Query 017052
Match_columns 378
No_of_seqs 137 out of 1493
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 05:11:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017052.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017052hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 3E-65 6.4E-70 441.5 33.1 370 7-376 2-375 (375)
2 COG1062 AdhC Zn-dependent alco 100.0 1.9E-65 4.2E-70 450.1 32.3 363 11-376 1-366 (366)
3 COG1064 AdhP Zn-dependent alco 100.0 8.1E-65 1.7E-69 456.6 31.9 332 10-377 1-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 2E-58 4.2E-63 402.3 30.6 340 11-378 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 4.4E-57 9.6E-62 392.7 30.3 344 7-377 4-355 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 7E-56 1.5E-60 421.3 36.2 373 4-376 2-381 (381)
7 PLN02827 Alcohol dehydrogenase 100.0 1.8E-55 3.9E-60 417.4 38.5 377 2-378 2-378 (378)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.5E-54 7.5E-59 407.8 37.5 363 13-376 2-368 (368)
9 cd08300 alcohol_DH_class_III c 100.0 1.1E-53 2.4E-58 404.6 37.4 364 11-375 1-368 (368)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 1.2E-53 2.5E-58 405.0 37.6 358 13-374 1-370 (371)
11 cd08301 alcohol_DH_plants Plan 100.0 2.2E-53 4.7E-58 403.1 37.5 364 11-374 1-368 (369)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.2E-53 9E-58 399.4 36.8 354 12-376 1-358 (358)
13 cd08277 liver_alcohol_DH_like 100.0 1.7E-52 3.7E-57 396.1 37.3 363 11-375 1-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 1.1E-51 2.5E-56 387.1 35.4 334 13-376 1-339 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 2.6E-50 5.6E-55 378.2 34.7 334 11-376 3-343 (343)
16 COG0604 Qor NADPH:quinone redu 100.0 2.1E-50 4.5E-55 372.3 31.4 311 13-376 1-326 (326)
17 TIGR02819 fdhA_non_GSH formald 100.0 1.5E-49 3.3E-54 377.6 33.8 343 12-377 2-391 (393)
18 PRK10309 galactitol-1-phosphat 100.0 6.5E-49 1.4E-53 369.5 35.5 337 13-377 1-347 (347)
19 PLN02586 probable cinnamyl alc 100.0 3.9E-49 8.4E-54 371.9 33.7 346 1-376 1-353 (360)
20 COG1063 Tdh Threonine dehydrog 100.0 1.6E-48 3.6E-53 364.4 33.7 340 13-376 1-350 (350)
21 cd08299 alcohol_DH_class_I_II_ 100.0 2.5E-47 5.4E-52 361.5 38.5 366 10-376 5-373 (373)
22 KOG1197 Predicted quinone oxid 100.0 2E-48 4.2E-53 327.1 25.4 314 8-377 4-331 (336)
23 cd08230 glucose_DH Glucose deh 100.0 9.2E-48 2E-52 362.7 32.5 331 13-376 1-355 (355)
24 TIGR03201 dearomat_had 6-hydro 100.0 1.4E-47 3.1E-52 360.4 33.7 331 16-376 2-349 (349)
25 PLN02178 cinnamyl-alcohol dehy 100.0 3E-47 6.5E-52 360.2 33.3 333 15-376 9-348 (375)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.4E-46 2.9E-51 350.5 32.0 318 15-374 1-328 (329)
27 cd08231 MDR_TM0436_like Hypoth 100.0 7.9E-46 1.7E-50 350.5 36.0 345 14-376 2-361 (361)
28 cd08233 butanediol_DH_like (2R 100.0 7.2E-46 1.6E-50 349.4 35.2 331 13-374 1-350 (351)
29 cd05279 Zn_ADH1 Liver alcohol 100.0 1.3E-45 2.8E-50 349.1 36.7 361 13-375 1-365 (365)
30 PLN02514 cinnamyl-alcohol dehy 100.0 1E-45 2.2E-50 348.6 34.5 339 11-378 8-352 (357)
31 cd08278 benzyl_alcohol_DH Benz 100.0 7.9E-45 1.7E-49 343.8 35.4 359 11-375 1-365 (365)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 6E-44 1.3E-48 336.4 35.7 339 13-376 1-351 (351)
33 cd08279 Zn_ADH_class_III Class 100.0 8.9E-44 1.9E-48 336.5 37.0 358 13-374 1-362 (363)
34 cd08237 ribitol-5-phosphate_DH 100.0 4.5E-45 9.8E-50 342.1 27.8 318 12-377 2-340 (341)
35 PRK10083 putative oxidoreducta 100.0 3.7E-43 8.1E-48 329.5 34.8 332 13-378 1-339 (339)
36 cd08238 sorbose_phosphate_red 100.0 2.4E-43 5.1E-48 338.2 33.7 328 11-377 1-369 (410)
37 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.8E-43 1.2E-47 329.6 35.4 333 13-374 1-350 (350)
38 cd08296 CAD_like Cinnamyl alco 100.0 6.5E-43 1.4E-47 326.9 33.7 327 13-375 1-333 (333)
39 cd05284 arabinose_DH_like D-ar 100.0 7.1E-43 1.5E-47 327.7 34.1 330 13-376 1-340 (340)
40 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.9E-43 4.2E-48 326.4 29.3 300 12-375 1-308 (308)
41 cd05278 FDH_like Formaldehyde 100.0 1.9E-42 4.1E-47 325.7 34.7 338 13-376 1-347 (347)
42 cd08283 FDH_like_1 Glutathione 100.0 2.7E-42 5.8E-47 328.7 35.2 351 13-376 1-386 (386)
43 cd08286 FDH_like_ADH2 formalde 100.0 5.8E-42 1.3E-46 322.1 34.6 334 13-376 1-345 (345)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 7.3E-42 1.6E-46 321.5 34.6 335 13-375 1-344 (345)
45 cd08240 6_hydroxyhexanoate_dh_ 100.0 1E-41 2.2E-46 321.1 33.4 334 13-376 1-350 (350)
46 PLN02702 L-idonate 5-dehydroge 100.0 2.4E-41 5.3E-46 320.1 35.9 336 11-375 16-363 (364)
47 cd08246 crotonyl_coA_red croto 100.0 1.8E-41 3.9E-46 324.2 33.7 338 9-375 9-392 (393)
48 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.9E-41 6.3E-46 319.9 34.8 356 13-375 1-367 (367)
49 cd08291 ETR_like_1 2-enoyl thi 100.0 8.9E-42 1.9E-46 318.1 30.1 306 13-375 1-324 (324)
50 PRK05396 tdh L-threonine 3-deh 100.0 6.2E-41 1.3E-45 314.7 34.8 334 13-377 1-341 (341)
51 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.5E-40 3.2E-45 311.6 35.4 330 13-376 1-337 (337)
52 cd08235 iditol_2_DH_like L-idi 100.0 1.5E-40 3.3E-45 312.3 35.1 332 13-375 1-343 (343)
53 cd08242 MDR_like Medium chain 100.0 1.1E-40 2.3E-45 310.2 33.7 318 13-376 1-319 (319)
54 cd08284 FDH_like_2 Glutathione 100.0 1.4E-40 3.1E-45 312.6 34.5 337 13-375 1-343 (344)
55 cd08287 FDH_like_ADH3 formalde 100.0 1.9E-40 4.1E-45 311.9 34.5 333 13-376 1-345 (345)
56 PRK13771 putative alcohol dehy 100.0 7.8E-41 1.7E-45 313.1 31.1 326 13-376 1-333 (334)
57 PLN03154 putative allyl alcoho 100.0 1.2E-40 2.7E-45 312.6 31.7 313 9-378 5-347 (348)
58 TIGR01751 crot-CoA-red crotony 100.0 1.9E-40 4.1E-45 317.3 33.5 340 9-377 4-388 (398)
59 cd08282 PFDH_like Pseudomonas 100.0 3.6E-40 7.8E-45 313.1 34.0 344 13-376 1-375 (375)
60 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.8E-40 8.3E-45 309.3 33.7 322 13-375 1-341 (341)
61 PRK09422 ethanol-active dehydr 100.0 6.2E-40 1.3E-44 307.5 33.8 332 13-377 1-337 (338)
62 cd05281 TDH Threonine dehydrog 100.0 9.7E-40 2.1E-44 306.5 34.8 333 13-376 1-341 (341)
63 cd05285 sorbitol_DH Sorbitol d 100.0 7.4E-40 1.6E-44 307.6 33.7 329 15-374 1-341 (343)
64 cd08236 sugar_DH NAD(P)-depend 100.0 1.2E-39 2.6E-44 306.2 34.5 334 13-374 1-343 (343)
65 cd08265 Zn_ADH3 Alcohol dehydr 100.0 9.9E-40 2.1E-44 310.9 34.2 333 13-374 29-383 (384)
66 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.4E-39 3E-44 304.9 33.8 331 13-376 1-338 (338)
67 cd05283 CAD1 Cinnamyl alcohol 100.0 1E-39 2.2E-44 305.9 32.5 331 14-375 1-337 (337)
68 cd08292 ETR_like_2 2-enoyl thi 100.0 7.2E-40 1.6E-44 305.2 31.2 306 13-375 1-324 (324)
69 cd08297 CAD3 Cinnamyl alcohol 100.0 3.2E-39 7E-44 303.0 35.0 331 13-376 1-341 (341)
70 KOG0025 Zn2+-binding dehydroge 100.0 4E-40 8.6E-45 282.0 26.0 314 9-376 16-352 (354)
71 cd08294 leukotriene_B4_DH_like 100.0 1E-39 2.3E-44 304.8 30.8 304 12-376 2-329 (329)
72 cd08295 double_bond_reductase_ 100.0 7.3E-40 1.6E-44 306.9 29.6 306 13-376 8-338 (338)
73 cd08259 Zn_ADH5 Alcohol dehydr 100.0 6.5E-39 1.4E-43 299.6 33.4 326 13-375 1-332 (332)
74 TIGR02825 B4_12hDH leukotriene 100.0 3.2E-39 6.9E-44 301.0 30.9 291 25-375 19-325 (325)
75 TIGR03366 HpnZ_proposed putati 100.0 6.3E-40 1.4E-44 299.1 24.9 269 66-357 1-280 (280)
76 cd08232 idonate-5-DH L-idonate 100.0 7.7E-39 1.7E-43 300.2 33.0 328 17-376 2-339 (339)
77 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-38 2.8E-43 298.4 33.6 332 13-376 1-342 (342)
78 cd08234 threonine_DH_like L-th 100.0 1.6E-38 3.4E-43 297.5 34.0 328 13-374 1-333 (334)
79 TIGR00692 tdh L-threonine 3-de 100.0 1.9E-38 4.2E-43 297.6 33.5 330 18-376 4-340 (340)
80 cd08293 PTGR2 Prostaglandin re 100.0 1E-38 2.2E-43 300.2 30.7 296 25-376 23-345 (345)
81 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.5E-38 3.3E-43 296.5 30.4 318 13-372 1-324 (325)
82 cd08298 CAD2 Cinnamyl alcohol 100.0 8.1E-38 1.8E-42 292.1 32.2 320 13-374 1-329 (329)
83 cd08245 CAD Cinnamyl alcohol d 100.0 1.3E-37 2.7E-42 290.9 31.6 325 14-374 1-330 (330)
84 cd08274 MDR9 Medium chain dehy 100.0 1E-37 2.3E-42 293.8 31.1 320 13-376 1-350 (350)
85 PRK10754 quinone oxidoreductas 100.0 2.9E-37 6.2E-42 288.1 29.9 311 12-375 1-326 (327)
86 cd08290 ETR 2-enoyl thioester 100.0 2.2E-37 4.7E-42 290.6 29.1 309 13-376 1-341 (341)
87 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.5E-37 9.8E-42 287.8 30.1 306 14-375 1-334 (336)
88 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.2E-36 2.6E-41 281.1 31.0 297 13-340 1-306 (306)
89 cd08250 Mgc45594_like Mgc45594 100.0 8.5E-37 1.8E-41 285.2 29.6 308 12-375 1-329 (329)
90 cd08244 MDR_enoyl_red Possible 100.0 2.1E-36 4.7E-41 281.7 32.2 309 13-376 1-324 (324)
91 cd08276 MDR7 Medium chain dehy 100.0 4.1E-36 8.8E-41 281.1 33.7 328 13-376 1-336 (336)
92 PTZ00354 alcohol dehydrogenase 100.0 3.8E-36 8.3E-41 281.1 32.4 310 12-377 1-329 (334)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.4E-35 3E-40 276.4 32.8 310 13-376 1-325 (325)
94 cd08270 MDR4 Medium chain dehy 100.0 6.7E-36 1.5E-40 276.1 30.1 297 13-376 1-305 (305)
95 cd08249 enoyl_reductase_like e 100.0 5.1E-36 1.1E-40 281.0 29.2 310 13-376 1-339 (339)
96 KOG1198 Zinc-binding oxidoredu 100.0 2.4E-36 5.3E-41 278.7 26.3 298 25-378 20-347 (347)
97 cd05282 ETR_like 2-enoyl thioe 100.0 2.1E-35 4.7E-40 274.9 29.9 295 25-375 14-323 (323)
98 cd08289 MDR_yhfp_like Yhfp put 100.0 5.2E-35 1.1E-39 272.7 30.3 311 13-376 1-326 (326)
99 cd08252 AL_MDR Arginate lyase 100.0 1.2E-34 2.6E-39 271.4 31.5 309 13-375 1-336 (336)
100 cd08243 quinone_oxidoreductase 100.0 7.9E-35 1.7E-39 270.5 29.5 308 13-374 1-319 (320)
101 cd08269 Zn_ADH9 Alcohol dehydr 100.0 3.3E-34 7.2E-39 265.6 31.8 298 20-374 3-311 (312)
102 TIGR02823 oxido_YhdH putative 100.0 3.2E-34 6.9E-39 267.1 31.7 308 14-376 1-323 (323)
103 cd08248 RTN4I1 Human Reticulon 100.0 1E-34 2.2E-39 273.4 25.7 308 13-375 1-350 (350)
104 COG2130 Putative NADP-dependen 100.0 2.9E-34 6.4E-39 248.5 25.3 296 25-378 27-340 (340)
105 cd05288 PGDH Prostaglandin deh 100.0 7E-34 1.5E-38 265.5 28.5 302 13-374 2-329 (329)
106 cd05276 p53_inducible_oxidored 100.0 2E-33 4.4E-38 260.7 31.3 306 13-374 1-323 (323)
107 cd08253 zeta_crystallin Zeta-c 100.0 2.1E-33 4.6E-38 261.0 31.4 313 13-376 1-325 (325)
108 cd08272 MDR6 Medium chain dehy 100.0 1.6E-33 3.5E-38 262.1 30.2 308 13-376 1-326 (326)
109 cd08288 MDR_yhdh Yhdh putative 100.0 3E-33 6.4E-38 260.7 31.3 309 13-376 1-324 (324)
110 cd05286 QOR2 Quinone oxidoredu 100.0 3.9E-33 8.6E-38 258.4 32.0 307 14-376 1-320 (320)
111 cd08247 AST1_like AST1 is a cy 100.0 4.5E-33 9.7E-38 262.5 31.6 313 13-376 1-352 (352)
112 cd08271 MDR5 Medium chain dehy 100.0 9.3E-33 2E-37 257.1 29.8 307 13-376 1-325 (325)
113 cd08273 MDR8 Medium chain dehy 100.0 8.7E-33 1.9E-37 258.2 29.5 302 14-374 2-330 (331)
114 cd08268 MDR2 Medium chain dehy 100.0 6.1E-32 1.3E-36 251.6 32.2 312 13-375 1-327 (328)
115 cd05188 MDR Medium chain reduc 100.0 1.1E-32 2.4E-37 249.8 26.4 265 39-336 1-270 (271)
116 TIGR02824 quinone_pig3 putativ 100.0 8.8E-32 1.9E-36 250.2 32.1 308 13-376 1-325 (325)
117 cd08251 polyketide_synthase po 100.0 4.9E-32 1.1E-36 249.5 29.0 289 32-374 2-303 (303)
118 cd08275 MDR3 Medium chain dehy 100.0 9.6E-31 2.1E-35 244.8 32.7 307 14-376 1-337 (337)
119 cd05289 MDR_like_2 alcohol deh 100.0 1.7E-31 3.6E-36 246.6 27.0 298 13-374 1-309 (309)
120 cd08241 QOR1 Quinone oxidoredu 100.0 5.8E-31 1.3E-35 244.3 30.8 306 13-375 1-323 (323)
121 cd08267 MDR1 Medium chain dehy 100.0 6.7E-31 1.5E-35 243.9 27.1 292 26-374 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.5E-30 3.2E-35 237.9 26.9 281 38-374 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.9E-30 4.1E-35 236.9 27.0 277 42-374 2-288 (288)
124 KOG1202 Animal-type fatty acid 100.0 1.1E-29 2.4E-34 249.8 16.1 290 25-377 1429-1742(2376)
125 cd08255 2-desacetyl-2-hydroxye 100.0 6.4E-28 1.4E-32 219.8 24.6 246 62-374 19-277 (277)
126 KOG1196 Predicted NAD-dependen 99.9 3.2E-25 6.8E-30 191.9 25.9 292 27-377 26-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 5.8E-23 1.3E-27 159.8 7.2 105 37-162 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.6E-16 3.5E-21 127.6 12.5 127 204-338 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.4 3.7E-12 8E-17 120.0 14.4 177 181-377 188-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 2.8E-11 6.2E-16 116.9 13.9 153 191-349 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.8E-12 3.9E-17 103.5 2.3 120 237-374 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 3.6E-07 7.7E-12 83.0 9.9 163 188-364 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 1.5E-06 3.2E-11 84.2 12.1 107 192-300 162-289 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.4 6.4E-06 1.4E-10 78.3 13.8 105 180-299 197-303 (425)
135 PRK08306 dipicolinate synthase 98.3 1.3E-05 2.7E-10 73.4 13.9 99 193-303 151-249 (296)
136 TIGR01035 hemA glutamyl-tRNA r 98.3 6.5E-08 1.4E-12 92.8 -2.7 160 66-276 89-253 (417)
137 TIGR00936 ahcY adenosylhomocys 98.2 1.9E-05 4.1E-10 74.7 12.4 103 181-298 181-285 (406)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.2 6.3E-06 1.4E-10 76.1 8.7 107 158-276 140-251 (311)
139 PLN02494 adenosylhomocysteinas 98.1 4.5E-05 9.7E-10 72.9 11.5 102 182-298 241-344 (477)
140 PRK00517 prmA ribosomal protei 98.0 7.7E-05 1.7E-09 66.7 12.2 130 147-297 78-215 (250)
141 PTZ00075 Adenosylhomocysteinas 97.9 0.00017 3.6E-09 69.3 12.7 126 158-298 217-344 (476)
142 TIGR00518 alaDH alanine dehydr 97.9 0.00012 2.5E-09 69.3 10.7 99 193-299 166-271 (370)
143 TIGR02853 spore_dpaA dipicolin 97.8 0.0003 6.5E-09 64.1 12.5 99 193-303 150-248 (287)
144 PRK08324 short chain dehydroge 97.8 0.00017 3.7E-09 74.1 11.0 113 147-272 386-507 (681)
145 PRK00045 hemA glutamyl-tRNA re 97.7 7.8E-05 1.7E-09 71.9 6.7 160 66-275 91-254 (423)
146 PRK12771 putative glutamate sy 97.7 6.6E-05 1.4E-09 75.4 6.0 79 190-274 133-233 (564)
147 COG4221 Short-chain alcohol de 97.7 0.00029 6.4E-09 61.1 9.0 79 193-273 5-91 (246)
148 PF01488 Shikimate_DH: Shikima 97.6 0.00023 5.1E-09 57.1 7.4 76 190-274 8-86 (135)
149 PF11017 DUF2855: Protein of u 97.5 0.014 3E-07 53.2 18.3 140 147-299 90-235 (314)
150 PRK05693 short chain dehydroge 97.5 0.0016 3.4E-08 59.0 11.9 77 195-273 2-82 (274)
151 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.002 4.4E-08 56.8 12.0 103 193-298 4-138 (238)
152 COG2518 Pcm Protein-L-isoaspar 97.4 0.0018 4E-08 55.1 10.0 105 177-294 58-168 (209)
153 TIGR00406 prmA ribosomal prote 97.4 0.00097 2.1E-08 60.9 8.9 97 191-297 157-261 (288)
154 COG2242 CobL Precorrin-6B meth 97.3 0.0025 5.5E-08 53.1 10.0 101 187-294 28-134 (187)
155 COG3967 DltE Short-chain dehyd 97.3 0.0014 3.1E-08 55.1 8.4 78 193-272 4-87 (245)
156 KOG1205 Predicted dehydrogenas 97.3 0.0037 8.1E-08 56.1 11.0 110 193-304 11-158 (282)
157 PRK05993 short chain dehydroge 97.2 0.0022 4.8E-08 58.2 9.7 78 193-272 3-85 (277)
158 PRK00377 cbiT cobalt-precorrin 97.2 0.0052 1.1E-07 52.8 11.2 102 187-294 34-144 (198)
159 COG0300 DltE Short-chain dehyd 97.2 0.0034 7.4E-08 55.9 10.0 80 191-273 3-94 (265)
160 PF13460 NAD_binding_10: NADH( 97.1 0.0037 7.9E-08 52.8 9.7 94 197-298 1-100 (183)
161 PRK06182 short chain dehydroge 97.1 0.0029 6.2E-08 57.3 9.4 79 193-273 2-84 (273)
162 PRK11705 cyclopropane fatty ac 97.1 0.0036 7.9E-08 59.5 10.3 113 173-295 147-267 (383)
163 KOG1209 1-Acyl dihydroxyaceton 97.1 0.0049 1.1E-07 52.2 9.5 80 193-273 6-91 (289)
164 COG1748 LYS9 Saccharopine dehy 97.1 0.007 1.5E-07 56.9 11.4 98 195-299 2-103 (389)
165 PRK13943 protein-L-isoaspartat 97.1 0.0058 1.3E-07 56.5 10.7 102 186-294 73-179 (322)
166 PRK07326 short chain dehydroge 97.0 0.011 2.3E-07 52.1 11.8 79 193-273 5-92 (237)
167 PRK12742 oxidoreductase; Provi 97.0 0.017 3.7E-07 50.8 12.7 77 193-273 5-85 (237)
168 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0045 9.7E-08 52.3 8.3 91 191-296 33-128 (178)
169 PF13241 NAD_binding_7: Putati 97.0 0.0012 2.5E-08 50.3 4.3 96 193-305 6-101 (103)
170 PF00670 AdoHcyase_NAD: S-aden 96.9 0.0082 1.8E-07 49.2 9.2 100 184-298 12-113 (162)
171 PRK07806 short chain dehydroge 96.9 0.013 2.9E-07 52.0 11.5 101 193-296 5-135 (248)
172 PRK08017 oxidoreductase; Provi 96.9 0.0064 1.4E-07 54.3 9.4 77 195-273 3-84 (256)
173 PLN03209 translocon at the inn 96.9 0.017 3.6E-07 57.2 12.7 47 187-234 73-120 (576)
174 PRK06139 short chain dehydroge 96.9 0.0046 1E-07 57.7 8.5 79 193-273 6-94 (330)
175 PRK08177 short chain dehydroge 96.8 0.0076 1.6E-07 52.8 9.1 77 195-273 2-81 (225)
176 PRK13940 glutamyl-tRNA reducta 96.8 0.0092 2E-07 57.2 10.2 80 188-276 175-255 (414)
177 PRK07060 short chain dehydroge 96.8 0.0093 2E-07 52.8 9.8 76 193-273 8-87 (245)
178 PRK08265 short chain dehydroge 96.8 0.016 3.5E-07 52.0 11.4 79 193-273 5-90 (261)
179 PRK07109 short chain dehydroge 96.8 0.014 3E-07 54.6 11.2 79 193-273 7-95 (334)
180 PRK04148 hypothetical protein; 96.8 0.0095 2.1E-07 47.2 8.5 97 188-294 11-108 (134)
181 PRK06057 short chain dehydroge 96.8 0.0089 1.9E-07 53.4 9.4 79 193-273 6-89 (255)
182 PRK07576 short chain dehydroge 96.8 0.02 4.4E-07 51.5 11.8 79 192-272 7-95 (264)
183 TIGR00438 rrmJ cell division p 96.7 0.024 5.3E-07 48.2 11.4 101 188-295 27-146 (188)
184 TIGR01470 cysG_Nterm siroheme 96.7 0.038 8.2E-07 47.7 12.5 113 193-316 8-121 (205)
185 PRK08628 short chain dehydroge 96.7 0.021 4.6E-07 51.0 11.4 79 193-273 6-93 (258)
186 TIGR02469 CbiT precorrin-6Y C5 96.7 0.02 4.3E-07 44.7 9.9 100 187-294 13-121 (124)
187 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.02 4.4E-07 55.8 12.0 79 193-273 209-294 (450)
188 PRK06841 short chain dehydroge 96.7 0.0094 2E-07 53.2 8.9 79 193-273 14-99 (255)
189 PRK06949 short chain dehydroge 96.7 0.0095 2.1E-07 53.2 8.9 80 192-273 7-96 (258)
190 PRK12828 short chain dehydroge 96.7 0.01 2.2E-07 52.2 9.0 79 193-273 6-92 (239)
191 PRK05872 short chain dehydroge 96.7 0.011 2.3E-07 54.4 9.2 79 193-273 8-95 (296)
192 PRK12829 short chain dehydroge 96.7 0.0084 1.8E-07 53.7 8.4 83 189-273 6-96 (264)
193 PRK12939 short chain dehydroge 96.7 0.023 5E-07 50.3 11.1 80 192-273 5-94 (250)
194 PLN02780 ketoreductase/ oxidor 96.7 0.013 2.8E-07 54.4 9.8 80 193-273 52-142 (320)
195 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.0077 1.7E-07 54.1 7.9 78 193-272 4-88 (262)
196 PRK07825 short chain dehydroge 96.6 0.011 2.5E-07 53.3 9.1 79 193-273 4-88 (273)
197 PRK07831 short chain dehydroge 96.6 0.014 3E-07 52.4 9.5 81 191-273 14-107 (262)
198 PF01262 AlaDh_PNT_C: Alanine 96.6 0.006 1.3E-07 51.0 6.5 102 194-298 20-142 (168)
199 PRK06200 2,3-dihydroxy-2,3-dih 96.6 0.0078 1.7E-07 54.1 7.7 79 193-273 5-90 (263)
200 TIGR01832 kduD 2-deoxy-D-gluco 96.6 0.014 3E-07 51.9 9.2 79 193-273 4-90 (248)
201 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.019 4.1E-07 47.8 9.3 97 172-298 22-119 (168)
202 PRK07814 short chain dehydroge 96.6 0.012 2.5E-07 53.0 8.8 79 193-273 9-97 (263)
203 PRK06953 short chain dehydroge 96.6 0.016 3.4E-07 50.6 9.4 77 195-273 2-80 (222)
204 PRK06180 short chain dehydroge 96.6 0.0088 1.9E-07 54.2 8.0 79 193-273 3-88 (277)
205 PRK12549 shikimate 5-dehydroge 96.6 0.02 4.3E-07 52.1 10.2 44 192-235 125-168 (284)
206 COG1179 Dinucleotide-utilizing 96.6 0.033 7.1E-07 48.4 10.7 105 193-299 29-157 (263)
207 PRK05866 short chain dehydroge 96.6 0.015 3.2E-07 53.3 9.4 79 193-273 39-127 (293)
208 PRK07231 fabG 3-ketoacyl-(acyl 96.6 0.0098 2.1E-07 52.8 8.1 79 193-273 4-91 (251)
209 PRK06718 precorrin-2 dehydroge 96.6 0.057 1.2E-06 46.5 12.3 111 193-316 9-121 (202)
210 PRK06128 oxidoreductase; Provi 96.5 0.027 6E-07 51.7 11.1 79 193-273 54-144 (300)
211 COG0169 AroE Shikimate 5-dehyd 96.5 0.0098 2.1E-07 53.7 7.6 45 192-236 124-168 (283)
212 PRK08339 short chain dehydroge 96.5 0.016 3.4E-07 52.2 9.1 79 193-273 7-95 (263)
213 COG4122 Predicted O-methyltran 96.5 0.034 7.3E-07 48.2 10.5 104 188-294 54-165 (219)
214 cd01078 NAD_bind_H4MPT_DH NADP 96.5 0.037 8E-07 47.3 10.8 76 192-274 26-108 (194)
215 PRK03369 murD UDP-N-acetylmura 96.5 0.019 4.2E-07 56.6 10.2 74 190-274 8-81 (488)
216 cd05311 NAD_bind_2_malic_enz N 96.5 0.044 9.6E-07 48.1 11.4 92 192-295 23-128 (226)
217 PRK06500 short chain dehydroge 96.5 0.017 3.8E-07 51.2 8.9 79 193-273 5-90 (249)
218 TIGR02356 adenyl_thiF thiazole 96.5 0.042 9.1E-07 47.4 10.9 102 193-296 20-144 (202)
219 PRK06719 precorrin-2 dehydroge 96.4 0.041 9E-07 45.3 10.3 102 193-308 12-113 (157)
220 PRK09291 short chain dehydroge 96.4 0.017 3.7E-07 51.6 8.8 73 194-272 2-82 (257)
221 PRK06484 short chain dehydroge 96.4 0.034 7.5E-07 55.3 11.7 80 192-273 267-353 (520)
222 COG2910 Putative NADH-flavin r 96.4 0.016 3.5E-07 48.1 7.3 96 196-299 2-108 (211)
223 PF06325 PrmA: Ribosomal prote 96.4 0.018 3.9E-07 52.5 8.4 126 156-299 128-263 (295)
224 PRK05867 short chain dehydroge 96.3 0.02 4.3E-07 51.1 8.7 79 193-273 8-96 (253)
225 PF12847 Methyltransf_18: Meth 96.3 0.0077 1.7E-07 46.3 5.2 93 193-293 1-109 (112)
226 PLN02366 spermidine synthase 96.3 0.035 7.6E-07 51.0 10.3 100 191-295 89-206 (308)
227 PRK07677 short chain dehydroge 96.3 0.019 4E-07 51.2 8.4 78 194-273 1-88 (252)
228 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.023 4.9E-07 50.5 9.0 78 193-272 4-91 (253)
229 PRK07904 short chain dehydroge 96.3 0.028 6E-07 50.3 9.5 81 191-273 5-97 (253)
230 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.0092 2E-07 58.3 6.9 94 187-298 27-126 (450)
231 PRK06196 oxidoreductase; Provi 96.3 0.024 5.1E-07 52.6 9.3 79 193-273 25-109 (315)
232 PF02353 CMAS: Mycolic acid cy 96.3 0.0094 2E-07 53.8 6.4 99 185-295 54-166 (273)
233 PRK06505 enoyl-(acyl carrier p 96.3 0.022 4.7E-07 51.6 8.8 79 193-273 6-95 (271)
234 PRK15116 sulfur acceptor prote 96.3 0.091 2E-06 47.2 12.4 105 193-299 29-157 (268)
235 PRK12481 2-deoxy-D-gluconate 3 96.3 0.021 4.6E-07 50.9 8.6 79 193-273 7-93 (251)
236 PRK07774 short chain dehydroge 96.3 0.025 5.4E-07 50.2 9.0 79 193-273 5-93 (250)
237 PRK07533 enoyl-(acyl carrier p 96.3 0.025 5.5E-07 50.7 9.0 78 193-272 9-97 (258)
238 PRK14027 quinate/shikimate deh 96.3 0.04 8.8E-07 50.1 10.3 44 192-235 125-168 (283)
239 PRK07523 gluconate 5-dehydroge 96.3 0.026 5.6E-07 50.4 9.1 79 193-273 9-97 (255)
240 PRK05653 fabG 3-ketoacyl-(acyl 96.3 0.025 5.4E-07 49.9 8.9 79 193-273 4-92 (246)
241 PRK13394 3-hydroxybutyrate deh 96.3 0.024 5.2E-07 50.7 8.8 79 193-273 6-94 (262)
242 PRK13942 protein-L-isoaspartat 96.3 0.052 1.1E-06 47.2 10.6 101 185-294 68-175 (212)
243 PRK06172 short chain dehydroge 96.3 0.025 5.4E-07 50.4 8.8 79 193-273 6-94 (253)
244 PRK07062 short chain dehydroge 96.3 0.021 4.6E-07 51.3 8.4 79 193-273 7-97 (265)
245 PRK09072 short chain dehydroge 96.3 0.031 6.7E-07 50.2 9.4 79 193-273 4-90 (263)
246 PRK05876 short chain dehydroge 96.2 0.026 5.7E-07 51.2 9.0 79 193-273 5-93 (275)
247 PRK14175 bifunctional 5,10-met 96.2 0.041 8.9E-07 49.7 9.9 95 173-298 137-233 (286)
248 COG0686 Ald Alanine dehydrogen 96.2 0.019 4.1E-07 51.6 7.5 98 195-299 169-272 (371)
249 PRK07024 short chain dehydroge 96.2 0.031 6.6E-07 50.0 9.3 78 194-273 2-88 (257)
250 PRK07502 cyclohexadienyl dehyd 96.2 0.043 9.3E-07 50.7 10.4 91 195-296 7-101 (307)
251 PRK06079 enoyl-(acyl carrier p 96.2 0.02 4.3E-07 51.1 8.0 78 193-272 6-92 (252)
252 PRK06483 dihydromonapterin red 96.2 0.037 8E-07 48.7 9.6 78 194-273 2-84 (236)
253 PRK06463 fabG 3-ketoacyl-(acyl 96.2 0.031 6.7E-07 49.9 9.2 79 193-273 6-89 (255)
254 PRK12823 benD 1,6-dihydroxycyc 96.2 0.022 4.7E-07 51.0 8.2 79 193-273 7-94 (260)
255 PRK00811 spermidine synthase; 96.2 0.029 6.4E-07 51.1 8.9 97 192-294 75-190 (283)
256 PRK07478 short chain dehydroge 96.2 0.027 5.8E-07 50.3 8.6 79 193-273 5-93 (254)
257 cd00755 YgdL_like Family of ac 96.2 0.071 1.5E-06 46.9 11.0 104 193-298 10-137 (231)
258 PRK00536 speE spermidine synth 96.2 0.019 4.2E-07 51.3 7.4 101 192-296 71-172 (262)
259 TIGR01809 Shik-DH-AROM shikima 96.2 0.016 3.6E-07 52.7 7.2 75 193-273 124-200 (282)
260 PRK06603 enoyl-(acyl carrier p 96.2 0.029 6.4E-07 50.3 8.8 79 192-272 6-95 (260)
261 PRK07890 short chain dehydroge 96.2 0.033 7.3E-07 49.7 9.1 80 192-273 3-92 (258)
262 PRK06194 hypothetical protein; 96.2 0.027 5.8E-07 51.3 8.6 79 193-273 5-93 (287)
263 PRK13944 protein-L-isoaspartat 96.2 0.038 8.2E-07 47.8 9.1 100 186-294 65-172 (205)
264 PRK07402 precorrin-6B methylas 96.2 0.11 2.4E-06 44.5 11.9 104 186-295 33-142 (196)
265 PRK06181 short chain dehydroge 96.1 0.032 7E-07 50.0 9.0 78 194-273 1-88 (263)
266 PRK14967 putative methyltransf 96.1 0.27 5.9E-06 43.0 14.6 97 187-294 30-158 (223)
267 PRK07063 short chain dehydroge 96.1 0.034 7.3E-07 49.8 9.0 79 193-273 6-96 (260)
268 KOG1201 Hydroxysteroid 17-beta 96.1 0.022 4.8E-07 51.1 7.5 80 192-273 36-124 (300)
269 PRK08589 short chain dehydroge 96.1 0.03 6.5E-07 50.6 8.7 79 193-273 5-92 (272)
270 PF01135 PCMT: Protein-L-isoas 96.1 0.0082 1.8E-07 51.9 4.7 104 185-296 64-174 (209)
271 PRK06179 short chain dehydroge 96.1 0.017 3.8E-07 52.0 7.1 77 193-273 3-83 (270)
272 KOG0725 Reductases with broad 96.1 0.027 5.9E-07 50.9 8.2 81 192-273 6-99 (270)
273 CHL00194 ycf39 Ycf39; Provisio 96.1 0.031 6.7E-07 51.8 8.9 95 196-297 2-111 (317)
274 PRK08267 short chain dehydroge 96.1 0.045 9.7E-07 49.0 9.7 77 195-273 2-87 (260)
275 PRK07454 short chain dehydroge 96.1 0.048 1E-06 48.1 9.8 80 192-273 4-93 (241)
276 PRK08594 enoyl-(acyl carrier p 96.1 0.067 1.5E-06 47.9 10.8 78 193-272 6-96 (257)
277 PRK08703 short chain dehydroge 96.1 0.024 5.3E-07 50.0 7.8 80 193-273 5-97 (239)
278 PRK09186 flagellin modificatio 96.1 0.04 8.6E-07 49.1 9.2 78 193-272 3-92 (256)
279 PRK06701 short chain dehydroge 96.1 0.08 1.7E-06 48.4 11.4 82 190-273 42-134 (290)
280 PRK09242 tropinone reductase; 96.1 0.035 7.7E-07 49.6 8.9 79 193-273 8-98 (257)
281 PRK06198 short chain dehydroge 96.1 0.031 6.6E-07 50.0 8.4 81 192-273 4-94 (260)
282 PRK06114 short chain dehydroge 96.1 0.035 7.5E-07 49.6 8.7 79 193-273 7-96 (254)
283 PRK06138 short chain dehydroge 96.1 0.033 7.2E-07 49.4 8.6 79 193-273 4-91 (252)
284 PRK12548 shikimate 5-dehydroge 96.1 0.051 1.1E-06 49.6 9.9 37 192-228 124-160 (289)
285 PRK05717 oxidoreductase; Valid 96.0 0.039 8.5E-07 49.2 9.0 79 193-273 9-94 (255)
286 PRK08213 gluconate 5-dehydroge 96.0 0.041 8.8E-07 49.2 9.0 79 193-273 11-99 (259)
287 PRK06482 short chain dehydroge 96.0 0.04 8.8E-07 49.8 9.1 77 195-273 3-86 (276)
288 PRK05875 short chain dehydroge 96.0 0.039 8.5E-07 49.8 9.0 78 193-272 6-95 (276)
289 TIGR01318 gltD_gamma_fam gluta 96.0 0.033 7.1E-07 54.7 9.0 77 193-274 140-237 (467)
290 PRK12826 3-ketoacyl-(acyl-carr 96.0 0.038 8.2E-07 49.0 8.6 79 193-273 5-93 (251)
291 PRK07832 short chain dehydroge 96.0 0.043 9.3E-07 49.5 9.1 77 195-273 1-88 (272)
292 cd01065 NAD_bind_Shikimate_DH 96.0 0.043 9.4E-07 44.9 8.3 74 192-274 17-92 (155)
293 COG2230 Cfa Cyclopropane fatty 96.0 0.12 2.6E-06 46.5 11.5 105 181-300 60-181 (283)
294 PRK12367 short chain dehydroge 96.0 0.043 9.2E-07 48.9 8.8 73 193-273 13-89 (245)
295 PRK06720 hypothetical protein; 96.0 0.053 1.1E-06 45.3 8.8 79 193-273 15-103 (169)
296 PRK08415 enoyl-(acyl carrier p 96.0 0.047 1E-06 49.5 9.2 103 193-298 4-146 (274)
297 COG2264 PrmA Ribosomal protein 96.0 0.081 1.8E-06 48.0 10.5 130 157-299 130-267 (300)
298 PF00106 adh_short: short chai 96.0 0.022 4.7E-07 47.1 6.5 78 195-273 1-90 (167)
299 PRK00107 gidB 16S rRNA methylt 96.0 0.064 1.4E-06 45.6 9.4 95 191-294 43-144 (187)
300 PRK07985 oxidoreductase; Provi 96.0 0.1 2.2E-06 47.8 11.6 79 192-272 47-137 (294)
301 PRK05854 short chain dehydroge 96.0 0.049 1.1E-06 50.4 9.5 79 193-273 13-103 (313)
302 PRK08993 2-deoxy-D-gluconate 3 96.0 0.044 9.5E-07 48.9 8.9 79 193-273 9-95 (253)
303 PRK12937 short chain dehydroge 96.0 0.11 2.3E-06 45.9 11.4 79 193-273 4-93 (245)
304 PRK08340 glucose-1-dehydrogena 95.9 0.048 1E-06 48.8 9.1 76 196-273 2-86 (259)
305 PRK08690 enoyl-(acyl carrier p 95.9 0.045 9.8E-07 49.1 8.9 80 192-273 4-94 (261)
306 PRK07856 short chain dehydroge 95.9 0.035 7.5E-07 49.5 8.1 75 193-273 5-85 (252)
307 PRK08226 short chain dehydroge 95.9 0.041 8.9E-07 49.3 8.6 79 193-273 5-92 (263)
308 KOG1207 Diacetyl reductase/L-x 95.9 0.029 6.3E-07 46.1 6.6 48 193-241 6-54 (245)
309 TIGR03206 benzo_BadH 2-hydroxy 95.9 0.048 1E-06 48.3 8.9 78 193-272 2-89 (250)
310 PRK12809 putative oxidoreducta 95.9 0.038 8.2E-07 56.5 9.2 76 193-274 309-406 (639)
311 PRK08251 short chain dehydroge 95.9 0.046 9.9E-07 48.5 8.7 77 194-272 2-90 (248)
312 COG2226 UbiE Methylase involve 95.9 0.084 1.8E-06 46.4 10.0 104 187-299 45-160 (238)
313 PRK05884 short chain dehydroge 95.9 0.063 1.4E-06 47.0 9.5 74 196-272 2-78 (223)
314 PRK08643 acetoin reductase; Va 95.9 0.043 9.3E-07 49.0 8.6 78 194-273 2-89 (256)
315 PRK07035 short chain dehydroge 95.9 0.047 1E-06 48.6 8.8 79 193-273 7-95 (252)
316 PRK08263 short chain dehydroge 95.9 0.033 7.2E-07 50.4 7.9 78 194-273 3-87 (275)
317 PLN02253 xanthoxin dehydrogena 95.9 0.043 9.4E-07 49.7 8.6 79 193-273 17-104 (280)
318 cd01483 E1_enzyme_family Super 95.9 0.12 2.7E-06 41.7 10.4 99 196-297 1-123 (143)
319 PRK06125 short chain dehydroge 95.9 0.084 1.8E-06 47.2 10.4 77 193-273 6-91 (259)
320 PRK07074 short chain dehydroge 95.9 0.057 1.2E-06 48.2 9.3 78 194-273 2-87 (257)
321 PRK06124 gluconate 5-dehydroge 95.9 0.054 1.2E-06 48.3 9.0 79 193-273 10-98 (256)
322 PRK07453 protochlorophyllide o 95.8 0.053 1.2E-06 50.3 9.2 78 193-272 5-92 (322)
323 PRK06914 short chain dehydroge 95.8 0.064 1.4E-06 48.5 9.5 78 193-273 2-91 (280)
324 PRK06935 2-deoxy-D-gluconate 3 95.8 0.054 1.2E-06 48.4 8.9 79 193-273 14-101 (258)
325 COG0373 HemA Glutamyl-tRNA red 95.8 0.079 1.7E-06 50.3 10.1 79 187-275 171-250 (414)
326 PRK07067 sorbitol dehydrogenas 95.8 0.059 1.3E-06 48.1 9.1 79 193-273 5-90 (257)
327 PRK08219 short chain dehydroge 95.8 0.078 1.7E-06 46.1 9.7 75 194-273 3-81 (227)
328 PRK12429 3-hydroxybutyrate deh 95.8 0.047 1E-06 48.6 8.4 79 193-273 3-91 (258)
329 PRK06197 short chain dehydroge 95.8 0.06 1.3E-06 49.6 9.3 78 193-272 15-104 (306)
330 PRK07984 enoyl-(acyl carrier p 95.8 0.062 1.3E-06 48.4 9.2 78 193-272 5-93 (262)
331 PRK08264 short chain dehydroge 95.8 0.041 8.9E-07 48.5 7.9 75 193-273 5-83 (238)
332 PLN02476 O-methyltransferase 95.8 0.08 1.7E-06 47.7 9.6 104 187-294 112-227 (278)
333 PF03435 Saccharop_dh: Sacchar 95.8 0.067 1.5E-06 51.1 9.8 90 197-293 1-96 (386)
334 PRK08618 ornithine cyclodeamin 95.8 0.17 3.7E-06 47.1 12.2 95 192-299 125-225 (325)
335 PRK08085 gluconate 5-dehydroge 95.8 0.063 1.4E-06 47.8 9.1 79 193-273 8-96 (254)
336 PRK08303 short chain dehydroge 95.8 0.058 1.3E-06 49.7 9.0 78 193-272 7-105 (305)
337 PRK07791 short chain dehydroge 95.8 0.072 1.6E-06 48.6 9.6 80 192-273 4-102 (286)
338 PRK08862 short chain dehydroge 95.7 0.075 1.6E-06 46.7 9.2 78 193-272 4-92 (227)
339 PRK08159 enoyl-(acyl carrier p 95.7 0.074 1.6E-06 48.1 9.4 81 190-272 6-97 (272)
340 PRK12384 sorbitol-6-phosphate 95.7 0.056 1.2E-06 48.3 8.5 78 194-273 2-91 (259)
341 PRK06398 aldose dehydrogenase; 95.7 0.037 7.9E-07 49.6 7.2 74 193-273 5-82 (258)
342 PRK07577 short chain dehydroge 95.7 0.05 1.1E-06 47.7 8.0 74 193-273 2-78 (234)
343 PRK12747 short chain dehydroge 95.7 0.22 4.8E-06 44.2 12.2 38 193-231 3-42 (252)
344 PRK06484 short chain dehydroge 95.7 0.049 1.1E-06 54.2 8.7 79 193-273 4-89 (520)
345 PRK08277 D-mannonate oxidoredu 95.7 0.066 1.4E-06 48.5 8.9 78 193-272 9-96 (278)
346 PRK10538 malonic semialdehyde 95.7 0.069 1.5E-06 47.4 8.9 76 196-273 2-84 (248)
347 PRK07666 fabG 3-ketoacyl-(acyl 95.7 0.068 1.5E-06 47.1 8.8 80 193-273 6-94 (239)
348 TIGR02355 moeB molybdopterin s 95.6 0.085 1.8E-06 46.7 9.2 36 193-228 23-58 (240)
349 COG1648 CysG Siroheme synthase 95.6 0.081 1.7E-06 45.7 8.7 113 193-316 11-124 (210)
350 TIGR00080 pimt protein-L-isoas 95.6 0.15 3.2E-06 44.4 10.6 103 185-294 69-176 (215)
351 PRK12936 3-ketoacyl-(acyl-carr 95.6 0.078 1.7E-06 46.8 9.1 79 193-273 5-90 (245)
352 TIGR01963 PHB_DH 3-hydroxybuty 95.6 0.067 1.5E-06 47.5 8.7 78 194-273 1-88 (255)
353 PRK06101 short chain dehydroge 95.6 0.096 2.1E-06 46.3 9.5 75 195-272 2-80 (240)
354 PRK06077 fabG 3-ketoacyl-(acyl 95.6 0.21 4.6E-06 44.2 11.8 103 193-298 5-143 (252)
355 PRK04457 spermidine synthase; 95.5 0.19 4.2E-06 45.1 11.3 96 192-293 65-175 (262)
356 PRK12475 thiamine/molybdopteri 95.5 0.095 2.1E-06 49.0 9.5 36 193-228 23-58 (338)
357 PRK12743 oxidoreductase; Provi 95.5 0.078 1.7E-06 47.3 8.8 78 194-273 2-90 (256)
358 PRK07688 thiamine/molybdopteri 95.5 0.087 1.9E-06 49.2 9.3 35 193-227 23-57 (339)
359 PRK07574 formate dehydrogenase 95.5 0.13 2.7E-06 48.9 10.3 46 193-239 191-236 (385)
360 PRK08945 putative oxoacyl-(acy 95.5 0.065 1.4E-06 47.5 8.2 83 190-273 8-102 (247)
361 PRK01581 speE spermidine synth 95.5 0.22 4.8E-06 46.5 11.6 100 191-296 148-269 (374)
362 PRK14192 bifunctional 5,10-met 95.5 0.11 2.4E-06 47.1 9.5 84 185-298 149-234 (283)
363 PRK08278 short chain dehydroge 95.5 0.07 1.5E-06 48.2 8.3 79 193-273 5-100 (273)
364 PRK11207 tellurite resistance 95.4 0.049 1.1E-06 46.7 6.8 98 187-295 24-134 (197)
365 PRK05650 short chain dehydroge 95.4 0.082 1.8E-06 47.6 8.6 77 195-273 1-87 (270)
366 PRK06113 7-alpha-hydroxysteroi 95.4 0.081 1.8E-06 47.2 8.5 79 193-273 10-98 (255)
367 cd01075 NAD_bind_Leu_Phe_Val_D 95.4 0.29 6.2E-06 42.1 11.4 81 192-285 26-107 (200)
368 PF02558 ApbA: Ketopantoate re 95.4 0.0092 2E-07 48.7 2.0 95 197-296 1-102 (151)
369 TIGR02622 CDP_4_6_dhtase CDP-g 95.4 0.039 8.4E-07 51.9 6.5 75 193-273 3-85 (349)
370 PRK08317 hypothetical protein; 95.4 0.16 3.4E-06 44.6 10.2 101 186-295 12-124 (241)
371 PF02670 DXP_reductoisom: 1-de 95.4 0.23 5.1E-06 39.2 9.8 86 197-286 1-113 (129)
372 TIGR00507 aroE shikimate 5-deh 95.4 0.12 2.6E-06 46.8 9.4 71 191-273 114-188 (270)
373 PRK07102 short chain dehydroge 95.4 0.14 3E-06 45.2 9.8 76 195-273 2-86 (243)
374 PRK08063 enoyl-(acyl carrier p 95.4 0.097 2.1E-06 46.4 8.8 79 193-273 3-92 (250)
375 PRK05690 molybdopterin biosynt 95.4 0.11 2.3E-06 46.3 8.8 35 193-227 31-65 (245)
376 cd00757 ThiF_MoeB_HesA_family 95.4 0.17 3.7E-06 44.5 10.1 101 193-296 20-144 (228)
377 PRK05562 precorrin-2 dehydroge 95.4 0.43 9.3E-06 41.6 12.2 113 193-316 24-137 (223)
378 PRK12769 putative oxidoreducta 95.3 0.07 1.5E-06 54.8 8.7 76 192-273 325-422 (654)
379 PRK08644 thiamine biosynthesis 95.3 0.12 2.5E-06 44.9 8.8 35 193-227 27-61 (212)
380 PRK06849 hypothetical protein; 95.3 0.54 1.2E-05 44.9 14.3 78 193-272 3-85 (389)
381 PLN00141 Tic62-NAD(P)-related 95.3 0.1 2.2E-06 46.6 8.6 102 191-297 14-133 (251)
382 PF00899 ThiF: ThiF family; I 95.3 0.084 1.8E-06 42.2 7.3 98 194-295 2-124 (135)
383 PRK08328 hypothetical protein; 95.3 0.13 2.8E-06 45.4 9.0 35 193-227 26-60 (231)
384 PRK07097 gluconate 5-dehydroge 95.3 0.12 2.6E-06 46.4 9.1 79 193-273 9-97 (265)
385 PRK07370 enoyl-(acyl carrier p 95.2 0.093 2E-06 47.0 8.2 79 193-273 5-97 (258)
386 PRK12550 shikimate 5-dehydroge 95.2 0.093 2E-06 47.4 8.1 70 189-272 117-187 (272)
387 PRK12938 acetyacetyl-CoA reduc 95.2 0.074 1.6E-06 47.1 7.5 79 193-273 2-91 (246)
388 COG0421 SpeE Spermidine syntha 95.2 0.22 4.8E-06 45.1 10.5 97 195-294 78-189 (282)
389 PLN00203 glutamyl-tRNA reducta 95.2 0.16 3.4E-06 50.2 10.2 73 193-274 265-340 (519)
390 PRK06940 short chain dehydroge 95.2 0.12 2.7E-06 46.7 9.0 77 194-273 2-86 (275)
391 TIGR02415 23BDH acetoin reduct 95.2 0.12 2.6E-06 46.0 8.7 77 195-273 1-87 (254)
392 PRK08762 molybdopterin biosynt 95.2 0.1 2.2E-06 49.7 8.6 35 193-227 134-168 (376)
393 PLN03139 formate dehydrogenase 95.2 0.2 4.3E-06 47.6 10.4 46 193-239 198-243 (386)
394 PF02254 TrkA_N: TrkA-N domain 95.1 0.3 6.4E-06 37.7 9.9 74 197-275 1-74 (116)
395 PRK05557 fabG 3-ketoacyl-(acyl 95.1 0.13 2.8E-06 45.4 8.8 79 193-273 4-93 (248)
396 PRK06523 short chain dehydroge 95.1 0.09 2E-06 47.0 7.9 75 193-272 8-86 (260)
397 PLN02781 Probable caffeoyl-CoA 95.1 0.2 4.3E-06 44.3 9.8 104 187-294 62-177 (234)
398 COG2227 UbiG 2-polyprenyl-3-me 95.1 0.19 4.2E-06 43.8 9.3 95 192-294 58-160 (243)
399 PLN02657 3,8-divinyl protochlo 95.1 0.17 3.6E-06 48.5 10.0 81 190-273 56-146 (390)
400 PRK07775 short chain dehydroge 95.1 0.14 3.1E-06 46.2 9.2 79 193-273 9-97 (274)
401 PRK15469 ghrA bifunctional gly 95.1 0.14 3.1E-06 47.2 9.1 37 193-230 135-171 (312)
402 PRK06997 enoyl-(acyl carrier p 95.1 0.12 2.7E-06 46.3 8.6 79 193-273 5-94 (260)
403 PLN02823 spermine synthase 95.1 0.19 4.2E-06 46.8 9.9 99 193-294 103-219 (336)
404 PF01596 Methyltransf_3: O-met 95.1 0.051 1.1E-06 46.8 5.7 101 190-295 42-155 (205)
405 PRK07424 bifunctional sterol d 95.0 0.13 2.8E-06 49.3 8.9 74 193-273 177-255 (406)
406 PRK13243 glyoxylate reductase; 95.0 0.17 3.6E-06 47.3 9.4 37 193-230 149-185 (333)
407 COG2519 GCD14 tRNA(1-methylade 95.0 0.19 4.2E-06 44.1 9.0 102 187-296 88-196 (256)
408 PRK08220 2,3-dihydroxybenzoate 95.0 0.11 2.4E-06 46.1 7.9 74 193-273 7-86 (252)
409 TIGR03840 TMPT_Se_Te thiopurin 94.9 0.25 5.4E-06 42.9 9.7 103 191-297 32-154 (213)
410 PRK08416 7-alpha-hydroxysteroi 94.9 0.15 3.4E-06 45.6 8.8 78 193-272 7-96 (260)
411 PF03807 F420_oxidored: NADP o 94.9 0.87 1.9E-05 33.7 11.4 75 196-283 1-80 (96)
412 COG0569 TrkA K+ transport syst 94.9 0.23 4.9E-06 43.6 9.3 74 196-274 2-77 (225)
413 cd01492 Aos1_SUMO Ubiquitin ac 94.9 0.29 6.2E-06 42.0 9.8 100 193-295 20-142 (197)
414 KOG1014 17 beta-hydroxysteroid 94.9 0.23 5.1E-06 44.9 9.4 80 192-273 47-136 (312)
415 PF03446 NAD_binding_2: NAD bi 94.8 0.19 4.2E-06 41.6 8.5 89 195-297 2-96 (163)
416 PRK08936 glucose-1-dehydrogena 94.8 0.18 3.9E-06 45.1 9.0 80 192-273 5-95 (261)
417 PRK07340 ornithine cyclodeamin 94.8 0.15 3.2E-06 47.0 8.5 95 192-299 123-221 (304)
418 PF05368 NmrA: NmrA-like famil 94.8 0.14 3E-06 45.0 8.1 70 197-272 1-73 (233)
419 PRK12745 3-ketoacyl-(acyl-carr 94.8 0.15 3.3E-06 45.3 8.5 77 195-273 3-90 (256)
420 COG3288 PntA NAD/NADP transhyd 94.8 0.37 8E-06 43.5 10.4 130 189-321 159-309 (356)
421 PRK06171 sorbitol-6-phosphate 94.8 0.08 1.7E-06 47.5 6.7 76 193-273 8-87 (266)
422 cd01487 E1_ThiF_like E1_ThiF_l 94.8 0.15 3.3E-06 42.7 7.8 33 196-228 1-33 (174)
423 PLN02986 cinnamyl-alcohol dehy 94.8 0.16 3.5E-06 47.0 8.8 39 193-232 4-43 (322)
424 PRK14188 bifunctional 5,10-met 94.8 0.24 5.2E-06 45.1 9.5 94 173-298 137-233 (296)
425 KOG1502 Flavonol reductase/cin 94.8 0.18 3.9E-06 46.2 8.7 73 193-272 5-87 (327)
426 PRK07792 fabG 3-ketoacyl-(acyl 94.8 0.2 4.4E-06 46.1 9.3 79 193-273 11-99 (306)
427 TIGR02354 thiF_fam2 thiamine b 94.8 0.28 6E-06 42.2 9.4 35 193-227 20-54 (200)
428 PRK09135 pteridine reductase; 94.7 0.22 4.8E-06 43.9 9.2 78 193-272 5-94 (249)
429 PRK12825 fabG 3-ketoacyl-(acyl 94.7 0.2 4.2E-06 44.1 8.8 78 193-272 5-93 (249)
430 PLN03075 nicotianamine synthas 94.7 0.22 4.8E-06 45.3 9.0 97 193-294 123-232 (296)
431 TIGR01289 LPOR light-dependent 94.7 0.21 4.5E-06 46.2 9.2 79 193-273 2-91 (314)
432 PRK05600 thiamine biosynthesis 94.7 0.22 4.7E-06 47.2 9.3 35 193-227 40-74 (370)
433 PRK05565 fabG 3-ketoacyl-(acyl 94.7 0.2 4.3E-06 44.2 8.8 78 194-273 5-93 (247)
434 TIGR02632 RhaD_aldol-ADH rhamn 94.7 0.15 3.3E-06 52.5 8.9 79 193-273 413-503 (676)
435 PRK07417 arogenate dehydrogena 94.7 0.3 6.6E-06 44.3 10.0 66 196-273 2-67 (279)
436 PRK05708 2-dehydropantoate 2-r 94.7 0.17 3.7E-06 46.6 8.5 97 195-295 3-104 (305)
437 PRK00258 aroE shikimate 5-dehy 94.6 0.16 3.5E-06 46.1 8.1 74 192-273 121-195 (278)
438 PLN02928 oxidoreductase family 94.6 0.24 5.3E-06 46.5 9.5 97 192-296 157-263 (347)
439 PRK12935 acetoacetyl-CoA reduc 94.6 0.22 4.7E-06 44.0 8.8 79 193-273 5-94 (247)
440 PRK05597 molybdopterin biosynt 94.6 0.3 6.5E-06 46.0 10.0 36 193-228 27-62 (355)
441 KOG1610 Corticosteroid 11-beta 94.6 0.8 1.7E-05 41.6 12.0 107 192-300 27-169 (322)
442 PLN02730 enoyl-[acyl-carrier-p 94.5 0.47 1E-05 43.7 11.0 37 192-230 7-46 (303)
443 PRK09134 short chain dehydroge 94.5 0.21 4.6E-06 44.6 8.7 79 193-273 8-97 (258)
444 PLN02589 caffeoyl-CoA O-methyl 94.5 0.32 7E-06 43.2 9.5 101 188-293 74-188 (247)
445 PRK14194 bifunctional 5,10-met 94.5 0.31 6.7E-06 44.4 9.5 94 173-297 138-233 (301)
446 PRK07889 enoyl-(acyl carrier p 94.5 0.19 4E-06 45.0 8.2 79 193-273 6-95 (256)
447 PF01113 DapB_N: Dihydrodipico 94.5 0.38 8.2E-06 37.8 8.9 92 196-299 2-101 (124)
448 PRK05447 1-deoxy-D-xylulose 5- 94.5 0.45 9.7E-06 44.9 10.7 97 195-293 2-120 (385)
449 PRK13656 trans-2-enoyl-CoA red 94.5 0.21 4.5E-06 47.1 8.4 80 192-274 39-142 (398)
450 TIGR01505 tartro_sem_red 2-hyd 94.4 0.5 1.1E-05 43.2 11.0 43 196-239 1-43 (291)
451 PF01370 Epimerase: NAD depend 94.4 0.099 2.2E-06 45.8 6.2 72 197-273 1-75 (236)
452 PLN02686 cinnamoyl-CoA reducta 94.4 0.23 5E-06 47.1 8.9 45 191-236 50-95 (367)
453 PRK14103 trans-aconitate 2-met 94.4 0.65 1.4E-05 41.5 11.4 96 186-294 22-125 (255)
454 TIGR01829 AcAcCoA_reduct aceto 94.4 0.26 5.6E-06 43.3 8.8 77 195-273 1-88 (242)
455 TIGR00477 tehB tellurite resis 94.3 0.21 4.6E-06 42.7 7.8 98 187-295 24-133 (195)
456 cd05191 NAD_bind_amino_acid_DH 94.3 0.43 9.2E-06 34.8 8.4 35 192-226 21-55 (86)
457 PRK10637 cysG siroheme synthas 94.3 0.19 4.1E-06 49.1 8.4 113 193-316 11-124 (457)
458 PLN02520 bifunctional 3-dehydr 94.3 0.17 3.8E-06 50.3 8.2 71 193-273 378-449 (529)
459 PRK10669 putative cation:proto 94.3 0.3 6.5E-06 49.1 10.0 75 195-274 418-492 (558)
460 PRK12480 D-lactate dehydrogena 94.2 0.46 1E-05 44.3 10.3 86 193-296 145-235 (330)
461 PRK03562 glutathione-regulated 94.2 0.3 6.4E-06 49.7 9.8 78 194-276 400-477 (621)
462 PRK05855 short chain dehydroge 94.2 0.2 4.4E-06 50.3 8.7 79 193-273 314-402 (582)
463 PRK13255 thiopurine S-methyltr 94.2 0.37 8E-06 42.0 9.0 101 190-294 34-154 (218)
464 PRK12744 short chain dehydroge 94.2 0.25 5.5E-06 44.0 8.3 79 193-273 7-99 (257)
465 PLN02989 cinnamyl-alcohol dehy 94.2 0.26 5.7E-06 45.7 8.7 38 193-231 4-42 (325)
466 PLN02896 cinnamyl-alcohol dehy 94.1 0.36 7.7E-06 45.4 9.6 41 191-232 7-48 (353)
467 PRK12746 short chain dehydroge 94.1 0.27 5.9E-06 43.6 8.5 79 193-273 5-100 (254)
468 PRK07201 short chain dehydroge 94.1 0.22 4.8E-06 51.1 8.8 79 193-273 370-458 (657)
469 PF02719 Polysacc_synt_2: Poly 94.1 0.33 7.2E-06 44.0 8.7 74 197-272 1-86 (293)
470 PRK01438 murD UDP-N-acetylmura 94.1 0.34 7.4E-06 47.7 9.7 69 193-273 15-88 (480)
471 TIGR03215 ac_ald_DH_ac acetald 94.1 0.72 1.6E-05 41.9 10.9 89 196-296 3-95 (285)
472 PRK06947 glucose-1-dehydrogena 94.1 0.28 6E-06 43.4 8.3 76 195-272 3-89 (248)
473 PF02882 THF_DHG_CYH_C: Tetrah 94.1 0.33 7.1E-06 40.0 7.9 95 172-297 14-110 (160)
474 PRK14191 bifunctional 5,10-met 94.0 0.44 9.6E-06 43.1 9.4 95 173-298 136-232 (285)
475 PRK14982 acyl-ACP reductase; P 94.0 0.27 5.8E-06 45.8 8.2 93 192-297 153-248 (340)
476 PRK11559 garR tartronate semia 94.0 0.47 1E-05 43.5 9.9 44 195-239 3-46 (296)
477 PF08704 GCD14: tRNA methyltra 94.0 0.13 2.7E-06 45.7 5.8 106 185-296 32-147 (247)
478 TIGR00417 speE spermidine synt 94.0 0.66 1.4E-05 41.9 10.7 101 192-295 71-186 (270)
479 cd05212 NAD_bind_m-THF_DH_Cycl 94.0 0.6 1.3E-05 37.5 9.2 95 173-298 7-103 (140)
480 TIGR00715 precor6x_red precorr 94.0 0.16 3.6E-06 45.3 6.5 73 196-273 2-75 (256)
481 PRK08300 acetaldehyde dehydrog 94.0 0.6 1.3E-05 42.6 10.2 93 195-296 5-101 (302)
482 PRK11036 putative S-adenosyl-L 94.0 0.75 1.6E-05 41.1 10.9 93 192-294 43-148 (255)
483 PLN02653 GDP-mannose 4,6-dehyd 94.0 0.14 3E-06 47.9 6.4 37 192-229 4-41 (340)
484 PRK12824 acetoacetyl-CoA reduc 94.0 0.35 7.6E-06 42.5 8.8 77 195-273 3-90 (245)
485 PRK06153 hypothetical protein; 93.9 0.67 1.5E-05 43.6 10.6 35 193-227 175-209 (393)
486 PRK08223 hypothetical protein; 93.9 0.3 6.6E-06 44.2 8.1 36 193-228 26-61 (287)
487 PRK08642 fabG 3-ketoacyl-(acyl 93.9 0.38 8.3E-06 42.6 9.0 78 193-272 4-90 (253)
488 PRK03659 glutathione-regulated 93.9 0.37 8.1E-06 48.8 9.8 93 195-293 401-496 (601)
489 PRK10792 bifunctional 5,10-met 93.9 0.43 9.4E-06 43.1 9.1 94 173-297 138-233 (285)
490 PRK05599 hypothetical protein; 93.9 0.38 8.1E-06 42.7 8.9 75 196-273 2-87 (246)
491 PRK08287 cobalt-precorrin-6Y C 93.9 0.76 1.6E-05 38.9 10.4 97 187-294 25-130 (187)
492 PRK06522 2-dehydropantoate 2-r 93.9 0.38 8.2E-06 44.1 9.1 93 196-294 2-99 (304)
493 TIGR00563 rsmB ribosomal RNA s 93.9 0.55 1.2E-05 45.5 10.5 102 187-295 232-368 (426)
494 PRK12827 short chain dehydroge 93.8 0.41 8.9E-06 42.2 9.0 79 193-273 5-97 (249)
495 cd01484 E1-2_like Ubiquitin ac 93.8 0.79 1.7E-05 40.4 10.4 33 196-228 1-33 (234)
496 TIGR03589 PseB UDP-N-acetylglu 93.8 0.22 4.8E-06 46.3 7.4 75 193-273 3-84 (324)
497 PRK09730 putative NAD(P)-bindi 93.8 0.36 7.9E-06 42.5 8.6 77 195-273 2-89 (247)
498 PRK07411 hypothetical protein; 93.8 0.37 7.9E-06 46.1 8.9 36 193-228 37-72 (390)
499 PRK12859 3-ketoacyl-(acyl-carr 93.8 0.39 8.5E-06 42.8 8.8 80 192-273 4-106 (256)
500 COG1090 Predicted nucleoside-d 93.8 0.11 2.4E-06 46.2 4.9 66 197-274 1-67 (297)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-65 Score=441.47 Aligned_cols=370 Identities=55% Similarity=0.995 Sum_probs=353.4
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCC
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+..++++||++.+++++||.++++..++|+.+||+||+.++++|++|...|.|.. .+|.++|||.+|+|+.+|..|.
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 3467899999999999999999999999999999999999999999999999874 6799999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
.+++||+|+..+...|+.|.+|+++..|.|....... .+..+.||..||+.+|+++||+.+..+|+||.+++...+.+|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 9999999999999999999999999999999998877 566656999999999999999999999999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
+++.+++.++.+.|.+.|+|.|.+..+.+++|++|.|.|-|++|+++++-||..|++++|+++.+++|.+.++++|+++.
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~ 241 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEF 241 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
+|..+......+.+.+.|++++|+-|||+|..+.+.+++.++.++||+-+.+|.......+.+.++.++++.++.|+.++
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG 321 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG 321 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence 99875445688999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.|+++.+++.+++.+.++++.++.+|++++|++++++||+.|.+++.+|-||.+
T Consensus 322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999888764
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.9e-65 Score=450.15 Aligned_cols=363 Identities=46% Similarity=0.833 Sum_probs=343.7
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
+++||++..++++||+++++++++|+++||+||+.++|+|++|.....|.. .+|.++|||.+|+|++||+.|+++++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCC
Confidence 468999999999999999999999999999999999999999999999987 789999999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
|+|+..+...|+.|..|++|++|+|....-.. .|.. .||+.++...+++++++.+.++|+||.++++..++++++.++
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 99999999999999999999999999655443 5644 899999999999999999999999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
++.++.+.|...|.+.+....+++++|++|.|.|.|++|++++|-|+..|+.++|+++.+++|++++++||+++++|..+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999873
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
.. +..+.+.+++++++|++|||+|....++.++.++.+ ||+.+.+|.......+++++..+..+.+++|++++.-.++
T Consensus 240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 22 699999999999999999999999999999999999 6999999998888888899999888999999999988888
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.++++++++..+|++++++++++.++|+||+|||+.+.+++.+|-||++
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 9999999999999999999999999999999999999999999888865
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8.1e-65 Score=456.58 Aligned_cols=332 Identities=31% Similarity=0.462 Sum_probs=300.2
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCC
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
+++|||++++++++|+++.+++.|+|+|+||+|+|+|+|+|++|++.+.|.. .+|++||||++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 4789999999999999999999999999999999999999999999999987 6899999999999999999999999
Q ss_pred CCCEEEe-ecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 87 EGEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 87 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
+||||.+ ++..+|+.|.+|++|+++.|++....++. ..|+|+||+++|++++++||++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~---------------------~~GGyaeyv~v~~~~~~~iP~~ 139 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT---------------------TDGGYAEYVVVPARYVVKIPEG 139 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccccee---------------------ecCcceeEEEEchHHeEECCCC
Confidence 9999988 89999999999999999999997764322 2369999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++||.+.|+..|+|++| +..++++|++|+|+|+|++|++++|+|+++|+ +|++++++++|++.+++||++++++.
T Consensus 140 ~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~ 217 (339)
T COG1064 140 LDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS 217 (339)
T ss_pred CChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEc
Confidence 99999999999999999998 66999999999999999999999999999998 99999999999999999999999988
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~ 324 (378)
+ +.+..+.+++. +|+++|+++ +..+..+++.|+++ |+++.+|.........++.. .+++++++.|+..+.
T Consensus 218 ~--~~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 218 S--DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred C--CchhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-
Confidence 6 56666666653 999999999 78999999999997 99999999852233334444 345799999998876
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
+.+.++++++..++++++. +.+.++++++++|++.|++++.. |+||.+.
T Consensus 289 --~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 --RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred --HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 5689999999999998776 44799999999999999999997 9999875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-58 Score=402.31 Aligned_cols=340 Identities=26% Similarity=0.421 Sum_probs=300.7
Q ss_pred cceeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
.+|+|+++++++. +++.+.|+|++ .|+||+|++.++|||++|++.|.... ..|.++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4689999999996 99999999986 99999999999999999999998766 4799999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
.+++||||.+.|..+|+.|..|++|+||.|....+...+.. .|++++|++.+++.++|+|
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~--------------------~G~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPV--------------------DGTLAEYYVHPADFCYKLP 141 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCc--------------------CCceEEEEEechHheeeCC
Confidence 99999999999999999999999999999999988654422 3699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
|++|+|++|.+. +++++|+|. ++++++.|.+|||+|||++|+.++..||.+|+.+|++++..++|+++++++|++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 799999997 899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCC--chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEee
Q 017052 244 NPNDNN--EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320 (378)
Q Consensus 244 ~~~~~~--~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
+..... ..+.+.+....+. .+|+.|||+|....++.++..++.+ |+++.+|+.....++++.... .+++.+.|++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v~-~kE~~~~g~f 297 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDVA-LKEVDLRGSF 297 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhhh-hheeeeeeee
Confidence 776322 3444555555544 6999999999988899999999997 999999887655555544443 5688888886
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeCCC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHMPK 378 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~~~ 378 (378)
-+- ..+++.+++++.+|++.++++|++.|+++++.+||+.+..+.. +|++|..++
T Consensus 298 ry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 298 RYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 432 3489999999999999999999999999999999999988774 499998764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.4e-57 Score=392.74 Aligned_cols=344 Identities=25% Similarity=0.405 Sum_probs=303.7
Q ss_pred cccccceeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCC
Q 017052 7 QPQVITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~ 81 (378)
...|.+.++|.+..+++ ++++.+++.|+++++||+|+|+|+|||++|++.+.|.. .+|.++|||++|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 45788999999999998 57779999999999999999999999999999999877 78999999999999999999
Q ss_pred CCcCCCCCEE-EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 82 VTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 82 v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
|++|++|||| +.....+|.+|.+|.+++++.|.+......|+. .||+ .++|+|++|+++++.+++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DGt-------------~~~ggf~~~~~v~~~~a~ 149 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDGT-------------ITQGGFQEYAVVDEVFAI 149 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCCC-------------CccCccceeEEEeeeeEE
Confidence 9999999999 667788999999999999999998887777777 6663 346899999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGV 239 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~ 239 (378)
+||++++.+.||.+.|+..|.|.+| .+.++.||++|-|.|+|++|.+++|+||++|. +|++++++. +|.+.++.||+
T Consensus 150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence 9999999999999999999999998 88899999999999997799999999999999 999998887 77888888999
Q ss_pred cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEe
Q 017052 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 319 (378)
Q Consensus 240 ~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 319 (378)
+.+++..+ +.++.+.+...+++++|-|.+. ..-.++.++.+++.+ |++|.+|.+.....++..+.. +..++|.|+
T Consensus 228 d~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~~~~~~~~~li-l~~~~I~GS 302 (360)
T KOG0023|consen 228 DVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEKPLKLDTFPLI-LGRKSIKGS 302 (360)
T ss_pred ceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCCcccccchhhh-cccEEEEee
Confidence 99888753 6788899998887777777765 335788999999998 999999998763333333332 568889999
Q ss_pred eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 320 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
..++ +.+.+++++++.++.+... | +..+++++++|++.++.++.. |.||.+.
T Consensus 303 ~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 303 IVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred cccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 8877 4689999999999998776 3 788999999999999999997 9999865
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=7e-56 Score=421.27 Aligned_cols=373 Identities=52% Similarity=0.975 Sum_probs=310.7
Q ss_pred ccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeC
Q 017052 4 SIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVG 79 (378)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG 79 (378)
|.++|+|++|||+++.++++++++++.+.|.|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|
T Consensus 2 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG 81 (381)
T PLN02740 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVG 81 (381)
T ss_pred ccccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeC
Confidence 5678899999999999999889999999999999999999999999999999988753 458899999999999999
Q ss_pred CCCCcCCCCCEEEeecccCCCCCcccccCCCCCccccccccccc-ccCCCcccccc--cCCcccccccccceeeEEEEeC
Q 017052 80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV-MHSDQQTRFSI--KGKPVYHYCAVSSFSEYTVVHS 156 (378)
Q Consensus 80 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~-~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~v~~ 156 (378)
+++..|++||||++.+..+|+.|.+|..++++.|........+. ...+|..+++. .+...++....|+|+||+++|.
T Consensus 82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 99999999999999999999999999999999999865321100 00011100000 0011111223479999999999
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
+.++++|++++++++|.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.+++
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999998788899999999999999999999999999999669999999999999999
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+|+++++++++.+.++.+.+++++.+++|++||++|++..+..++.++++++|+++.+|.......+++.+..+++++++
T Consensus 242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 321 (381)
T PLN02740 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321 (381)
T ss_pred cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence 99999998763223577788887766899999999987889999999987449999999875433455555444568899
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.|+..+.+....+++++++++.++++++.++++++|+++++++|++.+.+++..|++|++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 988776554345688999999999998888899999999999999999988878999874
No 7
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.8e-55 Score=417.45 Aligned_cols=377 Identities=81% Similarity=1.363 Sum_probs=309.7
Q ss_pred CcccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCC
Q 017052 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~ 81 (378)
|+|.++|....|||++++++++.+++++++.|.|+++||+|||.++|||++|++.+.+...+|.++|||++|+|+++|++
T Consensus 2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCCCCCeeecccceEEEEEcCCC
Confidence 45677888899999999998877999999999999999999999999999999988775457889999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+++|++||+|++.+..+|+.|..|++|.++.|........|..+.++...+...|...++....|+|+||+.+|++.+++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~ 161 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence 99999999999999899999999999999999875322112110000000000000000011237999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++++.+++++.++|+++++.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|+++
T Consensus 162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 99999999999999899999998877788999999999999999999999999999966888988999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
++++++.+.++.+.+++++.+++|+|||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|+..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 99876322467777888776689999999998778899999999844999999986543222222223457889999877
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 378 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~~ 378 (378)
..+....++.++++++.++++++.++++++|+++++++|++.+++++..|+||.+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence 655444578899999999999987789999999999999999999888899999874
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3.5e-54 Score=407.81 Aligned_cols=363 Identities=48% Similarity=0.895 Sum_probs=298.3
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++...++++++++++.|+|+++||+|||+++|+|++|++.+.|.. .+|.++|||++|+|+++|+.+.+|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 8999999998889999999999999999999999999999999888754 4588999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCccccccc-ccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
||++.+..+|+.|..|+.|+++.|...... ..|+. .+|..++...|...++..+.|+|+||+.+|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999998999999999999999999874321 11221 1221111111111122123479999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++|.+++++.|||+++.+++++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|+++++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998788899999999999999999999999999999679999999999999999999999987632
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
+.++.+.+++++.+++|++|||+|++..+..+++++++++|+++.+|.......+.+.+..+..+..+.++.........
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 34567778888777899999999987788999999987449999999764333333333333344456666544333345
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++.++++++.+++++++++++++|+|+++++|++.+++++..|++|++
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 689999999999998888899999999999999999888777999875
No 9
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-53 Score=404.63 Aligned_cols=364 Identities=50% Similarity=0.955 Sum_probs=301.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
.+|||+++.+.++++++++.|.|.|+++||+|||+++|+|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 368999999998889999999999999999999999999999999887754 46889999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCccccccc-ccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+..+|+.|.+|++++++.|...... +.|.. .+|..++...|...++..+.|+|+||+.++++.++++|+++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 99999998999999999999999999875321 11221 12211111222222222235799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++++.|||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~ 239 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999999987888999999999999999999999999999996699999999999999999999999886
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+.+.++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|.......+.+.+..+..+.++.++..+.+..
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKS 319 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCc
Confidence 32235778888887778999999999877889999999874599999997643233343443334455677776655554
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
.+++.++++++.++++++.++++++|+|+++++||+.+++++..|++|+
T Consensus 320 ~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 320 RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 5678999999999999988889999999999999999998887799885
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.2e-53 Score=404.97 Aligned_cols=358 Identities=36% Similarity=0.653 Sum_probs=297.8
Q ss_pred eeeEEeecCCC--------CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCC
Q 017052 13 CKAAVAWGAGQ--------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 13 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v 82 (378)
|||+++.++|. .+++++.+.|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v 80 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGV 80 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCC
Confidence 89999999763 38999999999999999999999999999999988854 468899999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
.+|++||||++.+..+|+.|..|++|+++.|....... .|.. .+|...+...+....+..+.|+|+||+.+|++.+++
T Consensus 81 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 81 TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 99999999998888899999999999999998764321 1111 111100000000001111236999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++|+.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999999878889999999999999999999999999999966999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL 320 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 320 (378)
++++. +.++.+.+++++++++|++|||+|.+..+..++++++++ |+++.+|.......+.+....+ .+++++.|++
T Consensus 240 ~i~~~--~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 240 TVNAG--DPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred EeCCC--chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 99886 567788888887768999999999878899999999997 9999999765333344444433 4688999987
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
...+...++++++++++.++++++..+++++|+++++++||+.+++++..|.||
T Consensus 317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 665443457889999999999998888999999999999999999998884443
No 11
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.2e-53 Score=403.07 Aligned_cols=364 Identities=62% Similarity=1.128 Sum_probs=304.3
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
++|||+++.+++++++++++++|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 479999999998889999999999999999999999999999999888754 46889999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||||+..+..+|+.|..|+.|+++.|....... .|....++...+...|...+++...|+|+||+.+++..++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999999999999999999999999998864321 1111001111111112222222234799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++.+.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999988888999999999999999999999999999986799999999999999999999998875
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+.+..+.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+++.+..+++++++.|+....+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 32245777788877668999999999877888999999983399999998764334455544445689999987766554
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
+.+++++++++.++.+++.++++++|+++++++||+.+++++..|++|
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 557889999999999988888899999999999999999998889887
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.2e-53 Score=399.40 Aligned_cols=354 Identities=32% Similarity=0.554 Sum_probs=298.2
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
+|||+++.++++++++++.+.|+|+++||+|||.++|+|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++||
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCC
Confidence 69999999999889999999999999999999999999999999888753 5688999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|..|.+|+++.|........+....+|. ........|+|+||+.+|++.++++|++++++
T Consensus 81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~--------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~ 152 (358)
T TIGR03451 81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPA 152 (358)
T ss_pred EEEEccCCCCCCChHHhCcCcccCcCccccccccccccCc--------ccccccccccccceEEEehhheEECCCCCChh
Confidence 9999999999999999999999998532211000000110 00000123799999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+|+.+++.+.++|+++.+.+.+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|+++++++. .
T Consensus 153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~--~ 230 (358)
T TIGR03451 153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--G 230 (358)
T ss_pred HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC--C
Confidence 99999999999999887788899999999999999999999999999995699999999999999999999999886 5
Q ss_pred chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCCcC
Q 017052 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 327 (378)
.++.+.+++++++ ++|++|||+|++..+..++.+++++ |+++.+|.......++++.. .+.+++++.+++.......
T Consensus 231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 309 (358)
T TIGR03451 231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPE 309 (358)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcH
Confidence 5777888888877 8999999999877889999999997 99999998654333444432 3345788887765433234
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++++++++++.++++++..+++++|+++++++|++.+++++..|++|.+
T Consensus 310 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 310 RDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred HHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 5788999999999998888899999999999999999998878888763
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.7e-52 Score=396.09 Aligned_cols=363 Identities=53% Similarity=0.982 Sum_probs=304.6
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
+.|||+++.+.+++++++++|.|.++++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++|
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCC
Confidence 468999999988889999999999999999999999999999999988754 567899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|++.+..+|+.|..|.+|.++.|........|.. .++...++..|+..++..+.|+|+||+.++.+.++++|+++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCccccccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 999998899999999999999999988654433433 3332222222322222223579999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++++++..+.
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~ 239 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc
Confidence 99999999999999998788899999999999999999999999999999679999999999999999999999887532
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
+..+.+.+++++.+++|+||||+|+...+..+++++++++|+++.+|.... ...++.+..+..++++.+++.+.+....
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 318 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRS 318 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHH
Confidence 234567777777668999999999877888999999874499999997653 2334444444458888888776654445
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
+++++++++.++.+++.++++++|+++++++|++.+++++..|++|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 78899999999999888889999999999999999998886799874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.1e-51 Score=387.12 Aligned_cols=334 Identities=29% Similarity=0.452 Sum_probs=288.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++. +++++.+.|.|+++||+|||.++++|++|++.+.+.+ .+|.++|||++|+|+++|++++.|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998764 9999999999999999999999999999998876643 257899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|+..+..+|+.|..|+.|+.+.|..... ..|.. ..|+|+||+.+|.+.++++|+++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~-------------------~~G~~ae~~~v~~~~~~~~P~~~~~ 139 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWN-------------------RDGGHAEYMLVPEKTLIPLPDDLSF 139 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccC-------------------CCCcceeEEEechHHeEECCCCCCH
Confidence 999999999999999999999999986542 12221 2369999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++|+.+++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++++++++
T Consensus 140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~-- 216 (339)
T cd08239 140 ADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG-- 216 (339)
T ss_pred HHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC--
Confidence 99999999999999998 667899999999999999999999999999994499999999999999999999999886
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+.+ .+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|++... .
T Consensus 217 ~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~ 290 (339)
T cd08239 217 QDD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---V 290 (339)
T ss_pred cch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---H
Confidence 344 6677777777 8999999999977778899999997 99999997643 22332223345688998876543 3
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
+++.++++++.++.+++.++++++|+++++++||+.++++...|++|++
T Consensus 291 ~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 291 PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 5789999999999998888899999999999999999887756999875
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.6e-50 Score=378.21 Aligned_cols=334 Identities=22% Similarity=0.358 Sum_probs=275.0
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccc-cCC-----CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..+||++++++++ +++++.+.| ++++||+|||.++|||++|++.+. |.. .+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4578999998887 999999987 689999999999999999998874 321 46899999999999999 6789
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||+..+..+|+.|.+|+.|+++.|..... .|.. . +.....|+|+||++++++.++++|+
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~-~-------------~~~~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF--FGSA-M-------------YFPHVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce--eecc-c-------------ccCCCCCceeeeEEechHHeEECCC
Confidence 9999999999999999999999999999987543 1211 0 0001136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++. ..++++||+++ +.....+|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++++++
T Consensus 143 ~l~~~~aa~-~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~ 220 (343)
T PRK09880 143 KADEKVMAF-AEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220 (343)
T ss_pred CCCHHHHHh-hcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence 999987664 45778999998 4556678999999999999999999999999977999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
++ +.++.+.. +. .+++|+||||+|++..+..++++++++ |+++.+|.......+++. ..+.+++++.++...
T Consensus 221 ~~--~~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~k~~~i~g~~~~-- 292 (343)
T PRK09880 221 PQ--NDDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPEFPMM-TLIVKEISLKGSFRF-- 292 (343)
T ss_pred CC--cccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHHhCCcEEEEEeec--
Confidence 86 33443322 21 236999999999877889999999997 999999975443333322 122568888887642
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.++++++++++.++++++.++++++|+++++++|++.+++++.. |++|.+
T Consensus 293 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 --TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred --cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 35799999999999998888889999999999999999888765 999864
No 16
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.1e-50 Score=372.27 Aligned_cols=311 Identities=27% Similarity=0.363 Sum_probs=262.9
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.| +++++.|.|.|+++||+|||++++||+.|.....|.. ++|.++|.|++|+|+++|+.|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999999987 8899999999999999999999999999999998853 4899999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||+... ..| ..|+|+||+.+|++.++++|+++
T Consensus 81 ~GdrV~~~~-~~~--------------------------------------------~~G~~AEy~~v~a~~~~~~P~~l 115 (326)
T COG0604 81 VGDRVAALG-GVG--------------------------------------------RDGGYAEYVVVPADWLVPLPDGL 115 (326)
T ss_pred CCCEEEEcc-CCC--------------------------------------------CCCcceeEEEecHHHceeCCCCC
Confidence 999998873 100 12699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
|+++||++++++.|||++|....++++|++|||+|+ |++|++++||||++|+ .++++++++++.++++++|++++++|
T Consensus 116 s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y 194 (326)
T COG0604 116 SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194 (326)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 999999999999999999999899999999999987 9999999999999998 67777777888889999999999999
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
+ +.+|.+.+++++++ ++|+|||++|+ +.+..++++++++ |+++.+|...+.....++...+ .+.++..+.....
T Consensus 195 ~--~~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 270 (326)
T COG0604 195 R--EEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS 270 (326)
T ss_pred C--cccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence 8 66799999999999 99999999998 6888899999998 9999999887422333332222 3466666665543
Q ss_pred C---CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHH--HHHhhcCcee-EEEEeC
Q 017052 324 W---KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQA--FNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A--~~~l~~~~~~-kvvi~~ 376 (378)
. ...+.+.++.+++.++.+++. ++++||+++..++ +..++ ++.. |+||++
T Consensus 271 ~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~-~~~~GKvvl~~ 326 (326)
T COG0604 271 RDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLE-RRTTGKVVLKV 326 (326)
T ss_pred cchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcc-cCCcceEEEeC
Confidence 2 112456779999999997776 7789999995444 44444 4555 999874
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.5e-49 Score=377.58 Aligned_cols=343 Identities=23% Similarity=0.347 Sum_probs=272.9
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCC-------CCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQ-------PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v 82 (378)
.|||+++.++++ +++++++.|.|+ +|||||||+++|||++|++.+.|.. .+|.++|||++|+|+++|++|
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCcc
Confidence 589999998885 999999999874 6899999999999999999998854 568999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccc----cccccCCCcccccccCCcccccccccceeeEEEEeCC-
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 157 (378)
.+|++||||++.+..+|+.|..|++|+++.|....... .|.. ..| ...|+|+||+++|+.
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV-DMG--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc-ccC--------------CCCCceEEEEEechhh
Confidence 99999999999999999999999999999999753210 1111 000 013699999999964
Q ss_pred -ceeeCCCCCCh----hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 158 -CAVKVSSIAPL----EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 158 -~~~~iP~~l~~----~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
.++++|++++. ++++.+.+.+.++|+++ .+.++++|++|||.|+|++|++++|+|+.+|++.+++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 35677788899999987 5678999999999888999999999999999965677778899999
Q ss_pred HHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCCh--------------HHHHHHHHHhccCCccEEEeccC
Q 017052 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT--------------GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 233 ~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+++++|++. +++.. ..++.+.+.+++.+ ++|++||++|.+ ..+..++++++++ |+++.+|.+
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~ 301 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY 301 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence 999999975 44431 34566778887776 899999999985 4799999999997 999999986
Q ss_pred CCCCeee-----------ccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCccee-eeeccccHHHHHHHh
Q 017052 298 KLKPEVA-----------AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLM 364 (378)
Q Consensus 298 ~~~~~~~-----------~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~i~~A~~~l 364 (378)
....... +.... ..++.++.+.. ....+.+.++++++.++++++..+++ ++|+|+++++||+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~ 378 (393)
T TIGR02819 302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEF 378 (393)
T ss_pred CCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHH
Confidence 3211111 11111 12234444421 11112346899999999999887776 789999999999999
Q ss_pred hcCceeEEEEeCC
Q 017052 365 KEGKCLRSVIHMP 377 (378)
Q Consensus 365 ~~~~~~kvvi~~~ 377 (378)
.++...|++|.+.
T Consensus 379 ~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 379 DAGAAKKFVIDPH 391 (393)
T ss_pred hhCCceEEEEeCC
Confidence 9887779999874
No 18
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=6.5e-49 Score=369.52 Aligned_cols=337 Identities=24% Similarity=0.368 Sum_probs=281.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCccccccc-c-cCCCCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAW-E-TQAIFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~-~-g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++++++. +++++.+.|.| +++||+|||.++++|++|+..+ . +...+|.++|||++|+|+++|+++.+|++||
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd 79 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGD 79 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 79999999875 99999999997 5999999999999999998753 2 2125688999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|.+|..|.++.|..... .|.. ..|+|+||+.+|++.++++|++++++
T Consensus 80 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-------------------~~G~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 80 AVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSR-------------------RDGGNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred EEEECCCcCCCCCcchhCcCcccCCCcce--eccC-------------------CCCccceeEEeehHHeEECcCCCCHH
Confidence 99999999999999999999999976432 1211 13699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+. .+.++|+++ +...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++++++++ .
T Consensus 139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~--~ 214 (347)
T PRK10309 139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR--E 214 (347)
T ss_pred Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc--c
Confidence 998874 456688875 677889999999999999999999999999995588999999999999999999998876 3
Q ss_pred chHHHHHHHHhCC-Ccc-EEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc-c-cccccccEEEEeeeccCC
Q 017052 250 EPVQQVIKRITDG-GAD-YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~ 325 (378)
.+ .+.+.+++.+ ++| ++|||+|+...+..++++++++ |+++.+|.......++.. . ..+.+++++.|++.....
T Consensus 215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 292 (347)
T PRK10309 215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSS 292 (347)
T ss_pred cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccC
Confidence 33 4456666666 888 9999999877889999999997 999999976542222211 1 223468899988764321
Q ss_pred --cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 --PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
..++++++++++.++.+++.++++++|+|+++++|++.+.+++.. |++++++
T Consensus 293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred CcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 135788999999999998888899999999999999999988765 9999874
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.9e-49 Score=371.91 Aligned_cols=346 Identities=22% Similarity=0.335 Sum_probs=281.4
Q ss_pred CCcccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEE
Q 017052 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVES 77 (378)
Q Consensus 1 m~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~ 77 (378)
|..|+.+--|+.++++.+.+.++.+++.+.+.|.|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 6777777788889999998887779999999999999999999999999999999887753 4588999999999999
Q ss_pred eCCCCCcCCCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC
Q 017052 78 VGPGVTEFNEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 156 (378)
+|+++.+|++||+|++.+ ..+|+.|.+|++|+++.|........+.. .+|. ...|+|+||+++|+
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g~-------------~~~G~~aey~~v~~ 146 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG-HDGT-------------KNYGGYSDMIVVDQ 146 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccc-cCCC-------------cCCCccceEEEEch
Confidence 999999999999998654 45799999999999999987543211000 0010 01369999999999
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHH
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAK 235 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l~ 235 (378)
+.++++|++++++++|.+++...|+|+++.+...+++|++|||.|+|++|++++|+|+.+|+ ++++++.++++ .+.++
T Consensus 147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~ 225 (360)
T PLN02586 147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAIN 225 (360)
T ss_pred HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHH
Confidence 99999999999999999999999999998666667899999999999999999999999999 77777666555 56778
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-cccc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGR 314 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 314 (378)
++|+++++++. +. +.+.+.++ ++|++||++|.+..+..++++++++ |+++.+|....... ++...+ .++.
T Consensus 226 ~~Ga~~vi~~~--~~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~--~~~~~~~~~~~ 296 (360)
T PLN02586 226 RLGADSFLVST--DP---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLE--LPIFPLVLGRK 296 (360)
T ss_pred hCCCcEEEcCC--CH---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCc--cCHHHHHhCCe
Confidence 89999998765 22 23444443 6999999999877888999999997 99999997643223 333322 3466
Q ss_pred EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 315 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.++..+. ..+++++++++.++++++. + ++|+|+++++||+.+++++.. |++|++
T Consensus 297 ~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 297 LVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 666665432 3468999999999998764 4 589999999999999998876 999976
No 20
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=364.39 Aligned_cols=340 Identities=29% Similarity=0.398 Sum_probs=277.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCc-ccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR-IFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~-~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|++++++.++...++++.+.|.+.|+||+|||.++|||+||++.+.+.. ..|. ++|||++|+|+++| .+..|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 6788888777645577777777899999999999999999999999965 3444 89999999999999 77789999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee-CCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK-VSSIAP 167 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-iP~~l~ 167 (378)
|||.+.+..+|+.|.+|+.|.++.|.+... .|.....+ ...|+|+||+.+|.++.++ +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~--~g~~~~~~--------------~~~G~~aEyv~vp~~~~~~~~pd~~- 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGF--YGYAGLGG--------------GIDGGFAEYVRVPADFNLAKLPDGI- 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccc--cccccccC--------------CCCCceEEEEEeccccCeecCCCCC-
Confidence 999999999999999999999999995432 22220000 0136999999999755555 58998
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~ 246 (378)
..+++++..+++++|++.......+++.+|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ ++++.+++..
T Consensus 143 ~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~ 222 (350)
T COG1063 143 DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPS 222 (350)
T ss_pred ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCc
Confidence 566666667999998774455556666699999999999999999999999999999999999999999 6666666654
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeeeccC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~ 324 (378)
..+....+.+.+.+ ++|++|||+|.+..+..++++++++ |+++.+|....... .+.. ..+.+++++.|+....
T Consensus 223 --~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~~- 297 (350)
T COG1063 223 --EDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRPS- 297 (350)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCCC-
Confidence 22677788888888 9999999999988899999999997 99999999876442 2322 3335799999884311
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
...+++.+++++.+|++++..++++.++++++++|++.+.+... .|++|++
T Consensus 298 -~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 298 -GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 23579999999999999999999999999999999999988554 4999864
No 21
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.5e-47 Score=361.49 Aligned_cols=366 Identities=49% Similarity=0.888 Sum_probs=297.4
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
..+|||.++..+++++++++.|.|++.++||+|||+++|+|++|++.+.|.. .+|.++|||++|+|+++|+++..|++
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCCC
Confidence 3569999999998889999999999999999999999999999999988754 56789999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+..+|+.|.+|++++++.|+...... .|.. ..++.+.+..|.+..+..+.|+|+||++++.+.++++|+++
T Consensus 85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999999888999999999999999998753210 1111 11111222222222222235799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++++.+||+++.....+++|++|||+|+|++|++++++|+.+|+++|+++++++++.+.++++|++++++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 99999999999999999987888999999999998899999999999999986799999999999999999999998875
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+...++.+.+.+++.+++|+++||+|++..+..++..+.+.+|+++.+|.......+.+.+..+.++.++.++..+.+..
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence 32234667777776668999999999767777777765432499999997654334555554445677888887766544
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..++.++++.+.++.+++.+++.+.|+++++++|++.+++++..|+++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 45677888888888777777788999999999999999988777988864
No 22
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2e-48 Score=327.13 Aligned_cols=314 Identities=23% Similarity=0.266 Sum_probs=273.1
Q ss_pred ccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCC
Q 017052 8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v 82 (378)
..|+..|-+++++.|.+ +++.+.|.|+|+|+|++||-.|+|+|..|.-...|.+ +.|++||.|.+|+|+.+|+.+
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 45777899999999976 8899999999999999999999999999999888887 678999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
+++++||||.... ..|.|+|++.+|...++++
T Consensus 84 tdrkvGDrVayl~------------------------------------------------~~g~yaee~~vP~~kv~~v 115 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN------------------------------------------------PFGAYAEEVTVPSVKVFKV 115 (336)
T ss_pred cccccccEEEEec------------------------------------------------cchhhheeccccceeeccC
Confidence 9999999998762 1369999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
|+.+++++||++.+.++|||..+++...+++|++|||+.| |++|++++|+++..|+ .+|++.++.+|++.+++.|+++
T Consensus 116 pe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h 194 (336)
T KOG1197|consen 116 PEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEH 194 (336)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999966 9999999999999999 9999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-CeeeccccccccccEEEEe
Q 017052 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGS 319 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~ 319 (378)
.|+++ .+++.+.+++++++ |+|+++|.+|. +.+...+.+|++. |++|.+|+.+.. .++++.... .+.+++...
T Consensus 195 ~I~y~--~eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls-~k~l~lvrp 269 (336)
T KOG1197|consen 195 PIDYS--TEDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLS-PKALQLVRP 269 (336)
T ss_pred eeecc--chhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhcC-hhhhhhccH
Confidence 99998 88999999999988 99999999998 7899999999997 999999987753 233332222 224443333
Q ss_pred -eeccCCcCCc----HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 320 -LFGGWKPKTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 320 -~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.+++...+.+ ..+++.++.++.+++. |+++||++++.+|+..+++.... |+++...
T Consensus 270 sl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 270 SLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred hhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 3332222222 3467788889998777 99999999999999999999887 9998754
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=9.2e-48 Score=362.68 Aligned_cols=331 Identities=23% Similarity=0.332 Sum_probs=262.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++...+.+++++++|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 7899998655449999999999999999999999999999999988754 24679999999999999999 9999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||+..+..+|+.|..|+.|+++.|........|.. ...|+|+||++++++.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~------------------~~~G~~aey~~~~~~~~~~~P~~~ 141 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIK------------------GLHGFMREYFVDDPEYLVKVPPSL 141 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcC------------------CCCccceeEEEeccccEEECCCCC
Confidence 99999999888999999999999999986543212211 013699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHH------hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHhC
Q 017052 167 PLEKICLLSCGLSAGLGAAW------NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAF 237 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~------~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~---~~~~~~~l~~~ 237 (378)
+ ++ +.+..++.+++.++. ....+++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++.++++
T Consensus 142 ~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~ 218 (355)
T cd08230 142 A-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL 218 (355)
T ss_pred C-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Confidence 8 43 444445555555432 22336789999999999999999999999999 8999987 68899999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc-----cccccc
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-----YGLFLS 312 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-----~~~~~~ 312 (378)
|++. +++. +.++.+ .+ ..+++|+||||+|++..+..++++++++ |+++.+|....+..+.+. ...+.+
T Consensus 219 Ga~~-v~~~--~~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k 291 (355)
T cd08230 219 GATY-VNSS--KTPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLG 291 (355)
T ss_pred CCEE-ecCC--ccchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhc
Confidence 9987 4554 233333 21 1248999999999877889999999997 999999987653333333 122356
Q ss_pred ccEEEEeeeccCCcCCcHHHHHHHHHcCCC----CCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKEF----MVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 313 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++++.|+.... .++++++++++.++.+ .+.++++++|+++++++|++.++++. .|++|++
T Consensus 292 ~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 292 NKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred CcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 88888875432 3578899999988772 25567889999999999999887554 5999875
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.4e-47 Score=360.42 Aligned_cols=331 Identities=26% Similarity=0.413 Sum_probs=279.0
Q ss_pred EEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC-C---CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-A---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 16 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
++++++++++++++.|.|.++++||+|||.++++|++|++.+.+. . .+|.++|||++|+|+++|+.+..+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567788877999999999999999999999999999999876332 2 458899999999999999999877 99999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC------C
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS------I 165 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~------~ 165 (378)
++.+..+|+.|..|+.|+++.|...... |.. ..|+|+||+.+|.+.++++|+ +
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~~ 139 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMP--GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAAG 139 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCcc--CcC-------------------CCCcccceEEechHHeEECCcccccccC
Confidence 9999999999999999999999775432 211 126999999999999999999 8
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++++.+++++.++|+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus 140 ~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 140 LPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP 217 (349)
T ss_pred CCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999998 46789999999999999999999999999999 79999999999999999999999887
Q ss_pred CCC-CchHHHHHHHHhCC-Ccc----EEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEe
Q 017052 246 NDN-NEPVQQVIKRITDG-GAD----YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 319 (378)
Q Consensus 246 ~~~-~~~~~~~i~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 319 (378)
.+. ..++.+.+++++++ ++| +||||+|+...+..++++++++ |+++.+|.......+++.. .+.++.++.+.
T Consensus 218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~~~g~ 295 (349)
T TIGR03201 218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLSN-LMAFHARALGN 295 (349)
T ss_pred ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccCHHH-HhhcccEEEEE
Confidence 531 13577778888876 776 8999999877888899999997 9999999875433333221 12346777776
Q ss_pred eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 320 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+... ..+++++++++.++++++.++++ .|+|+++++||+.+++++.. |+++++
T Consensus 296 ~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 296 WGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred ecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 5422 35789999999999998877764 79999999999999998876 988863
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3e-47 Score=360.18 Aligned_cols=333 Identities=22% Similarity=0.332 Sum_probs=268.8
Q ss_pred eEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 15 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
+++..+.++++++.+.+.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|+++.+|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 55566665568888999999999999999999999999999988754 458899999999999999999999999999
Q ss_pred Eeeccc-CCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 92 LTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 92 ~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
.+.+.. +|+.|..|++|+++.|........+.. ..| ....|+|+||+.+|++.++++|+++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 154 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSDS 154 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHHH
Confidence 866544 699999999999999997643110000 001 00136999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhCCCcEEeCCCCC
Q 017052 171 ICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~l~~~g~~~vi~~~~~ 248 (378)
++.+++...|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|+++++++.
T Consensus 155 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~-- 231 (375)
T PLN02178 155 GAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTT-- 231 (375)
T ss_pred cchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCc--
Confidence 99999999999998744432 3689999999999999999999999999 7888877654 47888999999998875
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
+. +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|.......+++.. .+.+++++.|+.... .+
T Consensus 232 ~~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~~-~~~~~~~i~g~~~~~---~~ 302 (375)
T PLN02178 232 DS---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKPLDLPIFP-LVLGRKMVGGSQIGG---MK 302 (375)
T ss_pred CH---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCCCccCHHH-HHhCCeEEEEeCccC---HH
Confidence 21 34555443 7999999999876889999999997 9999999764322233222 224688888876543 34
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++.++++++.+|++++. + ++|||+++++||+.+++++.. |++|++
T Consensus 303 ~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 303 ETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 68999999999998765 4 679999999999999998876 999976
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.4e-46 Score=350.48 Aligned_cols=318 Identities=22% Similarity=0.312 Sum_probs=266.1
Q ss_pred eEEeecCCC----CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 15 AAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 15 a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|+.+.++|. +++++++|.|.|+++||+|||+++|+|++|.+.+.|.+ .+|.++|||++|+|+++|+.+.+|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 356666663 38899999999999999999999999999999988864 24689999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|++.+ ..+|..|..|..|+++.|..... .|.. ..|+|+||+.+|++.++++|+++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-------------------~~G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWD-------------------TDGGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 99998765 45799999999999999987643 2221 13699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999998 56889999999999999999999999999999 799999999999999999999998753
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 325 (378)
+ .. .+++|+++++.+.+..+..++++++++ |+++.+|....+. ..+... .+.+++++.++....
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~-- 282 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSNT-- 282 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecCC--
Confidence 1 11 126899998888778899999999997 9999999753321 122222 234577887765422
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
+.++.++++++.++++++ ++++|+|+++++|++.+++++.. |+||
T Consensus 283 -~~~~~~~~~l~~~g~i~~---i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 -RADAREFLELAAQHGVRV---TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred -HHHHHHHHHHHHhCCCee---EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 346788999999999753 57899999999999999998887 9887
No 27
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=7.9e-46 Score=350.48 Aligned_cols=345 Identities=28% Similarity=0.418 Sum_probs=286.6
Q ss_pred eeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCc------
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE------ 84 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~------ 84 (378)
||+++.++++++++++.+.|.|+++||+|||.++++|++|+....|.. .+|.++|||++|+|+++|+++.+
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 799999999779999999999999999999999999999998887753 46779999999999999999986
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC-ceeeCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~iP 163 (378)
|++||+|+..+..+|+.|..|+.+.++.|.+.... |.....+. ....|+|+||+.++++ +++++|
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~~~~~~------------~~~~g~~a~~~~v~~~~~~~~lP 147 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHEASCDD------------PHLSGGYAEHIYLPPGTAIVRVP 147 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--cccccccC------------CCCCcccceEEEecCCCceEECC
Confidence 99999999999999999999999999999876532 22100000 0013699999999986 899999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++.++++.+++++.|||+++.+....++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.++
T Consensus 148 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 148 DNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred CCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 99999999999899999999996666667999999998899999999999999997789999999999999999999988
Q ss_pred CCCCC-CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEee
Q 017052 244 NPNDN-NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 320 (378)
Q Consensus 244 ~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 320 (378)
++++. ..++...+.+++++ ++|++|||+|+...+..++++++++ |+++.+|.........+.+.. +.+++++.++.
T Consensus 228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (361)
T cd08231 228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH 306 (361)
T ss_pred cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcc
Confidence 77531 12234567787776 8999999998867788999999997 999999976533333344322 34588887776
Q ss_pred eccCCcCCcHHHHHHHHHcC--CCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 321 FGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
... .+++.++++++.++ .+.+..+++++|+++++++||+.+++++..|++|++
T Consensus 307 ~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 307 NYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred cCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 432 35788999999988 666777788999999999999999988767999863
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=7.2e-46 Score=349.44 Aligned_cols=331 Identities=31% Similarity=0.495 Sum_probs=282.9
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--------------CCCcccccceeEEEEEe
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--------------IFPRIFGHEASGIVESV 78 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--------------~~p~~~G~e~~G~V~~v 78 (378)
|||+++.++++ +++++.+.|+|+++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998775 9999999999999999999999999999987654321 26889999999999999
Q ss_pred CCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCc
Q 017052 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (378)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 158 (378)
|+++..|++||+|+..+..+|+.|.+|..+..+.|..... .|+. . ..|+|+||+.++.+.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----------------~~g~~a~~~~~~~~~ 139 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLG-G-----------------GGGGFAEYVVVPAYH 139 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccC-C-----------------CCCceeeEEEechHH
Confidence 9999999999999999999999999999999999976542 1211 0 136999999999999
Q ss_pred eeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 159 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
++++|+++++++++.+ ..+.|||+++ ..+++++|++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|
T Consensus 140 ~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g 217 (351)
T cd08233 140 VHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELG 217 (351)
T ss_pred eEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 9999999999998876 5778999998 7889999999999998999999999999999977899999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTL 316 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 316 (378)
++.++++. ..++.+.+++++++ ++|++||++|++..+..++++++++ |+++.+|..... ..+... .+.+++++
T Consensus 218 a~~~i~~~--~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i 292 (351)
T cd08233 218 ATIVLDPT--EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKTL 292 (351)
T ss_pred CCEEECCC--ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcEE
Confidence 99999887 56688888888877 7999999999777889999999997 999999986532 233332 23468888
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccH-HHHHHHhhcCce--eEEEE
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI-NQAFNLMKEGKC--LRSVI 374 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i-~~A~~~l~~~~~--~kvvi 374 (378)
.+..... .++++++++++.++.+++.+.++++|+++++ ++|++.+.+++. .|++|
T Consensus 293 ~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 293 TGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 8876432 3679999999999999877778899999996 799999988875 49887
No 29
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.3e-45 Score=349.15 Aligned_cols=361 Identities=48% Similarity=0.875 Sum_probs=303.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
+||+++.+.++++++++.+.|++++++|+||+.++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDK 80 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence 4789999988889999999999999999999999999999999887754 45679999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|+..+..+|+.|.+|+.+.++.|......+ .|.. .+|+..+...|.+.++..+.|+|++|+.++++.++++|++++++
T Consensus 81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 999988899999999999999997755332 2322 44555555566555555566899999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+++++.+||+++...+.+++|++|||+|+|++|++++++|+.+|+..++++++++++.+.++++|++++++.++.+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 239 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence 99999999999999988888999999999998899999999999999996688888899999999999999988876322
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhc-cCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC-DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
.++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........+....+.++.++.|.++..+...+
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 318 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence 267777888775589999999987678889999999 86 9999998764223344444444456778877665555456
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
.+.++++++.++.+++.+++.++|+++++++|++.+++++..|++++
T Consensus 319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 78899999999998876677899999999999999988877787763
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1e-45 Score=348.58 Aligned_cols=339 Identities=21% Similarity=0.307 Sum_probs=275.3
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
..++|+++++++.++++++++.|+|+++||+|||.++++|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 348899999999999999999999999999999999999999999887754 45889999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+ ..+|+.|..|+.|+++.|....+...+.. ..| ....|+|+||+.+|...++++|+++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~ 153 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG-------------KPTQGGFASAMVVDQKFVVKIPEGM 153 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC-------------ccCCCccccEEEEchHHeEECCCCC
Confidence 99998654 44799999999999999987532110000 001 0113699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+|+.+|+ +++++++++++.+ .++++|++.++++
T Consensus 154 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~ 232 (357)
T PLN02514 154 APEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVS 232 (357)
T ss_pred CHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecC
Confidence 9999999999999999998665566899999999889999999999999999 7888877776664 4467999888766
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
. +. +.+.+.+ +++|++|||+|....+..++++++++ |+++.+|.......+... ..+.+++++.|+....
T Consensus 233 ~--~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 233 S--DA---AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTPLQFVTP-MLMLGRKVITGSFIGS-- 302 (357)
T ss_pred C--Ch---HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCCCcccHH-HHhhCCcEEEEEecCC--
Confidence 4 21 2344443 37999999999767888999999997 999999976532222222 2235688888887543
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
..+++++++++.+++++ +++ ++|+++++.+||+.+++++.. |++|.+++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 24689999999999865 345 689999999999999998886 99998763
No 31
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=7.9e-45 Score=343.77 Aligned_cols=359 Identities=35% Similarity=0.626 Sum_probs=288.5
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
++|||+++.++++++++++.+.|.+.++||+|||.++++|++|++...|.. .+|.++|+|++|+|+++|+++..|++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCC
Confidence 579999999987789999999999999999999999999999999887754 467899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCccccccc-CCcc-cccccccceeeEEEEeCCceeeCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIK-GKPV-YHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~-~~~~-~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
|+|++.+. +|+.|..|+.++.+.|....... .|.. ++|....... +.+. .+....|+|++|+.++.+.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99998764 89999999999999998654211 1111 0000000000 0000 00112479999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++++.+++++.|||.++.....+++|++|||+|+|.+|++++|+|+.+|++.++++++++++.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998888899999999999889999999999999999779999999999999999999999887
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 324 (378)
+ ..++.+.+.++++.++|+++||+|++..+..++++++++ |+++.+|.........+....+ .++.++.++.....
T Consensus 239 ~--~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 K--EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred C--CcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 6 456777788877339999999999767889999999997 9999999764322333443333 46788877654333
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
...+.+.++++++.++.+++...+ ..|+++++++|++.+++++..|++|+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 223457889999999988653344 68999999999999998887799885
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6e-44 Score=336.40 Aligned_cols=339 Identities=25% Similarity=0.337 Sum_probs=280.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++.+.+.|.+.++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+.+.+|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999885 8999999999999999999999999999998876643 4578999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|++.+..+|+.|..|..|+++.|..... +.++. ....|+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~-~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~ 141 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG-GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGLT 141 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC-Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCCC
Confidence 99998888999999999999999986421 00000 0113699999999974 8999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..+.|||+++ +.+.+++|++|||+|+|.+|++++|+|+.+|+..++++++++++.+.++++|++++++++
T Consensus 142 ~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~- 219 (351)
T cd08285 142 DEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK- 219 (351)
T ss_pred HHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC-
Confidence 999999999999999996 778899999999998899999999999999996699999999999999999999999886
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc---ccccEEEEeeecc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFGG 323 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~ 323 (378)
..++.+.+.+++.+ ++|+++|++|++..+..++++++++ |+++.+|.........+....+ ....++.+....
T Consensus 220 -~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 296 (351)
T cd08285 220 -NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP- 296 (351)
T ss_pred -CCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC-
Confidence 45677778877766 8999999999877889999999997 9999998765433333332121 234455443321
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCc-ceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDE-FITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
...+.++++++++.++++++.. .+.+.++++++++|++.+++++. .|++|++
T Consensus 297 -~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 -GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred -CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 1235789999999999988743 34456999999999999998874 4999875
No 33
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=8.9e-44 Score=336.52 Aligned_cols=358 Identities=39% Similarity=0.695 Sum_probs=289.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.+++.++++++++.|.+++++|+||+.++++|+.|...+.|.. .+|.++|+|++|+|+++|+++..|++||+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCE
Confidence 7999999998889999999999999999999999999999998887754 45678999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+..+|++|.+|++++.+.|+....--.|.. .++..++...|...+.....|+|++|+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCCCCCCCChhhcCCCcccCccccccccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 9999999999999999999999986531000000 111111111111222223357999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
++.+++++.+||.++....+++++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++++++.+ ..
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~--~~ 237 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS--ED 237 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC--Cc
Confidence 9999999999999988888999999999997799999999999999995599999999999999999998888876 45
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcCC
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 328 (378)
++...+.+++.+ ++|+++|++++...+...+++++++ |+++.+|.........+....+ ..+..+.++.+......+
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR 316 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence 677778877755 8999999999767889999999997 9999998655322333333332 246666666543323345
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
.++++++++.++.+++.+.+.++|+++++++|++.+++++..|.||
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7889999999999876655678999999999999999887775554
No 34
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.5e-45 Score=342.05 Aligned_cols=318 Identities=17% Similarity=0.187 Sum_probs=246.5
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-------CCCcccccceeEEEEEeCCCCCc
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..++++++++++ +++++.+.|+ +++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|.. .
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 457899998886 9999999995 99999999999999999999998853 35889999999999998864 7
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||++.+..+|+ |+.|. ..+.|...... |.. . .|+|+||+++|+++++++|+
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRFR--SSG-Y------------------DGFMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred cCCCCEEEECCCCCch-hcccc--hhccCCCccee--Eec-C------------------CCceEEEEEEchHHeEECCC
Confidence 9999999998877787 55664 45667654321 111 1 25999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHh--hcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
++++++||.+. +++++|+++.. .+.+++|++|||+|+|++|++++|+|+. +|..+|++++++++|++++++++.+.
T Consensus 134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~ 212 (341)
T cd08237 134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY 212 (341)
T ss_pred CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence 99999887554 88899998743 3457899999999999999999999986 66558999999999999998866543
Q ss_pred EeCCCCCCchHHHHHHHHhCC-CccEEEeccCC---hHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEE
Q 017052 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTL 316 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 316 (378)
.++ ++ ..+ ++|+|||++|+ +..+..++++++++ |+++.+|..... ..+... .+.+++++
T Consensus 213 ~~~------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i 276 (341)
T cd08237 213 LID------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLTL 276 (341)
T ss_pred ehh------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceEE
Confidence 221 11 122 79999999994 45788999999997 999999975432 233322 23568888
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcC---CCCCCcceeeeeccccH---HHHHHHhhcCceeEEEEeCC
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKK---EFMVDEFITHNLLFEDI---NQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~l~~i---~~A~~~l~~~~~~kvvi~~~ 377 (378)
.|+.... .++++++++++.++ ..+++++++++|+++++ .+||+...++...|+||+++
T Consensus 277 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 277 VGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 8875432 34689999999998 33577788999998655 44554444443349999875
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.7e-43 Score=329.47 Aligned_cols=332 Identities=22% Similarity=0.374 Sum_probs=273.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++++.+.|+|+++|++||+.++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 78999998884 9999999999999999999999999999998887754 3588999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+..+..+|+.|..|..+.++.|..... .++. ..|+|+||+.++.+.++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~~~~~~~~~ip~~~~~~ 138 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV--LGVH-------------------RDGGFSEYAVVPAKNAHRIPDAIADQ 138 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce--EEEc-------------------cCCcceeeEEechHHeEECcCCCCHH
Confidence 99999999999999999999999975432 1111 12599999999999999999999998
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++ +...+.++|+ +.+..++++|++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++++++++
T Consensus 139 ~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~-- 214 (339)
T PRK10083 139 YAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA-- 214 (339)
T ss_pred HHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--
Confidence 876 4567788886 4578899999999999999999999999996 6996788899999999999999999999876
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+.++.+.+.. .+ ++|++||++|++..+..++++++++ |+++.+|.......+... ....+++++.+... ..
T Consensus 215 ~~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~----~~ 286 (339)
T PRK10083 215 QEPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPSEIVQQ-GITGKELSIFSSRL----NA 286 (339)
T ss_pred cccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCceecHH-HHhhcceEEEEEec----Ch
Confidence 4455555543 23 5689999999777889999999997 999999876432222111 11134666665543 13
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCc-e-eEEEEeCCC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-C-LRSVIHMPK 378 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~-~-~kvvi~~~~ 378 (378)
+.+.++++++.++.+++..++.+.|+++++++|++.+++++ . .|+++.+++
T Consensus 287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 57889999999999887655779999999999999998653 3 499998875
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.4e-43 Score=338.23 Aligned_cols=328 Identities=18% Similarity=0.225 Sum_probs=260.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccccc-ccCC---------CCCcccccceeEEEEEeCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA---------IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~---------~~p~~~G~e~~G~V~~vG~ 80 (378)
|.|||+++++++. +++++.|.|+++++||+|||.++|||++|++.+ .|.. .+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999999885 999999999999999999999999999999875 3431 2578999999999999999
Q ss_pred CCC-cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--
Q 017052 81 GVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-- 157 (378)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 157 (378)
++. .|++||||++.+...|+.|..|. + .|.. . .|+|+||+++|.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~-~------------------~G~~aey~~v~~~~~ 127 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYT-Y------------------PGGLATYHIIPNEVM 127 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------cccc-C------------------CCcceEEEEecHHhc
Confidence 998 59999999998888888887772 1 1111 1 2599999999987
Q ss_pred --ceeeCCCCCChhhhhhh-chhh-hhhHHHH--------HhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcC--CCeEE
Q 017052 158 --CAVKVSSIAPLEKICLL-SCGL-SAGLGAA--------WNVADISKGSTVVIFGL-GTVGLSVAQGAKARG--ASRII 222 (378)
Q Consensus 158 --~~~~iP~~l~~~~aa~~-~~~~-~ta~~al--------~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g--~~~vi 222 (378)
.++++|+++++++++.+ +.+. .+++.++ .+++++++|++|+|+|+ |++|++++|+|+.+| +.+|+
T Consensus 128 ~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred cCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 68999999999998865 2111 1233332 24678899999999985 999999999999975 45799
Q ss_pred EEcCChhhHHHHHhC--------CCc-EEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEE
Q 017052 223 GVDTNPEKCEKAKAF--------GVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAV 292 (378)
Q Consensus 223 ~v~~~~~~~~~l~~~--------g~~-~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v 292 (378)
+++++++|++.++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |+++
T Consensus 208 ~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v 285 (410)
T cd08238 208 VTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLN 285 (410)
T ss_pred EEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEE
Confidence 999999999999997 666 4666542 24677788888887 8999999999878899999999987 8877
Q ss_pred EeccCC-CCCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee
Q 017052 293 TLGVPK-LKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL 370 (378)
Q Consensus 293 ~~g~~~-~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~ 370 (378)
.++... .....+++... +.+++++.|+.... ..+++++++++.++++++..+++++|+|+++++|++.+. ++..
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~ 361 (410)
T cd08238 286 FFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPG 361 (410)
T ss_pred EEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCC
Confidence 664322 21122333322 24688888876432 357899999999999999888999999999999999999 5554
Q ss_pred -EEEEeCC
Q 017052 371 -RSVIHMP 377 (378)
Q Consensus 371 -kvvi~~~ 377 (378)
|++|.++
T Consensus 362 gKvvl~~~ 369 (410)
T cd08238 362 GKKLIYTQ 369 (410)
T ss_pred ceEEEECC
Confidence 9999864
No 37
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=5.8e-43 Score=329.56 Aligned_cols=333 Identities=27% Similarity=0.379 Sum_probs=278.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------------CCCcccccceeEEEEEeCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------------~~p~~~G~e~~G~V~~vG~ 80 (378)
|||+++++++. +++++.+.|++++++|+||+.++++|+.|+..+.|.. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999998875 9999999999999999999999999999998877642 2467899999999999999
Q ss_pred CCC--cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC-
Q 017052 81 GVT--EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (378)
Q Consensus 81 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 157 (378)
.+. .|++||+|+..+..+|+.|..|+.+..+.|.... ..|+. . ...|+|+||+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~-~----------------~~~g~~~~~~~~~~~~ 140 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD--LYGFQ-N----------------NVNGGMAEYMRFPKEA 140 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc--ceeec-c----------------CCCCcceeeEEccccc
Confidence 998 8999999999999999999999999999997542 23331 0 013699999999988
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
.++++|+++++++++.+ .+++++|+++ +.+++++|++|||.|+|.+|++++++|+.+|+..++++++++++.++++++
T Consensus 141 ~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 218 (350)
T cd08256 141 IVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF 218 (350)
T ss_pred ceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHc
Confidence 67899999999999988 7889999997 788999999999977799999999999999986788999999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
|++.+++.+ ..++.+.+.+++++ ++|++||++|++..+..++++++++ |+++.+|.......+++......+++++
T Consensus 219 g~~~v~~~~--~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i 295 (350)
T cd08256 219 GADVVLNPP--EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDV 295 (350)
T ss_pred CCcEEecCC--CcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEE
Confidence 998888875 45677788888777 8999999999766788899999997 9999998654332222222212346677
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.++.... ..+.++++++.++.+++.+++.+.|+++++++|++.+++++.. |+++
T Consensus 296 ~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 296 LGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 6665432 3588899999999988755567899999999999999988765 8774
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6.5e-43 Score=326.94 Aligned_cols=327 Identities=24% Similarity=0.393 Sum_probs=276.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||++++++++++++++.+.|.++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.+|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 7999999997679999999999999999999999999999998887743 4577899999999999999999999999
Q ss_pred EEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
+|++.+ ...|+.|.+|..|.++.|..... .|+. . .|+|+||+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~-~------------------~g~~a~~~~v~~~~~~~lp~~~~~ 139 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVT-R------------------DGGYAEYMLAPAEALARIPDDLDA 139 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc--cCcc-c------------------CCcceeEEEEchhheEeCCCCCCH
Confidence 998754 56799999999999999987653 2221 1 259999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++++.+++.+.+||+++. ...++++++|||+|+|.+|++++++|+.+|+ +++++++++++.+.++++|+++++++.
T Consensus 140 ~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~-- 215 (333)
T cd08296 140 AEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTS-- 215 (333)
T ss_pred HHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCC--
Confidence 999999999999999984 4589999999999999999999999999999 899999999999999999999998876
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 327 (378)
..++.+.++++ +++|+++|++|.+..+...+++++++ |+++.+|.... .++++.. .+.+++++.++.... .
T Consensus 216 ~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~ 287 (333)
T cd08296 216 KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---A 287 (333)
T ss_pred CccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---H
Confidence 44566666665 37999999997667889999999997 99999987653 2333332 225688888876432 2
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.++..+++++.++.++. .+ +.|+++++.+|++.+++++.. |+||+
T Consensus 288 ~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 288 LDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 46788888888887654 34 689999999999999998886 99874
No 39
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=7.1e-43 Score=327.69 Aligned_cols=330 Identities=28% Similarity=0.427 Sum_probs=281.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.++++++++.+.+.|.+++++|+||+.++++|++|+....|.+ .+|.++|+|++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 7999999987789999999999999999999999999999998876643 3468899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+..+|+.|..|..|..+.|......+.+ ..|+|++|+.++.++++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~g~~~~~~~v~~~~~~~~P~~l 139 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIG---------------------TDGGFAEYLLVPSRRLVKLPRGL 139 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCcc---------------------CCCcceeeEEecHHHeEECCCCC
Confidence 999999999899999999999999999988763221 13599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++|+|+.+| . +|+++++++++.+.++++|++++++
T Consensus 140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 9999999999999999998665 46889999999999779999999999999 6 8899999999999999999999988
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeecc
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
++ .. +.+.+++++.+ ++|+++|++|+......++++++++ |+++.+|.... ..++... .+.+++++.+.....
T Consensus 219 ~~--~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 292 (340)
T cd05284 219 AS--DD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH-GRLPTSD-LVPTEISVIGSLWGT 292 (340)
T ss_pred CC--cc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-CccCHHH-hhhcceEEEEEeccc
Confidence 86 34 77788888776 8999999999767889999999997 99999987643 2222111 134677777665322
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+.++++++.++.+++ ..+.|+++++++|++.+++++.. |+++.+
T Consensus 293 ---~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 293 ---RAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ---HHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 356888999999998765 24679999999999999988876 888753
No 40
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.9e-43 Score=326.44 Aligned_cols=300 Identities=21% Similarity=0.280 Sum_probs=237.8
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecC-cccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLC-RSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+|||+++.+++. +++++.+.|+|+++||+|||+++||| ++|++.+.|.+ .+|.++|||++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998775 99999999999999999999999996 79998887754 358899999999999999998 6
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||+.. |..|..|..+ . .|+|+||+++|++.++++|+
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~~-----------------~------------------~G~~aey~~v~~~~~~~ip~ 119 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVRG-----------------L------------------FGGASKRLVTPASRVCRLDP 119 (308)
T ss_pred CCCCCEEEEe----Cccccccccc-----------------c------------------CCcccceEEcCHHHceeCCC
Confidence 9999999873 2233332211 1 25999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+++++. +.++ ...|||+++.+ . ..++++|||+|+|++|++++|+|+.+|++.|++++.++++++.++++ .+++
T Consensus 120 ~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~ 192 (308)
T TIGR01202 120 ALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLD 192 (308)
T ss_pred CCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccC
Confidence 999864 5454 57899999844 3 34688999999999999999999999996677788888777766553 3444
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
++ + . ...++|+||||+|++..+..++++++++ |+++.+|.......+++... +.+++++.++....
T Consensus 193 ~~--~-~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~i~~~~~~~- 258 (308)
T TIGR01202 193 PE--K-D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVPA-FMKEARLRIAAEWQ- 258 (308)
T ss_pred hh--h-c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccchh-hhcceEEEEecccc-
Confidence 42 1 1 1238999999999977889999999997 99999998654323333222 24577887665322
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce-eEEEEe
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC-LRSVIH 375 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~-~kvvi~ 375 (378)
.++++++++++.++++++.++++++|+|+++++|++.+.++.. .|++|+
T Consensus 259 --~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 259 --PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred --hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 3579999999999999988889999999999999998776554 499874
No 41
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.9e-42 Score=325.70 Aligned_cols=338 Identities=30% Similarity=0.417 Sum_probs=280.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++. +.+.+.+.|.| .+++|+|||.++++|++|++.+.|.. .+|.++|+|++|+|+++|++++++++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998876 89999999999 99999999999999999998887754 457899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l 166 (378)
|+|+..+..+|+.|.+|++|+...|+......++- ....|+|++|+.++.+ +++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~v~~~~~~~~~lP~~~ 141 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG------------------NRIDGGQAEYVRVPYADMNLAKIPDGL 141 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc------------------cCCCCeeeEEEEecchhCeEEECCCCC
Confidence 99999999999999999999999998754321100 0123699999999987 999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++.+.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|...++++++++++.+.++++|++.+++++
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~ 220 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 9999999999999999998 778899999999987799999999999999965788888889999999999999998886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
..++.+.+++++++ ++|++||++|+...+..++++++++ |+++.+|..............+.+++++.+.....
T Consensus 221 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (347)
T cd05278 221 --NGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-- 295 (347)
T ss_pred --cchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc--
Confidence 45677888887776 8999999999766888999999997 99999986543221112222234566666543221
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce-e-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC-L-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~-~-kvvi~~ 376 (378)
.+.+.++++++.++.+.+...+...++++++++|++.+..++. . |++++.
T Consensus 296 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 296 -RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 3568889999999998765545688999999999999988776 4 888763
No 42
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.7e-42 Score=328.68 Aligned_cols=351 Identities=28% Similarity=0.384 Sum_probs=281.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.++++ +++.+.+.|.| ++++|+||+.++++|++|+..+.|.. ++|.++|||++|+|+++|+++.++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999998764 99999999988 49999999999999999999988865 357899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccc--cccccCCCcccccccCCc-ccccccccceeeEEEEeCC--ceeeCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKP-VYHYCAVSSFSEYTVVHSG--CAVKVS 163 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~-~~~~~~~g~~a~~~~v~~~--~~~~iP 163 (378)
|+|+..+..+|+.|.+|..+.++.|....... .++ .|....+..|-. .. ....|+|+||++++.+ .++++|
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKL---YGHAGAGIFGYSHLT-GGYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccc---ccccccccccccccc-CCCCCeeEEEEEcccccCeEEECC
Confidence 99999988899999999999999998765421 000 000000000000 00 0013699999999988 899999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++++++.++..++|||+++ +..++++|++|||+|+|.+|++++++|+..|+.+++++++++++.+.+++++...++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 9999999999999999999998 888999999999998899999999999999985699999999999999998544677
Q ss_pred CCCCCCc-hHHHHHHHHhCC-CccEEEeccCC---------------------hHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 244 NPNDNNE-PVQQVIKRITDG-GADYSFECIGD---------------------TGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 244 ~~~~~~~-~~~~~i~~~~~~-~~d~vid~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
++. .. ++.+.+.+++.+ ++|++||++|+ ...+..++++++++ |+++.+|.....
T Consensus 235 ~~~--~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~ 311 (386)
T cd08283 235 NFE--EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT 311 (386)
T ss_pred cCC--cchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC
Confidence 765 33 477888888877 89999999975 24678899999997 999999876542
Q ss_pred Ceeeccc-cccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 301 PEVAAHY-GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 301 ~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
...+.. ..+.+++++.+.... ..+.+.++++++.++++....++.+.|+++++.+|++.+.+++. .|++|+.
T Consensus 312 -~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 312 -VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred -cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 222332 233457777765422 23568889999999998876667789999999999999988763 4999863
No 43
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5.8e-42 Score=322.13 Aligned_cols=334 Identities=27% Similarity=0.419 Sum_probs=281.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++. +++.+.+.|+| .++||+|||+++++|++|+..+.|.+ .+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 78999999886 99999999986 89999999999999999999887754 347889999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l 166 (378)
|+|++.+..+|+.|.+|..++++.|....+. .|.. ..|+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------~~g~~~~~~~v~~~~~~~~~lp~~~ 139 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNL-------------------IDGTQAEYVRIPHADNSLYKLPEGV 139 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccc-------------------cCCeeeeEEEcccccCceEECCCCC
Confidence 9999998889999999999999888876431 1111 12699999999987 899999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+.++++.+++.+++||.++....++++|++|||.|+|.+|++++|+|+.+|..+++++++++++.+.++++|++.+++++
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (345)
T cd08286 140 DEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA 219 (345)
T ss_pred CHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccc
Confidence 99999999999999999877788899999999998899999999999999943889999999999999999999999886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW 324 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 324 (378)
..++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|..... ..+.... +.+++++.+....
T Consensus 220 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-- 292 (345)
T cd08286 220 --KGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD-- 292 (345)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc--
Confidence 45677778877776 8999999999777888899999997 999999865432 3333333 4467777664322
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcC---ceeEEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG---KCLRSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~---~~~kvvi~~ 376 (378)
.+.+.++++++.++.+++.+++.++|+++++++|++.+.+. ...|++|++
T Consensus 293 --~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 --TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred --hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 14578899999999988766677999999999999999876 345999974
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=7.3e-42 Score=321.48 Aligned_cols=335 Identities=27% Similarity=0.420 Sum_probs=284.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++.++++++.+.|.+.+++|+||+.++++|++|+..+.|.. .+|.++|+|++|+|+++|+.+..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 7999999998889999999999999999999999999999998887754 3377899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|+..+..+|+.|.+|..|..+.|..... .|+. ..|+|++|+.++.. +++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~~ 139 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFT-------------------HPGSFAEYVAVPRADVNLVRLPDDVD 139 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc--cccC-------------------CCCcceeEEEcccccCceEECCCCCC
Confidence 99987788999999999999999998643 2221 12599999999975 9999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..+.|||+++.+.+++.++++|+|+|+|.+|++++|+|+..|+ .++++++++++.+.++++|++.+++++
T Consensus 140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~- 217 (345)
T cd08260 140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS- 217 (345)
T ss_pred HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc-
Confidence 999999999999999998778889999999999999999999999999999 899999999999999999999999886
Q ss_pred CC-chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe-eecccccc-ccccEEEEeeeccC
Q 017052 248 NN-EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLF-LSGRTLKGSLFGGW 324 (378)
Q Consensus 248 ~~-~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~ 324 (378)
. .++.+.+.++..+++|++|||+|+...+...+++++++ |+++.+|....... ..+....+ .+++++.+....
T Consensus 218 -~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 -EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred -cchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 56777777776668999999999767788999999997 99999987654322 23332222 456777665432
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..+.++++++++.++.+.+...+.+.++++++++|++.+++++.. |+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 235688899999999987655567899999999999999988776 88764
No 45
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1e-41 Score=321.11 Aligned_cols=334 Identities=25% Similarity=0.373 Sum_probs=281.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---------------CCCcccccceeEEEEE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---------------IFPRIFGHEASGIVES 77 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---------------~~p~~~G~e~~G~V~~ 77 (378)
|||+++..++.++++.+.+.|+++++||+||+.++++|++|+..+.|.+ .+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 7999999999889999999999999999999999999999998876632 2357899999999999
Q ss_pred eCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
+|+++.++++||+|++.+...|+.|..|.++..+.|...... |.. ..|+|++|+.++.+
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~ 139 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIF-------------------QDGGYAEYVIVPHS 139 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eee-------------------ccCcceeeEEecHH
Confidence 999999999999999999999999999999999999775321 111 13699999999999
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
.++++|+++++++++.+.+.+.|||+++.+...++++++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++
T Consensus 140 ~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 219 (350)
T cd08240 140 RYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219 (350)
T ss_pred HeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999987666667899999998899999999999999997788998999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 317 (378)
|++.+++.+ +..+.+.+.++..+++|++||++|....+..++++++++ |+++.+|........+..... +++.++.
T Consensus 220 g~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~i~ 295 (350)
T cd08240 220 GADVVVNGS--DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLLP-LRALTIQ 295 (350)
T ss_pred CCcEEecCC--CccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHHh-hcCcEEE
Confidence 998888775 445666677766558999999999767889999999997 999999876543333333333 3677777
Q ss_pred EeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+..... .+++.++++++.++.++.. +...|+++++++|++.+.+++.. |+++++
T Consensus 296 ~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 296 GSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred EcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 665433 2568889999999987654 45789999999999999888776 988753
No 46
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.4e-41 Score=320.08 Aligned_cols=336 Identities=26% Similarity=0.391 Sum_probs=268.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..|+++++..+. .+++++.+.|.+.++||+|||+++++|++|++.+.+.. .+|.++|||++|+|+++|+++..
T Consensus 16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 345556666655 49999999998999999999999999999998876521 35778999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||+|++.+..+|+.|..|+.|.++.|..... .+.. +..|+|+||+.++.+.++++|+
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~--~~~~------------------~~~g~~~~y~~v~~~~~~~~P~ 154 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF--FATP------------------PVHGSLANQVVHPADLCFKLPE 154 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc--cCCC------------------CCCCcccceEEcchHHeEECCC
Confidence 9999999999999999999999999999986421 1100 0136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++.. ..+.++|+++ +..++.+|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++
T Consensus 155 ~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~ 232 (364)
T PLN02702 155 NVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL 232 (364)
T ss_pred CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence 9999998763 2455688877 7888999999999988999999999999999966888989999999999999999877
Q ss_pred CCCCCchHHHHHHHH---hCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee
Q 017052 245 PNDNNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
++....++.+.+.++ ..+++|++||++|++..+..++++++++ |+++.+|.......+... ....+++++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~ 310 (364)
T PLN02702 233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPLT-PAAAREVDVVGVFR 310 (364)
T ss_pred cCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcccHH-HHHhCccEEEEecc
Confidence 642234566666554 2338999999999767889999999997 999999875432111111 22345778877653
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeecc--ccHHHHHHHhhcCcee-EEEEe
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLF--EDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
. ...+..+++++.++.+.+.+.+.++|++ +++++|++.+++++.. |++|.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2467889999999998765567788665 7999999999888765 99985
No 47
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.8e-41 Score=324.20 Aligned_cols=338 Identities=20% Similarity=0.251 Sum_probs=275.5
Q ss_pred cccceeeEEeec--CCC---CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------------CCC-cccccc
Q 017052 9 QVITCKAAVAWG--AGQ---PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFP-RIFGHE 70 (378)
Q Consensus 9 ~~~~~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------------~~p-~~~G~e 70 (378)
.|.+|||+++.. .+. .+++++.+.|.++++||+|||.++++|++|++.+.|.. ..| .++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 678899999863 332 27888999999999999999999999999988776531 113 478999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceee
Q 017052 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (378)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (378)
++|+|+++|++++.|++||+|++.+...|+.|..|..+..+.|..... .|.. ...|+|++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~------------------~~~g~~a~ 148 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYE------------------TNYGSFAQ 148 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--cccc------------------CCCCccee
Confidence 999999999999999999999999999999999999999999976543 2221 01369999
Q ss_pred EEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhh--cCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 151 ~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
|+.++...++++|+++++++++.+++.+.|||+++... +++++|++|||+|+ |.+|++++++|+.+|+ ++++++++
T Consensus 149 y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s 227 (393)
T cd08246 149 FALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSS 227 (393)
T ss_pred EEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCC
Confidence 99999999999999999999999999999999998654 68899999999997 9999999999999999 77888899
Q ss_pred hhhHHHHHhCCCcEEeCCCCC--------------------CchHHHHHHHHhCC--CccEEEeccCChHHHHHHHHHhc
Q 017052 228 PEKCEKAKAFGVTEFLNPNDN--------------------NEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCC 285 (378)
Q Consensus 228 ~~~~~~l~~~g~~~vi~~~~~--------------------~~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~~l~ 285 (378)
+++.+.++++|+++++++++. ...+.+.+.+++++ ++|++||++|+ ..+..++++++
T Consensus 228 ~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~ 306 (393)
T cd08246 228 EEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCD 306 (393)
T ss_pred HHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhc
Confidence 999999999999998886421 11356677888776 69999999997 67888999999
Q ss_pred cCCccEEEeccCCCC-CeeeccccccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHh
Q 017052 286 DGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364 (378)
Q Consensus 286 ~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l 364 (378)
++ |+++.+|..... ..+++.. .+.++.++.+.+... .+.+.++++++.++.+.+ .+.++|+++++++|++.+
T Consensus 307 ~~-G~~v~~g~~~~~~~~~~~~~-l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~ 379 (393)
T cd08246 307 RG-GMVVICAGTTGYNHTYDNRY-LWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLM 379 (393)
T ss_pred cC-CEEEEEcccCCCCCCCcHHH-HhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHH
Confidence 97 999999865432 1222222 224466776665433 246888999999998764 367899999999999999
Q ss_pred hcC-cee-EEEEe
Q 017052 365 KEG-KCL-RSVIH 375 (378)
Q Consensus 365 ~~~-~~~-kvvi~ 375 (378)
.++ +.. |+++-
T Consensus 380 ~~~~~~~gkvvv~ 392 (393)
T cd08246 380 HRNQHHVGNMAVL 392 (393)
T ss_pred HhCccccceEEEe
Confidence 988 565 88764
No 48
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.9e-41 Score=319.90 Aligned_cols=356 Identities=33% Similarity=0.520 Sum_probs=285.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCc---CCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE---FNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~---~~~ 87 (378)
|||+++.+++.++++.+.++|.++++||+||+.++++|++|+....+.. .+|.++|||++|+|+.+|+.+.. |++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~ 80 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCC
Confidence 7899999998779999999999999999999999999999999887754 45778999999999999999888 999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCccccccccc-c-cccCCC-cccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR-G-VMHSDQ-QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~-g-~~~~~g-~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
||+|++.+..+|+.|.+|..+..+.|.......+ + .. ..| +..+...+.+.+. ...|+|++|+.++.+.++++|+
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 81 GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL-YDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc-cCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCC
Confidence 9999998888999999999999999997641100 0 00 000 0000000000000 1236999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++.++..+.|||+++.+...++++++|||+|+|.+|++++++|+.+|+..++++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999877788899999999988999999999999999944999989999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 322 (378)
.+ ..++.+.+++...+ ++|++||++++.+....++++++++ |+++.+|.........+....+ .++.++.++...
T Consensus 239 ~~--~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AA--KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CC--cccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 76 45677778877766 8999999999854788999999997 9999998664322223333333 457777664321
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
...+.+.++++++.++.+.+...+.+.++++++.+|++.+++++.. |+||+
T Consensus 316 --~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 --RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred --CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1234688899999999987765567889999999999999988876 88874
No 49
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=8.9e-42 Score=318.09 Aligned_cols=306 Identities=20% Similarity=0.250 Sum_probs=251.1
Q ss_pred eeeEEeecCCCC-----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 13 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
|||+++.++++| +++.+.+.|.|+++||+||+.++++|++|+..+.|.+ .+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 789999998854 7888899999999999999999999999999887754 3578999999999999999998
Q ss_pred c-CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 84 E-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
+ |++||+|++... . .|+|+||+.+|++.++++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~------------------~g~~a~~~~v~~~~~~~i 113 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------S------------------YGTYAEYAVADAQQCLPL 113 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------C------------------CCcchheeeecHHHeEEC
Confidence 6 999999987520 0 158999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE-cc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~-Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~ 240 (378)
|+++++++++++++...|||.++ +.... ++++++|+ |+ |++|++++|+|+.+|+ +++++++++++.+.++++|++
T Consensus 114 P~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~ 190 (324)
T cd08291 114 PDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAE 190 (324)
T ss_pred CCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 99999999998888899998544 55555 56666665 55 9999999999999999 899999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEE
Q 017052 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKG 318 (378)
Q Consensus 241 ~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g 318 (378)
++++++ ..++.+.+++++.+ ++|++||++|+. .....+.+++++ |+++.+|.........++. ..+.+++++.+
T Consensus 191 ~~i~~~--~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08291 191 YVLNSS--DPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266 (324)
T ss_pred EEEECC--CccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence 999886 56788888888877 899999999984 567789999997 9999998764432211222 22356888888
Q ss_pred eeeccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 319 SLFGGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
+....+.. .+.++++++++. +.+ ++.++++|+++|+++|++.+++++.. |++|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 267 FWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 87654321 235677888887 654 45588999999999999999998775 99874
No 50
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=6.2e-41 Score=314.65 Aligned_cols=334 Identities=25% Similarity=0.358 Sum_probs=272.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
||++++.+++..+++.+.+.|.|+++||+||++++++|++|+.++.+.. .+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 7899999988789999999999999999999999999999998654421 3577899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+..+|..|..|+.+++++|+.... .+.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~iP~~l 139 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVN-------------------RPGAFAEYLVIPAFNVWKIPDDI 139 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeec-------------------CCCcceeeEEechHHeEECcCCC
Confidence 99999999999999999999999999987532 1111 23699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+ ..+.++++++.. ...+|++|+|.|+|.+|++++|+|+.+|+++++++++++++.+.++++|++++++++
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 140 PDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred CHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 99988754 466667666532 346899999988899999999999999986688888899999999999999999886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
..++.+.+++++.+ ++|++|||+|+...+..++++++++ |+++.+|.......+.+ ...+++++++.++....
T Consensus 217 --~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~-- 290 (341)
T PRK05396 217 --KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE-- 290 (341)
T ss_pred --cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC--
Confidence 45677788887766 8999999999877889999999997 99999987654333332 22234566776654221
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
..+.+..+++++.++ +.+.+.+.+.++++++++|++.+.+++..|++++++
T Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 123466788888888 545455778999999999999998877449999875
No 51
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.5e-40 Score=311.59 Aligned_cols=330 Identities=32% Similarity=0.507 Sum_probs=275.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++.+.+.|.++++|++|||.++++|+.|+....+.. .+|.++|+|++|+|+++|+++..|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 78999998875 9999999999999999999999999999998877654 3477899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+..+..+|+.|..|..++.+.|.+... .++. ..|+|++|+.++++ ++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~~ 137 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV--LGVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSLD 137 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe--eeec-------------------CCCcceeEEEechh-eEECCCCCCHH
Confidence 99998888999999999999999964432 1111 13599999999999 99999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+ ..+.++++++ ....+++|++|||+|+|.+|++++|+|+.+|+ +++++.+++++.+.++++|+++++++. .
T Consensus 138 ~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~--~ 212 (337)
T cd08261 138 QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG--D 212 (337)
T ss_pred Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc--c
Confidence 99877 4678888887 78899999999999889999999999999999 899998999999999999999999887 4
Q ss_pred chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcC
Q 017052 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (378)
.++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|...... .+....+ ..++++.+... ...
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 286 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPV--TFPDPEFHKKELTILGSRN---ATR 286 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCCC--ccCHHHHHhCCCEEEEecc---CCh
Confidence 5677888888776 8999999998877889999999997 9999998664322 2222222 24666665431 223
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCc-ee-EEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-CL-RSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~-~~-kvvi~~ 376 (378)
+.+.++++++.++.+++.+.+...++++++.+|++.+++++ .. |+|+++
T Consensus 287 ~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 287 EDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 46888999999999876333678999999999999999874 54 999874
No 52
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.5e-40 Score=312.28 Aligned_cols=332 Identities=30% Similarity=0.433 Sum_probs=277.1
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +.+++.+.|++.+++|+|||+++++|+.|+..+.|.. ..|.++|+|++|+|+++|+.+..|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998874 9999999999999999999999999999999887754 4577899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCc-----eeeCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-----AVKVSS 164 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~iP~ 164 (378)
+|+..+..+|++|.+|..++.+.|....... .. ..|+|++|+.++.+. ++++|+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------------~~g~~~~~v~v~~~~~~~~~~~~lP~ 138 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKFG--NL-------------------YDGGFAEYVRVPAWAVKRGGVLKLPD 138 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcceec--cC-------------------CCCcceeeEEecccccccccEEECCC
Confidence 9999999999999999999999998765421 11 135999999999998 999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++.+ ..+.+||+++. ..++++|++|||+|+|.+|++++|+|+..|++.++++++++++.+.++++|.+++++
T Consensus 139 ~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~ 216 (343)
T cd08235 139 NVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTID 216 (343)
T ss_pred CCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEec
Confidence 9999999876 68899999984 558999999999988999999999999999933899999999999999999999888
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 322 (378)
++ +.++.+.++++..+ ++|+++||+++...+...+++++++ |+++.+|.........+.... ..++.++.+....
T Consensus 217 ~~--~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 293 (343)
T cd08235 217 AA--EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA 293 (343)
T ss_pred CC--ccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence 76 56777888887777 8999999999766888999999997 999999865443222222221 1345566554432
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
. .+.++++++++.++.+.+.+.+..+|+++++.+|++.+.+++ . |+|++
T Consensus 294 ~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 294 S---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 356888999999998875444678899999999999999888 6 98874
No 53
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.1e-40 Score=310.21 Aligned_cols=318 Identities=25% Similarity=0.327 Sum_probs=263.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCEEE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVL 92 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (378)
|||+++.+++ ++++++.+.|+++++||+||++++++|++|.....|....|.++|||++|+|+++|++ +++||+|.
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~ 76 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEA---ELVGKRVV 76 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCC---CCCCCeEE
Confidence 7899999876 5999999999999999999999999999999988886667889999999999999987 68999999
Q ss_pred eecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhh
Q 017052 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (378)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa 172 (378)
..+..+|+.|.+|..+.++.|...... ++. ...|+|++|+.++.+.++++|++++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa 136 (319)
T cd08242 77 GEINIACGRCEYCRRGLYTHCPNRTVL--GIV------------------DRDGAFAEYLTLPLENLHVVPDLVPDEQAV 136 (319)
T ss_pred ECCCcCCCCChhhhCcCcccCCCCccc--Ccc------------------CCCCceEEEEEechHHeEECcCCCCHHHhh
Confidence 999999999999999999888876532 111 012599999999999999999999999888
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchH
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~ 252 (378)
.+ ....++|.++ +..++++|++|||+|+|.+|++++|+|+.+|+ +++++++++++.+.++++|++.+++++ ..
T Consensus 137 ~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~--~~-- 209 (319)
T cd08242 137 FA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDE--AE-- 209 (319)
T ss_pred hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcc--cc--
Confidence 64 3455666644 78889999999999889999999999999999 799999999999999999998887764 11
Q ss_pred HHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHH
Q 017052 253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP 331 (378)
Q Consensus 253 ~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 331 (378)
+.+ ++|+++||+|+...+..++++++++ |+++..+.......+++.. .+.++.++.+.... .++
T Consensus 210 -------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~------~~~ 274 (319)
T cd08242 210 -------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLTK-AVVNEITLVGSRCG------PFA 274 (319)
T ss_pred -------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCccCHHH-heecceEEEEEecc------cHH
Confidence 233 8999999998867788999999997 9999877654333333222 22456677665432 378
Q ss_pred HHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 332 SLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 332 ~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++++++.++++++.+.+.+.|+++++++||+.+.++...|++|+.
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 899999999987666678999999999999999977756999863
No 54
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.4e-40 Score=312.59 Aligned_cols=337 Identities=27% Similarity=0.402 Sum_probs=275.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCC-CCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++ .+++++.++|.|. ++||+||+.++++|+.|+....|.. .+|.++|+|++|+|+++|+++.++++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCC
Confidence 7899998775 5999999999985 9999999999999999998887753 3478899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|++.+..+|++|.+|.+++.+.|.....- |. ++ .....|+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 80 RVVSPFTIACGECFYCRRGQSGRCAKGGLF--GY---AG------------SPNLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred EEEEcccCCCCCChHHhCcCcccCCCCccc--cc---cc------------cCCCCCceeEEEEcccccCceEECCCCCC
Confidence 999999899999999999999999765321 10 00 00013699999999864 9999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..++|||+++. ...+++|++|||+|+|.+|++++|+|+.+|+.+++++++++++.+.++++|+. .++.+
T Consensus 143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~- 219 (344)
T cd08284 143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE- 219 (344)
T ss_pred HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC-
Confidence 9999999999999999984 57899999999998899999999999999975788888899999999999975 34554
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
..++...+.+++++ ++|++||++|+...+...+++++++ |+++.+|..............+.+++++.+.. ...
T Consensus 220 -~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 294 (344)
T cd08284 220 -DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPV 294 (344)
T ss_pred -CcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCc
Confidence 45677788888776 8999999999877889999999997 99999997653221111222234566665432 112
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
.+.+.++++++.++.+++...+.+.++++++++|++.+++++..|+|++
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred chhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 4578899999999998765556788999999999998887655788874
No 55
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-40 Score=311.89 Aligned_cols=333 Identities=29% Similarity=0.442 Sum_probs=274.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++++.+.|.| +++||+||+.++++|++|+..+.|.. ..|.++|||++|+|+++|+++..+++||
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGD 79 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCC
Confidence 78999998775 99999999986 89999999999999999988887754 3478999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|+.....+|+.|..|..++.+.|..... .|.. ..|+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 80 FVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAF-------------------VDGGQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred EEEeccccCCCCChhhhCcCcccCCCCCc--ccCC-------------------CCCceEEEEEcchhhCceEECCCCCC
Confidence 99886677899999999999988886432 1111 12599999999975 9999999998
Q ss_pred hhhhh-----hhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 168 LEKIC-----LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 168 ~~~aa-----~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++.+. ++...+.+||+++ ..+.+++|++|+|.|+|.+|++++|+|+++|++.++++++++++.+.++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 83221 2335678999987 57889999999998889999999999999999668999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEee
Q 017052 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSL 320 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 320 (378)
+++. ...+.+.+.+++++ ++|+++|++|++..+..++++++.+ |+++.+|..... ..+.. ..+.++.++.+..
T Consensus 218 ~~~~--~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 218 VAER--GEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAGGP 292 (345)
T ss_pred ecCC--cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEEec
Confidence 9886 45677788887776 8999999998877889999999997 999999876532 23333 3345688887643
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
... .+.+.++++++.++.+.+...+.+.++++++++|++.+++++..|++|+.
T Consensus 293 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 293 APV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred CCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 221 34688999999999987755567899999999999999887777999863
No 56
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.8e-41 Score=313.10 Aligned_cols=326 Identities=26% Similarity=0.387 Sum_probs=273.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.++++++++++.|.|.+.++|++||++++++|++|+....|.. .+|.++|+|++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 7899999999889999999999999999999999999999998877743 4567899999999999999998899999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|..|..+.++.|...... |.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~ 139 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY--GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSDE 139 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc--ccc-------------------cCceeeeeeecchhceEECCCCCCHH
Confidence 999998899999999999999999886432 211 13699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.+++.+.+||+++... .++++++|||+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++ ++++++.+
T Consensus 140 ~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-- 214 (334)
T PRK13771 140 GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-- 214 (334)
T ss_pred HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--
Confidence 9999999999999998554 8999999999998 9999999999999999 899999999999999888 66666542
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe--eeccccccccccEEEEeeeccCCc
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
++.+.++++ +++|+++||+|+ .....++++++++ |+++.+|....... ..+... +.+++++.+.... .
T Consensus 215 --~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~ 284 (334)
T PRK13771 215 --KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHISA---T 284 (334)
T ss_pred --hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecCC---C
Confidence 455556654 379999999998 5678999999997 99999997643222 222222 3467777766421 2
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.++++++++++.++.++. .+.+.|+++++++|++.+++++.. |+++..
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 456889999999998754 367889999999999999987766 988864
No 57
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-40 Score=312.63 Aligned_cols=313 Identities=21% Similarity=0.266 Sum_probs=250.9
Q ss_pred cccceeeEEeecCCCC------eEEEEe---ecC-CCCCCcEEEEEeEEecCcccccccccCC---CCCccccc--ceeE
Q 017052 9 QVITCKAAVAWGAGQP------LVVEEV---EVN-PPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGH--EASG 73 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~------~~~~~~---~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~--e~~G 73 (378)
.+.++|.+++-+..+. |++.+. +.| ++++|||||||.++++|+.|+....+.. .+|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 4456788888554421 777663 555 3589999999999999999886443311 35889997 8899
Q ss_pred EEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEE
Q 017052 74 IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTV 153 (378)
Q Consensus 74 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~ 153 (378)
+|+.+|+++.+|++||+|+.. |+|+||++
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~~~aey~~ 113 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI---------------------------------------------------TGWEEYSL 113 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec---------------------------------------------------CCcEEEEE
Confidence 999999999999999999764 48999999
Q ss_pred EeCCc--ee--eCCCCCChh-hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 154 VHSGC--AV--KVSSIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 154 v~~~~--~~--~iP~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
++... +. ++|++++++ ++|++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus 114 v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~ 192 (348)
T PLN03154 114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 192 (348)
T ss_pred EeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCC
Confidence 98753 54 459999987 688999999999999988889999999999998 9999999999999999 89999999
Q ss_pred hhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC-ee--
Q 017052 228 PEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EV-- 303 (378)
Q Consensus 228 ~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~-- 303 (378)
+++.+.++ ++|+++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 193 ~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~ 269 (348)
T PLN03154 193 SQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQ 269 (348)
T ss_pred HHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCC
Confidence 99999987 799999998852 2367777877766689999999997 6889999999997 9999999765321 10
Q ss_pred -ecc-ccccccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 304 -AAH-YGLFLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 304 -~~~-~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
... ...+.+++++.|+....+.. .+.++++++++.+|++++. ++++|+|+++++|++.+++++.. |+||++.+
T Consensus 270 ~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 270 GIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred CcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 011 12234678888876543211 2357789999999998754 66789999999999999999887 99998753
No 58
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.9e-40 Score=317.34 Aligned_cols=340 Identities=22% Similarity=0.301 Sum_probs=275.4
Q ss_pred cccceeeEEeec--CCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-------------CCC-ccccc
Q 017052 9 QVITCKAAVAWG--AGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFP-RIFGH 69 (378)
Q Consensus 9 ~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-------------~~p-~~~G~ 69 (378)
.|.+|||+++.. .++| +++.+.+.|.|++++++||+.++++|++|.+...+.. ..| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 467899999954 5543 8999999999999999999999999998876654421 123 27999
Q ss_pred ceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCccccccccccee
Q 017052 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 149 (378)
Q Consensus 70 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 149 (378)
|++|+|+++|+.+..|++||+|++....+|+.|..|+.|..+.|..... .|..+ ..|+|+
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~------------------~~g~~a 143 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYET------------------NFGSFA 143 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--ccccC------------------CCccce
Confidence 9999999999999999999999999999999999999999999965431 22110 136999
Q ss_pred eEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHh--hcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 150 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
||+.++.+.++++|+++++++++.+.+.+.+||+++.. ..++.+|++|||+|+ |.+|++++|+|+.+|+ +++++++
T Consensus 144 e~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~ 222 (398)
T TIGR01751 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVS 222 (398)
T ss_pred EEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcC
Confidence 99999999999999999999999999999999999854 467899999999998 9999999999999999 7888889
Q ss_pred ChhhHHHHHhCCCcEEeCCCCCC--------------------chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhc
Q 017052 227 NPEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC 285 (378)
Q Consensus 227 ~~~~~~~l~~~g~~~vi~~~~~~--------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~ 285 (378)
++++.+.++++|++.++++++.+ ..+.+.+.+++.+ ++|++|||+|. ..+..++++++
T Consensus 223 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~ 301 (398)
T TIGR01751 223 SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCR 301 (398)
T ss_pred CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhc
Confidence 99999999999999999875310 1355667777776 89999999996 67888999999
Q ss_pred cCCccEEEeccCCCC-CeeeccccccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHh
Q 017052 286 DGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364 (378)
Q Consensus 286 ~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l 364 (378)
++ |+++.+|..... ..+++.. .+..+.++.+..+.. .++++++++++.++.+... +.+++++++++++++.+
T Consensus 302 ~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~ 374 (398)
T TIGR01751 302 RG-GMVVICGGTTGYNHDYDNRY-LWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDV 374 (398)
T ss_pred cC-CEEEEEccccCCCCCcCHHH-HhhcccEEEccccCc---HHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHH
Confidence 97 999999876532 1222211 123455666655433 2357889999999987643 67899999999999999
Q ss_pred hcCcee-EEEEeCC
Q 017052 365 KEGKCL-RSVIHMP 377 (378)
Q Consensus 365 ~~~~~~-kvvi~~~ 377 (378)
.+++.. |+++++.
T Consensus 375 ~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 375 HRNHHQGNVAVLVL 388 (398)
T ss_pred HcCCCCceEEEEeC
Confidence 988876 9998753
No 59
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.6e-40 Score=313.07 Aligned_cols=344 Identities=25% Similarity=0.359 Sum_probs=272.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
||++++.+++ +++++++++|.+ +++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGD 79 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence 6899998887 599999999996 79999999999999999999887754 3588999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|+..+..+|+.|..|+.+..+.|........| . ..|- +. .....|+|+||+.+|.+ .++++|++++
T Consensus 80 ~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~-~-~~~~--~~-------~~~~~g~~a~y~~v~~~~~~~~~lP~~~~ 148 (375)
T cd08282 80 RVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG-G-AYGY--VD-------MGPYGGGQAEYLRVPYADFNLLKLPDRDG 148 (375)
T ss_pred EEEEeCCCCCCCCHHHHCcCcccCCCCCccccc-c-cccc--cc-------cCCCCCeeeeEEEeecccCcEEECCCCCC
Confidence 999999999999999999999999764321100 0 0000 00 00013699999999976 8999999999
Q ss_pred hh---hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 168 LE---KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 168 ~~---~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++ +++.+...++|||+++ ..+++++|++|||.|+|.+|++++|+|+++|+.+++++++++++.+.++++|+ ..++
T Consensus 149 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~ 226 (375)
T cd08282 149 AKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPID 226 (375)
T ss_pred hhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEec
Confidence 98 5677888899999998 78899999999998889999999999999997578889999999999999998 4556
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChH-----------HHHHHHHHhccCCccEEEeccCCCCCe-----------
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTG-----------MITTALQSCCDGWGLAVTLGVPKLKPE----------- 302 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~~~----------- 302 (378)
++ +.++.+.+.+++++++|+++||+|+.. .+..++++++++ |+++.+|.......
T Consensus 227 ~~--~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~ 303 (375)
T cd08282 227 FS--DGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGE 303 (375)
T ss_pred cC--cccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCcc
Confidence 65 456777788776668999999998742 478899999997 99998876532110
Q ss_pred eecccccc-ccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 303 VAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 303 ~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..+....+ .++.++.+... ...+.+.++++++.++.+++...+.++|+++++++|++.+.+++..|+++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 304 LSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 11111111 23444443321 1235688899999999988755578999999999999999988833999863
No 60
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.8e-40 Score=309.31 Aligned_cols=322 Identities=24% Similarity=0.380 Sum_probs=260.9
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC--------------CCCCcccccceeEEEEEe
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------------AIFPRIFGHEASGIVESV 78 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------------~~~p~~~G~e~~G~V~~v 78 (378)
|||+++..+ ++++++.+.|++++++|+|||.++++|++|+..+.|. ..+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 789999866 6999999999999999999999999999999888762 124778999999999999
Q ss_pred CCCCCc-CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 79 GPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 79 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
|+++.. |++||+|+..+...|+.|..|..|.. . ...|+|+||+.++.+
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~---------------~----------------~~~g~~~~~~~v~~~ 127 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS---------------P----------------EAPGGYAEYMLLSEA 127 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC---------------c----------------CCCCceeeeEEechH
Confidence 999987 99999999999999999999943210 0 013599999999999
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
.++++|+++++++++ ++..+++||+++ ..+++++|++|||+|+|.+|++++|+|+.+|+..++++++++++.+.++++
T Consensus 128 ~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~ 205 (341)
T cd08262 128 LLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205 (341)
T ss_pred HeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHc
Confidence 999999999999887 566888999985 888999999999998899999999999999996688888899999999999
Q ss_pred CCcEEeCCCCCCc--hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccccccc
Q 017052 238 GVTEFLNPNDNNE--PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 314 (378)
Q Consensus 238 g~~~vi~~~~~~~--~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 314 (378)
|++++++++..+. .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.......+.. ...+.+++
T Consensus 206 g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~~ 282 (341)
T cd08262 206 GADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKEL 282 (341)
T ss_pred CCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcce
Confidence 9988888753111 222 34444455 8999999998755778899999997 99999987643222211 11124566
Q ss_pred EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 315 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
++.+..... .+.+.++++++.++.+.+.+.+.+.++++++++|++.+++++.. |++++
T Consensus 283 ~~~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 283 TLQFSLGYT---PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred EEEEEeccc---HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 665443221 24688899999999988766677899999999999999988776 98874
No 61
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=6.2e-40 Score=307.51 Aligned_cols=332 Identities=28% Similarity=0.401 Sum_probs=271.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.+++....+++.+.|++.++||+|||+++++|++|+..+.|.. ..|.++|||++|+|+++|+++..|++||+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 80 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDR 80 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCE
Confidence 8999999988754489999999999999999999999999998887753 24678999999999999999999999999
Q ss_pred EEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|++.+ ..+|+.|..|..+..+.|..... .|+. ..|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 81 VSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYT-------------------VDGGMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEccCCCCCCCChhhcCCCcccCCCccc--cCcc-------------------ccCcceeEEEEchHHeEeCCCCCCHH
Confidence 98754 66799999999999999987653 2221 12599999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.++..+.|||+++ +.+.+++|++|||+|+|++|++++++|+. .|+ +++++++++++.+.++++|++.++++..
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999998 78899999999999999999999999998 499 8999999999999999999998888742
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
..++.+.+++..+ ++|.++++.++...+..++++++.+ |+++.+|.......+... ....+..++.++.... .+
T Consensus 217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~ 290 (338)
T PRK09422 217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDLSIP-RLVLDGIEVVGSLVGT---RQ 290 (338)
T ss_pred cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCceecHH-HHhhcCcEEEEecCCC---HH
Confidence 2456667777665 6885554445557889999999997 999999865432222211 1223466666554322 34
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.+..+++++.++.+.. .+ ..++++++++|++.+.+++.. |+++.+.
T Consensus 291 ~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 291 DLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 6888999999998754 34 458999999999999988877 9998764
No 62
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.7e-40 Score=306.53 Aligned_cols=333 Identities=32% Similarity=0.436 Sum_probs=271.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC------CCCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+++..+.+.+.+.|.|++++++||++++++|+.|+..+.+. ..+|.++|+|++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 789999988867999999999999999999999999999998874331 13567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+..+|+.|..|..++++.|+.. ...|.. ..|+|++|++++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------~~g~~~~~v~v~~~~~~~lP~~~ 139 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNT--KILGVD-------------------TDGCFAEYVVVPEENLWKNDKDI 139 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCccc--ceEecc-------------------CCCcceEEEEechHHcEECcCCC
Confidence 999999999999999999999999999763 333322 13599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++.+ ++...+.++++++. ...++|++|||.|+|.+|++++|+|+.+|..+++++++++++.+.++++|++++++++
T Consensus 140 ~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (341)
T cd05281 140 PPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR 216 (341)
T ss_pred CHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence 98554 56667888888764 4567899999988899999999999999985688888899999999999998888775
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
..++. .+.++.++ ++|++||++|+......++++++++ |+++.+|.......+.+....+.+++.+.+.... .
T Consensus 217 --~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 290 (341)
T cd05281 217 --EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR--K 290 (341)
T ss_pred --cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--C
Confidence 44566 77777776 8999999998877888999999997 9999998654322222222233456666655421 1
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..+.+.++++++.++.+.+.+.+...++++++++||+.+.+++ . |++++.
T Consensus 291 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 291 MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 1245778999999999876556778899999999999999888 6 998863
No 63
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.4e-40 Score=307.56 Aligned_cols=329 Identities=30% Similarity=0.468 Sum_probs=268.8
Q ss_pred eEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 15 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|++++++. .+.+++.+.|.+.++||+|||.++++|+.|.+.+.+.. .+|.++|+|++|+|+++|+++.+|++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 46778885 49999999999999999999999999999987653211 346789999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|++.+..+|+.|..|+.|.++.|.+.... +.. ...|+|++|+.++.+.++++|+++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~~ 139 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATP------------------PVDGTLCRYVNHPADFCHKLPDNVSL 139 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccc------------------cCCCceeeeEEecHHHcEECcCCCCH
Confidence 9999999999999999999999999764321 000 01359999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++++.+ ..+.+||+++ +.+.+++|++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++++++++
T Consensus 140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~-- 215 (343)
T cd05285 140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVR-- 215 (343)
T ss_pred HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccc--
Confidence 999877 4788999986 889999999999998899999999999999994489999999999999999999999876
Q ss_pred Cch---HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 249 NEP---VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 249 ~~~---~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
..+ +.+.+.+.+.+ ++|++|||+|+...+...+++++++ |+++.+|.......+++. ....+++++.+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 291 (343)
T cd05285 216 TEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY-- 291 (343)
T ss_pred cccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC--
Confidence 334 36677777776 8999999999865788999999997 999999865432222222 122346666655322
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEE
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVI 374 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi 374 (378)
.+.+.++++++.++.+.+.+.+.++|+++++.+|++.+.+++. .|++|
T Consensus 292 --~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 --ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred --hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2468889999999987654556788999999999999998753 59988
No 64
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.2e-39 Score=306.18 Aligned_cols=334 Identities=29% Similarity=0.461 Sum_probs=275.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.+.++ +.+++.+.|+++++||+||+.++++|+.|+....+.+ .+|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~ 79 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence 78999999875 9999999999999999999999999999998876643 35788999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+...|+.|.+|..++...|...... |.. ..|+|++|+.+|.+.++++|+++++++
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 80 VAVNPLLPCGKCEYCKKGEYSLCSNYDYI--GSR-------------------RDGAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEcCCCCCCCChhHHCcChhhCCCcceE--ecc-------------------cCCcccceEEechHHeEECcCCCCHHH
Confidence 99999999999999999999888876432 111 236999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
+|.+ ..+++||+++. ...++++++|||+|+|.+|++++|+|+.+|+..++++++++++.+.++++|++.+++++ ..
T Consensus 139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~--~~ 214 (343)
T cd08236 139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK--EE 214 (343)
T ss_pred HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc--cc
Confidence 9887 57889999984 78899999999998899999999999999994499999999999999999998888876 33
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc--cccccccEEEEeeeccCC--
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY--GLFLSGRTLKGSLFGGWK-- 325 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~~~-- 325 (378)
. .+.+.++.++ ++|++|||+|+...+..++++++++ |+++.+|.......+.... ..+.++.++.++......
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF 292 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc
Confidence 4 6667777766 7999999998767888999999997 9999998664322122111 112457777777653211
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhc-Ccee-EEEE
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE-GKCL-RSVI 374 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~-~~~~-kvvi 374 (378)
..+.+.++++++.++.+.+.+.+.+.+++++++++++.+++ +... |+|+
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 293 PGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred chhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 13468889999999987644446788999999999999998 5555 7764
No 65
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=9.9e-40 Score=310.93 Aligned_cols=333 Identities=28% Similarity=0.408 Sum_probs=267.3
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC----------CCCCcccccceeEEEEEeCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~~vG~~v 82 (378)
+.+.++.. . ++++.+.+.|.+++++|+|||+++++|++|++.+.+. ..+|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 44444443 3 4999999999999999999999999999998877521 1346899999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
..|++||+|++.+..+|+.|..|..|.++.|..... .|+. . .|+|++|+.++.+.++++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~------------------~g~~~~~v~v~~~~~~~l 165 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFS-A------------------DGAFAEYIAVNARYAWEI 165 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeec-C------------------CCcceeeEEechHHeEEC
Confidence 999999999999999999999999999999986542 2221 1 259999999999999999
Q ss_pred CCCC-------ChhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 163 SSIA-------PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 163 P~~l-------~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
|+++ +++ +|+++.++++||+++... .++++|++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.+
T Consensus 166 P~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~ 244 (384)
T cd08265 166 NELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA 244 (384)
T ss_pred CccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 9864 444 566667889999998666 6899999999998899999999999999986799999999999999
Q ss_pred HhCCCcEEeCCCCC-CchHHHHHHHHhCC-CccEEEeccCCh-HHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-
Q 017052 235 KAFGVTEFLNPNDN-NEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF- 310 (378)
Q Consensus 235 ~~~g~~~vi~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~- 310 (378)
+++|+++++++++. ..++.+.+.+++.+ ++|+|+|++|++ ..+..++++++++ |+++.+|..... ..+....+
T Consensus 245 ~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 321 (384)
T cd08265 245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQ 321 (384)
T ss_pred HHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHh
Confidence 99999998877531 22677788888877 899999999863 4678899999997 999999865432 22222222
Q ss_pred ccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
.+..++.+..... ....+.++++++.++.+++..++.+.|+++++++|++.+.++...|+++
T Consensus 322 ~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 322 VRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 3355666554211 1246889999999999876655678899999999999976665448875
No 66
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.4e-39 Score=304.93 Aligned_cols=331 Identities=29% Similarity=0.449 Sum_probs=277.4
Q ss_pred eeeEEeecCCCC-eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|.....|.. .+|.++|+|++|+|+.+|+++..|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999988 6888888899999999999999999999998887754 34778999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|+..+..+|+.|..|..++.+.|...... |.. ..|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~ 139 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLG-------------------IDGGFAEYIVVPARALVPVPDGVP 139 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccc-------------------cCCcceeeEEechHHeEECCCCCC
Confidence 99999999999999999999999999654321 211 125999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..++|||+++.....++++++|||.|+|.+|++++++|+..|+ +|+++++++++.+.++++|.+++++..
T Consensus 140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~- 217 (338)
T cd08254 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL- 217 (338)
T ss_pred HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC-
Confidence 999999999999999998778889999999998889999999999999999 799999999999999999998888765
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
...+.+.+ ....+ ++|+++||+|....+..++++++++ |+++.+|.......++.. ..+.++.++.++... .
T Consensus 218 -~~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~ 290 (338)
T cd08254 218 -DDSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLS-DLIARELRIIGSFGG---T 290 (338)
T ss_pred -CcCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHH-HHhhCccEEEEeccC---C
Confidence 34555555 44555 8999999998777889999999997 999999875433223222 122346666665432 2
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+..+++++.++.+.+. .+.++++++.++++.+.+++.. |+++++
T Consensus 291 ~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 3568889999999988764 4789999999999999988876 998864
No 67
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1e-39 Score=305.85 Aligned_cols=331 Identities=23% Similarity=0.376 Sum_probs=272.0
Q ss_pred eeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|+++.++.+..+++++.+.|++.++|++||+.++++|++|++.+.|.. .+|.++|||++|+|+++|+.+..|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 578888888779999999999999999999999999999999887754 45789999999999999999999999999
Q ss_pred EE-eecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VL-TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|+ .....+|++|..|.++..+.|........|.. .. .....|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~ 146 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKY-PD-------------GTITQGGYADHIVVDERFVFKIPEGLDSA 146 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccc-cC-------------CCcCCCcceeEEEechhheEECCCCCCHH
Confidence 97 45567899999999999999977543221110 00 01124699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+.+.+.+||+++ +..++++|++|+|.|+|.+|++++++|+.+|+ +++++++++++.+.++++|++.+++.. .
T Consensus 147 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~--~ 222 (337)
T cd05283 147 AAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK--D 222 (337)
T ss_pred HhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc--c
Confidence 9999999999999987 45568999999998889999999999999999 899999999999999999999888765 2
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCcCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~ 328 (378)
.++.. . ..+++|++|||+|+......++++++++ |+++.+|...... .++... +.++.++.+..... .+
T Consensus 223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~~ 292 (337)
T cd05283 223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---RK 292 (337)
T ss_pred hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---HH
Confidence 22222 1 1348999999999865588999999997 9999998765322 222222 34688888876543 35
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
++.++++++.++++++ .+ +.|+++++++||+.+++++.. |+|++
T Consensus 293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 7888999999998754 34 789999999999999999886 98874
No 68
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=7.2e-40 Score=305.16 Aligned_cols=306 Identities=21% Similarity=0.291 Sum_probs=257.3
Q ss_pred eeeEEeecCCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 13 CKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
|||+++.+++.| +++++.+.|.+.++||+|||+++++|++|+..+.|.. ..|.++|||++|+|+++|+++.+|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 789999888764 7889999999999999999999999999998887753 346789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|++... .|+|++|+.++...++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 81 QVGQRVAVAPV------------------------------------------------HGTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred CCCCEEEeccC------------------------------------------------CCcceeEEEEchHHeEECCCC
Confidence 99999987620 258999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+++++++.+++...+||+++ +.+++++|++|||+|+ |.+|++++|+|+.+|+ .++++.+++++.+.++++|++++++
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVS 190 (324)
T ss_pred CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEc
Confidence 99999999998999999987 5688999999999987 9999999999999999 8888888888888888899988888
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~ 322 (378)
.. +.++.+.+.+++.+ ++|++|||+|+ .....++++++++ |+++.+|.... ....+... .+.++.++.++...
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08292 191 TE--QPGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMSG-EPMQISSGDLIFKQATVRGFWGG 265 (324)
T ss_pred CC--CchHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCCC-CCCcCCHHHHhhCCCEEEEEEcH
Confidence 76 56788889988887 99999999998 4678899999997 99999987532 22333321 23468888877654
Q ss_pred cCCc-------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKP-------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.+.. .+.+.++++++.++.+.+. +.+.|+++++.+|++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 266 RWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 3211 2357789999999998754 46789999999999999887666 88864
No 69
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.2e-39 Score=303.04 Aligned_cols=331 Identities=29% Similarity=0.431 Sum_probs=277.5
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCC----CCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI----FPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|||+++.+++ ..+++++.+.|.+.+++++||+.++++|++|...+.|... .|.++|+|++|+|+++|+++..|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7999999887 3499999999999999999999999999999988877542 3668899999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+ ..+|+.|.+|..+..+.|...... |.. ..|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~s~~~~~~~~~~~lp~~~ 139 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYT-------------------VDGTFAEYAIADARYVTPIPDGL 139 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 99999875 678999999999999999776432 211 13589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +++++.+++++.+.++++|++.++++
T Consensus 140 ~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~ 217 (341)
T cd08297 140 SFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDF 217 (341)
T ss_pred CHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcC
Confidence 999999999999999999854 58999999999988 7799999999999999 89999999999999999999999888
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
+ ..++.+.+.+++++ ++|+++|+.++...+..++++++.+ |+++.+|.... ...++....+ .++.++.+.....
T Consensus 218 ~--~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (341)
T cd08297 218 K--KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT 293 (341)
T ss_pred C--CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC
Confidence 6 44677888888766 8999999877768889999999997 99999986553 2223322221 4577776654321
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.++.+++++.++.+.+ .+ ..|+++++++|++.+.+++.. |+++++
T Consensus 294 ---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 ---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 356888999999998764 23 679999999999999988876 999875
No 70
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4e-40 Score=282.02 Aligned_cols=314 Identities=21% Similarity=0.311 Sum_probs=252.9
Q ss_pred cccceeeEEeecCCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCC
Q 017052 9 QVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~ 81 (378)
++...|++++.+.|.| +++++.++|....++|+||.+|+.||++|+..+.|.| .+|.+-|.|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 6778899999999988 8888999998888889999999999999999999988 57889999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+.+|++||+|+... . +.|+|++|.+.+++.+++
T Consensus 96 vkgfk~Gd~VIp~~-------------------------------a----------------~lGtW~t~~v~~e~~Li~ 128 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLS-------------------------------A----------------NLGTWRTEAVFSESDLIK 128 (354)
T ss_pred cCccCCCCeEeecC-------------------------------C----------------CCccceeeEeecccceEE
Confidence 99999999998772 1 247999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHh
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKA 236 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~----l~~ 236 (378)
+++.++++.||.+....+|||..|...-++++|++|+-+|| +++|++.+|+|++.|+ +.|.+.|+....+. |+.
T Consensus 129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~ 207 (354)
T KOG0025|consen 129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKS 207 (354)
T ss_pred cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHH
Confidence 99999999999999999999999988889999999999999 9999999999999999 77777787766554 456
Q ss_pred CCCcEEeCCCC-CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccE
Q 017052 237 FGVTEFLNPND-NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRT 315 (378)
Q Consensus 237 ~g~~~vi~~~~-~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 315 (378)
+|+++|+.-++ .+........ ...++.+.|||+|+. ...+..+.|.++ |.++.+|..+.++..-.....+++++.
T Consensus 208 lGA~~ViTeeel~~~~~~k~~~--~~~~prLalNcVGGk-sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~ 283 (354)
T KOG0025|consen 208 LGATEVITEEELRDRKMKKFKG--DNPRPRLALNCVGGK-SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLK 283 (354)
T ss_pred cCCceEecHHHhcchhhhhhhc--cCCCceEEEeccCch-hHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccce
Confidence 99999985431 1111111111 122789999999994 556788899997 999999998875422222333478999
Q ss_pred EEEeeeccCCcCC--------cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 316 LKGSLFGGWKPKT--------DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 316 i~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
++|+++..|.... -+.++.++++.|++..+.. ...+|++...|++....... .|-+|.+
T Consensus 284 ~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~--e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 284 LRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNC--EKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccc--eeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 9999998886422 2456788889999876533 56788888888885544332 2444443
No 71
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1e-39 Score=304.76 Aligned_cols=304 Identities=20% Similarity=0.245 Sum_probs=245.8
Q ss_pred ceeeEEeecC--CCC----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcC
Q 017052 12 TCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 12 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
.||||++.+. +.+ +++++.+.|+|++|||+|||++++||+.|........++|.++|+|++|+|++ .+..|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~---~~~~~ 78 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIES---KNSKF 78 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEec---CCCCC
Confidence 6999999993 443 88899999999999999999999999987653322224688999999999995 44679
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC---ceeeC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG---CAVKV 162 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~i 162 (378)
++||+|+.. ++|++|+.++.+ .++++
T Consensus 79 ~~Gd~V~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~i 107 (329)
T cd08294 79 PVGTIVVAS---------------------------------------------------FGWRTHTVSDGKDQPDLYKL 107 (329)
T ss_pred CCCCEEEee---------------------------------------------------CCeeeEEEECCccccceEEC
Confidence 999999864 379999999999 99999
Q ss_pred CCCCC--h---hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 163 SSIAP--L---EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 163 P~~l~--~---~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
|++++ + ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++
T Consensus 108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE 186 (329)
T ss_pred CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 99998 2 3334678899999999988899999999999986 9999999999999999 89999999999999999
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC--ee---e-cccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV---A-AHYGLF 310 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~---~-~~~~~~ 310 (378)
+|++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|...... .. . +....+
T Consensus 187 ~Ga~~vi~~~--~~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T cd08294 187 LGFDAVFNYK--TVSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETII 262 (329)
T ss_pred cCCCEEEeCC--CccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHh
Confidence 9999999886 5677788887776689999999998 6789999999997 9999998543211 11 1 111223
Q ss_pred ccccEEEEeeeccCC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 311 LSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+++++.++....+. ..+.+.++++++.++.+++. +..+|+++++++|++.+++++.. |+++++
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 263 FKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 457777776543321 11236678899999998765 33568999999999999998876 999864
No 72
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=7.3e-40 Score=306.94 Aligned_cols=306 Identities=20% Similarity=0.239 Sum_probs=247.0
Q ss_pred eeeEEeecCCC-CeEEEEeec----CCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccce--eEEEEEeCCC
Q 017052 13 CKAAVAWGAGQ-PLVVEEVEV----NPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEA--SGIVESVGPG 81 (378)
Q Consensus 13 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~--~G~V~~vG~~ 81 (378)
+|+|....+.. .|++++.++ |+|++|||||||+|++||+.|++.+.|.. .+|+++|+++ .|.+..+|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 56676545443 288998887 78999999999999999999999887742 3577889754 4566667888
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC-Ccee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAV 160 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~ 160 (378)
+..|++||+|+.+ |+|+||+++|+ ..++
T Consensus 88 v~~~~vGd~V~~~---------------------------------------------------g~~aey~~v~~~~~~~ 116 (338)
T cd08295 88 NPDFKVGDLVWGF---------------------------------------------------TGWEEYSLIPRGQDLR 116 (338)
T ss_pred CCCCCCCCEEEec---------------------------------------------------CCceeEEEecchhcee
Confidence 8899999999755 48999999999 7999
Q ss_pred eCC-CCCChh-hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-
Q 017052 161 KVS-SIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA- 236 (378)
Q Consensus 161 ~iP-~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~- 236 (378)
++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++
T Consensus 117 ~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~ 195 (338)
T cd08295 117 KIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNK 195 (338)
T ss_pred ecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh
Confidence 995 678887 799999999999999988889999999999998 9999999999999999 89999999999999998
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe------eecccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE------VAAHYGLF 310 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~------~~~~~~~~ 310 (378)
+|+++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|....... .++ ...+
T Consensus 196 lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~~ 271 (338)
T cd08295 196 LGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNII 271 (338)
T ss_pred cCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHHh
Confidence 99999998752 2367777777765689999999997 6789999999997 99999986543211 111 1222
Q ss_pred ccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 311 LSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+++++.++....+.. .+.+.++++++.++.+++. +...|+++++++|++.+++++.. |+++++
T Consensus 272 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 272 YKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 4567777755433211 1236778899999998765 44679999999999999988876 999874
No 73
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=6.5e-39 Score=299.62 Aligned_cols=326 Identities=31% Similarity=0.485 Sum_probs=270.1
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++..+++++.+.+.|.|.+.+++|+|+++++++|++|+....|.. ..|.++|+|++|+|+++|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 7899998866679999999999999999999999999999998887743 3467899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+++...+|+.|..|..+.++.|.... .+|.. ..|+|++|+.++...++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~~ 139 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA--EYGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSDE 139 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc--ccccc-------------------cCCeeeeEEEechhheEECCCCCCHH
Confidence 9999998899999999999999998752 23321 23699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.+++++.+||+++.. +.+++++++||+|+ |.+|++++++|+..|+ .++++.+++++.+.+++++.+.+++..
T Consensus 140 ~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (332)
T cd08259 140 SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-- 215 (332)
T ss_pred HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH--
Confidence 999999999999999865 88999999999998 9999999999999999 889888999999999999988777654
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe-eeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+ +.+.+.+.. ++|+++|++|. .....++++++++ |+++.++....... +..... ..++.++.++... ..
T Consensus 216 ~--~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~ 285 (332)
T cd08259 216 K--FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLL-ILKEIRIIGSISA---TK 285 (332)
T ss_pred H--HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHH-HhCCcEEEEecCC---CH
Confidence 2 555555543 79999999997 4578899999986 99999987543221 122212 1346666555321 23
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..++++++++.++.+.+. +.+.|+++++++|++.+.+++.. |++++
T Consensus 286 ~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 286 ADVEEALKLVKEGKIKPV--IDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHcCCCccc--eeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 467889999999987543 67899999999999999988876 88874
No 74
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.2e-39 Score=301.02 Aligned_cols=291 Identities=18% Similarity=0.242 Sum_probs=235.6
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcc
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ 104 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~ 104 (378)
+++.+.+.|.|++|||||||.++++|+.|..-.......|.++|.|++|+|+++|+ .|++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe----------
Confidence 88899999999999999999999999976543322224578999999999999874 59999999865
Q ss_pred cccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC----CCCCChhhh-hhhchhhh
Q 017052 105 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV----SSIAPLEKI-CLLSCGLS 179 (378)
Q Consensus 105 c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i----P~~l~~~~a-a~~~~~~~ 179 (378)
++|++|+.++.+.+.++ |++++++++ +++++++.
T Consensus 86 -----------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~ 124 (325)
T TIGR02825 86 -----------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGL 124 (325)
T ss_pred -----------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHH
Confidence 36999999999888777 999999997 67899999
Q ss_pred hhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|+++++++++ ...+.+.++.
T Consensus 125 TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 202 (325)
T TIGR02825 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-VKSLEETLKK 202 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc-cccHHHHHHH
Confidence 99999888899999999999986 9999999999999999 8999999999999999999999998862 1356566666
Q ss_pred HhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC---Ceee---ccccccccccEEEEeeeccCCc---CCc
Q 017052 259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA---AHYGLFLSGRTLKGSLFGGWKP---KTD 329 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~ 329 (378)
.+++++|++||++|+ ..+..++++++++ |+++.+|..... .... .....+++++++.++....+.. .+.
T Consensus 203 ~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (325)
T TIGR02825 203 ASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA 280 (325)
T ss_pred hCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence 654589999999998 5678999999997 999999865421 1111 1112234567777765432211 235
Q ss_pred HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 330 LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
+.++++++.++++++. +...|+++++++|++.+++++.. |+|++
T Consensus 281 ~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 281 LKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 7789999999998776 45678999999999999988876 98874
No 75
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=6.3e-40 Score=299.10 Aligned_cols=269 Identities=25% Similarity=0.365 Sum_probs=219.9
Q ss_pred ccccceeEEEEEeCCCCC------cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcc
Q 017052 66 IFGHEASGIVESVGPGVT------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~ 139 (378)
++|||++|+|+++|++|+ .|++||||.+.+..+|+.|..|+.|+++.|...... |.....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~----------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS----------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence 589999999999999998 899999999999999999999999999999875432 2110000
Q ss_pred cccccccceeeEEEEeCC-ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC
Q 017052 140 YHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218 (378)
Q Consensus 140 ~~~~~~g~~a~~~~v~~~-~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~ 218 (378)
.....|+|+||+.+|++ .++++|+++++++++.+++...|+|+++ +.....+|++|||+|+|++|++++|+|+.+|+
T Consensus 68 -~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~ 145 (280)
T TIGR03366 68 -GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGA 145 (280)
T ss_pred -CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 00013699999999997 7999999999999999999999999987 55667799999999999999999999999999
Q ss_pred CeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 219 SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 219 ~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++|++++++++|.++++++|++.+++.+ + ..+.+.+++.+ ++|++||++|++..+..++++++++ |+++.+|..
T Consensus 146 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~--~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 220 (280)
T TIGR03366 146 ARVVAADPSPDRRELALSFGATALAEPE--V--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220 (280)
T ss_pred CEEEEECCCHHHHHHHHHcCCcEecCch--h--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence 5599999999999999999999988764 2 24556666666 8999999999888899999999997 999999976
Q ss_pred CCCCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcC--CCCCCcceeeeeccccH
Q 017052 298 KLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDI 357 (378)
Q Consensus 298 ~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~i 357 (378)
.......+.+.. +.+++++.|+.... .++++++++++.++ ++++.++++++|+++++
T Consensus 221 ~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 221 FPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 432233333333 35688998876432 35789999999974 67777889999999874
No 76
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=7.7e-39 Score=300.22 Aligned_cols=328 Identities=28% Similarity=0.428 Sum_probs=262.7
Q ss_pred EeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccc-cCC-----CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 17 VAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 17 ~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
++++.++ +++++.++|.++++||+||+.++++|++|+.... +.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4666665 9999999999999999999999999999987653 321 35778999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+..+|+.|.+|..|+.+.|..... .+..... ....|+|+||+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc--eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999997532 1111000 01236999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
|+. ..++++||+++.+...+ ++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|.+++++++ ..
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~--~~ 220 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLA--RD 220 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCC--ch
Confidence 876 56888999988555555 999999988899999999999999986789998999999999999999988875 22
Q ss_pred hHHHHHHHHh-C-CCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCcC
Q 017052 251 PVQQVIKRIT-D-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 251 ~~~~~i~~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~ 327 (378)
.+ .++. . +++|+++|++|+...+...+++++++ |+++.+|..... ....... +.+++++.+.... .
T Consensus 221 ~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 289 (339)
T cd08232 221 PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFRF----D 289 (339)
T ss_pred hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEecC----H
Confidence 22 2222 2 26999999999766788999999997 999999865422 2222221 3456777665422 3
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.++++++++.++.+.+...+.++|+++++++|++.+.+++.. |+++++
T Consensus 290 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 290 DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 4688899999999987666677899999999999999887765 999874
No 77
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-38 Score=298.41 Aligned_cols=332 Identities=24% Similarity=0.385 Sum_probs=275.3
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++...+.+ +++++.+.|.+.+++|+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 789999854433 7888888888999999999999999999998887753 2477899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|++.+..+|+.|.+|.+++++.|..... .|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-------------------~~g~~~~~~~~~~~~~~~~p~~~ 139 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEH-------------------VDGGYAEYVAVPARNLLPIPDNL 139 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc--cccc-------------------cCcceeEEEEechHHceeCCCCC
Confidence 99999999999999999999999999987533 2221 13589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.+||+++.+...+.++++++|+|+ +.+|++++++++..|+ +++.+++++++.+.++.++.+.+++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 218 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY 218 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec
Confidence 999999999999999999888888999999999988 7999999999999999 78999999999999988888777765
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 323 (378)
. +.++.+.+.+.+.+ ++|+++|++|+ ..+...+++++++ |+++.++..... ...+.. ..+.++.++.+.....
T Consensus 219 ~--~~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 219 R--KEDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred C--ChHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC
Confidence 4 45666677776665 89999999997 5778899999997 999999866542 122222 2234577777665432
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
...+.++++++.++.+.+ .+.+.|+++++++|++.+.+++.. |+++++
T Consensus 294 ---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 ---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 236788889999988654 367889999999999999887766 998863
No 78
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.6e-38 Score=297.52 Aligned_cols=328 Identities=30% Similarity=0.444 Sum_probs=271.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.++++ +++.+.+.|+++++||+||++++++|+.|+....|.. .+|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 78999998885 9999999999999999999999999999999887754 36779999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+...|+.|..|..++.+.|...... |.. ..|+|++|+.++.+.++++|+++++.+
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 80 VAVDPNIYCGECFYCRRGRPNLCENLTAV--GVT-------------------RNGGFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEcCCcCCCCCccccCcChhhCCCccee--ccC-------------------CCCcceeEEEecHHHcEECcCCCCHHH
Confidence 99988888999999999999888887531 111 125999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
++.+ ..+.++++++ ..+++++|++|||+|+|.+|++++++|+..|+.+++++++++++.+.++++|++.++++. ..
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~ 214 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS--RE 214 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC--CC
Confidence 8876 6788999988 888999999999998899999999999999994489999999999999999998888775 33
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcCC
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 328 (378)
++... +.+.+ ++|++||++|+...+...+++++++ |+++.+|.........+....+ .++.++.+.... ..
T Consensus 215 ~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 287 (334)
T cd08234 215 DPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PY 287 (334)
T ss_pred CHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HH
Confidence 44333 33344 8999999998767888999999997 9999998765322333333322 246677665432 24
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.++++++++.++.+.+.+.+.++++++++++|++.+.+ +.. |+++
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 58889999999998765556788999999999999998 554 8876
No 79
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.9e-38 Score=297.58 Aligned_cols=330 Identities=28% Similarity=0.418 Sum_probs=268.1
Q ss_pred eecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 18 AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 18 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
-++++.++++++.+.|.|+++|++|||.++++|++|+.++.+.. .+|.++|+|++|+|+++|+++..|++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 35678889999999999999999999999999999988754321 356789999999999999999999999999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 171 (378)
+..+...|+.|..|..+..+.|..... .|.. ..|+|++|+.++.+.++++|++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI--FGVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce--Eeec-------------------CCCcceeEEEeehHHcEECcCCCChHhh
Confidence 999999999999999999999988643 1211 1359999999999999999999998655
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCch
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
+++..+.+|++++ ....++|++|+|.|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.++++. ..+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~ 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KED 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccC
Confidence 5667888999876 34578999999988899999999999999994488888889999999999998888876 456
Q ss_pred HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcH
Q 017052 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDL 330 (378)
Q Consensus 252 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 330 (378)
+.+.+.++..+ ++|+++||+|+...+...+++++++ |+++.+|.......+.+....+.+++++.+... ....+.+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhH
Confidence 77788887766 8999999998777888999999997 999999876432222222222344666655431 1112457
Q ss_pred HHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 331 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 331 ~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.++++++.++.+++.+.+.+.++++++.++++.+++++..|+++++
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 8899999999987655577899999999999999877645999865
No 80
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1e-38 Score=300.18 Aligned_cols=296 Identities=17% Similarity=0.207 Sum_probs=231.1
Q ss_pred eEEEEeecCCCC-CCcEEEEEeEEecCcccccccc---cC---CCCCcccccceeEEEEEeCCCCCcCCCCCEEEeeccc
Q 017052 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97 (378)
Q Consensus 25 ~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (378)
+++.+.+.|.|. ++||+|||+|+|||+.|..... +. .++|.++|||++|+|+++|+++++|++||+|+.+
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 888999999874 9999999999999998853221 11 1457889999999999999999999999999764
Q ss_pred CCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh----hhh
Q 017052 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK----ICL 173 (378)
Q Consensus 98 ~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~----aa~ 173 (378)
.++|+||++++++.++++|+++++++ +++
T Consensus 100 -----------------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~ 132 (345)
T cd08293 100 -----------------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA 132 (345)
T ss_pred -----------------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence 03799999999999999999864432 456
Q ss_pred hchhhhhhHHHHHhhcCCCCC--CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCC
Q 017052 174 LSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN 249 (378)
Q Consensus 174 ~~~~~~ta~~al~~~~~~~~g--~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~ 249 (378)
++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++++++++ .
T Consensus 133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~--~ 210 (345)
T cd08293 133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK--T 210 (345)
T ss_pred cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC--C
Confidence 777899999998788888877 99999998 9999999999999998569999999999998876 9999999886 5
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-C--ee--eccc--cccc--cccEEEEee
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-P--EV--AAHY--GLFL--SGRTLKGSL 320 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~--~~--~~~~--~~~~--~~~~i~g~~ 320 (378)
.++.+.+++++++++|++||++|+. .+..++++++++ |+++.+|..... . .. .+.. ..+. .++++....
T Consensus 211 ~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08293 211 DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFL 288 (345)
T ss_pred CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEE
Confidence 6788888887766899999999984 578999999997 999999853211 1 10 1110 1111 233333322
Q ss_pred eccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 321 FGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 321 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
...+.. .+.++++++++.++.+++. +...++++++++|++.+++++.. |+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 289 VLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 211110 1235677889999998765 34557999999999999988876 999875
No 81
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.5e-38 Score=296.52 Aligned_cols=318 Identities=27% Similarity=0.333 Sum_probs=256.2
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++..++ +.+++.+.+.|+++++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++|+++..|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD 80 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence 7899998776 458888888888999999999999999999988876532 3477899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|.+|+.|+++.|..... .|.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 81 RVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVV-------------------SNGGYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred EEEECCCcCCCCChhhcCCCccccCccce--eecc-------------------CCCceeeEEEcCHHHceeCCCCCCHH
Confidence 99999988999999999999999987543 2221 13599999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.+++++.+||+++. .+++++|++|+|+|+ |.+|++++++|+.+|+ +++++.+ .+.++++|++++++.+
T Consensus 140 ~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~-- 211 (325)
T cd08264 140 LAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD-- 211 (325)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch--
Confidence 99999999999999984 488999999999998 9999999999999999 7888752 3677889998888764
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (378)
+..+.+++++ +++|+|+|++|+ ..+..++++++++ |+++.+|.... ....+....+ ..+.++.+...+. +
T Consensus 212 --~~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (325)
T cd08264 212 --EVEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---R 282 (325)
T ss_pred --HHHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---H
Confidence 2245566666 689999999997 6888999999997 99999987522 1122222222 2355666554322 3
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EE
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RS 372 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kv 372 (378)
+.++++++++.... . .+.+.|+++++++|++.+.+++.. |+
T Consensus 283 ~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 283 KELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 46788888885333 2 256889999999999999877655 54
No 82
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=8.1e-38 Score=292.07 Aligned_cols=320 Identities=27% Similarity=0.380 Sum_probs=263.6
Q ss_pred eeeEEeecCCC----CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcC
Q 017052 13 CKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 13 ~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
|||+++.+++. ++++++.+.|.++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 78999999884 58888888888999999999999999999998887753 456789999999999999999999
Q ss_pred CCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 86 NEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 86 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
++||+|++.+ ..+|++|..|..+..+.|...... |.. ..|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~ 139 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYT-------------------VDGGYAEYMVADERFAYPIPE 139 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccc-------------------cCCceEEEEEecchhEEECCC
Confidence 9999997654 578999999999999999877643 211 125899999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++.+++.+++.+.|||+++ +.++++++++|||+|+|++|++++++|+..|+ +++++++++++.+.++++|++.+++
T Consensus 140 ~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 217 (329)
T cd08298 140 DYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGD 217 (329)
T ss_pred CCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEec
Confidence 999999999999999999998 88999999999999889999999999999999 8999999999999999999988877
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
.+. . ...++|+++++.+....+..++++++++ |+++.+|.... .....+...+..+..+.+.....
T Consensus 218 ~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~- 283 (329)
T cd08298 218 SDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT- 283 (329)
T ss_pred cCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC-
Confidence 642 1 1237999999877667889999999997 99999885432 11111222223455555544221
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.+.+.++++++.++.+++ +.+.|+++++++|++.+++++.. |+++
T Consensus 284 --~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 284 --RQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --HHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 245788889999988765 25889999999999999988776 7763
No 83
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.3e-37 Score=290.93 Aligned_cols=325 Identities=28% Similarity=0.453 Sum_probs=265.2
Q ss_pred eeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
||+++.++|..+++++.+.|.+.+++++|++.++++|++|+..+.|.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 689999997679999999999999999999999999999998877643 45678999999999999999999999999
Q ss_pred EEeecc-cCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|++.+. .+|+.|.+|.+++++.|...... ++. ..|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPLA 139 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc--Ccc-------------------cCCccccEEEEcHHHeEECCCCCCHH
Confidence 987553 67999999999999999986542 211 12589999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+++.+.+||+++. ...++++++|||+|+|.+|++++++|+..|+ +|+++++++++.+.++++|++.+++.. .
T Consensus 140 ~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~ 215 (330)
T cd08245 140 QAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG--A 215 (330)
T ss_pred HhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC--C
Confidence 99999999999999984 4789999999999888899999999999999 899999999999999999998888764 2
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCc
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 329 (378)
...... ..+++|+++|++++......++++++++ |+++.++..............+.++.++.+..... ...
T Consensus 216 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 287 (330)
T cd08245 216 ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RAD 287 (330)
T ss_pred cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HHH
Confidence 222222 2247999999988767889999999997 99999986543211110111223466666665432 246
Q ss_pred HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 330 LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++++++++.++.+.+ ..+.++++++.+|++.+++++.. |+++
T Consensus 288 ~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 288 LQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 788889999998764 34789999999999999988776 7764
No 84
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-37 Score=293.81 Aligned_cols=320 Identities=27% Similarity=0.318 Sum_probs=253.8
Q ss_pred eeeEEeecCCCC--eEEEE-eecCCCCCCcEEEEEeEEecCcccccccccCC-----------------------CCCcc
Q 017052 13 CKAAVAWGAGQP--LVVEE-VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------------------IFPRI 66 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----------------------~~p~~ 66 (378)
|||+++.+.+.+ +++.+ .+.|.+.+++|+|||.++++|++|+....|.. .+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 789999877653 55654 46777899999999999999999998776532 35688
Q ss_pred cccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCccccccccc
Q 017052 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 146 (378)
Q Consensus 67 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g 146 (378)
+|||++|+|+++|+++..|++||+|+..+..+|+.|..|.. |.. .|.. ..|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~-----~~~~-------------------~~g 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY-----IGSE-------------------RDG 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc-----cCCC-------------------CCc
Confidence 99999999999999999999999999987777777655321 111 1100 125
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
+|++|+.++.+.++++|+++++++++.+++++.|||+++ ...++++|++|||+|+ |.+|++++++|+.+|+ ++++++
T Consensus 132 ~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~ 209 (350)
T cd08274 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVA 209 (350)
T ss_pred cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEe
Confidence 999999999999999999999999999999999999987 7889999999999998 9999999999999999 788887
Q ss_pred CChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeee
Q 017052 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304 (378)
Q Consensus 226 ~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 304 (378)
+++ +.+.++++|++.+++.+ ...+.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|..... ...
T Consensus 210 ~~~-~~~~~~~~g~~~~~~~~--~~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~ 281 (350)
T cd08274 210 GAA-KEEAVRALGADTVILRD--APLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGP-VVE 281 (350)
T ss_pred Cch-hhHHHHhcCCeEEEeCC--CccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCc-ccc
Confidence 665 88888999997665543 233333 444555 89999999997 5788999999997 999999865332 123
Q ss_pred ccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 305 AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 305 ~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.... +.++.++.++.... .+.+.++++++.++.++. .+.+.++++++++|++.+.+++.. |+++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 282 LDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 33333 34577887776532 346888999999998754 366889999999999999887776 988863
No 85
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.9e-37 Score=288.12 Aligned_cols=311 Identities=21% Similarity=0.239 Sum_probs=252.0
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
+||++++.++|.+ +++++++.|.++++||+|||.++|+|++|+....|.+ .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999998865 8889999999999999999999999999998887754 3567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+.... +.|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~-----------------------------------------------~~g~~~~~v~v~~~~~~~lp~~~ 113 (327)
T PRK10754 81 VGDRVVYAQS-----------------------------------------------ALGAYSSVHNVPADKAAILPDAI 113 (327)
T ss_pred CCCEEEECCC-----------------------------------------------CCcceeeEEEcCHHHceeCCCCC
Confidence 9999975410 12589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.+||.++.+...+++|++|+|+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++|++++++.
T Consensus 114 ~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (327)
T PRK10754 114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY 192 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC
Confidence 999999999999999999877788999999999976 9999999999999999 79999999999999999999888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-CeeeccccccccccEE-E-Eeee
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTL-K-GSLF 321 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i-~-g~~~ 321 (378)
+ ..++.+.+++++.+ ++|+++||+|+ ......+++++++ |+++.+|..... ..+.+.... .++..+ . ....
T Consensus 193 ~--~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 267 (327)
T PRK10754 193 R--EENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGPVTGVNLGILN-QKGSLYVTRPSLQ 267 (327)
T ss_pred C--CCcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHHh-ccCceEEecceee
Confidence 5 55677888888887 89999999997 5778899999997 999999876431 112221111 111111 0 0000
Q ss_pred ccCCcC----CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 322 GGWKPK----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 322 ~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..+... +.+.++++++.++.+++...+.+.|+++++++|++.+++++.. |+||+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 268 GYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111111 1244678899999987655556889999999999999988876 99986
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.2e-37 Score=290.62 Aligned_cols=309 Identities=24% Similarity=0.320 Sum_probs=253.7
Q ss_pred eeeEEeecCCCC---eEEEEeecCCCCC-CcEEEEEeEEecCcccccccccCCC--------CCcccccceeEEEEEeCC
Q 017052 13 CKAAVAWGAGQP---LVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWETQAI--------FPRIFGHEASGIVESVGP 80 (378)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~--------~p~~~G~e~~G~V~~vG~ 80 (378)
|||+++.+.+.| +++++.|.|.|.+ ++|+||+.++++|++|+..+.|... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999999876 8999999998888 9999999999999999988877541 566899999999999999
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
++..|++||+|++... ..|+|++|+.++.+.++
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~g~~~~~~~v~~~~~~ 113 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------------------------GLGTWRTHAVVPADDLI 113 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------------------------CCccchheEeccHHHeE
Confidence 9999999999987621 02589999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK 235 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~~l~ 235 (378)
++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |.+|++++|+|+++|+ +++++.+++ ++.+.++
T Consensus 114 ~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~ 192 (341)
T cd08290 114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLK 192 (341)
T ss_pred eCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHH
Confidence 999999999999999999999999877788999999999987 9999999999999999 777776665 6788888
Q ss_pred hCCCcEEeCCCCCCc---hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccc
Q 017052 236 AFGVTEFLNPNDNNE---PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFL 311 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~---~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~ 311 (378)
++|++++++++ .. .+...++.+.++++|++|||+|+ ..+...+++++++ |+++.+|..... ...+.. ..+.
T Consensus 193 ~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~ 267 (341)
T cd08290 193 ALGADHVLTEE--ELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIF 267 (341)
T ss_pred hcCCCEEEeCc--ccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhh
Confidence 99999998875 33 56677777665589999999998 4567889999997 999999865432 222332 2245
Q ss_pred cccEEEEeeeccCCc-------CCcHHHHHHHHHcCCCCCCcceeeee---ccccHHHHHHHhhcCcee-EEEEeC
Q 017052 312 SGRTLKGSLFGGWKP-------KTDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 312 ~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++.++.+.....+.. ...+.++++++.++.+.+. ....+ +++++++|++.+.+++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 688888776543210 1246778889999987754 33556 999999999999888776 999875
No 87
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=4.5e-37 Score=287.84 Aligned_cols=306 Identities=18% Similarity=0.200 Sum_probs=243.5
Q ss_pred eeEEeecC---CCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcC
Q 017052 14 KAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 14 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
||+++.++ +.+ +++.+.|.|+|+++||+|||+++++|++|.....|.. .+|.++|+|++|+|+++|+++..|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888886 443 8888999999999999999999999999998776653 456789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|+..... ...|+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~~---------------------------------------------~~~g~~~~~~~v~~~~~~~ip~~ 115 (336)
T TIGR02817 81 KPGDEVWYAGDI---------------------------------------------DRPGSNAEFHLVDERIVGHKPKS 115 (336)
T ss_pred CCCCEEEEcCCC---------------------------------------------CCCCcccceEEEcHHHcccCCCC
Confidence 999999865100 01259999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCC-----CCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g 238 (378)
+++++++.+++++.|||+++....++++ |++|||+|+ |.+|++++|+|+.+ |+ +|+++++++++.+.++++|
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g 194 (336)
T TIGR02817 116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG 194 (336)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence 9999999999999999999888888877 999999987 99999999999998 99 8999999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKG 318 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 318 (378)
++++++++ . ++.+.+++...+++|+++|++++...+...+++++++ |+++.++... .++..+.. .++.++.+
T Consensus 195 ~~~~~~~~--~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~~~~~~~~-~~~~~~~~ 266 (336)
T TIGR02817 195 AHHVIDHS--K-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA---ELDISPFK-RKSISLHW 266 (336)
T ss_pred CCEEEECC--C-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc---cccchhhh-hcceEEEE
Confidence 99998864 2 5667777754448999999987667889999999997 9999885321 22222111 13355444
Q ss_pred eeec--cCCc-------CCcHHHHHHHHHcCCCCCCcceeeee---ccccHHHHHHHhhcCcee-EEEEe
Q 017052 319 SLFG--GWKP-------KTDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 319 ~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..+. .... ...+.++++++.++.+++. +.+.+ +++++++|++.+++++.. |++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 267 EFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 3221 1100 1236788899999987643 33444 478999999999988776 88874
No 88
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.2e-36 Score=281.06 Aligned_cols=297 Identities=28% Similarity=0.436 Sum_probs=247.0
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||++.++++ +++++++.+.|.+.+++|+|||.++++|++|.....|.. ..|.++|+|++|+|+.+|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 6899998866 349999999999999999999999999999998877754 457889999999999999999999999
Q ss_pred CEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 89 EHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 89 d~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
|+|+..+ ..+|+.|.+|..+....|.... +.|.. ..|+|++|+.++.+.++++|++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~~ 139 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK--GIGTQ-------------------ADGGFAEYVLVPEESLHELPENLS 139 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc--eeeec-------------------CCCceEEEEEcchHHeEECcCCCC
Confidence 9999876 4789999999999999887642 11211 136999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEEeCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++ +...+.+||+++....+++++++|||.|+|.+|++++|+|+.+|+ +++++. +++++.+.++++|++++ ++
T Consensus 140 ~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~ 216 (306)
T cd08258 140 LEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NG 216 (306)
T ss_pred HHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CC
Confidence 99887 667888999999888899999999998779999999999999999 777763 35568888899999888 77
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 323 (378)
. ..++.+.+.++..+ ++|++||++|+...+...+++++++ |+++.+|.... ....+.... +.+++++.|++++.
T Consensus 217 ~--~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 217 G--EEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred C--cCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc
Confidence 5 56777788887766 8999999998767888999999997 99999998752 223333222 25799999988754
Q ss_pred CCcCCcHHHHHHHHHcC
Q 017052 324 WKPKTDLPSLVNRYLKK 340 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~ 340 (378)
.++++++++++++|
T Consensus 293 ---~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 ---PASWETALRLLASG 306 (306)
T ss_pred ---hHhHHHHHHHHhcC
Confidence 45788999888765
No 89
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=8.5e-37 Score=285.17 Aligned_cols=308 Identities=24% Similarity=0.315 Sum_probs=252.1
Q ss_pred ceeeEEeecCCC----CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 12 TCKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 12 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+|||+++.+++. ++++++.+.|.+.++|++|||.++++|++|+....|.. .+|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 599999999886 38899999999999999999999999999998876643 4577899999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
.+++||+|+.. . .|+|++|+.++.+.++++|
T Consensus 81 ~~~~Gd~V~~~-------------------------------~------------------~g~~~s~~~v~~~~~~~ip 111 (329)
T cd08250 81 DFKVGDAVATM-------------------------------S------------------FGAFAEYQVVPARHAVPVP 111 (329)
T ss_pred CCCCCCEEEEe-------------------------------c------------------CcceeEEEEechHHeEECC
Confidence 99999999876 1 2589999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++ ..+++.+++++.+||+++.+...+++|++|+|+|+ |.+|++++|+|+..|+ +++++.+++++.+.++++|++.+
T Consensus 112 ~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 188 (329)
T cd08250 112 EL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRP 188 (329)
T ss_pred CC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceE
Confidence 97 35677888999999999877788999999999997 9999999999999999 79999899999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC---------eeeccccccccc
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP---------EVAAHYGLFLSG 313 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~ 313 (378)
++.+ ..++.+.+....++++|++||++|+ ..+...+++++++ |+++.+|...... ...+....+.++
T Consensus 189 ~~~~--~~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd08250 189 INYK--TEDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKS 264 (329)
T ss_pred EeCC--CccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcC
Confidence 8765 4456666666554589999999997 6888999999997 9999998764320 112223334557
Q ss_pred cEEEEeeeccCC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 314 RTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 314 ~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.++.+..+.... ..+.+.++++++.++.+++...+.+.++++++++|++.+++++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 788776543211 123467788899999877643344668999999999999988776 88864
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.1e-36 Score=281.70 Aligned_cols=309 Identities=21% Similarity=0.251 Sum_probs=253.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|||+++++++.+ +++.+.+.|.+.+++|+||+.++++|++|+....|.. .+|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 789999886654 6677777777899999999999999999998876643 23578999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+++||+|++.... ..|+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~----------------------------------------------~~g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08244 81 AWLGRRVVAHTGR----------------------------------------------AGGGYAELAVADVDSLHPVPD 114 (324)
T ss_pred CCCCCEEEEccCC----------------------------------------------CCceeeEEEEEchHHeEeCCC
Confidence 9999999876210 125999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++++++.+++.+.||| ++.+...++++++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.++
T Consensus 115 ~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (324)
T cd08244 115 GLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAV 192 (324)
T ss_pred CCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 999999999999999995 5567889999999999986 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeee
Q 017052 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLF 321 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~ 321 (378)
+.. +.++.+.+.++.++ ++|+++|++|+. ....++++++.+ |+++.+|...... ..++. ..+.++.++.+...
T Consensus 193 ~~~--~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08244 193 DYT--RPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLG 267 (324)
T ss_pred ecC--CccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeec
Confidence 775 55677778877776 899999999985 568899999997 9999998765432 23332 22345778777655
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..... .+.+.++++++.++.+.. .+...|+++++++|++.+++++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 268 VQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 33211 234667888898888754 366889999999999999988776 998864
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.1e-36 Score=281.10 Aligned_cols=328 Identities=25% Similarity=0.355 Sum_probs=265.8
Q ss_pred eeeEEeecCC--CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++..+ +++++.+.+.|.+++++++||+.++++|++|+....|.. ..|.++|||++|+|+++|+.+.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 8999999775 348888888888999999999999999999998877654 2466899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+......|+ .+.++.|.... +.|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~------~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~ 133 (336)
T cd08276 81 VGDRVVPTFFPNWL------DGPPTAEDEAS--ALGGP-------------------IDGVLAEYVVLPEEGLVRAPDHL 133 (336)
T ss_pred CCCEEEEecccccc------ccccccccccc--ccccc-------------------cCceeeeEEEecHHHeEECCCCC
Confidence 99999987655554 34444553321 12211 13589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++.+++.+++.+.+||+++.+...+++|++|+|+|+|++|++++++|+..|+ ++++++.++++.+.++++|.+.+++..
T Consensus 134 ~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (336)
T cd08276 134 SFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYR 212 (336)
T ss_pred CHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCC
Confidence 9999999999999999998777889999999999889999999999999999 799999999999999999999988775
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
. ..++.+.+.+++++ ++|+++|++++ ..+..++++++++ |+++.+|..............+.++.++.+.....
T Consensus 213 ~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (336)
T cd08276 213 T-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-- 287 (336)
T ss_pred c-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc--
Confidence 2 15677788888876 89999999986 6788999999997 99999987654221111222345688888776543
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+.++++++.++.+.+. +.+.+++++++++++.+.+++.. |+++++
T Consensus 288 -~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 -RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred -HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3468888899988876543 45789999999999999887776 888763
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.8e-36 Score=281.13 Aligned_cols=310 Identities=20% Similarity=0.289 Sum_probs=252.9
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
||||+++.+++.+ +++++.+.|++.++|++|||.++++|+.|+....|.. ..|.++|+|++|+|+++|+.+..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999988863 7777778888999999999999999999988877643 234589999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|+.+.. .|+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 81 KEGDRVMALLP------------------------------------------------GGGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred CCCCEEEEecC------------------------------------------------CCceeeEEEecHHHcEeCCCC
Confidence 99999987510 158999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+++++++.+++++.+||+++.+...+++|++|||+|+ |.+|++++++|+.+|+ .++.+.+++++.+.++++|++++++
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIR 191 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 7777889999999999999988887
Q ss_pred CCCCCch-HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeee-cccccc-ccccEEEEee
Q 017052 245 PNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF-LSGRTLKGSL 320 (378)
Q Consensus 245 ~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~ 320 (378)
.. ..+ +.+.+.+.+++ ++|++||++++ ..+..++++++++ |+++.+|.... ..+. +....+ .+..++.++.
T Consensus 192 ~~--~~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T PTZ00354 192 YP--DEEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFST 266 (334)
T ss_pred cC--ChhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeee
Confidence 65 333 67778887766 89999999986 6788999999997 99999986543 2211 332222 3455777765
Q ss_pred eccCCcC-------CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 321 FGGWKPK-------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 321 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
....... +.+.++++++.++.+.+. +.+.+++++++++++.+.+++.. |+++.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 267 LRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 4331110 123567788888887643 56889999999999999887765 9999775
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.4e-35 Score=276.42 Aligned_cols=310 Identities=19% Similarity=0.253 Sum_probs=241.0
Q ss_pred eeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++++++ ++++++.+.|.+++++|+||+.++++|++|+..+.|.. .+|.++|||++|+|+++ .+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999986 69999999999999999999999999999998887754 24778999999999999 456799
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... .|+. ..|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~g~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 116 (325)
T cd05280 79 EGDEVLVTGYD-----------------------LGMN-------------------TDGGFAEYVRVPADWVVPLPEGL 116 (325)
T ss_pred CCCEEEEcccc-----------------------cCCC-------------------CCceeEEEEEEchhhEEECCCCC
Confidence 99999875210 1111 12589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhc--CCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVA--DIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~--~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++++.+++.+.+||+++.... ++. .+++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++++
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 195 (325)
T cd05280 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEV 195 (325)
T ss_pred CHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence 99999999999999999885543 335 3579999998 9999999999999999 79999999999999999999988
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++.. .. .....+....+++|++||++|+ ..+...+++++++ |+++.+|...... ..+....+ .++.++.+...
T Consensus 196 ~~~~--~~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 196 LDRE--DL-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred Ecch--hH-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEEEEEe
Confidence 8764 21 1122222333389999999998 6789999999997 9999998764322 13333333 46888877655
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..... .+.++.+.+++..+.. . .+..+|+++++++|++.+.+++.. |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 270 VNCPMELRKQVWQKLATEWKPDLL-E--IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ecCchhHHHHHHHHHHHHHhcCCc-c--ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 43211 0122334444445522 2 257899999999999999988877 998864
No 94
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.7e-36 Score=276.06 Aligned_cols=297 Identities=21% Similarity=0.270 Sum_probs=242.9
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
||++++.+.+ | +++++.+.|.++++||+||+.++++|+.|.....+. ..|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~ 78 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-PDGAVPGWDAAGVVERAAADGSGPAVGAR 78 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-CCCCcccceeEEEEEEeCCCCCCCCCCCE
Confidence 6899998765 4 677788889999999999999999999998876533 45778999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+... ..|+|++|+.++.+.++++|+++++++
T Consensus 79 V~~~~------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~ 110 (305)
T cd08270 79 VVGLG------------------------------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQ 110 (305)
T ss_pred EEEec------------------------------------------------CCcceeeEEEEchHHeEECCCCCCHHH
Confidence 98761 025899999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
++.+++.+.|||+++.+.... +|++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++|++.+++.. .
T Consensus 111 a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~ 186 (305)
T cd08270 111 AATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG--S 186 (305)
T ss_pred HHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc--c
Confidence 999999999999998655544 5999999998 9999999999999999 899999999999999999987665432 1
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccccc---ccEEEEeeecc-CC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS---GRTLKGSLFGG-WK 325 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~i~g~~~~~-~~ 325 (378)
++..+++|+++|++|+ ..+..++++++.+ |+++.+|.... ....++...+.. +.++.+..+.. ..
T Consensus 187 --------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (305)
T cd08270 187 --------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSSG-EPAVFNPAAFVGGGGGRRLYTFFLYDGEP 255 (305)
T ss_pred --------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccCC-CcccccHHHHhcccccceEEEEEccCHHH
Confidence 1122479999999998 4788999999997 99999987642 223333333333 77777776542 11
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..+.+..+++++.++++.+. +.++++++++++|++.+.+++.. |+++.+
T Consensus 256 ~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 256 LAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 12457888999999998754 66889999999999999988776 999864
No 95
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=5.1e-36 Score=281.00 Aligned_cols=310 Identities=25% Similarity=0.338 Sum_probs=248.1
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++++++ ..+++++.+.|+++++||+||++++++|++|+....+.. ..|.++|+|++|+|+.+|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGD 80 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence 7899999885 338889999999999999999999999999998875542 3577899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+......|+ + ....|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~-------~---------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 81 RVAGFVHGGNP-------N---------------------------------DPRNGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred EEEEEeccccC-------C---------------------------------CCCCCcccceEEechhheEECCCCCCHH
Confidence 99987433221 0 0013699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCC----------CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADI----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~----------~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
+++.+++.+.|||+++.+..++ +++++|||+|+ |.+|++++++|+.+|+ +++++. ++++.+.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999998666544 78999999998 9999999999999999 788876 568889999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhcc--CCccEEEeccCCCCCeeeccccccccccEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD--GWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
++++++.. ..++.+.+++++++++|++||++|++..+..+++++++ + |+++.+|...... .+ ..+.++
T Consensus 199 ~~~v~~~~--~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~-----~~~~~~ 268 (339)
T cd08249 199 ADAVFDYH--DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP-----RKGVKV 268 (339)
T ss_pred CCEEEECC--CchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC-----CCCceE
Confidence 99988876 56777788877766899999999976788999999999 8 9999998765422 11 112222
Q ss_pred EEeeecc------C---CcCCcHHHHHHHHHcCCCCCCcceeeeec--cccHHHHHHHhhcCc-ee-EEEEeC
Q 017052 317 KGSLFGG------W---KPKTDLPSLVNRYLKKEFMVDEFITHNLL--FEDINQAFNLMKEGK-CL-RSVIHM 376 (378)
Q Consensus 317 ~g~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--l~~i~~A~~~l~~~~-~~-kvvi~~ 376 (378)
....... . .....+.++++++.++.+.+.. ...++ ++++++|++.+..++ .. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 269 KFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1111110 0 0112466788899999887653 35566 999999999999888 65 999875
No 96
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=278.73 Aligned_cols=298 Identities=26% Similarity=0.333 Sum_probs=223.9
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCC------------CcCCCCCEEE
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGV------------TEFNEGEHVL 92 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v------------~~~~~Gd~V~ 92 (378)
....+.++|.|.+++++|++.++++|+.|+.+..|.+..+. +|.++.|+|...|+++ ..+..||++.
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~-~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~ 98 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIP-LGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV 98 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCC-CccCCCCccccccCCceeEEeccccccccceEeeeEEe
Confidence 44567889999999999999999999999999988772222 4444444444444433 2334444333
Q ss_pred eecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhh
Q 017052 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (378)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa 172 (378)
.. ...|+|+||+++|...++++|+++++++||
T Consensus 99 ~~------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 99 AF------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred ec------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 22 123699999999999999999999999999
Q ss_pred hhchhhhhhHHHHHhhc------CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 173 LLSCGLSAGLGAAWNVA------DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~------~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++.+..|||.++.... ++++|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999988 8999999999977 9999999999999996 56666699999999999999999999
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-Ceeecc-ccccccccEEEEe----
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH-YGLFLSGRTLKGS---- 319 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~-~~~~~~~~~i~g~---- 319 (378)
+ +.++.+.++..+.++||+||||+|+. .+.....++..+ |+...++..... .+.... .+...+.+.+...
T Consensus 210 ~--~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
T KOG1198|consen 210 K--DENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG 285 (347)
T ss_pred C--CHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence 8 78999999998844999999999984 667778888876 765555443321 111111 0000111111111
Q ss_pred ----eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 320 ----LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 320 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
+.......+.+..+.+++.++++++. +.+.||++++.+|++.+.+++.. |+++++++
T Consensus 286 ~~~~~~~~~~~~~~l~~l~~~ie~gkikp~--i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 286 VNYRWLYFVPSAEYLKALVELIEKGKIKPV--IDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred cceeeeeecCCHHHHHHHHHHHHcCcccCC--cceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 00011113457788999999975554 88999999999999999997776 99998763
No 97
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=2.1e-35 Score=274.85 Aligned_cols=295 Identities=21% Similarity=0.311 Sum_probs=247.5
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCC
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECK 100 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 100 (378)
+++++.+.|.+.+++|+|||+++++|+.|...+.|.. .+|.++|+|++|+|+++|+++..+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 6677888888999999999999999999998876643 34578999999999999999999999999988621
Q ss_pred CCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhh
Q 017052 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180 (378)
Q Consensus 101 ~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~t 180 (378)
.|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 90 --------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~t 125 (323)
T cd05282 90 --------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT 125 (323)
T ss_pred --------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHH
Confidence 148999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
||+++.....+.+|++|||+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|+++++++. ..++...+.++
T Consensus 126 a~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~ 202 (323)
T cd05282 126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSS--PEDLAQRVKEA 202 (323)
T ss_pred HHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEeccc--chhHHHHHHHH
Confidence 9999888888899999999988 8999999999999999 888998999999999999999998876 45677788888
Q ss_pred hCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccc-cccEEEEeeeccCCc-------CCcH
Q 017052 260 TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKP-------KTDL 330 (378)
Q Consensus 260 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~ 330 (378)
+.+ ++|+++||+|+. .....+++++++ |+++.+|..... ...++...+. ++.++.+..+..+.. .+.+
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETF 279 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHH
Confidence 877 899999999984 567889999997 999999876543 2334444444 688888776654321 1246
Q ss_pred HHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 331 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 331 ~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.++++++.++.+.+. +.+.|+++++++|++.+.+++.. |++++
T Consensus 280 ~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 280 AEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 778888989987653 56889999999999999988776 88763
No 98
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=5.2e-35 Score=272.74 Aligned_cols=311 Identities=17% Similarity=0.212 Sum_probs=238.3
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.+ +.+++.+.|.++++||+||+.++++|++|.....+.. .+|.++|||++|+|+++| +.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 799999998864 7888999999999999999999999999986654211 348899999999999964 56799
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+.. .|.. ..|+|+||+.++++.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~ 116 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGVS-------------------HHGGYSEYARVPAEWVVPLPKGL 116 (326)
T ss_pred CCCEEEEcccc-----------------------cCCC-------------------CCCcceeEEEEcHHHeEECCCCC
Confidence 99999876311 0100 13599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhh--cCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAWNV--ADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~--~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++++.+++.+.|||.++... ..+ ..+++|||+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++|++.+
T Consensus 117 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 195 (326)
T cd08289 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEV 195 (326)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEE
Confidence 9999999999999999887533 233 35789999998 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++.+ +. ..+.+.++..+++|++||++|+ ..+...+++++++ |+++.+|.... ...+.....+ .++.++.+...
T Consensus 196 ~~~~--~~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 196 IPRE--EL-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred Ecch--hH-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEe
Confidence 8775 22 3445666644489999999998 6788999999997 99999997643 2223222222 46888877653
Q ss_pred ccCCcCCcHHHHHHHHHcCCCC---CCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFM---VDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.... ......+++.+.. .+. ....+.++|+++++++|++.+.+++.. |+++++
T Consensus 270 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 270 VECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 2210 1122333333332 222 112357899999999999999988877 998864
No 99
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.2e-34 Score=271.38 Aligned_cols=309 Identities=20% Similarity=0.202 Sum_probs=248.6
Q ss_pred eeeEEeecCCCC-----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCc
Q 017052 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 13 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|||+++.+++.+ +++.+.+.|.+.+++|+||+.++++|++|+..+.+.. .+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999998864 6666788888899999999999999999988776643 25678999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||+|+..... ...|+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~---------------------------------------------~~~g~~~~~~~v~~~~~~~ip~ 115 (336)
T cd08252 81 FKVGDEVYYAGDI---------------------------------------------TRPGSNAEYQLVDERIVGHKPK 115 (336)
T ss_pred CCCCCEEEEcCCC---------------------------------------------CCCccceEEEEEchHHeeeCCC
Confidence 9999999865100 0125899999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCC-----CCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~ 237 (378)
++++++++.+++.+.+||+++.+.+.+.+ |++|+|+|+ |++|++++|+|+.+| + +++++++++++.+.++++
T Consensus 116 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~ 194 (336)
T cd08252 116 SLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKEL 194 (336)
T ss_pred CCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc
Confidence 99999999999999999999878888887 999999986 999999999999999 7 899999999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL 316 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i 316 (378)
|++++++.. . ++.+.+.....+++|++||++|++..+..++++++.+ |+++.+|... .. ++...+ .++.++
T Consensus 195 g~~~~~~~~--~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~--~~~~~~~~~~~~~ 266 (336)
T cd08252 195 GADHVINHH--Q-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EP--LDLGPLKSKSASF 266 (336)
T ss_pred CCcEEEeCC--c-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--Cc--ccchhhhcccceE
Confidence 998888765 2 4556666443348999999999767889999999997 9999998653 22 222233 357777
Q ss_pred EEeeeccCC--c-------CCcHHHHHHHHHcCCCCCCcc-eeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 317 KGSLFGGWK--P-------KTDLPSLVNRYLKKEFMVDEF-ITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 317 ~g~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.+..+..+. . ...+.++++++.++.+.+... ....++++++++|++.+.+++.. |++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 267 HWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 665443211 0 123667889999998775311 12457999999999999988876 88764
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.9e-35 Score=270.47 Aligned_cols=308 Identities=25% Similarity=0.349 Sum_probs=245.8
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||++++.+.+.+ +++.+.+.|.+++++|+||++++++|++|+....|.. ..|.++|||++|+|+++|. ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 689999877643 6777777788999999999999999999998877643 3467899999999999995 57999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|++....- | ....|+|++|+.++.+.++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~-------------------~~~~g~~~~~~~~~~~~~~~ip~~~~ 116 (320)
T cd08243 79 GQRVATAMGGM-----------------------G-------------------RTFDGSYAEYTLVPNEQVYAIDSDLS 116 (320)
T ss_pred CCEEEEecCCC-----------------------C-------------------CCCCcccceEEEcCHHHcEeCCCCCC
Confidence 99998762100 0 00125999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++++.+++++.+||+++.+...+++|++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++++++.
T Consensus 117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~- 194 (320)
T cd08243 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID- 194 (320)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-
Confidence 99999999999999999877788999999999998 9999999999999999 79999999999999999999887753
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCee----eccccccccccEEEEeeec
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV----AAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~i~g~~~~ 322 (378)
..++.+.++++ ++++|+++|++|+ ..+...+++++++ |+++.+|........ ......+.++.++.+....
T Consensus 195 --~~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (320)
T cd08243 195 --DGAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSG 269 (320)
T ss_pred --CccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchh
Confidence 33666777777 4489999999997 6788999999997 999999875432111 1111112346666555432
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
... ...+.++++++..+.+++. +.+.++++++++|++.+.+++.. |+++
T Consensus 270 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 270 DVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 211 1347778889989987653 56789999999999999887766 8775
No 101
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.3e-34 Score=265.56 Aligned_cols=298 Identities=25% Similarity=0.389 Sum_probs=240.1
Q ss_pred cCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccccc-ccCC-----CCCcccccceeEEEEEeCCCCCcCCCCCEEEe
Q 017052 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93 (378)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~-----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 93 (378)
+.+. +++.+.+.|+++++||+||+.++++|++|+..+ .|.. .+|.++|+|++|+|+++|+.+..+++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 899999999999999999999999999998876 5542 13678999999999999999999999999987
Q ss_pred ecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhh
Q 017052 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173 (378)
Q Consensus 94 ~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~ 173 (378)
.. .|+|++|+.++.+.++++|+++ ..++.
T Consensus 82 ~~-------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~ 110 (312)
T cd08269 82 LS-------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAF 110 (312)
T ss_pred ec-------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHH
Confidence 61 2489999999999999999998 23332
Q ss_pred hchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHH
Q 017052 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253 (378)
Q Consensus 174 ~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~ 253 (378)
...+++++++++. ..+++++++|||+|+|.+|++++|+|+.+|++.++++.+++++.++++++|++++++.+ ..++.
T Consensus 111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~ 187 (312)
T cd08269 111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIV 187 (312)
T ss_pred hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHH
Confidence 2267889999874 88899999999998899999999999999994399999999999999999998888765 56777
Q ss_pred HHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCC-cCCcH
Q 017052 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWK-PKTDL 330 (378)
Q Consensus 254 ~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~-~~~~~ 330 (378)
+.+.+++.+ ++|+++||+|+.......+++++++ |+++.+|.... ....+.+. ...++.++.++...... ..+.+
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQD-GPRPVPFQTWNWKGIDLINAVERDPRIGLEGM 265 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence 888888776 8999999998767788999999997 99999986542 22222221 12446666555432221 12468
Q ss_pred HHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEE
Q 017052 331 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVI 374 (378)
Q Consensus 331 ~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi 374 (378)
+++++++.++.+.+...+.+.|+++++++|++.+++++. +|+++
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 266 REAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 889999999998764445688999999999999988865 48886
No 102
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3.2e-34 Score=267.11 Aligned_cols=308 Identities=20% Similarity=0.240 Sum_probs=239.8
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||+++.+.+.| +++++.|.|.+++++|+||++++++|++|+..+.|.. ..|..+|||++|+|++ .++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888888875 7889999999999999999999999999998887753 3478899999999998 45678999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|+...... |.. ..|+|++|+.++.+.++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~~~-------------------~~g~~~~~~~~~~~~~~~iP~~~~ 116 (323)
T TIGR02823 79 GDEVIVTGYGL-----------------------GVS-------------------HDGGYSQYARVPADWLVPLPEGLS 116 (323)
T ss_pred CCEEEEccCCC-----------------------CCC-------------------CCccceEEEEEchhheEECCCCCC
Confidence 99998763110 000 125999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHh--hcCCCCCC-eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 168 LEKICLLSCGLSAGLGAAWN--VADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~--~~~~~~g~-~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++.+++.+.+||.++.. .+++.+|+ +|||+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.++
T Consensus 117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 195 (323)
T TIGR02823 117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVI 195 (323)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEE
Confidence 99999999999999988643 34488898 9999998 9999999999999999 788888888888999999998888
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeec
Q 017052 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 322 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 322 (378)
+.. +.+. .++.+..+++|+++||+|+ ..+...+++++++ |+++.+|.... ....+....+ .++.++.+....
T Consensus 196 ~~~--~~~~--~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 196 DRE--DLSP--PGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred ccc--cHHH--HHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecc
Confidence 764 2222 4445544479999999997 4788899999997 99999997643 2222222222 567888776543
Q ss_pred cCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 323 GWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 323 ~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.... ...+..+.+++..+.+.. . .+.|+++++++|++.+.+++.. |+++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 269 YCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred ccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 2110 012445556666776543 2 4689999999999999988877 998863
No 103
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1e-34 Score=273.43 Aligned_cols=308 Identities=25% Similarity=0.296 Sum_probs=238.8
Q ss_pred eeeEEeecCCCC---eEEEEeecCCC-CCCcEEEEEeEEecCcccccccccC------------------CCCCcccccc
Q 017052 13 CKAAVAWGAGQP---LVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQ------------------AIFPRIFGHE 70 (378)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~------------------~~~p~~~G~e 70 (378)
|||++++++++| +++.+.++|.| +++||+|||+++++|++|+..+.|. ..+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999998876 88899999998 4999999999999999999887663 1457799999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceee
Q 017052 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (378)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (378)
++|+|+++|+++.+|++||+|+..+.. +..|+|++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~~~ 115 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP---------------------------------------------WSQGTHAE 115 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC---------------------------------------------CCCcccee
Confidence 999999999999999999999876311 01259999
Q ss_pred EEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCC----CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK----GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 151 ~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~----g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
|+.++.+.++++|+++++++++.+++.+.+||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +++++.
T Consensus 116 ~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~ 194 (350)
T cd08248 116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTC 194 (350)
T ss_pred EEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence 9999999999999999999999999999999999877777654 999999997 9999999999999999 788776
Q ss_pred CChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe--e
Q 017052 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--V 303 (378)
Q Consensus 226 ~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~ 303 (378)
++ ++.+.++++|.+.+++.. ..++.+.+... +++|++||++|+. ....++++++++ |+++.+|....... .
T Consensus 195 ~~-~~~~~~~~~g~~~~~~~~--~~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 267 (350)
T cd08248 195 ST-DAIPLVKSLGADDVIDYN--NEDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDKL 267 (350)
T ss_pred Cc-chHHHHHHhCCceEEECC--ChhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccccccc
Confidence 54 678888999998888765 34455544432 3799999999985 788999999997 99999986532111 1
Q ss_pred ecc--c----ccccc-ccE-E-EEe---eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-
Q 017052 304 AAH--Y----GLFLS-GRT-L-KGS---LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL- 370 (378)
Q Consensus 304 ~~~--~----~~~~~-~~~-i-~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~- 370 (378)
.+. + ..+.. ... + ... +.........+.++++++.++.+.+. +.+.|+++++++|++.+.+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 345 (350)
T cd08248 268 GLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARG 345 (350)
T ss_pred cccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecc--cceeecHHHHHHHHHHHhcCCCce
Confidence 110 0 00000 000 0 000 00001112458889999999987543 56889999999999999887765
Q ss_pred EEEEe
Q 017052 371 RSVIH 375 (378)
Q Consensus 371 kvvi~ 375 (378)
|++++
T Consensus 346 ~vv~~ 350 (350)
T cd08248 346 KTVIK 350 (350)
T ss_pred EEEeC
Confidence 88763
No 104
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=248.53 Aligned_cols=296 Identities=20% Similarity=0.221 Sum_probs=240.7
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccC--CCCCcccccceeEEEEEeC--CCCCcCCCCCEEEeecccCCC
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRIFGHEASGIVESVG--PGVTEFNEGEHVLTVFIGECK 100 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~~ 100 (378)
+++++.++|+|+++|||||..|.++++.-...+... +-.|+-+|...+|.++... ++...|++||.|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~------ 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV------ 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec------
Confidence 999999999999999999999999998433222221 1457777766655544432 567889999999876
Q ss_pred CCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh--hhhchhh
Q 017052 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI--CLLSCGL 178 (378)
Q Consensus 101 ~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a--a~~~~~~ 178 (378)
.+|+||..++.+.+.|++.+.-+..+ ..+..+.
T Consensus 101 ---------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG 135 (340)
T COG2130 101 ---------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPG 135 (340)
T ss_pred ---------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCch
Confidence 28999999999999999866433332 3466688
Q ss_pred hhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHH
Q 017052 179 SAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVI 256 (378)
Q Consensus 179 ~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i 256 (378)
.|||.+|.+....++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|..++++ +|.+..+||+ .+++.+.+
T Consensus 136 ~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~~~~L 212 (340)
T COG2130 136 LTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDFAQAL 212 (340)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccHHHHH
Confidence 999999999999999999999988 9999999999999999 99999999999999998 9999999998 67999999
Q ss_pred HHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe--eecccc----ccccccEEEEeeecc-CCc--C
Q 017052 257 KRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYG----LFLSGRTLKGSLFGG-WKP--K 327 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~----~~~~~~~i~g~~~~~-~~~--~ 327 (378)
++.++.++|+.||++|+ ..+...+..|+.. +|++.+|..+.... .+..+. .+.+.+++.|+.... +.. .
T Consensus 213 ~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~ 290 (340)
T COG2130 213 KEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFP 290 (340)
T ss_pred HHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhH
Confidence 99999999999999999 7999999999996 99999997654322 222222 223477888988732 222 2
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
+..+++.+|+.+|+|+.+. +-+-.++.+++||..|-+++.. |.|+++.+
T Consensus 291 e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 291 EALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 4567899999999999884 3445799999999999999887 99999864
No 105
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=7e-34 Score=265.47 Aligned_cols=302 Identities=19% Similarity=0.202 Sum_probs=240.3
Q ss_pred eeeEEeecCCC------CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--C----CCcccccceeEEEEEeCC
Q 017052 13 CKAAVAWGAGQ------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--I----FPRIFGHEASGIVESVGP 80 (378)
Q Consensus 13 ~~a~~~~~~~~------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~----~p~~~G~e~~G~V~~vG~ 80 (378)
.|||++.+.++ .+++++.+.|++.+++|+||+.++++|+.|.....+.. . .+.++|+|++|+|+++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777766552 28899999999999999999999999997765444421 1 245789999999999996
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC-Cce
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 159 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~ 159 (378)
. +|++||+|+.. ++|++|+.++. +.+
T Consensus 82 ~--~~~~Gd~V~~~---------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 82 P--DFKVGDLVSGF---------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred C--CCCCCCEEecc---------------------------------------------------cceEEEEEecchhhc
Confidence 4 79999999865 37999999999 999
Q ss_pred eeCCCCCC--hhhhhh-hchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 160 VKVSSIAP--LEKICL-LSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 160 ~~iP~~l~--~~~aa~-~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
+++|++++ +++++. +++++.|||+++.+...+.++++|||+|+ |.+|++++|+|+.+|+ +++++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999995 555555 88899999999877788999999999986 9999999999999999 8999999999999998
Q ss_pred h-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeee----c-cccc
Q 017052 236 A-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA----A-HYGL 309 (378)
Q Consensus 236 ~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~ 309 (378)
+ +|++++++++ +.++.+.+.+++.+++|++|||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~--~~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYK--TPDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecC--ChhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 9998888876 4567777777765589999999997 6788999999997 9999998654322111 1 2223
Q ss_pred cccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 310 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 310 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
+.++.++.+..+..... .+.+.++++++.++.+++.. ...+++++++++++.+.+++.. |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 35577777765432211 13467788999999887653 3568999999999999887765 7763
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2e-33 Score=260.71 Aligned_cols=306 Identities=25% Similarity=0.343 Sum_probs=250.0
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.+ +++.+.+.|.+.+++++||+.++++|+.|+....|.. .+|.++|||++|+|+++|+.+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999986654 7788888888899999999999999999998876643 3467899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+.... .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (323)
T cd05276 81 VGDRVCALLA------------------------------------------------GGGYAEYVVVPAGQLLPVPEGL 112 (323)
T ss_pred CCCEEEEecC------------------------------------------------CCceeEEEEcCHHHhccCCCCC
Confidence 9999987610 1489999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.++..+.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +++++++++++.+.++++|.+.+++.
T Consensus 113 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd05276 113 SLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINY 191 (323)
T ss_pred CHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877788999999999997 9999999999999999 79999999999999999998888776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
. ..++.+.+.+...+ ++|+++|++|+. .....+.++.++ |+++.+|...... .......+ .++.++.++....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 192 R--TEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred C--chhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeeccc
Confidence 5 45677777777766 899999999974 577889999996 9999998654321 22222222 4678887776543
Q ss_pred CCc--C-----CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 324 WKP--K-----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 324 ~~~--~-----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
... + ..+.++++++.++.+.+. ..+.|+++++++|++.+.+++.. |+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 267 RSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred hhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 211 0 124567788888887543 56889999999999999887765 7763
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.1e-33 Score=260.98 Aligned_cols=313 Identities=22% Similarity=0.324 Sum_probs=250.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
||++++...+.+ +++.+.+.|.+.+++++|++.++++|++|+....|.. ..|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888876644 8888899999999999999999999999998876643 4567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... ..+ ..|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~v~~~~~~----------------------------~~~---------------~~g~~~~~~~~~~~~~~~ip~~~ 117 (325)
T cd08253 81 VGDRVWLTNLG----------------------------WGR---------------RQGTAAEYVVVPADQLVPLPDGV 117 (325)
T ss_pred CCCEEEEeccc----------------------------cCC---------------CCcceeeEEEecHHHcEeCCCCC
Confidence 99999887311 000 12589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++++.+||+++.+...+.+|++|+|+|+ |.+|++++++++..|+ +++++++++++.+.++++|++.+++.
T Consensus 118 ~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (325)
T cd08253 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY 196 (325)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877789999999999987 9999999999999999 89999999999999999999888876
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
. ..++.+.+.++..+ ++|+++|++++ ......+++++.+ |+++.++.......+.+.. .+.++.++.+......
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 197 R--AEDLADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRGTIPINP-LMAKEASIRGVLLYTA 271 (325)
T ss_pred C--CcCHHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcCCCChhH-HHhcCceEEeeehhhc
Confidence 5 45677777777666 89999999988 4677888999997 9999998754222222222 1344666665543221
Q ss_pred Cc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.. .+.+..+.+++..+.+++. ..+.|++++++++++.+.++... |+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 272 TPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 11 1224456667777776543 56889999999999999987776 988763
No 108
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-33 Score=262.08 Aligned_cols=308 Identities=23% Similarity=0.275 Sum_probs=249.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+++.+ +++++.+.|.+.+++|+|++.++++|++|+....+.. ..|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 799999988865 7788888888999999999999999999998876643 2367899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... + . ...|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~-------------------------~--~----------------~~~g~~~~~~~v~~~~~~~~p~~~ 117 (326)
T cd08272 81 VGDEVYGCAGG-------------------------L--G----------------GLQGSLAEYAVVDARLLALKPANL 117 (326)
T ss_pred CCCEEEEccCC-------------------------c--C----------------CCCCceeEEEEecHHHcccCCCCC
Confidence 99999876210 0 0 012589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.++..+.+||+++.+...+++|++++|+|+ |.+|++++++|+.+|+ ++++++++ ++.+.++++|.+.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 195 (326)
T cd08272 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYY 195 (326)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEec
Confidence 999999999999999999888899999999999986 9999999999999999 88888888 88899999999888776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeecc-
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG- 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 323 (378)
. .. +...+.+++.+ ++|+++|++++ ......+.+++++ |+++.++... .. .+.... .+++++.+..+..
T Consensus 196 ~--~~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~~--~~~~~~-~~~~~~~~~~~~~~ 266 (326)
T cd08272 196 R--ET-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA-TH--DLAPLS-FRNATYSGVFTLLP 266 (326)
T ss_pred c--hh-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC-cc--chhhHh-hhcceEEEEEcccc
Confidence 5 34 77778888777 89999999998 5678899999996 9999998663 11 222222 3566666554321
Q ss_pred ----CC---cCCcHHHHHHHHHcCCCCCCccee-eeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 ----WK---PKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ----~~---~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.. ..+.+.++++++.++.+... ++ +.|++++++++++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 267 LLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 00 01346678888888886543 34 789999999999999887766 998864
No 109
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3e-33 Score=260.66 Aligned_cols=309 Identities=16% Similarity=0.196 Sum_probs=241.6
Q ss_pred eeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.++|. .+++++.+.|.|+++||+||+.++++|++|.....|.. .+|.++|||++|+|++ +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 79999999885 38899999999999999999999999999998876643 3477899999999998 6677899
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|++..... | ....|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~~-----------------------~-------------------~~~~g~~~~~~~v~~~~~~~lp~~~ 116 (324)
T cd08288 79 PGDRVVLTGWGV-----------------------G-------------------ERHWGGYAQRARVKADWLVPLPEGL 116 (324)
T ss_pred CCCEEEECCccC-----------------------C-------------------CCCCCcceeEEEEchHHeeeCCCCC
Confidence 999998752100 0 0013589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHH--hhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAW--NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~--~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++++.++..+++++.++. +..+.. ++++|||+|+ |.+|++++|+|+.+|+ ++++++.++++.+.++++|++++
T Consensus 117 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 195 (324)
T cd08288 117 SARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEI 195 (324)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEE
Confidence 99999999999999987753 234455 6789999998 9999999999999999 79998899999999999999998
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++++ + ....++.+..+++|.++|++++ ..+...+..++.+ |+++.+|.... .........+ .++.++.+...
T Consensus 196 ~~~~--~--~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 196 IDRA--E--LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred EEcc--h--hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEe
Confidence 8775 2 2224555555578999999997 4667888888886 99999987532 1122222333 56888887653
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..... .+.+..+.+++..+.+.+ +.+.++++++++|++.+++++.. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 269 VMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 32111 123555667777777643 35889999999999999988877 998864
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.9e-33 Score=258.44 Aligned_cols=307 Identities=25% Similarity=0.302 Sum_probs=249.4
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
||+....++.+ +.+.+.+.+.+++++++|+|.++++|++|+....+.. .+|.++|||++|+|+.+|+++.+|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGD 80 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCC
Confidence 46777666654 6677777777899999999999999999998877654 3566899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~ 112 (320)
T cd05286 81 RVAYAG------------------------------------------------PPGAYAEYRVVPASRLVKLPDGISDE 112 (320)
T ss_pred EEEEec------------------------------------------------CCCceeEEEEecHHHceeCCCCCCHH
Confidence 998761 01489999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.++....++|+++.+..++++|++|||+|+ |.+|++++++|+.+|+ .++++++++++.+.++++|++.+++..
T Consensus 113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~-- 189 (320)
T cd05286 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR-- 189 (320)
T ss_pred HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--
Confidence 999999999999999888889999999999997 9999999999999999 899999999999999999998888765
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCc
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKP 326 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~ 326 (378)
..++.+.+..++.+ ++|+++||+++ .....++++++++ |+++.+|..... ...++...+ .+++++.+........
T Consensus 190 ~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (320)
T cd05286 190 DEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIA 266 (320)
T ss_pred chhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcC
Confidence 45677778887766 89999999998 5788999999997 999999875432 222233322 4566665443322111
Q ss_pred -----CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 327 -----KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 327 -----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+.++++++.++.+.+. +.+.|+++++++|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 267 TREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred CHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1224567888888887654 56789999999999999988776 888753
No 111
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=4.5e-33 Score=262.50 Aligned_cols=313 Identities=18% Similarity=0.255 Sum_probs=235.1
Q ss_pred eeeEEeecCCCCeEEEEeecCCC---CCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC-c
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT-E 84 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~-~ 84 (378)
.|+++++++++++++++++.|.| ++++|+||+.++++|++|+..+.+.. ..|.++|+|++|+|+++|+++. .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 37899999998888888777765 89999999999999999988765432 1377899999999999999998 8
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC----cee
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG----CAV 160 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~ 160 (378)
|++||+|++.....|. ..|+|++|++++.. .++
T Consensus 81 ~~~Gd~V~~~~~~~~~-------------------------------------------~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 81 WKVGDEVCGIYPHPYG-------------------------------------------GQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCCEEEEeecCCCC-------------------------------------------CCceeeEEEEEccccccceeE
Confidence 9999999876322110 12599999999987 799
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhc-CCCCCCeEEEEcc-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~-~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~ 237 (378)
++|+++++++++.++..+.|||+++.+.. .+++|++|+|+|+ |.+|++++|+|+.+|. +.++++. ++++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999986666 7999999999988 8999999999998754 3566665 45556677889
Q ss_pred CCcEEeCCCCCCch---HHHHH-HHHhCC-CccEEEeccCChHHHHHHHHHhc---cCCccEEEeccCCCCC--ee----
Q 017052 238 GVTEFLNPNDNNEP---VQQVI-KRITDG-GADYSFECIGDTGMITTALQSCC---DGWGLAVTLGVPKLKP--EV---- 303 (378)
Q Consensus 238 g~~~vi~~~~~~~~---~~~~i-~~~~~~-~~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~--~~---- 303 (378)
|++++++.++ .+ +...+ +..+++ ++|++|||+|+......++++++ ++ |+++.++...... ..
T Consensus 197 g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~ 273 (352)
T cd08247 197 GADHFIDYDA--HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNS 273 (352)
T ss_pred CCCEEEecCC--CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhh
Confidence 9999888752 23 33344 444424 89999999998667788899999 97 9999874222110 00
Q ss_pred ----ecccccccccc-----EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEE
Q 017052 304 ----AAHYGLFLSGR-----TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSV 373 (378)
Q Consensus 304 ----~~~~~~~~~~~-----~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvv 373 (378)
.+....+.++. .+..... ... .+.+.++++++.++.+++. +.+.++++++++|++.+++++.. |++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv 349 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLL-DPN-ADWIEKCAELIADGKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVV 349 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEe-cCC-HHHHHHHHHHHhCCCeEee--eccEecHHHHHHHHHHHHcCCCCCcEE
Confidence 01111111222 2211111 110 1346778889989886543 56889999999999999988776 998
Q ss_pred EeC
Q 017052 374 IHM 376 (378)
Q Consensus 374 i~~ 376 (378)
+++
T Consensus 350 i~~ 352 (352)
T cd08247 350 IKV 352 (352)
T ss_pred EeC
Confidence 864
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.3e-33 Score=257.10 Aligned_cols=307 Identities=24% Similarity=0.303 Sum_probs=244.6
Q ss_pred eeeEEeecCC--CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|||+++.+++ ..+++.+.+.|++.+++++||+.++++|++|+....+.. .+|.++|||++|+|+.+|+.+..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999999 359999999999999999999999999999988776643 23678999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|....... ..|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~---------------------------------------------~~~~~~s~~~~~~~~~~~ip~~~~ 115 (325)
T cd08271 81 GDRVAYHASLA---------------------------------------------RGGSFAEYTVVDARAVLPLPDSLS 115 (325)
T ss_pred CCEEEeccCCC---------------------------------------------CCccceeEEEeCHHHeEECCCCCC
Confidence 99998762100 125899999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+.+++.+.+.+.+||+++.+...+++|++|+|+|+ |.+|++++++|+..|+ .++++. ++++.+.++.+|++.+++..
T Consensus 116 ~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~ 193 (325)
T cd08271 116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN 193 (325)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC
Confidence 99999999999999999888888999999999998 8899999999999999 777776 67788888889998888765
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee----
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF---- 321 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~---- 321 (378)
..++.+.++++..+ ++|++++++++. .....+++++++ |+++.++...... .. ..+..+..+....+
T Consensus 194 --~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~ 265 (325)
T cd08271 194 --DEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDAS--PD--PPFTRALSVHEVALGAAH 265 (325)
T ss_pred --CccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCc--ch--hHHhhcceEEEEEecccc
Confidence 45677778877766 899999999984 456789999997 9999987543321 11 11112233222211
Q ss_pred -ccC-----CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 -GGW-----KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 -~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
... ...+.+.++++++.++.+.+. ..+.|+++++.+|++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 266 DHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 110 001234668888888887543 45789999999999999987776 988864
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.7e-33 Score=258.22 Aligned_cols=302 Identities=21% Similarity=0.276 Sum_probs=237.7
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||+++...+.+ +++++.+.|.|.+++++||+.++++|++|..++.|.. .+|.++|||++|+|+++|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78999988765 8888889999999999999999999999998877653 34668999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|++... .|+|++|+.++.+.++++|++++
T Consensus 82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~ 113 (331)
T cd08273 82 GDRVAALTR------------------------------------------------VGGNAEYINLDAKYLVPVPEGVD 113 (331)
T ss_pred CCEEEEeCC------------------------------------------------CcceeeEEEechHHeEECCCCCC
Confidence 999988621 14899999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++++.+++.+.+||+++.+...+.+|++|+|+|+ |.+|++++++|+.+|+ +++++.. +++.+.++++|+.. ++..
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence 99999999999999999877788999999999997 9999999999999999 8888877 88899999999754 3433
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc--c-------------cccc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH--Y-------------GLFL 311 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~-------------~~~~ 311 (378)
..++... ....+++|+++|++|+. .+..++++++.+ |+++.+|.........+. + ..+.
T Consensus 191 --~~~~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (331)
T cd08273 191 --TKDWLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTG 264 (331)
T ss_pred --Ccchhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceecc
Confidence 2233333 23334899999999985 488899999997 999999876543221111 1 1111
Q ss_pred cccEEEEeeeccC-C---cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 312 SGRTLKGSLFGGW-K---PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 312 ~~~~i~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
...++........ . ..+.+.++++++.++.+... +.+.++++++++|++.+.+++.. |+|+
T Consensus 265 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 265 RRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 1223322221100 0 12357788899999987643 56889999999999999887776 7775
No 114
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.1e-32 Score=251.61 Aligned_cols=312 Identities=24% Similarity=0.354 Sum_probs=248.9
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.+ +++.+.+.|.+.+++++|+|.++++|+.|+....+.. .+|.++|||++|+|+.+|+.+..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688999876643 7777888888999999999999999999998876643 2367899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+.++...+ ...|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~ 117 (328)
T cd08268 81 VGDRVSVIPAADL-------------------------------------------GQYGTYAEYALVPAAAVVKLPDGL 117 (328)
T ss_pred CCCEEEecccccc-------------------------------------------CCCccceEEEEechHhcEeCCCCC
Confidence 9999988632110 012589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ +++.++++.++.+.++++|.+.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (328)
T cd08268 118 SFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVT 196 (328)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEec
Confidence 999999999999999999878888999999999998 9999999999999999 89999899999999988998888776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 323 (378)
+ ...+.+.+.+...+ ++|++++++++ .....++.+++++ |+++.+|..... ...+... .+.++.++.+..+..
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T cd08268 197 D--EEDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLDE 271 (328)
T ss_pred C--CccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEeccc
Confidence 5 45677777777766 89999999998 6778889999997 999999865432 1222222 345677777665432
Q ss_pred CC-cCCc----HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 324 WK-PKTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 324 ~~-~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.. .... +..+.+++..+.+... ....|++++++++++.+.+++.. |++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 272 ITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 11 0112 3344455666765543 45789999999999999887776 88875
No 115
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=1.1e-32 Score=249.78 Aligned_cols=265 Identities=31% Similarity=0.468 Sum_probs=217.9
Q ss_pred cEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcc
Q 017052 39 EIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE 114 (378)
Q Consensus 39 evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 114 (378)
||+|+|.++++|+.|+..+.|.. .+|.++|+|++|+|+++|+.+..|++||+|+..+..+|+.|..|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 68999999999999998887753 3478899999999999999999999999999999999999999997 565
Q ss_pred cccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCC
Q 017052 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG 194 (378)
Q Consensus 115 ~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g 194 (378)
...... ....|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....++++
T Consensus 77 ~~~~~~---------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~ 135 (271)
T cd05188 77 GGGILG---------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPG 135 (271)
T ss_pred CCCEec---------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCC
Confidence 554321 11236999999999999999999999999999999999999998777777999
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 273 (378)
++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|.+.+++.. ..++.+.+. ...+ ++|+++|++++
T Consensus 136 ~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 136 DTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH-HhcCCCCCEEEECCCC
Confidence 999999985599999999999998 899999999999999999988888775 445555555 4444 89999999998
Q ss_pred hHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHHHHHHH
Q 017052 274 TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336 (378)
Q Consensus 274 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 336 (378)
......++++++++ |+++.++..............+.+++++.++....+ .++++++++
T Consensus 212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 56788899999997 999999877654333323334456888888775432 345666554
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=8.8e-32 Score=250.20 Aligned_cols=308 Identities=24% Similarity=0.331 Sum_probs=250.1
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+.+.+++.+ +++.+.+.|.+++++++||+.++++|+.|+....+.. .+|.++|||++|+|+.+|+.+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 688888877665 6666777677899999999999999999988876643 2357899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+... . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~-------------------------------~-----------------~~~~~~~~~~~~~~~~~ip~~~ 112 (325)
T TIGR02824 81 VGDRVCALV-------------------------------A-----------------GGGYAEYVAVPAGQVLPVPEGL 112 (325)
T ss_pred CCCEEEEcc-------------------------------C-----------------CCcceeEEEecHHHcEeCCCCC
Confidence 999998751 0 1489999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++.+++.++..+.++|+++.+...++++++|+|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++.+|.+.+++.
T Consensus 113 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
T TIGR02824 113 SLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY 191 (325)
T ss_pred CHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999999878889999999999997 9999999999999999 89999899999999999998877766
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
. ..++...+.....+ ++|+++|++|+ ......+.+++++ |+++.+|....... .+....+ .++.++.+.....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T TIGR02824 192 R--EEDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRA 266 (325)
T ss_pred C--chhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhh
Confidence 5 45677777777766 89999999997 5778899999997 99999987542211 3333332 5688888776543
Q ss_pred CCc-------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKP-------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
... ...+.++++++.++.+.+. +.+.+++++++++++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 267 RPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred cchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 111 1123557778888876543 56789999999999999887766 888763
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=4.9e-32 Score=249.50 Aligned_cols=289 Identities=25% Similarity=0.377 Sum_probs=232.8
Q ss_pred cCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCccccc
Q 017052 32 VNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKS 107 (378)
Q Consensus 32 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 107 (378)
.|++.+++++||+.++++|+.|+....+.+ .+|.++|+|++|+|+++|+.+.+|++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 477889999999999999999998877653 347789999999999999999999999999876210
Q ss_pred CCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHh
Q 017052 108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187 (378)
Q Consensus 108 ~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~ 187 (378)
..|+|++|+.++.+.++++|+++++++++.++..+.+||+++ +
T Consensus 72 ------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~ 114 (303)
T cd08251 72 ------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-A 114 (303)
T ss_pred ------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-H
Confidence 125899999999999999999999999999999999999997 5
Q ss_pred hcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-Ccc
Q 017052 188 VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 265 (378)
Q Consensus 188 ~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d 265 (378)
...+++|++|+|+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++++|++.+++.. ..++.+.+.+++++ ++|
T Consensus 115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLTGGRGVD 191 (303)
T ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHcCCCCce
Confidence 788999999999976 9999999999999999 899999999999999999999888776 55677788888776 899
Q ss_pred EEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC---Cc---CCcHHHHHHHHHc
Q 017052 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW---KP---KTDLPSLVNRYLK 339 (378)
Q Consensus 266 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~---~~~~~~~~~~~~~ 339 (378)
+++|++++ ......+++++++ |+++.+|.........+....+.++..+....+... .. .+.+.++++++.+
T Consensus 192 ~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
T cd08251 192 VVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEE 269 (303)
T ss_pred EEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHC
Confidence 99999976 6778899999997 999999865432222222222233443333222111 00 1236678888888
Q ss_pred CCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 340 KEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 340 ~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
+.++.. ..+.|++++++++++.+.+++.. |+++
T Consensus 270 g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 270 GELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 887643 56889999999999999988766 7764
No 118
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.6e-31 Score=244.78 Aligned_cols=307 Identities=21% Similarity=0.327 Sum_probs=241.5
Q ss_pred eeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 14 KAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 14 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||+.+...+. .+.+++.+.|.+++++++||+.++++|++|...+.|.. ..|.++|||++|+|+.+|+.+.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666666554 37777888888999999999999999999998877653 23668999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|+.... .|+|++|+.++.+.++++|++++
T Consensus 81 G~~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~~ 112 (337)
T cd08275 81 GDRVMGLTR------------------------------------------------FGGYAEVVNVPADQVFPLPDGMS 112 (337)
T ss_pred CCEEEEecC------------------------------------------------CCeeeeEEEecHHHeEECCCCCC
Confidence 999987621 14899999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++.+++.+.++|+++.+...+++|++|+|+|+ |.+|++++++|+.+ +. .++.. .++++.+.++.+|++.+++.
T Consensus 113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY 190 (337)
T ss_pred HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence 99999999999999999888889999999999998 99999999999998 33 33322 34567888888999888876
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC--eeec-------------c-ccc
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EVAA-------------H-YGL 309 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~~~-------------~-~~~ 309 (378)
. ..++.+.++..+.+++|+++|++|+ ......+++++++ |+++.+|...... .... . ...
T Consensus 191 ~--~~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd08275 191 R--TQDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL 266 (337)
T ss_pred C--CCcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHH
Confidence 5 4567777877775589999999997 4678899999997 9999998654321 1110 0 122
Q ss_pred cccccEEEEeeeccCCc-C----CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 310 FLSGRTLKGSLFGGWKP-K----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 310 ~~~~~~i~g~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.++.++.+..+..... . ..+.++++++.++.+.+. ..+.|++++++++++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred hhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 34577777765432111 1 125678888888886544 56889999999999999988776 998864
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=1.7e-31 Score=246.58 Aligned_cols=298 Identities=23% Similarity=0.334 Sum_probs=238.0
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|||+++..++.. +++.+.+.|.+++++|+||+.++++|+.|+..+.|.. .+|..+|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789999887754 5667777788999999999999999999998876642 34788999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+++||+|+.....+ ..|+|++|+.++.+.++++|+
T Consensus 81 ~~~G~~V~~~~~~~---------------------------------------------~~g~~~~~~~~~~~~~~~~p~ 115 (309)
T cd05289 81 FKVGDEVFGMTPFT---------------------------------------------RGGAYAEYVVVPADELALKPA 115 (309)
T ss_pred CCCCCEEEEccCCC---------------------------------------------CCCcceeEEEecHHHhccCCC
Confidence 99999998762110 025899999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++++++.+++.+.++|+++.+...+.+|++|+|+|+ |.+|++++++|+..|+ +++++..++ +.+.++++|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~ 193 (309)
T cd05289 116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVI 193 (309)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEE
Confidence 99999999999999999999877777999999999997 9999999999999999 788887777 88888899988877
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
+.. ..++.+ ...+ ++|+++|++|+. ....++.+++++ |+++.+|....... ..+.++.++....+.
T Consensus 194 ~~~--~~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~ 260 (309)
T cd05289 194 DYT--KGDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE 260 (309)
T ss_pred eCC--CCchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEec
Confidence 665 223332 2333 799999999984 778899999997 99999987543211 222345555444332
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.. ...+.++++++.++.++. ++.+.|+++++++|++.+.+++.. |+++
T Consensus 261 ~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 261 PD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 11 346888899998888653 367889999999999999887765 7663
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=5.8e-31 Score=244.34 Aligned_cols=306 Identities=26% Similarity=0.418 Sum_probs=247.2
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCC-CCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
|+|+++...+.+ +++.+.+ |.+. +++++|++.++++|++|+..+.|.. ..|..+|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688998765543 7777776 6666 4999999999999999998876653 236689999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|+.+.. .|++++|+.++.+.++++|++
T Consensus 80 ~~G~~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 80 KVGDRVVALTG------------------------------------------------QGGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred CCCCEEEEecC------------------------------------------------CceeEEEEEcCHHHceeCCCC
Confidence 99999998720 148999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++..+++.+...+.+||+++.+...++++++|+|+|+ |.+|++++++|+..|+ .+++++.++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence 9999999899999999999877888999999999998 9999999999999999 7999999999999999999888777
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~ 322 (378)
.. ..++.+.+...+.+ ++|+++|++|+ .....++++++++ |+++.+|....... .+.. ..+.++.++.+..+.
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd08241 191 YR--DPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWG 265 (323)
T ss_pred cC--CccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecc
Confidence 65 45677778887776 89999999997 6778899999997 99999987543211 1112 223457777776543
Q ss_pred cCCc------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKP------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.+.. .+.+.++++++.++.+... +...|+++++.++++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 266 AYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 3211 1345678888888886543 56889999999999998887765 88763
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.7e-31 Score=243.94 Aligned_cols=292 Identities=26% Similarity=0.312 Sum_probs=224.8
Q ss_pred EEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCC
Q 017052 26 VVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99 (378)
Q Consensus 26 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (378)
++.+.+.|.+++++|+|+++++++|++|+..+.|.. ..|..+|||++|+|+++|+++.++++||+|+.....+
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 777888899999999999999999999998877643 2467899999999999999999999999998763110
Q ss_pred CCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhh
Q 017052 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179 (378)
Q Consensus 100 ~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ 179 (378)
..|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 94 --------------------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 129 (319)
T cd08267 94 --------------------------------------------GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL 129 (319)
T ss_pred --------------------------------------------CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHH
Confidence 125899999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
+||+++.+...+++|++|+|+|+ |.+|++++++|+.+|+ +++++.++ ++.+.++++|.+.+++.. ..++. ..
T Consensus 130 ~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~~~~---~~ 202 (319)
T cd08267 130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYT--TEDFV---AL 202 (319)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCC--CCCcc---hh
Confidence 99999877777999999999998 9999999999999999 88888765 888888999998888765 22332 33
Q ss_pred HhCC-CccEEEeccCCh-HHHHHHHHHhccCCccEEEeccCCCCCeeec---cccccccccEEEEeeeccCCcCCcHHHH
Q 017052 259 ITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAA---HYGLFLSGRTLKGSLFGGWKPKTDLPSL 333 (378)
Q Consensus 259 ~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 333 (378)
.+.+ ++|+++||+|+. ......+..++++ |+++.+|.......... ..........+...... .. .+.+.++
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 279 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK-PN-AEDLEQL 279 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec-CC-HHHHHHH
Confidence 4444 899999999852 2233334448886 99999987654222221 11111112222222211 11 3568889
Q ss_pred HHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 334 VNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 334 ~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++++.++.+.. .+.+.|+++++++|++.+.+++.. |+++
T Consensus 280 ~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 280 AELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 99999888654 367889999999999999887665 7663
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=1.5e-30 Score=237.87 Aligned_cols=281 Identities=22% Similarity=0.281 Sum_probs=228.5
Q ss_pred CcEEEEEeEEecCcccccccccCC-CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccc
Q 017052 38 EEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL 116 (378)
Q Consensus 38 ~evlV~v~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~ 116 (378)
+|++||+.++++|++|+....|.. .+|.++|+|++|+|+++|+.+..|++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---------------------
Confidence 589999999999999999887753 3588999999999999999999999999998761
Q ss_pred cccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCe
Q 017052 117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 196 (378)
Q Consensus 117 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~ 196 (378)
.|+|+||+.++.+.++++|+++++++++.+++++.++|.++.+...+++|++
T Consensus 60 ----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~ 111 (293)
T cd05195 60 ----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGES 111 (293)
T ss_pred ----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCE
Confidence 1489999999999999999999999999999999999999878889999999
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC--CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccC
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g--~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 272 (378)
|+|+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++.++ ++.+++.. ..++.+.+.+++.+ ++|+++|++|
T Consensus 112 vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 112 VLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHhCCCCceEEEeCCC
Confidence 999976 9999999999999999 8999999999999998888 67777665 55677788888776 8999999999
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC---c---CCcHHHHHHHHHcCCCCCCc
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK---P---KTDLPSLVNRYLKKEFMVDE 346 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~ 346 (378)
+. .+..++++++++ |+++.+|.........+....+.++.++....+.... . .+.+.++++++.++.+.+
T Consensus 189 ~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (293)
T cd05195 189 GE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKP-- 264 (293)
T ss_pred ch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCccc--
Confidence 85 788999999997 9999998765321112222223345555544332211 0 123567888888888653
Q ss_pred ceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 347 FITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 347 ~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.....+++++++++++.+.+++.. |+++
T Consensus 265 ~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 265 LPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred CCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 355778999999999999988766 7763
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.98 E-value=1.9e-30 Score=236.86 Aligned_cols=277 Identities=20% Similarity=0.323 Sum_probs=225.4
Q ss_pred EEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCccccccccc
Q 017052 42 IKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121 (378)
Q Consensus 42 V~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~ 121 (378)
||+.++++|++|++...|.+..|.++|+|++|+|+++|+.+..|++||+|+..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------------
Confidence 89999999999999888865557899999999999999999999999999876
Q ss_pred ccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEc
Q 017052 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 201 (378)
Q Consensus 122 g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~G 201 (378)
. .|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.+...+.+|++|+|+|
T Consensus 55 ----~------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g 112 (288)
T smart00829 55 ----A------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHA 112 (288)
T ss_pred ----c------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEec
Confidence 1 248999999999999999999999999999999999999987888899999999998
Q ss_pred c-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--cEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHH
Q 017052 202 L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMI 277 (378)
Q Consensus 202 a-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 277 (378)
+ |.+|++++++|+.+|+ +++++++++++.+.++++|+ +.++++. ..++.+.+.+...+ ++|+++|++++ ...
T Consensus 113 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~ 188 (288)
T smart00829 113 AAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATGGRGVDVVLNSLAG-EFL 188 (288)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhCCCCcEEEEeCCCH-HHH
Confidence 6 9999999999999999 89999999999999999998 6777665 45677778877776 89999999996 677
Q ss_pred HHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC-----cCCcHHHHHHHHHcCCCCCCcceeeee
Q 017052 278 TTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK-----PKTDLPSLVNRYLKKEFMVDEFITHNL 352 (378)
Q Consensus 278 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~ 352 (378)
...+.+++++ |+++.+|.........+....+.++.++.+..+.... ..+.+.++++++.++.+.+. ..+.|
T Consensus 189 ~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 265 (288)
T smart00829 189 DASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVF 265 (288)
T ss_pred HHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEE
Confidence 8899999997 9999998754222222233333445665554432111 01235677888888887653 34779
Q ss_pred ccccHHHHHHHhhcCcee-EEEE
Q 017052 353 LFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 353 ~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++++++++++.+.+++.. |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 266 PISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cHHHHHHHHHHHhcCCCcceEeC
Confidence 999999999999988665 7663
No 124
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=1.1e-29 Score=249.75 Aligned_cols=290 Identities=20% Similarity=0.224 Sum_probs=244.2
Q ss_pred eEEEEeecC---CCCCCcEEEEEeEEecCcccccccccCCC---CC-------cccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 25 LVVEEVEVN---PPQPEEIRIKVVCTSLCRSDITAWETQAI---FP-------RIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 25 ~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~p-------~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
++|.+-|.. +..++.=+.-|.|+.||..|..+..|... .| .++|.|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666654 34677789999999999999999888761 22 5789999988 3459999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 171 (378)
++.... -++++.+.++.+++|.+|++.++|+|
T Consensus 1499 M~mvpA------------------------------------------------ksLATt~l~~rd~lWevP~~WTleeA 1530 (2376)
T KOG1202|consen 1499 MGMVPA------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEEA 1530 (2376)
T ss_pred EEeeeh------------------------------------------------hhhhhhhhcchhhhhhCCcccchhhc
Confidence 887422 17888999999999999999999999
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEE-ccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCC
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPN 246 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~-Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~ 246 (378)
++.|+.+.||||||..+...++|+++||+ |+|++|++||.+|.+.|+ +|+.+..+++|++++.+ +...++-|.+
T Consensus 1531 stVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSR 1609 (2376)
T KOG1202|consen 1531 STVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSR 1609 (2376)
T ss_pred ccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccc
Confidence 99999999999999999999999999999 459999999999999999 89999999999999876 3345555665
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+.+|...+.+.|.| |+|+|+++... +.++.+++||+.+ ||+..+|...-..+.++....|++|.+++|..+....
T Consensus 1610 --dtsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1610 --DTSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred --cccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhh
Confidence 78999999999999 99999999986 7899999999998 9999999776656667778888899999999765432
Q ss_pred c--CCcHHHHHHHHHcCCCC--CCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 P--KTDLPSLVNRYLKKEFM--VDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
. .+.|.++..++++|.-. ++++.+++|+-+++++||+++.+++++ ||||++.
T Consensus 1686 ege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred cCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 2 24577777887766433 566778999999999999999999998 9999863
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=6.4e-28 Score=219.77 Aligned_cols=246 Identities=30% Similarity=0.398 Sum_probs=195.9
Q ss_pred CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccc
Q 017052 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYH 141 (378)
Q Consensus 62 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~ 141 (378)
++|.++|+|++|+|+++|+++.+|++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 678899999999999999999999999999876
Q ss_pred cccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeE
Q 017052 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (378)
Q Consensus 142 ~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~v 221 (378)
+.|++|+.++.+.++++|+++++++++.+ +.+.+||+++ ...++++|++|||+|+|.+|++++++|+.+|++++
T Consensus 52 ----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~v 125 (277)
T cd08255 52 ----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREV 125 (277)
T ss_pred ----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcE
Confidence 36999999999999999999999999888 7899999997 57899999999999889999999999999999339
Q ss_pred EEEcCChhhHHHHHhCC-CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 222 IGVDTNPEKCEKAKAFG-VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 222 i~v~~~~~~~~~l~~~g-~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+++++++++.+.++++| .+.+++.. . ....+ ++|++||+++........+++++++ |+++.+|....
T Consensus 126 i~~~~~~~~~~~~~~~g~~~~~~~~~--~--------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~ 194 (277)
T cd08255 126 VGVDPDAARRELAEALGPADPVAADT--A--------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGL 194 (277)
T ss_pred EEECCCHHHHHHHHHcCCCccccccc--h--------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCC
Confidence 99999999999999999 45554432 1 11233 8999999998777888999999997 99999987654
Q ss_pred CCeeeccccccccccEEEEeeeccC---------CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcC--c
Q 017052 300 KPEVAAHYGLFLSGRTLKGSLFGGW---------KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG--K 368 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~--~ 368 (378)
. ..........+..++.+...... ...+.+.++++++.++.+... +.+.|+++++++|++.++++ .
T Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~ 271 (277)
T cd08255 195 K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPE 271 (277)
T ss_pred C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHHHHHcCCcc
Confidence 3 11111111123445555543211 112468899999999986543 56889999999999999888 3
Q ss_pred eeEEEE
Q 017052 369 CLRSVI 374 (378)
Q Consensus 369 ~~kvvi 374 (378)
..|+++
T Consensus 272 ~~k~~~ 277 (277)
T cd08255 272 CLKVVL 277 (277)
T ss_pred ceeeeC
Confidence 348764
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=3.2e-25 Score=191.87 Aligned_cols=292 Identities=21% Similarity=0.235 Sum_probs=222.2
Q ss_pred EEEeecC-CCCCCcEEEEEeEEecCcccccccccCC----CCCcccc----cceeEEEEEeCCCCCcCCCCCEEEeeccc
Q 017052 27 VEEVEVN-PPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFG----HEASGIVESVGPGVTEFNEGEHVLTVFIG 97 (378)
Q Consensus 27 ~~~~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (378)
..+.+++ ++++++|+||.+|-+.++.-...+.-.. -.|+.+| ..++|+|++. ..+.+++||.|.++.
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~-- 101 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV-- 101 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec--
Confidence 3444443 5789999999999999875433222111 1233333 3789999995 567899999998872
Q ss_pred CCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCC--CCChhhh-h
Q 017052 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSS--IAPLEKI-C 172 (378)
Q Consensus 98 ~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~--~l~~~~a-a 172 (378)
+|.||.+++.. ..++||. ++++... .
T Consensus 102 -------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 102 -------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 79999999765 4455543 4555444 3
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~ 250 (378)
.+..+.+|||..+++.+..++|++|+|.|| |++|+.+.|+|+.+|+ .|++.+.+++|..+++. +|.+..+||.+ +.
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-e~ 210 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-ES 210 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-cc
Confidence 466688999999999999999999999988 9999999999999999 99999999999998876 79999999983 44
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC---Ceeecc--ccccccccEEEEeeeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVAAH--YGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~~~--~~~~~~~~~i~g~~~~~~~ 325 (378)
+..+++++..+.++|+.||.+|+ ..+...+..|+.. ||++.+|+.+.. .+..+. ...+.+.+++.|+....+.
T Consensus 211 ~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~ 288 (343)
T KOG1196|consen 211 DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYL 288 (343)
T ss_pred CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechh
Confidence 78888998877799999999999 6889999999996 999999976642 111111 2223457777777654433
Q ss_pred c--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 P--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
+ .+.++.+..++.+|+|...+-+ .-.|+..++||.-|-+++-. |.++++.
T Consensus 289 d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 289 DKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 2 2345778889999998876433 23699999999999998886 8888764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=5.8e-23 Score=159.77 Aligned_cols=105 Identities=37% Similarity=0.632 Sum_probs=91.4
Q ss_pred CCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCC
Q 017052 37 PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112 (378)
Q Consensus 37 ~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~ 112 (378)
|+||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|++++.|++||+|++.+...|..|..|+.+..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 7899999999999999999999832 789999999999999999999999999999999988899999999999999
Q ss_pred cccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 113 c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
|......+.+ ..|+|+||+++|+++++||
T Consensus 81 c~~~~~~g~~---------------------~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLG---------------------LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTS---------------------STCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcC---------------------CCCcccCeEEEehHHEEEC
Confidence 9877654333 2369999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.71 E-value=1.6e-16 Score=127.64 Aligned_cols=127 Identities=28% Similarity=0.422 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHH
Q 017052 204 TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282 (378)
Q Consensus 204 ~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 282 (378)
++|++++|+|+.+|+ +|++++++++|++.++++|++++++++ +.++.+.+++++++ ++|+||||+|.+..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--ccccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999997 999999999999999999999999997 66799999999998 99999999998799999999
Q ss_pred HhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcCCcHHHHHHHHH
Q 017052 283 SCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYL 338 (378)
Q Consensus 283 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 338 (378)
+++++ |+++.+|.+. +....++...+ .+++++.|++... .++++++++++.
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99997 9999999988 34455554443 5699999998765 357888888765
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.41 E-value=3.7e-12 Score=120.02 Aligned_cols=177 Identities=16% Similarity=0.180 Sum_probs=133.0
Q ss_pred hHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+.++.+..+ ..+|++|+|.|+|.+|+.+++.|+.+|+ +|++++.++.|.+.++.+|+..+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v--- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV--- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH---
Confidence 3445545444 3689999999999999999999999999 89999999999999999998433 1 11222
Q ss_pred hCCCccEEEeccCChHHHHHH-HHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHH--HHHHH
Q 017052 260 TDGGADYSFECIGDTGMITTA-LQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP--SLVNR 336 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~ 336 (378)
.++|+||+|+|....+... +..++++ |+++.+|.. +..+++.... .+.+++.++..... ..+++ +.+.+
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~L~-~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKGLK-ENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHHHH-hhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2689999999988777765 8999997 999999854 2334433322 34777776654321 11344 78999
Q ss_pred HHcCCC-CCCcceeee-----eccc-cHHHHHHHhhcCcee--EEEEeCC
Q 017052 337 YLKKEF-MVDEFITHN-----LLFE-DINQAFNLMKEGKCL--RSVIHMP 377 (378)
Q Consensus 337 ~~~~~~-~~~~~i~~~-----~~l~-~i~~A~~~l~~~~~~--kvvi~~~ 377 (378)
+.+|.+ ++...+++. ++|+ |+.++++.+.++... |+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999998 788777888 8899 999999999887653 8877654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.31 E-value=2.8e-11 Score=116.89 Aligned_cols=153 Identities=18% Similarity=0.208 Sum_probs=111.7
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCC-----------chHHHHHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNN-----------EPVQQVIKR 258 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~-----------~~~~~~i~~ 258 (378)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 5543211 133333333
Q ss_pred H-hC--CCccEEEeccCCh-----HH-HHHHHHHhccCCccEEEeccCCCCC-eeecccccc-c-cccEEEEeeeccCCc
Q 017052 259 I-TD--GGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLF-L-SGRTLKGSLFGGWKP 326 (378)
Q Consensus 259 ~-~~--~~~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~-~-~~~~i~g~~~~~~~~ 326 (378)
. .. +++|+||+|++.+ .. .++.++.++++ |++++++...+.. ....+...+ . +++++.|.....
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence 2 33 3799999999963 35 48999999997 9999999753321 233332333 2 688888876321
Q ss_pred CCcHH-HHHHHHHcCCCCCCccee
Q 017052 327 KTDLP-SLVNRYLKKEFMVDEFIT 349 (378)
Q Consensus 327 ~~~~~-~~~~~~~~~~~~~~~~i~ 349 (378)
..+. ...+++.++.+.+..+++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 2444 588999999887766654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.26 E-value=1.8e-12 Score=103.53 Aligned_cols=120 Identities=16% Similarity=0.221 Sum_probs=76.6
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC--ChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 314 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 314 (378)
||++++++|+ ..++ ...+++|+|||++| +...+..+++++ ++ |+++.++. ....+.........
T Consensus 1 LGAd~vidy~--~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYR--DTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETT--CSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHHHHCHHC
T ss_pred CCcCEEecCC--Cccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhhhcccce
Confidence 6999999997 4555 22349999999999 655556777888 86 99999974 00111111111122
Q ss_pred EEEEeeecc--CC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 315 TLKGSLFGG--WK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 315 ~i~g~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++ ..+.. .. ..+.++++.+++.+|++++. +.++||++++.+|++.+++++.. |+||
T Consensus 67 ~~--~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RY--SFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EE--ECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EE--EEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 22 22211 11 12458999999999998776 88999999999999999999997 9986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.57 E-value=3.6e-07 Score=82.95 Aligned_cols=163 Identities=19% Similarity=0.239 Sum_probs=100.2
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.+.+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++ ++.+.+... ..++.+ + .+..+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGEIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecchhh-C-CCCCC
Confidence 35688999999999977 88888888887753 69999999999888876 343322111 111111 1 12234
Q ss_pred CccEEEecc------CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHHHHHHH
Q 017052 263 GADYSFECI------GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336 (378)
Q Consensus 263 ~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 336 (378)
.||+|+... +....+.++.+.|+++ |+++..+..... .+ + ..+.....+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~--~-~~~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL--P-EEIRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC--C-HHHHHhHHHHhccccC---CCCHHHHHHH
Confidence 799988432 2346789999999997 999987655432 11 1 1111121111111111 1245666777
Q ss_pred HHcCCCC-CCcceeeeeccccHHHHHHHh
Q 017052 337 YLKKEFM-VDEFITHNLLFEDINQAFNLM 364 (378)
Q Consensus 337 ~~~~~~~-~~~~i~~~~~l~~i~~A~~~l 364 (378)
+.+..+. ........++++++.++++.+
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHh
Confidence 7764433 332244567899999999988
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.48 E-value=1.5e-06 Score=84.24 Aligned_cols=107 Identities=20% Similarity=0.266 Sum_probs=81.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCC-----------CCchHHHHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPND-----------NNEPVQQVIKRI 259 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~-----------~~~~~~~~i~~~ 259 (378)
.++.+|+|+|+|.+|++++++|+.+|+ .|++++.+.++++.++++|++.+. +..+ -..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 457899999999999999999999999 799999999999999999987632 3211 012333333333
Q ss_pred hC---CCccEEEecc---CChH---HHHHHHHHhccCCccEEEeccCCCC
Q 017052 260 TD---GGADYSFECI---GDTG---MITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 260 ~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
.. .++|+||+|+ |.+. ..++.++.++++ +.+++++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 32 2799999999 6533 567889999997 999999876553
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.40 E-value=6.4e-06 Score=78.35 Aligned_cols=105 Identities=23% Similarity=0.334 Sum_probs=79.9
Q ss_pred hhHHHHHhhcCCC-CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~~~-~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
..|.++.+..++. .|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal-- 265 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA-- 265 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH--
Confidence 4556654443554 89999999999999999999999999 899999998887766666754 221 22222
Q ss_pred HhCCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccCCC
Q 017052 259 ITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~ 299 (378)
.++|+||+++|....+. ..+..++++ +.++.+|....
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~ 303 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN 303 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence 16899999999876665 678888986 88999887653
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.34 E-value=1.3e-05 Score=73.43 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=76.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+++|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|...+ .+ .++.+.+ .++|+||+|+.
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l~~~l-----~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SELAEEV-----GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHHHHHh-----CCCCEEEECCC
Confidence 68999999999999999999999999 99999999999888888887533 22 1222222 26899999987
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCee
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (378)
........++.++++ +.+++++.......+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~ 249 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDF 249 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCcCe
Confidence 644456677889986 999999877654433
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.27 E-value=6.5e-08 Score=92.79 Aligned_cols=160 Identities=16% Similarity=0.173 Sum_probs=105.2
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccc
Q 017052 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (378)
.-|.|+++.+.+|+++..+ +|++.+.. |+.|.+| ++.|......+..+ .
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~~l---------------------~ 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGKVL---------------------E 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchHHH---------------------H
Confidence 4688999999999888765 66666666 7777777 55565554422111 1
Q ss_pred cceeeEEEEeCCceee---C-CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeE
Q 017052 146 SSFSEYTVVHSGCAVK---V-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (378)
Q Consensus 146 g~~a~~~~v~~~~~~~---i-P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~v 221 (378)
+.|++++.++. .+.. | +..+|...+|. ....+..+..++++|+|+|+|.+|..+++.++..|+.+|
T Consensus 138 ~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 138 RLFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 47888777764 3332 3 23333332221 111244455788999999999999999999999996689
Q ss_pred EEEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHH
Q 017052 222 IGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (378)
Q Consensus 222 i~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 276 (378)
+++.++.++.+ +++.+|.. .+.+ .++.+.+. ++|+||.|++.+..
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l~-----~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYLA-----EADIVISSTGAPHP 253 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHHh-----hCCEEEECCCCCCc
Confidence 99999988754 66777763 2222 12222222 68999999987543
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.21 E-value=1.9e-05 Score=74.74 Aligned_cols=103 Identities=21% Similarity=0.367 Sum_probs=78.3
Q ss_pred hHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
++.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal--- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA--- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH---
Confidence 3444434434 3689999999999999999999999999 899999988887777777762 221 11222
Q ss_pred hCCCccEEEeccCChHHHHH-HHHHhccCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGDTGMITT-ALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~-~~~~l~~~~G~~v~~g~~~ 298 (378)
.+.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 257999999998777764 78888986 8999988754
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.19 E-value=6.3e-06 Score=76.12 Aligned_cols=107 Identities=23% Similarity=0.283 Sum_probs=80.0
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCC----CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI----SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-E 232 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~----~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~-~ 232 (378)
..+++|+.+..+.++... +.+.++.++ +.+.. .++++|+|+|+|.+|+.+++.++..|..+|+++.++.++. +
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 568889999988887765 666777775 33332 4799999999999999999999998877899999998865 6
Q ss_pred HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHH
Q 017052 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (378)
Q Consensus 233 ~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 276 (378)
+++++|.. +++++ ++.+.+. ..|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~~----~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD----ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH----HHHHHHh-----cCCEEEECCCCCch
Confidence 77788873 33321 2333232 57999999998654
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.05 E-value=4.5e-05 Score=72.89 Aligned_cols=102 Identities=23% Similarity=0.349 Sum_probs=78.8
Q ss_pred HHHHHhhcCC-CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh
Q 017052 182 LGAAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 182 ~~al~~~~~~-~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
+-++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|...+ .+.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHHHHh---
Confidence 4445455444 679999999999999999999999999 89999998887767766776422 1222222
Q ss_pred CCCccEEEeccCChHH-HHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..|+++.+.|.... ....+..|+++ +.++.+|...
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 57999999997655 47899999997 9999998753
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.04 E-value=7.7e-05 Score=66.71 Aligned_cols=130 Identities=20% Similarity=0.192 Sum_probs=81.8
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
+|.+|.. +...++.+++.+++..+.- +.+.. .+..+. ..+.++++||-+|+|. |..++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTH-PTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCC-HHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555543 6678899999888776542 21111 122221 1256899999999986 877776554 67757999999
Q ss_pred ChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCCh---HHHHHHHHHhccCCccEEEeccC
Q 017052 227 NPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 227 ~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++...+.+++. +....+... ... .||+|+-..... ..+..+.+.|+++ |+++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~-------------~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLP-------------QGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEc-------------cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988777652 221111110 011 589998655432 3456778889997 999987654
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.92 E-value=0.00017 Score=69.26 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=85.7
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
.++.+|+...-..+--......+.+..+.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+..
T Consensus 217 PV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~ 295 (476)
T PTZ00075 217 PAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAM 295 (476)
T ss_pred eEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHh
Confidence 355667765544332111112223344444433 4579999999999999999999999999 89999888777655555
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccCC
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 298 (378)
.|+..+ .+.+.++ ..|+|+.++|....+. ..+..|+++ +.++++|...
T Consensus 296 ~G~~~~--------~leell~-----~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 296 EGYQVV--------TLEDVVE-----TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred cCceec--------cHHHHHh-----cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 565321 2222222 5899999998766664 789999997 9999998763
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.87 E-value=0.00012 Score=69.27 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=70.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++.+|+|+|+|.+|+.+++.|+.+|+ +|+++++++++.+.+.. ++......+.+ ...+.+.+ ..+|+||+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888777654 55433333221 12232222 2689999997
Q ss_pred C---C--hH-HHHHHHHHhccCCccEEEeccCCC
Q 017052 272 G---D--TG-MITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 272 g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+ . +. .....++.++++ +.+++++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 21 236777889987 99999886544
No 143
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.84 E-value=0.0003 Score=64.06 Aligned_cols=99 Identities=17% Similarity=0.302 Sum_probs=72.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|+|+|.|.+|+++++.++..|+ +|+++.+++++.+.+.++|...+ .+ .++.+.+ .++|+|++++.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~l~~~l-----~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NKLEEKV-----AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HHHHHHh-----ccCCEEEECCC
Confidence 58899999999999999999999999 89999999988877777775422 11 1222222 26899999987
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCee
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (378)
..-.-...++.++++ ..+++++..+...++
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf 248 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF 248 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence 532234567778886 888888776654433
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.78 E-value=0.00017 Score=74.07 Aligned_cols=113 Identities=23% Similarity=0.285 Sum_probs=75.3
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
++++|..+++..++.+ +..+.+++..... ......+|+++||+|+ |++|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 6778888888777777 6677777652110 0122346899999997 9999999999999999 899999
Q ss_pred CChhhHHHHHh-CCC--c-E--EeCCCCCCchHHHHHHHHh--CCCccEEEeccC
Q 017052 226 TNPEKCEKAKA-FGV--T-E--FLNPNDNNEPVQQVIKRIT--DGGADYSFECIG 272 (378)
Q Consensus 226 ~~~~~~~~l~~-~g~--~-~--vi~~~~~~~~~~~~i~~~~--~~~~d~vid~~g 272 (378)
++.++.+.+.. ++. . . ..|..+ ..++.+.+.+.. .+++|++|++.|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 99887655433 433 1 1 224331 233333333332 247999999998
No 145
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.69 E-value=7.8e-05 Score=71.94 Aligned_cols=160 Identities=21% Similarity=0.182 Sum_probs=96.6
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccc
Q 017052 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (378)
.-|+|+++.+.+|+++..+.-+|+. .. |.+|++. +..|......+.. -.
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~-----qI----lgQvk~a-~~~a~~~g~~g~~---------------------l~ 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEP-----QI----LGQVKDA-YALAQEAGTVGTI---------------------LN 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCCh-----HH----HHHHHHH-HHHHHHcCCchHH---------------------HH
Confidence 3599999999999998776444443 22 2233322 2222222211100 01
Q ss_pred cceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhc---CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEE
Q 017052 146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA---DISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222 (378)
Q Consensus 146 g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~---~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi 222 (378)
+.|++ .+++|+.+..+.+.. ..+.+.++.++.... +-.++++|+|+|+|.+|+++++.++..|+.+++
T Consensus 140 ~lf~~--------a~~~~k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 140 RLFQK--------AFSVAKRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred HHHHH--------HHHHHhhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 23433 344555554433322 224556666653222 236789999999999999999999999987899
Q ss_pred EEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 223 GVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 223 ~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
++.++.++.+ +++.+|.+ ++.+. ++.+.+ .++|+||+|++.+.
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~~----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPLD----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeHH----HHHHHh-----ccCCEEEECCCCCC
Confidence 9999988855 66777753 33221 222222 26899999998754
No 146
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.67 E-value=6.6e-05 Score=75.36 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=59.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHhCCCcEEeCCCC-
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---------------------PEKCEKAKAFGVTEFLNPND- 247 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~---------------------~~~~~~l~~~g~~~vi~~~~- 247 (378)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 35667788899887776531
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+... +.+ ..++|+||+++|..
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCC
Confidence 11111 112 12689999999974
No 147
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.66 E-value=0.00029 Score=61.08 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=60.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCC----cEEeCCCCCCchHHHHHHHHhCC--Cc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGV----TEFLNPNDNNEPVQQVIKRITDG--GA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~----~~vi~~~~~~~~~~~~i~~~~~~--~~ 264 (378)
.++.++|+|| +++|.+.++.....|+ +|+.++|+.++++.+. +++. ...+|..+ ..+..+.+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578999999 9999999999999999 9999999999987664 4773 22345542 33555566655554 69
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998884
No 148
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.62 E-value=0.00023 Score=57.15 Aligned_cols=76 Identities=26% Similarity=0.369 Sum_probs=55.7
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCc--EEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT--EFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
+--+++++||+|+|++|++++..+...|+++++.+.|+.+|.+.+. .++.. ..+.++ ++.+.+. .+|+
T Consensus 8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~~-----~~Di 78 (135)
T PF01488_consen 8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEALQ-----EADI 78 (135)
T ss_dssp STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHHH-----TESE
T ss_pred CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHHh-----hCCe
Confidence 3446899999999999999999999999978999999998876664 45322 244443 2222222 6899
Q ss_pred EEeccCCh
Q 017052 267 SFECIGDT 274 (378)
Q Consensus 267 vid~~g~~ 274 (378)
||+|++.+
T Consensus 79 vI~aT~~~ 86 (135)
T PF01488_consen 79 VINATPSG 86 (135)
T ss_dssp EEE-SSTT
T ss_pred EEEecCCC
Confidence 99998874
No 149
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.53 E-value=0.014 Score=53.24 Aligned_cols=140 Identities=13% Similarity=0.148 Sum_probs=85.6
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC---CCCCCeEEEEcc-ChHHHHHHHHHH-HcCCCeE
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRI 221 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~VLI~Ga-g~vG~~aiqla~-~~g~~~v 221 (378)
.|-+|.++..+....- .....++..-| -+.|+|. |.+... .-..+.|+|.+| +-.++.++.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4666766655433211 11112222222 3456664 322221 234467777787 778888888888 4554489
Q ss_pred EEEcCChhhHHHHHhCCC-cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 222 IGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 222 i~v~~~~~~~~~l~~~g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
|++++ ..+....+.+|. +.++.|+ .|..+....--+++|..|....+..+-..+...--+.+.+|....
T Consensus 166 vglTS-~~N~~Fve~lg~Yd~V~~Yd--------~i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 166 VGLTS-ARNVAFVESLGCYDEVLTYD--------DIDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEEec-CcchhhhhccCCceEEeehh--------hhhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 99954 556668889996 5677775 344443345578999999988877777777765344667775543
No 150
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0016 Score=59.01 Aligned_cols=77 Identities=26% Similarity=0.391 Sum_probs=56.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~vid~ 270 (378)
+++||+|+ |++|..+++.+...|+ +|++++++.++.+.+...+...+ .|..+ ...+.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 57899998 9999999999999999 89999999888777766665433 35442 334444444432 2378999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 151
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.002 Score=56.82 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=67.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---CCCcEEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~---~g~~~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +. .+..+.+ |..+ ...+.+.+.+.. .++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4789999998 9999999999999999 899999988877555 22 2222333 3321 233333333322 136
Q ss_pred ccEEEeccCChH-----------------------HHHHHHHHhccCCccEEEeccCC
Q 017052 264 ADYSFECIGDTG-----------------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 264 ~d~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+|.++.+.+... .++..+.++.++ |+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899998887421 133445566665 8898887653
No 152
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.0018 Score=55.14 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=76.2
Q ss_pred hhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhCCCcEEe-CCCCCCch
Q 017052 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAKAFGVTEFL-NPNDNNEP 251 (378)
Q Consensus 177 ~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~----~~~~l~~~g~~~vi-~~~~~~~~ 251 (378)
+...|. +.+...+++|++||=+|+| .|..++-+|+..| +|+.+.+.++ ....++.+|...+. ...|....
T Consensus 58 P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G 132 (209)
T COG2518 58 PHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG 132 (209)
T ss_pred cHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 334444 3477889999999999986 4899999999988 8999999887 34446678886543 22222222
Q ss_pred HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 252 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
| ... +||.|+-+.+.+..-..+++.|+++ |+++.-
T Consensus 133 ~-------~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 133 W-------PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred C-------CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 2 233 8999998888766667889999997 987764
No 153
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.36 E-value=0.00097 Score=60.95 Aligned_cols=97 Identities=22% Similarity=0.288 Sum_probs=62.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcE-EeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~-vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +... +.... .+ ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 45789999999976 777777665 5666999999999887776552 2211 11110 01 1111234899
Q ss_pred EEEeccCCh---HHHHHHHHHhccCCccEEEeccC
Q 017052 266 YSFECIGDT---GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 266 ~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+|+...... ..+..+.+.++++ |+++..|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998654332 3456678899997 999887643
No 154
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.33 E-value=0.0025 Score=53.14 Aligned_cols=101 Identities=21% Similarity=0.248 Sum_probs=70.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
...++++|+.++=+|+|. |...+++|+..-..+||+++++++..+..+ +||.+.+.... .+..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC--
Confidence 456789999887788853 777788885544449999999999887764 48887654432 22223333221
Q ss_pred CccEEEeccCC--hHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFECIGD--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|.+|---|+ +..++.++..|+++ |++|.=
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~n 134 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVAN 134 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEE
Confidence 58999865443 35788899999997 998754
No 155
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.32 E-value=0.0014 Score=55.13 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=57.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc---EEeCCCC--CCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT---EFLNPND--NNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~---~vi~~~~--~~~~~~~~i~~~~~~~~d~ 266 (378)
.|.+|||+|+ +++|+++++-...+|- +||..+|++++++.+++.... .+.|..+ +...+.+++++..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999966 9999999999999998 999999999999988875432 2445542 12335555554322 5789
Q ss_pred EEeccC
Q 017052 267 SFECIG 272 (378)
Q Consensus 267 vid~~g 272 (378)
++++.|
T Consensus 82 liNNAG 87 (245)
T COG3967 82 LINNAG 87 (245)
T ss_pred eeeccc
Confidence 999887
No 156
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.25 E-value=0.0037 Score=56.14 Aligned_cols=110 Identities=23% Similarity=0.296 Sum_probs=72.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee----CCCCCCchHHHHHHHH--h
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL----NPNDNNEPVQQVIKRI--T 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi----~~~~~~~~~~~~i~~~--~ 260 (378)
.|+.|+|+|| +++|.+++.-....|+ .++.+.+..++++.+ ++.+... ++ |.+ +.++..+.+.+. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs-~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVS-DEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccC-CHHHHHHHHHHHHHh
Confidence 6889999999 8999999888888899 677777777766555 3444433 22 332 133444444332 2
Q ss_pred CCCccEEEeccCCh-------------------------HHHHHHHHHhccCC-ccEEEeccCCCCCeee
Q 017052 261 DGGADYSFECIGDT-------------------------GMITTALQSCCDGW-GLAVTLGVPKLKPEVA 304 (378)
Q Consensus 261 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~ 304 (378)
-|++|+.++..|-. .....++..|.+.+ |+++.++...+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 34899999987732 23445666776654 9999998766543333
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0022 Score=58.22 Aligned_cols=78 Identities=19% Similarity=0.333 Sum_probs=56.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHH---hCCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRI---TDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~---~~~~~d~v 267 (378)
.+++|||+|+ |++|..+++.+...|+ +|+++++++++.+.+...+...+ .|..+ ..++.+.+... ..+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4678999998 9999999999988999 89999999988887776665443 34442 22333333332 23478999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
+++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 158
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.19 E-value=0.0052 Score=52.83 Aligned_cols=102 Identities=19% Similarity=0.299 Sum_probs=69.3
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hCC-CcEEeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFG-VTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~----~~g-~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
...++.++++||.+|+|. |..++.+|+..+. .+|++++.+++..+.++ .++ .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 456788999999999987 8999999987642 38999999998887654 356 23322211 1222222221
Q ss_pred CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999975442 34677788899997 998753
No 159
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.18 E-value=0.0034 Score=55.90 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE-Ee--CCCCCCchHHHHHH-HHh
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FL--NPNDNNEPVQQVIK-RIT 260 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~-vi--~~~~~~~~~~~~i~-~~~ 260 (378)
...++++||+|| +++|...+..+...|. .++.+.|+.+|++.+.+ .+... ++ |.. +.+-.+.+. ++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs--~~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLS--DPEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC--ChhHHHHHHHHHH
Confidence 346789999999 9999999999999999 89999999999877643 33322 33 443 333333333 333
Q ss_pred CC--CccEEEeccCC
Q 017052 261 DG--GADYSFECIGD 273 (378)
Q Consensus 261 ~~--~~d~vid~~g~ 273 (378)
.. .+|+.+++.|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 22 78999999984
No 160
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.15 E-value=0.0037 Score=52.80 Aligned_cols=94 Identities=21% Similarity=0.304 Sum_probs=63.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC--
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD-- 273 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-- 273 (378)
|+|+|+ |.+|..+++.+...|. +|+++.+++++.+. ..+... +..+ ..+. +.+.+... ++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d--~~d~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGD--LFDP-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESC--TTCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceee--ehhh-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999998 99999999998877 344433 3222 1122 22333222 79999999984
Q ss_pred --hHHHHHHHHHhccC-CccEEEeccCC
Q 017052 274 --TGMITTALQSCCDG-WGLAVTLGVPK 298 (378)
Q Consensus 274 --~~~~~~~~~~l~~~-~G~~v~~g~~~ 298 (378)
.......++.++.. -.+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 23455556665443 14677766544
No 161
>PRK06182 short chain dehydrogenase; Validated
Probab=97.13 E-value=0.0029 Score=57.29 Aligned_cols=79 Identities=20% Similarity=0.374 Sum_probs=56.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
++++++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+...+...+ .|..+ ..++.+.+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999998 9999999999988999 89999999888766655554332 34431 333444444332 23799999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 162
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.13 E-value=0.0036 Score=59.48 Aligned_cols=113 Identities=17% Similarity=0.153 Sum_probs=76.6
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchH
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~ 252 (378)
.+..+-...+..+.+..++++|++||.+|+| .|..++.+++..|+ +|++++.+++..+.+++......+... ..++
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDY 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECch
Confidence 3433444555556678889999999999985 57778888988898 999999999999988764321111111 1112
Q ss_pred HHHHHHHhCCCccEEEec-----cCC---hHHHHHHHHHhccCCccEEEec
Q 017052 253 QQVIKRITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 253 ~~~i~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
. .+ .+.+|.|+.. +|. ...+..+.+.|+++ |+++...
T Consensus 223 ~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 R----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred h----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 1 11 3478988742 332 24677888899997 9988754
No 163
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.11 E-value=0.0049 Score=52.23 Aligned_cols=80 Identities=20% Similarity=0.314 Sum_probs=58.8
Q ss_pred CCCeEEEEcc--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-EeCCCC--CCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FLNPND--NNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga--g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-vi~~~~--~~~~~~~~i~~~~~~~~d~ 266 (378)
..+.|||+|+ |++|.+++.=...-|+ .|+++.++-+....|. ++|... -+|.++ +-..+...+++.+.|..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999974 8999999988889999 9999999999887776 677533 344442 1223444555666678999
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
.++..|-
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997775
No 164
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.07 E-value=0.007 Score=56.92 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=67.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC---Cc-EEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VT-EFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g---~~-~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++|||+|+|.+|+.+++.+.+.+-.+|+..+++.++.+.+.... .. ..+|.. +...+.+.|+ ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHh-----cCCEEEEe
Confidence 57999999999999999988888459999999999988887653 22 234443 1234444443 46999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
....-.+..+-.|++.+ =.+++......
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~~ 103 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYEE 103 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCCc
Confidence 98754443333455543 55666655543
No 165
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.06 E-value=0.0058 Score=56.49 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=70.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hCCCcEEeCCCCCCchHHHHHHHHh
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~----~~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+.... .+..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--
Confidence 355678899999999997 59999999998763 26999999998765554 46665443222 122111111
Q ss_pred CCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+|+.+.+........++.++++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 137999998877655566778889997 987763
No 166
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.011 Score=52.13 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC---cEEe--CCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---TEFL--NPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~---~~vi--~~~~~~~~~~~~i~~~~~--~~ 263 (378)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++...+ +.+.. -+.+ |.. +..++.+.+.++.. ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVR-DEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999998888899 899999988765443 33321 1222 332 13334444443322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 8999998763
No 167
>PRK12742 oxidoreductase; Provisional
Probab=96.97 E-value=0.017 Score=50.82 Aligned_cols=77 Identities=21% Similarity=0.347 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH-HHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK-AKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~-l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
++++|||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+. ..+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999998 9999999999999999 7776644 4444433 344555432 23321 2233333332 23689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
No 168
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.96 E-value=0.0045 Score=52.27 Aligned_cols=91 Identities=31% Similarity=0.421 Sum_probs=63.5
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
--.|++|.|+|.|.+|+.+++.++..|+ +|++.+++....+.....+.. . .++.+.+. ..|+|+.+
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~-------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y-------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E-------SSHHHHHH-----H-SEEEE-
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e-------eehhhhcc-----hhhhhhhh
Confidence 3469999999999999999999999999 999999988877755555542 1 13444444 36898887
Q ss_pred cCChH-----HHHHHHHHhccCCccEEEecc
Q 017052 271 IGDTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
...++ .-...+..|+++ ..+|+++-
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccc
Confidence 76322 234567888886 77777643
No 169
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.95 E-value=0.0012 Score=50.34 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=62.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|||+|+|.+|..-++.+...|+ +|+++.... +..+ +.-... ...+.+. -.++++||-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-----~~~~~~~-----l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-----RREFEED-----LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-----ESS-GGG-----CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-----hhhHHHH-----HhhheEEEecCC
Confidence 57899999999999999999999999 899987775 2222 111121 1122111 127899999998
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeec
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 305 (378)
.+..-+......+.. +.++.+.+.+...++.+
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF~~ 101 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDFIF 101 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSEE-
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeEEc
Confidence 866666666667766 99999977665554443
No 170
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.92 E-value=0.0082 Score=49.17 Aligned_cols=100 Identities=20% Similarity=0.362 Sum_probs=64.4
Q ss_pred HHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 184 AAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 184 al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
++.+..+ .-.|++++|.|-|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.... .+.+.+ .
T Consensus 12 ~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~-----~ 77 (162)
T PF00670_consen 12 GIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------TLEEAL-----R 77 (162)
T ss_dssp HHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----T
T ss_pred HHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------CHHHHH-----h
Confidence 3333434 4589999999999999999999999999 99999999988877766666422 122222 2
Q ss_pred CccEEEeccCChHH-HHHHHHHhccCCccEEEeccCC
Q 017052 263 GADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 263 ~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..|++|-++|..+. -.+-+..|+++ ..+..+|...
T Consensus 78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~d 113 (162)
T PF00670_consen 78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGHFD 113 (162)
T ss_dssp T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSSST
T ss_pred hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCcCc
Confidence 57999999987554 45778899985 6666666543
No 171
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.013 Score=51.95 Aligned_cols=101 Identities=20% Similarity=0.231 Sum_probs=61.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ |.+|..++..+...|. +|+++.++.+ +.+. ++..+... . .|..+ ..+....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4689999998 9999999998888998 7888877643 2222 22233221 2 24331 2333333333322
Q ss_pred CCccEEEeccCCh-------------------HHHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGDT-------------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+++|+++.+.|.. ..++.+.+.+..+ |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689988877542 1334455555555 88888765
No 172
>PRK08017 oxidoreductase; Provisional
Probab=96.90 E-value=0.0064 Score=54.26 Aligned_cols=77 Identities=27% Similarity=0.425 Sum_probs=55.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHH---HHHHHhCCCccEEEe
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQ---VIKRITDGGADYSFE 269 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~---~i~~~~~~~~d~vid 269 (378)
+++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+++.+...+ .|..+ ..++.+ .+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 89999999998888877776443 34431 222222 233323347888888
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 173
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.89 E-value=0.017 Score=57.20 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=40.1
Q ss_pred hhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 187 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
...+.+.|++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4556778999999998 9999999999988999 899999988876543
No 174
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0046 Score=57.69 Aligned_cols=79 Identities=24% Similarity=0.402 Sum_probs=54.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 5789999998 9999999999999999 899999988876533 34555432 24431 223333332221 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 175
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0076 Score=52.79 Aligned_cols=77 Identities=22% Similarity=0.331 Sum_probs=53.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE--eCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v--i~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+++++.... .|..+ ..++.+.+..+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57899998 9999999988888899 89999998877766665543332 23331 23344444444434799999887
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 54
No 176
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.83 E-value=0.0092 Score=57.22 Aligned_cols=80 Identities=21% Similarity=0.211 Sum_probs=57.0
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
..+--.+++|||+|+|.+|.+++..+...|+..++.+.++.++.+.+ +.++...++.++ ++.+.+ ..+|+
T Consensus 175 ~~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~----~l~~~l-----~~aDi 245 (414)
T PRK13940 175 QLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS----ELPQLI-----KKADI 245 (414)
T ss_pred HhcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH----HHHHHh-----ccCCE
Confidence 33445788999999999999999999999987899999998876555 445522333322 222222 25899
Q ss_pred EEeccCChHH
Q 017052 267 SFECIGDTGM 276 (378)
Q Consensus 267 vid~~g~~~~ 276 (378)
||.|++.+..
T Consensus 246 VI~aT~a~~~ 255 (414)
T PRK13940 246 IIAAVNVLEY 255 (414)
T ss_pred EEECcCCCCe
Confidence 9999998643
No 177
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0093 Score=52.79 Aligned_cols=76 Identities=21% Similarity=0.432 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEE-eCCCCCCch-HHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEP-VQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~v-i~~~~~~~~-~~~~i~~~~~~~~d~vi 268 (378)
++++++|+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+...+ .|.. +.. +.+.+.. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~--~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVG--DDAAIRAALAA--AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCC--CHHHHHHHHHH--hCCCCEEE
Confidence 5789999998 9999999999999999 89999998877655533 444332 3443 222 2222222 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 178
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.016 Score=52.01 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ +.++... . .|..+ ..++.+.+.... .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 9999999999999999 899999988765443 4444322 2 24431 333434444332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998773
No 179
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.014 Score=54.59 Aligned_cols=79 Identities=27% Similarity=0.256 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..++.+.+.... .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 5688999998 9999999999999999 899998988766543 33454332 24431 233333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 180
>PRK04148 hypothetical protein; Provisional
Probab=96.81 E-value=0.0095 Score=47.24 Aligned_cols=97 Identities=21% Similarity=0.228 Sum_probs=67.4
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC-CCCCchHHHHHHHHhCCCccE
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-NDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~-~~~~~~~~~~i~~~~~~~~d~ 266 (378)
.....++.+++++|.| .|..+++.+...|. .|++++.+++..+.+++.+...+.+. -+.+..+. .++|+
T Consensus 11 ~~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y--------~~a~l 80 (134)
T PRK04148 11 NYEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY--------KNAKL 80 (134)
T ss_pred hcccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH--------hcCCE
Confidence 3334456889999999 88766666667898 99999999999999999887665532 11122221 27899
Q ss_pred EEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 267 SFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 267 vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|+.+-..+++...++++-++-+.-++..
T Consensus 81 iysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 81 IYSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 9988887777777777665542444443
No 181
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0089 Score=53.42 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~v 267 (378)
+|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +.++... ..|..+ ..++...+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 899998887765544 4454422 224431 2233333333321 378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998864
No 182
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.02 Score=51.48 Aligned_cols=79 Identities=23% Similarity=0.258 Sum_probs=52.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ...+... . .|..+ ..++...+.+.. .
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 36889999998 9999999999989999 899998887765432 2233222 2 24331 233444444432 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 37899998775
No 183
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.75 E-value=0.024 Score=48.19 Aligned_cols=101 Identities=23% Similarity=0.177 Sum_probs=61.5
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCC-Ccc
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDG-GAD 265 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~-~~d 265 (378)
...+++|++||.+|+|.-+.......+..+..++++++.++.. +..+...+ .+.. +....+.+.+..++ ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~--~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFT--DEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCC--ChhHHHHHHHHhCCCCcc
Confidence 3457899999999987655544433343343389999998764 11233222 1222 23333445544444 899
Q ss_pred EEEe-cc----CC------------hHHHHHHHHHhccCCccEEEec
Q 017052 266 YSFE-CI----GD------------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 266 ~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+|+. .. |. ...+..+.++|+++ |+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 9994 21 21 24677788899997 9988753
No 184
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.74 E-value=0.038 Score=47.71 Aligned_cols=113 Identities=16% Similarity=0.094 Sum_probs=70.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.|++|||+|+|.+|..-++.+...|+ .|++++.+.. ....+.+.|--..+.-+ .. ...+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~---~~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARC---FD-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCC---CC-HHHh-----CCcEEEEECC
Confidence 57899999999999999999999999 8888865432 22333333321222111 11 1111 2789999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+.++.-.......... |.++++.+.....++.++...-..++++
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~i 121 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVV 121 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEE
Confidence 8865656666666665 8888766554445555554432224444
No 185
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.021 Score=51.01 Aligned_cols=79 Identities=16% Similarity=0.232 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE-E--eCCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~ 263 (378)
+++++||+|+ |++|..+++.+...|+ +++.+++++++.+..++ .+... . .|..+ ..++...+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 5789999998 9999999999888999 78888888776644443 23222 2 23321 2233333433322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999883
No 186
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.71 E-value=0.02 Score=44.68 Aligned_cols=100 Identities=17% Similarity=0.247 Sum_probs=66.4
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~ 260 (378)
....+.++++||-+|+|. |..+..+++..+..++++++.++...+.+++ ++...+ +..+ ... ... ..
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~~---~~~-~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD--APE---ALE-DS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc--ccc---cCh-hh
Confidence 455677888999999876 8888899988754489999999988777643 443322 2111 110 011 11
Q ss_pred CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+|+-..+. ...+..+.+.|+++ |+++.-
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 2379999865432 24678889999997 998764
No 187
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.71 E-value=0.02 Score=55.84 Aligned_cols=79 Identities=20% Similarity=0.332 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKC-EKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~-~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++. ++. +..++++... ..|..+ ..+....+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999988 9999999999999999 888887643 222 3334455433 234441 222333333322 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
No 188
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0094 Score=53.18 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+.++++..+...++.... . .|..+ ..++.+.+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999998 9999999999988999 8999988877665555543222 2 23331 2333333333222 3789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 189
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0095 Score=53.22 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=54.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC-cEEe--CCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~-~~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
..++++||+|+ |.+|..++..+...|+ +|+++.++.++.+.+.. .+. ..++ |..+ ..++.+.+.++. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 46799999988 9999999999999999 89999998887654432 121 1222 3321 234444444332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
No 190
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.01 Score=52.23 Aligned_cols=79 Identities=22% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-H---HHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-K---AKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~---l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+ . ++..+...+ .|..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999998 9999999999988899 8999988776532 2 222333222 23321 233333333322 2378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+|+.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998763
No 191
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.011 Score=54.37 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--cEE---eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEF---LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~~v---i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 899999988876544 44542 111 34431 233333333332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 8999999884
No 192
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0084 Score=53.73 Aligned_cols=83 Identities=20% Similarity=0.252 Sum_probs=55.1
Q ss_pred cCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCc--EE--eCCCCCCchHHHHHHHHhC-
Q 017052 189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT--EF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 189 ~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~--~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
....+++++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+.+ ..-. .+ .|..+ ...+.+.+.+...
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 83 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVER 83 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34457899999998 9999999999999999 89999998776655443 2211 22 23331 2233333333221
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+||.+.|.
T Consensus 84 ~~~~d~vi~~ag~ 96 (264)
T PRK12829 84 FGGLDVLVNNAGI 96 (264)
T ss_pred hCCCCEEEECCCC
Confidence 378999998875
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.023 Score=50.35 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=52.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.+++++||+|+ |.+|..++..+...|+ +++++++++++.+.+ ++.+... ++ |..+ ..++.+.+.+...
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 35789999998 9999999999999999 888888887755433 2233322 22 3331 2223333332221
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 478999999875
No 194
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.66 E-value=0.013 Score=54.42 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE----EeCCCCCCchHHHHHHHHhCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~----vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.+ .+... ..|..++..+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5899999998 9999999988888899 89999999887654422 22111 234432123334445444444
Q ss_pred -CccEEEeccCC
Q 017052 263 -GADYSFECIGD 273 (378)
Q Consensus 263 -~~d~vid~~g~ 273 (378)
.+|+++++.|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 67799988763
No 195
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.64 E-value=0.0077 Score=54.08 Aligned_cols=78 Identities=21% Similarity=0.255 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCcE-E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+++. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999998 9999999999999999 899998888776666543 3211 1 23331 2233333443322 3789
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
+++.+.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
No 196
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.011 Score=53.30 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +.++.... .|..+ ..++.+.+..... +++|+
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999998888899 788888988876544 34442222 24432 2333333433322 47899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
++.+.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9998873
No 197
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.014 Score=52.40 Aligned_cols=81 Identities=20% Similarity=0.318 Sum_probs=53.6
Q ss_pred CCCCCeEEEEcc-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcEE--e--CCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF--L--NPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~v--i--~~~~~~~~~~~~i~~~ 259 (378)
+.+++++||+|+ | ++|.++++.+...|+ +|+.+++++++.+...+ ++...+ + |..+ ..+....+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 446789999987 6 799999999999999 79888888776544322 443332 2 3331 22333333332
Q ss_pred h--CCCccEEEeccCC
Q 017052 260 T--DGGADYSFECIGD 273 (378)
Q Consensus 260 ~--~~~~d~vid~~g~ 273 (378)
. .+++|++|.+.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 2 2478999999984
No 198
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.61 E-value=0.006 Score=50.97 Aligned_cols=102 Identities=22% Similarity=0.253 Sum_probs=65.4
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC-CCCC--------------CchHHHHHHH
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDN--------------NEPVQQVIKR 258 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~-~~~~--------------~~~~~~~i~~ 258 (378)
..+|+|+|+|.+|+.|+++|+.+|+ +++..+...++.+.++..+...+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 9999999999999888887755332 1110 1122222322
Q ss_pred HhCCCccEEEeccC--C---hH-HHHHHHHHhccCCccEEEeccCC
Q 017052 259 ITDGGADYSFECIG--D---TG-MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 259 ~~~~~~d~vid~~g--~---~~-~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
... .+|++|.+.= + +. ..++.++.|+++ ..++++....
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 211 4688885321 1 11 234667888885 7777776543
No 199
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.61 E-value=0.0078 Score=54.06 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCc-EEe--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~-~vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++.. ..+ |..+ ..+..+.+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 9999999999999999 89999998887766544 3321 122 3321 233333444332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 200
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.60 E-value=0.014 Score=51.89 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
.++++||+|+ |++|..++..+...|+ +|+.++++.. ..+.+++++... . .|..+ ..++...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999998 9999999999999999 8998887652 233444455322 2 23331 3334434443322 378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 201
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.60 E-value=0.019 Score=47.82 Aligned_cols=97 Identities=19% Similarity=0.291 Sum_probs=62.4
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEEccCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~-vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
...|+...++...+.+...--.|++|||+|+|. +|..++..++..|+ +|+.+.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 444544444444443343446899999999986 69999999999999 7887766521
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.+. .+|+||.+++.+..+.. ..+.++ -.+++++...
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 2222232 57999999998653332 245654 5666776543
No 202
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.012 Score=53.00 Aligned_cols=79 Identities=14% Similarity=0.231 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EE--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EF--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+ ...+.+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 8999999999988999 89999998876554322 2322 12 34331 2233333333322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 203
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.016 Score=50.61 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=53.6
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.++..+... ..|..+ ..++...+..+..+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 57899988 9999999998888899 8999999988877777665432 234432 233333333333337899998876
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 4
No 204
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.0088 Score=54.24 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE----EeCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE----FLNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~----vi~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+..... ..|..+ ...+.+.+..... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3678999998 9999999999988999 8999999988877665532221 123331 2233333333222 3689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 205
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.59 E-value=0.02 Score=52.14 Aligned_cols=44 Identities=25% Similarity=0.372 Sum_probs=38.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
..+++|+|+|+|++|.+++..+...|+.+++.+.++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35689999999999999999999999988999999988877654
No 206
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.58 E-value=0.033 Score=48.35 Aligned_cols=105 Identities=18% Similarity=0.206 Sum_probs=63.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh------h-------------hHHH----HHhCCCcE-EeCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP------E-------------KCEK----AKAFGVTE-FLNPNDN 248 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~------~-------------~~~~----l~~~g~~~-vi~~~~~ 248 (378)
+..+|+|.|.|++|.+++..+...|..++..++-++ . |.+. .+..++.- +.-.+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-- 106 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-- 106 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH--
Confidence 456899999999999999999999998888776543 1 1111 12222221 21111
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.-..+.+.++...++|+|+||...-..-..++..+.++.-.++..+...+
T Consensus 107 ~f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 107 DFITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 111223455555569999999998644434444534333366777765554
No 207
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.015 Score=53.34 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+. +.+... .+ |..+ ..++.+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999988899 8999999887755443 233322 22 3331 233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 208
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.57 E-value=0.0098 Score=52.83 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCC--Cc-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG--VT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g--~~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. .+. .. ..+ |.. +..++...+.... .++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVS-DEADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999999988999 7999999987765442 222 11 122 332 1233433333321 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+||.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 209
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.56 E-value=0.057 Score=46.50 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=65.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-h-HHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-K-CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~-~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
.|++|||+|+|.+|...+..+...|+ .|+++..+.. . .+++.. +.-.... . .+... .-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~~~-~----~~~~~----~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRWKQ-K----EFEPS----DIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEEEe-c----CCChh----hcCCceEEEEc
Confidence 67899999999999999998888998 8888865421 1 222222 2111111 1 11000 01268999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
++.++.-....... .. +.+++..+.+...++-++...-..++++
T Consensus 78 T~d~elN~~i~~~a-~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~i 121 (202)
T PRK06718 78 TNDPRVNEQVKEDL-PE-NALFNVITDAESGNVVFPSALHRGKLTI 121 (202)
T ss_pred CCCHHHHHHHHHHH-Hh-CCcEEECCCCccCeEEEeeEEEcCCeEE
Confidence 99865544444444 44 6777776655545555555442224443
No 210
>PRK06128 oxidoreductase; Provisional
Probab=96.54 E-value=0.027 Score=51.70 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=49.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHhCCCcEE---eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--K----CEKAKAFGVTEF---LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~----~~~l~~~g~~~v---i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.+++..+...|+ +|+.+.++.+ + .+.+++.+.... .|..+ ..+..+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999988999 7777655432 1 223344454332 23331 223333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2378999998873
No 211
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.52 E-value=0.0098 Score=53.73 Aligned_cols=45 Identities=31% Similarity=0.426 Sum_probs=40.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
.+|+++||.|||+.+.+++.-++..|+++++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 358999999999999999999999998799999999998776655
No 212
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.016 Score=52.19 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CCcE-E--eCCCCCCchHHHHHHHHh-CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-F--LNPNDNNEPVQQVIKRIT-DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~~~-v--i~~~~~~~~~~~~i~~~~-~~ 262 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+.+ + +... . .|..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 5789999998 8999999999999999 89999998877554332 1 3221 2 23331 233333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 78999998874
No 213
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.51 E-value=0.034 Score=48.16 Aligned_cols=104 Identities=24% Similarity=0.293 Sum_probs=71.5
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.++....++||=+|.+ +|..++++|..+. -.+++.+++++++.+.+++ .|.+..+..-- ..+..+.+.+...+
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~gdal~~l~~~~~~ 131 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-GGDALDVLSRLLDG 131 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-cCcHHHHHHhccCC
Confidence 4556688889888863 4788888888775 3289999999999877765 67665322210 12455555553345
Q ss_pred CccEEE-eccC--ChHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSF-ECIG--DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.||+|| |+-- .+..++.++++++++ |-++.-
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D 165 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD 165 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence 899988 5543 256789999999996 776654
No 214
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.49 E-value=0.037 Score=47.35 Aligned_cols=76 Identities=29% Similarity=0.370 Sum_probs=50.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CCcEE-eCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTEF-LNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~~~v-i~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.++++++|+|+ |.+|+.++..+...|. +|+.+.++.++.+.+.+ + +.... .+.. +..++.+.+ .+.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~-----~~~ 98 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETS-DDAARAAAI-----KGA 98 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC-CHHHHHHHH-----hcC
Confidence 36789999997 9999999988888888 89999898887655433 2 22221 1221 112222222 268
Q ss_pred cEEEeccCCh
Q 017052 265 DYSFECIGDT 274 (378)
Q Consensus 265 d~vid~~g~~ 274 (378)
|+||.++..+
T Consensus 99 diVi~at~~g 108 (194)
T cd01078 99 DVVFAAGAAG 108 (194)
T ss_pred CEEEECCCCC
Confidence 9999988764
No 215
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.48 E-value=0.019 Score=56.57 Aligned_cols=74 Identities=22% Similarity=0.260 Sum_probs=55.3
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+.+|++|+|+|.|..|++++++++..|+ +|++.+.++.+.+.++++|+..+ ... ...+.+. .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~----~~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STS----DAVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCc----chHhHhh-----cCCEEEE
Confidence 35678999999999999999999999999 89999987777766777887443 221 1111221 4799998
Q ss_pred ccCCh
Q 017052 270 CIGDT 274 (378)
Q Consensus 270 ~~g~~ 274 (378)
+.|-+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88764
No 216
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.48 E-value=0.044 Score=48.08 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=61.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHhCCCcEEeCCCCCCchHHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTN----PEK--------CEKAKAFGVTEFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~--~vi~v~~~----~~~--------~~~l~~~g~~~vi~~~~~~~~~~~~i~ 257 (378)
-.+++|+|+|+|+.|..++..+...|++ +++.++++ .++ .++++.++... . ..++.+.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence 4678999999999999999999999997 89999998 343 33445443211 1 113333332
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
++|++|++++..-.-...++.|.++ ..++.+.
T Consensus 97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 4799999987322224566777765 5555544
No 217
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.017 Score=51.17 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999999999999 899998887665433 4455432 2 23321 222322223222 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 218
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.46 E-value=0.042 Score=47.36 Aligned_cols=102 Identities=16% Similarity=0.224 Sum_probs=59.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKC----EKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~----~~l~~~g~~~vi~~~~~~ 249 (378)
.+.+|+|+|+|++|..+++.+..+|..+++.++.+. .|. +.++++.....+...+..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 457899999999999999999999998899998762 222 233334432222111001
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. +.+.++. .++|+||+|+++.......-+.+....-.++..+.
T Consensus 100 i~~-~~~~~~~-~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~~ 144 (202)
T TIGR02356 100 VTA-ENLELLI-NNVDLVLDCTDNFATRYLINDACVALGTPLISAAV 144 (202)
T ss_pred CCH-HHHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 111 1122221 26899999998865544444444443133555443
No 219
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.45 E-value=0.041 Score=45.29 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=60.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|||+|+|.+|.--++.+...|+ .|+++. ++..+.+++++.-... .+ .+. ...-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~----~~~----~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QK----TFS----NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ec----ccC----hhcCCCceEEEECCC
Confidence 68899999999999999999988999 788773 4433444455422221 11 111 001127899999988
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 308 (378)
..+ .+..+...++. +.++...+.....++.++..
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~~d~~~~~~f~~pa~ 113 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNVVSDGTESSFHTPGV 113 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEECCCCCcCcEEeeeE
Confidence 754 45544444444 44555444333344544433
No 220
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.017 Score=51.56 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHhCCCcc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.. .+... + .|.. +. +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT--DA---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC--CH---HHHHHHhcCCCC
Confidence 468999998 9999999999999999 89999888776554432 23221 2 2332 21 223333334799
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
++|.+.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
No 221
>PRK06484 short chain dehydrogenase; Validated
Probab=96.42 E-value=0.034 Score=55.31 Aligned_cols=80 Identities=24% Similarity=0.301 Sum_probs=55.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE---EeCCCCCCchHHHHHHHHhC--CCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE---FLNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
..|+++||+|+ +++|..+++.+...|+ +|+.++++.++.+.+.+ ++... ..|..+ ..+..+.+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35789999988 9999999999999999 89999998887765544 44332 224331 2333333443322 478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|.+.|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999998874
No 222
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.38 E-value=0.016 Score=48.09 Aligned_cols=96 Identities=17% Similarity=0.233 Sum_probs=61.9
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|.|+|| |-+|..+++=|+..|. +|+++++++.|....+.. .++.-+ -.+... +.+. -.++|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~D--ifd~~~-~a~~-l~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKD--IFDLTS-LASD-LAGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeeccc--ccChhh-hHhh-hcCCceEEEeccCC
Confidence 5788998 9999999999999999 999999999988664322 111111 111111 1110 12899999998864
Q ss_pred --H-------HHHHHHHHhcc-CCccEEEeccCCC
Q 017052 275 --G-------MITTALQSCCD-GWGLAVTLGVPKL 299 (378)
Q Consensus 275 --~-------~~~~~~~~l~~-~~G~~v~~g~~~~ 299 (378)
+ ..+.++..++. +-.|+..+|...+
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 1 23345666665 2357888876543
No 223
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.36 E-value=0.018 Score=52.46 Aligned_cols=126 Identities=17% Similarity=0.228 Sum_probs=68.0
Q ss_pred CCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 156 SGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 156 ~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
...++.|...+.|-.. ...|...+|..... ..+|++||=+|.|. |.+++..+ .+|+++|++++.++...+.+
T Consensus 128 ~~~~I~idPg~AFGTG-----~H~TT~lcl~~l~~~~~~g~~vLDvG~GS-GILaiaA~-klGA~~v~a~DiDp~Av~~a 200 (295)
T PF06325_consen 128 DEIVIEIDPGMAFGTG-----HHPTTRLCLELLEKYVKPGKRVLDVGCGS-GILAIAAA-KLGAKKVVAIDIDPLAVEAA 200 (295)
T ss_dssp TSEEEEESTTSSS-SS-----HCHHHHHHHHHHHHHSSTTSEEEEES-TT-SHHHHHHH-HTTBSEEEEEESSCHHHHHH
T ss_pred CcEEEEECCCCcccCC-----CCHHHHHHHHHHHHhccCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEecCCHHHHHHH
Confidence 3455666665543322 22233333322221 67889999998632 44343333 35888999999999876655
Q ss_pred Hh----CCCcE-E-eCCCCCCchHHHHHHHHhCCCccEEEeccCChH---HHHHHHHHhccCCccEEEeccCCC
Q 017052 235 KA----FGVTE-F-LNPNDNNEPVQQVIKRITDGGADYSFECIGDTG---MITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 235 ~~----~g~~~-v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+. -|... + +... .+. ..+.||+|+-.+-.+. .......+++++ |+++..|....
T Consensus 201 ~~N~~~N~~~~~~~v~~~---~~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~ 263 (295)
T PF06325_consen 201 RENAELNGVEDRIEVSLS---EDL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILEE 263 (295)
T ss_dssp HHHHHHTT-TTCEEESCT---SCT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred HHHHHHcCCCeeEEEEEe---ccc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence 43 23222 2 2111 111 1148999996655432 233445578887 99999887654
No 224
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.02 Score=51.09 Aligned_cols=79 Identities=22% Similarity=0.262 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE---EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~---vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.++.++.+.+.+ .+... ..|..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999998 9999999999999999 89999888776654432 23222 223331 233333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 225
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.34 E-value=0.0077 Score=46.27 Aligned_cols=93 Identities=24% Similarity=0.213 Sum_probs=60.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhC----CC-cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAF----GV-TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~----g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
|+++||-+|+|. |..++.+++. .++ ++++++.+++..+.+++. +. +.+.-.. .++ . ......+++|+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~-~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-E-FDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-H-GGTTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-c-cCcccCCCCCE
Confidence 688999999864 8888888884 677 999999999988877652 22 2221111 111 0 11111227999
Q ss_pred EEecc-CCh---------HHHHHHHHHhccCCccEEE
Q 017052 267 SFECI-GDT---------GMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 267 vid~~-g~~---------~~~~~~~~~l~~~~G~~v~ 293 (378)
|+... ... ..++.+.+.|+++ |+++.
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 99765 221 2367788899997 98875
No 226
>PLN02366 spermidine synthase
Probab=96.34 E-value=0.035 Score=51.05 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=64.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc--------EEeCCCCCCchHHHHHHHHhCC
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--------EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~--------~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
....++|||+|+|. |..+..++++-+..+|++++.+++-.+.++++-.. ++-.. ..+..+.+++...+
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~~~~ 164 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNAPEG 164 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhccCC
Confidence 35578999998865 55677888887766899999999888888774211 11000 12333344443334
Q ss_pred CccEEE-eccC---------ChHHHHHHHHHhccCCccEEEec
Q 017052 263 GADYSF-ECIG---------DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 263 ~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+|+|| |+.. +.+.++.+.++|+++ |.++.-+
T Consensus 165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 799877 4432 124577888999997 9987643
No 227
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.019 Score=51.23 Aligned_cols=78 Identities=26% Similarity=0.296 Sum_probs=51.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |.. +...+.+.+.+.. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR-NPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHhCC
Confidence 578999988 9999999999999999 89999888776554432 2322 223 332 1233333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 228
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.34 E-value=0.023 Score=50.49 Aligned_cols=78 Identities=29% Similarity=0.385 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE---EeCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |++|+.+++.+...|+ +|+.++++.++.+.+ +..+... ..|..+ ..++.+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999998999 899998887665433 2234332 223321 2233333333322 3
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 229
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.028 Score=50.31 Aligned_cols=81 Identities=19% Similarity=0.336 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhh-HH----HHHhCCCc--EEe--CCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEK-CE----KAKAFGVT--EFL--NPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~-~~----~l~~~g~~--~vi--~~~~~~~~~~~~i~~~ 259 (378)
+..+++|||+|+ |++|.++++-+... |+ +|+.+++++++ .+ .++..+.. +++ |.. +..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDAL-DTDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCC-ChHHHHHHHHHH
Confidence 567789999998 99999999876666 47 88888887764 33 23333431 222 332 123333334443
Q ss_pred hC-CCccEEEeccCC
Q 017052 260 TD-GGADYSFECIGD 273 (378)
Q Consensus 260 ~~-~~~d~vid~~g~ 273 (378)
.. +++|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 32 479998887764
No 230
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.33 E-value=0.0092 Score=58.27 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=60.6
Q ss_pred hhcCCCCCCeEE----EEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVV----IFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VL----I~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~ 260 (378)
...+.++|+++| |+|+ |++|.+++|+++..|+ +|+++.+...+....+..+... +++.+ ...+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDAT--GITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECC--CCCCHHHHHHHH
Confidence 346678888888 8876 9999999999999999 8999877666544444445443 44443 222222332211
Q ss_pred CCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..+...++.+.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 3445566677765 7777776543
No 231
>PRK06196 oxidoreductase; Provisional
Probab=96.33 E-value=0.024 Score=52.55 Aligned_cols=79 Identities=24% Similarity=0.337 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
.+++|||+|+ |++|.+++..+...|+ +|+.++++.++.+.+ +.+..-.. .|..+ ..+..+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 5789999998 9999999998888999 899998988765443 23321122 23331 2233333443322 47899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 232
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.32 E-value=0.0094 Score=53.85 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=61.3
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~ 258 (378)
+.+++++++|++||-+|+| -|..++.+|+..|+ +|++++.++++.+.+++ .|... .+... ++ ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~----D~----~~ 123 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ----DY----RD 123 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----GG
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe----ec----cc
Confidence 4588899999999999987 57778889998899 99999999999887754 55422 11111 11 11
Q ss_pred HhCCCccEEEe-----ccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 259 ITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 259 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+. +.+|.|+. .+|. +..+..+.+.|+|+ |+++.-.
T Consensus 124 ~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 124 LP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred cC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 11 27887764 3442 34577888899997 9987543
No 233
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.32 E-value=0.022 Score=51.56 Aligned_cols=79 Identities=22% Similarity=0.343 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhCCCcEEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ + ++|.++++.+...|+ +|+.+.++++..+ ..+++|....+ |..+ ..+..+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 5789999998 4 899999999999999 8888877653322 22334543322 3331 2333333443322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 478999998873
No 234
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.30 E-value=0.091 Score=47.18 Aligned_cols=105 Identities=17% Similarity=0.198 Sum_probs=62.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-------------------h----HHHHHhCCCcE-EeCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------K----CEKAKAFGVTE-FLNPNDN 248 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-------------------~----~~~l~~~g~~~-vi~~~~~ 248 (378)
.+.+|+|.|.|++|..++..+...|..+++.++.+.- | .+.+++++... +..+++
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~- 107 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD- 107 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec-
Confidence 5678999999999999999999999878888876521 1 12223343322 221211
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
.-. .+.+.++....+|+||||++....-..+.+.+....-.++..+...+
T Consensus 108 ~i~-~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~ 157 (268)
T PRK15116 108 FIT-PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG 157 (268)
T ss_pred ccC-hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence 000 11223333337999999999754444444554443255676665544
No 235
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.30 E-value=0.021 Score=50.91 Aligned_cols=79 Identities=20% Similarity=0.302 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhCCCcE---EeCCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~~l~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+++++||+|+ +++|.++++.+...|+ +|+.+.++... .+.++..+... ..|..+ ..+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 9999999999999999 88888765422 23344455432 224432 333444444332 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 236
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.025 Score=50.24 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=50.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCc-E--EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-E--FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~-~--vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. ..+.. . ..|..+ ..++.....+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 5688999998 9999999999888998 8999988876543332 12221 2 223331 223333333322 13
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 237
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.29 E-value=0.025 Score=50.69 Aligned_cols=78 Identities=21% Similarity=0.356 Sum_probs=49.8
Q ss_pred CCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhCCCcEEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++..+ ..++++....+ |.. +..+..+.+.....
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVR-EPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcC-CHHHHHHHHHHHHHHc
Confidence 57899999873 899999999988999 7888878754332 22334432333 332 12333333333322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+.+|+++++.|
T Consensus 87 g~ld~lv~nAg 97 (258)
T PRK07533 87 GRLDFLLHSIA 97 (258)
T ss_pred CCCCEEEEcCc
Confidence 47899998876
No 238
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.28 E-value=0.04 Score=50.06 Aligned_cols=44 Identities=25% Similarity=0.342 Sum_probs=38.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
..++++||+|+|+.+++++..+...|+++++.+.++.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 35789999999999999999888899989999999988876664
No 239
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.28 E-value=0.026 Score=50.36 Aligned_cols=79 Identities=25% Similarity=0.390 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..|... .+ |..+ ..++.+.+.... .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999998888899 899998887665432 2233222 22 3331 333433343332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 240
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.28 E-value=0.025 Score=49.87 Aligned_cols=79 Identities=25% Similarity=0.396 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
++++|||+|+ |.+|..+++.+...|. +|+.+.+++++.+.+ +..+... . .|..+ ...+...+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4578999998 9999999999888899 799999988764433 3334322 2 23331 2334444443322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|.++.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
No 241
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.28 E-value=0.024 Score=50.68 Aligned_cols=79 Identities=20% Similarity=0.275 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+.+++++.+.+ ++.+... .+ |..+ ...+.+.+.... .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 888888888654332 3344432 22 3321 222333333221 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 242
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.27 E-value=0.052 Score=47.18 Aligned_cols=101 Identities=21% Similarity=0.328 Sum_probs=66.5
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~ 257 (378)
+....+++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++ .|... ++..+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 34667789999999998853 6667777777653 289999999987766654 45432 222210 0011
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
...++||+|+-...........++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01237999875544445667788899997 998764
No 243
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.025 Score=50.38 Aligned_cols=79 Identities=20% Similarity=0.373 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++.+.+.... .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4789999998 9999999998888899 899999987764432 3334322 2 23321 223333333321 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 244
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.021 Score=51.25 Aligned_cols=79 Identities=22% Similarity=0.267 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE----EeCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~----vi~~~~~~~~~~~~i~~~~-- 260 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ .+... ..|..+ ..+..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 5789999998 9999999999999999 89999998876544321 21112 124431 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2478999999874
No 245
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.031 Score=50.17 Aligned_cols=79 Identities=27% Similarity=0.385 Sum_probs=51.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C--CCc-EEe--CCCCCCchHHHHHHHHh-CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT-DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~--g~~-~vi--~~~~~~~~~~~~i~~~~-~~~~ 264 (378)
+++++||+|+ |++|..++..+...|+ +|+++++++++.+.+.. + +.. ..+ |.. +..+..+.+.... .+++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLT-SEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCC-CHHHHHHHHHHHHhcCCC
Confidence 4678999988 9999999999988999 89999998877654432 2 211 122 332 1222222222221 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998874
No 246
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.026 Score=51.16 Aligned_cols=79 Identities=25% Similarity=0.279 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.+++..+...|+ +|+.++++.++.+.+ +..+... . .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 888888887665433 2234322 2 23331 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 78999998873
No 247
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.24 E-value=0.041 Score=49.72 Aligned_cols=95 Identities=20% Similarity=0.364 Sum_probs=65.6
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEccCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag~-vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+..| +..++ -.|++|+|+|.|. +|.-++.++...|+ +|+.+.+.. .
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~ 193 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------K 193 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------h
Confidence 4565544444433 55553 4799999999955 99999999999999 888775431 1
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+||.++|.+..+.. ..++++ ..++++|...
T Consensus 194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 2222333 57999999998765554 347775 7788887654
No 248
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.24 E-value=0.019 Score=51.62 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=72.1
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC--
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-- 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g-- 272 (378)
.+|.|+|+|.+|.-++.+|..+|+ .|+..+.|.+|+..++.+-..++....++...+.+.+. +.|++|..+=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLIp 242 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLIP 242 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEec
Confidence 457788999999999999999999 99999999999999988654443322222445555554 5788887652
Q ss_pred C---h-HHHHHHHHHhccCCccEEEeccCCC
Q 017052 273 D---T-GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 273 ~---~-~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+ | -..++..+.|.++ +.++++....+
T Consensus 243 gakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred CCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 1 1 2366789999997 99998875544
No 249
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.031 Score=50.02 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=51.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCC--c-EE--eCCCCCCchHHHHHHHHhC--CCc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~--~-~v--i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
+++|||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+ +.. . .. .|..+ ..++.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999988 9999999999988899 89999998877654433 321 1 12 23331 2344444444322 368
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998773
No 250
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.23 E-value=0.043 Score=50.67 Aligned_cols=91 Identities=21% Similarity=0.428 Sum_probs=60.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
.+|.|+|+|.+|.+++..++..|. .+|+++++++++.+.+++.|....... +..+.+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-----~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-----SAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-----CHHHHh-----cCCCEEEECCCH
Confidence 579999999999999999888874 379999999999888888875322111 111112 257999999875
Q ss_pred hHH---HHHHHHHhccCCccEEEecc
Q 017052 274 TGM---ITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 274 ~~~---~~~~~~~l~~~~G~~v~~g~ 296 (378)
... +......++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 322 23333455554 55666554
No 251
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.22 E-value=0.02 Score=51.15 Aligned_cols=78 Identities=21% Similarity=0.319 Sum_probs=51.6
Q ss_pred CCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.|+++||+|++ ++|.++++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899999999988999 8888888755455555543221 2 23331 233333333332 247
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|+++++.|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999877
No 252
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.22 E-value=0.037 Score=48.73 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=51.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhCCCcE-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
++++||+|+ +++|..+++.+...|+ +|+.+++++++ .+.++..+... ..|..+ ..+..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999998 9999999999988999 88888887643 34445555432 223331 3344444444332 3689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 253
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.031 Score=49.90 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.+ +++..+.++..+... ..|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999988 9999999999988999 6766644 444444454444322 224431 333444444332 2378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 254
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.20 E-value=0.022 Score=51.00 Aligned_cols=79 Identities=27% Similarity=0.278 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE---EeCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE---FLNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~---vi~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ |++|.++++.+...|+ +|+.+++++...+..++ .+.+. ..|..+ ..+..+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4789999988 9999999999989999 89988887644333333 34332 234431 233333444332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++.+.|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 8999998873
No 255
>PRK00811 spermidine synthase; Provisional
Probab=96.19 E-value=0.029 Score=51.06 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=62.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC---------cEEeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV---------TEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~---------~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. +++-.. ..+..+.+.. ..+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l~~-~~~ 149 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFVAE-TEN 149 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHHhh-CCC
Confidence 4568999998864 6667777787677699999999998888876311 111100 1122333333 334
Q ss_pred CccEEEe-ccCC---------hHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFE-CIGD---------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|+|+- .... .+.++.+.+.|+++ |.++.-
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 8999884 3211 23456778899997 998864
No 256
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.027 Score=50.27 Aligned_cols=79 Identities=20% Similarity=0.309 Sum_probs=52.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ +..+... .+ |..+ ..+..+.+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999998 9999999999988999 899998888766543 2234322 22 3331 223333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 257
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.19 E-value=0.071 Score=46.87 Aligned_cols=104 Identities=15% Similarity=0.214 Sum_probs=61.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-------------------h----HHHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------K----CEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-------------------~----~~~l~~~g~~~vi~~~~~~ 249 (378)
...+|+|.|.|++|..++..+...|..+++.++.+.- | .+.+++++...-+... .
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~--~ 87 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV--E 87 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe--e
Confidence 3468999999999999999999999988888876531 1 1222334432222111 1
Q ss_pred chH-HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 250 EPV-QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 250 ~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..+ .+...++...++|+|+||+.....-..+.+.+....-.++..+...
T Consensus 88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~g 137 (231)
T cd00755 88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGAG 137 (231)
T ss_pred eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence 111 1223333334799999999886554445555544424566554433
No 258
>PRK00536 speE spermidine synthase; Provisional
Probab=96.18 E-value=0.019 Score=51.26 Aligned_cols=101 Identities=12% Similarity=-0.072 Sum_probs=66.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEE-ec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF-EC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi-d~ 270 (378)
..-++|||+|+|- |.++-.++|+- . +|+.++.+++-.+.++++-....-.+++....+...+.+...+.+|+|| |+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 4558999997754 45566788875 2 8999999999999998842211001111122222233333334799866 76
Q ss_pred cCChHHHHHHHHHhccCCccEEEecc
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.-.++..+.+.++|+++ |.++.-+.
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 66667778899999997 99887644
No 259
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.18 E-value=0.016 Score=52.67 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=51.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++++|||+|+|+.|++++..+..+|+++++.+.|+.+|.+.+.+ ++... +.... . + +.+... ...+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~--~--~-~~~~~~-~~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE--G--D-SGGLAI-EKAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc--c--h-hhhhhc-ccCCCEEEEC
Confidence 57899999999999999999999999889999999888766543 33211 11111 0 0 111111 1268999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 260
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.17 E-value=0.029 Score=50.33 Aligned_cols=79 Identities=19% Similarity=0.322 Sum_probs=49.8
Q ss_pred CCCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEE--eCCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
-.|+++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.++ +.+.... .|..+ ..+..+.+.+...
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~ 83 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEK 83 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHH
Confidence 35789999988 4 799999988888899 7888777643222232 2343332 34432 3344444443322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+.+|+++++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 47899998876
No 261
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.033 Score=49.65 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=52.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-E--EeCCCCCCchHHHHHHHHhC--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-E--FLNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~--vi~~~~~~~~~~~~i~~~~~-- 261 (378)
.+++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+ .+.. . ..|.. +..++...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDIT-DEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCC-CHHHHHHHHHHHHHHc
Confidence 35789999988 9999999999999999 89999888876544432 2322 1 22333 12334333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 368999998864
No 262
>PRK06194 hypothetical protein; Provisional
Probab=96.16 E-value=0.027 Score=51.27 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---CCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~---~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++ .+... ++ |..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999988 9999999999888999 899998876654333 22 23322 12 3321 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999875
No 263
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.15 E-value=0.038 Score=47.77 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=64.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hCCCc---EEeCCCCCCchHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~----~~g~~---~vi~~~~~~~~~~~~i~ 257 (378)
.+...++++++||-+|+|. |..++.+++..+ ..+|++++.+++-.+.++ ..+.. .++..+ ..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~~ 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGLE 138 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCCc
Confidence 4666788999999998853 667777777664 228999999988666554 34542 222221 111110
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||+|+-+.........+++.|+++ |+++..
T Consensus 139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999886655445566788899997 998763
No 264
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.15 E-value=0.11 Score=44.48 Aligned_cols=104 Identities=16% Similarity=0.203 Sum_probs=61.5
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
....+++++++||=.|+|. |..++.+++.....+|++++.+++..+.+++ ++...+.... .+..+.+..+.
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC-
Confidence 3556778899988887742 4455566665432399999999988776654 5543321111 11222222221
Q ss_pred CCccE-EEeccCC-hHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADY-SFECIGD-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~-vid~~g~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+|. +++.... ...+..+.+.|+++ |+++...
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 142 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATA 142 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 22344 4443222 35678888899997 9988774
No 265
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.032 Score=49.99 Aligned_cols=78 Identities=21% Similarity=0.328 Sum_probs=51.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHhC--CC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~~ 263 (378)
++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... ++ |.. +...+...+..... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVS-DAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence 367999998 9999999999989998 899999987664433 2233322 22 332 12333333443322 36
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 266
>PRK14967 putative methyltransferase; Provisional
Probab=96.14 E-value=0.27 Score=43.00 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=62.2
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~~ 261 (378)
....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++ .+... +++. ++.+. +..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~---~~~ 99 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARA---VEF 99 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhh---ccC
Confidence 344578889999999976 8888888875 55589999999988775544 34322 2221 22221 122
Q ss_pred CCccEEEeccC--------------------C-------hHHHHHHHHHhccCCccEEEe
Q 017052 262 GGADYSFECIG--------------------D-------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 262 ~~~d~vid~~g--------------------~-------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+.||+|+-... + ...+..+.+.|+++ |+++.+
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 37999885311 0 11345667888887 998765
No 267
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.034 Score=49.80 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC-----CCc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~-----g~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++ +.. .. .|..+ ..++...+....
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 8999988877655432 22 221 12 23331 233333343332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2378999998873
No 268
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.13 E-value=0.022 Score=51.09 Aligned_cols=80 Identities=23% Similarity=0.322 Sum_probs=54.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHhCCCc--EEeCCCCCCchHHHHHHHHhC--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK----CEKAKAFGVT--EFLNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~----~~~l~~~g~~--~vi~~~~~~~~~~~~i~~~~~--~ 262 (378)
-.|+.|||+|+ +++|++.++=...+|+ +++..+.+++. .+.+++.|-. .+.|.++ .++.....++... |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 36999999988 8999999988888898 88888887654 3344445522 2455553 3444444443333 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 78999998873
No 269
>PRK08589 short chain dehydrogenase; Validated
Probab=96.13 E-value=0.03 Score=50.62 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE---EeCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE---FLNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~---vi~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ +++|.++++.+...|+ +|+.++++++..+.+++ .+... ..|..+ ..+....+.+.. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 89999888433333333 23221 234331 233333344332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998864
No 270
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.12 E-value=0.0082 Score=51.90 Aligned_cols=104 Identities=23% Similarity=0.317 Sum_probs=65.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHH----HhCCCcEEe-CCCCCCchHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKA----KAFGVTEFL-NPNDNNEPVQQVIKR 258 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l----~~~g~~~vi-~~~~~~~~~~~~i~~ 258 (378)
+.+...+++|++||-+|+| .|..++-+|+..|.. .|++++++++-.+.+ +.++.+.+. ...+....+
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~------ 136 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW------ 136 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT------
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc------
Confidence 3467779999999999985 377777777776642 689999988755444 446665432 111101111
Q ss_pred HhCCCccEEEeccCChHHHHHHHHHhccCCccEEE-ecc
Q 017052 259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT-LGV 296 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~-~g~ 296 (378)
...++||.|+-+.+-+..-...++.|+++ |++|. ++.
T Consensus 137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 137 PEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp GGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred ccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 01238999998877766667888999997 99887 444
No 271
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.017 Score=52.00 Aligned_cols=77 Identities=21% Similarity=0.364 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+... +... ..|.. +..++.+.+.... .+++|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~-d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVT-DDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecC-CHHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999998 9999999998888899 8999988876554321 2222 22433 2334444444432 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
No 272
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.11 E-value=0.027 Score=50.86 Aligned_cols=81 Identities=17% Similarity=0.210 Sum_probs=54.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc------EEeCCCC--CCchHHHHHHH
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT------EFLNPND--NNEPVQQVIKR 258 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~------~vi~~~~--~~~~~~~~i~~ 258 (378)
-.|+.+||+|+ .++|.+++..+...|+ +|+.+.++.++.+..++ .+.. .+.|..+ +...+.+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46889999987 8999999999999999 89999999887654432 2332 1234431 11222223333
Q ss_pred HhCCCccEEEeccCC
Q 017052 259 ITDGGADYSFECIGD 273 (378)
Q Consensus 259 ~~~~~~d~vid~~g~ 273 (378)
...|++|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334589999988774
No 273
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.11 E-value=0.031 Score=51.81 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=60.8
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|||+|+ |.+|..+++.+...|. +|++++++.++...+...+...+. |..+ ...+ .+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~l----~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PETL----PPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHHH----HHHHC-CCCEEEECCCC
Confidence 6999998 9999999999988998 899999988776666555654432 3321 1222 22222 68999998753
Q ss_pred hH------------HHHHHHHHhccC-CccEEEeccC
Q 017052 274 TG------------MITTALQSCCDG-WGLAVTLGVP 297 (378)
Q Consensus 274 ~~------------~~~~~~~~l~~~-~G~~v~~g~~ 297 (378)
.. .....++.+... -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 10 112344444443 1478877664
No 274
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.045 Score=48.98 Aligned_cols=77 Identities=22% Similarity=0.230 Sum_probs=52.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC-Cc-E--EeCCCCCCchHHHHHHHHh---CCCcc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-VT-E--FLNPNDNNEPVQQVIKRIT---DGGAD 265 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g-~~-~--vi~~~~~~~~~~~~i~~~~---~~~~d 265 (378)
+++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.. ++ .. . ..|..+ ..++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999998 9999999998888999 89999998887665543 32 11 1 234431 233443343332 34789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999874
No 275
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.048 Score=48.12 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=52.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
..++++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+ .+... .+ |..+ ..++...+.....
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 35678999988 9999999999998999 89999998876544322 22221 22 3331 2333333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 276
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.10 E-value=0.067 Score=47.91 Aligned_cols=78 Identities=17% Similarity=0.363 Sum_probs=48.7
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HhC-CCc-EE--eCCCCCCchHHHHHHHHhC
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAF-GVT-EF--LNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~---~~~~~l-~~~-g~~-~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ +++ +.. .. .|..+ ..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 5789999987 4899999999888999 788876543 233323 333 221 12 24432 3344444444332
Q ss_pred --CCccEEEeccC
Q 017052 262 --GGADYSFECIG 272 (378)
Q Consensus 262 --~~~d~vid~~g 272 (378)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47899998876
No 277
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.024 Score=50.01 Aligned_cols=80 Identities=25% Similarity=0.289 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCC-c-E--EeCCCCC-CchH---HHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV-T-E--FLNPNDN-NEPV---QQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~-~-~--vi~~~~~-~~~~---~~~i~~~ 259 (378)
++++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+. +.+. . . ..|..+. ..++ .+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 5689999988 9999999999988999 8999999887665432 2221 1 1 1232211 1222 2233333
Q ss_pred hCCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGD 273 (378)
Q Consensus 260 ~~~~~d~vid~~g~ 273 (378)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999998884
No 278
>PRK09186 flagellin modification protein A; Provisional
Probab=96.08 E-value=0.04 Score=49.10 Aligned_cols=78 Identities=22% Similarity=0.425 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC----CCcE----EeCCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----GVTE----FLNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~----g~~~----vi~~~~~~~~~~~~i~~~~~- 261 (378)
++++|||+|+ |.+|..++..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+ ..++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 899998887765433 222 2221 224432 3334444444322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+++|+++.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
No 279
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.08 Score=48.39 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=50.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-H----HHHHhCCCcE-Ee--CCCCCCchHHHHHHHHh
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-C----EKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~----~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~ 260 (378)
...+++++||+|+ |.+|..++..+...|+ +|+.+.++.++ . +.++..+... ++ |..+ ...+.+.+.+..
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHH
Confidence 3445789999998 9999999998888899 78888776422 2 2223334322 22 3321 223333333322
Q ss_pred C--CCccEEEeccCC
Q 017052 261 D--GGADYSFECIGD 273 (378)
Q Consensus 261 ~--~~~d~vid~~g~ 273 (378)
. +++|++|.+.|.
T Consensus 120 ~~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 120 RELGRLDILVNNAAF 134 (290)
T ss_pred HHcCCCCEEEECCcc
Confidence 2 378999988774
No 280
>PRK09242 tropinone reductase; Provisional
Probab=96.08 E-value=0.035 Score=49.56 Aligned_cols=79 Identities=19% Similarity=0.256 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C--CCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~--g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ . +... . .|..+ ..+....+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 89999888876554432 1 2211 1 23331 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2478999999974
No 281
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.031 Score=50.01 Aligned_cols=81 Identities=23% Similarity=0.309 Sum_probs=52.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhCCCcE---EeCCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTE---FLNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~~g~~~---vi~~~~~~~~~~~~i~~~~--~ 261 (378)
..+++++|+|+ |.+|..+++.+...|+..|+.++++.++.+ .+++.+... ..|..+ ..++.+.+.... .
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 35789999998 999999999999999933999988876544 233344332 124331 223333333322 1
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 378999999874
No 282
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.035 Score=49.58 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=50.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HH---HHHhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CE---KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~---~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++ .+ .++..+... .+ |.. +..+..+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVT-SKADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 88888776432 22 223334322 22 332 1233443344332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
No 283
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.033 Score=49.44 Aligned_cols=79 Identities=22% Similarity=0.312 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C--CCc-EEe--CCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~--g~~-~vi--~~~~~~~~~~~~i~~~~~--~~ 263 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+.... + +.. ..+ |.. +..+..+.+..... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVG-SAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHcCC
Confidence 4679999988 9999999998888898 89999888765543322 2 221 222 332 12333333333322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 8999998884
No 284
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.06 E-value=0.051 Score=49.64 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=32.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
..++++||+|+|++|++++..+...|+++|+.+.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999999888899996699998885
No 285
>PRK05717 oxidoreductase; Validated
Probab=96.04 E-value=0.039 Score=49.24 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
.|+++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ +.++... . .|..+ ..+..+.+.++.. +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999999988998 888888776654433 4444322 2 23331 2233333333322 3689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 286
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.03 E-value=0.041 Score=49.24 Aligned_cols=79 Identities=23% Similarity=0.414 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+... . .|..+ ..++...+.++.. +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999988 9999999999988999 8999999887765443 223221 2 24331 2333333333222 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 287
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.04 Score=49.79 Aligned_cols=77 Identities=26% Similarity=0.306 Sum_probs=52.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCc-EE--eCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT-EF--LNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~-~v--i~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
+++||+|+ |.+|..+++.+...|. +|+++.++.++.+.+++. +.. .+ .|..+ ...+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999988 9999999998888899 899999988877665542 221 11 23331 233334443322 2378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 288
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.039 Score=49.84 Aligned_cols=78 Identities=26% Similarity=0.405 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---CC--Cc-EEe--CCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FG--VT-EFL--NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~---~g--~~-~vi--~~~~~~~~~~~~i~~~~~- 261 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+.. ++ .+ .. .++ |..+ ..++...+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999998 9999999999999999 899998887664432 22 21 11 222 3331 2333334443322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
No 289
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.02 E-value=0.033 Score=54.66 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=55.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhCCCcEEeCCCCCCch
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~---------------------~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
.+++|+|+|+|+.|+.++..++..|. .|+.++..+ ...+.++++|++..++..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 68899999999999999999999999 788887653 24567788998766554311 11
Q ss_pred HHHHHHHHhCCCccEEEeccCCh
Q 017052 252 VQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+ .+..+. .++|.||.++|..
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCC
Confidence 1 111211 2689999999974
No 290
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.00 E-value=0.038 Score=48.98 Aligned_cols=79 Identities=19% Similarity=0.256 Sum_probs=50.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
.+++|||+|+ |.+|..++..+...|+ +|++++++.++... ++..+... ++ |.. +..++.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVR-DRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888899 89999998654432 23333222 22 332 12333333333221 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998764
No 291
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.043 Score=49.54 Aligned_cols=77 Identities=22% Similarity=0.312 Sum_probs=49.8
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE----EeCCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE----FLNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~----vi~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+.. .++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCC
Confidence 36899988 9999999999988999 788888887664433 2233322 234431 223333233322 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 292
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.99 E-value=0.043 Score=44.86 Aligned_cols=74 Identities=26% Similarity=0.302 Sum_probs=50.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~-l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
..+++++|+|+|.+|..+++.+...|..++++++++.++.+. .++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 457899999999999999999888864489999998877654 44555421 01111 11111 137899999
Q ss_pred ccCCh
Q 017052 270 CIGDT 274 (378)
Q Consensus 270 ~~g~~ 274 (378)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98763
No 293
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.99 E-value=0.12 Score=46.49 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=74.8
Q ss_pred hHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE---Ee--CCCCCCch
Q 017052 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FL--NPNDNNEP 251 (378)
Q Consensus 181 a~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~---vi--~~~~~~~~ 251 (378)
++..+.+..++++|++||=+|+|- |.+++-+|+..|+ +|++++-|+++.+.+++ .|... ++ +++ +
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~r----d 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYR----D 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccc----c
Confidence 344466889999999999999864 7778899999999 99999999998877755 55541 11 222 1
Q ss_pred HHHHHHHHhCCCccEEE-----eccCC---hHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 252 VQQVIKRITDGGADYSF-----ECIGD---TGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vi-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
+. +.||-|+ +.+|. ++.+..+.+.|+++ |++++-......
T Consensus 134 ~~--------e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 FE--------EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred cc--------cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 1467665 33443 35677888899997 998877655543
No 294
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.043 Score=48.89 Aligned_cols=73 Identities=21% Similarity=0.363 Sum_probs=46.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++ +..+... .+....+ |.. +. +.+.+. -+++|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~--~~---~~~~~~-~~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECG--KE---ESLDKQ-LASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCC--CH---HHHHHh-cCCCCEEE
Confidence 4689999998 9999999999999999 888888876 2222211 1111222 332 11 122222 23689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
No 295
>PRK06720 hypothetical protein; Provisional
Probab=95.98 E-value=0.053 Score=45.30 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=50.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++++|+|+ +++|..++..+...|+ +|+.++++.+..+.. ++.+... .+ |.. +..++.+.+.+.. .+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDME-KQGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcC
Confidence 5789999988 8899999998888898 899988877654322 2234332 22 222 1223333332221 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 78999988774
No 296
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.98 E-value=0.047 Score=49.50 Aligned_cols=103 Identities=18% Similarity=0.275 Sum_probs=65.0
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ +++|+++++.+...|+ +|+.++++.+ +.+.+ ++++.... .|..+ ..+..+.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4789999987 4899999999988999 8888888753 22222 34453332 34432 233433444432 2
Q ss_pred CCccEEEeccCCh--------------H---------------HHHHHHHHhccCCccEEEeccCC
Q 017052 262 GGADYSFECIGDT--------------G---------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 262 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+.+|+++++.|.. + ..+..+..+.++ |+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 4789999988731 0 123445567765 8999887543
No 297
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.98 E-value=0.081 Score=47.99 Aligned_cols=130 Identities=19% Similarity=0.248 Sum_probs=73.1
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
..+++|...+.+ .......|++ +|.-. ..+++|++||=+|+|. |.++|. |..+|+.++++++.++...+.++
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~l-cL~~Le~~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSL-CLEALEKLLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHH-HHHHHHHhhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHH
Confidence 456667666633 2332333333 33222 2367999999998842 554444 34567778999999987665554
Q ss_pred h----CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC-h--HHHHHHHHHhccCCccEEEeccCCC
Q 017052 236 A----FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD-T--GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 236 ~----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~--~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
. -+.+..+... .+ ........+.+|+|+-.+=. + .+.......++++ |++++.|....
T Consensus 203 eNa~~N~v~~~~~~~----~~-~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~ 267 (300)
T COG2264 203 ENARLNGVELLVQAK----GF-LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILED 267 (300)
T ss_pred HHHHHcCCchhhhcc----cc-cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence 3 3443211110 00 01111122489998854321 1 2345667788997 99999986554
No 298
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.97 E-value=0.022 Score=47.13 Aligned_cols=78 Identities=26% Similarity=0.358 Sum_probs=50.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHH-H---HHhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN--PEKCE-K---AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~--~~~~~-~---l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++||+|+ +++|+.+++.+...|..+|+.+.++ .++.+ + ++..+... ++ |.. +..+....+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-DPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-SHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 47899998 9999999988888777688888888 34333 2 23345322 22 222 1334444444443 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 78999998885
No 299
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.97 E-value=0.064 Score=45.56 Aligned_cols=95 Identities=18% Similarity=0.200 Sum_probs=59.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++.+||-+|+|. |..++.+++.. +. +|++++.+++..+.+++ .+.+.+. +. ..+..+ +.. .+.+|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i~-~~--~~d~~~-~~~--~~~fD 114 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNVT-VV--HGRAEE-FGQ--EEKFD 114 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCEE-EE--eccHhh-CCC--CCCcc
Confidence 55689999998753 55555566544 45 99999999987766653 4544321 11 111111 111 23799
Q ss_pred EEEeccCC--hHHHHHHHHHhccCCccEEEe
Q 017052 266 YSFECIGD--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 266 ~vid~~g~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+|+-.... ...+..+.+.++++ |+++.+
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~ 144 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLAL 144 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 98853222 35677888999997 998877
No 300
>PRK07985 oxidoreductase; Provisional
Probab=95.97 E-value=0.1 Score=47.78 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=49.0
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH----HhCCCcE---EeCCCCCCchHHHHHHHHhC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l----~~~g~~~---vi~~~~~~~~~~~~i~~~~~ 261 (378)
-+++++||+|+ |++|.++++.+...|+ +|+.+.++. ++.+.+ +..+... ..|..+ ..+..+.+.+...
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 36789999998 9999999999999999 788776532 222222 2334322 223331 2333333443322
Q ss_pred --CCccEEEeccC
Q 017052 262 --GGADYSFECIG 272 (378)
Q Consensus 262 --~~~d~vid~~g 272 (378)
+++|+++.+.|
T Consensus 125 ~~g~id~lv~~Ag 137 (294)
T PRK07985 125 ALGGLDIMALVAG 137 (294)
T ss_pred HhCCCCEEEECCC
Confidence 37899998876
No 301
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.049 Score=50.40 Aligned_cols=79 Identities=23% Similarity=0.255 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC----C-Cc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----G-VT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~----g-~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.|++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.+ +++ + .. .+ .|..+ ..+..+.+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999998 9999999998888999 898888987765433 221 1 11 12 24431 222333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2378999988773
No 302
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.96 E-value=0.044 Score=48.89 Aligned_cols=79 Identities=22% Similarity=0.340 Sum_probs=50.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--CCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.. ..+.+++++... .+ |.. +..+..+.+.+... +++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLR-KIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCCC
Confidence 4789999988 9999999999999999 8888765432 223344444322 22 332 12333333433322 378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 303
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.11 Score=45.92 Aligned_cols=79 Identities=14% Similarity=0.184 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~~----~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |.+|..+++.+...|+ +++.+.++.+ +.+ .+++.+... .+ |.. +..++.+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVA-DAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 5689999988 9999999999999999 6766655432 222 223334322 22 332 1233333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 304
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.95 E-value=0.048 Score=48.82 Aligned_cols=76 Identities=24% Similarity=0.354 Sum_probs=50.1
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEe--CCCCCCchHHHHHHHHh--CCCccE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi--~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +.+....+ |.. +..+..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~-d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLS-DKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCC-CHHHHHHHHHHHHHhcCCCCE
Confidence 6899988 9999999999988999 8999988877654332 22322222 332 1233444444332 247899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 305
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.93 E-value=0.045 Score=49.14 Aligned_cols=80 Identities=16% Similarity=0.292 Sum_probs=50.4
Q ss_pred CCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
-+++++||+|+ +++|.++++.+...|+ +|+.+.++++..+.+++ ++.... .|.. +..+..+.+.+...
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVA-SDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCC-CHHHHHHHHHHHHHH
Confidence 35789999984 5899999999989999 78877665443333333 343222 2333 23344444443322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 479999998864
No 306
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.035 Score=49.47 Aligned_cols=75 Identities=23% Similarity=0.354 Sum_probs=49.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc-EE--eCCCCCCchHHHHHHHHh--CCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~-~v--i~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++ +..+.. .. .|..+ ..++.+.+.... .+++|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 5789999988 9999999999988999 89999887765 112221 12 23331 233333343332 237899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
No 307
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.041 Score=49.31 Aligned_cols=79 Identities=28% Similarity=0.325 Sum_probs=51.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+.++.+..+.+++ .+... . .|..+ ..+....+.++. .++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999988999 89999888754443333 23221 2 23331 223333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 308
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.93 E-value=0.029 Score=46.07 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=41.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
.|..|+++|+ -++|+..++-+...|+ +||++.++++.+..+-+.-..+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~ 54 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSL 54 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcc
Confidence 5788999998 6799999999999999 9999999999988776654443
No 309
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.91 E-value=0.048 Score=48.33 Aligned_cols=78 Identities=23% Similarity=0.336 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEe--CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+.. .++ |.. +...+.+.+..... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDIT-DRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999988999 89999888776554322 2322 222 332 12333333433322 3
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 310
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.91 E-value=0.038 Score=56.46 Aligned_cols=76 Identities=25% Similarity=0.339 Sum_probs=56.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhCCCcEEeCCCC-CCc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPND-NNE 250 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~---------------------~~~~l~~~g~~~vi~~~~-~~~ 250 (378)
.+++|+|+|+|..|+.++..++..|. +|+.++..+. ..+.++++|++..++..- .+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888877652 567778899877665531 112
Q ss_pred hHHHHHHHHhCCCccEEEeccCCh
Q 017052 251 PVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+. ++. .++|.||.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 222 221 2689999999863
No 311
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.046 Score=48.47 Aligned_cols=77 Identities=26% Similarity=0.410 Sum_probs=51.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C--CCc-EE--eCCCCCCchHHHHHHHHhC--
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVT-EF--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~--g~~-~v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.. . +.. ++ .|..+ ..++.+.+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 578999998 9999999988888898 89888888876654432 1 211 12 24431 3344444444322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37899999886
No 312
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.90 E-value=0.084 Score=46.41 Aligned_cols=104 Identities=21% Similarity=0.266 Sum_probs=72.8
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~~ 260 (378)
...+..+|.+||=+|+| .|..++.+++..|..+|++++.+++-++.+++ .+... .+..+ . +.+ .+.
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d-----A-e~L-Pf~ 116 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD-----A-ENL-PFP 116 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec-----h-hhC-CCC
Confidence 44556689999998775 58999999999986699999999998887765 22221 11111 0 011 122
Q ss_pred CCCccEEEeccCC------hHHHHHHHHHhccCCccEEEeccCCC
Q 017052 261 DGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 261 ~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+..||+|.-+.|- +..+.++.+.++|+ |+++.+.....
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 3378888766652 46789999999997 99998876654
No 313
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.063 Score=46.95 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=49.8
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+++|+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++...+ .|..+ ..++.+.+..+. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 5899988 9999999999988999 899898988776544 44444332 34431 223333333332 26899998765
No 314
>PRK08643 acetoin reductase; Validated
Probab=95.90 E-value=0.043 Score=48.95 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=51.3
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.. .+... . .|..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999988 9999999999999999 89999888766544322 23222 1 23331 233333333332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999998864
No 315
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.047 Score=48.55 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEe--CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|.++++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ +..+ ..+....+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999988 9999999999999999 89999988766544322 2322 222 3321 2333333333322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999988873
No 316
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.033 Score=50.35 Aligned_cols=78 Identities=17% Similarity=0.209 Sum_probs=52.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCc-EEe--CCCCCCchHHHHHHHHh--CCCccE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~-~vi--~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
+++|||+|+ |.+|..+++.+...|. +|+.++++.++.+.+.+ ++.. ..+ |.. +..++.+.+.... .+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVT-DRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCC-CHHHHHHHHHHHHHHcCCCCE
Confidence 568999998 9999999998888898 89999998887665544 2221 122 332 1233333333322 237899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 317
>PLN02253 xanthoxin dehydrogenase
Probab=95.88 E-value=0.043 Score=49.71 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--c-EE--eCCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EF--LNPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~-~v--i~~~~~~~~~~~~i~~~~~--~~ 263 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +.++. . .. .|..+ ..++.+.+..... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4789999988 9999999998888899 899888876654433 33322 1 12 23331 2333333333222 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 8999998864
No 318
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.88 E-value=0.12 Score=41.66 Aligned_cols=99 Identities=15% Similarity=0.217 Sum_probs=56.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHhCCCcEEe-CCCCCCch
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKC----EKAKAFGVTEFL-NPNDNNEP 251 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~----~~l~~~g~~~vi-~~~~~~~~ 251 (378)
+|+|.|+|++|..++..+...|..+++.++.+. .|. +.++++....-+ .++. ...
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~-~~~ 79 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPE-GIS 79 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEee-ecC
Confidence 589999999999999999999998888887652 121 223334432211 1110 000
Q ss_pred HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.. ...++ -.++|+|++|...........+.+...+-.++..+..
T Consensus 80 ~~-~~~~~-~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 80 ED-NLDDF-LDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred hh-hHHHH-hcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 00 01111 1378999999988655444555555541335555443
No 319
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.084 Score=47.19 Aligned_cols=77 Identities=23% Similarity=0.318 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCc-EEe--CCCCCCchHHHHHHHHhCCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVT-EFL--NPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~-~vi--~~~~~~~~~~~~i~~~~~~~ 263 (378)
.++++||+|+ +++|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |.. +..++.+.+.. .++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~--~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS-SPEAREQLAAE--AGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-CHHHHHHHHHH--hCC
Confidence 4789999998 9999999999988999 89999998776554322 2322 122 332 12233333322 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 320
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.057 Score=48.16 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=50.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCc--EE--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT--EF--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~--~v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. .+... .. .|..+ ..++...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 568999998 9999999988888898 8999999887765443 23211 12 23321 2233333333221 3689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 321
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.86 E-value=0.054 Score=48.32 Aligned_cols=79 Identities=24% Similarity=0.374 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++.+... . .|..+ ..++...+..... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5889999988 9999999998888899 899999987654432 2334222 2 23331 3334444443322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999988874
No 322
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.83 E-value=0.053 Score=50.32 Aligned_cols=78 Identities=24% Similarity=0.323 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC---c-EE--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~---~-~v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++.. . .. .|..+ ..+..+.+.++. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 5788999988 9999999998888898 899998888775443 33321 1 12 23331 223333333322 23
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6899999887
No 323
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.064 Score=48.54 Aligned_cols=78 Identities=18% Similarity=0.293 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC---cEEe--CCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV---TEFL--NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~---~~vi--~~~~~~~~~~~~i~~~~~- 261 (378)
.++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+ .+. -.++ |..+ .+++.+ +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHh
Confidence 3578999998 9999999998888899 89999888776544432 221 1122 3331 233433 444322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998874
No 324
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.82 E-value=0.054 Score=48.44 Aligned_cols=79 Identities=22% Similarity=0.231 Sum_probs=50.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE---KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~---~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.++++..+ .+.+.+... . .|..+ .......+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 8888877732222 222334322 2 23331 223333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 325
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.82 E-value=0.079 Score=50.31 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=59.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
+..+--.+++|||+|+|-+|..++.-+...|...++...|+.+|.+ +++++|+. ++.++ ++.+.+. .+|
T Consensus 171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~----el~~~l~-----~~D 240 (414)
T COG0373 171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE----ELLEALA-----EAD 240 (414)
T ss_pred HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH----HHHHhhh-----hCC
Confidence 4444457899999999999999999999999889999999988865 55778843 33222 2222332 589
Q ss_pred EEEeccCChH
Q 017052 266 YSFECIGDTG 275 (378)
Q Consensus 266 ~vid~~g~~~ 275 (378)
+||.+++.+.
T Consensus 241 vVissTsa~~ 250 (414)
T COG0373 241 VVISSTSAPH 250 (414)
T ss_pred EEEEecCCCc
Confidence 9999998753
No 326
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.82 E-value=0.059 Score=48.12 Aligned_cols=79 Identities=22% Similarity=0.386 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-Ee--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ ++... .+ |.. +..+..+.+.+.. .+++|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVT-RQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 9999999999998999 89999998887655433 33221 22 332 1233444444332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 327
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.078 Score=46.15 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=47.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCC--CccEEEe
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFE 269 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~--~~d~vid 269 (378)
.+++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ .....++..+ -.+ .+.+.++... +.|++|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D--~~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVD--LTD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecC--CCC-HHHHHHHHHhcCCCCEEEE
Confidence 368999988 99999999877666 6 89999998877655543 2112223222 111 1223332222 6899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9874
No 328
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.80 E-value=0.047 Score=48.65 Aligned_cols=79 Identities=24% Similarity=0.338 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++|||+|+ |.+|..+++.+...|. +|+.+++++++.+.+. +.+... . .|.. +..++.+.+..+. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVT-DEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999998888899 8999999887654432 223222 2 2333 1233333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 78999988863
No 329
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.06 Score=49.56 Aligned_cols=78 Identities=21% Similarity=0.293 Sum_probs=50.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC-----CCc-EE--eCCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVT-EF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~-----g~~-~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
.+++|||+|+ |++|..+++.+...|+ +|+.+.++.++.+.+ +.+ +.. .. .|..+ ..+..+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5789999998 9999999998888899 888888887764432 111 111 12 23331 2333333443322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 37899999887
No 330
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.80 E-value=0.062 Score=48.36 Aligned_cols=78 Identities=14% Similarity=0.262 Sum_probs=49.3
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.|+++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.+++ .+.... .|.. +..+..+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVA-EDASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCC-CHHHHHHHHHHHHhhc
Confidence 5789999987 4 799999999888999 78877776422233332 232222 2333 13344444444332
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+.+|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 47899999987
No 331
>PRK08264 short chain dehydrogenase; Validated
Probab=95.79 E-value=0.041 Score=48.46 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-Ee--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.++++||+|+ |.+|..+++.+...|+.+|++++++.++.+. .+... ++ |..+ ..++.+.+... +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 5678999988 9999999999998998678888888766543 22221 22 3321 22232222221 2689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 332
>PLN02476 O-methyltransferase
Probab=95.79 E-value=0.08 Score=47.73 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=66.7
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~- 260 (378)
...+..+.++||=+|.+ +|..++.+|+.++ -.++++++.+++..+.+++ .|..+-+... ..+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh
Confidence 44566778899999873 4667777777663 1279999999988776644 5665323222 223334444432
Q ss_pred ---CCCccEEE-eccCC--hHHHHHHHHHhccCCccEEEe
Q 017052 261 ---DGGADYSF-ECIGD--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ---~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.||.|| |.-.. ...++.++++++++ |.++.=
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 23799887 44322 35677889999996 887654
No 333
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.78 E-value=0.067 Score=51.09 Aligned_cols=90 Identities=24% Similarity=0.341 Sum_probs=55.1
Q ss_pred EEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHh--CCC--cE-EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 197 VVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA--FGV--TE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~--~g~--~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
|+|+|+|.+|..+++.+...+-. ++++.+++.++.+.+.+ .+. .. .+|.. +.. .+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~----~~~-~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN----DPE-SLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT----THH-HHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC----CHH-HHHHHHh-cCCEEEEC
Confidence 68899999999999998877643 79999999999777654 222 11 23332 222 2444332 56999999
Q ss_pred cCChHHHHHHHHHhccCCccEEE
Q 017052 271 IGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
+|.......+-.|+..+ -.+++
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98753444444555554 66666
No 334
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.78 E-value=0.17 Score=47.11 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=64.2
Q ss_pred CCCCeEEEEccChHHHHHHHHH-HHcCCCeEEEEcCChhhHHHHHh-----CCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAKA-----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla-~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
+..++++|+|+|..|...+..+ ...++++|.++.+++++.+.+.+ ++.... .++ ++.+.+. ..|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~----~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVN----SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC----CHHHHHh-----cCC
Confidence 4567899999999998777554 45688899999999888765432 343322 222 2333332 589
Q ss_pred EEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 266 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+|+.|+++...+- . ..++++ -++..+|....
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~p 225 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFMP 225 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCCc
Confidence 9999998754332 3 778885 77878886543
No 335
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.76 E-value=0.063 Score=47.82 Aligned_cols=79 Identities=28% Similarity=0.385 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ +..+... . .|..+ ..++.+.+..+. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999999988999 899998887665433 2223222 2 23331 233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 78999998874
No 336
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.058 Score=49.73 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhH----HHHHhCCCcE-E--eCCCCCCchHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----------EKC----EKAKAFGVTE-F--LNPNDNNEPVQQ 254 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----------~~~----~~l~~~g~~~-v--i~~~~~~~~~~~ 254 (378)
.|+++||+|+ +++|+++++.+...|+ +|+.++++. ++. +.++..+... . .|..+ ..+...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHHH
Confidence 5789999988 8999999999999999 888887763 222 2233344322 2 23331 233433
Q ss_pred HHHHHhC--CCccEEEecc-C
Q 017052 255 VIKRITD--GGADYSFECI-G 272 (378)
Q Consensus 255 ~i~~~~~--~~~d~vid~~-g 272 (378)
.+.+... +++|++|++. |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 3433322 4789999887 5
No 337
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.072 Score=48.59 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=50.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH-HH---HhCCCcE-E--eCCCCCCchHHH
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCE-KA---KAFGVTE-F--LNPNDNNEPVQQ 254 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~---------~~~~-~l---~~~g~~~-v--i~~~~~~~~~~~ 254 (378)
.+++++||+|+ +++|.++++.+...|+ +|+.++++. ++.+ .+ +..+... . .|..+ ..+..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 46789999988 9999999998888999 787776653 3222 22 2233322 2 23331 233333
Q ss_pred HHHHHh--CCCccEEEeccCC
Q 017052 255 VIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 255 ~i~~~~--~~~~d~vid~~g~ 273 (378)
.+.+.. .+++|++|++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 444332 2478999998874
No 338
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.075 Score=46.67 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ +++|++++..+...|+ +|+.+.++.++.+.+ ++.+... . .|.. +.++..+.+.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDF-SQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCC-CHHHHHHHHHHHHHHhC
Confidence 4789999998 8999999999989999 899998888776443 2334332 1 2332 1333333333332 24
Q ss_pred -CccEEEeccC
Q 017052 263 -GADYSFECIG 272 (378)
Q Consensus 263 -~~d~vid~~g 272 (378)
.+|++|.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6899999886
No 339
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.074 Score=48.13 Aligned_cols=81 Identities=17% Similarity=0.345 Sum_probs=51.0
Q ss_pred CCCCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhCCCcEEe--CCCCCCchHHHHHHHHh
Q 017052 190 DISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 190 ~~~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l-~~~g~~~vi--~~~~~~~~~~~~i~~~~ 260 (378)
+.-.++++||+|+ +++|+++++.+...|+ +|+.+.++++ +.+.+ ++++....+ |.. +..+..+.+.++.
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~ 83 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVT-DEASIDAVFETLE 83 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCC-CHHHHHHHHHHHH
Confidence 3446789999987 4899999999999999 8887776642 22222 334532222 333 1233444444432
Q ss_pred C--CCccEEEeccC
Q 017052 261 D--GGADYSFECIG 272 (378)
Q Consensus 261 ~--~~~d~vid~~g 272 (378)
. +++|+++++.|
T Consensus 84 ~~~g~iD~lv~nAG 97 (272)
T PRK08159 84 KKWGKLDFVVHAIG 97 (272)
T ss_pred HhcCCCcEEEECCc
Confidence 2 47899999876
No 340
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.71 E-value=0.056 Score=48.31 Aligned_cols=78 Identities=21% Similarity=0.288 Sum_probs=50.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----CCCc--EEe--CCCCCCchHHHHHHHHh--C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FGVT--EFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~----~g~~--~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. + .+.. ..+ |.. +..+....+.++. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-SEQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-CHHHHHHHHHHHHHHc
Confidence 578999988 9999999999988999 8999988876543332 1 2211 222 332 1223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998873
No 341
>PRK06398 aldose dehydrogenase; Validated
Probab=95.69 E-value=0.037 Score=49.62 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
.|+++||+|+ +++|.+++..+...|+ +|+.+++++++.. .... ..|..+ ..+..+.+.+... +++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 9999999999999999 8988887765432 1111 224431 2333344443322 3789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98773
No 342
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.05 Score=47.73 Aligned_cols=74 Identities=19% Similarity=0.237 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc-EEeCCCCCCchHHHHHHHHhCC-CccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~-~vi~~~~~~~~~~~~i~~~~~~-~~d~vid 269 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+.++.++. .... ...|..+ ..++.+.+.+.... +.|++|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 4678999998 9999999999989998 899998876541 1111 1223331 33344444444333 6899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 343
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.22 Score=44.23 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=30.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKC 231 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~ 231 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+. ++.++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4789999988 9999999999999999 777653 444443
No 344
>PRK06484 short chain dehydrogenase; Validated
Probab=95.67 E-value=0.049 Score=54.22 Aligned_cols=79 Identities=18% Similarity=0.339 Sum_probs=55.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE---EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 6789999988 9999999999999999 899998888776544 4455432 234431 334444444432 24789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998764
No 345
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.67 E-value=0.066 Score=48.46 Aligned_cols=78 Identities=32% Similarity=0.413 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |++|+++++.+...|+ +|+.++++.++.+.+ +..+... . .|..+ ..+....+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 899998887655433 2233321 2 23331 2233333333322 4
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 346
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.66 E-value=0.069 Score=47.44 Aligned_cols=76 Identities=14% Similarity=0.295 Sum_probs=51.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-E--eCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
+++|+|+ |.+|.+++..+...|+ +|+.+++++++.+.+.. ++... . .|..+ ..++.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899998 9999999999988999 89999998887765543 34322 1 23331 2333333433322 3789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 88764
No 347
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.66 E-value=0.068 Score=47.09 Aligned_cols=80 Identities=21% Similarity=0.332 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-EeCCCC-CCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi~~~~-~~~~~~~~i~~~~~--~~ 263 (378)
.++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... ++..+- +..++.+.++.... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999988 9999999998888999 899999987665433 2233222 222221 12333334443322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998864
No 348
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.64 E-value=0.085 Score=46.74 Aligned_cols=36 Identities=33% Similarity=0.473 Sum_probs=31.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|+|.|+|++|..+++.+..+|..+++.++.+.
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 347899999999999999999999998888887644
No 349
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.63 E-value=0.081 Score=45.73 Aligned_cols=113 Identities=12% Similarity=0.047 Sum_probs=72.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.|++|||+|+|.+|.-=+.+....|+ +++++..+. +....+..-+. +... +..+.. ..+ .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~---i~~~--~~~~~~--~~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGK---IKWI--EREFDA--EDL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcC---cchh--hcccCh--hhh--cCceEEEEeC
Confidence 67899999999999999999999999 788885554 22222222221 1111 111110 001 1488999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+.+..-+...+.+.+. +.++++-+.....++.++...-...+++
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~i 124 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQI 124 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEE
Confidence 9877767777777776 9999887766655565555443334444
No 350
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.63 E-value=0.15 Score=44.41 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=64.4
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.+.+.... .+..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~---~d~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV---GDGTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE---CCcccCCc--
Confidence 34566789999999998753 6666677776542 269999999887766543 4543321111 01111000
Q ss_pred hCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||+|+-............+.|+++ |+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1137998875444445666788899997 998764
No 351
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.63 E-value=0.078 Score=46.77 Aligned_cols=79 Identities=23% Similarity=0.276 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |.+|..++..+...|+ .|+...++.++.+.+ ..++... ++ |.. +...+.+.+.+.. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLS-DRDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence 4689999998 9999999999988998 888888877766544 3343322 22 332 1223333333322 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 352
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.62 E-value=0.067 Score=47.52 Aligned_cols=78 Identities=23% Similarity=0.349 Sum_probs=51.2
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++||+|+ |.+|..++..+...|. +|++++++.++.+.+.. .+... . .|..+ ..++...+..+. .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 468999998 9999999999888999 89999998876655433 22221 1 24431 233433333332 236
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987763
No 353
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.096 Score=46.27 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=48.3
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cE--EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TE--FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~--vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+++||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+.+. .. ..|..+ ..++.+.+.+.. ...|+++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhcc-cCCCEEEEc
Confidence 57899998 9999999888888899 89999999888776655332 12 223331 233333333321 245666655
Q ss_pred cC
Q 017052 271 IG 272 (378)
Q Consensus 271 ~g 272 (378)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 354
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.58 E-value=0.21 Score=44.20 Aligned_cols=103 Identities=19% Similarity=0.200 Sum_probs=60.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhH----HHHHhCCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKC----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~----~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |.+|..+++-+...|+ +++.+.+ +.++. ..++..+... . .|..+ ..++...+.++..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRY 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHc
Confidence 3689999998 9999999998888999 6665543 32222 2233343322 2 23331 2333333333322
Q ss_pred CCccEEEeccCC----------hH---------------HHHHHHHHhccCCccEEEeccCC
Q 017052 262 GGADYSFECIGD----------TG---------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 262 ~~~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+++|++|.+.|. .+ ..+.+.+.+.+. |+++.++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 378999999873 11 122334455665 8899887643
No 355
>PRK04457 spermidine synthase; Provisional
Probab=95.54 E-value=0.19 Score=45.15 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=63.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CC----cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GV----TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~----~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
.+.++||++|.|+ |..+..+++.....++++++.+++-.+.+++. +. +.+-.. ..+..+.+... .+.+|+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~~-~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAVH-RHSTDV 139 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHhC-CCCCCE
Confidence 4567899999864 77777888776444899999999999988873 32 111111 12333334332 347998
Q ss_pred EE-eccCC---------hHHHHHHHHHhccCCccEEE
Q 017052 267 SF-ECIGD---------TGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 267 vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 293 (378)
|+ |...+ .+.+..+.+.|+++ |.++.
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 77 54322 36678888999997 99876
No 356
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.54 E-value=0.095 Score=48.95 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|+|+|+|++|..++..+..+|..+++.++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998888888764
No 357
>PRK12743 oxidoreductase; Provisional
Probab=95.53 E-value=0.078 Score=47.33 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=48.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH----HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~----~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++||+|+ |++|..+++.+...|+ +|+.+. ++.++.+ .++..+... . .|..+ ..++...+.++. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 578999998 9999999999999999 776664 4444432 233345332 2 23331 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999988873
No 358
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.53 E-value=0.087 Score=49.22 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=31.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999899999876
No 359
>PRK07574 formate dehydrogenase; Provisional
Probab=95.52 E-value=0.13 Score=48.93 Aligned_cols=46 Identities=28% Similarity=0.387 Sum_probs=37.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.|++|.|+|.|.+|+.+++.++..|. +|++.+++....+..+.++.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~ 236 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGL 236 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCc
Confidence 57899999999999999999999999 99999887644444444443
No 360
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.52 E-value=0.065 Score=47.50 Aligned_cols=83 Identities=24% Similarity=0.292 Sum_probs=53.2
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE--E--eCCCC-CCchHHHHHHHH
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPND-NNEPVQQVIKRI 259 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~--v--i~~~~-~~~~~~~~i~~~ 259 (378)
+..+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ ++.+... + .+.+. +..++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557899999988 9999999998888899 899999987664333 3333221 2 23321 122333333333
Q ss_pred hC--CCccEEEeccCC
Q 017052 260 TD--GGADYSFECIGD 273 (378)
Q Consensus 260 ~~--~~~d~vid~~g~ 273 (378)
.. +++|++|.+.|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 368999987763
No 361
>PRK01581 speE spermidine synthase; Validated
Probab=95.50 E-value=0.22 Score=46.53 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=64.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC-----------CcEEeCCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-----------VTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g-----------~~~vi~~~~~~~~~~~~i~~~ 259 (378)
....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. .+++-.. -.+..+.+..
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHHHh-
Confidence 3455799999875 4667777888766669999999999999988631 1111000 1123333433
Q ss_pred hCCCccEEE-eccCC----------hHHHHHHHHHhccCCccEEEecc
Q 017052 260 TDGGADYSF-ECIGD----------TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 260 ~~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+.+|+|| |.... .+.+..+.+.|+++ |.++.-..
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 334799877 54221 23567788899997 99877643
No 362
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.48 E-value=0.11 Score=47.11 Aligned_cols=84 Identities=17% Similarity=0.241 Sum_probs=58.0
Q ss_pred HHhhcCC-CCCCeEEEEccCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 185 AWNVADI-SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 185 l~~~~~~-~~g~~VLI~Gag~-vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+.+..++ -.|++|+|+|+|. +|..++.++...|+ +|+.+.+..+ ++.+.+ .
T Consensus 149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~ 201 (283)
T PRK14192 149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----K 201 (283)
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----c
Confidence 3344444 5799999999976 99999999999999 8888754211 111112 2
Q ss_pred CccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 263 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+|+|+.++|.+..+. ...++++ ..++++|...
T Consensus 202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 6899999998765333 3457775 7777887543
No 363
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.07 Score=48.23 Aligned_cols=79 Identities=25% Similarity=0.326 Sum_probs=50.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------H----HHHHhCCCcE-E--eCCCCCCchHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------C----EKAKAFGVTE-F--LNPNDNNEPVQQVIK 257 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-------~----~~l~~~g~~~-v--i~~~~~~~~~~~~i~ 257 (378)
.++++||+|+ |++|..++..+...|+ +|+++.++.++ . +.++..+... . .|..+ ..+..+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 5689999998 9999999998888999 88888876542 1 1223334322 1 34432 233333333
Q ss_pred HHh--CCCccEEEeccCC
Q 017052 258 RIT--DGGADYSFECIGD 273 (378)
Q Consensus 258 ~~~--~~~~d~vid~~g~ 273 (378)
+.. .+.+|++|.+.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 322 1378999998874
No 364
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.44 E-value=0.049 Score=46.72 Aligned_cols=98 Identities=17% Similarity=0.303 Sum_probs=61.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHh-C
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRIT-D 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~-~ 261 (378)
+.....++.+||-.|+|. |..++.+|+. |. +|++++.+++-.+.+++. +...+. .. ..++ .+.. .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~--~~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH-TA--VVDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce-EE--ecCh----hhCCcC
Confidence 344556778999998864 7777788875 77 899999999877666542 222111 10 0111 1111 2
Q ss_pred CCccEEEeccC----C----hHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADYSFECIG----D----TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+|+|+.... . ...+..+.+.|+++ |+++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999986533 1 24566778889997 9965543
No 365
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.082 Score=47.62 Aligned_cols=77 Identities=21% Similarity=0.256 Sum_probs=49.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCCc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+++||+|+ |++|..++..+...|+ +|+.++++.++.+.+ +..+... ++ |.. +..++.+.+.... .+++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVR-DYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCC-CHHHHHHHHHHHHHHcCCC
Confidence 36899998 9999999988888899 898888887765432 2333332 22 332 1223333333322 2378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|.+.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999998874
No 366
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.42 E-value=0.081 Score=47.17 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.+++|||+|+ +++|..++..+...|+ +++.++++.++.+.+ +..+... . .|..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788888877665433 2233322 2 23331 233333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 367
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.41 E-value=0.29 Score=42.11 Aligned_cols=81 Identities=30% Similarity=0.405 Sum_probs=56.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-.|++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+.+.+ +++. .++.+ + +. ...+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~----~----l~---~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPE----E----IY---SVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcch----h----hc---cccCCEEEec
Confidence 468899999999999999999999999 89999999887766644 4643 22221 1 11 1157888866
Q ss_pred cCChHHHHHHHHHhc
Q 017052 271 IGDTGMITTALQSCC 285 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~ 285 (378)
..+...-...++.++
T Consensus 93 A~~~~I~~~~~~~l~ 107 (200)
T cd01075 93 ALGGVINDDTIPQLK 107 (200)
T ss_pred ccccccCHHHHHHcC
Confidence 554444445556665
No 368
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.39 E-value=0.0092 Score=48.72 Aligned_cols=95 Identities=18% Similarity=0.172 Sum_probs=57.0
Q ss_pred EEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC----CCchHHHHHHHHhCCCccEEEeccC
Q 017052 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND----NNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~----~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
|+|+|+|++|...+..++..|. .|..+.+++ +.+.+++-|........+ ........ ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999999988888999 899998888 777777655422211100 00000000 112237999999997
Q ss_pred ChHH---HHHHHHHhccCCccEEEecc
Q 017052 273 DTGM---ITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~~---~~~~~~~l~~~~G~~v~~g~ 296 (378)
.... +..+...+.++ ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 6432 33333344554 56666644
No 369
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.39 E-value=0.039 Score=51.91 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=48.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--c-EEe--CCCCCCchHHHHHHHHhCC-Cc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EFL--NPNDNNEPVQQVIKRITDG-GA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~-~vi--~~~~~~~~~~~~i~~~~~~-~~ 264 (378)
+|++|||+|+ |.+|..+++.+...|. +|+++++++...... +.++. . ..+ |.. + .+.+.++... ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~--~---~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR--D---AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCC--C---HHHHHHHHhhcCC
Confidence 5789999988 9999999999999998 898888766543221 22221 1 112 332 1 1223333333 68
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+||.+.+.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
No 370
>PRK08317 hypothetical protein; Provisional
Probab=95.38 E-value=0.16 Score=44.60 Aligned_cols=101 Identities=23% Similarity=0.341 Sum_probs=67.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC----CC-cEEeCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF----GV-TEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~----g~-~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +. ..++..+ ...+ .+
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADGL-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--cccC-----CC
Confidence 3667788999999999975 888889998873 23899999999988877664 11 1122111 1110 11
Q ss_pred hCCCccEEEecc-----CC-hHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSFECI-----GD-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+|+|+-.. .. ...+..+.++|+++ |+++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 234789877432 12 34678889999997 9988764
No 371
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.38 E-value=0.23 Score=39.15 Aligned_cols=86 Identities=13% Similarity=0.243 Sum_probs=54.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhCCCcEEeCCCCCCchHHHHH--------------
Q 017052 197 VVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNPEK---CEKAKAFGVTEFLNPNDNNEPVQQVI-------------- 256 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g--~~~vi~v~~~~~~---~~~l~~~g~~~vi~~~~~~~~~~~~i-------------- 256 (378)
|.|.|+ |.+|..++++.+... . +|++.....+- .+.++++.+..+...+ +...+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence 568899 999999999999886 5 67666554333 2445668888876654 2222222
Q ss_pred ------HHHhC-CCccEEEeccCChHHHHHHHHHhcc
Q 017052 257 ------KRITD-GGADYSFECIGDTGMITTALQSCCD 286 (378)
Q Consensus 257 ------~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~ 286 (378)
.++.. ..+|+|+..+.+-..+.-.+..+..
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~ 113 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA 113 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC
Confidence 22222 3678888877776777777788875
No 372
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.38 E-value=0.12 Score=46.76 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=49.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC---CCcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~---g~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
...+++++|+|+|++|.+++..+...|. +++++.++.++.+.+ +.+ +.......+ + .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-------~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD-------E----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh-------h----hcccCccE
Confidence 3567899999999999999988888898 899999988776544 333 221222111 1 11126899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
||+|++.
T Consensus 182 vInatp~ 188 (270)
T TIGR00507 182 IINATSA 188 (270)
T ss_pred EEECCCC
Confidence 9999875
No 373
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.14 Score=45.23 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=48.4
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---CCCcE--Ee--CCCCCCchHHHHHHHHhCCCcc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTE--FL--NPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~---~g~~~--vi--~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+. . .+... ++ |.. +..+..+.+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDIL-DTASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCC-ChHHHHHHHHHHh-hcCC
Confidence 57999988 9999999999988999 8999999887654332 1 11112 22 332 1223333333321 2579
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987663
No 374
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.36 E-value=0.097 Score=46.38 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=49.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ |.+|+.++..+...|+ +|+. ..++.++.+. ++..+... .+ |.. +..+....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-DVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 4679999988 9999999999999999 6655 4666655432 23334322 22 332 12333333433322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 375
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.36 E-value=0.11 Score=46.31 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=30.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888654
No 376
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.36 E-value=0.17 Score=44.45 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=59.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKC----EKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~----~~l~~~g~~~vi~~~~~~ 249 (378)
...+|+|.|+|++|..++..+..+|..+++.++.+. .|. +.+++++...-+... .
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~--~ 97 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY--N 97 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe--c
Confidence 357899999999999999999999998888885533 122 223334443222111 1
Q ss_pred chH-HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 250 EPV-QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 250 ~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+ .+.+.++. .++|+||+|+..........+.+...+-.++..|.
T Consensus 98 ~~i~~~~~~~~~-~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~ 144 (228)
T cd00757 98 ERLDAENAEELI-AGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAV 144 (228)
T ss_pred ceeCHHHHHHHH-hCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 111 11222222 26899999999865544444444443133555443
No 377
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.35 E-value=0.43 Score=41.58 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=66.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++.+|||+|+|.++.-=+..+...|+ +|+++...- +....+.+.|.-..+.-+ .... .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~r~-~~~~---dl-----~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIKGN-YDKE---FI-----KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-CChH---Hh-----CCCcEEEECC
Confidence 57899999999999888888888999 788775432 122222223332222111 0111 11 2789999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+.+..-.......... +.++...+.....++-++...-..++++
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAiv~rg~l~I 137 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQRSTKNFVF 137 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeEEecCCEEE
Confidence 8866555555556554 7777765444445555554332224444
No 378
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.35 E-value=0.07 Score=54.75 Aligned_cols=76 Identities=25% Similarity=0.337 Sum_probs=52.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhCCCcEEeCCCC-CC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPND-NN 249 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~---------------------~~~~l~~~g~~~vi~~~~-~~ 249 (378)
..+++|+|+|+|+.|+.++..++..|. +|++++..+. ..+.++++|++...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 7888876532 355667788765443321 01
Q ss_pred chHHHHHHHHhCCCccEEEeccCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
..+.+ +. ..+|.||.++|.
T Consensus 404 i~~~~-~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLES-LL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHHH-HH----hcCCEEEEeCCC
Confidence 11211 11 268999998885
No 379
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.34 E-value=0.12 Score=44.94 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=31.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889988876
No 380
>PRK06849 hypothetical protein; Provisional
Probab=95.33 E-value=0.54 Score=44.94 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE--eC-CCCCCchHHHHHHHHhCC-CccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LN-PNDNNEPVQQVIKRITDG-GADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v--i~-~~~~~~~~~~~i~~~~~~-~~d~v 267 (378)
..++|||+|+ ...|+.+++.++..|. +|+++++++.......+ .++.. +. .+.+...+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4589999998 5699999999999999 89999887654332111 12222 21 222245567777776655 89999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
+-+..
T Consensus 81 IP~~e 85 (389)
T PRK06849 81 IPTCE 85 (389)
T ss_pred EECCh
Confidence 97754
No 381
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.30 E-value=0.1 Score=46.59 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC--CCcEE-eCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVTEF-LNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~--g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
-..+++|||+|+ |.+|..++..+...|. +|+++.+++++....... ++..+ .|.. +. . +.+.+....++|+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~--d~-~-~~l~~~~~~~~d~ 88 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVT--EG-S-DKLVEAIGDDSDA 88 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCC--CC-H-HHHHHHhhcCCCE
Confidence 345689999998 9999999988888898 899888887765443221 12221 2333 11 1 1222222126899
Q ss_pred EEeccCChH-------------HHHHHHHHhccC-CccEEEeccC
Q 017052 267 SFECIGDTG-------------MITTALQSCCDG-WGLAVTLGVP 297 (378)
Q Consensus 267 vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 297 (378)
||.+.|... ....+++.+... .++++.++..
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 998876411 123344444332 2678887654
No 382
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.29 E-value=0.084 Score=42.22 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=56.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHH----HHHhCCC-cEEeCCCCCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKCE----KAKAFGV-TEFLNPNDNN 249 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~~----~l~~~g~-~~vi~~~~~~ 249 (378)
..+|+|.|+|++|..++..+...|..+++.++.+. .|.+ .++++.+ ..+..+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~--- 78 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP--- 78 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence 46899999999999999999999998888887643 1222 2233332 1222121
Q ss_pred chH-HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 250 EPV-QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 250 ~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+ .+...++. .++|+||+|+.+......+.+.+...+-.++..+
T Consensus 79 ~~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 79 EKIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 111 11222222 2789999999886555555555555413344443
No 383
>PRK08328 hypothetical protein; Provisional
Probab=95.29 E-value=0.13 Score=45.38 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=30.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|..++..+..+|..+++.++.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888754
No 384
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.26 E-value=0.12 Score=46.42 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=51.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
.++++||+|+ +++|..++..+...|+ +++.+.+++++.+.+ ++.+... . .|..+ ..+....+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5789999988 9999999988888899 788888887765433 2334322 2 23331 2333333333222 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 385
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.23 E-value=0.093 Score=47.01 Aligned_cols=79 Identities=16% Similarity=0.269 Sum_probs=47.4
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh------hhHHHHHhCCC-cEE--eCCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP------EKCEKAKAFGV-TEF--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~------~~~~~l~~~g~-~~v--i~~~~~~~~~~~~i~~~~ 260 (378)
.|+++||+|+ +++|.+++..+...|+ +|+.+.++. +..+.+++.+. ... .|.. +..+..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQ-DDAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcC-CHHHHHHHHHHHH
Confidence 5789999986 4899999999988999 777664332 22223322221 122 2333 1333443444332
Q ss_pred C--CCccEEEeccCC
Q 017052 261 D--GGADYSFECIGD 273 (378)
Q Consensus 261 ~--~~~d~vid~~g~ 273 (378)
. +++|+++++.|.
T Consensus 83 ~~~g~iD~lv~nag~ 97 (258)
T PRK07370 83 QKWGKLDILVHCLAF 97 (258)
T ss_pred HHcCCCCEEEEcccc
Confidence 2 478999998873
No 386
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.23 E-value=0.093 Score=47.41 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=51.0
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.+...+++++|+|+|+.+++++..++..|+.+++.+.|+.++.+.+.+ ++. .+. ..+ ....+|+|
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~----~~~-------~~~---~~~~~dlv 182 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGY----EWR-------PDL---GGIEADIL 182 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCC----cch-------hhc---ccccCCEE
Confidence 344556799999999999999999999999789999999988776644 331 110 011 11258999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
++|+.
T Consensus 183 INaTp 187 (272)
T PRK12550 183 VNVTP 187 (272)
T ss_pred EECCc
Confidence 99975
No 387
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.22 E-value=0.074 Score=47.07 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChh-hHHHH---HhCCCcEE---eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPE-KCEKA---KAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~-~~~~l---~~~g~~~v---i~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |.+|..+++.+...|+ +++... ++.. ..+.+ +..+.... .|..+ ..+..+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 4678999988 9999999999999999 676643 3332 22233 33444332 23331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
No 388
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.22 E-value=0.22 Score=45.07 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=64.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cEEeCCCC----CCchHHHHHHHHhCCCccEEE-
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEFLNPND----NNEPVQQVIKRITDGGADYSF- 268 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~vi~~~~----~~~~~~~~i~~~~~~~~d~vi- 268 (378)
++|||+|.|. |-.+=.++++...+++++++.+++=.++++++-. .+.-..+. .-.+-.+.+++... .+|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 6999997643 5556678888888899999999999999988422 11000000 01233344544332 799876
Q ss_pred eccCC---------hHHHHHHHHHhccCCccEEEe
Q 017052 269 ECIGD---------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 269 d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|++.. .+..+.+.++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 66654 35677888999998 888776
No 389
>PLN00203 glutamyl-tRNA reductase
Probab=95.20 E-value=0.16 Score=50.25 Aligned_cols=73 Identities=16% Similarity=0.341 Sum_probs=52.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC-CcE-EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-VTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g-~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+.+ ++ ... +..++ +..+.+ ...|+||.
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~----dl~~al-----~~aDVVIs 335 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD----EMLACA-----AEADVVFT 335 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh----hHHHHH-----hcCCEEEE
Confidence 47899999999999999999999998789999999888766544 53 221 11221 222222 26899999
Q ss_pred ccCCh
Q 017052 270 CIGDT 274 (378)
Q Consensus 270 ~~g~~ 274 (378)
|++.+
T Consensus 336 AT~s~ 340 (519)
T PLN00203 336 STSSE 340 (519)
T ss_pred ccCCC
Confidence 98764
No 390
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.12 Score=46.69 Aligned_cols=77 Identities=22% Similarity=0.316 Sum_probs=49.1
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh-CCCcc
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-DGGAD 265 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~-~~~~d 265 (378)
++++||+|+|++|.+++..+. .|+ +|+.+++++++.+.+ +..+... . .|..+ ..+..+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 467888899999999998885 788 899998887665433 2233322 2 24431 233333333321 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999874
No 391
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.18 E-value=0.12 Score=45.96 Aligned_cols=77 Identities=21% Similarity=0.301 Sum_probs=49.6
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
+++||+|+ |.+|..+++.+...|+ +|+.+.+++++.+.+ +..+... . .|..+ ...+.+.+..... +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 47899998 9999999999989999 899888877654332 2334322 2 23331 2333333433322 368
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 392
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.18 E-value=0.1 Score=49.72 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=31.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999889999886
No 393
>PLN03139 formate dehydrogenase; Provisional
Probab=95.16 E-value=0.2 Score=47.61 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=37.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.|++|.|+|.|.+|+.+++.++..|. +|++.+++....+..+.+|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 68899999999999999999999999 89999887544444444543
No 394
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.14 E-value=0.3 Score=37.67 Aligned_cols=74 Identities=27% Similarity=0.408 Sum_probs=53.1
Q ss_pred EEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
|+|.|.|.+|+.+++.++..+. .+++++.++++.+.+++.|...+. -+ ..-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd---~~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GD---ATDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S----TTSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-cc---chhhhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999999776 899999999999999998865433 32 12223344433337888887877643
No 395
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.14 E-value=0.13 Score=45.37 Aligned_cols=79 Identities=23% Similarity=0.376 Sum_probs=47.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~----~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |.+|..++..+...|+ +|+++.++..+ .+ .++..+... .+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999998 9999999999999999 77666555432 22 122233222 22 3331 2233333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 396
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.09 Score=46.97 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
+|+++||+|+ |++|..+++.+...|+ +|+.+.++.++.. .-.... ..|..+ ..+....+.++. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999998 9999999999988999 8999988765321 111111 223331 222322232222 23789999
Q ss_pred eccC
Q 017052 269 ECIG 272 (378)
Q Consensus 269 d~~g 272 (378)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 397
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.14 E-value=0.2 Score=44.29 Aligned_cols=104 Identities=18% Similarity=0.176 Sum_probs=65.6
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~- 260 (378)
...+..+.++||-+|.| .|..++.+|+.++ ..++++++.+++..+.+++ .|....+... ..+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHh
Confidence 34566778899998873 3666667777653 3389999999988777654 4543322211 123334444432
Q ss_pred ---CCCccEEEeccC---ChHHHHHHHHHhccCCccEEEe
Q 017052 261 ---DGGADYSFECIG---DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ---~~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.||+||--.. -...++.++++++++ |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999884322 135677889999997 877654
No 398
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.12 E-value=0.19 Score=43.76 Aligned_cols=95 Identities=19% Similarity=0.249 Sum_probs=62.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
-+|.+||=+|+|+ |+++..+|+ +|+ .|++++.+++..+.++...... .++|. ....+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~---~~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYR---QATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccch---hhhHHHHHhc-CCCccEEEE
Confidence 4889999999843 555555554 567 9999999999999888533322 24564 2222333321 148999874
Q ss_pred -----ccCCh-HHHHHHHHHhccCCccEEEe
Q 017052 270 -----CIGDT-GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 270 -----~~g~~-~~~~~~~~~l~~~~G~~v~~ 294 (378)
-+..+ ..+..+.+.++|+ |.++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 33333 3566788899997 887765
No 399
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.12 E-value=0.17 Score=48.48 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHhC-CCcEE-eCCCCCCchHHHHHHHH
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-------KAKAF-GVTEF-LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-------~l~~~-g~~~v-i~~~~~~~~~~~~i~~~ 259 (378)
.-..+.+|||+|+ |.+|..+++.+...|. +|+++.++..+.+ ..+.. +...+ .|..+ ...+.+.+...
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh
Confidence 3456789999998 9999999999988898 8999988765421 11222 22222 23331 22333333321
Q ss_pred hCCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGD 273 (378)
Q Consensus 260 ~~~~~d~vid~~g~ 273 (378)
..++|+||+|.+.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1168999998864
No 400
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.14 Score=46.19 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=50.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+.+++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +..+... . .|.. +..++.+.+.+.. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVT-DPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHhcC
Confidence 4568999998 9999999998888899 888888876654332 2234322 2 2333 1233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 78999998874
No 401
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.09 E-value=0.14 Score=47.19 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=32.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~ 171 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKS 171 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCC
Confidence 67899999999999999999999999 89999876543
No 402
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.09 E-value=0.12 Score=46.27 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=49.1
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN---PEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~---~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ +++|+++++.+...|+ +|+.+.+. +++.+.+ ++++.... .|.. +..+..+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVA-SDEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCC-CHHHHHHHHHHHHHHh
Confidence 5789999984 5899999998888999 77776543 2333322 33443322 2333 13344444444332
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998763
No 403
>PLN02823 spermine synthase
Probab=95.08 E-value=0.19 Score=46.75 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=60.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cE-EeCCCC---CCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TE-FLNPND---NNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~-vi~~~~---~~~~~~~~i~~~~~~~~d~v 267 (378)
..++|||+|+|. |..+..+++..+..++++++.+++-.++++++-. .. ..+... ...+-...+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998753 5556677787776689999999999999987432 10 000000 01222333432 33489987
Q ss_pred E-eccC----C-------hHHHH-HHHHHhccCCccEEEe
Q 017052 268 F-ECIG----D-------TGMIT-TALQSCCDGWGLAVTL 294 (378)
Q Consensus 268 i-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~ 294 (378)
| |... + .+.++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 7 6432 1 12455 677889997 987753
No 404
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.06 E-value=0.051 Score=46.84 Aligned_cols=101 Identities=20% Similarity=0.307 Sum_probs=65.0
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC--
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~-- 261 (378)
+....++||-+|.+ +|..++.+|+.+ +. +++.++.++++.+.+++ .|....+... ..+..+.+.++..
T Consensus 42 ~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 42 RLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELANDG 117 (205)
T ss_dssp HHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHHTT
T ss_pred HhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHhcc
Confidence 34456799999874 488888899876 45 99999999998887754 4543322211 2234444444432
Q ss_pred --CCccEEE-eccCC--hHHHHHHHHHhccCCccEEEec
Q 017052 262 --GGADYSF-ECIGD--TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 --~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.||+|| |+--. ...+..++++++++ |.++.=.
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699888 55432 24577888999985 7666543
No 405
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.02 E-value=0.13 Score=49.26 Aligned_cols=74 Identities=22% Similarity=0.348 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC-cEEe--CCCCCCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV-TEFL--NPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~-~~vi--~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.+++++|+|+ |++|.++++.+...|+ +|+++++++++.+.. +..+. ...+ |.. +. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--QE---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--CH---HHHHHHh-CCCCEE
Confidence 4789999998 9999999998888999 899888887665432 11111 1122 332 21 2233322 378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988763
No 406
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.00 E-value=0.17 Score=47.31 Aligned_cols=37 Identities=35% Similarity=0.524 Sum_probs=33.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 58899999999999999999999999 89999886543
No 407
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=94.98 E-value=0.19 Score=44.10 Aligned_cols=102 Identities=21% Similarity=0.257 Sum_probs=70.2
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
.+.++.+|++|+=.|.| .|-+++-||+..|. .+|+..+..++..+.+++ +|....+... ..+ +++...
T Consensus 88 ~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~D----v~~~~~ 160 (256)
T COG2519 88 ARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGD----VREGID 160 (256)
T ss_pred HHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--ecc----cccccc
Confidence 57899999999888765 37778888887764 489999999988777654 4443322111 111 222222
Q ss_pred C-CccEEE-eccCChHHHHHHHHHhccCCccEEEecc
Q 017052 262 G-GADYSF-ECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~-~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+ .+|.|| |--..-..++.+...|+++ |.++.+.-
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 2 788655 6655557889999999997 99988843
No 408
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.97 E-value=0.11 Score=46.08 Aligned_cols=74 Identities=27% Similarity=0.321 Sum_probs=48.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
+++++||+|+ |.+|..++..+...|+ +|+.++++. ++..+... . .|.. +..++.+.+.+... +++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVS-DAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCC-CHHHHHHHHHHHHHHcCCCCE
Confidence 5689999998 8999999999988999 899988875 22222211 2 2332 12334443433322 36899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 409
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.95 E-value=0.25 Score=42.93 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=62.7
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeC-------CCCCCch-HHHHHHHHh-
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLN-------PNDNNEP-VQQVIKRIT- 260 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~-------~~~~~~~-~~~~i~~~~- 260 (378)
..++.+||+.|+| .|.-++.+|. .|. .|++++.++...+.+. +.+...... +....-. ....+.++.
T Consensus 32 ~~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 3577899999987 3888888885 698 8999999999888752 233211000 0000000 000011111
Q ss_pred --CCCccEEEeccCC--------hHHHHHHHHHhccCCccEEEeccC
Q 017052 261 --DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 261 --~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.+.+|.|+|+..- ...+..+.++|+++ |+++.++..
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1268999997531 24577888999997 987766543
No 410
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.93 E-value=0.15 Score=45.55 Aligned_cols=78 Identities=24% Similarity=0.307 Sum_probs=48.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hh----CCCc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KA----FGVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l-~~----~g~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
+++++||+|+ +++|.+++..+...|+ +|+.+.+ +.++.+.+ +. .+.. .. .|..+ ..+..+.+.++.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999998 9999999999999999 7776643 44443322 11 2332 12 24431 233443444332
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+.+|+++.+.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247899998875
No 411
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.87 E-value=0.87 Score=33.67 Aligned_cols=75 Identities=24% Similarity=0.398 Sum_probs=49.5
Q ss_pred eEEEEccChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG---ASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g---~~~vi-~v~~~~~~~~~l-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+|.|+|+|.+|.+++.-+...| . +++ +..+++++.+.+ ++++..... .+..+.+. ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 4678899999999999998888 6 777 548999887766 556643332 12333343 36999999
Q ss_pred cCChHHHHHHHHH
Q 017052 271 IGDTGMITTALQS 283 (378)
Q Consensus 271 ~g~~~~~~~~~~~ 283 (378)
+.. ..+...+..
T Consensus 69 v~p-~~~~~v~~~ 80 (96)
T PF03807_consen 69 VKP-QQLPEVLSE 80 (96)
T ss_dssp S-G-GGHHHHHHH
T ss_pred ECH-HHHHHHHHH
Confidence 976 344444443
No 412
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.86 E-value=0.23 Score=43.59 Aligned_cols=74 Identities=23% Similarity=0.377 Sum_probs=54.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh--CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA--FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~--~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+++|.|+|-+|..+++.+...|. .|+.++.++++.+...+ +....+. .+ ..-.+.++++--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd---~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GD---ATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ec---CCCHHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999999 89999999999777433 5554443 22 222345555533489999988887
Q ss_pred h
Q 017052 274 T 274 (378)
Q Consensus 274 ~ 274 (378)
.
T Consensus 77 d 77 (225)
T COG0569 77 D 77 (225)
T ss_pred C
Confidence 3
No 413
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.86 E-value=0.29 Score=41.98 Aligned_cols=100 Identities=11% Similarity=0.140 Sum_probs=59.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-------------------h----HHHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------K----CEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-------------------~----~~~l~~~g~~~vi~~~~~~ 249 (378)
...+|+|.|+|++|.-++..+..+|..+++.++.+.- | .+.+++++.+..+...+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4578999999999999999999999988888865421 1 22345565554333211
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+...++. .++|+|++|..........-+.+.+.+-.++..+
T Consensus 98 ~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~ 142 (197)
T cd01492 98 DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKLGVKFYATG 142 (197)
T ss_pred cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 11111111111 2789999998775554444455554313344443
No 414
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.85 E-value=0.23 Score=44.87 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=56.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----hCCCcE---EeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-----AFGVTE---FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-----~~g~~~---vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+.|++.+|+|+ .++|.+-+.=+...|. +|+-+.|+.+|++..+ +.++.. ++|+.+.+. ..+.+++...+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhcC
Confidence 34788999999 7899876644444999 7999999999987664 355322 457764444 34556655555
Q ss_pred -CccEEEeccCC
Q 017052 263 -GADYSFECIGD 273 (378)
Q Consensus 263 -~~d~vid~~g~ 273 (378)
.+-+.++++|-
T Consensus 125 ~~VgILVNNvG~ 136 (312)
T KOG1014|consen 125 LDVGILVNNVGM 136 (312)
T ss_pred CceEEEEecccc
Confidence 77889999984
No 415
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.85 E-value=0.19 Score=41.59 Aligned_cols=89 Identities=20% Similarity=0.308 Sum_probs=56.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|-++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+...- +..+.+. ..|+||-|+..+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~-------s~~e~~~-----~~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVAD-------SPAEAAE-----QADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEES-------SHHHHHH-----HBSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhh-------hhhhHhh-----cccceEeecccc
Confidence 468899999999999999999999 899999999999988887743321 2222222 347888777765
Q ss_pred HHHHHHHH------HhccCCccEEEeccC
Q 017052 275 GMITTALQ------SCCDGWGLAVTLGVP 297 (378)
Q Consensus 275 ~~~~~~~~------~l~~~~G~~v~~g~~ 297 (378)
...+..+. .+.++ ..+++++..
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 44444332 34443 455555443
No 416
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.85 E-value=0.18 Score=45.11 Aligned_cols=80 Identities=20% Similarity=0.150 Sum_probs=49.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~----~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.+++++||+|+ |++|..+++.+...|+ +++.+.++. +..+ .++..+... . .|..+ ..+..+.+....
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~ 82 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHH
Confidence 36789999988 9999999999999999 677665643 3222 223334322 2 24431 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++.+.|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 2378999988874
No 417
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.85 E-value=0.15 Score=46.98 Aligned_cols=95 Identities=11% Similarity=0.073 Sum_probs=63.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHH-HhCCCc--EEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKA-KAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l-~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
...++++|+|+|..|.+.+..+.. .+.+++.+..+++++.+.+ +++... .+. . .+..+.+. +.|+|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av~-----~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIPE-----AVDLV 192 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHhh-----cCCEE
Confidence 466789999999999999988864 6777899999998876644 334311 111 1 12333332 68999
Q ss_pred EeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 268 FECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 268 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.|+.++.-+-.. .++++ -++..+|....
T Consensus 193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEccCCCCceeCc--cCCCC-CEEEecCCCCC
Confidence 9998875443333 26775 77888886654
No 418
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.84 E-value=0.14 Score=45.02 Aligned_cols=70 Identities=17% Similarity=0.314 Sum_probs=49.4
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
|+|+|+ |.+|..+++.+...+. +|.++.|+.. ....++..|+..+ ..+ .+-.+.+.+... ++|.||-+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d---~~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EAD---YDDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES----TT-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecc---cCCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 8988888764 4566778888654 222 111223333222 7999998888
No 419
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.84 E-value=0.15 Score=45.30 Aligned_cols=77 Identities=19% Similarity=0.278 Sum_probs=47.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH-H---HHHhCCCc-EE--eCCCCCCchHHHHHHHHhC--CC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KC-E---KAKAFGVT-EF--LNPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~-~---~l~~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~~ 263 (378)
+++||+|+ |.+|..++..+...|+ +|+.++++.. +. + .++..+.. .+ .|..+ ..++.+.+.+... ++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57999998 9999999999988999 8888876532 21 2 22223322 12 23331 2333333333322 36
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999998864
No 420
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.83 E-value=0.37 Score=43.47 Aligned_cols=130 Identities=17% Similarity=0.132 Sum_probs=85.9
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC---------CCchHHHHHHHH
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND---------NNEPVQQVIKRI 259 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~---------~~~~~~~~i~~~ 259 (378)
++..++.++|+.|+|..|+.++..++..|+ .|...+-.+.+.+..+++|+.-.-..++ -..+|...-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 344567789999999999999999999999 8999988999988888888754321111 122343333333
Q ss_pred hC---CCccEEEeccCC-----h-HHHHHHHHHhccCCccEEEeccCCCCCeeecc-ccc--cccccEEEEeee
Q 017052 260 TD---GGADYSFECIGD-----T-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-YGL--FLSGRTLKGSLF 321 (378)
Q Consensus 260 ~~---~~~d~vid~~g~-----~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~--~~~~~~i~g~~~ 321 (378)
.. .++|+||-+.=- | -...+....|+++ +.+|++....++ +.... +.. ..++.+|.|...
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GG-Nce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGG-NCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCC-CcccccCCeEEEeCCeEEEeecC
Confidence 22 289999976522 1 2345788899997 888988654442 22211 111 134888887743
No 421
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.82 E-value=0.08 Score=47.51 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=49.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+. ..... ..|..+ ..++.+.+.++. .+++|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999988 9999999999999999 88888777654321 11111 123331 233444444332 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 422
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.82 E-value=0.15 Score=42.74 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=29.2
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999999997888887765
No 423
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.80 E-value=0.16 Score=47.02 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=32.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
.|++|||+|+ |.+|..+++.+...|. +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4789999998 9999999998888898 8887777765433
No 424
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.80 E-value=0.24 Score=45.14 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=65.3
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHhCCCcEEeCCCCCC
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
.+||+....+. |++..++ -.|++|+|+|- +.+|.-++.++...|+ .|++.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45655444444 3355555 47999999995 9999999999999999 888883 332
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++++|...
T Consensus 194 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 -DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred -CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1111222 4799999999877665544 7775 7888887643
No 425
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.80 E-value=0.18 Score=46.24 Aligned_cols=73 Identities=22% Similarity=0.379 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHhCC-CcE---Ee--CCCCCCchHHHHHHHHhCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC---EKAKAFG-VTE---FL--NPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~---~~l~~~g-~~~---vi--~~~~~~~~~~~~i~~~~~~ 262 (378)
.+..|+|+|| |-+|..++..+...|+ +|.++.|+++.. +.++++. +.. ++ |.. +...|.+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~-d~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLL-DEGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEecccc-ccchHHHHHh-----
Confidence 6789999999 8899999999999999 899999988763 4577764 221 22 221 1334544443
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
|.|.||.+..
T Consensus 78 gcdgVfH~As 87 (327)
T KOG1502|consen 78 GCDGVFHTAS 87 (327)
T ss_pred CCCEEEEeCc
Confidence 6888887664
No 426
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.77 E-value=0.2 Score=46.12 Aligned_cols=79 Identities=19% Similarity=0.304 Sum_probs=48.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHHHhCCCcEE-e--CCCCCCchHHHHHHHHh-CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVTEF-L--NPNDNNEPVQQVIKRIT-DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~----~~l~~~g~~~v-i--~~~~~~~~~~~~i~~~~-~~ 262 (378)
.|+++||+|+ +++|..+++.+...|+ +|+.++++. ++. +.++..|.... + |..+ .....+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 5789999988 9999999998888999 788877642 222 22333443322 2 3321 122222222211 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 427
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.76 E-value=0.28 Score=42.16 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=31.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|.|+|++|..+++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999788888877
No 428
>PRK09135 pteridine reductase; Provisional
Probab=94.74 E-value=0.22 Score=43.95 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH----HhCCC--cEE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA----KAFGV--TEF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l----~~~g~--~~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |.+|..+++.+...|+ +|++++++. ++.+.+ +.... ... .|..+ ...+...+....
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999998 9999999998888899 898888753 333322 22211 112 23331 223333333321
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+++|+||.+.|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 236899999987
No 429
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.71 E-value=0.2 Score=44.15 Aligned_cols=78 Identities=17% Similarity=0.295 Sum_probs=46.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhCCCc-EEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVT-EFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l----~~~g~~-~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+.++|||+|+ |.+|..+++.+...|. +++.+.+ +.+..+.+ +..+.. .++ |.. +..++.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVT-DKAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcC-CHHHHHHHHHHHHHHc
Confidence 3578999998 9999999999999999 6655444 33333322 223322 122 332 12333333333322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37899999887
No 430
>PLN03075 nicotianamine synthase; Provisional
Probab=94.70 E-value=0.22 Score=45.26 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=64.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhCC-----CcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG-----VTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~g-----~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
+.++|+-+|.|..++.++.+++.+. ..+++.++.+++..+.+++.- ....+.+. ..+..+... ..++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~--~~Da~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFH--TADVMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEE--ECchhhccc--ccCCcCE
Confidence 7799999999999998888887553 238999999999988887643 11212221 111111110 1237999
Q ss_pred EEecc-------CChHHHHHHHHHhccCCccEEEe
Q 017052 267 SFECI-------GDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 267 vid~~-------g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
||-.+ .-...+....+.|+++ |.++.=
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 88554 2235678889999996 877654
No 431
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.69 E-value=0.21 Score=46.22 Aligned_cols=79 Identities=24% Similarity=0.288 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhCCC---c-EE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l-~~~g~---~-~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ +++|.++++.+...| + +|+.+.++.++.+.+ ++++. . .. .|..+ ..+..+.+.++. .
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 3678999998 899999998888889 7 888888887765433 33321 1 12 24431 223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 378999988763
No 432
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.68 E-value=0.22 Score=47.17 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=31.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999999889888776
No 433
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.68 E-value=0.2 Score=44.15 Aligned_cols=78 Identities=22% Similarity=0.378 Sum_probs=48.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hCCCcE-Ee--CCCCCCchHHHHHHHHhC--C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l~----~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
++++||+|+ |.+|..++..+...|+ +++.+ +++.++.+.+. ..+... ++ |..+ ..++.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 578999988 9999999988888899 78887 88776654332 222212 22 3321 2233333333222 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 68999988764
No 434
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.67 E-value=0.15 Score=52.46 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE----EeCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~----vi~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... ..|..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999999988999 89999898776554321 23211 223331 233333444332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
No 435
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.67 E-value=0.3 Score=44.34 Aligned_cols=66 Identities=21% Similarity=0.375 Sum_probs=48.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|.|+|.|.+|..++..++..|. +|+++++++++.+.+.+.|...... .+. +.+ ...|+||-|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~~~-----~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-SLL-----KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-hHh-----cCCCEEEEcCCH
Confidence 58899999999999998888898 8999999999988888776421111 111 111 257888888775
No 436
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.66 E-value=0.17 Score=46.64 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=57.7
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCcEEeCCCCCCchHHH-HHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQ-VIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~~vi~~~~~~~~~~~-~i~~~~~~~~d~vid~~g 272 (378)
.+|+|+|+|++|......+...|. .|+.++++.++.+.+++- |.. +..... ...+.. .......+.+|+||-|+-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECC
Confidence 369999999999988888778898 788898988777777653 331 211110 000000 000001137899999987
Q ss_pred ChH---HHHHHHHHhccCCccEEEec
Q 017052 273 DTG---MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~~---~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+ .+..+...+.++ ..++.+-
T Consensus 80 ~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred HHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 643 233344445665 6666553
No 437
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.62 E-value=0.16 Score=46.14 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=50.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
..+++|||+|+|++|.+++..+...|+.+|+++.++.++.+.+.+ ++....+..+ . +..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~--~-~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD--L-ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec--c-cchhcc-----ccCCEEEEC
Confidence 467899999999999999999999996699999999888765543 4321101111 0 010111 268999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
+..
T Consensus 193 Tp~ 195 (278)
T PRK00258 193 TSA 195 (278)
T ss_pred CcC
Confidence 865
No 438
>PLN02928 oxidoreductase family protein
Probab=94.62 E-value=0.24 Score=46.46 Aligned_cols=97 Identities=20% Similarity=0.316 Sum_probs=58.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-----cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-----TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-----~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
-.|++|.|+|.|.+|+.+++.++.+|+ +|++.+++..+... ..++. ...........++.+.+. ..|+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDi 229 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCE
Confidence 358899999999999999999999999 99999876332211 11100 000000000123333333 3688
Q ss_pred EEeccCChH-----HHHHHHHHhccCCccEEEecc
Q 017052 267 SFECIGDTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 267 vid~~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
|+-+...+. .-...+..|+++ ..+|+++-
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 887765321 123567777775 77777753
No 439
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=94.58 E-value=0.22 Score=44.05 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=47.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ |.+|..++..+...|+ +++++.+ ++++.+. ++..+... .+ |.. +...+.+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS-KVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 4789999988 9999999998888899 6766543 4443322 22333322 22 332 12333333443322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+.+|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 440
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.58 E-value=0.3 Score=46.04 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=31.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|||+|+|++|..+++.+..+|..+++.++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457899999999999999999999998898887754
No 441
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.56 E-value=0.8 Score=41.59 Aligned_cols=107 Identities=17% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC-CcE----EeCCCCCCch---HHHHHHHHhCC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-VTE----FLNPNDNNEP---VQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g-~~~----vi~~~~~~~~---~~~~i~~~~~~ 262 (378)
-+++-|+|+|+ ++.|..++.-+...|. .|++..-+++..+.++..- .++ ..|..+ +++ ..+.+++..+.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE 104 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence 35677999999 9999999999999999 8888888888777775422 211 334432 222 33344454444
Q ss_pred -CccEEEeccCCh--------------------------HHHHHHHHHhccCCccEEEeccCCCC
Q 017052 263 -GADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 263 -~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
+.=-++++.|-. ......+.++++..||+|.++...+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 667788888721 23344566777766999999877653
No 442
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.55 E-value=0.47 Score=43.67 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=30.0
Q ss_pred CCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 192 SKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 192 ~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+. .++.++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~ 46 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPA 46 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcch
Confidence 36899999988 7899999999999999 7777 444443
No 443
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.54 E-value=0.21 Score=44.55 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=48.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-H---hCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-K---AFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l-~---~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |.+|..+++.+...|+ +++.+.+ +.++.+.+ + ..+... .+ |..+ ..++.+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999998 9999999998888998 6766544 44443322 2 223322 22 3331 233333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 478999999873
No 444
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.54 E-value=0.32 Score=43.20 Aligned_cols=101 Identities=20% Similarity=0.285 Sum_probs=65.3
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~- 260 (378)
..+...-++||-+|.+ +|..++.+|+.+ +. +++.++.+++..+.+++ .|...-+... ..+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~ 149 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIE 149 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHh
Confidence 3445566789888873 577888888876 44 89999999988776644 5643333222 233444555543
Q ss_pred ----CCCccEEE-eccCC--hHHHHHHHHHhccCCccEEE
Q 017052 261 ----DGGADYSF-ECIGD--TGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 261 ----~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~ 293 (378)
.+.||+|| |+--. ...++.++++++++ |.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 24799988 44322 34577888999986 76654
No 445
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.54 E-value=0.31 Score=44.41 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=66.0
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+. |.+..++ -.|++|.|+|. +.+|.-++.++...|+ .|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45665444443 3466665 47999999998 5999999999999999 8888854322
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+..+.++ ..|+|+-++|.+..+...+ ++++ ..++++|..
T Consensus 195 ~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1222222 4799999999876665554 7776 788888754
No 446
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.51 E-value=0.19 Score=44.98 Aligned_cols=79 Identities=22% Similarity=0.323 Sum_probs=49.3
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HHHhCCCc-E--EeCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP--EKCE-KAKAFGVT-E--FLNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~-~l~~~g~~-~--vi~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++. +..+ ..++++.. . ..|..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 5789999985 6899999998888999 888887653 3223 33334431 1 223331 233333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998864
No 447
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.47 E-value=0.38 Score=37.82 Aligned_cols=92 Identities=18% Similarity=0.360 Sum_probs=49.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHH-cCCCeEEE-EcCChh---hHHHHHhCCCc--EEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKA-RGASRIIG-VDTNPE---KCEKAKAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~-v~~~~~---~~~~l~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
+|.|+|+ |-+|+.+++.+.. -+. ++.+ ++++++ ..+.-+-.|.. .+..+ .++ .++.. .+|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~l----~~~~~-~~DVv 71 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DDL----EELLE-EADVV 71 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-H----HHHTT-H-SEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc----hhH----HHhcc-cCCEE
Confidence 6899999 9999999999988 577 5544 444441 11111111111 11111 122 22222 27999
Q ss_pred EeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 268 FECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 268 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
||++. ++.....++.+.+. |.-+.+|.+.-
T Consensus 72 IDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 72 IDFTN-PDAVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp EEES--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred EEcCC-hHHhHHHHHHHHhC-CCCEEEECCCC
Confidence 99984 46666666666554 77777776553
No 448
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.47 E-value=0.45 Score=44.86 Aligned_cols=97 Identities=15% Similarity=0.241 Sum_probs=62.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEc--CChhh-HHHHHhCCCcEEeCCCCC-CchH--------------H
Q 017052 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVD--TNPEK-CEKAKAFGVTEFLNPNDN-NEPV--------------Q 253 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~--~~~~~-~~~l~~~g~~~vi~~~~~-~~~~--------------~ 253 (378)
++|.|+|+ |.+|..+++..+.. .. +|+++. ++.++ .+.++++++..+...++. ...+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899997 99999999988765 45 777774 34433 345667888876654310 0011 1
Q ss_pred HHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEE
Q 017052 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 254 ~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
+.+.++... .+|+|+.+++|...+...+.+++.+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122233333 6899999998876777888888763 44443
No 449
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.45 E-value=0.21 Score=47.13 Aligned_cols=80 Identities=26% Similarity=0.319 Sum_probs=48.7
Q ss_pred CCCCeEEEEcc-ChHHHH--HHHHHHHcCCCeEEEEcCCh---h-------------hHHHHHhCCCcE-Ee--CCCCCC
Q 017052 192 SKGSTVVIFGL-GTVGLS--VAQGAKARGASRIIGVDTNP---E-------------KCEKAKAFGVTE-FL--NPNDNN 249 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~--aiqla~~~g~~~vi~v~~~~---~-------------~~~~l~~~g~~~-vi--~~~~~~ 249 (378)
..++++||+|+ +++|++ .++.+ ..|+ .++++.... + -.+.+++.|... .+ |.. ++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVs-s~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAF-SD 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCC-CH
Confidence 45689999988 899999 45556 8899 777776322 1 123455666543 23 332 12
Q ss_pred chHHHHHHHHhC--CCccEEEeccCCh
Q 017052 250 EPVQQVIKRITD--GGADYSFECIGDT 274 (378)
Q Consensus 250 ~~~~~~i~~~~~--~~~d~vid~~g~~ 274 (378)
+...+.+..+.. |++|+++++++.+
T Consensus 116 E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 333333333322 4799999998864
No 450
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.43 E-value=0.5 Score=43.18 Aligned_cols=43 Identities=23% Similarity=0.345 Sum_probs=37.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
+|.|+|.|.+|..++..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 47788999999999888888898 89999999999988887765
No 451
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=94.43 E-value=0.099 Score=45.75 Aligned_cols=72 Identities=13% Similarity=0.233 Sum_probs=47.9
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
|||+|+ |-+|..++..+...|. .|+++.+++........ .+...+ .+.. +...+.+.+... .+|.||.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~-~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLT-DKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETT-SHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecc-cccccccccccc---CceEEEEeecc
Confidence 789998 9999999999999999 78888777766654433 333222 2332 122233333322 78999999885
No 452
>PLN02686 cinnamoyl-CoA reductase
Probab=94.40 E-value=0.23 Score=47.10 Aligned_cols=45 Identities=18% Similarity=0.172 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
...+++|||+|+ |.+|..++..+...|+ +|+++.++.++.+.++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 355789999988 9999999999999999 88887777665544443
No 453
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.40 E-value=0.65 Score=41.53 Aligned_cols=96 Identities=19% Similarity=0.214 Sum_probs=66.2
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh-CCC
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGG 263 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~-~~~ 263 (378)
.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. . +. .++. .+.
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~----~~~~~~~~ 89 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DV----RDWKPKPD 89 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Ch----hhCCCCCC
Confidence 3556677889999998864 66777777765 56 899999999998888876543322 1 11 1111 237
Q ss_pred ccEEEeccC-----C-hHHHHHHHHHhccCCccEEEe
Q 017052 264 ADYSFECIG-----D-TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 264 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 294 (378)
||+|+-... . ...+..+.+.|+++ |+++..
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999886432 1 34577888899997 998764
No 454
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.39 E-value=0.26 Score=43.33 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=47.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH-HHh---CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK-AKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~-l~~---~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |.+|..++..+...|+ +++++.+ +.++.+. ..+ .+... . .|..+ ..++.+.+.++. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 47899988 9999999999999999 7877766 4443332 222 22211 2 23331 233333343332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 455
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.34 E-value=0.21 Score=42.70 Aligned_cols=98 Identities=12% Similarity=0.190 Sum_probs=58.3
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+.....++.+||-+|+| .|..++.+|+ .|. +|++++.++.-.+.+++. +... ... ..+... ..+ .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~--~~d~~~--~~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTD--AYDINA--AAL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeE--eccchh--ccc-cC
Confidence 34445556789999875 3666666666 477 899999999877766442 3221 110 001100 011 23
Q ss_pred CccEEEeccC-----C---hHHHHHHHHHhccCCccEEEec
Q 017052 263 GADYSFECIG-----D---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 263 ~~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+|+|+...- . ...+..+.+.|+++ |+++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6899875421 1 24667788889997 9965553
No 456
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.34 E-value=0.43 Score=34.76 Aligned_cols=35 Identities=34% Similarity=0.569 Sum_probs=29.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
..+++++|.|+|.+|..+++.+...+..++...++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999886547777755
No 457
>PRK10637 cysG siroheme synthase; Provisional
Probab=94.33 E-value=0.19 Score=49.12 Aligned_cols=113 Identities=10% Similarity=0.009 Sum_probs=69.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.|++|||+|+|.++.-=++.+...|+ +|+++...- +....+.+-|.-..+.-+ ... +.+ .++++||-++
T Consensus 11 ~~~~vlvvGgG~vA~rk~~~ll~~ga-~v~visp~~~~~~~~l~~~~~i~~~~~~-~~~---~dl-----~~~~lv~~at 80 (457)
T PRK10637 11 RDRDCLLVGGGDVAERKARLLLDAGA-RLTVNALAFIPQFTAWADAGMLTLVEGP-FDE---SLL-----DTCWLAIAAT 80 (457)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-CCh---HHh-----CCCEEEEECC
Confidence 68899999999999887788888899 787774421 122222223322222111 011 111 2789999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+..+.-......+... |.+++..+.....++-++...-..++++
T Consensus 81 ~d~~~n~~i~~~a~~~-~~lvN~~d~~~~~~f~~pa~~~~g~l~i 124 (457)
T PRK10637 81 DDDAVNQRVSEAAEAR-RIFCNVVDAPKAASFIMPSIIDRSPLMV 124 (457)
T ss_pred CCHHHhHHHHHHHHHc-CcEEEECCCcccCeEEEeeEEecCCEEE
Confidence 8866655666666665 8999887766555666555442234444
No 458
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.31 E-value=0.17 Score=50.28 Aligned_cols=71 Identities=23% Similarity=0.316 Sum_probs=48.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.++++||+|+|++|.+++..+...|+ +|+.+.++.++.+.+. .++. ..+.+. ++ .+......|++++|+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~-~~~~~~----~~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGG-QALTLA----DL----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceeeHh----Hh----hhhccccCeEEEecc
Confidence 46889999999999999999999999 8999999887766554 3432 222221 11 111112568899887
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 53
No 459
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.31 E-value=0.3 Score=49.13 Aligned_cols=75 Identities=15% Similarity=0.289 Sum_probs=56.7
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
++++|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+.-.. .-.+.+++..-..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~----~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNA----ANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCC----CCHHHHHhcCccccCEEEEEcCCh
Confidence 678999999999999999999998 899999999999999998876655321 112334433223788887776653
No 460
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.23 E-value=0.46 Score=44.25 Aligned_cols=86 Identities=24% Similarity=0.264 Sum_probs=56.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|.+|.|+|.|.+|..+++.++..|. +|++.+++.+...... .+ ..++.+.+. ..|+|+-+..
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~~--------~~---~~~l~ell~-----~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDFL--------TY---KDSVKEAIK-----DADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhhh--------hc---cCCHHHHHh-----cCCEEEEeCC
Confidence 57899999999999999999999999 9999988765432110 01 112222222 4688877776
Q ss_pred ChH-----HHHHHHHHhccCCccEEEecc
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .....+..|+++ ..+|.++-
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 432 123455667765 66666653
No 461
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.22 E-value=0.3 Score=49.73 Aligned_cols=78 Identities=21% Similarity=0.382 Sum_probs=58.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
.++|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+.-.. .+. +.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDa-t~~---~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDA-TRM---DLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeC-CCH---HHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999998875544211 122 23333322378999989887
Q ss_pred hHH
Q 017052 274 TGM 276 (378)
Q Consensus 274 ~~~ 276 (378)
++.
T Consensus 475 ~~~ 477 (621)
T PRK03562 475 PQT 477 (621)
T ss_pred HHH
Confidence 543
No 462
>PRK05855 short chain dehydrogenase; Validated
Probab=94.21 E-value=0.2 Score=50.33 Aligned_cols=79 Identities=20% Similarity=0.337 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.+.++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ..|... . .|..+ .....+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999998 9999999999989999 7999999887665432 334322 2 24431 223333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 78999999874
No 463
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.19 E-value=0.37 Score=42.04 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=60.4
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeC-------CCCCCch-HHHHHHHH-
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLN-------PNDNNEP-VQQVIKRI- 259 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~-------~~~~~~~-~~~~i~~~- 259 (378)
...++.+||+.|+| .|.-++.||. .|. .|++++.++...+.+. +.+...... +....-. +...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 45677899999886 4788888875 699 8999999999887652 233221000 0000000 00001111
Q ss_pred --hCCCccEEEeccC--------ChHHHHHHHHHhccCCccEEEe
Q 017052 260 --TDGGADYSFECIG--------DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 --~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||.|+|... -...+..+.++|+++ |+++.+
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1126899999653 124577888899997 875554
No 464
>PRK12744 short chain dehydrogenase; Provisional
Probab=94.17 E-value=0.25 Score=44.03 Aligned_cols=79 Identities=24% Similarity=0.374 Sum_probs=46.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHH----HHHhCCCcE-E--eCCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~----~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~ 260 (378)
.++++||+|+ |++|..+++.+...|+ +++.+.++. ++.+ .++..+... . .|..+ ..+..+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~ 84 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT-AAAVEKLFDDAK 84 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC-HHHHHHHHHHHH
Confidence 4689999988 9999999999988999 655554322 2221 122234322 2 23331 233333333332
Q ss_pred --CCCccEEEeccCC
Q 017052 261 --DGGADYSFECIGD 273 (378)
Q Consensus 261 --~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 85 ~~~~~id~li~~ag~ 99 (257)
T PRK12744 85 AAFGRPDIAINTVGK 99 (257)
T ss_pred HhhCCCCEEEECCcc
Confidence 2378999998874
No 465
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.17 E-value=0.26 Score=45.66 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=31.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~ 231 (378)
.+++|||+|+ |.+|..++..+...|+ +|+++.++.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 4789999988 9999999999988999 788777765543
No 466
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.15 E-value=0.36 Score=45.43 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
-..+.+|||+|+ |.+|..+++.+...|. +|+++.++.++..
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~ 48 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSL 48 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHH
Confidence 456789999987 9999999999988999 8888877766544
No 467
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.13 E-value=0.27 Score=43.61 Aligned_cols=79 Identities=15% Similarity=0.294 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH-HhC---CCcE-Ee--CCCCCCchHHHHHHHHh---
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA-KAF---GVTE-FL--NPNDNNEPVQQVIKRIT--- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~l-~~~---g~~~-vi--~~~~~~~~~~~~i~~~~--- 260 (378)
.+++++|+|+ |.+|..+++.+...|+ +|+. ..++.++.+.+ ..+ +... ++ |..+ ..++.+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 4679999998 9999999998888898 6765 45666554322 222 2221 22 3331 233433333322
Q ss_pred ----C-CCccEEEeccCC
Q 017052 261 ----D-GGADYSFECIGD 273 (378)
Q Consensus 261 ----~-~~~d~vid~~g~ 273 (378)
. +++|++|.+.|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999988874
No 468
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.22 Score=51.12 Aligned_cols=79 Identities=28% Similarity=0.349 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..++..+...|+ +|+++++++++.+.+. ..+... + .|..+ ..++.+.+.+.. .+
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 3678999998 9999999998888899 8999999887755432 223322 2 23331 233444444332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 469
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.11 E-value=0.33 Score=44.01 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=46.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CC---cEE--eCCCCCCchHHHHHHHHhCC-Cc
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GV---TEF--LNPNDNNEPVQQVIKRITDG-GA 264 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~---~~v--i~~~~~~~~~~~~i~~~~~~-~~ 264 (378)
|||+|+ |.+|..+++-+...+.++++.+++++.++..++. + .. ... ...- +-.-.+.+.++... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vig--Dvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIG--DVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CT--SCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceee--cccCHHHHHHHHhhcCC
Confidence 799988 9999999999888898799999999988776644 4 11 111 1111 22234455655555 89
Q ss_pred cEEEeccC
Q 017052 265 DYSFECIG 272 (378)
Q Consensus 265 d~vid~~g 272 (378)
|+||.+..
T Consensus 79 diVfHaAA 86 (293)
T PF02719_consen 79 DIVFHAAA 86 (293)
T ss_dssp SEEEE---
T ss_pred CEEEEChh
Confidence 99999764
No 470
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.07 E-value=0.34 Score=47.74 Aligned_cols=69 Identities=29% Similarity=0.377 Sum_probs=48.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-----KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-----~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.+++|+|+|+|.+|+.++.+++..|. +|++++.++. ..+.+++.|+....... .. ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~--~~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPG--PT---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCC--cc---------ccCCCCEE
Confidence 57799999999999999999999999 8988875542 23456677876554332 11 01156777
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+.+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 777664
No 471
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.07 E-value=0.72 Score=41.87 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=56.6
Q ss_pred eEEEEccChHHHHH-HHHHHHcCCCeEEEE-cCChhh--HHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 196 TVVIFGLGTVGLSV-AQGAKARGASRIIGV-DTNPEK--CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 196 ~VLI~Gag~vG~~a-iqla~~~g~~~vi~v-~~~~~~--~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|.|+|+|.+|... ..+.+.-+. ++.++ +.++++ ++.++++|...... ++...+. ...+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhc---CCCCCEEEECC
Confidence 68899999999866 455555566 66655 444443 46677888765431 2222222 13799999999
Q ss_pred CChHHHHHHHHHhccCCccEEEecc
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+.....+.+..++.. |+.+....
T Consensus 73 p~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEECC
Confidence 987666666666665 66555433
No 472
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.06 E-value=0.28 Score=43.42 Aligned_cols=76 Identities=22% Similarity=0.223 Sum_probs=46.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |++|..+++.+...|+ +++.+ .+++++.+. ++..+... .+ |.. +..++.+.+.++. .++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVA-NEADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccC-CHHHHHHHHHHHHHhcCC
Confidence 57999998 9999999999988998 66554 455554332 22233222 22 332 1233444444332 237
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|.+.|
T Consensus 81 id~li~~ag 89 (248)
T PRK06947 81 LDALVNNAG 89 (248)
T ss_pred CCEEEECCc
Confidence 899998887
No 473
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.06 E-value=0.33 Score=39.97 Aligned_cols=95 Identities=20% Similarity=0.325 Sum_probs=54.9
Q ss_pred hhhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 172 CLLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
..+||+....+..| +..++ -.|++|+|+|. ..+|.-+..++...|+ .|+...+..+
T Consensus 14 ~~~PcTp~aii~lL-~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T~-------------------- 71 (160)
T PF02882_consen 14 GFVPCTPLAIIELL-EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKTK-------------------- 71 (160)
T ss_dssp SS--HHHHHHHHHH-HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTSS--------------------
T ss_pred CCcCCCHHHHHHHH-HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCCC--------------------
Confidence 44555444444434 55554 57999999998 6799999999999999 8887755421
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+|+.++|.+..+. ...++++ ..++++|..
T Consensus 72 -~l~~~~~-----~ADIVVsa~G~~~~i~--~~~ik~g-avVIDvG~~ 110 (160)
T PF02882_consen 72 -NLQEITR-----RADIVVSAVGKPNLIK--ADWIKPG-AVVIDVGIN 110 (160)
T ss_dssp -SHHHHHT-----TSSEEEE-SSSTT-B---GGGS-TT-EEEEE--CE
T ss_pred -cccceee-----eccEEeeeeccccccc--cccccCC-cEEEecCCc
Confidence 2222222 4799999998865433 3356775 778887654
No 474
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.04 E-value=0.44 Score=43.05 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=65.1
Q ss_pred hhchhhhhhHHHHHhhcCCC-CCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~-~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+. |.+..++. .|++|+|+|.| .+|.-++.++...|+ .|+...+. ..
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~---------------------t~ 192 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL---------------------TK 192 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC---------------------cH
Confidence 45655444444 34666664 79999999985 899999999999999 78776321 11
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+|+-++|.+..+. -..++++ ..++++|...
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~~ 232 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGINR 232 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeeccc
Confidence 2333333 4799999999876543 3356776 8888888643
No 475
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.04 E-value=0.27 Score=45.78 Aligned_cols=93 Identities=18% Similarity=0.231 Sum_probs=59.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
-.+++|+|+|| |.+|..+++.+.. .|..+++.+.++.++.+.+.. ++... -.++.+.+ ...|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~-------i~~l~~~l-----~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK-------ILSLEEAL-----PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc-------HHhHHHHH-----ccCCEEE
Confidence 46789999999 8999999988864 566689999998877766543 32111 11222222 1589999
Q ss_pred eccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 269 ECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.+++.+.....-...+.++ -.+++++.+
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYP 248 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence 9888644321112344554 566676654
No 476
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.01 E-value=0.47 Score=43.46 Aligned_cols=44 Identities=27% Similarity=0.418 Sum_probs=37.5
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 368899999999988888888888 89999999998887777665
No 477
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.01 E-value=0.13 Score=45.68 Aligned_cols=106 Identities=22% Similarity=0.266 Sum_probs=63.0
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcE-E-eCCCCC-CchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDN-NEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~-v-i~~~~~-~~~~~~~i 256 (378)
+....++.||++||=-|.| .|.+...+|+..| ..+|+..+.++++.+.+++ +|... + +...+- ...+.+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~-- 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDE-- 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--ST--
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccc--
Confidence 4467899999999887653 2555666666554 2289999999998877754 56543 2 211110 111100
Q ss_pred HHHhCCCccEEE-eccCChHHHHHHHHHh-ccCCccEEEecc
Q 017052 257 KRITDGGADYSF-ECIGDTGMITTALQSC-CDGWGLAVTLGV 296 (378)
Q Consensus 257 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 296 (378)
. ....+|.|| |--.--..+..+.+.| +++ |+++.+.-
T Consensus 109 -~-~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 -E-LESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp -T--TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred -c-ccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 0 113678766 6655446889999999 786 99998853
No 478
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.00 E-value=0.66 Score=41.91 Aligned_cols=101 Identities=15% Similarity=0.170 Sum_probs=60.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc--EEeCCCC---CCchHHHHHHHHhCCCccE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNPND---NNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~--~vi~~~~---~~~~~~~~i~~~~~~~~d~ 266 (378)
+..++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ...+... ...+..+.+++ ..+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 3456999998854 44556667766555899999998887777663110 0000000 01122333333 2348998
Q ss_pred EE-ecc---C------ChHHHHHHHHHhccCCccEEEec
Q 017052 267 SF-ECI---G------DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 267 vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
|+ |.. + ..+.++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 77 442 1 124456788899997 9988763
No 479
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.00 E-value=0.6 Score=37.53 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=63.1
Q ss_pred hhchhhhhhHHHHHhhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+|+....... |.+..++. .|++|+|+|. ..+|.-++.++...|+ .|+.+.++..
T Consensus 7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~--------------------- 63 (140)
T cd05212 7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI--------------------- 63 (140)
T ss_pred ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence 34444333333 34555654 7999999998 7899999999999998 8888865321
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+|+-++|.+..+. -..++++ ..++.+|...
T Consensus 64 ~l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 64 QLQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred CHHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 2222232 4799999999864433 4457875 7777766543
No 480
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.98 E-value=0.16 Score=45.32 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=51.4
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 273 (378)
+|||.|+.+-|..++..+...|. +|+++.+++...+.+...|...++.-..+..+ +.++... ++|+|+|++..
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGALDPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCCCHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999884459999988888898 89999899988888877765555422211222 3333333 89999999864
No 481
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=93.96 E-value=0.6 Score=42.65 Aligned_cols=93 Identities=16% Similarity=0.187 Sum_probs=55.0
Q ss_pred CeEEEEccChHHHHHHH-HHHHcCCCeEEEE-cCChh--hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGLGTVGLSVAQ-GAKARGASRIIGV-DTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiq-la~~~g~~~vi~v-~~~~~--~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-+|.|+|.|.+|...+. +.+.-+. ++.++ +.+++ .+..++++|..... .++...+.......+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 47899999999997554 4444466 66655 44443 34667778864432 123333332111369999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEecc
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
++.....+.+..+... |..+....
T Consensus 78 T~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 78 TSAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEECC
Confidence 9986555555555554 55554433
No 482
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.96 E-value=0.75 Score=41.14 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=59.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.++.+||-+|+| .|..+..+++. |. +|++++.+++..+.+++ .|.. .++.. +.. .+.....+.+
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-----d~~-~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-----AAQ-DIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-----CHH-HHhhhcCCCC
Confidence 456788888875 36777777775 77 89999999998887765 2321 12211 111 1222223479
Q ss_pred cEEEecc-----CC-hHHHHHHHHHhccCCccEEEe
Q 017052 265 DYSFECI-----GD-TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 265 d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|+|+-.. .. ...+..+.+.|+++ |+++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9988432 12 24577888999997 998765
No 483
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=93.96 E-value=0.14 Score=47.93 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.++++|||+|+ |.+|..+++.+...|. +|++++++.+
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~ 41 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSS 41 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccc
Confidence 35789999988 9999999999999999 8988877543
No 484
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=93.95 E-value=0.35 Score=42.53 Aligned_cols=77 Identities=17% Similarity=0.265 Sum_probs=47.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCC---Cc-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFG---VT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g---~~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |.+|..+++.+...|. +|+.++++.+ ..+..+.+. .. .++ |..+ ..++.+.+.... .++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD-TEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 47899987 9999999998888898 8999888743 222222222 11 122 3321 233333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 485
>PRK06153 hypothetical protein; Provisional
Probab=93.94 E-value=0.67 Score=43.65 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=30.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|-.++..+..+|..+++.++.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999888888764
No 486
>PRK08223 hypothetical protein; Validated
Probab=93.93 E-value=0.3 Score=44.18 Aligned_cols=36 Identities=28% Similarity=0.258 Sum_probs=31.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
...+|+|+|+|++|..+++.+..+|..++..++.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 467899999999999999999999998888887653
No 487
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.93 E-value=0.38 Score=42.57 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=46.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH-HhCCCcE-Ee--CCCCCCchHHHHHHHH---hCCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRI---TDGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l-~~~g~~~-vi--~~~~~~~~~~~~i~~~---~~~~ 263 (378)
.++++||+|+ |.+|..++..+...|+ +|+.+. ++.++.+.+ ..++... .+ |..+ ..++.+.+.+. .+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3578999988 9999999999888999 676654 344444333 3343221 22 3331 22333333332 2224
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|.+.|
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 899998875
No 488
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.93 E-value=0.37 Score=48.84 Aligned_cols=93 Identities=12% Similarity=0.143 Sum_probs=65.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
++|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++-. ..-.+.+++.--..+|.++-+++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GD----at~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGD----ATQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEee----CCCHHHHHhcCCccCCEEEEEeCCH
Confidence 578999999999999999999999 89999999999999999887654421 1122234433223789999998875
Q ss_pred HHHHH---HHHHhccCCccEEE
Q 017052 275 GMITT---ALQSCCDGWGLAVT 293 (378)
Q Consensus 275 ~~~~~---~~~~l~~~~G~~v~ 293 (378)
+.-.. ..+...++ .+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 43322 23444454 45543
No 489
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.92 E-value=0.43 Score=43.12 Aligned_cols=94 Identities=17% Similarity=0.285 Sum_probs=65.7
Q ss_pred hhchhhhhhHHHHHhhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
..||+....+..| +..++. .|++|+|+|- ..+|.-+..++...|+ .|+...+.. .
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------~ 194 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC---------------------C
Confidence 3565544444433 666654 6999999998 5599999999999999 888775431 1
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+++.++|.+..+.. ..++++ ..++++|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2333333 57999999998765443 667886 888888854
No 490
>PRK05599 hypothetical protein; Provisional
Probab=93.92 E-value=0.38 Score=42.70 Aligned_cols=75 Identities=17% Similarity=0.315 Sum_probs=47.7
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCc--EEe--CCCCCCchHHHHHHHHh--CCCc
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--EFL--NPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~--~vi--~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
++||+|+ +++|.+++..+. .|. +|+.+++++++.+.+ ++.+.. ..+ |..+ ..+..+.+.+.. .+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence 6899988 899999988766 487 888888888776544 233432 222 3332 233333333332 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999988774
No 491
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.91 E-value=0.76 Score=38.89 Aligned_cols=97 Identities=21% Similarity=0.268 Sum_probs=61.4
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~~ 260 (378)
....+.++.+||=+|+|. |..++.+++.....++++++.+++..+.+++ ++... ++.. + .... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d--~~~~----~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---E--APIE----L 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---C--chhh----c
Confidence 445677889999888753 6666666766533389999999987776654 34322 2221 1 1111 1
Q ss_pred CCCccEEEeccC-C--hHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIG-D--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g-~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+|+.... . ...+..+.+.|+++ |+++..
T Consensus 95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 237899885332 1 23567788899997 988764
No 492
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.89 E-value=0.38 Score=44.14 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=56.1
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC-CchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN-NEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|+|+|+|.+|..++..+...|. +|+.+++++++.+.+++.|... -+-+.. ........... ..+|+||-++...
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~d~vila~k~~ 77 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL-EDGEITVPVLAADDPAEL--GPQDLVILAVKAY 77 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc-cCCceeecccCCCChhHc--CCCCEEEEecccc
Confidence 58999999999999988888898 8999988888877777655421 000000 00000001111 3789999998764
Q ss_pred HHHHHHHHH----hccCCccEEEe
Q 017052 275 GMITTALQS----CCDGWGLAVTL 294 (378)
Q Consensus 275 ~~~~~~~~~----l~~~~G~~v~~ 294 (378)
. +..+++. +.++ ..++.+
T Consensus 78 ~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 78 Q-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred c-HHHHHHHHhhhcCCC-CEEEEe
Confidence 2 3444433 3333 455554
No 493
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.88 E-value=0.55 Score=45.51 Aligned_cols=102 Identities=11% Similarity=0.113 Sum_probs=61.1
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHH
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~ 259 (378)
...++++|++||=.|+|+ |-.++.+++.++..+|++++.++++.+.++ ++|... + .+.+ ...... . .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d--~~~~~~-~--~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGD--GRGPSQ-W--A 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccc--cccccc-c--c
Confidence 445678999999987642 333334455444238999999999877654 466652 2 2211 111100 0 0
Q ss_pred hCCCccEEE-e--ccCCh-------------------------HHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSF-E--CIGDT-------------------------GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||.|| | |+|.. ..+..+++.++++ |+++...
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvyst 368 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYAT 368 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 123699887 4 45421 3567788899997 9988653
No 494
>PRK12827 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.41 Score=42.18 Aligned_cols=79 Identities=22% Similarity=0.231 Sum_probs=47.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC----ChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT----NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~----~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~ 260 (378)
.++++||+|+ |.+|+.++..+...|+ +++.+++ +.++.+.+ +..+... ++ |.. +...+...+..+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~ 82 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVR-DFAATRAALDAGV 82 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHH
Confidence 4678999998 9999999998888999 7777554 22332222 2223222 22 332 1223333333322
Q ss_pred --CCCccEEEeccCC
Q 017052 261 --DGGADYSFECIGD 273 (378)
Q Consensus 261 --~~~~d~vid~~g~ 273 (378)
.+++|.+|.+.|.
T Consensus 83 ~~~~~~d~vi~~ag~ 97 (249)
T PRK12827 83 EEFGRLDILVNNAGI 97 (249)
T ss_pred HHhCCCCEEEECCCC
Confidence 1378999998874
No 495
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=93.82 E-value=0.79 Score=40.40 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=29.1
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|||+|+|++|..++..+..+|..+++.++.+.
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDT 33 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999999998888887643
No 496
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.81 E-value=0.22 Score=46.29 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=46.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhCCCc--EEe--CCCCCCchHHHHHHHHhCCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGVT--EFL--NPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l-~~~g~~--~vi--~~~~~~~~~~~~i~~~~~~~~d 265 (378)
.|++|||+|+ |.+|..+++.+...| ..+|++++++..+...+ +.+... .++ |.. +. +.+.+... ++|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~--d~---~~l~~~~~-~iD 76 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVR--DK---ERLTRALR-GVD 76 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCC--CH---HHHHHHHh-cCC
Confidence 4789999988 999999998877665 22788888776654333 223211 122 333 22 12222222 589
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+||.+.+.
T Consensus 77 ~Vih~Ag~ 84 (324)
T TIGR03589 77 YVVHAAAL 84 (324)
T ss_pred EEEECccc
Confidence 99998763
No 497
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=93.79 E-value=0.36 Score=42.50 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=48.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |.+|..+++.+...|+ +|++ ..+++++.+. ++..+... . .|..+ ...+.+.+.+.. .++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence 47899998 9999999999888999 6765 4566554332 22333322 2 23331 333444444432 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 498
>PRK07411 hypothetical protein; Validated
Probab=93.79 E-value=0.37 Score=46.06 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
...+|||+|+|++|..+++.+..+|..+++.++.+.
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 356899999999999999999999998888887643
No 499
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.79 E-value=0.39 Score=42.81 Aligned_cols=80 Identities=18% Similarity=0.248 Sum_probs=48.8
Q ss_pred CCCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCC-----------hhh----HHHHHhCCCcE-E--eCCCCCCc
Q 017052 192 SKGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTN-----------PEK----CEKAKAFGVTE-F--LNPNDNNE 250 (378)
Q Consensus 192 ~~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~-----------~~~----~~~l~~~g~~~-v--i~~~~~~~ 250 (378)
-+|+++||+|++ ++|..++..+...|+ +|+.+.++ .++ .+.+++.|... . .|.+ +.+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT-QND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC-CHH
Confidence 367899999883 799999999999999 77776421 111 12233445433 2 2333 233
Q ss_pred hHHHHHHHHhC--CCccEEEeccCC
Q 017052 251 PVQQVIKRITD--GGADYSFECIGD 273 (378)
Q Consensus 251 ~~~~~i~~~~~--~~~d~vid~~g~ 273 (378)
+..+.+.+... +.+|++|.+.|.
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 44444444332 368999988763
No 500
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=93.78 E-value=0.11 Score=46.15 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=46.2
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
|+|+|+ |.+|..+++.++..|. +|+.+.|++.+.+........ .. +.+.+....++|+||+-.|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-~v~iltR~~~~~~~~~~~~v~---~~--------~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-QVTILTRRPPKASQNLHPNVT---LW--------EGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-eEEEEEcCCcchhhhcCcccc---cc--------chhhhcccCCCCEEEECCCCc
Confidence 578988 9999999999999998 899998988877654332211 11 122222222689999988864
Done!