Query 017057
Match_columns 378
No_of_seqs 126 out of 165
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 08:13:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017057.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017057hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gqea_ e.38.1.1 (A:) Polypept 43.6 61 0.0045 29.2 10.2 33 187-219 6-40 (362)
2 d1io1a_ e.32.1.1 (A:) Phase 1 32.8 41 0.003 28.5 6.8 33 249-295 49-81 (395)
3 d2azeb1 e.63.1.2 (B:201-301) T 31.7 38 0.0028 25.2 5.5 28 253-280 3-30 (101)
4 d1nlwa_ a.38.1.1 (A:) Mad prot 22.9 1.1E+02 0.0079 20.9 7.4 34 249-282 45-78 (79)
5 d2hgsa4 d.142.1.6 (A:3-201,A:3 20.5 4.9 0.00036 37.3 -2.2 32 144-175 313-369 (370)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 19.9 1.3E+02 0.0097 20.8 10.2 35 249-283 50-84 (88)
7 d2azeb1 e.63.1.2 (B:201-301) T 18.3 86 0.0063 23.0 5.1 38 249-286 6-43 (101)
8 d1xioa_ f.13.1.1 (A:) Sensory 15.4 2.7E+02 0.02 22.4 12.1 19 73-91 71-89 (226)
9 d1nkpb_ a.38.1.1 (B:) Max prot 15.1 1.7E+02 0.012 19.9 8.5 33 249-281 45-77 (83)
10 d1ydxa2 d.287.1.2 (A:194-374) 14.6 74 0.0054 24.1 4.2 22 251-272 153-174 (181)
No 1
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=43.56 E-value=61 Score=29.25 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhh
Q 017057 187 SEIKALERQLMQSIE--TCIAKKKKIILCQMEMDR 219 (378)
Q Consensus 187 ~dI~~~e~~l~~t~~--~l~~Kk~rl~~~~~~~~~ 219 (378)
.+|+.+.+++..... .+..||+|+..++.+++.
T Consensus 6 ~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsd 40 (362)
T d1gqea_ 6 NRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQ 40 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcC
Confidence 456666666655544 357788899999987664
No 2
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=32.78 E-value=41 Score=28.46 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=24.9
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHH
Q 017057 249 KEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQ 295 (378)
Q Consensus 249 ~~~~i~~Lq~EI~~Le~l~~~L~~el~~L~~~~~r~~~s~T~~Gr~~ 295 (378)
..++.+.+|.||+ +|+++..|.....++-|+.+
T Consensus 49 ~~~dr~ai~~E~~--------------~l~~ei~~ia~~T~fng~~L 81 (395)
T d1io1a_ 49 SQSDLDSIQAEIT--------------QRLNEIDRVSGQTQFNGVKV 81 (395)
T ss_dssp CHHHHHHHHHHHH--------------HHHHHHHHHHHHCCBTTBCT
T ss_pred CHHHHHHHHHHHH--------------HHHHHHHHHHHhCeeCCccc
Confidence 3456788999999 77777888777777777754
No 3
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.67 E-value=38 Score=25.18 Aligned_cols=28 Identities=14% Similarity=0.129 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017057 253 IKIMEAEVQALEELSKQLFLEIYELRQA 280 (378)
Q Consensus 253 i~~Lq~EI~~Le~l~~~L~~el~~L~~~ 280 (378)
+..|+.|++.|++.++.|=.-+..+++.
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~ 30 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQ 30 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666666666555544444443
No 4
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.94 E-value=1.1e+02 Score=20.85 Aligned_cols=34 Identities=24% Similarity=0.152 Sum_probs=26.9
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017057 249 KEQDIKIMEAEVQALEELSKQLFLEIYELRQAKE 282 (378)
Q Consensus 249 ~~~~i~~Lq~EI~~Le~l~~~L~~el~~L~~~~~ 282 (378)
..+.|..|+.++..++.-..+|..+..+|+.+.+
T Consensus 45 A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l~ 78 (79)
T d1nlwa_ 45 AKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLE 78 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4578999999999888888888888877776543
No 5
>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.49 E-value=4.9 Score=37.32 Aligned_cols=32 Identities=34% Similarity=0.588 Sum_probs=27.3
Q ss_pred ceecchhheeehhhHHH-------------------------HHHhhhccccccccc
Q 017057 144 FTIPQLVSRIGVIGVTV-------------------------MAVLAGFGAVNLPYS 175 (378)
Q Consensus 144 ~~~e~~lsRIgViGVtl-------------------------mAiLSGfGAVstPY~ 175 (378)
...+++++.+||-|+.+ .++-+|||++.+||-
T Consensus 313 ~~~~~~iSElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpyl 369 (370)
T d2hgsa4 313 ARVVQCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYP 369 (370)
T ss_dssp CEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEE
T ss_pred eeeccccccccccEEEEeCCCEEEEeccceEEEecCCCCCCCCCeecceecccCccc
Confidence 35679999999999876 588999999999983
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.91 E-value=1.3e+02 Score=20.77 Aligned_cols=35 Identities=23% Similarity=0.084 Sum_probs=26.3
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017057 249 KEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEA 283 (378)
Q Consensus 249 ~~~~i~~Lq~EI~~Le~l~~~L~~el~~L~~~~~r 283 (378)
..+.|..|+.++..|+.-..++-.+...|+.+.+.
T Consensus 50 A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 50 ATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999988888777777777776666543
No 7
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.27 E-value=86 Score=23.05 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=31.1
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017057 249 KEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAY 286 (378)
Q Consensus 249 ~~~~i~~Lq~EI~~Le~l~~~L~~el~~L~~~~~r~~~ 286 (378)
..+++..|++|-..|..+.+.+-.++.++....+..++
T Consensus 6 L~~El~~L~~~E~~LD~li~~~~~~L~~lted~~n~k~ 43 (101)
T d2azeb1 6 LTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRL 43 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhccC
Confidence 45788999999999999999999999888865555543
No 8
>d1xioa_ f.13.1.1 (A:) Sensory rhodopsin {Anabaena sp. PCC 7120 [TaxId: 103690]}
Probab=15.45 E-value=2.7e+02 Score=22.43 Aligned_cols=19 Identities=37% Similarity=0.635 Sum_probs=16.1
Q ss_pred hhhhhhHHhHHHHHHHHHH
Q 017057 73 ARVVNWKVDLFCLILLLVF 91 (378)
Q Consensus 73 ~R~~~W~~tL~~Ll~lLiv 91 (378)
.|+.-|-+|.|++++.+..
T Consensus 71 ~RYiDW~lTtPlll~~l~l 89 (226)
T d1xioa_ 71 ARYIDWMVTTPLLLLSLSW 89 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHH
Confidence 6999999999998886653
No 9
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.07 E-value=1.7e+02 Score=19.89 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=23.6
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017057 249 KEQDIKIMEAEVQALEELSKQLFLEIYELRQAK 281 (378)
Q Consensus 249 ~~~~i~~Lq~EI~~Le~l~~~L~~el~~L~~~~ 281 (378)
..+.|..|+.+...|+.-...+-.+...|+.+.
T Consensus 45 A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l 77 (83)
T d1nkpb_ 45 ATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788888888888877777666666665554
No 10
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=14.56 E-value=74 Score=24.12 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=10.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHHH
Q 017057 251 QDIKIMEAEVQALEELSKQLFL 272 (378)
Q Consensus 251 ~~i~~Lq~EI~~Le~l~~~L~~ 272 (378)
+.|..++++++.|+++++.|..
T Consensus 153 ~~i~~~~~~i~~l~~lk~~Ll~ 174 (181)
T d1ydxa2 153 QKLDQYKKELSSLTVIRDTLLK 174 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555554433
Done!