BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017058
(378 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545394|ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus communis]
gi|223546843|gb|EEF48340.1| chlorophyll synthase, putative [Ricinus communis]
Length = 535
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/377 (85%), Positives = 350/377 (92%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
MEALVNDRLL DR T+ T T S ST+ QSLD V+ + PRKSLNVSGPVQPY++ LKNF
Sbjct: 158 MEALVNDRLLPDRSTTETSHTSPSTSTAPQSLDTVQRRSPRKSLNVSGPVQPYHSHLKNF 217
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFSTDLKDDTM+P DCFEEPWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQ
Sbjct: 218 WYPVAFSTDLKDDTMIPIDCFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 277
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+TDGKCEKMPST+L NVKIKSLPCFEQEGMIW+WPG +PP AT+P L PP+G
Sbjct: 278 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFEQEGMIWVWPGSDPPAATLPSLQPPAG 337
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGW+VPSLV FLTPASGLQGYWD
Sbjct: 338 FHVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWTVPSLVTFLTPASGLQGYWD 397
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEG++TRQCATHLHQLHVCLPSSR+KTRLLYRMSL
Sbjct: 398 PYPIDMEFRPPCMVLSTIGISKPGKLEGKSTRQCATHLHQLHVCLPSSRQKTRLLYRMSL 457
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LKH+PFM+YLWRHFAEQVLNEDLRLV+GQQERM NGANVWNLPV YDKLGVRYRL
Sbjct: 458 DFAPLLKHIPFMEYLWRHFAEQVLNEDLRLVVGQQERMINGANVWNLPVTYDKLGVRYRL 517
Query: 361 WRDALEKGAKQLPFMKP 377
WRDA+E+GAKQ PF KP
Sbjct: 518 WRDAVERGAKQNPFSKP 534
>gi|356552681|ref|XP_003544691.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 534
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/374 (86%), Positives = 347/374 (92%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLLQDR T+ QT +SPSTS SL I K + PRKSLNVSGPVQ Y+ LKNF
Sbjct: 153 MEELVNDRLLQDRSTAEVAQTSSSPSTSANSLVIEKRRQPRKSLNVSGPVQSYHPHLKNF 212
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFS DLKDDTM+P +CFEEPWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQ
Sbjct: 213 WYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 272
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+TDGKCEKMPSTQ NVKIKS+PCFE+EGMIWIWPG++PPTAT+P LLPPSG
Sbjct: 273 CPYHGWEYTTDGKCEKMPSTQQLNVKIKSVPCFEREGMIWIWPGNDPPTATLPSLLPPSG 332
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV FLTPASGLQGYWD
Sbjct: 333 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWD 392
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPG+LEGQ+TR+C+THLHQLHVCLPSS++KTRLLYRMSL
Sbjct: 393 PYPIDMEFRPPCMVLSTIGISKPGRLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSL 452
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LKH+P M+YLWRHFAEQVLNEDLRLV+GQQERMNNGANVWN PV YDKLGVRYR+
Sbjct: 453 DFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRM 512
Query: 361 WRDALEKGAKQLPF 374
WRDALE+G KQLPF
Sbjct: 513 WRDALERGVKQLPF 526
>gi|224066823|ref|XP_002302233.1| predicted protein [Populus trichocarpa]
gi|222843959|gb|EEE81506.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/376 (86%), Positives = 349/376 (92%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLLQDR+ + DQ SPSTS QSLD VK K PRK+LNVSGPVQPY+ RLKNF
Sbjct: 95 MEELVNDRLLQDRNQAEPDQESPSPSTSTQSLDTVKRKSPRKNLNVSGPVQPYHPRLKNF 154
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFSTDLKDDTM+P DCFEEPWV+FRGKDG PGCV+NTCAHRACPLHLGSVNEGRIQ
Sbjct: 155 WYPVAFSTDLKDDTMIPIDCFEEPWVLFRGKDGKPGCVRNTCAHRACPLHLGSVNEGRIQ 214
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDGKCEKMPST+L +VK+KSLPCFEQEGMIWIWPG +PP A++P L PP G
Sbjct: 215 CPYHGWEYSTDGKCEKMPSTRLLDVKVKSLPCFEQEGMIWIWPGSDPPAASLPSLQPPPG 274
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F++HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGW+VPSLVKFLTPASGLQGYWD
Sbjct: 275 FQVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWTVPSLVKFLTPASGLQGYWD 334
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+CATHLHQLHVCLPSSR+KTRLLYRMSL
Sbjct: 335 PYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECATHLHQLHVCLPSSRQKTRLLYRMSL 394
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA VLKH PFM YLW+HFAEQVLNEDLRLVLGQQERM NGANVWN PV YDKLGVRYRL
Sbjct: 395 DFAGVLKHFPFMHYLWKHFAEQVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGVRYRL 454
Query: 361 WRDALEKGAKQLPFMK 376
WRDA+E+GAKQLPF K
Sbjct: 455 WRDAVERGAKQLPFRK 470
>gi|359492578|ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Vitis
vinifera]
gi|302141810|emb|CBI19013.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/378 (85%), Positives = 351/378 (92%), Gaps = 2/378 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSK--QSLDIVKGKLPRKSLNVSGPVQPYNTRLK 58
ME LVNDRLLQDR+T+ ++QT S S S SLD+VK KLP+KSLNVSGPVQPY+ RLK
Sbjct: 158 MEELVNDRLLQDRNTADSNQTSTSTSPSTSTASLDMVKRKLPQKSLNVSGPVQPYHPRLK 217
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVAFSTDLKDDTM+P DCFEEPWV+FRG+DG PGCV+NTCAHRACPLHLGSVNEGR
Sbjct: 218 NFWYPVAFSTDLKDDTMIPIDCFEEPWVVFRGQDGKPGCVRNTCAHRACPLHLGSVNEGR 277
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
IQCPYHGWEYSTDGKCEKMPST+L NVKIKSLPC EQEGMIWIWPG +PPTAT+P L PP
Sbjct: 278 IQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCLEQEGMIWIWPGSDPPTATLPSLQPP 337
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 238
GF+IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY
Sbjct: 338 PGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 397
Query: 239 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+T+QCATHLHQLHVCLPSSR KTRLLYRM
Sbjct: 398 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKQCATHLHQLHVCLPSSRDKTRLLYRM 457
Query: 299 SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
SLDFA VL+H+PFMQYLWR+FAE+VLNEDLRLVLGQQ+RM GANVWN PV YDKLGVRY
Sbjct: 458 SLDFAPVLQHIPFMQYLWRYFAEKVLNEDLRLVLGQQDRMLMGANVWNCPVSYDKLGVRY 517
Query: 359 RLWRDALEKGAKQLPFMK 376
RLWRDA+E+GAK+LPF +
Sbjct: 518 RLWRDAVERGAKRLPFTE 535
>gi|356549331|ref|XP_003543047.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/374 (85%), Positives = 346/374 (92%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLLQDR T+ QT +SPSTS SL K + PRKSLNVSGPVQ Y+ LKNF
Sbjct: 153 MEELVNDRLLQDRSTTDVAQTSSSPSTSANSLVTEKRRQPRKSLNVSGPVQSYHPHLKNF 212
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFS DLKDDTM+P +CFEEPWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQ
Sbjct: 213 WYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 272
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+TDGKCEKMPST+ NVKIKS+PCFE+EGMIWIWPG++PP AT+P +LPPSG
Sbjct: 273 CPYHGWEYTTDGKCEKMPSTRQLNVKIKSVPCFEKEGMIWIWPGNDPPAATLPSILPPSG 332
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV FLTPASGLQGYWD
Sbjct: 333 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWD 392
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+C+THLHQLHVCLPSS++KTRLLYRMSL
Sbjct: 393 PYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSL 452
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LKH+P M+YLWRHFAEQVLNEDLRLV+GQQERMNNGANVWN PV YDKLGVRYR+
Sbjct: 453 DFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRM 512
Query: 361 WRDALEKGAKQLPF 374
WRDALE+GAKQLPF
Sbjct: 513 WRDALERGAKQLPF 526
>gi|356509409|ref|XP_003523442.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 350/376 (93%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVND+LLQ+R T+ QT +SPSTS + +DI K + PRKSL++SGPVQ Y+ LKNF
Sbjct: 155 MEELVNDKLLQERSTTEVSQTSSSPSTSFKPVDIEKRRSPRKSLDISGPVQSYHPHLKNF 214
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFSTDLKDDTM+P +CFEEPWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQ
Sbjct: 215 WYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 274
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+TDGKCEKMPST+L NVKIKSLPCFE EGMIW+WPG++PPTAT+P LLPPSG
Sbjct: 275 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFETEGMIWVWPGNDPPTATLPSLLPPSG 334
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
FE+HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 335 FEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 394
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEGQ+T QCATHLHQLHVCLPSS++KTRLLYRMSL
Sbjct: 395 PYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSL 454
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA VLKH+PFMQ+LWR+FAEQVLNEDLRLVLGQQERMNNGANVWN PV YDKLG+RYRL
Sbjct: 455 DFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQERMNNGANVWNFPVSYDKLGIRYRL 514
Query: 361 WRDALEKGAKQLPFMK 376
WR+ALE+G KQ PF K
Sbjct: 515 WRNALERGNKQPPFSK 530
>gi|356515896|ref|XP_003526633.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/376 (85%), Positives = 351/376 (93%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVND+LLQ+R T+ QT +SPSTS + +D+ K + PRKSL++SGPVQ Y+T LKNF
Sbjct: 155 MEELVNDKLLQERTTTEVSQTSSSPSTSFKPVDVEKRRPPRKSLDISGPVQSYHTHLKNF 214
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFSTDLKDDTM+P +CFEEPWVIFRGKDG PGCVQNTCAHRACPLHLGSV EGRIQ
Sbjct: 215 WYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQ 274
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+TDGKCEKMPST+L NVKIKSLPCFE+EGMIW+WPG++PPTAT+P LLPPSG
Sbjct: 275 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPTATLPSLLPPSG 334
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
FE+HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 335 FEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 394
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEGQ+T QCATHLHQLHVCLPSS++KTRLLYRMSL
Sbjct: 395 PYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSL 454
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA VLKH+PFMQ+LWR+FAEQVLNEDLRLVLGQQERMNNGANVWN PV YDKLGVRYRL
Sbjct: 455 DFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQERMNNGANVWNFPVSYDKLGVRYRL 514
Query: 361 WRDALEKGAKQLPFMK 376
WR+ALE+G KQ PF K
Sbjct: 515 WRNALEQGTKQPPFSK 530
>gi|224082298|ref|XP_002306638.1| predicted protein [Populus trichocarpa]
gi|222856087|gb|EEE93634.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/374 (86%), Positives = 344/374 (91%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLLQDR+ + +DQ SPSTS QSLD VK K PRK+L VSGPVQPY+ LKNF
Sbjct: 158 MEELVNDRLLQDRNPAESDQASPSPSTSTQSLDTVKNKSPRKNLKVSGPVQPYHPHLKNF 217
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFSTDLKD TM+P DCFEEPWV+FRG DG PGCV+NTCAHRACPLHLGSVNEGR++
Sbjct: 218 WYPVAFSTDLKDGTMIPIDCFEEPWVLFRGMDGKPGCVRNTCAHRACPLHLGSVNEGRVR 277
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDGKCEKMPST+L NVKIKSLPCFEQEGMI +WPG +PP AT+P L PP G
Sbjct: 278 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEQEGMILVWPGSDPPAATLPSLQPPPG 337
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F++HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 338 FQVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 397
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+CATHLHQLHVCLPSSR KTRLLYRMSL
Sbjct: 398 PYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECATHLHQLHVCLPSSRHKTRLLYRMSL 457
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA VLKHVPFM YLWRHFAEQVLNEDLRLVLGQQERM NGANVWN PV YDKLGVRYRL
Sbjct: 458 DFAPVLKHVPFMHYLWRHFAEQVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGVRYRL 517
Query: 361 WRDALEKGAKQLPF 374
WRDA+EKGAKQLPF
Sbjct: 518 WRDAVEKGAKQLPF 531
>gi|449465447|ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
gi|449513335|ref|XP_004164299.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 534
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/374 (81%), Positives = 344/374 (91%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LV+DRLLQDR+T+ D P TS Q LD + P+KSLNVSGPV+PY+ RLKNF
Sbjct: 157 MEELVHDRLLQDRNTAELDSPSTLPGTSTQPLDSINRSSPKKSLNVSGPVEPYHPRLKNF 216
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFS+DLK+D M+PFDCFEEPWV+FRGKDG PGC++NTCAHRACPLHLGSVN+GR+Q
Sbjct: 217 WYPVAFSSDLKNDIMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQ 276
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDGKCEKMPST+L NVKIKSLPCFE+EGMIW+WPG++PP A +P L PP G
Sbjct: 277 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPAANLPSLKPPPG 336
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F+IHAE+V+E+P+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 337 FQIHAELVIEIPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 396
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+C+THLHQLHVCLPS+R+KTRLLYRMSL
Sbjct: 397 PYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQLHVCLPSTRQKTRLLYRMSL 456
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA VLK +PFM YLWRHFAEQVLNEDLRLV+GQQERM NGAN+WN+PV YDKLGVRYRL
Sbjct: 457 DFAPVLKQIPFMHYLWRHFAEQVLNEDLRLVIGQQERMVNGANIWNMPVSYDKLGVRYRL 516
Query: 361 WRDALEKGAKQLPF 374
WR+A+E+GAKQLPF
Sbjct: 517 WRNAVEEGAKQLPF 530
>gi|110289597|gb|ABB48003.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 526
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/376 (82%), Positives = 338/376 (89%), Gaps = 3/376 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLK 58
ME LVNDRLLQD +S + C S PSTS S +V K PR+SLNVSGPVQPYN LK
Sbjct: 144 METLVNDRLLQDGGSSASTAECTSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLK 202
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGR
Sbjct: 203 NFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGR 262
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
IQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPP
Sbjct: 263 IQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPP 322
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 238
SGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGY
Sbjct: 323 SGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGY 382
Query: 239 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
WDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRM
Sbjct: 383 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRM 442
Query: 299 SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
SLDFA +KHVPFM LW HFAE+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RY
Sbjct: 443 SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRY 502
Query: 359 RLWRDALEKGAKQLPF 374
RLWRDA+E+G +LPF
Sbjct: 503 RLWRDAIERGVDRLPF 518
>gi|115483526|ref|NP_001065433.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|75247969|sp|Q8S7E1.1|CAO_ORYSJ RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|18855011|gb|AAL79703.1|AC087599_22 putative chlorophyll synthase [Oryza sativa Japonica Group]
gi|110289596|gb|ABB48002.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639965|dbj|BAF27270.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|215694378|dbj|BAG89371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185043|gb|EEC67470.1| hypothetical protein OsI_34701 [Oryza sativa Indica Group]
gi|222613297|gb|EEE51429.1| hypothetical protein OsJ_32509 [Oryza sativa Japonica Group]
Length = 541
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/376 (82%), Positives = 338/376 (89%), Gaps = 3/376 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLK 58
ME LVNDRLLQD +S + C S PSTS S +V K PR+SLNVSGPVQPYN LK
Sbjct: 159 METLVNDRLLQDGGSSASTAECTSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLK 217
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGR
Sbjct: 218 NFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGR 277
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
IQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPP
Sbjct: 278 IQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPP 337
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 238
SGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGY
Sbjct: 338 SGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGY 397
Query: 239 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
WDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRM
Sbjct: 398 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRM 457
Query: 299 SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
SLDFA +KHVPFM LW HFAE+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RY
Sbjct: 458 SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRY 517
Query: 359 RLWRDALEKGAKQLPF 374
RLWRDA+E+G +LPF
Sbjct: 518 RLWRDAIERGVDRLPF 533
>gi|242059995|ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
gi|241931118|gb|EES04263.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
Length = 542
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/377 (82%), Positives = 336/377 (89%), Gaps = 4/377 (1%)
Query: 1 MEALVNDRLLQDRHTSGT---DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRL 57
ME LVNDRLL SGT + T PSTS + + K PR+SLNVSGPV+PYN L
Sbjct: 159 METLVNDRLLPPDGASGTSTAESTSLVPSTSSTA-HVRAKKQPRRSLNVSGPVKPYNPSL 217
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEG
Sbjct: 218 KNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEG 277
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 177
RIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLP
Sbjct: 278 RIQCPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLP 337
Query: 178 PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 237
PSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG
Sbjct: 338 PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 397
Query: 238 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 297
YWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYR
Sbjct: 398 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYR 457
Query: 298 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 357
MSLDFA LKHVP M LW HFAE+VLNEDLRLVLGQQERM NGAN+WN PV YDKLG+R
Sbjct: 458 MSLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQERMINGANIWNWPVSYDKLGIR 517
Query: 358 YRLWRDALEKGAKQLPF 374
YRLWRDA+E+G+ +LPF
Sbjct: 518 YRLWRDAVERGSDRLPF 534
>gi|18854993|gb|AAL79685.1|AC087599_4 putative chlorophyll synthase [Oryza sativa Japonica Group]
Length = 519
Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust.
Identities = 292/374 (78%), Positives = 325/374 (86%), Gaps = 1/374 (0%)
Query: 2 EALVNDRLLQDRHTSGT-DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
+ LVNDRLLQD +S + D + S + + V K R SL+VSGPVQPYN LKNF
Sbjct: 138 DNLVNDRLLQDGGSSASIDNYVSLASRTSSASRFVNKKTLRPSLDVSGPVQPYNPNLKNF 197
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PV FS DLKDDTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSV+EGRIQ
Sbjct: 198 WYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQ 257
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CP+HGWEYSTDGKCEKMP+T+L NV+I+SLPCFEQEGM+WIWPGD P +TIP L PPSG
Sbjct: 258 CPFHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPGDGTPESTIPSLQPPSG 317
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VMELP+EHGLLLDNLLD+AHAPF HTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 318 FTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTSTFAKGWSVPSLVKFLTPASGLQGYWD 377
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLST GISKPGKLEG++ +QC+THLHQLH+CLPSSR KTR+LY+MSL
Sbjct: 378 PYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQLHICLPSSRNKTRMLYQMSL 437
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
+FA LKH+PFM LW HF E+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYRL
Sbjct: 438 NFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRL 497
Query: 361 WRDALEKGAKQLPF 374
WRDA+E+GA +LPF
Sbjct: 498 WRDAIERGANRLPF 511
>gi|115483520|ref|NP_001065430.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|78709025|gb|ABB48000.1| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639962|dbj|BAF27267.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|215693283|dbj|BAG88665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185041|gb|EEC67468.1| hypothetical protein OsI_34699 [Oryza sativa Indica Group]
gi|222613295|gb|EEE51427.1| hypothetical protein OsJ_32507 [Oryza sativa Japonica Group]
Length = 542
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/374 (78%), Positives = 325/374 (86%), Gaps = 1/374 (0%)
Query: 2 EALVNDRLLQDRHTSGT-DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
+ LVNDRLLQD +S + D + S + + V K R SL+VSGPVQPYN LKNF
Sbjct: 161 DNLVNDRLLQDGGSSASIDNYVSLASRTSSASRFVNKKTLRPSLDVSGPVQPYNPNLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PV FS DLKDDTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSV+EGRIQ
Sbjct: 221 WYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CP+HGWEYSTDGKCEKMP+T+L NV+I+SLPCFEQEGM+WIWPGD P +TIP L PPSG
Sbjct: 281 CPFHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPGDGTPESTIPSLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VMELP+EHGLLLDNLLD+AHAPF HTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 341 FTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTSTFAKGWSVPSLVKFLTPASGLQGYWD 400
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMVLST GISKPGKLEG++ +QC+THLHQLH+CLPSSR KTR+LY+MSL
Sbjct: 401 PYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQLHICLPSSRNKTRMLYQMSL 460
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
+FA LKH+PFM LW HF E+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYRL
Sbjct: 461 NFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRL 520
Query: 361 WRDALEKGAKQLPF 374
WRDA+E+GA +LPF
Sbjct: 521 WRDAIERGANRLPF 534
>gi|226490898|ref|NP_001151343.1| LOC100284976 [Zea mays]
gi|195645962|gb|ACG42449.1| chlorophyllide a oxygenase [Zea mays]
gi|223948119|gb|ACN28143.1| unknown [Zea mays]
gi|413951238|gb|AFW83887.1| chlorophyllide a oxygenase [Zea mays]
Length = 542
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 308/377 (81%), Positives = 332/377 (88%), Gaps = 4/377 (1%)
Query: 1 MEALVNDRLLQDRHTSGTDQ---TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRL 57
ME LVNDRLL S T T PSTS + + K PR+ LNVSGPV+PYN L
Sbjct: 159 METLVNDRLLPPDGASSTSTAQPTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSL 217
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+PVAFS+DLKDDTMVP CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEG
Sbjct: 218 KNFWYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEG 277
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 177
RIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLP
Sbjct: 278 RIQCPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLP 337
Query: 178 PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 237
PSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG
Sbjct: 338 PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 397
Query: 238 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 297
YWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYR
Sbjct: 398 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYR 457
Query: 298 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 357
MSLDFA LKHVP M LW HFAE+VLNEDLRLVLGQQERM NGANVWN PV YDKLGVR
Sbjct: 458 MSLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGVR 517
Query: 358 YRLWRDALEKGAKQLPF 374
YRLWRD +E+G+++LPF
Sbjct: 518 YRLWRDTVERGSERLPF 534
>gi|312282087|dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]
Length = 534
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/374 (79%), Positives = 336/374 (89%), Gaps = 2/374 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + TD+ S STS Q LD K + K+LNVSGPVQPY+ +LKNF
Sbjct: 161 MEKLVNDRLLPVRVATETDK--PSTSTSVQDLDKEKTNVGAKTLNVSGPVQPYSQQLKNF 218
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP DCFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+V EGRIQ
Sbjct: 219 WYPVAFTADLKHDTMVPIDCFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVKEGRIQ 278
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDGKC KMPST+L NVKIKS+PC EQ+GMIW+WPGD+PP+ T+P L PPSG
Sbjct: 279 CPYHGWEYSTDGKCTKMPSTKLLNVKIKSIPCLEQDGMIWVWPGDDPPSPTLPSLQPPSG 338
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWD
Sbjct: 339 FVIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWD 398
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSSR KTRLLYRMSL
Sbjct: 399 PYPIDMEFKPPCIVLSTIGISKPGKLEGKSTKQCATHLHQLHVCLPSSRNKTRLLYRMSL 458
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LK+VPFM++LWRHFAEQVLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRL
Sbjct: 459 DFAPILKNVPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRL 518
Query: 361 WRDALEKGAKQLPF 374
WR+A+++G +LPF
Sbjct: 519 WRNAVDRGDDKLPF 532
>gi|357126896|ref|XP_003565123.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 550
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/383 (77%), Positives = 330/383 (86%), Gaps = 9/383 (2%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS--PSTS-------KQSLDIVKGKLPRKSLNVSGPVQ 51
ME +VN+RLL D + CA+ PSTS + + K R+SLN+SGPV+
Sbjct: 160 METVVNERLLSDGSAFASTADCATLDPSTSLDLDPSTSSTTHVGAKKAKRRSLNISGPVK 219
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
PYN LKNFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKD PGCVQNTCAHRACPL L
Sbjct: 220 PYNPNLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDRRPGCVQNTCAHRACPLDL 279
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
GSVNEGRI CPYHGWEYSTDGKCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT T
Sbjct: 280 GSVNEGRITCPYHGWEYSTDGKCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPT 339
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
IP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP
Sbjct: 340 IPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTP 399
Query: 232 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 291
SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR K
Sbjct: 400 TSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQLHICLPSSRNK 459
Query: 292 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 351
TRLLYRMSLDFA +KH+PFM LW HFAE+VLNEDLRLVLGQQERMN+GANVWN PV Y
Sbjct: 460 TRLLYRMSLDFAPWIKHIPFMHLLWSHFAEKVLNEDLRLVLGQQERMNSGANVWNWPVSY 519
Query: 352 DKLGVRYRLWRDALEKGAKQLPF 374
DKLG+RYRLWRDA+E+G +LPF
Sbjct: 520 DKLGIRYRLWRDAVERGVDRLPF 542
>gi|297852214|ref|XP_002893988.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
gi|297339830|gb|EFH70247.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/374 (78%), Positives = 331/374 (88%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + D+ S + S LD K KSLNVSGPV PY+ LKNF
Sbjct: 161 MEELVNDRLLPGRVVAELDKPSTSATASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP +CFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQ
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDG+C+KMPST+L VKIKSLPC EQEGMIWIWPGDEPP T+PCL PPSG
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPTLPCLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWD
Sbjct: 341 FLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWD 400
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSL
Sbjct: 401 PYPIDMEFKPPCIVLSTIGISKPGKLEGKSTKQCATHLHQLHVCLPSSKNKTRLLYRMSL 460
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LK++PFM++LWRHFAEQVLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRL
Sbjct: 461 DFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRL 520
Query: 361 WRDALEKGAKQLPF 374
WR+A+++G +LPF
Sbjct: 521 WRNAVDRGDDKLPF 534
>gi|5853117|gb|AAD54323.1| chlorophyll a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 293/374 (78%), Positives = 329/374 (87%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + D+ +S + S LD K KSLNVSGPV PY+ LKNF
Sbjct: 161 MEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP +CFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQ
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDG+C+KMPST+L VKIKSLPC EQEGMIWIWPGDEPP +P L PPSG
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWD
Sbjct: 341 FLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWD 400
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSL
Sbjct: 401 PYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSL 460
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LK++PFM++LWRHFAEQVLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRL
Sbjct: 461 DFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRL 520
Query: 361 WRDALEKGAKQLPF 374
WR+A+++G +LPF
Sbjct: 521 WRNAVDRGDDKLPF 534
>gi|15219408|ref|NP_175088.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|75264959|sp|Q9MBA1.1|CAO_ARATH RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Short=AtCAO; Flags: Precursor
gi|13876511|gb|AAK43487.1|AC084807_12 chlorophyll a oxygenase [Arabidopsis thaliana]
gi|6855279|dbj|BAA90462.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|22135956|gb|AAM91560.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|25083487|gb|AAN72086.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|110737210|dbj|BAF00553.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|332193913|gb|AEE32034.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 293/374 (78%), Positives = 329/374 (87%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + D+ +S + S LD K KSLNVSGPV PY+ LKNF
Sbjct: 161 MEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP +CFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQ
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDG+C+KMPST+L VKIKSLPC EQEGMIWIWPGDEPP +P L PPSG
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWD
Sbjct: 341 FLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWD 400
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSL
Sbjct: 401 PYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSL 460
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LK++PFM++LWRHFAEQVLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRL
Sbjct: 461 DFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRL 520
Query: 361 WRDALEKGAKQLPF 374
WR+A+++G +LPF
Sbjct: 521 WRNAVDRGDDKLPF 534
>gi|5478797|dbj|BAA82479.1| chlorophyll b synthase [Oryza sativa]
Length = 356
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 292/341 (85%), Positives = 317/341 (92%)
Query: 34 IVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG 93
+V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG
Sbjct: 8 VVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDG 67
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF 153
PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCF
Sbjct: 68 RPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCF 127
Query: 154 EQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
EQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHT
Sbjct: 128 EQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHT 187
Query: 214 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
STFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+Q
Sbjct: 188 STFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQ 247
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
C+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFAE+VLNEDLRLVLG
Sbjct: 248 CSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLG 307
Query: 334 QQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
QQERM NGANVWN PV YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 308 QQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 348
>gi|385722324|gb|AFI73228.1| chlorophyllide a oxygenase [Hordeum vulgare]
gi|385722326|gb|AFI73229.1| chlorophyllide a oxygenase [Hordeum vulgare subsp. vulgare]
gi|385722328|gb|AFI73230.1| chlorophyllide a oxygenase [Hordeum vulgare]
Length = 550
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/383 (77%), Positives = 327/383 (85%), Gaps = 9/383 (2%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS---------PSTSKQSLDIVKGKLPRKSLNVSGPVQ 51
ME +VN+RLL D CAS +++ ++ + K R+SLN+SGPV+
Sbjct: 160 METVVNERLLSDGSAFANTADCASLDPSTSLDTTTSTSSTVRVGAKKPKRRSLNISGPVK 219
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
PY+ LKNFW+PVAFS DLKDDTMVP DCFEE WVIFRGKD PGCVQNTCAHRACPL L
Sbjct: 220 PYSANLKNFWYPVAFSGDLKDDTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDL 279
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
GSVNEGRI CPYHGWEYSTDGKCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT T
Sbjct: 280 GSVNEGRITCPYHGWEYSTDGKCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPT 339
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
IP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP
Sbjct: 340 IPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTP 399
Query: 232 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 291
SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS K
Sbjct: 400 TSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSTNK 459
Query: 292 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 351
TRLLYRMSLDFA +KH+PFM LW HFAE+VLNEDLRLVLGQQ+RMNNGANVWN PV Y
Sbjct: 460 TRLLYRMSLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDRMNNGANVWNWPVSY 519
Query: 352 DKLGVRYRLWRDALEKGAKQLPF 374
DKLG+RYRLWRDA+E+G +LPF
Sbjct: 520 DKLGIRYRLWRDAVERGVDRLPF 542
>gi|83317156|gb|ABC02752.1| chlorophyll synthase [Phyllostachys edulis]
Length = 541
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/375 (76%), Positives = 322/375 (85%), Gaps = 1/375 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGK-LPRKSLNVSGPVQPYNTRLKN 59
ME LVNDRLLQD +S + C S + S S K PR+++NVSGPV+PYN +L+N
Sbjct: 159 METLVNDRLLQDGSSSASTAECTSLTPSTSSTTHAGAKKQPRRNINVSGPVKPYNPKLQN 218
Query: 60 FWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 119
FW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVN GRI
Sbjct: 219 FWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNGGRI 278
Query: 120 QCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS 179
QCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPGD+PP +TIP LLP S
Sbjct: 279 QCPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCFEQEGMVWIWPGDDPPKSTIPSLLPRS 338
Query: 180 GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYW 239
GF IHAEIVMELP+ HGLLLDNLLD AHAPFT T TFAKGWSVPSLV+FL P+ L GYW
Sbjct: 339 GFTIHAEIVMELPVRHGLLLDNLLDTAHAPFTLTFTFAKGWSVPSLVEFLAPSPLLPGYW 398
Query: 240 DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS 299
D + +EFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMS
Sbjct: 399 DLSQMIVEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMS 458
Query: 300 LDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
LDFA LKH+PFM LW +FAE+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYR
Sbjct: 459 LDFAPWLKHIPFMHLLWSYFAEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYR 518
Query: 360 LWRDALEKGAKQLPF 374
WRDA+E+GA +LPF
Sbjct: 519 QWRDAVERGADRLPF 533
>gi|5478807|dbj|BAA82484.1| chlorophyll b synthase [Arabidopsis thaliana]
Length = 536
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/374 (77%), Positives = 327/374 (87%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + D+ +S + S LD K KSLNVSGPV PY+ LKNF
Sbjct: 161 MEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP +CFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQ
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDG+C+KMPST+L VKIKSLPC EQEGMIWIWPGDEPP +P L PPSG
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWD
Sbjct: 341 FLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWD 400
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATH HQLHVCLPSS+ KTRLL RMSL
Sbjct: 401 PYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHFHQLHVCLPSSKNKTRLLCRMSL 460
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA +LK++PFM++LWRHFAEQVLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRL
Sbjct: 461 DFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRL 520
Query: 361 WRDALEKGAKQLPF 374
WR+A+++G +LPF
Sbjct: 521 WRNAVDRGDDKLPF 534
>gi|326500120|dbj|BAJ90895.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 294/383 (76%), Positives = 326/383 (85%), Gaps = 9/383 (2%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS---------PSTSKQSLDIVKGKLPRKSLNVSGPVQ 51
ME +VN+RLL D CAS +++ ++ + K R+SLN+SGPV+
Sbjct: 160 METVVNERLLSDGSAFANTADCASLDPSTSLDTTTSTSSTVRVGAKKPKRRSLNISGPVK 219
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
PY+ LKNFW+PVAFS DLKDDTMVP DCFEE WVIFRGKD PGCVQNTCAHRACPL L
Sbjct: 220 PYSANLKNFWYPVAFSGDLKDDTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDL 279
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
GSVNEGRI CPYHGWEYSTDGKCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT T
Sbjct: 280 GSVNEGRITCPYHGWEYSTDGKCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPT 339
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
IP LLP SGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP
Sbjct: 340 IPSLLPLSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTP 399
Query: 232 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 291
SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS K
Sbjct: 400 TSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSTNK 459
Query: 292 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 351
TRLLYRMSLDFA +KH+PFM LW HFAE+VLNEDLRLVLGQQ+RMNNGANVWN PV Y
Sbjct: 460 TRLLYRMSLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDRMNNGANVWNWPVSY 519
Query: 352 DKLGVRYRLWRDALEKGAKQLPF 374
DKLG+RYRLWRDA+E+G +LPF
Sbjct: 520 DKLGIRYRLWRDAVERGVDRLPF 542
>gi|9944967|gb|AAG03051.1|AF284781_1 LLS1 protein [Oryza sativa Japonica Group]
Length = 540
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/376 (78%), Positives = 326/376 (86%), Gaps = 4/376 (1%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLK 58
ME LVNDRLLQD +S + C S PSTS S +V K PR+SLNVSGPVQPYN LK
Sbjct: 159 METLVNDRLLQDGGSSASTAECTSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLK 217
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGR
Sbjct: 218 NFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGR 277
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
IQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPP
Sbjct: 278 IQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPP 337
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 238
SGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGY
Sbjct: 338 SGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGY 397
Query: 239 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
WDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRM
Sbjct: 398 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRM 457
Query: 299 SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
SLDFA +KHVPFM LW HFAE+VLNEDLR+VLGQQ+ L KLG+RY
Sbjct: 458 SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRVVLGQQDGC-QWRKCLELASIICKLGIRY 516
Query: 359 RLWRDALEKGAKQLPF 374
RLWRDA+E+G +LPF
Sbjct: 517 RLWRDAIERGVDRLPF 532
>gi|414878608|tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 538
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 290/342 (84%), Positives = 314/342 (91%), Gaps = 2/342 (0%)
Query: 35 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDG 93
K K PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DCFEE WVIFRGKDG
Sbjct: 188 AKNKQPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDG 247
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF 153
PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ +V+I+SLPCF
Sbjct: 248 RPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCF 307
Query: 154 EQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
EQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHT
Sbjct: 308 EQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHT 367
Query: 214 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL+G++TRQ
Sbjct: 368 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLQGKSTRQ 427
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
C+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HFAE+VLNEDLRLVLG
Sbjct: 428 CSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLG 487
Query: 334 QQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGA-KQLPF 374
QQE M +GANVWN PV YDKLG+RYRLWRDA+E+GA +LPF
Sbjct: 488 QQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERGADDRLPF 529
>gi|226502977|ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea mays]
gi|194706992|gb|ACF87580.1| unknown [Zea mays]
Length = 440
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/342 (84%), Positives = 314/342 (91%), Gaps = 2/342 (0%)
Query: 35 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDG 93
K K PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DCFEE WVIFRGKDG
Sbjct: 90 AKNKQPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDG 149
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF 153
PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ +V+I+SLPCF
Sbjct: 150 RPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCF 209
Query: 154 EQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
EQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHT
Sbjct: 210 EQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHT 269
Query: 214 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL+G++TRQ
Sbjct: 270 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLQGKSTRQ 329
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
C+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HFAE+VLNEDLRLVLG
Sbjct: 330 CSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLG 389
Query: 334 QQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGA-KQLPF 374
QQE M +GANVWN PV YDKLG+RYRLWRDA+E+GA +LPF
Sbjct: 390 QQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERGADDRLPF 431
>gi|338173749|gb|AEI83421.1| chlorophyllide a oxygenase [Camellia sinensis]
Length = 536
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/378 (74%), Positives = 313/378 (82%), Gaps = 3/378 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTC--ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLK 58
ME LV+DRLLQD+ T+ T+ C S STS +SLD V+ KL RK LNVSGPVQPY+ RLK
Sbjct: 158 MEELVHDRLLQDKPTT-TESECMSPSSSTSTESLDTVRNKLSRKILNVSGPVQPYHPRLK 216
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVAFSTDLKDDTMVP DCFEEPWVIFRGKDG PGCVQNTCAHRACPLHLG +NEGR
Sbjct: 217 NFWYPVAFSTDLKDDTMVPIDCFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGPINEGR 276
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
IQCPYHGWEYSTDGKC+KMPST+L N KIK+LPCFEQEGMIWIWPG++ PTATIP L PP
Sbjct: 277 IQCPYHGWEYSTDGKCKKMPSTRLVNAKIKALPCFEQEGMIWIWPGNDAPTATIPSLQPP 336
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 238
GF+IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL KFLTPASGLQGY
Sbjct: 337 PGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLAKFLTPASGLQGY 396
Query: 239 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
WDPYPIDMEFRPPCMVLSTIGIS PG + + ++
Sbjct: 397 WDPYPIDMEFRPPCMVLSTIGISSPGNWKDRALSSALRIFTNFMYAYHHLDRRQGYCTEC 456
Query: 299 SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
+LKHVPFMQYLW++FAE+VLNEDLR+V+GQQ+RM NGANVWNLPV YDKLGVRY
Sbjct: 457 RWILLPMLKHVPFMQYLWKYFAEKVLNEDLRIVIGQQDRMLNGANVWNLPVSYDKLGVRY 516
Query: 359 RLWRDALEKGAKQLPFMK 376
RLWRDA+++GAKQLPF K
Sbjct: 517 RLWRDAVDQGAKQLPFSK 534
>gi|110289598|gb|AAP55073.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 527
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/325 (82%), Positives = 292/325 (89%), Gaps = 3/325 (0%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCAS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLK 58
ME LVNDRLLQD +S + C S PSTS S +V K PR+SLNVSGPVQPYN LK
Sbjct: 159 METLVNDRLLQDGGSSASTAECTSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLK 217
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGR
Sbjct: 218 NFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGR 277
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
IQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPP
Sbjct: 278 IQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPP 337
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 238
SGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGY
Sbjct: 338 SGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGY 397
Query: 239 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
WDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRM
Sbjct: 398 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRM 457
Query: 299 SLDFASVLKHVPFMQYLWRHFAEQV 323
SLDFA +KHVPFM LW HFAE+V
Sbjct: 458 SLDFAPWIKHVPFMHILWSHFAEKV 482
>gi|168057848|ref|XP_001780924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667637|gb|EDQ54262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/387 (64%), Positives = 300/387 (77%), Gaps = 16/387 (4%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKL-------PR------KSLNVS 47
ME+L N +LLQ++ G ++ P + + G+ PR KSL VS
Sbjct: 121 MESLFNTKLLQNQ---GRERGSTVPKATSALQLALTGEAEADLSARPRTNTSRAKSLEVS 177
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 107
GP+ PY +LKN+W+PVAFS D+ D TMVPF+ FEE WVIFRGKDG PGCV+++CAHRAC
Sbjct: 178 GPIGPYPAQLKNYWYPVAFSADIDDKTMVPFNSFEEAWVIFRGKDGRPGCVRDSCAHRAC 237
Query: 108 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEP 167
PL LG V EGRIQCPYHGWEY+T GKCEKMPST+ N K+ SLPC EQ+GM+WIWPG+E
Sbjct: 238 PLSLGKVEEGRIQCPYHGWEYNTSGKCEKMPSTRFVNAKLDSLPCIEQDGMVWIWPGNET 297
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P+ +PCL PPS + IHA+I MELP+EHGLL++NLLDLAHAPFTHT+TFAKGW VP+ VK
Sbjct: 298 PSTNLPCLNPPSHYTIHAQITMELPVEHGLLVENLLDLAHAPFTHTTTFAKGWDVPNFVK 357
Query: 228 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 287
F TP + LQG WDPYPI MEF+PPCMVLSTIG+ KPGKL G + C THLHQLHVC+PS
Sbjct: 358 FRTPIAALQGTWDPYPIAMEFKPPCMVLSTIGLEKPGKLNGSDVEACPTHLHQLHVCMPS 417
Query: 288 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 347
S+ KTRLLYRM+LDFA LKHVPF++YLW+H A +VL EDLRLV GQQ+RM GANVWN+
Sbjct: 418 SKGKTRLLYRMALDFAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQQDRMERGANVWNV 477
Query: 348 PVGYDKLGVRYRLWRDALEKGAKQLPF 374
PV YDKLGVRYR WR A+E G +++PF
Sbjct: 478 PVAYDKLGVRYRRWRIAIESGDERIPF 504
>gi|168050551|ref|XP_001777722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670942|gb|EDQ57502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 562
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 253/385 (65%), Positives = 298/385 (77%), Gaps = 10/385 (2%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPST------SKQSLDIV---KGKLPR-KSLNVSGPV 50
ME+LVND+LLQ+ + + ST + DI +G R K L+VSGP+
Sbjct: 176 MESLVNDKLLQNINPKRGKTVPKAASTMEPVVMGEAEADISVRSRGSTSRGKPLDVSGPM 235
Query: 51 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 110
PY +LKN W+P AFS D+ D TMVPFD FEE WVIFRGKDG PGCV+++CAHRACPL
Sbjct: 236 GPYPAQLKNHWYPAAFSADIDDKTMVPFDSFEEAWVIFRGKDGRPGCVRDSCAHRACPLS 295
Query: 111 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
LG V +GRIQCPYHGWEY+T GKCEKMPST+L N ++ SLPC EQ+GM+WIWPG+E P+
Sbjct: 296 LGKVEDGRIQCPYHGWEYNTSGKCEKMPSTRLVNAELDSLPCIEQDGMVWIWPGNETPST 355
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
+PCL PPS + IHA+I MELP+EHGLL++NLLDLAHAPFTHT+TFAKGW VPS VKF T
Sbjct: 356 NLPCLNPPSHYTIHAQITMELPVEHGLLVENLLDLAHAPFTHTTTFAKGWEVPSFVKFRT 415
Query: 231 PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRK 290
P + L G WDPYPI MEF+PPCMVLSTIG+ KPGKL G + C THLHQLHVC+PSS+
Sbjct: 416 PIAALSGTWDPYPIAMEFKPPCMVLSTIGLEKPGKLNGTDVDACPTHLHQLHVCMPSSKG 475
Query: 291 KTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 350
KTRLLYRM+LDFA LKHVPF++YLW+H A +VL EDLRLV GQQ+RM GANVWNLPV
Sbjct: 476 KTRLLYRMALDFAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQQDRMERGANVWNLPVA 535
Query: 351 YDKLGVRYRLWRDALEKGAKQLPFM 375
YDKLGVRYR WR LE G ++ PFM
Sbjct: 536 YDKLGVRYRRWRVDLESGDEKTPFM 560
>gi|413951240|gb|AFW83889.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 487
Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/326 (81%), Positives = 284/326 (87%), Gaps = 4/326 (1%)
Query: 1 MEALVNDRLLQDRHTSGTDQ---TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRL 57
ME LVNDRLL S T T PSTS + + K PR+ LNVSGPV+PYN L
Sbjct: 159 METLVNDRLLPPDGASSTSTAQPTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSL 217
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+PVAFS+DLKDDTMVP CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEG
Sbjct: 218 KNFWYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEG 277
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 177
RIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLP
Sbjct: 278 RIQCPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLP 337
Query: 178 PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 237
PSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG
Sbjct: 338 PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 397
Query: 238 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 297
YWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYR
Sbjct: 398 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYR 457
Query: 298 MSLDFASVLKHVPFMQYLWRHFAEQV 323
MSLDFA LKHVP M LW HFAE+
Sbjct: 458 MSLDFAPWLKHVPLMHLLWSHFAEKA 483
>gi|413951239|gb|AFW83888.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 512
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/329 (80%), Positives = 285/329 (86%), Gaps = 4/329 (1%)
Query: 1 MEALVNDRLLQDRHTSGTDQ---TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRL 57
ME LVNDRLL S T T PSTS + + K PR+ LNVSGPV+PYN L
Sbjct: 159 METLVNDRLLPPDGASSTSTAQPTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSL 217
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+PVAFS+DLKDDTMVP CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEG
Sbjct: 218 KNFWYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEG 277
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 177
RIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLP
Sbjct: 278 RIQCPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLP 337
Query: 178 PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 237
PSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG
Sbjct: 338 PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG 397
Query: 238 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 297
YWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYR
Sbjct: 398 YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYR 457
Query: 298 MSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
MSLDFA LKHVP M LW HFAE+ E
Sbjct: 458 MSLDFAPWLKHVPLMHLLWSHFAEKACLE 486
>gi|42571757|ref|NP_973969.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193914|gb|AEE32035.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 511
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/323 (78%), Positives = 282/323 (87%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + D+ +S + S LD K KSLNVSGPV PY+ LKNF
Sbjct: 161 MEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP +CFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQ
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDG+C+KMPST+L VKIKSLPC EQEGMIWIWPGDEPP +P L PPSG
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWD
Sbjct: 341 FLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWD 400
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSL
Sbjct: 401 PYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSL 460
Query: 301 DFASVLKHVPFMQYLWRHFAEQV 323
DFA +LK++PFM++LWRHFAEQV
Sbjct: 461 DFAPILKNLPFMEHLWRHFAEQV 483
>gi|148906570|gb|ABR16437.1| unknown [Picea sitchensis]
Length = 303
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/300 (81%), Positives = 273/300 (91%)
Query: 75 MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC 134
MVPFDCFEEPWVIFRGKD GCVQNTCAHRACPLHLGSV +GRIQCPYHGWEY+TDG C
Sbjct: 1 MVPFDCFEEPWVIFRGKDSRAGCVQNTCAHRACPLHLGSVTDGRIQCPYHGWEYATDGVC 60
Query: 135 EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE 194
EKMPST L NV IK+LPC EQ+G+IW+WPG+E P A +P L PPSGF IHA+IVMELP+E
Sbjct: 61 EKMPSTHLLNVHIKALPCVEQDGLIWVWPGNEIPDAPLPSLAPPSGFNIHAQIVMELPVE 120
Query: 195 HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMV 254
HGLLLDNLLDLAHAPFTHTSTFAKGW +PS VKF+TPA+GLQGYWDPYPIDMEF PPCMV
Sbjct: 121 HGLLLDNLLDLAHAPFTHTSTFAKGWEIPSFVKFMTPAAGLQGYWDPYPIDMEFCPPCMV 180
Query: 255 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 314
LSTIGISKPGK+EG++T+ C+THLHQLHVC+PSSR+KTRLLYRMSLDFA +LKH+PFM
Sbjct: 181 LSTIGISKPGKIEGRSTQNCSTHLHQLHVCIPSSRQKTRLLYRMSLDFAPLLKHIPFMHI 240
Query: 315 LWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
LWRHFA++VLNEDLRLV+GQQ+RM GANVWNLPV YDKLG+RYR+WR+A+E G KQLPF
Sbjct: 241 LWRHFADKVLNEDLRLVIGQQDRMVRGANVWNLPVSYDKLGIRYRIWRNAVEDGQKQLPF 300
>gi|357438661|ref|XP_003589607.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
gi|355478655|gb|AES59858.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
Length = 575
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/305 (80%), Positives = 269/305 (88%), Gaps = 11/305 (3%)
Query: 73 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG--------RIQCP-- 122
D VP +CFEEPWVIFRGKDG PGCVQNTCAHRACPL G +++ P
Sbjct: 271 DVGVPMECFEEPWVIFRGKDGKPGCVQNTCAHRACPLPPWFCKRGSYRIAPTTKLKLPNG 330
Query: 123 -YHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF 181
GWEY+TDGKCEKMPST++ NVKIKS+PCFE+EGMIWIWPG +PP AT+P LLPPSGF
Sbjct: 331 WISGWEYTTDGKCEKMPSTRMLNVKIKSIPCFEKEGMIWIWPGSDPPAATLPSLLPPSGF 390
Query: 182 EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDP 241
+HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS V FLTPASGLQGYWDP
Sbjct: 391 IVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVNFLTPASGLQGYWDP 450
Query: 242 YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLD 301
YPIDMEFRPPCMVLSTIGISKPGKLEGQ+T++C+THLHQLHVCLPSS+ KTRLLYRMSLD
Sbjct: 451 YPIDMEFRPPCMVLSTIGISKPGKLEGQSTKECSTHLHQLHVCLPSSKDKTRLLYRMSLD 510
Query: 302 FASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLW 361
FA +LKH+PFM++LWRHFAEQVLNEDLRLV+GQQERMN GANVWN+PV YDKLGVRYRLW
Sbjct: 511 FAPLLKHMPFMEHLWRHFAEQVLNEDLRLVVGQQERMNKGANVWNVPVTYDKLGVRYRLW 570
Query: 362 RDALE 366
RDALE
Sbjct: 571 RDALE 575
>gi|302817640|ref|XP_002990495.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
gi|300141663|gb|EFJ08372.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
Length = 491
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 278/366 (75%), Gaps = 13/366 (3%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME +VND LLQ + T + A+ S SK LN++GPV+ Y +KN+
Sbjct: 106 METMVNDELLQKDEAAVTVRKNATSSKSK-------------GLNIAGPVKRYPAEMKNY 152
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFS L + + + FE+ WV+FRGKDG GC+ + CAHRACPL LG VN+G +Q
Sbjct: 153 WYPVAFSACLDSEKPLAIEIFEKNWVLFRGKDGRAGCIHDACAHRACPLSLGKVNDGCLQ 212
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+T G CEKMPST+ K+KS+PC E++G++WIWPG P + IP LLPP
Sbjct: 213 CPYHGWEYATSGSCEKMPSTRFVPTKVKSMPCIEKDGLVWIWPGSATPESDIPSLLPPEN 272
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F +HAEI+++L +EHGLL++NLLDLAHAPFTHT+TFAKGWSVPS VKF TP L+GYWD
Sbjct: 273 FTLHAEIILDLEVEHGLLMENLLDLAHAPFTHTTTFAKGWSVPSSVKFKTPVETLRGYWD 332
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFR PCMVLSTIG++KPGKLEG +T+ C HLHQLHVC+PS+R KTRLLYRMSL
Sbjct: 333 PYPIDMEFRRPCMVLSTIGLAKPGKLEGSDTQSCKNHLHQLHVCIPSTRGKTRLLYRMSL 392
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA LK+VPF+Q LW H A +VL+EDLRLV GQQERM GANVWNLPV YDKLGVRYR
Sbjct: 393 DFAPWLKYVPFIQTLWVHLARKVLDEDLRLVEGQQERMVRGANVWNLPVPYDKLGVRYRK 452
Query: 361 WRDALE 366
WR + E
Sbjct: 453 WRVSCE 458
>gi|302804017|ref|XP_002983761.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
gi|300148598|gb|EFJ15257.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
Length = 481
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 278/366 (75%), Gaps = 13/366 (3%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME +VND LLQ + T + A+ S SK LN++GPV+ Y +KN+
Sbjct: 106 METMVNDELLQKDEEAVTVRKNATSSKSK-------------GLNIAGPVKRYPAEMKNY 152
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAFS L + + + FE+ WV+FRGKDG GC+ + CAHRACPL LG VN+G +Q
Sbjct: 153 WYPVAFSACLDSEKPLAIEIFEKNWVLFRGKDGRAGCIHDACAHRACPLSLGKVNDGCLQ 212
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEY+T G CEKMPST+ K+KS+PC E++G++WIWPG P + IP LLPP
Sbjct: 213 CPYHGWEYATSGSCEKMPSTRFVPTKVKSMPCIEKDGLVWIWPGSATPESDIPSLLPPDN 272
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F +HAEI+++L +EHGLL++NLLDLAHAPFTHT+TFAKGWSVPS VKF TP L+GYWD
Sbjct: 273 FTLHAEIILDLEVEHGLLMENLLDLAHAPFTHTTTFAKGWSVPSSVKFQTPVETLRGYWD 332
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFR PCMVLSTIG++KPGKLEG +T+ C HLHQLHVC+PS+R KTRLLYRMSL
Sbjct: 333 PYPIDMEFRRPCMVLSTIGLAKPGKLEGSDTQSCKNHLHQLHVCIPSTRGKTRLLYRMSL 392
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA LK+VPF+Q LW H A +VL+EDLRLV GQQERM GANVWNLPV YDKLGVRYR
Sbjct: 393 DFAPWLKYVPFIQTLWVHLARKVLDEDLRLVEGQQERMVRGANVWNLPVPYDKLGVRYRK 452
Query: 361 WRDALE 366
WR + E
Sbjct: 453 WRVSCE 458
>gi|238767622|dbj|BAH66650.1| chlorophyllide a oxygenase [Klebsormidium flaccidum]
Length = 322
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/311 (65%), Positives = 245/311 (78%), Gaps = 1/311 (0%)
Query: 62 FPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 121
+PVAFS ++ TMVP DCF EPWVIFR +DG GC+++ CAHRACPL LG++ +G++QC
Sbjct: 1 YPVAFSENVDSKTMVPIDCFNEPWVIFRDQDGKAGCIRDECAHRACPLSLGALVDGKVQC 60
Query: 122 PYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF 181
PYHGWEY+T G+C MPST +++LPC EQ+GMIWIWPGD+ P AT+P L PPSG+
Sbjct: 61 PYHGWEYTTSGECTHMPSTVQAPTSVRALPCVEQDGMIWIWPGDKVPEATLPDLSPPSGY 120
Query: 182 EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWD 240
IHA+I +E+P+EHGLL++NLLDLAHAPFTHT+TFAKGW VP+ VKF T A+ L G+WD
Sbjct: 121 TIHAQITLEVPVEHGLLVENLLDLAHAPFTHTTTFAKGWPVPNSVKFKTAAAAALSGFWD 180
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
PYPIDMEFRPPCMV STIG+S+PGKL G NT+ C HLHQLHVC+PS TRLLYRMSL
Sbjct: 181 PYPIDMEFRPPCMVFSTIGLSQPGKLSGTNTKDCPNHLHQLHVCVPSKTGTTRLLYRMSL 240
Query: 301 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 360
DFA K+VPF+ LW + A QVL+EDLRLV GQQ+RM GANVWN PV YDKLGVRYR
Sbjct: 241 DFAWWAKYVPFIHKLWEYMANQVLSEDLRLVEGQQDRMIRGANVWNHPVAYDKLGVRYRR 300
Query: 361 WRDALEKGAKQ 371
WR E +
Sbjct: 301 WRQQQEDSTSR 311
>gi|253787589|dbj|BAH84854.1| putative chlorophyllide a oxygenase, partial [Cucumis sativus]
Length = 235
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/235 (87%), Positives = 225/235 (95%)
Query: 102 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 161
CAHRACPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPST+L NVKIKSLPCFE+EGMIW+
Sbjct: 1 CAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWV 60
Query: 162 WPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
WPG++PP A +P L PP GF+IHAE+V+E+P+EHGLLLDNLLDLAHAPFTHTSTFAKGWS
Sbjct: 61 WPGNDPPAANLPSLKPPPGFQIHAELVIEIPVEHGLLLDNLLDLAHAPFTHTSTFAKGWS 120
Query: 222 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+C+THLHQL
Sbjct: 121 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQL 180
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
HVCLPS+R+KTRLLYRMSLDFA VLK +PFM YLWRHFAEQVLNEDLR VLGQQE
Sbjct: 181 HVCLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRFVLGQQE 235
>gi|5478799|dbj|BAA82480.1| chlorophyll b synthase [Marchantia polymorpha]
Length = 282
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/280 (67%), Positives = 226/280 (80%), Gaps = 1/280 (0%)
Query: 71 KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYST 130
+ D M+P + FEEPWV+FRGKDG GCV++ CAHRACPL LG+V +GRIQCPYHGWEY+T
Sbjct: 4 ESDIMIPIESFEEPWVLFRGKDGRAGCVRDECAHRACPLSLGTVVDGRIQCPYHGWEYNT 63
Query: 131 DGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVME 190
GKCEKMPST+ I++LPC EQ+GM+WIWPGDE P AT+P LLPP + IHAEIV+E
Sbjct: 64 GGKCEKMPSTRPLKTGIRALPCIEQDGMVWIWPGDETPAATLPSLLPPENYTIHAEIVLE 123
Query: 191 LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRP 250
LP+EHGLL++NLLDLAHAPFTHTSTFAKGWSVP++VKF TP L G WDPYPIDM F+P
Sbjct: 124 LPVEHGLLMENLLDLAHAPFTHTSTFAKGWSVPNMVKFKTPMQALSGNWDPYPIDMAFQP 183
Query: 251 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP 310
PCMVLSTIG+ KPGKL+G +T C+ HLHQLHVC+PSSR KTRL+YR + + +P
Sbjct: 184 PCMVLSTIGLVKPGKLDGSSTASCSKHLHQLHVCMPSSRGKTRLMYRWLWTLPNG-RSMP 242
Query: 311 FMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 350
++ +W H A QVLNEDLRLV GQQ+RM GANVW PVG
Sbjct: 243 YIDRVWTHLANQVLNEDLRLVEGQQDRMKRGANVWQTPVG 282
>gi|302844701|ref|XP_002953890.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
gi|300260702|gb|EFJ44919.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
Length = 657
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/353 (54%), Positives = 250/353 (70%), Gaps = 11/353 (3%)
Query: 16 SGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM 75
S + +P + + I +G+ SL+ + L+NFW+P FS L DT+
Sbjct: 277 SSDGTSVVAPPGRRSKVAIRRGRGLESSLD-------FEPGLRNFWYPAEFSAKLGQDTL 329
Query: 76 VPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCE 135
VPF+ F EPWV+FR + G P C+++ CAHRACPL LG V EG++ C YHGWE++ DG C
Sbjct: 330 VPFELFGEPWVLFRDEKGQPACIKDECAHRACPLSLGKVVEGQVVCAYHGWEFNGDGHCT 389
Query: 136 KMPST-QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PPSGFEIHAEIVMELPI 193
KMPST RNV + +LPC E++G IW+WPGD P T+P PP GF++HAEI++++P+
Sbjct: 390 KMPSTPHCRNVGVSALPCAEKDGFIWVWPGDGLPAQTLPDFARPPEGFQVHAEIMVDVPV 449
Query: 194 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCM 253
EHGLL++NLLDLAHAPFTHT+TFA+GW VP VKF T L GYWDPYPIDM F+PPCM
Sbjct: 450 EHGLLMENLLDLAHAPFTHTTTFARGWPVPDFVKFHT-NKLLSGYWDPYPIDMAFQPPCM 508
Query: 254 VLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 312
VLSTIG+++PGK + G QC HLHQLHVC+PS + TRLLYRMSLDF +++VPF+
Sbjct: 509 VLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYRMSLDFLPWMRYVPFI 568
Query: 313 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
+W++ A QVL EDL LVLGQQ+R+ G N W+ P YDKL VRYR WR+++
Sbjct: 569 DKVWKNVAGQVLGEDLVLVLGQQDRLLRGGNTWSNPAPYDKLAVRYRRWRNSV 621
>gi|159463890|ref|XP_001690175.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
gi|115311321|sp|Q9ZWM5.2|CAO_CHLRE RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|61742126|gb|AAX54904.1| chloroplast chlorophyllide a oxygenase precursor [Chlamydomonas
reinhardtii]
gi|158284163|gb|EDP09913.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 645
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/312 (59%), Positives = 231/312 (74%), Gaps = 4/312 (1%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+NFW+P FS L DT+VPF+ F EPWV+FR + G P C+++ CAHR CPL LG V E
Sbjct: 301 LRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVE 360
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G++ CPYHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T+P
Sbjct: 361 GQVMCPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDF 420
Query: 176 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 234
PP GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF
Sbjct: 421 AQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKA 479
Query: 235 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTR 293
L G+WDPYPIDM F+PPCM LSTIG+++PGK + G QC HLHQLHVC+PS + TR
Sbjct: 480 LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTR 539
Query: 294 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 353
LLYRMSLDF ++HVPF+ +W+ A QVL EDL LVLGQQ+RM G + W+ P YDK
Sbjct: 540 LLYRMSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDK 599
Query: 354 LGVRYRLWRDAL 365
L VRYR WR+ +
Sbjct: 600 LAVRYRRWRNGV 611
>gi|3786324|dbj|BAA33964.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 463
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/312 (59%), Positives = 230/312 (73%), Gaps = 4/312 (1%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+NFW+P FS L DT+VPF+ F EPWV+FR + G P +++ CAHR CPL LG V E
Sbjct: 119 LRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSYIRDECAHRGCPLSLGKVVE 178
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G++ CPYHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T+P
Sbjct: 179 GQVMCPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDF 238
Query: 176 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 234
PP GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF
Sbjct: 239 AQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKA 297
Query: 235 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTR 293
L G+WDPYPIDM F+PPCM LSTIG+++PGK + G QC HLHQLHVC+PS + TR
Sbjct: 298 LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTR 357
Query: 294 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 353
LLYRMSLDF ++HVPF+ +W+ A QVL EDL LVLGQQ+RM G + W+ P YDK
Sbjct: 358 LLYRMSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDK 417
Query: 354 LGVRYRLWRDAL 365
L VRYR WR+ +
Sbjct: 418 LAVRYRRWRNGV 429
>gi|384246692|gb|EIE20181.1| PaO-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/319 (58%), Positives = 232/319 (72%), Gaps = 5/319 (1%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+L++FW+PVAFS+ LKD MV + F +PWV+FR G+P CV++ CAHRACPL LGSV
Sbjct: 14 QLQDFWYPVAFSSQLKDGAMVTMELFGKPWVLFRDAQGLPSCVKDACAHRACPLSLGSVV 73
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP- 173
+G IQCPYHGW+Y G C KMPST + + + +LP E EG +W+WPG P +P
Sbjct: 74 DGCIQCPYHGWQYDGSGNCTKMPSTAFCKGITVSTLPVSESEGFVWVWPGRSVPEHNVPQ 133
Query: 174 -CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 232
PP GF +HAE+++E+P+EHGLLL+NLLDLAHAPFTHTSTFAKGW VP +VKF A
Sbjct: 134 HVTRPPDGFTVHAELILEVPVEHGLLLENLLDLAHAPFTHTSTFAKGWPVPDVVKF-NAA 192
Query: 233 SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKK 291
L G W+PYPIDM F PPCMVLSTIG+++PGK+E G C HLHQLHVCLP+ +
Sbjct: 193 RMLGGNWEPYPIDMAFEPPCMVLSTIGLAQPGKIERGARAASCKNHLHQLHVCLPAGPGR 252
Query: 292 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 351
TRLLYRMS+DF K VP +Q W H A+QV+ EDL LV GQQ+RM GA+VW PV Y
Sbjct: 253 TRLLYRMSMDFLQWTKAVPGIQAFWAHIAKQVMGEDLVLVAGQQDRMLRGADVWANPVAY 312
Query: 352 DKLGVRYRLWRDALEKGAK 370
DKLGVRYR WR+++ G+
Sbjct: 313 DKLGVRYRRWRNSVAAGSS 331
>gi|307103693|gb|EFN51951.1| hypothetical protein CHLNCDRAFT_54799 [Chlorella variabilis]
Length = 683
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/320 (55%), Positives = 222/320 (69%), Gaps = 4/320 (1%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN WF VAF + L + VPF+ F + WV+FR +G P CV + CAHR CPL LG V +
Sbjct: 327 LKNHWFAVAFVSKLGPEDKVPFELFGQAWVLFRDSEGRPACVLDECAHRGCPLSLGQVVD 386
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + CPYHGW ++ G+C KMPST L R V + +LPC EQ+G +W+WPG E PT +P +
Sbjct: 387 GNLVCPYHGWRFNGKGECTKMPSTNLCRGVAVSALPCAEQDGFVWVWPGWEEPTLPLPAV 446
Query: 176 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 234
PP+G+ IHAEI +E+P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF +
Sbjct: 447 TRPPAGYRIHAEIEVEVPVEHGLLVENLLDLAHAPFTHTSTFARGWPVPDAVKFHA-SRL 505
Query: 235 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTR 293
L G WDPYPI+M F PPCM LS +G+++PGK G + C HLHQLHVCLPS TR
Sbjct: 506 LGGNWDPYPIEMSFNPPCMTLSHVGLARPGKAGVGATPQDCQNHLHQLHVCLPSRAGHTR 565
Query: 294 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 353
LLYRM+ DF + +P +Q+ WR+ A QVL EDL LVLGQQ+R+ G + W PV YDK
Sbjct: 566 LLYRMATDFLWWTELLPGIQHFWRYIAGQVLGEDLVLVLGQQDRLLRGGDTWRHPVSYDK 625
Query: 354 LGVRYRLWRDALEKGAKQLP 373
L VRYR WR++L P
Sbjct: 626 LAVRYRRWRNSLSLNGGAAP 645
>gi|75215802|sp|Q9XJ38.1|CAO_DUNSA RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|5478801|dbj|BAA82481.1| chlorophyll b synthase [Dunaliella salina]
Length = 463
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/356 (51%), Positives = 237/356 (66%), Gaps = 5/356 (1%)
Query: 16 SGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM 75
SG T + S + +G P+ S + ++ L+NFW+P F+ L+ M
Sbjct: 90 SGMASTSYPSHVPQPSQAVRRGPKPKDSRRLRSSLE-LEDGLRNFWYPTEFAKKLEPGMM 148
Query: 76 VPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCE 135
VPFD F PWV+FR + P C++++CAHRACPL LG V G +QCPYHGWE+ G C
Sbjct: 149 VPFDLFGVPWVLFRDEHSAPTCIKDSCAHRACPLSLGKVINGHVQCPYHGWEFDGSGACT 208
Query: 136 KMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL-LPPSGFEIHAEIVMELPI 193
KMPST++ V + +LPC E++G +W+WPGD PP P PP+G+++HAEI++++P+
Sbjct: 209 KMPSTRMCHGVGVAALPCVEKDGFVWVWPGDGPPPDLPPDFTAPPAGYDVHAEIMVDVPV 268
Query: 194 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCM 253
EHGLL++NLLDLAHAPFTHT+TFA+GW +P V+F L G WDPYPI M F PPC+
Sbjct: 269 EHGLLMENLLDLAHAPFTHTTTFARGWPIPEAVRFHA-TKMLAGDWDPYPISMSFNPPCI 327
Query: 254 VLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 312
LSTIG+S+PGK + G +C HLHQLHVC+PS TRLLYRMSLDF KHVPF+
Sbjct: 328 ALSTIGLSQPGKIMRGYKAEECKRHLHQLHVCMPSKEGHTRLLYRMSLDFWGWAKHVPFV 387
Query: 313 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
LW+ A QVL EDL LVLGQQ RM G + W P+ YDKL VRYR WR+ + G
Sbjct: 388 DVLWKKIAGQVLGEDLVLVLGQQARMIGGDDTWCTPMPYDKLAVRYRRWRNMVADG 443
>gi|238767606|dbj|BAH66642.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 338
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 172/312 (55%), Positives = 221/312 (70%), Gaps = 4/312 (1%)
Query: 63 PVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCP 122
P+ FS L ++T++P + F EPWV+FR +G C+Q+ CAHRACPL LGSV G + C
Sbjct: 1 PIEFSAQLVENTLIPLELFGEPWVLFRDAEGKAACLQDQCAHRACPLSLGSVQNGNVTCA 60
Query: 123 YHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPG-DEPPTATIPCLLPPSG 180
YHGW+++ G CE+MPST +NV +K+L E++GMI+ W G D+ P IP L PP+G
Sbjct: 61 YHGWQFNGQGDCEEMPSTPHCKNVGVKALQVTEKDGMIFAWTGEDDEPDIPIPELAPPAG 120
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 240
F IH+EI ME+P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P V+F L G WD
Sbjct: 121 FVIHSEITMEVPVEHGLLVENLLDLAHAPFTHTATFARGWPIPEAVRFHL-LDKLSGNWD 179
Query: 241 PYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS 299
PYPIDM F PP M S IG+++PGK+E G +C HLHQLHVCLP+ TRLLYRMS
Sbjct: 180 PYPIDMAFLPPVMTESKIGLNQPGKIERGVRCDECDKHLHQLHVCLPAKEGHTRLLYRMS 239
Query: 300 LDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
LDF ++ +P +Q +W+ A QVL EDLRLVLGQQ+RM G + W+ PV YDKL VRYR
Sbjct: 240 LDFMGWVRFIPGIQRVWKEVANQVLGEDLRLVLGQQDRMKRGGHTWSFPVPYDKLAVRYR 299
Query: 360 LWRDALEKGAKQ 371
WR+ L + Q
Sbjct: 300 RWRNGLAESKGQ 311
>gi|238767620|dbj|BAH66649.1| chlorophyllide a oxygenase [Mesostigma viride]
Length = 299
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 211/282 (74%), Gaps = 2/282 (0%)
Query: 91 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-NVKIKS 149
+DG C+++ CAHRACPL LG+V G CPYHGW+Y TDGKC KMP T+LR V++ +
Sbjct: 2 EDGRVACLRDECAHRACPLSLGTVENGHATCPYHGWQYDTDGKCTKMPQTRLRAQVRVST 61
Query: 150 LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 209
LP E +GMIW++PG P +P LPPS F +HAE+V+E+PIEHGL+++NLLDLAHAP
Sbjct: 62 LPVREHDGMIWVYPGSNEPPEHLPSFLPPSNFTVHAELVLEVPIEHGLMIENLLDLAHAP 121
Query: 210 FTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-G 268
FTHT TFAKGWSVP V F A L G+W+PYPI M+F PPCM +S IG++KPG+LE G
Sbjct: 122 FTHTETFAKGWSVPDSVNFKVAAQSLAGHWEPYPISMKFEPPCMTISEIGLAKPGQLEAG 181
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
+ + +C HLHQLHVC+P+ +TR+LYRM LDFA +K++P +Q +W A QVL EDL
Sbjct: 182 KFSGECKQHLHQLHVCMPAGEGRTRILYRMCLDFAHWVKYIPGIQNVWSGMATQVLGEDL 241
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 370
RLV GQQ+RM GA++W PV YDKLGVRYR WR A+E+ +
Sbjct: 242 RLVEGQQDRMLRGADIWYNPVAYDKLGVRYRSWRRAVERNTR 283
>gi|38488613|dbj|BAD02269.1| chlorophyllide a oxygenase [Prochlorothrix hollandica]
Length = 366
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 223/335 (66%), Gaps = 14/335 (4%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNT 101
SLNVS + N L+NFW+PV FS +L + F+ F++ WV+FR G C+ +
Sbjct: 3 NSLNVSATLDLANG-LRNFWYPVEFSKNLGMADPLGFELFDQCWVLFRDDQGTAACILDE 61
Query: 102 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 161
CAHRACPL LG V +GRIQCPYHGWEY G+C MPS Q + I +LP EQ GMIW+
Sbjct: 62 CAHRACPLSLGKVIQGRIQCPYHGWEYDRQGECVHMPSCQAISNPILTLPVMEQGGMIWV 121
Query: 162 WPGDEPPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
WPG + P A +P L P P F + AE+VM+L +EHGL+L+NLLDLAHAPFTHT TFAKG
Sbjct: 122 WPGTDEPGA-LPSLAPTLPDNFTLQAELVMDLEVEHGLMLENLLDLAHAPFTHTGTFAKG 180
Query: 220 WSVPSLVKFLTPASG-LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
W VP V+F A+ G+WDPYPI M F PPC V+STIG+ + C HL
Sbjct: 181 WPVPPFVRFANAATTPWTGHWDPYPIHMTFEPPCFVISTIGLRG---------KDCGRHL 231
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 338
HQ+H CLP + +TRLLYR++LDF L+ VP LW+H A +V+ EDLRLV GQQER+
Sbjct: 232 HQVHACLPRGQGRTRLLYRLALDFGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQERL 291
Query: 339 NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 373
GANVWN PVGYDKLGV YR WR+ +E+ P
Sbjct: 292 KGGANVWNQPVGYDKLGVAYRHWRNQVERHGSDWP 326
>gi|238767600|dbj|BAH66639.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 297
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 221/296 (74%), Gaps = 7/296 (2%)
Query: 64 VAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 123
V F++ L D MVPF+CFEE WV+FR +DG GC+++ CAHRACPL LG+V G+ C Y
Sbjct: 2 VEFTSRLGKDIMVPFECFEESWVLFRDEDGKAGCIKDECAHRACPLSLGTVENGQATCAY 61
Query: 124 HGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC--LLPP 178
HGW++ST G+C K+PS R V ++++P EQ+GMIWIWPGDE P IP +LPP
Sbjct: 62 HGWQFSTGGECTKIPSVGARGCSGVGVRAMPTVEQDGMIWIWPGDEKPAEHIPSKEVLPP 121
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQG 237
+G +HAEIV+++P+EHGLLL+NLLDLAHAPFTHTSTFAKGW+VP LVKF T L G
Sbjct: 122 AGHTLHAEIVLDVPVEHGLLLENLLDLAHAPFTHTSTFAKGWAVPELVKFSTDKVRALGG 181
Query: 238 YWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
W+PYPIDM F PPCMVLSTIG+++PGK++ G +C HLHQLHVC+PS KTRLLY
Sbjct: 182 AWEPYPIDMSFEPPCMVLSTIGLAQPGKVDAGVRASECEKHLHQLHVCMPSGAGKTRLLY 241
Query: 297 RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYD 352
RM LDF LK+VP M +W A QVL EDLRLVLGQQ+R+ G +VW+ P+ YD
Sbjct: 242 RMHLDFMPFLKYVPGMHLVWEAMANQVLGEDLRLVLGQQDRLQRGGDVWSNPMEYD 297
>gi|238767608|dbj|BAH66643.1| chlorophyllide a oxygenase [Prasinoderma coloniale]
Length = 304
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 210/297 (70%), Gaps = 13/297 (4%)
Query: 89 RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVKI 147
R +G+ GCV+++CAHRACPL LG G++QCPYHGWE+ TDG+C K PST +L+N+++
Sbjct: 1 RDANGVAGCVRDSCAHRACPLSLGKNVGGKVQCPYHGWEFETDGRCTKTPSTNELKNIRV 60
Query: 148 KSLPCFEQEGMIWIWPGDEPPTA---TIPCLLPPSG-FEIHAEIVMELPIEHGLLLDNLL 203
++LP E++GMIW++PG+E P L PP F IHAEIV+ +P+EHGLL++NLL
Sbjct: 61 EALPVVERDGMIWVYPGEEDPPEDHQNFTALAPPGDEFTIHAEIVLTVPVEHGLLMENLL 120
Query: 204 DLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-------GLQGYWDPYPIDMEFRPPCMVLS 256
DLAHAPFTHTSTFAKGWSVP V F T + GL G W PYPIDM F+PPCMVLS
Sbjct: 121 DLAHAPFTHTSTFAKGWSVPDRVDFKTVKNAVAQQIGGLGGEWQPYPIDMTFQPPCMVLS 180
Query: 257 TIGISKPGKLEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 315
IG+ KPG++E + C HLHQLHVCLP+ +TRLLYRMSLDFA K++PF+
Sbjct: 181 QIGLVKPGQVEAETRASDCDRHLHQLHVCLPAKDGETRLLYRMSLDFAKFAKNLPFVSEF 240
Query: 316 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 372
W A QVL EDL LV GQQ M G +VW+ PV YDKLGVRYR WR ++ G L
Sbjct: 241 WEELANQVLGEDLVLVEGQQRNMKAGMDVWSNPVAYDKLGVRYRRWRTGVQYGNPSL 297
>gi|238767610|dbj|BAH66644.1| chlorophyllide a oxygenase [Picocystis salinarum]
Length = 318
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 208/291 (71%), Gaps = 13/291 (4%)
Query: 88 FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNV 145
FR ++G CV + C HRACPL +G V +G I CPYHGWE + +G C MP Q+
Sbjct: 1 FRDQEGKAVCVHDECPHRACPLSIGKVIDGNIACPYHGWEVNGEGVCVNMPQVTPQVEAG 60
Query: 146 K--IKSLPCFEQEGMIWIWPGDE----PPTATIPCLLPPS--GFEIHAEIVMELPIEHGL 197
+ ++ LPC E GMIWIW G++ PP + LLPP+ GF +HAEI M++P+EHGL
Sbjct: 61 RPCVQKLPCEEVGGMIWIWTGEDGIPIPPVES-DRLLPPTNKGFSLHAEIAMDVPVEHGL 119
Query: 198 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLS 256
L++NLLDLAHAPFTHTSTFAKGWSVP LV F T A+ L G W+PYPIDM F PPCM LS
Sbjct: 120 LIENLLDLAHAPFTHTSTFAKGWSVPDLVNFQTAAARALAGNWEPYPIDMSFEPPCMTLS 179
Query: 257 TIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 315
TIG+++PGKLE G QC HLHQ+HVCLP+ K TRLLYRM LDF K+VP +Q L
Sbjct: 180 TIGLAQPGKLESGVRQSQCKNHLHQMHVCLPAGPKSTRLLYRMHLDFLGWAKNVPGIQKL 239
Query: 316 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 366
W + A QVL EDLRLVLGQQ+R+ G +VW PV YDKLGVRYR WR++L+
Sbjct: 240 WEYMAGQVLGEDLRLVLGQQDRLERGGDVWGHPVPYDKLGVRYRRWRNSLD 290
>gi|42571759|ref|NP_973970.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193915|gb|AEE32036.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 433
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 186/226 (82%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLL R + D+ +S + S LD K KSLNVSGPV PY+ LKNF
Sbjct: 161 MEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNF 220
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVAF+ DLK DTMVP +CFE+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQ
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 180
CPYHGWEYSTDG+C+KMPST+L VKIKSLPC EQEGMIWIWPGDEPP +P L PPSG
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSG 340
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 226
F IHAE+VM+LP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVP +
Sbjct: 341 FLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPRFL 386
>gi|238767602|dbj|BAH66640.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 305
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 208/287 (72%), Gaps = 8/287 (2%)
Query: 91 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKI 147
+DG CV++ CAHRACPL LG+V G+ C YHGW++ DG C ++PS R + I
Sbjct: 2 EDGTAACVKDECAHRACPLSLGTVEGGKATCAYHGWKFGGDGACTEIPSVGSRGAAGISI 61
Query: 148 KSLPCFEQEGMIWIWPGDEPPTATIP-CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA 206
+SLP E +G++W+WPG P A IP L P GF +HAEIV+++P+EHGLLL+NLLDLA
Sbjct: 62 RSLPVQEVDGLVWVWPGSAEPAAEIPRDLRVPEGFTLHAEIVLDVPVEHGLLLENLLDLA 121
Query: 207 HAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
HAPFTHTSTFAKGW+VP LVKF T L G WDPYPIDM F PPC VLS IG+ KPG+
Sbjct: 122 HAPFTHTSTFAKGWAVPDLVKFSTDKMRTLGGAWDPYPIDMSFEPPCHVLSLIGLEKPGE 181
Query: 266 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ G +C HLHQLHVCLPS +TRLLYRMSLDF +KHVP ++ +W A QVL
Sbjct: 182 VASGTRAGECERHLHQLHVCLPSREGQTRLLYRMSLDFLPWVKHVPGIKMVWEAMAAQVL 241
Query: 325 NEDLRLVLGQQERM-NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 370
EDLRLV GQQ+RM N GA +W P+GYD+LGV+YR+WR++L GAK
Sbjct: 242 GEDLRLVAGQQDRMVNEGAQIWGNPMGYDELGVKYRMWRNSL-AGAK 287
>gi|238767604|dbj|BAH66641.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 264
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 92 DGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSL 150
DGI CV++ CAHRACPL LG V +G+++CPYHGW Y+ G+C KMPST+ + V +KSL
Sbjct: 3 DGIAACVKDECAHRACPLSLGQVVDGQVECPYHGWAYNRGGECTKMPSTRYCKGVGVKSL 62
Query: 151 PCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 210
EQ+G+IW+WPG PT +P P GF HAE+++++P+EHGLL++NLLDLAHAPF
Sbjct: 63 TVQEQDGLIWVWPGGAEPTTEVPRFHAPEGFTTHAELMLDVPVEHGLLIENLLDLAHAPF 122
Query: 211 THTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQ 269
THTSTFAKGWS+P LV + L G WDPYPIDM F PC+ LSTIG+++PG++E G
Sbjct: 123 THTSTFAKGWSIPELVNIKMNGA-LVGNWDPYPIDMSFEAPCITLSTIGLARPGQVEKGL 181
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 329
C HL+Q+HVCLPS + TRLLYRM+LDF +++VPF+ +W+ A QVL EDLR
Sbjct: 182 RAEDCPKHLYQMHVCLPSKKGHTRLLYRMALDFMPWVQYVPFINSVWQQMANQVLGEDLR 241
Query: 330 LVLGQQERMNNGANVWNLPVGYD 352
LVLGQQERM G++ W PV YD
Sbjct: 242 LVLGQQERMAVGSDTWANPVSYD 264
>gi|5478805|dbj|BAA82483.1| chlorophyll b synthase [Prochloron didemni]
Length = 276
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/285 (53%), Positives = 191/285 (67%), Gaps = 13/285 (4%)
Query: 69 DLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY 128
++ T +PF+ F+ W++FR ++ GC+ + CAHRAC L LG V GR+QC YHGWEY
Sbjct: 2 NVNTTTPMPFELFDRSWILFRDRNSNIGCIHDRCAHRACTLSLGKVVNGRVQCAYHGWEY 61
Query: 129 STDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP--PSGFEIHAE 186
+T+G CE MPS + +K+LP EQ GMIW+WPG P +P L P P F + AE
Sbjct: 62 NTEGTCEVMPSCKQTKAAVKALPAIEQSGMIWVWPGSGVP-GELPKLAPAIPENFTLQAE 120
Query: 187 IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWDPYPID 245
I MEL +EHGL ++NLLDLAHAPFTHT TFAKGW VP V+F P + L G+WDPYPID
Sbjct: 121 ITMELDVEHGLFMENLLDLAHAPFTHTGTFAKGWPVPDFVRFANLPKTPLTGHWDPYPID 180
Query: 246 MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 305
M F PPC V+STIG+ R C HLHQ+HVCLP + KTRLLYR++LDF
Sbjct: 181 MSFEPPCYVISTIGL---------RGRDCGRHLHQVHVCLPKGKGKTRLLYRLALDFYKW 231
Query: 306 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 350
L+ VP M W H A++V+ ED+RLV GQQ+ + G NVWN PVG
Sbjct: 232 LRFVPGMNLFWEHMAQRVIGEDIRLVRGQQKSLQEGGNVWNQPVG 276
>gi|71534968|gb|AAZ32888.1| putative chlorophyll synthase [Medicago sativa]
Length = 219
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/200 (83%), Positives = 183/200 (91%)
Query: 38 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGC 97
+ P+KSLNVSGPVQ Y+ LKNFW+PVAFS DLKDD+M+P +CFEEPWVIFRGKDG PGC
Sbjct: 7 RKPKKSLNVSGPVQSYHPNLKNFWYPVAFSADLKDDSMIPMECFEEPWVIFRGKDGKPGC 66
Query: 98 VQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEG 157
VQNTCAHRACPLHLGSVNEGRI CPYHGWEY+TDGKCEKMPST++ NVKIKS+PCFE+EG
Sbjct: 67 VQNTCAHRACPLHLGSVNEGRIACPYHGWEYTTDGKCEKMPSTRMLNVKIKSIPCFEKEG 126
Query: 158 MIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
MIWIWPG +PP ++P LLPPSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFA
Sbjct: 127 MIWIWPGSDPPAPSLPSLLPPSGFIVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFA 186
Query: 218 KGWSVPSLVKFLTPASGLQG 237
KGWS PS V FLTPASGLQG
Sbjct: 187 KGWSGPSFVNFLTPASGLQG 206
>gi|238006758|gb|ACR34414.1| unknown [Zea mays]
Length = 196
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/187 (87%), Positives = 174/187 (93%), Gaps = 1/187 (0%)
Query: 189 MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF 248
MELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF
Sbjct: 1 MELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF 60
Query: 249 RPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH 308
RPPCMVLSTIGISKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKH
Sbjct: 61 RPPCMVLSTIGISKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKH 120
Query: 309 VPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
VP M LW HFAE+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRLWRDA+E+G
Sbjct: 121 VPLMHLLWSHFAEKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERG 180
Query: 369 A-KQLPF 374
A +LPF
Sbjct: 181 ADDRLPF 187
>gi|5478803|dbj|BAA82482.1| chlorophyll b synthase [Prochlorothrix hollandica]
Length = 276
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/285 (54%), Positives = 191/285 (67%), Gaps = 13/285 (4%)
Query: 69 DLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY 128
DL + F+ F++ WV+FR G C+ + CAHRACPL LG V +GRIQCPYHGWEY
Sbjct: 2 DLGMADPLGFELFDQCWVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQCPYHGWEY 61
Query: 129 STDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP--PSGFEIHAE 186
G+C MPS Q + I +LP EQ GMIW+WPG + P A +P L P P F + AE
Sbjct: 62 DRQGECVHMPSCQAISNPILTLPVMEQGGMIWVWPGTDEPGA-LPSLAPTLPDNFTLQAE 120
Query: 187 IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG-LQGYWDPYPID 245
+VM+L +EHGL+L+NLLDLAHAPFTHT TFAKGW VP V+F A+ G+WDPYPI
Sbjct: 121 LVMDLEVEHGLMLENLLDLAHAPFTHTGTFAKGWPVPPFVRFANAATTPWTGHWDPYPIH 180
Query: 246 MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 305
M F PPC V+STIG+ + C HLHQ+H CLP + +TRLLYR++LDF
Sbjct: 181 MTFEPPCFVISTIGL---------RGKDCGRHLHQVHACLPRGQGRTRLLYRLALDFGHW 231
Query: 306 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 350
L+ VP LW+H A +V+ EDLRLV GQQER+ GANVWN PVG
Sbjct: 232 LRWVPGTHCLWQHLANRVIQEDLRLVQGQQERLKGGANVWNQPVG 276
>gi|383162350|gb|AFG63810.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162356|gb|AFG63813.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162362|gb|AFG63816.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162366|gb|AFG63818.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162368|gb|AFG63819.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162372|gb|AFG63821.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162374|gb|AFG63822.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162376|gb|AFG63823.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162378|gb|AFG63824.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
Length = 152
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 140/149 (93%)
Query: 226 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 285
VKF+TPA+GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK+EG++T+ C+THLHQLHVC+
Sbjct: 1 VKFMTPATGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKIEGRSTQNCSTHLHQLHVCI 60
Query: 286 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVW 345
PSSR+KTRLLYRMSLDFA +L+H+PFM LWRHFA++VLNEDLRLV+GQQ+RM G+NVW
Sbjct: 61 PSSRQKTRLLYRMSLDFAPLLQHIPFMHILWRHFADKVLNEDLRLVIGQQDRMVRGSNVW 120
Query: 346 NLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
NLPV YDKLG+RYR+WR+A+E G ++LPF
Sbjct: 121 NLPVSYDKLGIRYRIWRNAVEDGQQRLPF 149
>gi|383162346|gb|AFG63808.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162348|gb|AFG63809.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162352|gb|AFG63811.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162354|gb|AFG63812.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162358|gb|AFG63814.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162360|gb|AFG63815.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162364|gb|AFG63817.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162370|gb|AFG63820.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
Length = 152
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 116/149 (77%), Positives = 140/149 (93%)
Query: 226 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 285
VKF+TPA+GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK+EG++T+ C+THLHQLHVC+
Sbjct: 1 VKFMTPATGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKIEGRSTQNCSTHLHQLHVCI 60
Query: 286 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVW 345
PSSR+KTRLLYRMSLDFA +L+H+PF+ LWRHFA++VLNEDLRLV+GQQ+RM G+NVW
Sbjct: 61 PSSRQKTRLLYRMSLDFAPLLQHIPFIHILWRHFADKVLNEDLRLVIGQQDRMVRGSNVW 120
Query: 346 NLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
NLPV YDKLG+RYR+WR+A+E G ++LPF
Sbjct: 121 NLPVSYDKLGIRYRIWRNAVEDGQQRLPF 149
>gi|308809960|ref|XP_003082289.1| chlorophyll a oxygenase (ISS) [Ostreococcus tauri]
gi|116060757|emb|CAL57235.1| chlorophyll a oxygenase (ISS) [Ostreococcus tauri]
Length = 381
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 213/382 (55%), Gaps = 74/382 (19%)
Query: 15 TSGTD-QTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPY-NTRLKNFWFPVAFSTDLKD 72
+GTD +T + + +++ +G L ++ + P +++++ FWFPV F + K+
Sbjct: 32 ATGTDAETARARVETVKAVVKPRGGLRKEFADERSLATPREDSKVREFWFPVMFESKFKE 91
Query: 73 -DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTD 131
D F+ +E WV+ + G EY
Sbjct: 92 NDDEFEFNLLDEMWVLRK---------------------------------LTGSEYV-- 116
Query: 132 GKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPC-LLPPSGFEIHAEIVM 189
CE S + + +K +G++ +WPG E PT +P PPSG+ IHAE+++
Sbjct: 117 --CESKKSRRTLSTGVK-------DGLVMVWPGTCEAPTEQLPSHFAPPSGYTIHAELII 167
Query: 190 E-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP----------------A 232
+ +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP++VKF + A
Sbjct: 168 DDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNMVKFASSKLRKSGDGWHDMGNFLA 227
Query: 233 SGL-QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQCATHLHQLHVC 284
+G +G W PYPIDM+F PCMV S IG+++ G + EG +C HLHQLHVC
Sbjct: 228 NGKSEGSWKPYPIDMKFLAPCMVDSHIGLAQAGAVGSGAQFKEGVTADECPKHLHQLHVC 287
Query: 285 LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANV 344
LPS+ +TRLLYRMSLDFA+ +++P ++ +W A QVL EDLRLV+GQQ+RM G V
Sbjct: 288 LPSAPGRTRLLYRMSLDFANWAQYIPGIEMIWTEMANQVLGEDLRLVVGQQDRMQRGGRV 347
Query: 345 WNLPVGYDKLGVRYRLWRDALE 366
W PV YDKLG+ YR WR+ +E
Sbjct: 348 WAHPVAYDKLGLHYRRWRNVME 369
>gi|424513736|emb|CCO66358.1| chlorophyllide a oxygenase [Bathycoccus prasinos]
Length = 421
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 192/359 (53%), Gaps = 79/359 (22%)
Query: 54 NTRLKNFWFPVAFSTDLKD--------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
++ L+NFW+PV F + L+ T+V F E WVI R +D G ++ C
Sbjct: 98 SSALRNFWYPVTFVSKLEKAIEEVGDAKTVVECTFFGEKWVIKRRQDFETGEMKWVC--- 154
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGD 165
+ ++EG + LP Q+G+ +WPG
Sbjct: 155 -----MNKMDEGNV------------------------------LPSQVQDGLFMVWPGK 179
Query: 166 EPPTATIP-CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
P+ IP PPSG+ +HAE+V+E +P++ LL++NLLDLAHAPFTHT TFAKGW VP
Sbjct: 180 AKPSEEIPEWFKPPSGYTVHAELVIENVPVDAALLMENLLDLAHAPFTHTGTFAKGWGVP 239
Query: 224 SLVKFLT-----PASG-------------------LQGYWDPYPIDMEFRPPCMVLSTIG 259
++V+F T P G +G W PYPIDM+F PCMV S IG
Sbjct: 240 NMVEFATKQLRKPGDGWHDMATFLSGRSGGGAGYSAEGSWKPYPIDMKFITPCMVDSHIG 299
Query: 260 ISKPGKL-------EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 312
+++PG EG C HLHQLHVC+P KTRLLYRMSLDFA K VP +
Sbjct: 300 MAQPGAAGAGAQFKEGDTCTSCEKHLHQLHVCVPQEEGKTRLLYRMSLDFAQWAKWVPGI 359
Query: 313 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 371
Q +W A QVL EDLRLV GQQ+RMN G VW PV YDK+G+ YR WR+ + K +Q
Sbjct: 360 QLVWMEMANQVLGEDLRLVEGQQDRMNRGGRVWANPVQYDKIGLVYRNWRNHVVKQEQQ 418
>gi|413944185|gb|AFW76834.1| hypothetical protein ZEAMMB73_287624 [Zea mays]
Length = 445
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 130/137 (94%)
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 142
E WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++
Sbjct: 293 EQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKM 352
Query: 143 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 202
NV+I+SLPCFEQEGMIWIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EH LLLDNL
Sbjct: 353 LNVRIQSLPCFEQEGMIWIWPGDDPPKATIPSLLPPSGFIVHAEIVMELPVEHVLLLDNL 412
Query: 203 LDLAHAPFTHTSTFAKG 219
LDLAHAPFTHTSTFAKG
Sbjct: 413 LDLAHAPFTHTSTFAKG 429
>gi|255078366|ref|XP_002502763.1| chlorophyll a oxygenase [Micromonas sp. RCC299]
gi|226518029|gb|ACO64021.1| chlorophyll a oxygenase [Micromonas sp. RCC299]
Length = 345
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 191/337 (56%), Gaps = 50/337 (14%)
Query: 57 LKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
++NFW+PV F + L K D F F E W + R + + A C + S+
Sbjct: 20 IRNFWYPVHFWSKLTKGDASPDFPLFGEEWTLVRTDAAGVAAARASIAFPGCD-EMASIG 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+G GW C + + LP ++G++ +WPG P A +P
Sbjct: 79 DG-------GW------VCRSVADPAMH------LPIGVKDGLVMVWPGSCKPDAALPGT 119
Query: 176 L-PPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP-- 231
PP G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 120 FKPPEGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTARL 179
Query: 232 ----------ASGLQ--------GYWDPYPIDMEFRPPCMVLSTIGISKPGKL------- 266
A+GL G W+PYPIDM+F PCMV S IG+S+ G
Sbjct: 180 RKPGDGWHDMANGLNLSALGGQSGSWNPYPIDMKFVVPCMVDSHIGMSQAGAAGGGAQFE 239
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
EG +CA HLHQLHVC+PS+ +TRLLYRMSLDFA K VP ++ +W A QVL E
Sbjct: 240 EGVQCAECANHLHQLHVCVPSTPGRTRLLYRMSLDFAGWAKWVPGIELVWTEMANQVLGE 299
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 363
DLRLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 300 DLRLVTGQQDRMQRGGRVWAHPVAYDKLGLVYRRWRN 336
>gi|238767624|dbj|BAH66651.1| chlorophyllide a oxygenase [Micromonas pusilla]
Length = 324
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 189/335 (56%), Gaps = 50/335 (14%)
Query: 59 NFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
NFW+PV F + L K D F F E W + R + + A C + S+ +G
Sbjct: 1 NFWYPVHFWSKLTKGDASPDFPLFGEEWTLVRTDAAGVAAARASIAFPGCD-EMASIGDG 59
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL- 176
C + P+T L P ++G++ +WPG P A +P
Sbjct: 60 GWVC-----------RSVADPATHL--------PIGVKDGLVMVWPGSCKPDAALPGTFK 100
Query: 177 PPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP---- 231
PP G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 101 PPEGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTARLRK 160
Query: 232 --------ASGLQ--------GYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EG 268
A+GL G W+PYPIDM+F PCMV S IG+S+ G EG
Sbjct: 161 PGDGWHDMANGLNLAALGGQSGSWNPYPIDMKFVVPCMVDSHIGMSQAGAAGGGAQFEEG 220
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
+CA HLHQLHVC+PS+ +TRLLYRMSLDFA K VP ++ +W A QVL EDL
Sbjct: 221 VQCAECANHLHQLHVCVPSTPGRTRLLYRMSLDFAGWAKWVPGIELVWTEMANQVLGEDL 280
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 363
RLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 281 RLVTGQQDRMQRGGRVWAHPVAYDKLGLVYRRWRN 315
>gi|238767618|dbj|BAH66648.1| chlorophyllide a oxygenase [Mantoniella squamata]
Length = 329
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 167/265 (63%), Gaps = 27/265 (10%)
Query: 131 DGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PPSGFEIHAEIVM 189
DG + ST + LP Q+G++ +WPG P A +P PP G+ +HAE+++
Sbjct: 57 DGWVCRSKSTTETGTPVSHLPIGLQDGLVMVWPGTCKPEAKLPTTFKPPEGYTVHAELII 116
Query: 190 E-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP------------ASGL- 235
E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T A+GL
Sbjct: 117 EDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTSKMRKPGDGWHDMATGLK 176
Query: 236 -----QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQCATHLHQLHV 283
QG W+PYPIDM+F PCMV S IG+S+ G EG +CA HLHQLHV
Sbjct: 177 GLGSQQGSWNPYPIDMKFVTPCMVDSHIGMSQAGAAGGGAQFEEGVQCVECANHLHQLHV 236
Query: 284 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 343
C PS +TRLLYRMSLDFA K+VP ++ +W A QVL EDLRLV GQQ+RM G
Sbjct: 237 CCPSKPGRTRLLYRMSLDFAGWAKYVPGIELVWTEMANQVLGEDLRLVTGQQDRMARGGR 296
Query: 344 VWNLPVGYDKLGVRYRLWRDALEKG 368
VW PV YDKLG+ YR WR+ + G
Sbjct: 297 VWAHPVAYDKLGLVYRRWRNMVVDG 321
>gi|238767616|dbj|BAH66647.1| chlorophyllide a oxygenase [Dolichomastix tenuilepis]
Length = 315
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 156/241 (64%), Gaps = 22/241 (9%)
Query: 148 KSLPCFEQEGMIWIWPGDEPPTATIP-CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDL 205
+ LP Q+G++ +WPG P +P PP G+ +HAE+V+E +P EHGLL++NLLDL
Sbjct: 47 QELPVGVQDGLVMVWPGMAAPAEELPKQFAPPEGYIVHAELVVETVPTEHGLLIENLLDL 106
Query: 206 AHAPFTHTSTFAKGWSVPSLVKFL-------------TPASGLQGYWDPYPIDMEFRPPC 252
AHAPFTHT TFAKGW VP LVKF+ T G QG W+PYPIDM F PC
Sbjct: 107 AHAPFTHTGTFAKGWGVPDLVKFVARKNQPEGWHDIATFLKGAQGSWNPYPIDMSFEAPC 166
Query: 253 MVLSTIGISKPGKL-------EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 305
MVLS IG+++ G + G C HLHQLH+C+P KTRLLYRM+LDFA
Sbjct: 167 MVLSYIGLAQAGAVGGGAQFERGSRASDCENHLHQLHICVPRKGGKTRLLYRMALDFAGW 226
Query: 306 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
+HVP M +WR A QVL+EDLRLV+GQQ+RM G VW PV YD+ + YR WR+++
Sbjct: 227 ARHVPGMHNVWREMANQVLDEDLRLVVGQQDRMERGGRVWGHPVAYDRCALSYRRWRNSV 286
Query: 366 E 366
E
Sbjct: 287 E 287
>gi|413944184|gb|AFW76833.1| hypothetical protein ZEAMMB73_287624 [Zea mays]
Length = 467
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 138/176 (78%), Gaps = 14/176 (7%)
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 142
E WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++
Sbjct: 293 EQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKM 352
Query: 143 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---------IVMELPI 193
NV+I+SLPCFEQEGMIWIWPGD+PP ATIP LLPPSGF +HAE IVMELP+
Sbjct: 353 LNVRIQSLPCFEQEGMIWIWPGDDPPKATIPSLLPPSGFIVHAERCVLLIIQQIVMELPV 412
Query: 194 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFR 249
EH LLLDNLLDLAHAPFTHTSTFAKG + L W P ++ + R
Sbjct: 413 EHVLLLDNLLDLAHAPFTHTSTFAKGLECSKFGEVLNTC-----IWAPRVLNEDLR 463
>gi|145352978|ref|XP_001420810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581045|gb|ABO99103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 157/223 (70%), Gaps = 11/223 (4%)
Query: 155 QEGMIWIWPG-DEPPTATIPC-LLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFT 211
++G++ +WP + PT +P P G+ IHAE+++E +P+EHGLL++NLLDLAHAPFT
Sbjct: 1 RDGLVMVWPSMNCGPTEELPSHFAAPEGYTIHAELIIEDVPVEHGLLMENLLDLAHAPFT 60
Query: 212 HTSTFAKGWSVPSLVKFLTPASGLQG-YWDPYPIDMEFRPPCMVLSTIGISKPGKL---- 266
HT TFAKGW VP++VKF + G W PYPIDM+F PCMV S IG+++ G +
Sbjct: 61 HTGTFAKGWGVPNMVKFASRKLRKDGDGWKPYPIDMKFLAPCMVDSHIGLAQAGAVGKGA 120
Query: 267 ---EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
EG + +C HLHQLHVCLPS+ TRLLYRMSLDFAS ++VP ++Y+W A QV
Sbjct: 121 QFKEGVSALECEKHLHQLHVCLPSTPGHTRLLYRMSLDFASWAQYVPGIEYIWTEMANQV 180
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 366
L EDLRLV GQQ+RM GA VW PV YDKLG+ YR WR+ ++
Sbjct: 181 LGEDLRLVTGQQDRMQRGARVWAHPVAYDKLGLHYRRWRNVID 223
>gi|303283166|ref|XP_003060874.1| chlorophyll a oxygenase [Micromonas pusilla CCMP1545]
gi|226457225|gb|EEH54524.1| chlorophyll a oxygenase [Micromonas pusilla CCMP1545]
Length = 390
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 187/338 (55%), Gaps = 51/338 (15%)
Query: 57 LKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
++N+W+P+ F + L K D F F E W + + A A +G
Sbjct: 47 IRNYWYPIHFISKLNKGDAATSFVLFGERWEL---------VADDDAAVAAAKTAVGVFG 97
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+ H DG ++ + + R+ + LP Q+G++ P A
Sbjct: 98 PEYAETQAH----LVDGAAQRW-TCRSRDDATRFLPIGLQDGLVM------PDVALPTTF 146
Query: 176 LPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP--- 231
PP+G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 147 TPPAGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPTFVEFVTSKLR 206
Query: 232 ---------ASGL----------QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL------ 266
A GL QG W+PYPIDM+F PCMV S IG+S+ G
Sbjct: 207 REGDGWQDMARGLTREGIGLGSQQGSWNPYPIDMKFVTPCMVDSHIGMSQAGAAGKGAQF 266
Query: 267 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
EG +C+ HLHQLHVC+PS +TRLLYRM+LDFA K+VP ++ +W A QVL
Sbjct: 267 EEGVQCAECSNHLHQLHVCVPSEPGRTRLLYRMALDFAGWAKYVPGIELVWTEMANQVLG 326
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 363
EDLRLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 327 EDLRLVTGQQDRMRRGGRVWAHPVAYDKLGLVYRRWRN 364
>gi|303277817|ref|XP_003058202.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226460859|gb|EEH58153.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 289
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 171/298 (57%), Gaps = 37/298 (12%)
Query: 75 MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC 134
M+PFD F PWV FR +DG+ GC+++ CAHRACP+ LG V EGR+QCPYHGWEY++ G+C
Sbjct: 1 MIPFDLFNVPWVAFRDQDGMAGCIKDECAHRACPISLGKVVEGRVQCPYHGWEYTSGGEC 60
Query: 135 EKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPG------------DEPPTATIPCLLPPSG 180
+KMPS + L NV + + P E++G++++W G + PP+A PPSG
Sbjct: 61 KKMPSIKNLLPNVYVDAAPIVERDGLLYVWAGVWEPERAEEILSELPPSAAT---APPSG 117
Query: 181 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV-PSLVKFLTPASGLQGYW 239
F AE+ +++P++ +L L+D PFT T V P ++ A L+G+
Sbjct: 118 FAAMAEVTVDVPLDAPAILSRLMDENKVPFTRVDTTTLSDDVFPKVI-----AKVLRGFG 172
Query: 240 DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS 299
P P +EF P C++ STIG+ G GQ+ ++HQ HV LPS K R+LYR+S
Sbjct: 173 KPAPKRVEFTPACILDSTIGLDGVG---GQD-----WNVHQTHVVLPSRPGKARVLYRLS 224
Query: 300 LDF---ASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERMNNGANVWNLPVGYDK 353
+DF A + + V +W++ AE +L E L + G + E + G ++ YD+
Sbjct: 225 VDFVVGAEIARTV--GGQVWQNLAEMILQEQLEGIRGGRFEDDSVGEQAADVSQSYDE 280
>gi|145348528|ref|XP_001418699.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578929|gb|ABO96992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 166/315 (52%), Gaps = 32/315 (10%)
Query: 41 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
R + V G + + R ++WFPV FS +L+D D +V FD F PWV+FRG+DG GCV+
Sbjct: 55 RGARGVDGARRTRDAR--DYWFPVCFSGNLRDKDALVAFDLFNVPWVLFRGRDGEVGCVK 112
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-LRNVKIKSLPCFEQEGM 158
+ C HRACPL LG V +GR+QCPYHGWEY T+G+C KMPS L+NV L E++GM
Sbjct: 113 DECCHRACPLSLGKVVDGRVQCPYHGWEYETNGECAKMPSCSFLKNVFADELRVIERDGM 172
Query: 159 IWIWPGDEPPT------------------ATIPCLLPPS-GFEIHAEIVMELPIEHGLLL 199
I++W G+ P A P + GF AE++ ++ ++ +++
Sbjct: 173 IFVWAGESDPADFVGPEAACESWDEDVYEANEPGMFTTGEGFVTMAEVIADVKLDSDVVV 232
Query: 200 DNLLDL---AHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS 256
+ LLD+ A +G P L GY D P + F+P C++ S
Sbjct: 233 ERLLDITERARREPVSVKNRGRGALFPVDGTRLISKVLRIGY-DAVPQSVVFKPSCVIAS 291
Query: 257 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 316
TI + +P G T + + QLHVCLP+ TR+L+RM+ DF +W
Sbjct: 292 TIAL-RPRVGGGDGT---SMQVEQLHVCLPAKPGLTRVLFRMAFDFVPEGAQNAAGD-VW 346
Query: 317 RHFAEQVLNEDLRLV 331
++ A QVL E+L V
Sbjct: 347 KNLAMQVLQEELEDV 361
>gi|255071899|ref|XP_002499624.1| chlorophyllide a oxygenase [Micromonas sp. RCC299]
gi|226514886|gb|ACO60882.1| chlorophyllide a oxygenase [Micromonas sp. RCC299]
Length = 436
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 29/291 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+ WFPVAF+ L + TM+PFD F PWV+FR DG GC+++ CAHRACPL LG + G
Sbjct: 135 RAHWFPVAFAAGLDETTMIPFDLFNVPWVMFRDADGNAGCIKDECAHRACPLSLGKLVNG 194
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPT------ 169
+ QCPYHGWEY+T G+C KMPS + L V + + P E++G +++W G P
Sbjct: 195 KAQCPYHGWEYTTGGECVKMPSIKKMLPGVYVDAAPVVERDGFLYLWAGKWEPGIEDEVL 254
Query: 170 ATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLD-LAHAPFTHTSTF----AKGWSV 222
A P L PP GF AE+ +++P+E +L L+ T T +F AK S
Sbjct: 255 AKTPRRSLAPPQGFTPMAEVTVDIPMEAEEVLSRLMAPGGRTSRTATVSFDVVDAKRISD 314
Query: 223 PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK-PGKLEGQNTRQCATHLHQL 281
K + A+ L+G P P F P C++ ST+G+ PG ++HQ+
Sbjct: 315 SVFPKIV--ANVLRGLRKPVPRTATFLPACVLDSTVGLEDGPGDW----------NVHQM 362
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFM-QYLWRHFAEQVLNEDLRLV 331
HV LP+ + RLL+R+S+DF +V + + +W + A+ VL E L V
Sbjct: 363 HVVLPARPGRCRLLFRLSVDFVAVPEIARAIGGEVWANLAQMVLKEQLEGV 413
>gi|413951241|gb|AFW83890.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 290
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Query: 1 MEALVNDRLL---QDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRL 57
ME LVNDRLL TS T PSTS + + K PR+ LNVSGPV+PYN L
Sbjct: 159 METLVNDRLLPPDGASSTSTAQPTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSL 217
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+PVAFS+DLKDDTMVP CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEG
Sbjct: 218 KNFWYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEG 277
Query: 118 RIQCPYHG 125
RIQCPYHG
Sbjct: 278 RIQCPYHG 285
>gi|412986659|emb|CCO15085.1| iron-sulfur cluster-binding protein, Rieske family [Bathycoccus
prasinos]
Length = 448
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 160/300 (53%), Gaps = 37/300 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEGRI 119
WFPVAFS ++K + M+PFD F PWV+FR K+G GCV++ CAHRACPL LG V EG I
Sbjct: 100 WFPVAFSKNVKFNQMIPFDLFNVPWVLFRTKEGEIGCVKDECAHRACPLSLGVQVEEGHI 159
Query: 120 QCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPGDEP---PTATIP- 173
QC YHGWE++T G+C KMPS T L+ V + +L E +GM+++W GDE P P
Sbjct: 160 QCAYHGWEFTTRGECVKMPSCKTVLKGVYVDALKTVEHDGMVFVWAGDEGEEVPDEKDPR 219
Query: 174 ----------CLLPPSGFEIH-------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
L P G ++ AEI +E E +L + L L
Sbjct: 220 HPTNLYVGEKSLRAPGGGSVNGTPFLTCAEIELEFENECDVLTERLFTLTQRAVNKAKLV 279
Query: 217 -AKGWSVPSLVKFL----TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 271
K S+ + + A L+ W P P +++F P ++S+I I ++ G +
Sbjct: 280 EEKTGSLEKIFDLVDVSAQVAKALRWGWRPVPNEIKFVPSSALVSSIDIQ---RMYGDSI 336
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
+ +HQ+HVCLPS KTR+L+RM+LDF + + +W + A Q+L E+L V
Sbjct: 337 PR---RVHQVHVCLPSRPGKTRVLFRMALDF--LPESAMVADKVWENLARQILKEELNDV 391
>gi|308806049|ref|XP_003080336.1| chloroplast chlorophyllide a oxygenase precursor (ISS)
[Ostreococcus tauri]
gi|116058796|emb|CAL54503.1| chloroplast chlorophyllide a oxygenase precursor (ISS), partial
[Ostreococcus tauri]
Length = 327
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 156/296 (52%), Gaps = 37/296 (12%)
Query: 66 FSTDLKDD--TMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 123
FS+ L+ D VPFD F+ PWV+FRGK G GCV++ C HRACPL LG V +GRIQCPY
Sbjct: 20 FSSALRFDKGASVPFDLFDVPWVLFRGKSGDVGCVKDECCHRACPLSLGKVVDGRIQCPY 79
Query: 124 HGWEYSTDGKCEKMPSTQ-LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC-------- 174
HGWEY T G+C KMPS + L+NV SL E++GMI++W G+ P I
Sbjct: 80 HGWEYETSGECVKMPSCRFLKNVYSDSLRVIERDGMIFVWAGESDPEDFIGAGSANAGES 139
Query: 175 --------------LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH----APFTHTSTF 216
P GF AE+ ++ ++ ++L+ LLD+ P + +
Sbjct: 140 WDEDVYEAGEEAGMFTPRDGFVTMAEVTADVKVDSNIVLERLLDITERARRVPVSVKNRQ 199
Query: 217 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 276
+ K ++ L+ ++P P + F+P C++ STI + +P KL G +
Sbjct: 200 RTPYEKADATKLISKV--LRIGYEPMPQSVVFKPSCVIASTIEL-RP-KLGGAGGGK-PM 254
Query: 277 HLHQLHVCLPSSRKKTRLLYRMSLDFA-SVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
+ QLHVCLP+ TR+L+RM+ DF +H W + A QVL E+L V
Sbjct: 255 LVEQLHVCLPAKPGVTRVLFRMAFDFVPEGAQHAA--GDTWNNLAMQVLQEELEDV 308
>gi|90658395|gb|ABD93562.2| chloroplast chlorophyll a oxygenase [Capsicum annuum]
gi|90658396|gb|ABD93563.2| chloroplast chlorophyll a oxygenase [Solanum tuberosum]
Length = 99
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 125 GWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIH 184
GWEYSTDGKCEKMPST+L NVKIK+LPCFEQEGMIWIWPG++PP AT+P LLPPSGF+IH
Sbjct: 1 GWEYSTDGKCEKMPSTRLLNVKIKALPCFEQEGMIWIWPGNDPPAATLPSLLPPSGFQIH 60
Query: 185 AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
AEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVP
Sbjct: 61 AEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 99
>gi|414878609|tpg|DAA55740.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 280
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Query: 35 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDG 93
K K PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DCFEE WVIFRGKDG
Sbjct: 188 AKNKQPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDG 247
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 125
PGCVQNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 248 RPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 279
>gi|414878610|tpg|DAA55741.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 279
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Query: 35 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDG 93
K K PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DCFEE WVIFRGKDG
Sbjct: 187 AKNKQPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDG 246
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 125
PGCVQNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 247 RPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 278
>gi|238767612|dbj|BAH66645.1| chlorophyllide a oxygenase [Pseudoscourfieldia marina]
Length = 151
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 109/152 (71%), Gaps = 10/152 (6%)
Query: 101 TCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEG 157
+CA RACPL LG V+E G +QCPYHGWEY G +KMPST RNVK+++L E +G
Sbjct: 1 SCAPRACPLSLGRVSEETGCVQCPYHGWEYDKSGTVKKMPSTPFARNVKVENLVVREADG 60
Query: 158 MIWIWPGDEPPTAT---IPCLLPP-SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
+IW WPG EP A IP LLP S FE HA+I +++P+EHGLL++NLLDL+HAPFTHT
Sbjct: 61 LIWAWPG-EPSRAESTPIPSLLPEGSNFEKHAQIQLDVPVEHGLLMENLLDLSHAPFTHT 119
Query: 214 STFAKGWSVPSLVKF-LTPASGL-QGYWDPYP 243
STFAKGW +P VKF L G+ G WDPYP
Sbjct: 120 STFAKGWPIPDSVKFHLDSGMGIVSGAWDPYP 151
>gi|440790930|gb|ELR12190.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 499
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 170/371 (45%), Gaps = 72/371 (19%)
Query: 57 LKNFWFPVAFSTDLKDDTMVP---------FDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 107
++N W+PVAF+++L F +P V+FR + G CVQ+ C+HR+
Sbjct: 10 MRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHRSA 69
Query: 108 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVK---IKSLPCFEQEGMIWIWP 163
PL +G+V +GR++C ++ + GKCE +PS R K + + P E ++W+WP
Sbjct: 70 PLSVGTVRDGRLEC-----KFGSGGKCESIPSEPTTRPGKPFCVYAYPTTEVYDLVWVWP 124
Query: 164 GDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
GD P +P F+ + + + + IEHGL ++N+LD +H PFTH T
Sbjct: 125 GD--PEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIEHGLFIENILDPSHLPFTHDGTL 182
Query: 217 AKGWSVPSL-VKFL---------TPAS---------------GL-QGYWD-----PYPID 245
+K + V+ L P S GL +G++ +P D
Sbjct: 183 SKRAKADEMKVEMLFDNVFGQAPAPRSSADDHQTDAHSHFTLGLPEGFYGMQAQAVWPAD 242
Query: 246 ME-------FRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 298
F+ PC+V + S K + + QLH C+P S + R+
Sbjct: 243 ASRPAQRFTFQTPCVVRLDLQTSTTKKRPDGSY----PTMIQLHFCVPVSPTRFRVNTIF 298
Query: 299 SLDFASVLKH---VPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 355
+FA+ P +L R +A++++++D+ L+ GQ + N A WN V DK+
Sbjct: 299 FRNFATKFTASGGFPLGSHLNRWYADKIMDQDVELLTGQMVNLLNAAKPWNTVVRADKIA 358
Query: 356 VRYRLWRDALE 366
RYR WRD E
Sbjct: 359 ARYRRWRDQAE 369
>gi|17232499|ref|NP_489047.1| hypothetical protein alr5007 [Nostoc sp. PCC 7120]
gi|17134145|dbj|BAB76706.1| alr5007 [Nostoc sp. PCC 7120]
Length = 450
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 176/366 (48%), Gaps = 44/366 (12%)
Query: 36 KGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP 95
+G++ + N S ++ W+P+ F D + F ++EP+V+FR +DG
Sbjct: 7 QGEIKQAIFNSSMSENNQEFNWRHCWYPITFLQDFPKELPYSFSLYDEPFVLFRNQDGKL 66
Query: 96 GCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSL 150
GC+ + C HRA L G + +G+I+C YHGW++ TDG+C +P +T +N ++S
Sbjct: 67 GCLPDICPHRAAKLSDGQIIDGKIECLYHGWQFGTDGQCLHIPQLPKEATIPKNACVQSF 126
Query: 151 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 205
E++G++W+W G DE IP L P + + + +P + L++N +D
Sbjct: 127 AIVERQGIVWMWAGEADAADETLIPAIPELDKPEF--VTTDFMCNIPYDQNTLIENAIDP 184
Query: 206 AHAPFTHTSTFA-KGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVL 255
AH P +H T + ++P ++ + A +QG Y I++ F P +V+
Sbjct: 185 AHVPISHNGTLGNRAEALPLEMEII--AKSVQGICGRYRNVSSSLSPWININFVAPNLVM 242
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQY 314
I I++ E R A + +P + + R+L+R +F+ LK P ++
Sbjct: 243 LYIPINE----ERGWYRGAAAY------SIPLGKNQCRVLFRAFQNFSQWRLKLTP--RW 290
Query: 315 LWRHFAEQVLNEDLRLVLGQQ---ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAK 370
L + ++VL +D++ GQQ ER+ LP+ D V YR W L+K
Sbjct: 291 LEHWYRQKVLQQDMQQAAGQQKHIERLIKSPRELYLPLKTSDLFPVEYRKW---LDKYGS 347
Query: 371 QLPFMK 376
LPF +
Sbjct: 348 SLPFYQ 353
>gi|290978282|ref|XP_002671865.1| predicted protein [Naegleria gruberi]
gi|284085437|gb|EFC39121.1| predicted protein [Naegleria gruberi]
Length = 563
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 165/387 (42%), Gaps = 68/387 (17%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
N + FW+PVA STD+K + PF EP V++R DG C + C HR+ L
Sbjct: 170 NMDMSLFWYPVALSTDIKINDKKPFVVKLLGEPLVLYRTSDGQVTCTLDLCPHRSAKLST 229
Query: 112 GSVNE--GR--IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQE-----GMIW 160
G + E G+ ++C YHGW + DG+C ++PS +K K++ C ++ GMIW
Sbjct: 230 GEITEFEGKRSLECAYHGWRFEKDGQCVRIPSVSSERMKGLCKTIKCQSKQVHECCGMIW 289
Query: 161 IWPGDEPPTAT--IPCLLPPSGF--------EIHAEIVMELPIEHGLLLDNLLDLAHAPF 210
+WP D+ + IP L + I E ++P + L+L+NLLD AH F
Sbjct: 290 VWPNDKVKSDINQIPIELFREEYLTEDSTKPYIMLEKSRDIPCNYSLVLENLLDFAHLDF 349
Query: 211 THTSTFAKGWSVPSLVKFL-----TPASG------------------------------- 234
TH T K + L TPA
Sbjct: 350 THDGTLGKRSRATQVKTQLILSKDTPAQDDSVRSKLPTEMHFDKTIHSDSFTYRVTKPEY 409
Query: 235 --LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 292
++G + F PPC V + +EG + + + Q+ +P+ + +
Sbjct: 410 QKVKGVKREFGNITSFIPPCFV----RLDNTDYIEGGDLKNAGPRISQIFCMIPTGQNEH 465
Query: 293 RLLYRM--SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN-NGANVWNLPV 349
R+++R ++ + L +P++ A+ +L++DL L+ G E + NGA V++ V
Sbjct: 466 RIIFRFYSTIPVLNYLNKIPYIYSKLLQSADTILDQDLELLFGISENVTKNGAKVFSKIV 525
Query: 350 GYDKLGVRYRLWRDALEKGAKQLPFMK 376
D YR W + K K + K
Sbjct: 526 NADAPIKAYRDWEAKMLKQNKNGIYFK 552
>gi|427730555|ref|YP_007076792.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427366474|gb|AFY49195.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 453
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 39/342 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+P+ F DL + F + + V+FR DG GC+ + C HRA L G + +G
Sbjct: 29 KNCWYPITFLQDLPKNRPYSFSLYNQSLVLFRTPDGKLGCLTDICPHRAAKLSDGQIIDG 88
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
RI+C YHGW++ TDGKC +P +N +KS E +G++WIW G+
Sbjct: 89 RIECLYHGWQFGTDGKCLHIPQLAHDAKIPQNTCVKSYVVVEHQGIVWIWAGEAAAVDEK 148
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT-HTSTFAKGWSVPSLV 226
IP LL P F + + V E+P + ++N LD AH P H S + + P +
Sbjct: 149 RIPNLLEFDDPKFFSL--DYVFEVPYDETYFIENALDPAHVPINHHGSEMNRQDAQPLEI 206
Query: 227 KFL-TPASGLQGYW------DPYPIDMEFRPP-CMVLSTIGISKPGKLEGQNTRQCATHL 278
+ L T +G++G + D + ++F P +V + KPG G A +L
Sbjct: 207 EVLATSITGIKGRYRDTRTPDAKWVKLDFLAPNSVVYGFYDLPKPGFHSG-----LALYL 261
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 338
LP + + R+L R +F++ K+ ++L F +V+ ED ++ G QE++
Sbjct: 262 ------LPKNPTQCRVLARFFQNFSTRRKNQLEPRWLSHLFRNRVVEEDRYMIKGVQEQV 315
Query: 339 NNGANVWN---LPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 376
LP+ D L + YR W L+K LP+ +
Sbjct: 316 ERSGQSLKELYLPLKTSDMLVIEYRKW---LDKYGASLPYYQ 354
>gi|238767614|dbj|BAH66646.1| chlorophyllide a oxygenase [Pseudoscourfieldia marina]
Length = 135
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 251 PCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 309
PC V+STIG++ PG++ G C HL Q+H C+P+S KTRLLY M LDF +K++
Sbjct: 3 PCFVISTIGLAAPGEIRRGVKAEDCDKHLRQVHACVPASEGKTRLLYLMHLDFWPWMKNL 62
Query: 310 PFMQYLWRHFAEQVLNEDLRLVLGQQERM-NNGANVWNLPVGYDKLGVRYRLWRDAL 365
P M+ LW A QVL EDLRLVLGQQERM + +VW PV YDK+GVRYR WR+ L
Sbjct: 63 PLMEELWLSQANQVLGEDLRLVLGQQERMLKSQGDVWGAPVAYDKVGVRYRRWRNQL 119
>gi|357137389|ref|XP_003570283.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 539
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 30/298 (10%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
K W+P+ S ++ DD +P F+ V++R DG+ C ++ C HR L G + +G
Sbjct: 86 KEEWYPLYLSKEVPDDAALPLTVFDRQLVLYRDADGVLRCHEDRCPHRLAKLSEGQLVDG 145
Query: 118 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 170
+++C YHGW++ +GKC K+P + RN ++ + +G++W+W P + P ++
Sbjct: 146 KLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARNYEVRDSQGVVWVWMSPSNPPDSS 205
Query: 171 TIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 226
+P P +GF V ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 206 KLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLA 264
Query: 227 KFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQCATHL 278
+T + G GYW P+ + F PC++ +T+ + K GK QC
Sbjct: 265 FEVTERTRRGFAGYWARERAPHLRSLLRFEAPCVLTNTLEFVDKDGK------EQC---F 315
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
+C P+ + K LL R +S L V Q+ + A +V +D+ + Q E
Sbjct: 316 SAQFLCRPAGQGKAMLLVRFGSTASSPLMKV-LPQWYFHQNACKVFEQDMGFLSSQNE 372
>gi|425455977|ref|ZP_18835688.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
gi|389803035|emb|CCI17994.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR ++G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++LP E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDLPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSMPNPHWYAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|332712318|ref|ZP_08432246.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332349124|gb|EGJ28736.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 452
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 46/342 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PV F DL D F ++EP V+FR +DG C+ N C HRA L G + +G+I+
Sbjct: 32 WYPVTFVQDLPTDRPYSFSLYDEPLVLFRNQDGKLACLTNRCPHRAAKLSEGQIIDGKIE 91
Query: 121 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPC------FEQEGMIWIWPG-----DEPP 168
C YHGW++ DG+C +P QL + KI + C E++G++W+W G D+
Sbjct: 92 CLYHGWQFGRDGQCLHIP--QLPEDAKIPAKACVQSFTVVERQGIVWVWMGKPEAADQEG 149
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 227
T+ L P+ ++ +++LP + ++N LD +H +H T ++ ++ P ++
Sbjct: 150 IPTVADLDNPT--VASSDYMIDLPYDQTYFIENALDPSHLYISHEGTLSSRKYAQPLEME 207
Query: 228 FLTPAS-GLQGYW-------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
L ++ G++G + P+ ++++F P +V S G+ ++ R L+
Sbjct: 208 VLESSTFGIRGRYRKTRQKNSPW-VNLDFVAPNLVTYR---SSSGE---KSVRIGGAALY 260
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ--- 335
LP + K R++ R + ++ LK P W + ++ L EDL LV+GQQ
Sbjct: 261 ----SLPLGKGKCRIIIRNYNNHSTWKLKLQPRWMEHW--YRDKFLEEDLPLVVGQQAEV 314
Query: 336 ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 376
ER+ N L + D L + YR W L+K LPF +
Sbjct: 315 ERLGTSLNSLYLQLKTSDMLLIEYRKW---LDKFGTSLPFYQ 353
>gi|186682267|ref|YP_001865463.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464719|gb|ACC80520.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 451
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 166/353 (47%), Gaps = 50/353 (14%)
Query: 51 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 110
Q +N R W+PV F DL + F +EEP+V+F+ ++G C+ + C+HRA L
Sbjct: 24 QEFNWRQS--WYPVCFLQDLPTNRPYTFSLYEEPFVLFKDQNGQLICLTDRCSHRAARLS 81
Query: 111 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGD 165
G + +G+I+C YHGW++ +G+C +P N + S E++G+IW+W G
Sbjct: 82 DGQIIDGKIECSYHGWQFGNNGQCLHIPQLASDAKIPVNACVPSFKVLERQGIIWMWAG- 140
Query: 166 EPPTA------TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
E TA ++P P F + + V +LP + ++N++D AH P +H
Sbjct: 141 EAETAIDELIPSLPDWNKPECFNL--DYVRDLPYDQSYFIENIIDPAHVPISHDGIIGSR 198
Query: 220 WSVPSLVKFLTPAS--GLQGYWD-------PYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
+L + ++ G++G W P+ I ++F P ++L + GK G
Sbjct: 199 EDAQALDIEVIESNIQGIKGRWQRTRTPNLPW-ISLDFIAPNLILYKFANVQQGKFWG-- 255
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYR-MSLDFASVLKHVP--FMQYLWRHFAEQVLNED 327
T L+ +P + + R+L R S F K +P L R+ ++L D
Sbjct: 256 -----TALYS----IPLGKNRCRILIRNYSNSFPQKTKLMPPWLDHILIRN---KILEGD 303
Query: 328 LRLVLGQQ---ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 376
L+LV+ Q+ ER+ LP+ D L V YR W L+K LPF +
Sbjct: 304 LQLVVEQKAQIERLKKNLKEVYLPLKTSDTLVVEYRKW---LDKFGSSLPFYQ 353
>gi|254413280|ref|ZP_05027051.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179900|gb|EDX74893.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 449
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 164/342 (47%), Gaps = 42/342 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+P+ F D D F ++EP+VIF+ ++ + C+ + C HRA L G + +G
Sbjct: 29 RNCWYPICFRQDFAKDRPYGFSLYDEPFVIFKHQEELI-CLTDRCPHRAAKLSDGQLIDG 87
Query: 118 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 167
+++C YHGW++ +G+C +P T N ++S E++G+IWIWPG DE
Sbjct: 88 KLECLYHGWQFGHEGQCLHIPQLSADGTIPVNANVRSHKVVERQGLIWIWPGAAELADEQ 147
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSLV 226
TIP L P GF +H++ + E+P + +L+++LD AH TH + + P +
Sbjct: 148 AIPTIPQLDQP-GF-VHSDKLTEVPCDISYVLEHMLDPAHIHITHHGNQGDRAKAQPLEM 205
Query: 227 KFL-TPASGLQGYW------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
+ L + +G +G + I +F P + I GQ A +L
Sbjct: 206 EILESSVNGFRGQSRNTREPNSTWIKFDFIAPSLAHFYFSIPDKDWFFGQ-----AFYL- 259
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-QVLNEDLRLVLGQQ--- 335
P S+ K R+L R +F V + V M W H + ++L +D+ ++LGQQ
Sbjct: 260 -----FPLSKGKCRILSRTYRNF--VTQPVKLMPRWWTHLKQNKILAQDISILLGQQHEV 312
Query: 336 ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMK 376
ER+ P+ D + YR W L++ LP+ +
Sbjct: 313 ERLGEPVKQVYSPIPTCDTFAMEYRKW---LDRVGASLPYYR 351
>gi|73539609|ref|YP_299976.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|159464211|ref|XP_001690335.1| hypothetical protein CHLREDRAFT_114479 [Chlamydomonas reinhardtii]
gi|72122946|gb|AAZ65132.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|158279835|gb|EDP05594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 349
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 41/336 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ V +STD D +VPF +EP I+R DG +++ C HR PL +G
Sbjct: 3 LRNCWYMVGWSTDFTADAIVPFTVMDEPLAIYRKTDGSLAALEDRCCHRLAPLSVGRKEG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPG--DEPPTATI 172
++C YHG +++ DG+C ++P + V +++ P E+ G W+W G ++ A +
Sbjct: 63 DELRCMYHGLKFAADGRCTEVPGQDRISPRVCVRAYPIVEKHGAAWVWMGEAEKADEALV 122
Query: 173 PCLLPPSGFEIHAEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P ++ P E + ++ + L+ DNLLDL+HAPF H +TF G S P +K +
Sbjct: 123 PPIIGPDNAEWAMQCSTFDMDVNAELISDNLLDLSHAPFVHEATF--GASDPVALKMMKE 180
Query: 232 ASGLQG---------------------YWDPYPIDME----FRPPCMVLSTIGISKPGKL 266
+ +G Y+ P D F P + + TI +PG L
Sbjct: 181 SETKRGVTQLERGVLADRWQLGRQSNPYFGARPCDDHVVSLFLVPGVFILTITSYEPGVL 240
Query: 267 E----GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
E G T + P S+ K+R + +F Q+ + A+
Sbjct: 241 ERSEGGDVTETPIFKRCTCQMITPISKNKSRFFF----NFGPWAAAADLKQHCF-GIADA 295
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
ED R++ QQ+ ++ + + D+ VRY
Sbjct: 296 AFQEDKRIIEAQQDMIHRSPGRKFVLLPMDQPVVRY 331
>gi|290975135|ref|XP_002670299.1| predicted protein [Naegleria gruberi]
gi|284083856|gb|EFC37555.1| predicted protein [Naegleria gruberi]
Length = 443
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 161/401 (40%), Gaps = 71/401 (17%)
Query: 38 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTD--LKDDTMVPFDCFEEPWVIFRGKDGIP 95
K P + V N + FW+PVA S D + D F EP ++R DG
Sbjct: 41 KFPNDTFKTKSDVT--NLEMTLFWYPVALSKDVSITDSKPKTIKLFGEPLALYRTSDGNI 98
Query: 96 GCVQNTCAHRACPLHLGSVNEGR----IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKS 149
CV++ C HR+ L G V E ++C YHGW + +G+C ++PS +K +
Sbjct: 99 TCVKDLCPHRSAKLSTGQVTEFEGKRSLECAYHGWRFEKEGQCVRIPSVSSERMKGLCST 158
Query: 150 LPCFEQE-----GMIWIWPGDE--PPTATIPCLL--------PPSGFEIHAEIVMELPIE 194
+ C ++ G+IW++P D+ IP L S E+ E +LP
Sbjct: 159 IKCQAKQVHECCGLIWVFPNDKVKADINQIPLELFREEFLTDDSSKLEVLIENTRDLPCH 218
Query: 195 HGLLLDNLLDLAHAPFTHTSTFAK-------------GWSVPS----------------- 224
+ +L+NLLD AH FTH T K +PS
Sbjct: 219 YSFVLENLLDPAHLDFTHDGTIGKRSQATQIQSQLVISKDIPSDNPSRRLIPKEMQYDQS 278
Query: 225 ------LVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+F P + G + + + F PPC V + + +
Sbjct: 279 IHQDSFTYRFTKPEFKKIPGLKSEFMVQLSFIPPCFV-------RMDTTDYIANERSGPR 331
Query: 278 LHQLHVCLPSSRKKTRLLYRM--SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ 335
+ Q+ +P+ + +++++ SL + L +PF++ + + + ++DL L+ G
Sbjct: 332 MSQVFCLIPTGEGEVKVIFKFYSSLSILNFLNKIPFIRNKFAKTVDMIFDQDLELLAGVY 391
Query: 336 ERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 376
E +NNG V++ V D YR W + K+ F K
Sbjct: 392 ENVNNGVKVFSKIVNADAPIKGYREWEAKMLNVNKKGIFFK 432
>gi|425447801|ref|ZP_18827783.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
gi|389731630|emb|CCI04395.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
Length = 446
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR ++G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++LP E G LL+NL D AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDLPYEQGYLLENLFDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSGNPQESWKYLDFIAPNLVHYRFSMPNPHWYAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425460637|ref|ZP_18840118.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
gi|389826681|emb|CCI22681.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
Length = 446
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425441278|ref|ZP_18821558.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
gi|389718043|emb|CCH97943.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
Length = 446
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFALPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425464229|ref|ZP_18843551.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
gi|389833823|emb|CCI21361.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
Length = 446
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 157/345 (45%), Gaps = 46/345 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMK 376
E+ + LP+ D L + R W D + LP+ +
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD---RYGDSLPYYQ 343
>gi|166363589|ref|YP_001655862.1| dioxygenase Rieske iron-sulfur component [Microcystis aeruginosa
NIES-843]
gi|166085962|dbj|BAG00670.1| probable dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa NIES-843]
Length = 446
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNP-YSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVMERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|422305128|ref|ZP_16392465.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
gi|389789620|emb|CCI14428.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + V++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW----DPYPI--DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W +P ++F P +V + P G L
Sbjct: 198 QILEVSARGIRSQWRNSCNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|440753320|ref|ZP_20932523.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|440177813|gb|ELP57086.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
Length = 446
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + +++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425470320|ref|ZP_18849190.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
gi|389884067|emb|CCI35571.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
Length = 446
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNP-YSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVMERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + ++ + V++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVYTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425437604|ref|ZP_18818019.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
gi|389677378|emb|CCH93660.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
Length = 446
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + +++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425448723|ref|ZP_18828567.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
gi|389764003|emb|CCI09609.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 171 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVKF 228
IP + +H + +++ P E G LL+NLLD AH +H S F + F
Sbjct: 138 DIPIIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAF 197
Query: 229 L---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
A G++ W P + ++F P +V + P G L
Sbjct: 198 QILEISARGIRSQWRNSHNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------LA 248
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQQ 335
+ L R +RLL R +FA V QY WR H + ++L +DL L+ QQ
Sbjct: 249 LYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQQ 301
Query: 336 ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 363
E+ + LP+ D L + R W D
Sbjct: 302 QMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|145353812|ref|XP_001421195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581432|gb|ABO99488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 492
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 45/324 (13%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
VS + + W+P A+ D++ D + F EP V +R K G CV + C HR
Sbjct: 21 VSAEARAEAYDWRAHWYPAAYVADVEKDAPLTFTLLGEPLVFWRDKSGEMRCVADRCPHR 80
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVK--IKSLPCFE 154
PL G VNE G ++C YHGW ++ +GKC +P T L++ + + + P E
Sbjct: 81 LVPLSEGRVNETGELECGYHGWTFTGEGKCTSIPQIEQGTGLETALKSPRSCVAAYPTKE 140
Query: 155 QEGMIWIWPG--DEPPTATIPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHA 208
+GM+W++P D+ P AT+P L L P + + +I +LP++ LL+N++D++H
Sbjct: 141 AQGMLWVYPTSMDKAP-ATLPDLPLIPEYDDPECVCQDIFRDLPMDWATLLENVMDVSHV 199
Query: 209 PFTHTSTFAKGWSVPSLVKFLTPASGL-----QGYWDPYPID-------MEFRPPCMVLS 256
PFTH ++ K + + L A+G+ +G W P EF+ P ++
Sbjct: 200 PFTHHNSVGKRENATPVNLELASAAGVTANGFEGIWKEGPRKGKYGSQYTEFKAPTLMRH 259
Query: 257 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY-- 314
T+ K E T +P++ + RL+ R F S L F Y
Sbjct: 260 TL------KTEAFTTLTVV-------YAVPTTPGRCRLMARFPFIFKSALPRFFFGLYPQ 306
Query: 315 LWRHFAEQVLNEDLRLVLGQQERM 338
+ H + + ED ++ L +QER+
Sbjct: 307 WFSHTNQNAILEDDQIFLHKQERL 330
>gi|428311820|ref|YP_007122797.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253432|gb|AFZ19391.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 447
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 166/360 (46%), Gaps = 43/360 (11%)
Query: 40 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
P +L ++ + +N R W+PV F DL ++ F ++EP+V+FR +D C+
Sbjct: 13 PTATLPLAEQEEEFNWR--QCWYPVTFVQDLPENRPYSFSLYDEPFVLFRNQDKKLICLT 70
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC---EKMPSTQLRNVK--IKSLPCFE 154
+ C HRA L G + +G+I+C YHGW++ ++G+C ++P+ +K ++S E
Sbjct: 71 DRCPHRAAKLSDGQILDGKIECLYHGWQFGSEGQCLHIPQLPTDAKIPIKACVQSFKVIE 130
Query: 155 QEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 209
++GMIW+W G DE TIP L P GF ++++ + EL + +++++LD AH
Sbjct: 131 RQGMIWMWAGNAEAADEDRIPTIPKLGKP-GF-VYSDKITELSCDISYVIEHMLDPAHIH 188
Query: 210 FTHTSTFAKGWSVPSLVKFLTPAS--GLQGYW------DPYPIDMEFRPPCMVLSTIGIS 261
H L + +S G +G + D +++F P + I
Sbjct: 189 IAHHGNQGNREKAQPLEMEIIESSVEGFRGRFRETRLPDQTWRNLDFIVPSLAHLHFPIP 248
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
+ G GQ P + + R+L R +F ++ V M W H +
Sbjct: 249 EKGWFFGQA-----------FYFFPLGKGRCRILTRSYRNFVTL--PVKLMPRWWIHLKQ 295
Query: 322 -QVLNEDLRLVLGQQ---ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 376
++L EDL +LGQQ ER+ P+ D + YR W D + LPF +
Sbjct: 296 NKILEEDLAQLLGQQQEVERLGQTIKQVYAPIETCDTFAIAYRQWVD---RYGSSLPFYR 352
>gi|242063354|ref|XP_002452966.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
gi|241932797|gb|EES05942.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
Length = 538
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 40/303 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
K W+P+ S ++ DD +P F+ V++R +G+ C ++ C HR L G + +G
Sbjct: 85 KEEWYPLYLSKEVPDDAALPLTVFDRQLVLWRDGNGVLRCHEDRCPHRLAKLSEGQIVDG 144
Query: 118 RIQCPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 166
+++C YHGW++ +GKC K+P S RN +++ + +G++W+W D
Sbjct: 145 KLECLYHGWQFDGEGKCVKIPQLPEGAKIPRSACARNYEVR-----DSQGVVWVWVSDAN 199
Query: 167 -PPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWS 221
P +P P +GF V ELP +H +LL+NL+D AH P +H T AK
Sbjct: 200 PPDEGKLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKRED 258
Query: 222 VPSLVKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
L +T + G GYW P+ + + F PC++ +T+ + + T QC
Sbjct: 259 AQPLFFDVTERTPRGFAGYWGRTSTPHLRNLLRFEAPCVLTNTLEYT-----DKDGTEQC 313
Query: 275 -ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
+ H +C P+ + K+ LL R S L V + + A +V +D+ +
Sbjct: 314 FSAHF----LCRPAGQGKSMLLVRFGSTLRSPLAKV-LPTWYFHQNACKVFEQDMGFLSS 368
Query: 334 QQE 336
Q E
Sbjct: 369 QNE 371
>gi|440790926|gb|ELR12186.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 306
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 22/182 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVP---------FDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 107
++N W+PVAF+++L F +P V+FR + G CVQ+ C+HR+
Sbjct: 10 MRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHRSA 69
Query: 108 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVK---IKSLPCFEQEGMIWIWP 163
PL +G+V +GR++C YHGW++ + GKCE +PS R K + + P E ++W+WP
Sbjct: 70 PLSVGTVRDGRLECKYHGWQFGSGGKCESIPSEPTTRPGKPFCVYAYPTTEVYDLVWVWP 129
Query: 164 GDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
GD P +P F+ + + + + I HGL ++N+LD +H PFTH T
Sbjct: 130 GD--PEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIGHGLFIENILDPSHLPFTHDGTL 187
Query: 217 AK 218
+K
Sbjct: 188 SK 189
>gi|125541435|gb|EAY87830.1| hypothetical protein OsI_09250 [Oryza sativa Indica Group]
Length = 539
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 40/334 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ DD +P F+ V++R G+ C ++ C HR L G + +G+++
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGKLE 148
Query: 121 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW-PGDEPPTA-TIP 173
C YHGW++ +GKC K+P + RN +S + +G++W W G PP +P
Sbjct: 149 CLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
Query: 174 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 229
P + GF V ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 WFEPYARPGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLFFEV 267
Query: 230 TPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQC-ATHLHQ 280
T + G GYW P+ + + F PC++ +T+ + K GK QC + H
Sbjct: 268 TERTPGGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVDKDGK------EQCFSAHF-- 319
Query: 281 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ----- 334
+C P+ + K+ LL R S + ++K +P ++ + A +V +D+ + Q
Sbjct: 320 --LCRPAGQGKSMLLVRFGSTQTSPLVKVLP--RWYFHQNACKVFEQDMGFLSSQNEVLL 375
Query: 335 QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
+E+M NL D YR W D G
Sbjct: 376 REKMPTKELYLNLRSS-DTWVAEYRRWMDRAGHG 408
>gi|293333760|ref|NP_001168313.1| hypothetical protein [Zea mays]
gi|223947409|gb|ACN27788.1| unknown [Zea mays]
gi|413939284|gb|AFW73835.1| hypothetical protein ZEAMMB73_526484 [Zea mays]
Length = 538
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 40/300 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ DD +P F+ V++R G+ C ++ C HR L G + +G+++
Sbjct: 88 WYPLYLAKEVPDDAALPLTVFDRQLVLWRDAHGVLRCHEDRCPHRLAKLSEGQIVDGKLE 147
Query: 121 CPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDE--PP 168
C YHGW++ DGKC K+P S RN +++ + +G++W+W D P
Sbjct: 148 CLYHGWQFDGDGKCVKIPQLPEGAKIPRSACARNYEVR-----DSQGVVWVWMSDANPPD 202
Query: 169 TATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPS 224
+P P +GF V ELP +H +LL+NL+D AH P +H T AK
Sbjct: 203 EGKLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 225 LVKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQC-AT 276
L +T + G GYW P+ + + F PC++ +T+ + + QC +
Sbjct: 262 LFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFA-----DKDGREQCFSA 316
Query: 277 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
H +C P+ + K+ LL R S L V + + A +V +D+ + Q E
Sbjct: 317 HF----LCRPAGQGKSMLLVRFGSTLRSPLAKV-LPSWYFHQNACKVFEQDMGFLSSQNE 371
>gi|427724861|ref|YP_007072138.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427356581|gb|AFY39304.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 451
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 55/337 (16%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNEGRI 119
W+PV F DL F E+P VI+ ++ V + C HR PL G + +G +
Sbjct: 23 WYPVHFVQDLSKTEPTRFVLLEKPLVIWWHEESQQWNVFSDVCPHRLAPLSEGRIVDGCL 82
Query: 120 QCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 167
+CPYHGW++S G CEK+P + + + S PC ++G+++++PG +
Sbjct: 83 ECPYHGWQFSESGSCEKIPFQKEDGTANENSRATVASYPCRVEQGLLFVYPGKLENAETQ 142
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P TIP L G + A++ ++P + LL+N+LD +H FTH + +
Sbjct: 143 PLPTIPALDQYPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPRVGNRKNAKEFIL 202
Query: 228 FLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA---------- 275
++ +G G W+ P + GKL Q T A
Sbjct: 203 DVSDIEKTGFTGIWEEGP------------------RRGKLGAQKTTFFAPSAMWHDIEE 244
Query: 276 THLHQLHVC---LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAEQVLNEDLR 329
+ Q+ C +P+ + K R L R+ F S + + F +Y R H ++ + ED +
Sbjct: 245 SSFGQVMTCVYAVPTEKGKCRALVRLPFRFKSAIPRLVF-KYTPRWFSHVSQMGILEDDQ 303
Query: 330 LVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 361
+ L QER N A LP G D + YR W
Sbjct: 304 IFLHLQERELEKSKKNYAQTCYLPTGSDLFVLAYRKW 340
>gi|115449167|ref|NP_001048363.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|47497136|dbj|BAD19185.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|47497583|dbj|BAD19653.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|113537894|dbj|BAF10277.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|125583977|gb|EAZ24908.1| hypothetical protein OsJ_08688 [Oryza sativa Japonica Group]
gi|215740658|dbj|BAG97314.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767906|dbj|BAH00135.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ DD +P F+ V++R G+ C ++ C HR L G + +G+++
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGKLE 148
Query: 121 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW-PGDEPPTA-TIP 173
C YHGW++ +GKC K+P + RN +S + +G++W W G PP +P
Sbjct: 149 CLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
Query: 174 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 229
P + GF V ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 WFEPYARPGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLFFEV 267
Query: 230 TPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQC-ATHLHQ 280
T + G GYW P+ + + F PC++ +T+ + K GK QC + H
Sbjct: 268 TERTPRGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVDKDGK------EQCFSAHF-- 319
Query: 281 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
+C P+ + K+ LL R S + ++K +P ++ + A +V +D+ + Q E
Sbjct: 320 --LCRPAGQGKSMLLVRFGSTQTSPLVKVLP--RWYFHQNACKVFEQDMGFLSSQNE 372
>gi|91781025|ref|YP_556232.1| vanillate demethylase [Burkholderia xenovorans LB400]
gi|91693685|gb|ABE36882.1| Vanillate demethylase [Burkholderia xenovorans LB400]
Length = 353
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 35/262 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ +S DL M+ E V+FR DG + + C HR PLHLG + +
Sbjct: 4 LRNTWYAAGWSQDLAAGAMLGRTMLNEQLVLFRADDGTVSALSDICPHRFAPLHLGKIVD 63
Query: 117 G-RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT--A 170
G RIQC YH E+ G C K P + + K+++ P E+ +IW+W G++ +
Sbjct: 64 GCRIQCAYHALEFDGTGACVKNPHGKQKIPAAAKLQAYPVVEKHSLIWVWMGEQAAADPS 123
Query: 171 TIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS--- 224
IP L P SGF++ + + + L++DNL+DL+H F H +++ +
Sbjct: 124 VIPDFSMLDPDSGFQVSRRDWLHMDASYDLVVDNLMDLSHTAFLHDGILGSKYTIKADTS 183
Query: 225 --------LVKFLTPASGLQGYWD----------PYPIDMEFRPPCMVLSTIGISKPGKL 266
V L P + G++D Y ++ + P +++ G++ PG
Sbjct: 184 LEQTGETVKVTRLMPNVPVPGFFDLMFNRDGGIVDYWTEIRWNLPGCLMNNTGVTLPGA- 242
Query: 267 EGQNTRQCATHLHQLHVCLPSS 288
R T ++ +H P +
Sbjct: 243 ----PRSEGTGVYGMHFLTPET 260
>gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis]
Length = 552
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 44/336 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + D+ DD + F++ V+++ +G C ++ C HR L G + +GR++
Sbjct: 102 WYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGELRCYEDRCPHRLAKLSEGQLIDGRLE 161
Query: 121 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIWIWPGDEPPTATIP 173
C YHGW++ +GKC K+P QL N KI C E +G++W+W + P P
Sbjct: 162 CLYHGWQFEGEGKCVKIP--QLPTNAKIPQSACVKTYEIRESQGVVWVWMSRKTP----P 215
Query: 174 CLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPS 224
L FE A ELP +H +LL+NL+D AH P +H T AK +
Sbjct: 216 NLNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAHIPISHDRTDWSAKREDAQA 275
Query: 225 LVKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
L +T + G G+W DP ++ + F PC++ + I ++ T
Sbjct: 276 LRFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNRDIVDENGVKHYFT------ 329
Query: 278 LHQLHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
L +C P+ + K L+ R + + K +P Q+ + A +V +D+ + Q E
Sbjct: 330 --GLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIP--QWYFHQNASKVFEQDMGFLSSQNE 385
Query: 337 -RMNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 368
M NL + D YR W D + G
Sbjct: 386 VLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHG 421
>gi|307546530|ref|YP_003899009.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
gi|307218554|emb|CBV43824.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
Length = 383
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 61/345 (17%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L+D + C EP V FRG +G V++ C HR PL LG V +G
Sbjct: 37 KNTWYVACTPDELEDKPLGRTIC-NEPIVFFRGDEGRVAAVEDFCPHRGAPLSLGFVRDG 95
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E +GKC MP ++R I++ P E+ G +WIWPGD P P L+
Sbjct: 96 KLVCGYHGLEMGCNGKCSSMPGQRVRGFPSIRAYPVEERHGFVWIWPGD--PDKADPALI 153
Query: 177 PPSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P E+H + + ++ L++DNL+DL H + H S+ + ++
Sbjct: 154 P----ELHWANDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----PEIE 204
Query: 228 FLTPASGLQG----------------YW----------DPYPIDM----EFRPPCMVLST 257
P + ++G +W D P+D F PP VL
Sbjct: 205 EAAPETKVEGDEVTTGRHMHDIPAPPFWQTALRGNGLADDVPVDRWQICRFTPPSHVLIE 264
Query: 258 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 317
+G++ G + P + + M+ +F P Q L
Sbjct: 265 VGVAHAGHGGYDAPANLKASSIVVDFITPETDTSIWYFWGMARNFK------PEDQELTD 318
Query: 318 HFAE---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
E Q+ +EDL ++ QQ + + L + D GV+ R
Sbjct: 319 QIREGQGQIFSEDLEMLESQQRNLLRYPDRQLLKLNIDGGGVQAR 363
>gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
Length = 552
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 151/335 (45%), Gaps = 36/335 (10%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
K W+P+ + ++ DD + F++ V+F+ + C ++ C HR L G + +G
Sbjct: 99 KEEWYPLYLTKNVPDDAPLGLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDG 158
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIW--PGDEPPTA 170
R++C YHGW++ +GKC K+P R+ +K+ + +G+IW+W P P +
Sbjct: 159 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKVPPNVS 218
Query: 171 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 226
IP GF+ ELP +H +LL+NL+D AH P +H T AK L+
Sbjct: 219 KIPWFENFARPGFQ-DVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLL 277
Query: 227 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHL 278
+T + G G+W P + F PC++ + I K G++ +
Sbjct: 278 FEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEI---------NYF 328
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ---- 334
L +C P+ + K+ L+ R S + + F Q+ + A +V +D+ + Q
Sbjct: 329 SGLFLCRPTGQGKSMLIVRFGGTKRSPIVKL-FPQWYFHQNASKVFEQDMGFLSSQNEIL 387
Query: 335 -QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
+E++ NL D YR W D + G
Sbjct: 388 LKEKVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 421
>gi|257059415|ref|YP_003137303.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589581|gb|ACV00468.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 450
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 46/357 (12%)
Query: 45 NVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 104
+VS P KN W+P+ F D F ++EP+V+F K G C+Q+ C H
Sbjct: 16 SVSPPQSDCQLDWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNKQGKLVCLQDICPH 75
Query: 105 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEG 157
RA L G + +G ++C YHGW+++ +GKC +P QL +N I S +++G
Sbjct: 76 RAAKLSDGQILDGNLECLYHGWQFNDEGKCVHIP--QLPDDTPIPKNACITSFFVVQKQG 133
Query: 158 MIWIWPG--DEPPTATIPCLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
+IW W G +E IP + ++ + +++LP + L++N++D AH +H
Sbjct: 134 IIWFWRGKKEEADETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHG 193
Query: 215 TFAKGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVLSTIGISKPGK 265
+ + L + S ++G Y I ++F P +V+ + P +
Sbjct: 194 SLGNRKNAQPLTMEVKEKS-IEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTL--PNQ 250
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW-RHF-AEQV 323
L G T L+ LPS + RLL R +++++ ++ W H + ++
Sbjct: 251 LMG------GTALYS----LPSGKGSCRLLLR---NYSNIPNWKARLKPRWLLHLGSNRI 297
Query: 324 LNEDLRLVLGQQERMNNGANVWN---LPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 376
L ED ++ +Q + LP+ D L V YR W D K LPF +
Sbjct: 298 LEEDSVFIMAEQSILEKSKQTMQDLILPLKTSDLLVVEYRKWLDTF---GKALPFYQ 351
>gi|91782291|ref|YP_557497.1| vanillate O-demethylase oxygenase [Burkholderia xenovorans LB400]
gi|91686245|gb|ABE29445.1| Vanillate O-demethylase oxygenase subunit [Burkholderia xenovorans
LB400]
Length = 345
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 149/342 (43%), Gaps = 37/342 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ AFS D+K + EP V+FR G G + + C+HRA PL G V+
Sbjct: 3 LRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+CPYHG E++ G C +P + ++S P E++G+IWIW G EP A +
Sbjct: 63 DIIRCPYHGLEFNAAGVCAHIPGQERIPAAANVRSYPVSERDGLIWIWMG-EPEKADLRS 121
Query: 175 LLPPSGFEIHA----EIVMELPIEHGLLLDNLLDLAHAPFTHTST--------FAKGWSV 222
++ M + LL+DN+LDL H + H +T F SV
Sbjct: 122 IMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVAYIHANTIGGNPQTHFNADMSV 181
Query: 223 -------------PSLV--KFLTPASGLQGYWDPYPIDMEFRP--PCMVLSTIGISKPGK 265
P+ V K A G +G D + + +E+RP ++ G + G
Sbjct: 182 QFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQM-VEYRPCGGNVLRVNAGACEVGT 240
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ R L +H P + T ++ + D A VP M L+ F E +
Sbjct: 241 GAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTD-APRESGVPDM--LFDQFYETIC- 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEK 367
ED R + QQ R+N+ ++ + + D R RL + L +
Sbjct: 297 EDERALEAQQRRINDMPDMRFVGIASDGAVSRARLLLERLHE 338
>gi|297821841|ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
gi|297324642|gb|EFH55062.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 39/334 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ DD + ++ V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNIPDDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 121 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
C YHGW++ +GKC K+P S ++ + +K+ + +G++W+W + P P
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205
Query: 176 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 226
LP P F+I ELP +H +LL+NL+D AH P +H T AK LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263
Query: 227 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
+T S G G W + F PC++ + + EG++ +
Sbjct: 264 FEVTERSNRGFAGTWGREKDGGKGSNLLRFDAPCVLQNN------REFEGKDG--VKNYF 315
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 337
L +C P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374
Query: 338 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 368
M +L + D YR W D + G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>gi|418532828|ref|ZP_13098725.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450154|gb|EHN63209.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 358
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
+S QP T +N W+ A + ++ D + C E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHR 57
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG 164
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPG
Sbjct: 58 GAPLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPG 117
Query: 165 DEPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------- 212
D+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 118 DK--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQA 175
Query: 213 ------------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRP 250
TS F + P K ++GL D P+D F P
Sbjct: 176 EIDETPCKTEVIGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTP 232
Query: 251 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVL 306
P VL +G++ GK + + + P + + M+ F ASV
Sbjct: 233 PSHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVT 292
Query: 307 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 AAIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|299532710|ref|ZP_07046098.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719345|gb|EFI60314.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 358
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
+S QP T +N W+ A + ++ D + C E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHR 57
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG 164
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPG
Sbjct: 58 GAPLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPG 117
Query: 165 DEPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------- 212
D+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 118 DK--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQA 175
Query: 213 ------------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRP 250
TS F + P K ++GL D P+D F P
Sbjct: 176 EIDETPCKTEVMGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTP 232
Query: 251 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVL 306
P VL +G++ GK + + + P + + M+ F ASV
Sbjct: 233 PSHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVT 292
Query: 307 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 AAIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|264680324|ref|YP_003280234.1| vanillate monoxygenase [Comamonas testosteroni CNB-2]
gi|262210840|gb|ACY34938.1| vanillate monoxygenase [Comamonas testosteroni CNB-2]
Length = 358
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
+S QP T +N W+ A + ++ D + C E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHR 57
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG 164
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPG
Sbjct: 58 GAPLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPG 117
Query: 165 DEPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------- 212
D+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 118 DK--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQA 175
Query: 213 ------------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRP 250
TS F + P K ++GL D P+D F P
Sbjct: 176 EIDETPCKTEVLGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTP 232
Query: 251 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVL 306
P VL +G++ GK + + + P + + M+ F ASV
Sbjct: 233 PSHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVT 292
Query: 307 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 AAIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|218246369|ref|YP_002371740.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166847|gb|ACK65584.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 450
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 46/357 (12%)
Query: 45 NVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 104
+VS P KN W+P+ F D F ++EP+V+F G C+Q+ C H
Sbjct: 16 SVSPPQSDCQLDWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNNQGKLVCLQDICPH 75
Query: 105 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEG 157
RA L G + +G ++C YHGW+++ +GKC +P QL +N I S +++G
Sbjct: 76 RAAKLSDGQILDGNLECLYHGWQFNDEGKCVHIP--QLPDDTPIPKNACITSFFVVQKQG 133
Query: 158 MIWIWPG--DEPPTATIPCLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
+IW W G +E IP + ++ + +++LP + L++N++D AH +H
Sbjct: 134 IIWFWRGKKEEADETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHG 193
Query: 215 TFAKGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVLSTIGISKPGK 265
+ + L + S ++G Y I ++F P +V+ + P +
Sbjct: 194 SLGNRKNAQPLTMEVKEKS-IEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTL--PNQ 250
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW-RHF-AEQV 323
L G T L+ LPS + RLL R +++++ ++ W H + ++
Sbjct: 251 LMG------GTALYS----LPSGKGSCRLLLR---NYSNIPNWKARLKPRWLLHLGSNRI 297
Query: 324 LNEDLRLVLGQQERMNNGANVWN---LPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 376
L ED ++ +Q + LP+ D L V YR W D K LPF +
Sbjct: 298 LEEDSVFIMAEQSILEKSRQTMQDLILPLKTSDLLVVEYRKWLDTF---GKALPFYQ 351
>gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ +D + F++ V+F+ +G C ++ C HR L G + +GR++
Sbjct: 82 WYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLE 141
Query: 121 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 173
C YHGW++ +GKC K+P R +K+ + +G+IW+W + P + +P
Sbjct: 142 CLYHGWQFEGEGKCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLP 201
Query: 174 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 229
GF+ + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 202 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEV 260
Query: 230 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 281
T + G G+W P + F PC++ + I K G++ + L
Sbjct: 261 TERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEI---------NYFSGL 311
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
+C P+ + K+ L+ R S L V F ++ + A +V +D+ + Q E
Sbjct: 312 FLCRPTGQGKSMLIVRFGGTKRSPLAKV-FPKWYFHQNASKVFEQDMGFLSSQNE 365
>gi|295700273|ref|YP_003608166.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439486|gb|ADG18655.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 352
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ V +S++ +VPF +EP ++R DG +++ C HR PL +G
Sbjct: 4 LRNCWYMVGWSSEFSATDIVPFTVMDEPLALYRKDDGTLVALEDLCPHRLAPLTVGRKEG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG +++ DG+C ++P + + K ++S P E+ G W+W GD P A +
Sbjct: 64 DELRCMYHGLKFAADGRCTEIPGQERISSKVCVRSYPIEEKHGAAWVWMGD-PAKADVAL 122
Query: 175 LLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
+ P G + + ++ VM E L+ DNLLDL+HAPF H STF V
Sbjct: 123 IPPIEGPDSDTYSMVCSKFVMNGNAE--LVADNLLDLSHAPFIHESTFGANNKV 174
>gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon
at the inner envelope membrane of chloroplasts 55-II;
Flags: Precursor
gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana]
gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
Length = 539
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 39/334 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ +D + ++ V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 121 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
C YHGW++ +GKC K+P S ++ + +K+ + +G++W+W + P P
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205
Query: 176 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 226
LP P F+I ELP +H +LL+NL+D AH P +H T AK LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263
Query: 227 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
+T S G G W + F PC++ + + EG++ +
Sbjct: 264 FEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNN------REFEGKDG--VKNYF 315
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 337
L +C P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374
Query: 338 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 368
M +L + D YR W D + G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>gi|255597961|ref|XP_002536894.1| oxidoreductase, putative [Ricinus communis]
gi|223518190|gb|EEF25490.1| oxidoreductase, putative [Ricinus communis]
Length = 293
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 40/280 (14%)
Query: 50 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
V P + ++N W+ ++ +L +V EP V++R +DG P + + C+HR PL
Sbjct: 17 VAPEDRFIRNSWYVALWADELPAGKLVHQTILGEPVVLYRKEDGAPAAIVDRCSHRFAPL 76
Query: 110 HLGSVNEG-RIQCPYHGWEYSTDGKCEKMPS---TQLRNVKIKSLPCFEQEGMIWIWPGD 165
+G + G RIQCPYHG E+ GKC K P T ++S P E+ IWIW GD
Sbjct: 77 SMGKLLPGNRIQCPYHGLEFDQTGKCVKNPHGNCTIPAASHLRSFPVIEKYKFIWIWMGD 136
Query: 166 -EPPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
+ A IP CL I + + + L++DNLLDL+H + H +
Sbjct: 137 TQADPAKIPDYSCLDTAPAAHITDTGYLNIKAHYELIVDNLLDLSHTAYVHEGILGNSGT 196
Query: 222 V------------------------PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 257
V P +++ L+P +G D + + P ++L
Sbjct: 197 VVADIGVEQVGDVITVARPSKDTVTPGMLQMLSPGGFERG--DQHQTISWYAPSNLILE- 253
Query: 258 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 297
G+SK G+ + Q T A LH+ P + + + +R
Sbjct: 254 FGVSKVGEPKSQGTGYLA-----LHLITPETARSSHYRFR 288
>gi|221065063|ref|ZP_03541168.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|57116471|gb|AAW33713.1| VanA [Comamonas testosteroni]
gi|220710086|gb|EED65454.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 358
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 141/341 (41%), Gaps = 52/341 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ A + ++ D + C E V +R +G V++ C HR PL LG V EG
Sbjct: 11 RNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHRGAPLSLGRVCEG 69
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E DG+ MP ++R IKS P E+ G +W+WPGD+ A L+
Sbjct: 70 KLVCGYHGLEMGCDGRTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPGDK--DAADAALI 127
Query: 177 PPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------------------- 212
P + E + + ++ L++DNL+DL H + H
Sbjct: 128 PDLQWHDSPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTEVI 187
Query: 213 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 262
TS F + P K ++GL D P+D F PP VL +G++
Sbjct: 188 GDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPPSHVLIEVGVAH 244
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRH 318
GK + + + P + + M+ F ASV + Q+
Sbjct: 245 AGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVTAAIKQGQH---- 300
Query: 319 FAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 301 ---KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|168040321|ref|XP_001772643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676019|gb|EDQ62507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 487
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 145/338 (42%), Gaps = 48/338 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ + F+ V+F G C ++ C HR L G V +G+++
Sbjct: 35 WYPMYLTAEMPKAAPLGLTVFDRELVLFYDDKGELHCFEDRCPHRLAKLSEGKVTDGKLE 94
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFE------QEGMIWIWPGDEPPTATIPC 174
C YHGW++ G+C K+P + KI C + +G++W+W GD P
Sbjct: 95 CLYHGWQFEGSGQCTKIPQL-VPGAKIPKQACAKAYEVKISQGVVWVWLGDR--ATADPS 151
Query: 175 LLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 226
LP GF+ H + ELP ++ +L++NL+D AH P +H T A+ + +LV
Sbjct: 152 KLPWFEHYEREGFQ-HISAIHELPYDYSILVENLMDPAHIPISHDRTDPSARRENAQALV 210
Query: 227 KFLTPAS--GLQGYWD-----PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
+T S G G W + F PC+V + KP + H+
Sbjct: 211 FEVTERSSRGFAGKWKEISSPSFTNATRFEAPCIVRNDKEYVKPDGTDA--------HMS 262
Query: 280 QLHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 338
+ +C P+ + K L+ R S +F LK +P + + V +D+ + Q E +
Sbjct: 263 AVFLCRPAGQGKCMLIARFGSTNFPGSLKMIP--PWYIHITSNTVFEQDMGFLASQNEDL 320
Query: 339 NNGANVWNLPVGYDKLGVR--------YRLWRDALEKG 368
NLP L ++ +R W D + G
Sbjct: 321 VKK----NLPTKDLYLNLKSSDTWVSEFRKWNDLVGHG 354
>gi|399909695|ref|ZP_10778247.1| vanillate monooxygenase [Halomonas sp. KM-1]
Length = 354
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 147/357 (41%), Gaps = 58/357 (16%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C EP V+FRG +G V++ C HR PL LG V +G
Sbjct: 9 KNTWYVACTPDEIADKPLGRTIC-NEPIVLFRGDEGRVAAVEDFCPHRGAPLSLGFVRDG 67
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E DGKC MP ++R I++ P E+ G +W+WPGD P P L+
Sbjct: 68 KLVCGYHGLEMGCDGKCAGMPGQRVRGFPSIRAYPVEERHGFVWLWPGD--PEQADPNLI 125
Query: 177 PPSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P E+H + + E+ L++DNL+DL H + H S+ + ++
Sbjct: 126 P----ELHWANNPDWAYGGGLYHIHCEYRLMIDNLMDLTHETYVHASSIGQ-----PEIE 176
Query: 228 FLTPASGLQG----------------YW----------DPYPIDM----EFRPPCMVLST 257
P + + G +W D P+D F PP VL
Sbjct: 177 EAAPETTVNGDEVITSRHMENIPAPPFWQAALRGCGLADDVPVDRWQICRFTPPSHVLIE 236
Query: 258 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 317
+G++ G G A + V + T + Y + + + + R
Sbjct: 237 VGVAHAGN--GGYDAPAAVKASSIVVDFITPETDTSIWYFWGMARNFKPEDGELTEKI-R 293
Query: 318 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQ 371
++ EDL ++ QQ + L + D GV+ R D A E+ A++
Sbjct: 294 EGQGKIFAEDLDMLEAQQRNLLRYPERQLLKLNIDGGGVQARRIIDRILAEERTARE 350
>gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 34/331 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + D+ +D + F++ V++R G C ++ C HR L G + +GR++
Sbjct: 92 WYPLYLTKDVPEDAPLGLTVFDKQLVLYRDGAGELHCHEDRCPHRLAKLSEGQLIDGRLE 151
Query: 121 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA--TIP 173
C YHGW++ +GKC K+P + R+ +++ + +G++W+W E P+ +IP
Sbjct: 152 CLYHGWQFEGEGKCVKIPQLPSDAKIPRSACLRTYEVRDSQGVVWVWMSLEKPSTLKSIP 211
Query: 174 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKFL 229
GF + I ELP +H +LL+NL+D AH P +H TS AK L +
Sbjct: 212 WFENFDRPGFRDFSSI-HELPYDHSILLENLMDPAHIPISHDRTSYPAKREDAQPLDFEV 270
Query: 230 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 282
T + G G W P + F PC++ + E N + + L
Sbjct: 271 TERTNRGFAGRWGNAKDQPLSNFLRFEAPCVLQN--------NRETPNKKGGIDYFTGLF 322
Query: 283 VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QER 337
+C P+ + K+ ++ R AS ++ F + A +V +D+ + Q +E+
Sbjct: 323 LCRPTGQGKSMVIVRFG-STASTVRLNLFPAWFLHQNACRVFEQDMGFLSSQNEVLMKEK 381
Query: 338 MNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
+ NL D + YR W D + G
Sbjct: 382 VPTKELYLNLRSS-DTWVLEYRRWMDKVGHG 411
>gi|408376802|ref|ZP_11174406.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
gi|407749492|gb|EKF61004.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
Length = 353
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 135/310 (43%), Gaps = 37/310 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ +LK ++P +P V++R ++G P + + C HR PL LG +
Sbjct: 9 NAWYAAAYDVELKR-QLLPRTICNKPVVLYRKENGTPVALADACWHRLVPLSLGRLEGDN 67
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG E+ G+C MPS N +KS P E+ IWIWPGD P P L+
Sbjct: 68 VICGYHGLEFDETGRCVYMPSQDTINPSACVKSYPIAEKHRFIWIWPGD--PALADPALV 125
Query: 177 PPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P + + ++E+ ++ L++DNL+DL H F H S+ G + F +
Sbjct: 126 PDMHWNQDPDWAADGKLIEVKCDYRLVVDNLMDLTHETFVHGSSI--GNRAVAEAPFESS 183
Query: 232 ASGLQGY---W----DPYP-----------ID----MEFRPPCMVLSTIGISKPGKLEGQ 269
S Y W DP P +D + F PC V +G+++ G Q
Sbjct: 184 HSDRFAYITRWMEDIDPPPFWRKQFGRPGKVDRWQIIRFEAPCTVTIDVGVAEAGTGAKQ 243
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 329
R + + L+ PS+ K + + ++ L + L R V ED
Sbjct: 244 GDRSKGVNGYVLNTITPSTDKTCLYFWAFARNYD--LGNQARTHEL-REGVAGVFREDEE 300
Query: 330 LVLGQQERMN 339
++ QQ ++
Sbjct: 301 VLEAQQRAID 310
>gi|374367149|ref|ZP_09625217.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
gi|373101343|gb|EHP42396.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
Length = 348
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 140/343 (40%), Gaps = 43/343 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ +L + C E V+FRG+DG +++ C HR PL LG V +
Sbjct: 3 LKNTWYVACTPDELAGKPLGRTIC-NEKMVLFRGEDGNVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTATIP 173
G++ C YHG DGKC +M ++ I+S P E+ G +W WPGD ATIP
Sbjct: 62 GQLVCGYHGMTMGRDGKCARMAGQRVGGFPSIRSYPAVERYGFVWAWPGDAALADAATIP 121
Query: 174 CL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 232
L S H + + ++ L++DNL+DL H + H S+ + + ++ PA
Sbjct: 122 HLEWAVSADWAHGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----AEIEESAPA 176
Query: 233 SGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISK 262
+ ++G +W D P D F PP V+ +G++
Sbjct: 177 TKVEGDMVVTGRHMEGIMPPPFWAAALRGNGLADDVPCDRWQICRFTPPSHVMIEVGVAH 236
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
GK Q + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAEPQHKASSIVVDFITPETETSIWYFWGMARNFKADDAQ---LTETIRDGQGK 293
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
+ EDL ++ QQ + L + D GV+ R D L
Sbjct: 294 IFAEDLEMLEAQQRNILANPERKLLKLNIDAGGVQARRILDRL 336
>gi|168002521|ref|XP_001753962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694938|gb|EDQ81284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 481
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 34/296 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ + F+ V+F G C ++ C HR L G + +G+++
Sbjct: 29 WYPMYLTDEMPKAAPLGLTVFDRQLVLFYDDKGELNCFEDRCPHRLAKLSEGKMTDGKLE 88
Query: 121 CPYHGWEYSTDGKCEKMPSTQLR-NVKIKSLPCFEQ------EGMIWIWPGDEPPT--AT 171
C YHGW++ G+C K+P QL KI C ++ +G+IW+W GD
Sbjct: 89 CLYHGWQFEGSGQCTKIP--QLAPGAKIPKQACAKKYEVKVSQGVIWVWLGDRATADPKK 146
Query: 172 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 227
+P GF H + ELP ++ +LL+NL+D AH P +H T T AK + +LV
Sbjct: 147 VPWYEHYEREGF-YHLSTIHELPYDYSILLENLMDPAHIPISHDRTDTNAKRENAQALVF 205
Query: 228 FLTP--ASGLQGYWD-----PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
+T + G G W + F PC + + + KP +G +L
Sbjct: 206 EVTERTSRGFAGIWKEISSPEFTNTTRFEAPCCLRNDKVVDKP---DGSK-----DYLSA 257
Query: 281 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ 335
+ +C PS + K+ L+ R S F + K +P + + V +D+ + Q
Sbjct: 258 VFLCRPSGQGKSMLIVRFGSTKFPDIFKKIP--GWFLHKTSNTVFEQDMGFLASQN 311
>gi|398811407|ref|ZP_10570207.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
gi|398080780|gb|EJL71578.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
Length = 351
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 41/335 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ + ++ D + C E+ V++R +G +++ C HR PL LGSV EG
Sbjct: 4 KNAWYVACTANEIDDKPLGRMICGEK-LVLYRAAEGKAAALEDFCPHRGAPLSLGSVVEG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E DGK MP ++R I+S P E+ G +W+WPGD P + P L
Sbjct: 63 KLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIRSFPVIERYGFVWVWPGD--PALSDPAKL 120
Query: 177 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
S + + + ++ L++DNL+DL H + H ++ + + K +T
Sbjct: 121 HHLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHATSIGQKEIDETPTKTVTE 180
Query: 232 ASGLQG-----------YW----------DPYPIDM----EFRPPCMVLSTIGISKPGKL 266
+ +W D P+D F PP VL +G++ GK
Sbjct: 181 GDTVTTARHMENIMAPPFWRMALRGNHLADDVPVDRWQICRFTPPSHVLIEVGVAHAGK- 239
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLY--RMSLDFASVLKHVPFMQYLWRHFAEQVL 324
G A + + V + +T + Y M+ +F H + R ++
Sbjct: 240 -GGYHADPAHKVSSIVVDFITPETETSIWYFWGMARNFQP---HDKALTASIREGQGKIF 295
Query: 325 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+EDL ++ QQ + L + D GV+ R
Sbjct: 296 SEDLEMLESQQRNLLAHPQRQLLKLNIDSGGVQSR 330
>gi|217076804|ref|YP_002334520.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|419761274|ref|ZP_14287530.1| oxidase-related protein [Thermosipho africanus H17ap60334]
gi|217036657|gb|ACJ75179.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|407513580|gb|EKF48477.1| oxidase-related protein [Thermosipho africanus H17ap60334]
Length = 326
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 142/340 (41%), Gaps = 46/340 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ V S +LK +V F E V +R KDG C+ + C HR L G + E
Sbjct: 2 IKNQWYIVMSSKELKKGKLVGVTRFGEKLVFWRSKDGRVNCISDICCHRGASLSHGRLLE 61
Query: 117 G-RIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGDEPPT 169
RI CP+HG+EY TDGK + +P+ RNV K+K +E IW+W GD PT
Sbjct: 62 NDRIMCPFHGFEYDTDGKVKVIPAFG-RNVEVPERYKVKKYYTYEIADFIWVWYGDGEPT 120
Query: 170 ATIPCLLPPSGFEI-HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 219
IP E ++E + + ++N LD+ H P H +T KG
Sbjct: 121 H-IPKYFDDISEEFSYSEFTQVWNVNYTRAIENQLDVVHVPIVHYNTIGKGNRTVVDGPI 179
Query: 220 --WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
W ++ F G P +++ V LE + H
Sbjct: 180 VKWQNETMFYFYVHNRVDDGTPAKKPDEIDINDISKVY----------LEFKFPNFWQNH 229
Query: 278 -LHQLHVC---LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
L +L V +P + T++ R + F + + + F VLN+D R+V
Sbjct: 230 ILDKLRVTAAFVPIDEEHTKIYLRFYVAFTKIRFINKIISSIGNIFNRIVLNQDRRVVET 289
Query: 334 Q-----QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
Q + +MN + +LP+ + YR R+ L+ G
Sbjct: 290 QIPKKTELKMNEKLILGDLPI------IEYRKKREELKLG 323
>gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum]
Length = 553
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 36/332 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ D + +++ V+FR + C ++ C HR L G + +GR++
Sbjct: 103 WYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLE 162
Query: 121 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 173
C YHGW++ +GKC K+P ++ +K+ + +G++W+W + P + IP
Sbjct: 163 CLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIP 222
Query: 174 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 229
GF+ ELP +H +LL+NL+D AH P +H T AK +L +
Sbjct: 223 WFENFARPGFQ-DISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEV 281
Query: 230 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 281
T + G G+W P + F PC++ + I K G++ H L
Sbjct: 282 TERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVDKNGEI---------NHFSGL 332
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 336
+C P+ + K+ L+ R S L + F ++ + A +V +D+ + Q +E
Sbjct: 333 FLCRPTGQGKSMLIVRFGATKRSPLIKL-FPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391
Query: 337 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
++ NL D YR W D + G
Sbjct: 392 KVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 422
>gi|303278118|ref|XP_003058352.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459512|gb|EEH56807.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 573
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 56/331 (16%)
Query: 51 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD---------GIPGCVQNT 101
+P + N W+PVAF DL DD F EP V ++ K G C +
Sbjct: 92 EPSSYDWHNQWYPVAFVADLVDDAPFTFTLLGEPLVFWKDKTTTTNSASGGGTYRCTADK 151
Query: 102 CAHRACPLHLGSVNE-GRIQCPYHGWEY-STDGKCEKMP---------STQLRNVK--IK 148
C HR PL G VN+ G I+C YHGW + GKC +P T L + + +
Sbjct: 152 CPHRLVPLSEGRVNDAGEIECGYHGWTFDGASGKCTSIPQLPATGNAIDTALASPRSCVT 211
Query: 149 SLPCFEQEGMIWIWP--------GDEPPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLL 199
P +GM+++ P PP IP + P + +I +LP+++ LL
Sbjct: 212 PYPTAVAQGMLFVLPVSALKSDPASRPPVPVIPEIDDPGASHCVVQDISRDLPMDYATLL 271
Query: 200 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA---SGLQGYWDPYPID-------MEFR 249
+N++D++H PFTH + + + +V LT G +G W P + F+
Sbjct: 272 ENVMDISHVPFTHHGSVGRRENATPVVAELTTELADGGFEGIWKEGPRNGKYGSQYTHFQ 331
Query: 250 PPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 309
P ++ T+ T Q T + +P++ + RL+ R F +
Sbjct: 332 APALMRHTL-----------RTDQFTT--LTVVYAVPTTPGRCRLMARFPFIFKAAPPRF 378
Query: 310 PF--MQYLWRHFAEQVLNEDLRLVLGQQERM 338
F + W H + + ED ++ L +QER+
Sbjct: 379 FFKLVPRWWSHLNQNSILEDDQIFLHKQERL 409
>gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 150/360 (41%), Gaps = 50/360 (13%)
Query: 40 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
P V G K W+P+ + D+ +D + F++ V++R + C +
Sbjct: 73 PSSQEEVRGERHVAEYDWKEEWYPLYLTKDIPEDAPMGLTVFDKQLVLYRDGKDLLQCYE 132
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFE 154
+ C HR L G + +GR++C YHGW++ +GKC K+P R+ +K+ +
Sbjct: 133 DRCPHRLAKLSEGQLVDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVKD 192
Query: 155 QEGMIWIWPGDEPPTATIPCLLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHA 208
+G++W+W P P LP GF + ELP +H +LL+NL+D AH
Sbjct: 193 SQGVVWVWMSHRTPPN--PDKLPWFENFARPGFR-DTSTIHELPYDHSILLENLMDPAHV 249
Query: 209 PFTHTST--FAKGWSVPSLVKFLTPAS--GLQGYWDPYPID-----MEFRPPCMVLSTIG 259
P +H T AK L +T + G G+W + + F PC++
Sbjct: 250 PISHDRTDWSAKREDAQPLCFKVTERTDRGFAGWWGREKDESLLNFLRFEAPCVL----- 304
Query: 260 ISKPGKLEGQNTRQCAT------HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 313
QN R+ + L +C PS + K+ L+ R S + + F +
Sbjct: 305 ---------QNNREIVDKNGEKHYFTGLFLCRPSGQGKSMLIVRFGSTKRSPIAKL-FPE 354
Query: 314 YLWRHFAEQVLNEDLRLVLGQ-----QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
+ + A +V +D+ + Q +E++ NL D YR W D + G
Sbjct: 355 WYFHQNAGKVFEQDMGFLSSQNEILMKEKVPTKELYLNLRSS-DTWVAEYRRWMDKVGHG 413
>gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 540
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 36/332 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + ++ +D + F++ V+F+ +G C ++ C HR L G + +GR++
Sbjct: 90 WYPLYLTLNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLE 149
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDEPP--TATI 172
C YHGW++ +GKC K+P + KI C + +G+IW+W + P + +
Sbjct: 150 CLYHGWQFEGEGKCVKIPQLPA-DAKIPQAACVKTYEVRDSQGVIWVWMSLKTPPNVSKL 208
Query: 173 PCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 229
P + E + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 PWFENFARPEFQDISTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEV 268
Query: 230 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 281
T + G G+W P + F PC++ + I K G++ + L
Sbjct: 269 TERTHRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEI---------NYFSGL 319
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 336
+C P+ + K+ L+ R S L V F ++ A +V +D+ + Q +E
Sbjct: 320 FLCRPTGQGKSMLIVRFGGTKRSPLAKV-FPKWYLHQNASKVFEQDMGFLSSQNEILLKE 378
Query: 337 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
+++ NL D YR W D G
Sbjct: 379 KVSTKELYLNLKSS-DTWVAEYRKWMDKAGHG 409
>gi|78213302|ref|YP_382081.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
gi|78197761|gb|ABB35526.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
Length = 456
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 28/298 (9%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 118
W+P+++ DL T F E VI+ + V + C HR PL G +NE G
Sbjct: 31 WWPISYVQDLDPKTPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRINEEGL 90
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIK--SLPCFEQEGMIWIWPGDEPPTATI 172
++CPYHGW + DG+C+++P +TQ N + + SLP ++G++++W G P A
Sbjct: 91 LECPYHGWSFDGDGQCQRVPQALENTQPNNRRSRCASLPTATRQGLLFVWMG--APDAAD 148
Query: 173 PCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 224
P LP P + + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 149 PSQLPLVPALEDNPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGKRENAAP 207
Query: 225 LVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 282
+ +T ASG YW+ P R + + P + T + + +
Sbjct: 208 VEASITGEDASGFTAYWEEGP-----RRGKLGAQSTTFHAPQLMWHDLTAKGFGRILTVV 262
Query: 283 VCLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNEDLRLVLGQQERM 338
+P R + RL R F S + + ++ W +H + ED ++ L QER+
Sbjct: 263 YAVPIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERV 320
>gi|307107873|gb|EFN56114.1| hypothetical protein CHLNCDRAFT_51738 [Chlorella variabilis]
Length = 553
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 139/370 (37%), Gaps = 68/370 (18%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVA + DL D PF F V++R G C Q+ C HR PL G V EG++
Sbjct: 87 WYPVAVAADLPTDRPHPFTLFGRQLVLWRDAAGAWRCFQDACPHRLAPLSEGRVVEGQLV 146
Query: 121 CPYHGWEYSTDGKCEKMPSTQ----------LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
C YHGW + GKC ++P R + P E G++W+WP P
Sbjct: 147 CSYHGWSFEGTGKCTRVPQAMDERSEAAACGSRRACAATQPTAEAAGLVWVWPDASPGAP 206
Query: 171 TIPCLLPPSGFEIHAEI------------------------VMELPIEHGLLLDNLLDLA 206
P +H ++ V E P +++N+LD
Sbjct: 207 EQAAAAP---LPVHPDLLAGGAGGGATPGSGSFVNIGGGWLVRECPYGFDTMIENILDPG 263
Query: 207 HAPFT-HTSTFAKGWSVPSLVK----------FLTPASGLQGYWDPYPIDMEFRPPCMVL 255
H + H + +VP VK F T + +EFRPPC V
Sbjct: 264 HVMWAPHGLLGRREDAVPYAVKLQGEISLEGGFATSLGASSRKLEVQRRSLEFRPPCFVR 323
Query: 256 STI-----GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA------- 303
TI G G L + + L +P SR LL S A
Sbjct: 324 QTIAPGELGPGPTGWLPPCHAPSKGSSLVTCGYAVP-SRPGHCLLVTTSYAEAGSGAGGL 382
Query: 304 -SVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN----LPVGYDKLGVRY 358
+ L VP ++L + ++VL+ DL L+ GQ+ R+ W +P D V +
Sbjct: 383 RAALGLVP--RWLLHVYTQEVLDGDLILLHGQERRLEKAGGSWRSAFFMPTPSDGAVVAF 440
Query: 359 RLWRDALEKG 368
R W D + G
Sbjct: 441 RRWFDDMAGG 450
>gi|160896799|ref|YP_001562381.1| vanillate monooxygenase [Delftia acidovorans SPH-1]
gi|160362383|gb|ABX33996.1| Vanillate monooxygenase [Delftia acidovorans SPH-1]
Length = 363
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 141/339 (41%), Gaps = 46/339 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S +++D + C E +R + GI V++ C HR PL LG V EG
Sbjct: 6 KNTWYVAATSDEIQDKPLGRRICGERI-AFYRAQHGI-AAVEDFCPHRGAPLSLGFVCEG 63
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD+ A IP
Sbjct: 64 KLVCGYHGLEMGCDGKTIAMPGQRVRGFPEIRSYPVEERHGFIWVWPGDKALADAALIPK 123
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L E + + + ++ L++DNL+DL H + H S+ + + K T
Sbjct: 124 LPWHDNPEWAYGGGMFHIQADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTETRGE 183
Query: 234 GL-------------------------QGYWDPYPIDM----EFRPPCMVLSTIGISKPG 264
G G D P+D F PP VL +G++ G
Sbjct: 184 GADVEVVTSRFMNDIPAPPFWKMALRSNGLADDVPVDRWQVCRFTPPSHVLIEVGVAHAG 243
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRHFA 320
+ + + P + + + M+ F A V + R
Sbjct: 244 HGGYDAPDEHKVYSMVVDFITPETEESMWYFWGMARRFNPGDAEVTDRI-------REGQ 296
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL+++ QQ ++ + L + D GV+ R
Sbjct: 297 HKIFSEDLQMLELQQRNLSAHPDRKLLKLNIDAGGVQSR 335
>gi|239820364|ref|YP_002947549.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805217|gb|ACS22283.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 352
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 139/343 (40%), Gaps = 57/343 (16%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + + DD + E V++R +G +++ C HR PL LG V EG
Sbjct: 4 KNTWY-VACTGNEIDDKPLGRKICGENLVLYRAAEGKATALEDFCPHRGAPLSLGRVVEG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E DGK MP ++R I+S P E+ G +WIWPGD P L
Sbjct: 63 KLVCGYHGLEMGCDGKTVAMPGQRVRGFPPIRSFPVIERYGFVWIWPGD-------PALA 115
Query: 177 PPSGFE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------------- 212
P+ + + + ++ L++DNL+DL H + H
Sbjct: 116 DPAKLHHLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPT 175
Query: 213 ----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTI 258
TS F + S P + + L D P+D F PP VL +
Sbjct: 176 TTKTEGDQVTTSRFMENISAPPFWRMALRGNHLA---DDVPVDRWQICRFTPPSHVLIEV 232
Query: 259 GISKPGKLEGQNTRQCATHLHQLHV--CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 316
G++ GK G A + + V P + + M+ +F H +
Sbjct: 233 GVAHAGK--GGYDADPAHKVSSIVVDFITPETETSHWYFWGMARNFQP---HDKALTASI 287
Query: 317 RHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
R ++ +EDL ++ QQ + N L + D GV+ R
Sbjct: 288 REGQGKIFSEDLEMLESQQRNLLAHPNRSLLKLNIDSGGVQSR 330
>gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa]
gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 40/346 (11%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 107
G V YN W+P+ + D+ DD + + F++ V+++ G C ++ C HR
Sbjct: 88 GAVVDYN--WTEEWYPLYLTKDVPDDAPLGLNVFDKQLVLYKDGQGELRCHEDRCPHRLA 145
Query: 108 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIW 160
L G + +GR++C YHGW++ +GKC K+P QL N KI C E +G++W
Sbjct: 146 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIP--QLPANAKIPQSACVKTYEVKESQGVVW 203
Query: 161 IWPGDEPP--TATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST- 215
+W + P +P GF+ + ELP +H +LL+NL+D AH P +H T
Sbjct: 204 VWMSLKTPPNFKKVPWFENFARPGFQ-DTSTIHELPYDHSILLENLMDPAHIPISHDRTD 262
Query: 216 -FAKGWSVPSLVKFLTPAS--GLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLE 267
+K +L +T + G G W + F+ PC++ + I E
Sbjct: 263 WTSKREDAQALRFEVTERTHRGFAGRWGKEKDQKLRSFLRFQAPCVLSNDI--------E 314
Query: 268 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNE 326
+ + + L +C P+ + K+ ++ R + + K +P ++ + A ++ +
Sbjct: 315 FADEKGVTQYFTGLFLCRPTGQGKSMIIVRFGATKRPQMAKVIP--KWYFHQNACKIFEQ 372
Query: 327 DLRLVLGQQE-RMNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 368
D+ + Q E M L + D YR W D + G
Sbjct: 373 DMGFLSSQNEVLMKEKVPTKELYINLKSSDTWVAEYRKWMDKVGHG 418
>gi|425856426|gb|AFX97753.1| chlorophyllide a oxygenase, partial [Auxenochlorella
protothecoides]
Length = 88
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 208 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 267
APFTHTSTFAKGW +P +VKF L G W PYPI M F PP MV+S IG+S+PG +E
Sbjct: 1 APFTHTSTFAKGWPIPDVVKFQA-TKLLTGNWQPYPITMSFAPPNMVVSLIGLSRPGVVE 59
Query: 268 -GQNTRQCATHLHQLHVCLPSSRKKTRLL 295
G + C HLHQLHVCLPS TRLL
Sbjct: 60 RGLSAESCKRHLHQLHVCLPSRPGHTRLL 88
>gi|333916755|ref|YP_004490487.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
gi|333746955|gb|AEF92132.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
Length = 363
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 141/339 (41%), Gaps = 46/339 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S +++D + C E +R + G+ V++ C HR PL LG V EG
Sbjct: 6 KNTWYVAATSDEIQDKPLGRRICGERI-AFYRAQHGV-AAVEDFCPHRGAPLSLGFVCEG 63
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD+ A IP
Sbjct: 64 KLVCGYHGLEMGCDGKTIAMPGQRVRGFPEIRSYPVEERHGFIWVWPGDKALADAALIPK 123
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L E + + + ++ L++DNL+DL H + H S+ + + K T
Sbjct: 124 LPWHDNPEWAYGGGMFHIQADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTETRGE 183
Query: 234 GL-------------------------QGYWDPYPIDM----EFRPPCMVLSTIGISKPG 264
G G D P+D F PP VL +G++ G
Sbjct: 184 GADVEVVTSRFMNDIPAPPFWKMALRSNGLADEVPVDRWQVCRFTPPSHVLIEVGVAHAG 243
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRHFA 320
+ + + P + + + M+ F A V + R
Sbjct: 244 HGGYDAPDEHKVYSMVVDFITPETEESMWYFWGMARRFNPGDAEVTDRI-------REGQ 296
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL+++ QQ ++ + L + D GV+ R
Sbjct: 297 HKIFSEDLQMLELQQRNLSAHPDRKLLKLNIDAGGVQSR 335
>gi|325277574|ref|ZP_08143162.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097289|gb|EGB95547.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. TJI-51]
Length = 355
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 140/333 (42%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG+ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKI-VFYRGQQNRVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ A IP
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKAFAVVERHGFIWVWPGDQAQADPALIPH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------GW 220
L E + + + ++ L++DNL+DL H + H S+ + G
Sbjct: 123 LEWADNEEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTGD 182
Query: 221 SVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 268
V + + + P A G D P+D F PP VL +G++ GK
Sbjct: 183 EVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKGGY 242
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
Q + P S + M+ +FA+ H + R ++ +EDL
Sbjct: 243 HAAAQHKAASIVVDFITPESDTSIWYFWGMARNFAA---HDQNLTADIREGQGKIFSEDL 299
Query: 329 RLVLGQQERM--NNGANVWNLPVGYDKLGVRYR 359
++ QQ+ + N G N+ L + D GV+ R
Sbjct: 300 EMLERQQQNLLANPGRNLLKLNI--DAGGVQSR 330
>gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa]
gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa]
Length = 556
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 34/297 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P+ + D+ DD + F++ V+++ G C ++ C HR L G + +GR++
Sbjct: 106 WYPLYLTKDVPDDAPLGLTVFDKQVVLYKDGQGELRCFEDRCPHRLAKLSEGQLIDGRLE 165
Query: 121 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIWIW--PGDEPPTAT 171
C YHGW++ +G C K+P QL N KI C E +G++W+W +P
Sbjct: 166 CLYHGWQFEGEGNCVKIP--QLPANAKIPQSACVKTYEVRESQGVVWVWMSSKSQPNINK 223
Query: 172 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 227
+P GF+ + V ELP +H +LL+NL+D AH P +H T AK + L
Sbjct: 224 LPWFENFARPGFK-DSSAVHELPYDHSILLENLMDPAHIPISHDRTDLSAKRENAQPLRF 282
Query: 228 FLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
+T + G G+W P + F PC VLS E + + +
Sbjct: 283 EVTERTDRGFAGWWGGGDAQTLPNFLRFEAPC-VLSN-------NREFIDEKGVKQYFSG 334
Query: 281 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
L +C P+ + K+ L+ R + +P ++ + V +D+ + Q E
Sbjct: 335 LFLCRPTGQGKSMLIVRFGGTAMPQIANWIP--EWFFHQRGCTVFEQDMGFLSSQNE 389
>gi|428210223|ref|YP_007094576.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428012144|gb|AFY90707.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 364
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 134/320 (41%), Gaps = 61/320 (19%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+PV ++ L+ ++P +++ +FR DG + + CAH+ LH G +
Sbjct: 24 DYWYPVGWANKLQPGHIMPVTIWKQAIAVFRDTDGQLHALDDACAHKGVALHKGQIQGKH 83
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP- 173
+ CPYHGWE++ G+C K+P + +L +++S P E+ +IWI+PGD +IP
Sbjct: 84 LLCPYHGWEFNGAGQCVKIPYLPETHKLPCAQVRSYPVREKYNLIWIFPGDASLATSIPL 143
Query: 174 ----------CLLP--PSGFEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
CL+ P+ F+ H I E + + HG L NL +G
Sbjct: 144 PEIPEFDDPDCLMVPIPAHFQAHFTICNENTMDVFHGFLHKNL---------------QG 188
Query: 220 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
W P L T S + D ++ +G+S G + TR H
Sbjct: 189 WFDPVLTSLKTTESSVHA-------DYRVSYKGVMTKILGLSDRG--DEVTTRTVTLHYQ 239
Query: 280 QLH-----------------VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ-YLWRHFAE 321
H + ++ T + R++L V P + Y+WR
Sbjct: 240 YPHYHSSLEGVSSLYLMRSPMGATETKSFTLMFLRLNLPKWLVQPFKPLISAYIWRFLFS 299
Query: 322 QVLNEDLRLVLGQQERMNNG 341
+ L++D+ ++ +Q +N
Sbjct: 300 KFLDQDIEMMESEQRTYSNN 319
>gi|427702133|ref|YP_007045355.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427345301|gb|AFY28014.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 435
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 24/298 (8%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE 116
+ WFPVA+ DL F +E V++ + G + + C HR PL G +N
Sbjct: 7 RQHWFPVAYLRDLDPARPTAFTLLDEDLVLWWDRAGQLWRAFADVCPHRLVPLSQGRINA 66
Query: 117 G-RIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 169
G ++CPYHGW ++ DG C +P S + ++ E +G+++++ G+E
Sbjct: 67 GGELECPYHGWSFAGDGHCTAIPQAEPGASPSAVRSRCRAYATAEAQGLLFVFAGEEADA 126
Query: 170 ATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
A +P L P G+ + + +LP++ LL+N+LD++H PFTH T K + +
Sbjct: 127 AAVPLPLVPVLEEPGWFVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAAPV 185
Query: 226 VKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 282
V +T +SG +G+ W+ P R + + + PG + T + +
Sbjct: 186 VATIT-SSGPEGFTALWEEGP-----RRGKLGSQSTTYAAPGLMWHDLTAPSFARILTVV 239
Query: 283 VCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAEQVLNEDLRLVLGQQERM 338
P R + RL R F S + + ++ W +H A + ED ++ L QER+
Sbjct: 240 YATPIRRGECRLFARFPFQFESRLPPLLLGLRPRWLQHIANHTVLEDDQVFLHWQERV 297
>gi|403731430|ref|ZP_10949288.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
gi|403202209|dbj|GAB93619.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
Length = 371
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 44/341 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N W+ A+ ++ +V +P ++R DG P + + C HR PL +G+ V
Sbjct: 19 NAWYVAAWDHEVGRSEIVARTIAGKPMALYRTTDGRPVALADACWHRLAPLSMGTLVGSD 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QCPYHG ++++ G+C KMP+ + N + S P E+ IW+WPGD PT P
Sbjct: 79 GVQCPYHGLQFNSAGRCTKMPAQETINPSAMVASYPVVERHRFIWVWPGD--PTQADPST 136
Query: 176 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------GWSVP 223
+P F++ + +++ + L+LDNL+DL H F H+S+ + + V
Sbjct: 137 IPDM-FQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQDELSESDFVVT 195
Query: 224 SLVKFLTPAS--------------------GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+ +T + G G D + I +EF+ P + +G+++
Sbjct: 196 HDERTVTVSRWMLDIEAPPFWRKNMNDKFPGFSGRVDRWQI-IEFQAPSTIRIDVGVARA 254
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G R + ++ P + + D+ + R V
Sbjct: 255 GTGAPDGDRSQGVNGFVMNTITPIDERTALYFWAFMRDYR---LDSQLITTQLREGVHGV 311
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
ED ++ QQ+ + N +NL + + VR + R
Sbjct: 312 FGEDEAMLTAQQKAIEANPDHEFYNLNIDAGGMWVRRIIQR 352
>gi|33865393|ref|NP_896952.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
WH 8102]
gi|33632562|emb|CAE07374.1| cell death suppressor protein Lls1 homolog [Synechococcus sp. WH
8102]
Length = 455
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 54/310 (17%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 118
W+P+++ DL F E VI+ + G V + C HR PL G +N+ G+
Sbjct: 17 WWPISYLQDLDPQRPNRFTLLERDLVIWWDQSGESWRVFPDVCPHRLVPLSEGRINDAGQ 76
Query: 119 IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
++CPYHGW + DG+C ++P R + SLP +G++++W G P +
Sbjct: 77 LECPYHGWSFDGDGQCRQIPQALENTQPDSRRSRCASLPTASAQGLLFVWMGS--PDSAD 134
Query: 173 PCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 224
P LP P + + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 135 PEQLPLVPALEENPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGKRENAAP 193
Query: 225 LVKFLTP--ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--HQ 280
+ +T ASG + YW+ P + GKL Q+T A L H
Sbjct: 194 VEATITAEDASGFKAYWEEGP------------------RRGKLGAQSTTFLAPQLMWHD 235
Query: 281 LHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNED 327
L +P R + RL R F S L + ++ W +H + ED
Sbjct: 236 LTAKGFGRILTVVYAVPIRRGECRLFARFPFQFQSALPRLLIGLRPRWLQHIGNHKVLED 295
Query: 328 LRLVLGQQER 337
++ L QER
Sbjct: 296 DQVFLHWQER 305
>gi|392950448|ref|ZP_10316003.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|392950635|ref|ZP_10316190.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859410|gb|EIT69938.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859597|gb|EIT70125.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
Length = 359
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 132/318 (41%), Gaps = 39/318 (12%)
Query: 53 YNTR-LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
YN + L N W+ A S++L+ + + + P V++R +DG + + C HR PL +
Sbjct: 2 YNGKYLLNTWYVAALSSELESEKLFARTLLDTPVVMYRQRDGAAVALHDRCPHRFSPLSM 61
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPP 168
G + + CPYHG ++T G+C P K+++ P E+ G IWIW G+ P
Sbjct: 62 GHRDGDNVVCPYHGLRFNTAGQCVHNPHGNGAIPAAAKVRTFPLIERYGFIWIWMGEVPA 121
Query: 169 TAT-IPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 221
A+ +P P P+G A M P + L+ DN++DL+H H + +G
Sbjct: 122 DASALPDYGPIDRGHPNGV---AHTYMRRPCHYELITDNVMDLSHVDHLHGEIISTRGQL 178
Query: 222 VPSLVKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGI 260
P + K + +W P P + + +R P + TIG
Sbjct: 179 SPKIPKLQEADGEISVHWQWEQTPPIMIFNAFLPEPGASARHFVRVAWRAPTHIQLTIGA 238
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
++ T T + LH C P + T + + M+ H
Sbjct: 239 TQDSG--APLTHDACTSQYDLHTCTPETDSTTHYFFATRRNHFEEDAEYNRMKITGMH-- 294
Query: 321 EQVLNEDLRLVLGQQERM 338
+ +NED ++ Q+RM
Sbjct: 295 DAFVNEDGPVLDAVQKRM 312
>gi|17231846|ref|NP_488394.1| hypothetical protein alr4354 [Nostoc sp. PCC 7120]
gi|17133490|dbj|BAB76053.1| alr4354 [Nostoc sp. PCC 7120]
Length = 443
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 149/344 (43%), Gaps = 47/344 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR--GKDGIPGCVQNTCAHRACPLHLGSVNE-- 116
W+PV+ DL P VI++ +G + + C HR PL G V++
Sbjct: 11 WYPVSPIEDLDPKRPTPVTLLGIRLVIWKPQSSEGFRIFI-DQCPHRLAPLSEGRVDDKT 69
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVK---IKSLPCFEQEGMIWIWP----- 163
G + C YHGW++ +G C +P + +N K + SLP +Q ++W+WP
Sbjct: 70 GNLMCSYHGWQFDPEGVCTHIPQAENPEIVTKNQKDFCVISLPVRQQNDLLWVWPDVKSQ 129
Query: 164 --GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAK 218
D+ P P + GF + + V +L + L++N+ D +H PF H +
Sbjct: 130 ELADQTPLPLSPQVDASKGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREQ 188
Query: 219 GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
+ P + TP + + F PPC + I I GK G T
Sbjct: 189 ARATPISIMQSTPGLIEAVADGRFKAKITFEPPCRLEYAISIGNDGKKVGLVT------- 241
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQ-- 334
CLP S K+R++ + +FA +L H+ W H + VL+ D+ L+ Q
Sbjct: 242 ----YCLPVSPGKSRIVAQFPRNFAKILYHL--TPRWWDHVKTRNLVLDGDMILLKQQEH 295
Query: 335 --QERMNNGA--NVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
QER + + V+ +P D+L + +R W D +G QLP+
Sbjct: 296 FLQERQLSASWKTVYKMPTSADRLVIEFRKWFDKYCEG--QLPW 337
>gi|412985453|emb|CCO18899.1| cell death suppressor protein Lls1-like [Bathycoccus prasinos]
Length = 598
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 55/320 (17%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-----DGIP--GCVQNTCAHRACPLHLGS 113
W+P+AF DL+DD F P V ++ K D P CV + C HR PL G
Sbjct: 113 WYPIAFECDLEDDAPYAFTLLGTPLVFWKNKKSGASDDAPEYSCVADMCPHRLAPLSEGR 172
Query: 114 VNE-GRIQCPYHGWEYS-TDGKCEKMP---------STQLRNVKIKSLPCFEQ--EGMIW 160
+N+ G I+C YHGW + GKC +P T L + + + P + + +G++W
Sbjct: 173 INDKGEIECGYHGWTFEGKSGKCTSIPQLGSEGPAVDTALNSPRACATPYYTKVAQGVLW 232
Query: 161 IWPGDEPPTATIPCLLPPSGFE-------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
+P T T+ L P ++ ++ +LP+++ LL+N++D++H PFTH
Sbjct: 233 CYPTKIDGTKTVDDLPPLPLIPELDDPMCVYQDVFRDLPMDYSTLLENVMDVSHVPFTHH 292
Query: 214 STFAKGWSVPSLVKFLTPA------SGLQGYWDPYPID-------MEFRPPCMVLSTIGI 260
++ K + +V LT +G G W P EF+ P ++ T+
Sbjct: 293 NSVGKRENATPVVLELTTEDKKVSRNGFTGEWKEGPRKGKYGTQYTEFQAPALMRHTLRT 352
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRH 318
+ L + +P + K RL+ R F + L F + + H
Sbjct: 353 DQFTTL-------------TVVYAVPIAPGKCRLIARFPFIFKAALPRKLFGLFPKWYTH 399
Query: 319 FAEQVLNEDLRLVLGQQERM 338
+ + ED ++ L +QER+
Sbjct: 400 TNQNAILEDDQIFLHKQERL 419
>gi|428211927|ref|YP_007085071.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|428000308|gb|AFY81151.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 469
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 140/341 (41%), Gaps = 34/341 (9%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRA 106
G P+ ++ W+PV + DL ++ F I+ K G ++ C HR
Sbjct: 20 GGNDPHRFDVREVWYPVYYLQDLDKSKIMRFTLLGVDLAIWWDKTGQSWRAFEDKCPHRL 79
Query: 107 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 158
PL G +NE G I+CPYHGW +S GKCE +P + Q +++ P E +G+
Sbjct: 80 APLSEGRINEQGWIECPYHGWAFSATGKCETIPQQNEGGKAEQSERACVRNFPTAEHQGL 139
Query: 159 IWIWPG--DEPPTATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
++++ G + +P + P P + + +LP + LL+N+LD +H P+TH
Sbjct: 140 LFVYAGNPENAKQTKVPLIDPLEESPDKW-VCLNTFRDLPYDALTLLENVLDASHIPYTH 198
Query: 213 TSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
T + S V A+G QG+ W+ P R + PG +
Sbjct: 199 HRTVGNR-ANASKVDLEVIAAGKQGFEGLWEEGP-----RKGTLGSQQTHFIAPGLMWHD 252
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL--KHVPFMQYLWRHFAEQVLNED 327
T + + P + + RL R FAS + + + H + + ED
Sbjct: 253 LTSKQFGRTMTVVYATPIRKGECRLFARFPFQFASKVPATFIKLTPQWYSHIGQNAILED 312
Query: 328 LRLVLGQQERMNNG-------ANVWNLPVGYDKLGVRYRLW 361
++ L QER A + LP D + +R W
Sbjct: 313 DQIFLYHQERYLEAAGGSEKIAKAFYLPTKADLFVLAFRKW 353
>gi|427734356|ref|YP_007053900.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
gi|427369397|gb|AFY53353.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
Length = 445
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE--GR 118
W+PV+ D+ VI++ K + C HR PL G V+E G
Sbjct: 11 WYPVSPVEDIDPKKPTAVTVLGLRLVIWKPKLSDYRVFLDKCPHRLAPLSEGRVDEKTGN 70
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ C YHGWE+ +G C ++P + +N+ SLP ++ ++W+W P
Sbjct: 71 LMCSYHGWEFDAEGICTRIPQAENPQLVTKNQKNLCAVSLPVRQENDLLWVWLDANSPQL 130
Query: 171 TIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
LP S GF + + V +L + L++N+ D +H PFTH + +
Sbjct: 131 ANDTPLPLSPQVDANKGF-VWSSYVRDLEYDWQTLVENVADPSHVPFTHHGVQGNREQAS 189
Query: 223 PSLVKFLTPASGLQGYWDP--YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
P +++ + + L + + F PPC + TI + GK G T
Sbjct: 190 PVILQIVKSTANLIEATSSGRFQTTITFEPPCRLEYTIRVGDEGKQLGLVT--------- 240
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRLVLGQ---- 334
C+P+ K+R++ + + +FA+ L + + W H +VL+ D+ L+ Q
Sbjct: 241 --YCIPTYPGKSRIVAQFTRNFATNLNRI--IPRWWSHIKIRNKVLDGDMILLHQQEHFL 296
Query: 335 QERMNNGA--NVWNLPVGYDKLGVRYRLWRDALEKG 368
QER + + + LP D+L + +R W D +G
Sbjct: 297 QERQSQESWKTAYQLPTSADRLIIEFRNWFDKYSQG 332
>gi|170698591|ref|ZP_02889660.1| Vanillate monooxygenase [Burkholderia ambifaria IOP40-10]
gi|170136525|gb|EDT04784.1| Vanillate monooxygenase [Burkholderia ambifaria IOP40-10]
Length = 373
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
+ P + N LKN W+ VA + D D + EP V +R DG +++ C HR
Sbjct: 7 TAPKETMNVFLKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRG 65
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 165
PL LG V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD
Sbjct: 66 APLSLGFVRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFIWVWPGD 125
Query: 166 EPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------- 212
+ P LP + H + + ++ L++DNL+DL H + H
Sbjct: 126 A--SEADPARLPALSWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKE 183
Query: 213 ----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPC 252
TS F + P + +GL D P+D F PP
Sbjct: 184 IDEAAPKTTANGDEVVTSRFMQNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPS 240
Query: 253 MVLSTIGISKPG 264
V+ +G++ G
Sbjct: 241 HVMIEVGVAHAG 252
>gi|145296350|ref|YP_001139171.1| hypothetical protein cgR_2265 [Corynebacterium glutamicum R]
gi|417971133|ref|ZP_12612061.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
gi|140846270|dbj|BAF55269.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044612|gb|EGV40288.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
Length = 376
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 149/368 (40%), Gaps = 46/368 (12%)
Query: 39 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 98
L ++L + + P+ N W+ A+ ++ + +P ++R KDG +
Sbjct: 3 LSERNLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 99 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 155
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 156 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPF 210
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 211 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 244
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 245 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPESDRSSHYFWAFMRNYR- 295
Query: 305 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
L+ L R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 296 -LESQTITTQL-RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 363 DALEKGAK 370
+AL K +
Sbjct: 353 EALSKEGR 360
>gi|260434502|ref|ZP_05788472.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
gi|260412376|gb|EEX05672.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
Length = 465
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 28/298 (9%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 118
W+P+++ DL + F E VI+ + V + C HR PL G +NE G
Sbjct: 40 WWPISYVQDLDPNQPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRINEEGL 99
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIK--SLPCFEQEGMIWIWPGDEPPTATI 172
++CPYHGW + G+C+++P +TQ N + + SLP +G++++W G P A
Sbjct: 100 LECPYHGWSFDGGGQCQRVPQALDNTQPNNRRSRCASLPTATGQGLLFVWMG--APDAAD 157
Query: 173 PCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 224
P LP P + + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 158 PSQLPLVPALEDNPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHRTVGKRKNAAP 216
Query: 225 LVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 282
+ +T ASG YW+ P R + + + P + T + + +
Sbjct: 217 VEASITGEDASGFTAYWEEGP-----RRGKLGAQSTTFNAPQLMWHDLTAKGFGRILTVV 271
Query: 283 VCLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNEDLRLVLGQQERM 338
+P R + RL R F S + + ++ W +H + ED ++ L QER+
Sbjct: 272 YAVPIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERV 329
>gi|418243964|ref|ZP_12870392.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
gi|354511995|gb|EHE84896.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
Length = 376
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 147/368 (39%), Gaps = 46/368 (12%)
Query: 39 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 98
L + L + + P+ N W+ A+ ++ + +P ++R KDG +
Sbjct: 3 LSERKLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 99 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 155
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 156 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPF 210
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 211 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 244
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 245 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPDSDRSSHYFWAFMRNYRQ 296
Query: 305 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
+ + R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 297 ESQTITTQL---RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 363 DALEKGAK 370
+AL K +
Sbjct: 353 EALSKEGR 360
>gi|298491713|ref|YP_003721890.1| pheophorbide a oxygenase ['Nostoc azollae' 0708]
gi|298233631|gb|ADI64767.1| Pheophorbide a oxygenase ['Nostoc azollae' 0708]
Length = 442
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 45/345 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+P++ DL VP VI++ +D V + C HR PL G V++ G
Sbjct: 11 WYPLSPVEDLDSPRPVPVTLLGIRLVIWKPRDADNYRVFLDQCPHRLAPLSEGRVDDKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 168
+ C YHGW++ G C +P + +N + SLP ++ ++W+WP +
Sbjct: 71 NLMCSYHGWQFDGRGICTHIPQAENPQLVAKNQQNFCVLSLPVRQENDLLWVWPDAKSAE 130
Query: 169 -TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 219
AT P L P GF + + + +L + L++N+ D +H PF+H K
Sbjct: 131 LAATTPLPLSPHIDTNKGF-VWSSYIRDLEYDWQTLVENVADPSHVPFSHHGVQGNRDKA 189
Query: 220 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
S+P V T P + F+PPC++ I I K G
Sbjct: 190 TSIPLNVVQSTINLIEVSISKALPTTITFQPPCLLEYAISIGDTDKKLG----------- 238
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRL------V 331
+ C+P S K+R++ + + +FA L ++ + W H + VL+ D+ L +
Sbjct: 239 LIVYCVPVSPGKSRIVAQFTRNFAKNLHYL--IPRWWEHIKIRNLVLDGDMMLLHQQEYL 296
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 376
L Q++ + + LP D+L + +R W D G QLP+ K
Sbjct: 297 LQQRQESESWKTAYKLPTSADRLVIEFRTWFDKYCHG--QLPWSK 339
>gi|326334247|ref|ZP_08200469.1| vanillate O-demethylase oxygenase subunit [Nocardioidaceae
bacterium Broad-1]
gi|325947942|gb|EGD40060.1| vanillate O-demethylase oxygenase subunit [Nocardioidaceae
bacterium Broad-1]
Length = 366
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 48/349 (13%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + P V++R +D P + + C HR PL +G V
Sbjct: 25 NAWYVAAWDREVTRKPSA-VQVADRPLVLYRTEDNRPVALADACWHRLAPLSMGEVIGDD 83
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
I+CPYHG Y+ G+C MP+ + N + S P E+ +W+W GD P A P L+
Sbjct: 84 IRCPYHGIVYNPAGRCVSMPAQESLNPSALVPSFPVVERHRFVWVWVGD--PLAANPDLI 141
Query: 177 PPS------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG----------- 219
P + E + EL + L++DNL+DL H F HTS+ G
Sbjct: 142 PDMHQMDDPAWAGDGETI-ELDCNYQLVMDNLMDLTHEEFLHTSSIGGGGLSESDFTVEH 200
Query: 220 ---------W-----SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
W +VP + + G G D + + +E+ P ++ +G++K G
Sbjct: 201 DGNKVRLSRWMIDIPAVPFMKAQMRAQHGYDGNVDRWQL-IEYGFPSVIRIDVGVAKTGT 259
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRL--LYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
+ R + ++ P S KT+ + + D S L Q + V
Sbjct: 260 GAPEGDRSQGINGFVMNAITPVSATKTKYHWAWMRNYDLQSQLLTSQIKQGI-----SNV 314
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 370
ED ++ QQ+ + N +NL + + +R R+ ALE +
Sbjct: 315 FKEDTAMLQAQQQAIESNPDYEFYNLNIDGGGMWIR-RILERALEAEGR 362
>gi|167645102|ref|YP_001682765.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167347532|gb|ABZ70267.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 350
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 45/315 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ + +++K + ++P + V+FR ++G C+++ C HR PL +G +
Sbjct: 10 NAWYAAGWDSEIKRE-LLPRTICNKKIVLFRKENGQAVCLEDACWHRLLPLSMGRLKGDD 68
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+QC YHG ++ G+C +MPS + N ++S P E+ +WIWPGD P P L+
Sbjct: 69 VQCGYHGLVFNEHGRCVRMPSQETINPSACVRSFPLVERHRFVWIWPGD--PALADPALV 126
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS- 224
P G IHA+ ++ L++DNL+DL H + H S+ +
Sbjct: 127 PDLHWNHDPAWAGDGKVIHAK------CDYRLIVDNLMDLTHETYIHGSSIGNDAVAEAP 180
Query: 225 ---------------LVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 265
++ P Q P +D + F PC V +G++ G
Sbjct: 181 FEVTTGDKTAMVTRWMIDIEPPPFWRQQLGKPGNVDRWQIIRFEAPCTVAIDVGVAPTGT 240
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ R + ++ P++ K + D+ + V R +V
Sbjct: 241 GAPRGDRSQGVSMVVINTITPATDKTCHYFWANVRDYQLGEQKVTTQI---REAITKVFA 297
Query: 326 EDLRLVLGQQERMNN 340
ED +V QQ +++
Sbjct: 298 EDEVIVEAQQRAIDD 312
>gi|115359337|ref|YP_776475.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284625|gb|ABI90141.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 373
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 104/245 (42%), Gaps = 40/245 (16%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N LKN W+ VA + D D + EP V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDDIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 172
V +G + C YHG E +GK MP ++ I+S P EQ G IW+WPGD +
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVEQYGFIWVWPGDA--SEAD 130
Query: 173 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------- 212
P LP + H + + ++ L++DNL+DL H + H
Sbjct: 131 PAKLPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAAPK 190
Query: 213 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIG 259
TS F + P + +GL D P+D F PP V+ +G
Sbjct: 191 TTANGDEVVTSRFMQNVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVG 247
Query: 260 ISKPG 264
++ G
Sbjct: 248 VAHAG 252
>gi|19553582|ref|NP_601584.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum ATCC 13032]
gi|62391226|ref|YP_226628.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 13032]
gi|21325154|dbj|BAB99776.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenases [Corynebacterium glutamicum ATCC 13032]
gi|41326566|emb|CAF21048.1| PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT [Corynebacterium
glutamicum ATCC 13032]
gi|385144481|emb|CCH25520.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum K051]
Length = 376
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 46/368 (12%)
Query: 39 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 98
L + L + + P+ N W+ A+ ++ + +P ++R KDG +
Sbjct: 3 LSERKLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 99 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 155
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 156 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPF 210
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 211 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 244
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 245 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPDSDRSSHYFWAFMRNYR- 295
Query: 305 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
L+ L R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 296 -LESQTITTQL-RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 363 DALEKGAK 370
+AL K +
Sbjct: 353 EALSKEGR 360
>gi|148555930|ref|YP_001263512.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501120|gb|ABQ69374.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 361
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ A S ++ ++ + P IFR G+ + + C HR PL G+V
Sbjct: 4 RNCWYVAAMSHEIAPGAVISRMICDVPMAIFRSLGGVASILLDRCPHRLYPLSEGTVEAH 63
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP-- 173
++C YHG ++ DG C ++PS N + + P E G+IW+WPGD A+ P
Sbjct: 64 GLRCAYHGLVFAGDGGCREIPSQSEIPANACVTAYPARESHGLIWVWPGDAALAASTPLP 123
Query: 174 ---------------CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
CL P S + + V+ L + L +DNLLDL H F H TF
Sbjct: 124 AFETGEGYLAGLDFSCLDPSSLWGVAGPHVIHLDANYMLAVDNLLDLTHTAFVHAKTF 181
>gi|432336210|ref|ZP_19587735.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
wratislaviensis IFP 2016]
gi|430776837|gb|ELB92235.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
wratislaviensis IFP 2016]
Length = 373
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 44/341 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N W+ A+ ++ ++ ++P ++R DG P + + C HR PL LG+ +
Sbjct: 19 NAWYVAAWDYEVTSAKLLARRIADKPMTLYRTTDGRPVALADACWHRLAPLSLGTRIGAD 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QCPYHG +++ G+C KMP+ + N + S P ++ +W+WPGD PT P
Sbjct: 79 EVQCPYHGLRFNSAGRCTKMPAQETINPSAMVASYPVEQRHRFLWVWPGD--PTLADPTT 136
Query: 176 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------GWSVP 223
+P F++ + +++ + L+LDNL+DL H F H+S+ + + V
Sbjct: 137 IPDM-FQMDSPEWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQEELSESDFVVT 195
Query: 224 SLVKFLTPAS--------------------GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+ +T + G +G D + I +EF+ P + +G++K
Sbjct: 196 HDERTVTVSRWMHNIDAPPFWLKNMRDKFPGFEGKVDRWQI-IEFQAPGTIRIDVGVAKA 254
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + R + ++ P K LY + L+ L R V
Sbjct: 255 GTGAPEGDRSQGVNGFVMNTITPVDEKTA--LYFWAFQRNYRLESQLITTQL-RDGVHGV 311
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
ED ++ QQ + N +NL + + VR + R
Sbjct: 312 FGEDEAMLTAQQAAIEANPDHEFYNLNIDAGGMWVRRIIQR 352
>gi|113477251|ref|YP_723312.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168299|gb|ABG52839.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 443
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 55/348 (15%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN------TCAHRACPLHLGSV 114
W+P++ DL + V VI++ P QN C HR PL G V
Sbjct: 11 WYPLSPVEDLDPEIPVSITLLGMGLVIWK-----PRYSQNYQVFLDVCPHRLAPLSEGRV 65
Query: 115 NE--GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPG 164
+E G + C YHGW+++++G C +P + +N + SLP ++ ++W+WP
Sbjct: 66 DEKTGNLMCSYHGWQFNSEGICTDIPQAENQEIIEKNRQNFCVTSLPVRQENDLLWVWPD 125
Query: 165 DEPP--TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+ A+ P L P GF + + V +L + L++N+ D +H PF+H
Sbjct: 126 RKTADLAASTPLPLSPQIDAEKGF-VWSSYVRDLEYDWETLVENVADPSHVPFSHHGVQG 184
Query: 218 -KGWSVPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
+ + P +++ L + P + F PPC + I I K GK G T
Sbjct: 185 NRNKARPIVMEILQSTINVIKVSISRGLPTIITFEPPCRLEYEISIGKDGKKIGLVT--- 241
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRL-- 330
CLP S K+R++ + +FA ++ + W H + VL+ D+ L
Sbjct: 242 --------YCLPVSPGKSRIVAQFPRNFAKIIHRL--TPRWWDHIQNRNLVLDGDMVLLN 291
Query: 331 ----VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
+L Q++ + + LP D+L + +R W D G QLP+
Sbjct: 292 QQEYLLQQKQSSKSWKTAYQLPTSADRLVIEFRNWFDKYSHG--QLPW 337
>gi|357438645|ref|XP_003589598.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
gi|355478646|gb|AES59849.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
Length = 231
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 59/76 (77%)
Query: 1 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNF 60
ME LVNDRLLQDR T+ +T + PSTS +S+ + + P+KSLNVSGPVQ Y+ LKNF
Sbjct: 153 MEELVNDRLLQDRSTAEVAETSSPPSTSNKSVHTERRRKPKKSLNVSGPVQSYHPNLKNF 212
Query: 61 WFPVAFSTDLKDDTMV 76
W+PVAFS DLKDD+MV
Sbjct: 213 WYPVAFSADLKDDSMV 228
>gi|220908310|ref|YP_002483621.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864921|gb|ACL45260.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 338
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK FW+PV L+D F +EP V++ ++G P Q+ C HR+ L +G V E
Sbjct: 10 LKRFWYPVLPIAQLQDGPKA-FTLLDEPLVLWLDQEGKPAATQDRCCHRSAKLSIGQVIE 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATI 172
G I+CPYHGWE+ G C ++P R + +I + PC E+ G +W+ EPP I
Sbjct: 69 GCIRCPYHGWEFDPQGACVRVPQHPDRPIPSGYRINAYPCQERYGYVWV--CLEPPVQDI 126
Query: 173 PCLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P + + + L++N LD+AH PF H TF
Sbjct: 127 PEFAEATDPNYRLIPGFWETWQCSSLRLMENTLDIAHIPFVHNQTFG 173
>gi|347528238|ref|YP_004834985.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136919|dbj|BAK66528.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 359
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ AF+ ++ D + ++ ++FR DG + + C HR PL G V
Sbjct: 5 LKNVWYAAAFADEISDKPLAR-TLLDQEIMLFRKGDGTAAMLADRCPHRFAPLSGGKVIG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
IQCPYHG ++ G+C P + L+ I + P E+ G++W WPG+ P
Sbjct: 64 DEIQCPYHGLRFNAQGECTHNPHVKGGGALKAANITAWPVMEKYGILWFWPGN--PDLAE 121
Query: 173 PCLLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
P LP P F + + ++ + + L++DNLLDL+HA + H +S L
Sbjct: 122 PSALPRVEFLERPDAFSV-VKGLLHVKGNYELVVDNLLDLSHASYIHPQFGGSAYSPEQL 180
Query: 226 VKFLT-----------------------PASGLQGYWDPYPI----DMEFRPPCMVLSTI 258
+ T P+ L GY P+ M + PP M+
Sbjct: 181 LAATTQKLERRENSIVNHRVRSGLAAPAPSQALFGYDAETPVYTKSTMTWYPPSML---- 236
Query: 259 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
G + H+ QLH P + + +
Sbjct: 237 -DFDAGSWAMDEAEEDGAHIPQLHFITPETEFTSHYFF 273
>gi|91789243|ref|YP_550195.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91698468|gb|ABE45297.1| vanillate demethylase subunit A [Polaromonas sp. JS666]
Length = 369
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 36/238 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ ++P ++ V+FR DG +++ C HR PL +G ++
Sbjct: 11 NAWYAAAYDVEVVR-ALLPRTICKQKLVMFRKTDGTVAALEDACWHRLLPLSMGRLDGDE 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG Y+ G+C MPS + N +++ P E+ +W+WPGD P P L+
Sbjct: 70 LTCGYHGLVYNAQGRCTHMPSQETLNPSACVRAYPVLEKHRFVWVWPGD--PAKADPALV 127
Query: 177 PPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + AE ++++ ++ L++DNL+DL H F H+S+ + G
Sbjct: 128 PDLHWNDDAEWAGDGKMIKVKCDYRLVVDNLMDLTHETFVHSSSIGQRAVAEAPFVATHG 187
Query: 220 WSVPSLVKFL-------------TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
++ +++ + G QG D + + ++F PC V +G+++ G
Sbjct: 188 DRTATVTRWMENIDAPPFWAGQINHSLGYQGPVDRWQV-IKFEAPCTVTIDVGVAEAG 244
>gi|428304409|ref|YP_007141234.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245944|gb|AFZ11724.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 468
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 142/344 (41%), Gaps = 36/344 (10%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAH 104
++G P K W+PV + DL F + VI+ K G + + C H
Sbjct: 16 LAGGNDPARFDCKEAWYPVFYIEDLDKSKPSKFTLLGQDLVIWWDKQGNSWRALADQCPH 75
Query: 105 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQE 156
R PL G + E G ++CPYHGW ++ +GKC+++P Q N + S P ++
Sbjct: 76 RLAPLSEGRIAEDGLLECPYHGWAFTGEGKCDRIPQQQAENKAHASQRACVASFPTVTRQ 135
Query: 157 GMIWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 209
G+++I+PG EP A +P + P P G+ I +LP + LL+N+LD +H P
Sbjct: 136 GLLFIYPG-EPENAFNVKVPIIEPIEESPDGW-ICLNTFRDLPYDALTLLENVLDASHVP 193
Query: 210 FTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 267
FTH + + L + G +G W+ P R + P +
Sbjct: 194 FTHHRSVGNRTNAAPVELEVVASDKQGFKGIWEEGP-----RKGTLGKQFTTFIAPALMW 248
Query: 268 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVL 324
T + + P + + R+ R F+S L + F++ + H + +
Sbjct: 249 HDLTSKQFGRTLTVVYATPIRKGECRIFARFPFKFSSKLPGL-FLKLTPRWYSHLGQNNV 307
Query: 325 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
ED ++ L QER N A + LP D R W
Sbjct: 308 LEDDQIFLHYQERYLAAKGGGANFAKAFYLPTRADTFVTALRKW 351
>gi|429335882|ref|ZP_19216495.1| vanillate O-demethylase oxygenase subunit [Pseudomonas putida
CSV86]
gi|428759451|gb|EKX81751.1| vanillate O-demethylase oxygenase subunit [Pseudomonas putida
CSV86]
Length = 350
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 133/331 (40%), Gaps = 33/331 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D + + E V +RG +++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIAEKPLGRKICNENMVFYRGDHSRVAALEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
++ C YHG E +DG+ MP +++ I+S P E+ G IW+WPGD TA IP
Sbjct: 63 KLVCGYHGLEMGSDGRTATMPCQRVQAFPAIRSFPVEERHGFIWVWPGDPARADTALIPN 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK------ 227
L S + + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 123 LHWADSPDWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVSGD 182
Query: 228 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 268
F A G D P+D F PP V+ +G++ G
Sbjct: 183 EVITSRFMENILPPPFWQAALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGTGGY 242
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
C + P S + M+ +F + P + R ++ EDL
Sbjct: 243 DAPAHCKAGSIVVDFITPESDTSIWYFWGMARNFKA---DDPALTETIRSGQGKIFAEDL 299
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ QQ + L + D GV+ R
Sbjct: 300 EMLERQQRNLLEHPQRSLLKLNIDAGGVQSR 330
>gi|271967869|ref|YP_003342065.1| vanillate demethylase oxygenase subunit [Streptosporangium roseum
DSM 43021]
gi|270511044|gb|ACZ89322.1| vanillate demethylase oxygenase subunit [Streptosporangium roseum
DSM 43021]
Length = 380
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 115
LKNFW+ V F + C + +VI+R +DG C+ + C HR L +G++
Sbjct: 2 LKNFWYAVEFGHAVGRRPR-KVTCLGQDFVIWRRRDGRIACLSDLCVHRGGALSMGTLAG 60
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD----- 165
+ I CPYHGWEY DG C K+P+ ++ + P E+ GM+W + GD
Sbjct: 61 DDSIACPYHGWEYGPDGGCVKIPANPPGRGIPSKARVDAYPVIERYGMVWAFLGDLPEEE 120
Query: 166 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
PP IP P+ ++ E ++ E L+N++D AH PF H + F
Sbjct: 121 RPPIPHIPQHEDPAFRAVYWETTVDANYER--TLENVVDAAHTPFVHGTAFGN 171
>gi|355643018|ref|ZP_09053027.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. 2_1_26]
gi|354830018|gb|EHF14077.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. 2_1_26]
Length = 351
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + PA+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPAT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|92112477|ref|YP_572405.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795567|gb|ABE57706.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 353
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 49/351 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++++ + C E+ V FR + G V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIEEKPLGRTICNEQ-IVFFRAEGGQVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
++ C YHG E DGKC MP ++R I + P E+ G IW+WPGD + IP
Sbjct: 63 QLVCGYHGLEMGCDGKCSSMPGQRVRGFPSIHAYPVVERHGFIWVWPGDAEQADPDQIPE 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L + E + + + ++ L++DNL+DL H + H S+ + ++ P +
Sbjct: 123 LHWANDPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQ-----PEIEEAAPET 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
+ G +W D P+D F PP +L +G++
Sbjct: 178 KVNGDEVLTIRHMENIPAPPFWQSALRGNNLADDVPVDRWQICRFTPPSHILIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-- 321
GK + P + + M+ +F P + L E
Sbjct: 238 GKGGYDAPADAKASSIVVDFITPETETSIWYFWGMARNFN------PQDEALTEQIREGQ 291
Query: 322 -QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 371
++ EDL ++ QQ + + L + D GV+ R D + K +
Sbjct: 292 GKIFAEDLEMLESQQRNLLRYPDRRLLMLNIDGGGVQARRVIDRILKAEAE 342
>gi|428220844|ref|YP_007105014.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427994184|gb|AFY72879.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 344
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 57 LKNFWFPV----AFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
LKNFW+ + + ST K T + D V++RG +G + C HR L G
Sbjct: 22 LKNFWYGIEHSASVSTKPKSITFMGHDL-----VLYRGSNGQAIALDGRCVHRGTDLGAG 76
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEP 167
V I CPYHGW+Y ++G C +P+ Q R K++S P E+ G+IW++ GD P
Sbjct: 77 WVEGDCIHCPYHGWKYESNGACSLIPANQPGVVIPRRAKLQSYPVQEKYGLIWLFWGDLP 136
Query: 168 PTA--TIPCL--LPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---- 218
P +IP L +G+ IH + E + ++ N +D+AHAPF H S F +
Sbjct: 137 PEECPSIPILPEFDQAGWRSIHGDFNWEG--HYSRVIANTIDMAHAPFVHASAFGRKDSP 194
Query: 219 ----------GWSVPSLVKFLT-PASGLQGYWDPYPIDMEFR 249
WS + F T PA L+ P D FR
Sbjct: 195 AVQAYKLESGAWSASGFITFETKPAYSLKFILGNDPPDGIFR 236
>gi|313109900|ref|ZP_07795830.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
39016]
gi|386063589|ref|YP_005978893.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|310882332|gb|EFQ40926.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
39016]
gi|348032148|dbj|BAK87508.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCGM2.S1]
Length = 351
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + PA+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPAT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDRALTESIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|171317347|ref|ZP_02906542.1| Vanillate monooxygenase [Burkholderia ambifaria MEX-5]
gi|171097488|gb|EDT42327.1| Vanillate monooxygenase [Burkholderia ambifaria MEX-5]
Length = 373
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 104/245 (42%), Gaps = 40/245 (16%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N LKN W+ VA + D D + EP V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 172
V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD +
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFIWVWPGDA--SEAD 130
Query: 173 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------- 212
P LP + H + + ++ L++DNL+DL H + H
Sbjct: 131 PARLPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPK 190
Query: 213 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIG 259
TS F + P + +GL D P+D F PP V+ +G
Sbjct: 191 TTANGDEVVTSRFMQNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVG 247
Query: 260 ISKPG 264
++ G
Sbjct: 248 VAHAG 252
>gi|452957702|gb|EME63065.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
ruber BKS 20-38]
Length = 371
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 143/345 (41%), Gaps = 52/345 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
+ W+ A+ ++ ++ P ++R +DG P + + C HR PL +G+ V
Sbjct: 19 DAWYVAAWDHEVGRREILARTIAGTPLALYRTEDGRPVALADACWHRLAPLSMGTLVGAD 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
IQCPYHG ++++ G+C MP+ Q N + S P E+ +W+WPGD P P
Sbjct: 79 GIQCPYHGLQFNSAGRCTHMPAQQTINPSAMVASYPVVERHRFVWVWPGD--PMLADPST 136
Query: 176 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS----- 224
+P F++ + +++ + L+LDNL+DL H F H+S+ + S
Sbjct: 137 IPDM-FQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQDELSESDFVVT 195
Query: 225 ---------------------LVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
L G +G D + I +EF+ P + +G++K
Sbjct: 196 HDDRTVTVTRWMHDIDAPPFWLKNMRDKFPGFEGKVDRWQI-IEFQAPSTIRIDVGVAKA 254
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL----WRHF 319
G + R + ++ P R +L F + +++ L R
Sbjct: 255 GTGAPEGDRSQGVNGFVMNTISPVDE-------RTALYFWAFMRNYRLDSQLITTQLREG 307
Query: 320 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
V ED ++ QQ+ + N G +NL + + VR + R
Sbjct: 308 VHGVFGEDEAMLTAQQKAIEANPGHEFYNLNIDAGGMWVRRIIQR 352
>gi|419962044|ref|ZP_14478041.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
opacus M213]
gi|414572580|gb|EKT83276.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
opacus M213]
Length = 373
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N W+ A+ ++ ++ ++P ++R DG P + + C HR PL LG+ +
Sbjct: 19 NAWYVAAWDYEVTSAKLLARRIADKPMTLYRTTDGRPVALADACWHRLAPLSLGTRIGAD 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPT----AT 171
+QCPYHG +++ G+C KMP+ + N + S P ++ +W+WPGD PT AT
Sbjct: 79 EVQCPYHGLRFNSAGRCTKMPAQETINPSAMVASYPVEQRHRFLWVWPGD--PTLADPAT 136
Query: 172 IPCLLPPSGFEIHAE-IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
IP + E + +++ + L+LDNL+DL H F H+S+ +
Sbjct: 137 IPDMFQMDSPEWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQ 184
>gi|206564276|ref|YP_002235039.1| vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
J2315]
gi|444357697|ref|ZP_21159217.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444370803|ref|ZP_21170432.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040316|emb|CAR56301.1| vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
J2315]
gi|443596789|gb|ELT65271.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443605882|gb|ELT73697.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
Length = 359
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRATDGQVAALEDFCPHRGAPLSLGVVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD P+ P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGD--PSEADPAK 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|393719683|ref|ZP_10339610.1| Rieske (2Fe-2S) protein [Sphingomonas echinoides ATCC 14820]
Length = 326
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
K+ W+ ST L+D V P V+FR DG + + C HR L LG+V++G
Sbjct: 15 KDAWYVGVASTQLRD-APVAITLQGAPIVLFRDADGQAQALHDRCPHRGVALSLGTVSDG 73
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 172
I C YHGW + G+C +PS + +++ ++ P EQ+G +W+W G DEP A +
Sbjct: 74 TIACAYHGWRFDGAGRCRHIPSLREDQTIKSAPVRRYPVAEQDGYVWLWTGTDEPEGAPL 133
Query: 173 PCLLPPSGFEIHA--EIVMELPIEHGLLLDNLLDLAHAPFTH 212
GF+ + MEL E L ++N LD+ HA FTH
Sbjct: 134 AI----DGFDRFQWLQGAMELACEAILPIENNLDICHAAFTH 171
>gi|259506673|ref|ZP_05749575.1| vanillate demethylase A [Corynebacterium efficiens YS-314]
gi|259165757|gb|EEW50311.1| vanillate demethylase A [Corynebacterium efficiens YS-314]
Length = 379
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 45/345 (13%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ ++ +P ++R +DG + + C HR PL G + GR
Sbjct: 25 NAWYVAAWDHEVTSKGIISRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 83
Query: 119 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 84 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVASFPVVEQYRYIWVWLGD--PTLADPT 141
Query: 175 LLPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK----------- 218
+P H E + + L+LDNL+DL H F H+S+ +
Sbjct: 142 TVPDMHQMTHPEWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHSSSIGQDELSEADFEVT 201
Query: 219 ----GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+V ++ + P G +G D + I + + P + +G++K
Sbjct: 202 HTEDSVTVSRWMRDIDPPPFWQKNMNDKFPGYEGKVDRWQI-IHYYYPSTICIDVGVAKA 260
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + R + + ++ P + + + + ++ + + R V
Sbjct: 261 GTGAPEGDRSQGVNGYVMNTITPETDRSSHYFWSFQRNYRLDSQ---LITTQLRDGVHGV 317
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALE 366
ED ++ QQE + N +NL + + VR R+ ALE
Sbjct: 318 FGEDEEMLTAQQEAIDANPDYEFYNLNIDAGGMWVR-RILEKALE 361
>gi|359462641|ref|ZP_09251204.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 458
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 153/344 (44%), Gaps = 50/344 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+PVA DL P + +VI++ KD V Q+ C HR PL G ++E G
Sbjct: 22 WYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSDQYLVFQDLCPHRLAPLSEGRIDEQTG 81
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK------IKSLPCFEQEGMIWIWPGDEPPTAT 171
++ C YHGW++ G C +P + + + S+P Q G++W+WP +P T
Sbjct: 82 QLMCSYHGWQFDQQGLCTHIPQAEAITPQQSQLYCVTSVPTQSQSGLLWVWP--DPDTQD 139
Query: 172 IPCL--LPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KGW 220
I LP S F + + ++ +L + L++N+ D +H PF H +
Sbjct: 140 IAATQPLPLSPFVNADQNFVWSSVMRDLAYDWQTLVENVSDPSHVPFAHHGVQGNRNQAA 199
Query: 221 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
+P V TP + ++ F+PPC V I GK T
Sbjct: 200 PIPMEVLTSTPELIEVQTTGKFSTNITFQPPCRVEYQFSIGD-GKQATMVT--------- 249
Query: 281 LHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAEQ--VLNEDLRLVLGQQE 336
C+P + ++R++ + +FA+ ++K +P W H + VL+ D+ L+ Q++
Sbjct: 250 --YCIPIAPGRSRIVALFARNFATGLMKVIP----RWVEHMKNRNPVLDGDMILLRSQEK 303
Query: 337 RM------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
++ + ++ LP D+L + YR W + G Q+P+
Sbjct: 304 QLLQHTQTQSWQTIYKLPTSADRLVIEYRRWFEKYSHG--QIPW 345
>gi|352094528|ref|ZP_08955699.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
gi|351680868|gb|EHA64000.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 130/312 (41%), Gaps = 52/312 (16%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNE-GR 118
W+PVA+ DL F E+ V++ G ++ C HR PL G +N G+
Sbjct: 9 WWPVAYVRDLDPTRPQRFTLLEQDLVLWWDAPGESWRAFKDVCPHRLVPLSEGRINSAGQ 68
Query: 119 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 167
++CPYHGW + G C +P ++ R SLP +G++++W G D
Sbjct: 69 LECPYHGWSFDGQGSCRAIPQLGARARSESRRTACGSLPTAIGQGLLFVWSGTPSAADSA 128
Query: 168 PTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
+P L + IV +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 ALPLVPVLQEQGDGWANGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAS 188
Query: 224 SLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--H 279
+ +T + G + +W P + GKL QNT A L H
Sbjct: 189 PVEAVITREDSQGFEAFWQEGP------------------RKGKLGSQNTHFRAPQLMWH 230
Query: 280 QLHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNE 326
L +P SR K RL R F S L V ++ W +H + E
Sbjct: 231 DLTAKGFARILTVVYAVPISRGKCRLFARFPFQFKSALPRVLVGLRPRWLQHIGNHKVLE 290
Query: 327 DLRLVLGQQERM 338
D ++ L QER+
Sbjct: 291 DDQVFLHWQERV 302
>gi|25027190|ref|NP_737244.1| vanillate O-demethylase oxygenase [Corynebacterium efficiens
YS-314]
gi|23492471|dbj|BAC17444.1| putative vanillate O-demethylase oxygenase subunit A
[Corynebacterium efficiens YS-314]
Length = 433
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 45/345 (13%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ ++ +P ++R +DG + + C HR PL G + GR
Sbjct: 79 NAWYVAAWDHEVTSKGIISRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 137
Query: 119 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 138 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVASFPVVEQYRYIWVWLGD--PTLADPT 195
Query: 175 LLPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK----------- 218
+P H E + + L+LDNL+DL H F H+S+ +
Sbjct: 196 TVPDMHQMTHPEWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHSSSIGQDELSEADFEVT 255
Query: 219 ----GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+V ++ + P G +G D + I + + P + +G++K
Sbjct: 256 HTEDSVTVSRWMRDIDPPPFWQKNMNDKFPGYEGKVDRWQI-IHYYYPSTICIDVGVAKA 314
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + R + + ++ P + + + + ++ + + R V
Sbjct: 315 GTGAPEGDRSQGVNGYVMNTITPETDRSSHYFWSFQRNYRLDSQ---LITTQLRDGVHGV 371
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALE 366
ED ++ QQE + N +NL + + VR R+ ALE
Sbjct: 372 FGEDEEMLTAQQEAIDANPDYEFYNLNIDAGGMWVR-RILEKALE 415
>gi|290956056|ref|YP_003487238.1| oxidoreductase subunit alpha [Streptomyces scabiei 87.22]
gi|260645582|emb|CBG68673.1| oxidoreductase alpha subunit [Streptomyces scabiei 87.22]
Length = 351
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 154/348 (44%), Gaps = 43/348 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A++ ++ + ++ EP V +R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYAEEVGRE-LLGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDG 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA---T 171
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P A T
Sbjct: 65 DRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD-PALADPQT 123
Query: 172 IP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------T 213
IP L P + ME + ++GLL+DNLLDL+H + H T
Sbjct: 124 IPRARHLAAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPIT 180
Query: 214 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
+ +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 181 TEVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYFAPCLYLLHSRIAPVG 239
Query: 265 KL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
L E + H + PSS K + +S D+A+ V ++L + V
Sbjct: 240 VLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESDEV--TEFLRGNNHTVV 297
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAK 370
+ + + L L Q+ + L + D G+ R+ +E+G K
Sbjct: 298 MQDVVALNLLQETLGSERTGYQELSINIDTGGLAARRILARLVEQGEK 345
>gi|148554468|ref|YP_001262050.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499658|gb|ABQ67912.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 359
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 15/168 (8%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T L+N W+ A+S++L D T+ +EP V+FRG+DG + + C HR PL LG +
Sbjct: 2 TFLRNAWYAAAWSSELADGTLAR-TFLDEPVVLFRGEDGKAVALADMCPHRFAPLSLGRI 60
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I+CPYHG + G C P + ++ ++S P E++ ++WIW GD A
Sbjct: 61 GGDTIRCPYHGLVFDKMGACVHNPHGRGVRPSSLSVRSYPVLERDSVLWIWMGD----AA 116
Query: 172 IPCLLPPSGFEIH-----AEI--VMELPIEHGLLLDNLLDLAHAPFTH 212
+ PP F A I ++ + + L+ DNL+DL+HA F H
Sbjct: 117 LAGATPPPSFAFLDKDGWATIRGMLGVGANYELVTDNLMDLSHAEFLH 164
>gi|427730536|ref|YP_007076773.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427366455|gb|AFY49176.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 53/347 (15%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+PV+ DL P VI++ K V + C HR PL G ++E G
Sbjct: 11 WYPVSPIEDLDPQKPTPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSEGRIDEQTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPPT 169
+ C YHGW++ G C ++P + N + +LP + ++W+W + P
Sbjct: 71 NLMCSYHGWQFDAQGTCTQIPQAENPELVTKNQNNFCVTTLPVRQANDLLWVWLDAQSPE 130
Query: 170 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 219
LP S GF + + V +L + L++N+ D +H PF H K
Sbjct: 131 LAAAQALPLSPQVDANKGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREKA 189
Query: 220 WSVP-SLVKF---LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 275
+P S+V+ L A G + + F PPC + I GK G T
Sbjct: 190 RPIPISIVQSTANLIEAVTTGG----FQTKITFEPPCRLEYAISFGDAGKQVGLIT---- 241
Query: 276 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLV-- 331
C+P + K+R++ + + +FA L F+ W H + VL+ D+ L+
Sbjct: 242 -------YCIPVAPGKSRIVAQFTRNFAKTLHR--FIPRWWDHITNRNAVLDGDMILLQQ 292
Query: 332 ----LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
L Q++ + + LP D+L + +R W D +G QLP+
Sbjct: 293 QEYFLQQKQLTESWKTAYQLPTSADRLVIEFRKWFDVYCRG--QLPW 337
>gi|255079488|ref|XP_002503324.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226518590|gb|ACO64582.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 903
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 149/359 (41%), Gaps = 44/359 (12%)
Query: 39 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGC 97
+P K+ + + + N W+PVAF L D + F EP V++R G+ C
Sbjct: 378 VPEKTEKNTEKIDDETPEILNQWWPVAFEHQLDADGDKLAVSLFGEPLVLYRTDGGVVNC 437
Query: 98 VQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFE 154
VQ+ CAH++CPL LG V +G++ C YHGW Y G+ +P+ Q + PC
Sbjct: 438 VQDRCAHKSCPLSLGYVRDGKLLCRYHGWAYGEGGELVDVPALQAGRCPKASVPKYPCHV 497
Query: 155 QEGMIWIWPGDEP-------PTATIPCLLPPSGFEIHA-EIVMELPIEHGL----LLDNL 202
+G++ +W G+ P ++ G E + + E G+ ++
Sbjct: 498 ADGVVHVWLGEAAECGRSQLPGHSLVATRSMKGVETLSWPRLTETREWDGVPWHSAVEIT 557
Query: 203 LDLAHAPFTHTSTFAKGWS--VPSLVKFLTPASGLQGYWDPY-------PIDMEFRPPCM 253
D H F H +T A V L +F T G+ Y + F PP
Sbjct: 558 QDFTHLQFVHPNTQAGRAPLLVGGLTEFETEGHPPGGFVAEYVGGSGKGGGRVTFVPPST 617
Query: 254 VLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 313
V++ +G+ A L + +P++ KT +L V H
Sbjct: 618 VMNESFFVDEEAPDGKK----AFPLCFVFRFVPTAPGKTAVL---------VQTHQKLFP 664
Query: 314 YLWRHFAEQVLN------EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 366
++ FA+ ++N +D ++ Q+ R+ G+ WNLP+ DK + + WR A E
Sbjct: 665 HISDRFAKALMNMTKVMSQDQLVLAAQRLRVAQGSPQWNLPIESDKHLLHFTKWRVAAE 723
>gi|81300845|ref|YP_401053.1| hypothetical protein Synpcc7942_2036 [Synechococcus elongatus PCC
7942]
gi|81169726|gb|ABB58066.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 334
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ +A STDL T + ++ V++R G + + C HR L G V
Sbjct: 9 LPNHWYAIAASTDLGS-TPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I CPYHGW++ DG C ++PS Q + K+ S P E+ G+IW++ GD A
Sbjct: 68 NAIACPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQ 127
Query: 172 IPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P P + +V + ++ + +N +D+AH+PF H ++F
Sbjct: 128 TPLWELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVHANSFG 176
>gi|148556298|ref|YP_001263880.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501488|gb|ABQ69742.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 348
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 115
++N W+ +S DL + EP V +R + G P + + C HR PL G +
Sbjct: 4 VRNCWYVALWSEDLHSGAIENRIILSEPVVFYRDQQGQPVALFDICPHRFAPLSKGRLLP 63
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT-ATI 172
G I C YHG E+ DG C + P ++K P EQ+ +IWIW GD+ P A I
Sbjct: 64 GGGIACGYHGLEFGADGTCIRNPHGDRIPNRAQVKRYPLVEQDSLIWIWMGDQTPDPALI 123
Query: 173 P---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P L P +G+ + + + +P ++ L++DNLLDL+H F H
Sbjct: 124 PRYDFLDPVNGYTVTSRETLTMPCDYRLIVDNLLDLSHINFLHDGILG 171
>gi|119513069|ref|ZP_01632124.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
gi|119462279|gb|EAW43261.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
Length = 354
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 57 LKNFWFPVAFSTDL--KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
LKNFW+ FS+ + K +V + +V++R G +++ C+HR L +G +
Sbjct: 2 LKNFWYACEFSSVVTKKPKQIV---MLNQRFVLYRNSQGQVVALKDQCSHRGAALSMGWL 58
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
+ I+CPYHGW++ +DGKC ++PS ++ + I S P E+ G IW++ G+ P +
Sbjct: 59 EDNCIRCPYHGWKFESDGKCVQIPSNEVGTPIPKKANITSYPIQEKYGFIWLFYGELPES 118
Query: 170 AT--IPCLLPPSGFEIHAEIV-MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
IP L +H + + + +L+N LDL+H P H +TF G+
Sbjct: 119 ERPPIPALPEFDDPNLHRSFLDFSVNTHYTRVLENALDLSHLPIVHANTFGAGF 172
>gi|121608344|ref|YP_996151.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552984|gb|ABM57133.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 352
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 38/346 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + C ++ V++R ++G + + C HR PL LG++ +
Sbjct: 10 NSWYVAAWDAEVGRKLLARTVC-DQDIVLYRKQNGAAVALADACWHRLLPLSLGTIVDDD 68
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHG + ++G+C MPS + N +++ P E+ +WIWPGD P P L+
Sbjct: 69 VRCGYHGLRFDSEGRCTHMPSQETINPSACVRAFPIVERHRFVWIWPGD--PALADPTLV 126
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + + E+ ++ L++DNL+DL H + H S+ G
Sbjct: 127 PDLRWMNDPAWTGDGRMTEVKADYRLVIDNLMDLTHETYVHGSSIGNEALAKAPFDAVHG 186
Query: 220 WSVPSLVKFLT-----PASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQN 270
+ ++ +++ P G Q P P+D + F+ P ++ +G++ G +
Sbjct: 187 ETTATIRRWVLNEDAPPFWGAQ-LGKPGPVDRWQIIHFKAPSTIVLDVGVAPAGSGAPEG 245
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R+ + +H+ PS+ K Y + H + A +L ED +
Sbjct: 246 HREAGVGMWVIHIPTPSTAKSC---YYFWCHLRNYRVHEQRVTREILQGAGGILLEDEIV 302
Query: 331 VLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
+ QQ + N + +N+ + L R RL +EK ++ P
Sbjct: 303 IEAQQRAIDKNPDRDFYNMNIDAGSLWAR-RLIDAMIEKETRRRPI 347
>gi|56752067|ref|YP_172768.1| hypothetical protein syc2058_d [Synechococcus elongatus PCC 6301]
gi|56687026|dbj|BAD80248.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 340
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ +A STDL T + ++ V++R G + + C HR L G V
Sbjct: 15 LPNHWYAIAASTDLGS-TPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKG 73
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I CPYHGW++ DG C ++PS Q + K+ S P E+ G+IW++ GD A
Sbjct: 74 NAIACPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQ 133
Query: 172 IPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P P + +V + ++ + +N +D+AH+PF H ++F
Sbjct: 134 TPLWELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVHANSFG 182
>gi|378716912|ref|YP_005281801.1| putative vanillate O-demethylase oxygenase subunit A [Gordonia
polyisoprenivorans VH2]
gi|375751615|gb|AFA72435.1| putative vanillate O-demethylase oxygenase subunit A [Gordonia
polyisoprenivorans VH2]
Length = 375
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 52/320 (16%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N W+ A+ ++ ++ +P ++R G P + + C HR PL +G +
Sbjct: 19 NAWYAAAWDHEVGSTQILSRTIAGKPLALYRTDSGRPVALADACWHRLAPLSMGKRIGAE 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
IQCPYHG +Y+ G+C +MP+ + N + S P E+ +W+WPGD PT P
Sbjct: 79 EIQCPYHGLQYNAAGRCTRMPAQKTINPSAMVASYPIEERHRYLWVWPGD--PTLADPST 136
Query: 176 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
+P F++ + + +++ + L++DNL+DL H F H+S+ G S +F+
Sbjct: 137 IPDM-FQMDSPEWAGDGLTIDVRANYQLVVDNLMDLTHEEFVHSSSI--GQDELSESEFI 193
Query: 230 T------------------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGISK 262
T P L+ D +P +D +EF+ P + +G++K
Sbjct: 194 TTHDENTVTVTRWMHNIDAPPFWLKNMRDKFPGFTGKVDRWQIIEFQAPGTIRIDVGVAK 253
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL----WRH 318
G + R + ++ P R ++ F + +++ L R
Sbjct: 254 AGTGAPEGDRSQGVNGFVMNTISPVDE-------RTAIYFWAFMRNYRLDSQLITTQLRD 306
Query: 319 FAEQVLNEDLRLVLGQQERM 338
V ED ++ QQE +
Sbjct: 307 GVHGVFGEDEEMLTAQQEAI 326
>gi|344174888|emb|CCA87514.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
syzygii R24]
Length = 342
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PGQADPAL 119
Query: 176 LPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ P S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 IHPLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|423095040|ref|ZP_17082836.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886387|gb|EJL02870.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 346
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ ++ +L + ++ E P V FR G+ + + C HR PLH+G V
Sbjct: 4 LLNTWYIAGWADELAQEALLGRTIVERPVVFFRDSQGVIQAIDDRCPHRFAPLHMGKVVG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
IQCPYHG + GKC P T + ++ P E+ G IW+W GD P
Sbjct: 64 DSIQCPYHGLRFDGAGKCTHNPHGEGTIPKAACVRGYPVVERHGAIWVWLGD--PALASD 121
Query: 174 CLLPPSGF----EIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAKG 219
L+P F HA+ LP + LL DN++DL+H F H T G
Sbjct: 122 ALIPDFSFFEQAPTHAKGKGYLPTRAHYELLSDNIMDLSHVDFLHPDTLGGG 173
>gi|89899097|ref|YP_521568.1| Rieske (2Fe-2S) protein [Rhodoferax ferrireducens T118]
gi|89343834|gb|ABD68037.1| Rieske (2Fe-2S) protein [Rhodoferax ferrireducens T118]
Length = 351
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 138/336 (41%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A ++ + + C E +RG++ V++ C HR PL LG V+EG
Sbjct: 4 KNTWYVAATPNEIDEKPLGRTICGER-IAFYRGEENKVAAVEDFCPHRGAPLSLGYVSEG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
++ C YHG E GK MP ++R IK+ P E+ G IW+WPGD + A IP
Sbjct: 63 KLVCGYHGLEMGCQGKTIAMPGQRVRGFPAIKAYPVVERYGFIWVWPGDAAQADEAKIPH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
+ E + + + ++ L++DNL+DL H + H
Sbjct: 123 MAWYDNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDETPCKTTVEGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F G P + A+ L D P+D F PP V+ +G++ G
Sbjct: 183 TVVTSRFMSGIQPPPFWQMALRANHLA---DDVPVDRWQICRFTPPSHVMIEVGVAHQGH 239
Query: 266 --LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
+ N ++ + + + P + + M+ F K + R ++
Sbjct: 240 GGYDAPNDKKAYSVV--VDFITPETETSIHYFWGMARKFNPADKA---LTASIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FGEDLEMLERQQQNLLAHPERALLMLNIDAGGVQSR 330
>gi|87199889|ref|YP_497146.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135570|gb|ABD26312.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 137/340 (40%), Gaps = 41/340 (12%)
Query: 50 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
+P T L+N W+ +++DL + EEP +FR G + C HR PL
Sbjct: 12 AKPAATYLRNTWYVAGWASDLAGEPQQR-TFLEEPVALFRDGHGEAKAIGGRCPHRFAPL 70
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEP 167
GSV +G + CPYHG + DG+C P L + + + P E+ ++WIW GD
Sbjct: 71 GHGSVVDGALMCPYHGLRFDGDGRCVHNPHPGGHLPDARQRVYPLVERHALLWIWMGDAA 130
Query: 168 PT--ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----TSTFAK 218
A+IP L P + V E E L DN+LDL+HA F H S F +
Sbjct: 131 KADPASIPDFSWLSDPRWEAVRGATVAEGHFE--LYSDNILDLSHANFVHPALVASAFTE 188
Query: 219 G----WS-----VPSLVKF-------LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 262
G W V+ ++ G +G + +++ P ++ +
Sbjct: 189 GERKFWQDGDNVFAEYVRLNDELSVGISAVMGTEGRPQDFYGMVKWHAPAVLYFDFRAGE 248
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PG R+ T L LH P + T + + D+ L F + R E
Sbjct: 249 PG-----TPREQCTLLPSLHAFTPETPDTTHYFWATARDYR--LGDAEFTAGM-RAALEF 300
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLP---VGYDKLGVRYR 359
++ ++ R+ G + W L +G D GVR R
Sbjct: 301 AFEQEDMPIIRDSHRLMRGEDFWALRPLILGGDGGGVRAR 340
>gi|399021375|ref|ZP_10723485.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398092183|gb|EJL82601.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 350
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 39/334 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKI-VFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
++ C YHG E DGK MP ++R I+S P E+ G IW+WPG++ A I
Sbjct: 63 QLVCGYHGLEMGCDGKVISMPGQRVRGFPCIRSFPVVERYGFIWVWPGEKELADPAQIHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
L E + + + E+ L++DNL+DL H + H
Sbjct: 123 LEWADNPEWAYGGGLYHINCEYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRTEGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F + P + ++GL D P+D F PP V+ +G++ GK
Sbjct: 183 EVITSRFMENIMAPPFWRMALRSNGLA---DDVPVDRWQVCHFTPPSHVMIEVGVAHAGK 239
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
Q + P + + M+ +F S + R ++
Sbjct: 240 GGYDADPQYKASSIVVDFITPETETSHWYFWGMARNFKSQDAE---LTAAIREGQGKIFG 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
ED ++ QQ+ + L + D GV+ R
Sbjct: 297 EDRDMLEMQQQNILKHPERKLLMLNIDAGGVQSR 330
>gi|296391741|ref|ZP_06881216.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PAb1]
gi|416874050|ref|ZP_11917881.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
152504]
gi|334843898|gb|EGM22480.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
152504]
Length = 351
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGTEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|386061075|ref|YP_005977597.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
M18]
gi|347307381|gb|AEO77495.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
M18]
Length = 351
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 134/331 (40%), Gaps = 33/331 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVPS------ 224
L S + + + ++ L++DNL+DL H + H S+ + + P+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPTTRVDGD 182
Query: 225 -------LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 268
+ + P A G D +D F PP VL +G++ G
Sbjct: 183 EVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAGHGGY 242
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
Q + + P S + M+ +F + H + R ++ EDL
Sbjct: 243 QAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIFGEDL 299
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ QQ + L + D GV+ R
Sbjct: 300 EMLESQQRNLLRHPRRDMLKLNIDAGGVQAR 330
>gi|421182982|ref|ZP_15640450.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
E2]
gi|404541080|gb|EKA50455.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
E2]
Length = 351
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGRI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|116053053|ref|YP_793372.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218893999|ref|YP_002442868.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
LESB58]
gi|254238378|ref|ZP_04931701.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
C3719]
gi|392986580|ref|YP_006485167.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
DK2]
gi|416856399|ref|ZP_11912016.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
138244]
gi|420142098|ref|ZP_14649727.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CIG1]
gi|421156423|ref|ZP_15615870.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|421163497|ref|ZP_15622207.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|421170716|ref|ZP_15628644.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|421177160|ref|ZP_15634816.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CI27]
gi|451986046|ref|ZP_21934240.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas aeruginosa 18A]
gi|115588274|gb|ABJ14289.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170309|gb|EAZ55820.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
C3719]
gi|218774227|emb|CAW30044.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
LESB58]
gi|334841960|gb|EGM20577.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
138244]
gi|392322085|gb|AFM67465.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
DK2]
gi|403245161|gb|EJY58988.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CIG1]
gi|404519067|gb|EKA29852.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|404522544|gb|EKA33037.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|404528514|gb|EKA38597.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|404529804|gb|EKA39824.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CI27]
gi|451756295|emb|CCQ86763.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas aeruginosa 18A]
gi|453046414|gb|EME94130.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 351
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|172064135|ref|YP_001811786.1| vanillate monooxygenase [Burkholderia ambifaria MC40-6]
gi|171996652|gb|ACB67570.1| Vanillate monooxygenase [Burkholderia ambifaria MC40-6]
Length = 359
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + EP V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKATGMPGQRVGGFPPIRSFPVVERYGFIWVWPGDA--SEADPAR 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 212
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTTA 179
Query: 213 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 262
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 NGDEVVTSRFMQNVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 263 PG 264
G
Sbjct: 237 AG 238
>gi|121605619|ref|YP_982948.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594588|gb|ABM38027.1| Rieske (2Fe-2S) domain protein [Polaromonas naphthalenivorans CJ2]
Length = 354
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ D+ D + C E V +R ++G +++ C HR PL LG V+EG
Sbjct: 4 KNTWYVACTPQDIDDKPLGRKICGERI-VFYRAQEGRVAALEDFCPHRGAPLSLGFVSEG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD P +
Sbjct: 63 KLVCGYHGLEMGCDGKTIAMPGQRVRGFPQIRSYPVEERYGFIWVWPGDA--AQADPAKI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 212
P + + E + + ++ L++DNL+DL H + H
Sbjct: 121 PHQDWYENPEWAYGGGMFHIHCDYRLMIDNLMDLTHETYVHSGSIGQKEIDEVPCKTTVN 180
Query: 213 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 263
TS F + P K + L D P+D F PP V+ +G++
Sbjct: 181 GDEVVTSRFMENIMPPPFWKLALRGNNLA---DDVPVDRWQICRFTPPSHVMIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + + P + + M+ F K + R ++
Sbjct: 238 GMGGYDAPPDHKAYSIVVDFITPETETSIWYFWGMARKFNPRDKA---LTATIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+EDL ++ QQ+ + + L + D GV+ R
Sbjct: 295 FSEDLEMLQRQQQNLLDYPERALLKLNIDAGGVQSR 330
>gi|49086646|gb|AAT51369.1| PA4904, partial [synthetic construct]
Length = 352
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADDALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|395775049|ref|ZP_10455564.1| oxidoreductase subunit alpha [Streptomyces acidiscabies 84-104]
Length = 354
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 45/349 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ +A+S ++ + ++ EP V++R + DG P + + C HR PL ++
Sbjct: 9 RNQWYVMAYSHEVGRE-LLGRTVLGEPIVVYRTEADGTPVALHDRCVHRRYPLSASGLDG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
RI C YHG+ Y T G C +P + R ++ + P EQ+ +IW+W GD P P
Sbjct: 68 DRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVAAYPVVEQDSLIWVWIGD--PALADPA 125
Query: 175 LLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH-------------- 212
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 AIPRARHLDAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPI 182
Query: 213 TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 183 TTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPV 241
Query: 264 GKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G E + H + PS K + +S D+A+ + V ++L +
Sbjct: 242 GVAPEADGSDPHGFHTEITYAITPSGDGKVYDFWMVSRDWATDDEEV--TEFLRGNNHTV 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAK 370
V+ + L L Q+ + L + D G+ R+ +E+GAK
Sbjct: 300 VMQDVDALNLLQRTLGSERDGYQELSINIDTGGLAARRILARLVEEGAK 348
>gi|15600097|ref|NP_253591.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO1]
gi|418583022|ref|ZP_13147093.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592188|ref|ZP_13156064.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P2]
gi|421519468|ref|ZP_15966139.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO579]
gi|9951180|gb|AAG08289.1|AE004903_7 vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PAO1]
gi|375047629|gb|EHS40172.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P1]
gi|375049014|gb|EHS41525.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P2]
gi|404345387|gb|EJZ71739.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO579]
Length = 351
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADDALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|397694476|ref|YP_006532357.1| rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
DOT-T1E]
gi|397331206|gb|AFO47565.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
DOT-T1E]
Length = 355
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P S + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|398805739|ref|ZP_10564702.1| ring-hydroxylating dioxygenase, large terminal subunit [Polaromonas
sp. CF318]
gi|398090554|gb|EJL81023.1| ring-hydroxylating dioxygenase, large terminal subunit [Polaromonas
sp. CF318]
Length = 364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 36/238 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + C ++ V+FR DG +++ C HR PL +GS++
Sbjct: 11 NAWYAAAYDVEVGRKLLARTIC-KQKLVMFRRTDGQVAALEDACWHRLLPLSMGSLDGDE 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG Y+ G+C MPS + N +++ P E+ +WIWPGD P P L+
Sbjct: 70 VTCGYHGLVYNAQGRCTHMPSQETLNPSACVRAFPVLEKHRFVWIWPGD--PAKADPALV 127
Query: 177 PPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + + ++ + ++ L++DNL+DL H F H S+ + G
Sbjct: 128 PDMHWNDDPDWAGDGKLITVKCDYRLVVDNLMDLTHETFVHGSSIGQRAVAEAPFVATHG 187
Query: 220 WSVPSLVKFLTP-------------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
++ +++ A G +G D + I ++F PC V +G+++ G
Sbjct: 188 DRTATVTRWMENIDAPPFWAGQIEHARGYKGKVDRWQI-IKFEAPCTVNIDVGVAEAG 244
>gi|334140725|ref|YP_004533927.1| vanillate monooxygenase [Novosphingobium sp. PP1Y]
gi|333938751|emb|CCA92109.1| vanillate monooxygenase [Novosphingobium sp. PP1Y]
Length = 354
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A+ ++ ++ M+ ++ W+I R DG + + C HR PL G +
Sbjct: 14 VRNLWYMAAWDDEIPENGMLSRTLLDDKWLIARLSDGSYAMLADRCPHRFVPLSKGKLEA 73
Query: 117 GRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I CPYHG + G C P+ +V+ +++P + +W WPGD P P
Sbjct: 74 DVIHCPYHGLGFDRTGACVHNPFPAEPPAHVRARTMPVVHRHHGLWFWPGD--PQKADPA 131
Query: 175 LLPPSGFEIHAEIVMELPIEHG---LLLDNLLDLAHAPFTHTSTFAKGWSV 222
L+P GF A + + G LL DNL+DL HA F H ++F S+
Sbjct: 132 LIPDFGFVERAGMSRSRLVIKGHYELLTDNLMDLTHAEFLHVTSFGVNGSI 182
>gi|78061272|ref|YP_371180.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969157|gb|ABB10536.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 373
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N LKN W+ VA + D D + E V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VAGTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 172
V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD +A
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPAVERYGFIWVWPGDA--SAAD 130
Query: 173 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P LP + H + + ++ L++DNL+DL H + H ++ +
Sbjct: 131 PAKLPVLAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQ 181
>gi|152985552|ref|YP_001350949.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA7]
gi|150960710|gb|ABR82735.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA7]
Length = 351
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG++G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELVGKPLGRRIC-DEPMVFYRGEEGRVVALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPGD IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRSMPGQRVRGFPCIRHFPVVERHGFVWVWPGDAGHADATLIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P++
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPST 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D P+D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMENVMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + Q + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYRAPAQRKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTASIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|456386742|gb|EMF52278.1| oxidoreductase subunit alpha [Streptomyces bottropensis ATCC 25435]
Length = 351
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 153/348 (43%), Gaps = 43/348 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A++ ++ + ++ EP V +R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYAEEVGRE-LLGRTVLGEPLVFYRTEEEGTPVALHDRCVHRRYPLSESGLDG 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA---T 171
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P A T
Sbjct: 65 DRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD-PALADPQT 123
Query: 172 IP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------T 213
IP L P + ME + ++GLL+DNLLDL+H + H T
Sbjct: 124 IPRARHLAAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPIT 180
Query: 214 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
+ +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 181 TEVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYFAPCLYLLHSRIAPVG 239
Query: 265 KL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
L E + H + PSS K + +S D+A+ + V +L + V
Sbjct: 240 VLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESEEV--TGFLRGNNHTVV 297
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAK 370
+ + + L L Q+ L + D G+ R+ +E+G K
Sbjct: 298 MQDVVALNLLQETLGTERTGYQELSINIDTGGLAARRILARLVEQGEK 345
>gi|218439150|ref|YP_002377479.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218171878|gb|ACK70611.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 474
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 23/299 (7%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE 116
+ W+P+ + DL PF + VI+ K+ + + C HR L G +NE
Sbjct: 37 QEVWYPIHYVKDLDKTKPTPFTLLDRKLVIWWDKNASVWRVFDDKCPHRLALLSEGRINE 96
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G I+CPYHGW +S GKCE +P + + + + SLP +G+++ +PG +
Sbjct: 97 QGLIECPYHGWTFSGSGKCEFIPQQREGTNAEESKRACVTSLPTTVCQGLLFTYPGNPEN 156
Query: 167 PPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P +P L SG + + +LP + LL+N+LD +H PFTH T + +
Sbjct: 157 APKVKVPIIESLEDNSGEWVCIDTFRDLPYDALTLLENVLDASHVPFTHHGTVGNRNNAA 216
Query: 223 PSLVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + G G W+ P T+ I+ ++Q L +
Sbjct: 217 PVELELVKSGRQGFTGIWEEGPRKGTLGKQ----DTLFIAPNFMTHDLTSKQFGRTLTVV 272
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM 338
+ P S+ K RL R F+S L + + H + + ED ++ L QER
Sbjct: 273 YAT-PISKGKCRLFARFPFQFSSKLPKFFINLTPRWYSHTNQNTILEDDQIFLHYQERF 330
>gi|107104003|ref|ZP_01367921.1| hypothetical protein PaerPA_01005076 [Pseudomonas aeruginosa PACS2]
Length = 351
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 134/331 (40%), Gaps = 33/331 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVPS------ 224
L S + + + ++ L++DNL+DL H + H S+ + + P+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPTTRVDGD 182
Query: 225 -------LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 268
+ + P A G D +D F PP VL +G++ G
Sbjct: 183 EVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAGHGGY 242
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
Q + + P S + M+ +F + H + R ++ EDL
Sbjct: 243 QAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIFGEDL 299
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ QQ + L + D GV+ R
Sbjct: 300 EMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|148547249|ref|YP_001267351.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida F1]
gi|395448724|ref|YP_006388977.1| Rieske domain-containing protein [Pseudomonas putida ND6]
gi|148511307|gb|ABQ78167.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida F1]
gi|388562721|gb|AFK71862.1| Rieske domain-containing protein [Pseudomonas putida ND6]
Length = 355
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P S + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAYPERNLLKLNIDAGGVQSR 330
>gi|424944304|ref|ZP_18360067.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCMG1179]
gi|346060750|dbj|GAA20633.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCMG1179]
Length = 402
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 55 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 113
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 114 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 173
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 174 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 228
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D +D F PP VL +G++
Sbjct: 229 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 288
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q + + P S + M+ +F + H + R ++
Sbjct: 289 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 345
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ + L + D GV+ R
Sbjct: 346 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 381
>gi|171058019|ref|YP_001790368.1| Rieske (2Fe-2S) domain-containing protein [Leptothrix cholodnii
SP-6]
gi|170775464|gb|ACB33603.1| Rieske (2Fe-2S) domain protein [Leptothrix cholodnii SP-6]
Length = 351
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 130/336 (38%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ + D + C EP V +R G +++ C HR PL LG V EG
Sbjct: 4 RNAWYVACTPDEFADKPLGRTIC-GEPLVFYRDGSGAVAALEDFCPHRGAPLSLGRVCEG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
R+ C YHG E DGK MP ++R I+S P E+ G +W+WPGD LL
Sbjct: 63 RLVCGYHGLEMGCDGKTIAMPGQRVRGFPAIRSFPVIERHGFVWVWPGDA--ARADAALL 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 212
P + H E + + ++ L++DNL+DL H + H
Sbjct: 121 PALPWADHPEWAYGGGLYNIGCDYRLMIDNLMDLTHETYVHATSIGQKEIDEVPCSTRVD 180
Query: 213 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 263
TS F G P K +GL D P+D F PP VL +G++
Sbjct: 181 GDEVITSRFMNGIEAPPFWKMALRMNGLP---DDQPVDRWQICHFTPPSHVLIEVGVALA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + + P + + M+ F H P + R ++
Sbjct: 238 GHGGHAAPAEVKASSIVVDFITPETDGSIWYFWGMARHFK---PHDPSLTTQIRDGQGRI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
ED ++ QQ + + L + D GV+ R
Sbjct: 295 FAEDREMLERQQANLTRWPDRKLLALNIDSGGVQAR 330
>gi|389577642|ref|ZP_10167670.1| ring-hydroxylating dioxygenase, large terminal subunit [Eubacterium
cellulosolvens 6]
gi|389313127|gb|EIM58060.1| ring-hydroxylating dioxygenase, large terminal subunit [Eubacterium
cellulosolvens 6]
Length = 323
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+ + S LK +V F E VIFR +G GCV + CAHR L G + +
Sbjct: 2 INNQWYAILSSHKLKRGKVVGVRRFGENLVIFRTDNGQIGCVNSLCAHRKASLAKGCIQD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
++CP+HG EY GKC +PS ++K+ P E G+I++W GD+ P
Sbjct: 62 DHVKCPFHGIEYDVSGKCVYVPSEGRASTQDYTRFRMKNYPTKEIGGIIFVWYGDKEPEG 121
Query: 171 --TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+ ++ S + + I +++ +++N LD++H F H +T +G
Sbjct: 122 EPDVFDVITDSSYA-YDHIEDTWNVDYSRVIENQLDVSHLAFVHHNTIGRG 171
>gi|421520559|ref|ZP_15967223.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
gi|402755621|gb|EJX16091.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
Length = 355
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENLMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P S + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAYPERNLLKLNIDAGGVQSR 330
>gi|167033176|ref|YP_001668407.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida GB-1]
gi|166859664|gb|ABY98071.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida GB-1]
Length = 355
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG + V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRRICGEKI-VFYRGHENRVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G +W+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFVWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------------ 219
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 220 ----WSVPSLVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
+ + + P A G D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P + + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAEAQHKASSIVVDFITPETDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|387903877|ref|YP_006334215.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Burkholderia sp. KJ006]
gi|387578769|gb|AFJ87484.1| Putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia sp. KJ006]
Length = 372
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
+ P + N LKN W+ VA + D D + E V +R DG +++ C HR
Sbjct: 6 TAPKETTNVFLKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGRVAALEDFCPHRG 64
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 165
PL LG V +G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD
Sbjct: 65 APLSLGFVRDGVLVCGYHGLEMGCNGKTAAMPGQRVGGFPAIRSFPVVERYGFVWVWPGD 124
Query: 166 EPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ P LP + H + + ++ L++DNL+DL H + H ++ +
Sbjct: 125 A--SRADPAALPALTWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQ 180
>gi|220906614|ref|YP_002481925.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219863225|gb|ACL43564.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 358
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKNFW+ V FS +K +V++R G + N CAHR L G V +
Sbjct: 2 LKNFWYAVEFSHAVKHQPK-QVTLMGRQYVLYRNSQGQVIALNNQCAHRGAALAGGWVED 60
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA- 170
++CPYHGW+Y+TDG C +P+ Q + ++ + P E+ G IW++ GD+P
Sbjct: 61 NCLRCPYHGWKYATDGACVDIPANQPGVPIPKRARVDAYPVEEKSGFIWMYMGDQPAAER 120
Query: 171 -TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
++P LLP P +H E + + ++++ LD+ HA F H F
Sbjct: 121 PSVPDLLPELHDPHWRSVHGEYTWD--CHYTRVIESNLDVTHAAFVHPPFFG 170
>gi|386011602|ref|YP_005929879.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
gi|313498308|gb|ADR59674.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
Length = 355
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P S + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAYPERNLLKLNIDAGGVQSR 330
>gi|300868863|ref|ZP_07113469.1| Iron-sulfur cluster-binding protein, Rieske family [Oscillatoria
sp. PCC 6506]
gi|300333080|emb|CBN58661.1| Iron-sulfur cluster-binding protein, Rieske family [Oscillatoria
sp. PCC 6506]
Length = 337
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
K FW+PV T+L D VPF+ +P V++ +G P V++ C HR L LG V
Sbjct: 9 FKRFWYPVIPMTELSDRP-VPFELLSQPIVLWLTAEGKPAAVEDKCCHRTAKLSLGKVVN 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
G I C YHGW ++ G+C +P T + K+K+ PC E+ G W+ G+ P I
Sbjct: 68 GNICCAYHGWTFNPCGECVHVPQISEGTISSSYKVKAYPCVERYGYAWVCLGE--PLIDI 125
Query: 173 PCL---LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P + P +IH E +++N LD+AH F HT+TF
Sbjct: 126 PNITEAFDPDYRQIH-EFYETWNCAGLRVMENELDMAHPTFVHTTTFG 172
>gi|288961898|ref|YP_003452208.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288914178|dbj|BAI75664.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 357
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 153/359 (42%), Gaps = 63/359 (17%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A+ ++ D + + P V+FR G + + C HR PL LG+V
Sbjct: 4 LMNSWYVAAWDHEVTADRPLARTLLDRPVVLFRDAAGTARALFDRCPHRFAPLSLGTVQG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTAT 171
++C YHG E+ G C + P T + K+++ P E+ +IWIW GD + A
Sbjct: 64 DSLRCAYHGLEFDGRGACTRNPHGNGTIPKAAKVEAFPLVERHSLIWIWMGDPAKADPAA 123
Query: 172 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 219
IP CL P S + + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFGCLDPES--QHVGKRYLRVNANYMLENDNIMDLSHIQFLHASTLGSDAVAQAVTEV 181
Query: 220 -------WSVPS-----LVKFLTPASGLQ-GYWDPYPIDMEFRPPCMVLSTIGISKPG-- 264
WS+ + + FL A G++ G ID+ + P ++ G G
Sbjct: 182 KEEGNTVWSLRTTHGEIMPDFLYQAMGIEPGIPVDRWIDVRWNAPANMVLLAGAVPSGRP 241
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ EG++T C H+ P + T Y S+ F + PF L AE+ +
Sbjct: 242 RAEGRDTPTC-------HLFTPETATTTH--YWFSISFPKAMG--PFGAQL----AEEQI 286
Query: 325 N--------EDLRLVLGQQERMNNGANVWNLP----VGYDKLGVRYRLWRDALEKGAKQ 371
+ EDL ++ QQ+ M + A W+L VG D GVR R D L +Q
Sbjct: 287 DGLSVPFRTEDLPMLEAQQKAMGD-AEFWSLKPVLLVG-DAAGVRARRVLDRLIAAEQQ 343
>gi|410684123|ref|YP_006060130.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CMR15]
gi|299068612|emb|CBJ39846.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CMR15]
Length = 342
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGTVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PEQADPAL 119
Query: 176 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 218
+ S + + + + L++DNL+DL H + H ++ +
Sbjct: 120 IHHLEWAESEAWAYGGGLYHIQCGYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTKV 179
Query: 219 -GWSVPS--LVKFLTP----ASGLQ--GYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
G +V + ++ + P A+ L+ G D P D F PP VL +G++ GK
Sbjct: 180 EGDAVVTSRFMENIMPPPFWATALRGAGLADDVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|26990443|ref|NP_745868.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
KT2440]
gi|24985413|gb|AAN69332.1|AE016570_9 vanillate demethylase A [Pseudomonas putida KT2440]
Length = 355
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 136/333 (40%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
P + + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVSDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P S + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|429197812|ref|ZP_19189686.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
gi|428666507|gb|EKX65656.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
Length = 354
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A++ ++ + ++ EP V +R ++ G P + + C HR PL ++
Sbjct: 9 RNQWYVAAYAHEVGRE-LLGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPPTA 170
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD +P T
Sbjct: 68 DRIVCGYHGFTYDTTGTCVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGDPALADPQTI 127
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TSTF 216
L G+ + + + ++GLL+DNLLDL+H + H T+
Sbjct: 128 PRAKHLDSPGW-VTVRGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPITTEV 186
Query: 217 AKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL- 266
+G + + + F ++G++G + D+E+ PC+ L I+ G L
Sbjct: 187 DEGAGIVRVSRHMDDAECPPFYAKSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPVGVLP 245
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
E + H + PSS K + +S D+A+
Sbjct: 246 EADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWAT 283
>gi|386844703|ref|YP_006249761.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105004|gb|AEY93888.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451797996|gb|AGF68045.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 354
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 52 PYNTRL-KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPL 109
P+ T +N W+ A+S ++ + ++ EP V +R +D G + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGRE-LLGRTILGEPLVFYRAEDDGTAVALADRCVHRRFPL 60
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 166
++ RI C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD
Sbjct: 61 SESRLDGDRIVCGYHGFTYDTTGACVYVPGQKRVPRTARVASYPVVEQDSLVWVWIGDPA 120
Query: 167 -PPTATI---PCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------- 212
TI P L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 121 LADAGTIPRAPHLDSPDWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEV 177
Query: 213 -----TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTI 258
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 178 AETPITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHS 236
Query: 259 GISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 317
I+ G L E H + PS+ K + +S DFA + V R
Sbjct: 237 RIAPVGVLPEPDGGDPNGFHTEITYAITPSTDGKVFDFWAVSRDFAKDDEEV---TTFLR 293
Query: 318 HFAEQVLNEDL-RLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAK 370
F V+ +D+ L L Q+ A L + D G+ R+ +E+G K
Sbjct: 294 DFNHTVVMQDVDALNLLQRTLGTERAGYQELSINIDTGGLAARRILARLVEEGDK 348
>gi|148556168|ref|YP_001263750.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148501358|gb|ABQ69612.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 39/271 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK W+ A S++++ + + +I+R DG P + + C HR PLHLG
Sbjct: 8 LKRAWYVAAMSSEVEGEALFHRRILGTSVMIYRLADGTPVAMHDRCPHRFAPLHLGQREG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I C YH + DG+C P R +++ P E+ G +WIW D P P
Sbjct: 68 DEIACRYHALRFDADGRCTHNPHGNGRIPDAARVRRFPLLERYGFLWIWMDDSDPD---P 124
Query: 174 CLLPPSG--FEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 226
LLP E H A+ M + + + L++DN++DL+H H +G P +
Sbjct: 125 ALLPDFSPLEEGHPNAVAQTYMHMDVNYELIIDNVMDLSHIDHVHGEIITTRGQLSPVVP 184
Query: 227 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPGK 265
K + + W+ P P D+ + P + ++G +
Sbjct: 185 KVRERDTHISARWEWSQTPAMMIFAPFLPRPEDAARHYFDISWTAPANIQLSVGAVQDSD 244
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
G T Q + LH C P KT +
Sbjct: 245 DFGDATSQ-----YDLHTCTPEDAFKTHYFF 270
>gi|347528222|ref|YP_004834969.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136903|dbj|BAK66512.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 373
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ AFS ++ + + ++ +I+R G P +Q+ C HR PL LG
Sbjct: 5 LENVWYAAAFSDEVGEKPLAR-KLLDQDLMIYRDSAGRPILLQDRCPHRFAPLSLGKTVG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
I+CPYHG + G C P + LR +++ P E+ G++W WPGD P
Sbjct: 64 DEIECPYHGLRFDRTGACSHNPHMKGGGPLRAAAVRAYPVMEKYGILWFWPGD--PGFAD 121
Query: 173 PCLLPPSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+LP F + ++ + + L++DNLLDL+HA F H KG
Sbjct: 122 EAILPKVKFLEETDRYRLVKGLLHVEGNYQLVIDNLLDLSHAQFIHPGFAIKG 174
>gi|398996835|ref|ZP_10699679.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398125734|gb|EJM15199.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 357
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A +L +D + P EP V++R DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAGEAELGED-LYPVTLLNEPVVLYRKSDGTPVALEDACPHRKLPLSMGRLKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIP 173
I+C YHG + G C P ++ + K++S P + G+IWIW GD + T
Sbjct: 62 DEIECGYHGLTFDCSGSCVHAPGSRRIPQGAKVRSYPLAVRYGLIWIWMGDLDLADETKI 121
Query: 174 CLLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
C +P G + ++ M +P + + DNLLD AH + H S+F
Sbjct: 122 CHVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPAHVAWVHQSSFGN 169
>gi|407279364|ref|ZP_11107834.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
sp. P14]
Length = 371
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 144/341 (42%), Gaps = 44/341 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
+ W+ A+ ++ ++ +P ++R +DG P + + C HR PL +G+ V
Sbjct: 19 DAWYVAAWDHEVGRREILARTIAGKPLALYRTEDGRPVALADACWHRLAPLSMGTLVGAD 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
I+CPYHG ++++ G+C MP+ Q N + S P E+ +W+WPGD P P
Sbjct: 79 GIRCPYHGLQFNSAGRCTHMPAQQTINPSAMVASYPVVERHRFVWVWPGD--PMLADPDT 136
Query: 176 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------GWSVP 223
+P F++ + +++ + L+LDNL+DL H F H+S+ + ++V
Sbjct: 137 IPDM-FQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQDELSESDFTVT 195
Query: 224 SLVKFLTPAS--------------------GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+ +T G G D + I +EF+ P + +G++K
Sbjct: 196 HDDRTVTVTRWMLDIDAPPFWQKNMRDKFPGFSGKVDRWQI-IEFQAPSTIRIDVGVAKA 254
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + R + ++ P K + ++ + + R V
Sbjct: 255 GTGAPEGDRSQGVNGFVMNTISPVDEKTALYFWAFMRNYCLDSQLITTQT---RDGVHGV 311
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 362
ED ++ QQ+ + N G +NL + + VR + R
Sbjct: 312 FGEDEAMLTAQQKAIEANPGHEFYNLNIDAGGMWVRRIIQR 352
>gi|113477750|ref|YP_723811.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168798|gb|ABG53338.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 465
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 146/350 (41%), Gaps = 35/350 (10%)
Query: 41 RKSLNV---SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPG 96
+KS N+ +G P + W+P+ + DL+ + F E+ VI+ K+
Sbjct: 7 KKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWR 66
Query: 97 CVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIK 148
++ C HR PL G +NE G ++CPYHGW +S G CE +P + + K+K
Sbjct: 67 VFEDQCPHRLAPLSQGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVK 126
Query: 149 SLPCFEQEGMIWIWPGD-----EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 203
SLP +G+++++ G + P + L S I ++P + L++N+L
Sbjct: 127 SLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDENSNEWICLNTFRDVPYDGLTLMENVL 186
Query: 204 DLAHAPFTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
D +H P+TH T +V P ++ L G +G W+ P R +
Sbjct: 187 DASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGP-----RKGTLGRQETTFI 241
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY---LWRH 318
PG + T + + P + + RL R F+S L F+Q + H
Sbjct: 242 APGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKF-FIQLSPRWYSH 300
Query: 319 FAEQVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
+ + ED ++ L QER N + + LP D R W
Sbjct: 301 IGQNGVLEDDQIFLHYQERYLEAKGGSANFSKAFYLPTKADLFVFELRSW 350
>gi|323135827|ref|ZP_08070910.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
gi|322398918|gb|EFY01437.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
Length = 328
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 123/299 (41%), Gaps = 50/299 (16%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
+ N W V + DLK +P E V FR G + + C HR L LG V
Sbjct: 3 SSFANVWTIVGLARDLKPGRPLPMRVAGERIVFFRDASGNAAALLDRCPHRGVALSLGRV 62
Query: 115 NEGRIQCPYHGWEYSTDG-KCEK--MPSTQLRNVKIKSLPCFEQEGMIWIWPG----DEP 167
+ G I+CP+HGW + G C P + N+ SLP E G++W++ G DEP
Sbjct: 63 DRGVIECPFHGWRFDGSGANCGAPFNPDAKRENLGAISLPARESGGLLWLYTGFSPEDEP 122
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
+ G + A+ V+ +++N+LD+ H PF H T G + LV+
Sbjct: 123 ALSDT---FAAPGLALCAQSVL-WRAHWTRVMENMLDMPHLPFVHRRTIGAG--LRELVE 176
Query: 228 FLTPASGLQGYWD---------------PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
+ YW+ P P +E+R P ++ + I PGKL
Sbjct: 177 -----KRMDVYWEDRPYGARVTNAVDSVPRPGALEYRFPNVM--ELFIDPPGKL------ 223
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
+ C+P + TRL+ DFA P + ++R ++ NED +V
Sbjct: 224 -----FRLMVACVPEDEETTRLILLTMRDFA----RSPLLHPVFRWMNRRIANEDQTIV 273
>gi|170289317|ref|YP_001739555.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176820|gb|ACB09872.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 331
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 114
+KN W+ V S +LK ++ F E +RG +G C+ + C HR + G V
Sbjct: 2 IKNQWYVVLSSRELKKGQLIGVTRFGEKLAFWRGSNGKVHCISDICCHRGASISHGKVLS 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
N R+ CP+HG+EY + G+ +P+ N ++KS P +E IWIW GD P
Sbjct: 62 NGERVICPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPE 121
Query: 170 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP F+ ++ E + + ++N LD H PF H +T +G
Sbjct: 122 K------PPKYFDDITDELVYTEFKEVWNVHYSRAIENQLDPIHLPFVHYNTIGRG 171
>gi|88809638|ref|ZP_01125145.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
gi|88786388|gb|EAR17548.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
Length = 440
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 131/317 (41%), Gaps = 52/317 (16%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVNE-GR 118
W+PVA+ DL F E V++ G + + C HR PL G +N G
Sbjct: 9 WWPVAYLRDLDPGKPQRFTLLERDLVLWWDGVNSTWRAFNDVCPHRLVPLSEGRINSAGD 68
Query: 119 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
++CPYHGW ++ +G C ++P + R SLP +G++++W GD +
Sbjct: 69 LECPYHGWSFNGEGHCTRIPQMGDAGRARGRRSNCASLPTRSAQGLLFVWSGDPEKAESN 128
Query: 173 PCLLPPSGFE---------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
L PS E I + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 DLPLVPSLQEEGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKTVGKRENAA 188
Query: 224 SLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--H 279
++ + SG + WD P + G+L Q T A L H
Sbjct: 189 PVLAVIQSEDDSGFEAVWDEGP------------------RRGRLGSQFTHFKAPQLMWH 230
Query: 280 QLHV-----------CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNE 326
L +P R + RL R F S L K V ++ W +H + E
Sbjct: 231 DLDAKGFARILTVVYAVPIRRGQCRLFARFPFQFKSALPKVVVGLRPRWLQHIGNHKVLE 290
Query: 327 DLRLVLGQQERMNNGAN 343
D ++ L QER+ A
Sbjct: 291 DDQVFLHWQERVLESAG 307
>gi|158336046|ref|YP_001517220.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158306287|gb|ABW27904.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 458
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 44/341 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE--G 117
W+PVA DL P + +VI++ KD G Q+ C HR PL G +++ G
Sbjct: 22 WYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSGQYLVFQDLCPHRLAPLSEGRIDDQTG 81
Query: 118 RIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIW--PGDEPPT 169
++ C YHGW++ G C +P S Q + + +P G++W+W P +
Sbjct: 82 QLMCSYHGWQFDQQGLCTHIPQAEAVTSQQSQLYCVTVIPTQAHSGLLWVWPDPDTQDVA 141
Query: 170 ATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KGWS 221
AT P L P F +++ + +L + L++NL D +H PF H +
Sbjct: 142 ATQPLPLSPLVDADQNF-VYSSFMRDLAYDWQTLVENLSDPSHVPFAHHGVQGNRNQAAP 200
Query: 222 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
+P V TP + ++ F+PPC ++E Q + +
Sbjct: 201 IPMEVLTSTPELIEVQTTGKFSTNITFQPPC------------RMEYQFSIGDGKQATMV 248
Query: 282 HVCLPSSRKKTRLLYRMSLDFAS-VLKHVP-FMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
C+P + ++R++ + +FA+ ++K +P +++++ VL+ D+ L+ Q++++
Sbjct: 249 TYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMLNR--NPVLDGDMILLRSQEKQLL 306
Query: 339 -----NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
N + LP D+L + YR W + G Q+P+
Sbjct: 307 QHTQTQNWQTTYKLPTSADRLVIEYRRWFEKYSHG--QIPW 345
>gi|398990711|ref|ZP_10693884.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399013456|ref|ZP_10715761.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398113575|gb|EJM03420.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398143161|gb|EJM32041.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 371
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ V S+ L D M P +P+V FR G+ + + C HR L +GS
Sbjct: 2 LTNLWYVVLPSSQLNDGLM-PVQLLGQPFVAFRDYAGVAHVLSDICVHRGGSLSVGSKVG 60
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST-QLR---NVKIKSLPCFEQEGMIWIWPGD-----EP 167
+QCPYHGW + DG C ++P+ LR ++ + P E+ G IW + GD P
Sbjct: 61 NSVQCPYHGWRFGADGVCTQIPAQPDLRIPAKARVDAYPTLERYGWIWAFLGDLPESERP 120
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P T+ + P+ + + + +++N LD AHAPF H STF
Sbjct: 121 PLPTLDWIDDPAIRVVSGYFDWQASWDR--IIENGLDFAHAPFVHGSTFG 168
>gi|359400756|ref|ZP_09193733.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
gi|357597795|gb|EHJ59536.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
Length = 332
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 64 VAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 123
A+S++L + M+P + EP V++R DG C+++ C HR PL LG + ++C Y
Sbjct: 2 AAWSSELVGEAMMPREVLGEPIVLYRAADGSIVCMEDRCCHRLAPLSLGERDGDAVRCLY 61
Query: 124 HGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS-- 179
HG++++ DG C ++P + R+ +++ P E+ G IW+W GD P A + L+PP+
Sbjct: 62 HGFKFARDGACVEIPGQKTIPRSACVQTYPATEKGGWIWVWMGD-PARANLD-LVPPAIG 119
Query: 180 -GFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
G E + + ++ ++ L+ DNL D +H + H ++F
Sbjct: 120 PGDEGWLTDQSHLDYDADYQLINDNLTDFSHLSYVHRNSFG 160
>gi|87198731|ref|YP_495988.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87134412|gb|ABD25154.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 341
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ +S ++ + + ++PWVI+R DG P + + C HR PL G +
Sbjct: 5 LRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRGQRDG 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG +S+ G C P T L +++ LP E+ +W WPGD P
Sbjct: 65 DMMRCGYHGLAFSSSGGCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDA--DRADPA 122
Query: 175 LLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFA 217
L+P GF + +E P+ G L+ DNL+DL+HA F H +F
Sbjct: 123 LIPDFGF-----LDVERPLHRGHLKMDAGYELVTDNLMDLSHAEFIHRDSFG 169
>gi|422302482|ref|ZP_16389845.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
gi|389788306|emb|CCI16148.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
Length = 460
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 136/329 (41%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++SLP ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLTSEKFGRTLTA 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D L YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLLVFEYRNW 344
>gi|433457370|ref|ZP_20415370.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Arthrobacter crystallopoietes BAB-32]
gi|432194953|gb|ELK51530.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Arthrobacter crystallopoietes BAB-32]
Length = 355
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ST++ + C E+P V+FR +D + + CAHRA PL G
Sbjct: 7 NTWYVAAWSTEVTRKPIRRVIC-EQPIVLFRTQDNEAIALADRCAHRAFPLSEGRTIGDS 65
Query: 119 IQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHG+ Y DG C K+P ST +++ P EQ+G IW+W GD P P +
Sbjct: 66 VECGYHGFTYGPDGMCTKVPAQSTIPERARVRKYPVVEQDGWIWVWTGD--PELANPADV 123
Query: 177 PPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGW 220
P + + + E H L+ DNLLDL H F H +T +
Sbjct: 124 PDTHWMVDPEWATVTHSYHFKCRADLIHDNLLDLTHESFLHKTTVGDDY 172
>gi|428222533|ref|YP_007106703.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427995873|gb|AFY74568.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 345
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+ FW+PV +L D F E+ V++ + G P ++ C HR+ L LG+V
Sbjct: 9 LRKFWYPVIPIANLSDGPK-SFTLLEQKIVLWLDELGKPAAAKDQCCHRSAQLSLGTVEN 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATI 172
G I CPYHGW++ G C +P +Q +V +I + C E+ G +W+ + P A +
Sbjct: 68 GAIVCPYHGWQFDRAGNCVHIPQSQNISVPSASRINAYKCTERYGYVWVCLDE--PIAEV 125
Query: 173 PCLLPPSGFEIHAEIVMEL--PIE-HGL-LLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 227
P + FE + ++ E P + GL +++N D AH F HT TF +K P L++
Sbjct: 126 PTIT--EAFEPNFRLIREFYEPWKCAGLRVMENEFDFAHPTFVHTGTFGSKDHPTPELLE 183
Query: 228 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTI 258
+ GL+G ++ + + + + T+
Sbjct: 184 IVETPEGLKGQAKQIVVNTKLQQQNLKMDTV 214
>gi|158319648|ref|YP_001512155.1| Rieske (2Fe-2S) domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158139847|gb|ABW18159.1| Rieske (2Fe-2S) domain protein [Alkaliphilus oremlandii OhILAs]
Length = 324
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+ + S +K D +V IFR G GCV + C HR L LG V +
Sbjct: 2 ISNQWYAILPSKKVKTDKIVGVKRMNLDLAIFRNSKGEIGCVVDQCTHRGAALSLGKVKD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
IQCP+HG E++ GKC +P+ + +K P E+ G+I++W GDE
Sbjct: 62 DCIQCPFHGLEFNKIGKCMFIPANGKASTGDISRYNVKHYPVREENGIIYLWYGDE---E 118
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKG 219
I LP EI V +H ++N LD+ H PF H ST +G
Sbjct: 119 KITDDLPFFDKEIDDSFVFSELEDHWNSHYSRCIENQLDVVHLPFVHQSTIGRG 172
>gi|403527463|ref|YP_006662350.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
gi|403229890|gb|AFR29312.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
Length = 367
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 138/353 (39%), Gaps = 53/353 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N WF + ++ ++ P ++R DG + + C HR PL G V
Sbjct: 20 NAWFVAGWDHEISAKGILARTIAGRPLALYRTGDGRAVALADACWHRLAPLSQGKLVGRD 79
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
IQCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD PT P L
Sbjct: 80 EIQCPYHGLRYNAAGRCTSMPAQETLNPSATVPSFPVVERYRYVWVWLGD--PTKADPGL 137
Query: 176 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 224
LP G IHA P + L+LDNL+DL H F H+S+ + S
Sbjct: 138 LPDMHQLDSPEWAGDGETIHA------PCNYQLVLDNLMDLTHEEFVHSSSIGQEELSES 191
Query: 225 ----------------LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 259
+ P L+ D +P +D + + P + +G
Sbjct: 192 EFEVTHDETSVTVTRWMRNIDAPPFWLKNMRDKFPDFEGKVDRWQIIHYYFPSTICIDVG 251
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 319
+++ G + R + + ++ P + + + ++ + R+
Sbjct: 252 VAEAGTGAPEGDRSRGVNGYVMNTITPETERSCHYFWAFMRNYR---LESQLITTQLRNG 308
Query: 320 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 370
V ED ++L QQ + N +NL + + VR RL ALE ++
Sbjct: 309 VHGVFGEDEAMLLAQQAAIDANPDYEFYNLNIDMGGMWVR-RLLERALEAESR 360
>gi|116070900|ref|ZP_01468169.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
gi|116066305|gb|EAU72062.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
Length = 438
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 24/297 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIF---RGKDGIPGCVQNTCAHRACPLHLGSVN-E 116
W+P+A+ DL F E VI+ + + + C HR PL G +N E
Sbjct: 9 WWPIAYLQDLDRSQPNRFTLLERDLVIWWDAKAEQASWRVFPDVCPHRLVPLSEGRINDE 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD----- 165
G ++CPYHGW + +G C +P + R + SLP +G++++W G+
Sbjct: 69 GLLECPYHGWSFDGEGHCRSIPQAPDNTKPEARRSRCSSLPTAIGQGLLFVWTGEPDAAN 128
Query: 166 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
+ P +P L + +LP++ LL+N+LD++H PFTH T + +
Sbjct: 129 QHPLPLVPALEEDPKSWTLQDTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGNRNNASPV 188
Query: 226 VKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHV 283
+ +T + G +W+ P R + T P + T + + +
Sbjct: 189 LATITREAEDGFDAFWEEGP-----RRGKLGSQTTSFHAPQLMWHDLTAKGFARILTVVY 243
Query: 284 CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNEDLRLVLGQQERM 338
+P R + RL R F S + K + ++ W +H + ED ++ L QER+
Sbjct: 244 AVPIRRGECRLFARFPFQFQSAVPKLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERV 300
>gi|421865085|ref|ZP_16296769.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia cenocepacia H111]
gi|358074971|emb|CCE47647.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia cenocepacia H111]
Length = 359
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRATDGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 212
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 213 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 262
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 263 PG 264
G
Sbjct: 237 AG 238
>gi|300693204|ref|YP_003749177.1| vanillate o-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
gi|299075241|emb|CBJ34531.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
Length = 342
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PGQADPAL 119
Query: 176 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 IHHLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|398838093|ref|ZP_10595376.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398905470|ref|ZP_10652864.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
gi|398117134|gb|EJM06888.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398174440|gb|EJM62235.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
Length = 348
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 136/338 (40%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVTAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+P P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQP--LADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ + G +W D P+D F PP VL +G++
Sbjct: 176 VTTVDGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK +Q + P + + M+ +F + R
Sbjct: 236 HAGKGGYHAPQQFKASSIVVDFITPQTETSIWYFWGMARNFNP---QDEALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLISHPQRNLLKLNIDAGGVQSR 330
>gi|115359078|ref|YP_776216.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284366|gb|ABI89882.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 366
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 137/355 (38%), Gaps = 67/355 (18%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ +++K D + E ++FR G V N C HR PLHLG
Sbjct: 12 LRNAWYVAAWDSEVKADELFQRTLLNESVLLFRNDRGEVQAVSNRCPHRFAPLHLGKKLP 71
Query: 117 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 171
+QCPYHG E+ G+C + P + ++K+ P E+ +IWIW G+ ++
Sbjct: 72 NGVQCPYHGLEFDGSGQCTRNPHGGGVVPKAAQLKTYPVVEKYSLIWIWMGEASIADSSK 131
Query: 172 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
IP CL P A+ + + + L DN+LDL+H + H T ++
Sbjct: 132 IPDFSCLDPQ--LSHVAKRYLHVKANYVLETDNILDLSHIQYLHPGTLGSSSVADAITSV 189
Query: 229 L----TPASGLQGYWDPYP------------------IDMEFRPPCMVLSTIGISKPGKL 266
+ T S Q D P ID+ + P +L G GK
Sbjct: 190 VQEGNTVYSMRQTVGDIMPEFLYRQRRIPVGTPVDRWIDVRWDAPAHMLLDAGSVATGKP 249
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS-------------LDFASVLKHVPFMQ 313
+ H+ P + T + +S DF S L H PF
Sbjct: 250 RSEGVSNKIAHIFS-----PETASTTHYWFAVSNPLSMGDDGMQRAEDFVSGLVH-PFQ- 302
Query: 314 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLP---VGYDKLGVRYRLWRDAL 365
NEDL ++ QQ M A+ W+L + D VR R D L
Sbjct: 303 -----------NEDLPMLEAQQH-MIGEADFWSLKPVLLAGDAAAVRARRILDKL 345
>gi|170079201|ref|YP_001735839.1| Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
gi|169886870|gb|ACB00584.1| probable Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
Length = 452
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 27/323 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 119
W+P+ F DL F EP VI+ + K + C HR PL G + +G +
Sbjct: 23 WYPIHFVQDLDKTKPTRFVLLGEPLVIWWQPKTQQWQVFSDVCPHRLAPLSEGRIVDGCL 82
Query: 120 QCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD-----EP 167
+CPYHGW+++ G C K+P + ++K+ ++G+++++ GD +
Sbjct: 83 ECPYHGWQFAETGACTKIPFQAPDGEAHHSPRAQVKTYASCVKQGLLFVYGGDRHEAAQT 142
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P T+P L G + A++ ++P + LL+N+LD +H FTH + +
Sbjct: 143 PIPTVPQLDQHPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPRVGNRKNAKEFIL 202
Query: 228 FLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 285
++ +G G W+ P R + P + + +
Sbjct: 203 DVSEVEKTGFTGNWEEGP-----RRGTLGSQKTTFFAPAAMWHDIPESPFGQVMTVVYAT 257
Query: 286 PSSRKKTRLLYRMSLDFASVLKHVP--FMQYLWRHFAEQVLNEDLRLVLGQQER-----M 338
P+ + + R + R+ F + + + F + H + + ED ++ L QER
Sbjct: 258 PTEKGRCRAIVRLPFRFKAAIPRLAFKFTPRWFSHLNQMGILEDDQIFLHLQERELAKST 317
Query: 339 NNGANVWNLPVGYDKLGVRYRLW 361
N A LP D + YR W
Sbjct: 318 QNYAKTCYLPTSSDLFVLAYRQW 340
>gi|427718650|ref|YP_007066644.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427351086|gb|AFY33810.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 464
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 138/328 (42%), Gaps = 34/328 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE-GR 118
W+PV + DL+ PF VI+ K + + C HR PL G +N+ G
Sbjct: 32 WYPVYYLDDLEQSQPTPFTLLGRDIVIWWDKQAKLWRAFDDQCPHRLAPLSEGRINQDGL 91
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGMIWIWPGDEPPTAT 171
++CPYHGW +S G C+++P + + + SLP E++G+++++PG+ P AT
Sbjct: 92 LECPYHGWAFSGSGSCDRIPQQVVNGIAETSQRACVASLPTAERQGLLFVYPGN-PENAT 150
Query: 172 ---IPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT-HTSTFAKGWSVP 223
IP + P P+ + + +LP + LL+N+LD +H PFT H S + + P
Sbjct: 151 KTQIPIVAPLEESPTEW-VCLNTFRDLPYDALTLLENVLDSSHLPFTHHRSVGNRANAAP 209
Query: 224 SLVKFLTP-ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 282
++ ++ G G W+ P R + PG + T + +
Sbjct: 210 VELEVISSNKQGFTGIWEEGP-----RRGKLGRQETKFIAPGLMWHDLTSKQFGRTLTVV 264
Query: 283 VCLPSSRKKTRLLYRMSLDFASVLKHV--PFMQYLWRHFAEQVLNEDLRLVLGQQERM-- 338
P + + RL R F + L + + H + + ED ++ L QER
Sbjct: 265 YATPIRKGECRLFARFPFKFPNKLPGLLMKLTPRWYNHIGQNGILEDDQIFLHYQERYLE 324
Query: 339 -----NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D R W
Sbjct: 325 AKGGSTNFTKAFYLPTKADSFVFELRQW 352
>gi|161519763|ref|YP_001583190.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189354058|ref|YP_001949685.1| vanillate o-demethylase oxygenase subunit [Burkholderia multivorans
ATCC 17616]
gi|160343813|gb|ABX16898.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338080|dbj|BAG47149.1| putative vanillate o-demethylase oxygenase subunit [Burkholderia
multivorans ATCC 17616]
Length = 347
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D + E V FR +G +++ C HR PL LG+V +
Sbjct: 3 LKNAWY-VACTPDEFASKPLGRQICGERMVFFRDGEGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATI- 172
G + C YHG DGKC MP ++R + I+ P E+ G +W+WPGD + +ATI
Sbjct: 62 GHLVCGYHGLTMGADGKCTSMPCQRVRGIPAIRRYPAVERYGFVWVWPGDPAQADSATIH 121
Query: 173 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P + + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 PLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|404400064|ref|ZP_10991648.1| oxidoreductase subunit alpha [Pseudomonas fuscovaginae UPB0736]
Length = 353
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG++G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEK-MVFYRGQEGAVMAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P + + + + E+ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 PHLEWAVSDQWAYGGGLFEIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARYMENIMAPPFWRMALRGNHLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ F H + R
Sbjct: 236 HAGKGGYHAAPEHKAASIVVDFITPQTETSIWYFWGMARSFNP---HDQALTESIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|55584974|gb|AAV53699.1| DdmC [Stenotrophomonas maltophilia]
Length = 339
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 48/316 (15%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T ++N W+ A +L + + + P ++R DG+ + + C HR PL G +
Sbjct: 2 TFVRNAWYVAALPEELSEKPL-GRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGIL 60
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
G +QCPYHG E+ G+C P + ++ ++S P E++ +IWIWPGD P
Sbjct: 61 VNGHLQCPYHGLEFDGGGQCVHNPHGNGARPASLNVRSFPVVERDALIWIWPGD--PALA 118
Query: 172 IPCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTH-----TSTFAK--- 218
P +P G + + + LL+DNL+DL HA + H T F +
Sbjct: 119 DPGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRANAQTDAFDRLER 178
Query: 219 -----------------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
G + KFL A+ W+ D+ + +L+ I ++
Sbjct: 179 EVIVGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWN----DIRWNKVSAMLNFIAVA 234
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G ++ + H H+ P + + S +F P M + R +
Sbjct: 235 PEG-----TPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGI---DDPEMDGVLRSWQA 286
Query: 322 QVLNEDLRLVLGQQER 337
Q L ++ ++V+ ER
Sbjct: 287 QALVKEDKVVVEAIER 302
>gi|359767566|ref|ZP_09271352.1| vanillate demethylase oxygenase subunit [Gordonia
polyisoprenivorans NBRC 16320]
gi|359314961|dbj|GAB24185.1| vanillate demethylase oxygenase subunit [Gordonia
polyisoprenivorans NBRC 16320]
Length = 375
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 41/270 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N W+ A+ ++ ++ +P ++R G P + + C HR PL +G +
Sbjct: 19 NAWYAAAWDHEVGSTQILARTIAGKPLALYRTDSGRPVALADACWHRLAPLSMGKRIGAE 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
I+CPYHG +Y+ G+C +MP+ + N + S P E+ +W+WPGD PT P
Sbjct: 79 EIRCPYHGLQYNAAGRCTRMPAQETINPSAMVASYPIEERHRYLWVWPGD--PTLADPST 136
Query: 176 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
+P F++ + + +++ + L++DNL+DL H F H+S+ G S +F+
Sbjct: 137 IPDM-FQMDSPEWAGDGLTIDVRANYQLVVDNLMDLTHEEFVHSSSI--GQDELSESEFI 193
Query: 230 T------------------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGISK 262
T P L+ D +P +D +EF+ P + +G++K
Sbjct: 194 TTHDENTVTVTRWMHNIDAPPFWLKNMRDKFPGFTGKVDRWQIIEFQAPGTIRIDVGVAK 253
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKT 292
G + R + ++ P ++
Sbjct: 254 AGTGAPEGDRSQGVNGFVMNTISPVDERRA 283
>gi|307107837|gb|EFN56079.1| hypothetical protein CHLNCDRAFT_145588 [Chlorella variabilis]
Length = 563
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 137/346 (39%), Gaps = 53/346 (15%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRI 119
W+P+A+ D+ DD F E+P VI++ G C+++ C HR PL G + G +
Sbjct: 93 WYPIAYVKDIPDDAPYGFVLLEQPIVIWKDGGGAYRCLRDACPHRLVPLSDGRIAPNGEL 152
Query: 120 QCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWI------WPGDEPPTA 170
QCPYHGW++ G C MP + C ++G++W+ G EP T+
Sbjct: 153 QCPYHGWQFKGCGTCTLMPQGGDPTAPRAAATAYQCAVKQGLVWVKLQPAPTDGSEPDTS 212
Query: 171 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
+I + L G+ ++ ++P + L++N++D H PFTH A +L
Sbjct: 213 SIHTIPELDKEGWFAFGDMWRDIPYDWATLIENVVDCGHVPFTHHGERA------ALGVL 266
Query: 229 LTPASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
G QG W P F P ++ TI + +TR
Sbjct: 267 ERGQFGFQGVWPTGPRKGALGAQHTRFEGPVLMRHTI--------DAFDTRGFGNITAVY 318
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKHVPF--MQYLWRHFAEQ-VLNED---------LR 329
V P + + R + R F + L + F M H VL+ED
Sbjct: 319 GV--PVAPGRCRAIVRQPFRFKNKLLPLAFKVMPAFLGHLGNNSVLDEDNIFLHMQARAC 376
Query: 330 LVLGQQERMNNG------ANVWNLPVGYDKLGVRYRLWRDALEKGA 369
+ +QE + G V+ +P D +R W ++ G
Sbjct: 377 FLPAEQESVRRGMGEKPAGQVYYMPAASDAYVSAFRNWMKSVAGGG 422
>gi|402567996|ref|YP_006617340.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
gi|402249193|gb|AFQ49646.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
Length = 373
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 36/243 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N LKN W+ VA + D D + E V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTA 170
V +G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD E A
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFVWVWPGDASEADPA 132
Query: 171 TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------------- 212
+P L H + + ++ L++DNL+DL H + H
Sbjct: 133 RLPALQWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTT 192
Query: 213 -------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGIS 261
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 193 GNGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVA 249
Query: 262 KPG 264
G
Sbjct: 250 HAG 252
>gi|254574850|pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase
gi|254574851|pdb|3GKE|B Chain B, Crystal Structure Of Dicamba Monooxygenase
gi|254574852|pdb|3GKE|C Chain C, Crystal Structure Of Dicamba Monooxygenase
gi|254839314|pdb|3GB4|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839315|pdb|3GB4|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839316|pdb|3GB4|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839346|pdb|3GOB|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839347|pdb|3GOB|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839348|pdb|3GOB|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839356|pdb|3GTE|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839357|pdb|3GTE|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839358|pdb|3GTE|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839359|pdb|3GTS|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839360|pdb|3GTS|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839361|pdb|3GTS|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|255311844|pdb|3GL0|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311845|pdb|3GL0|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311846|pdb|3GL0|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311847|pdb|3GL2|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311848|pdb|3GL2|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311849|pdb|3GL2|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
Length = 349
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 48/316 (15%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T ++N W+ A +L + + + P ++R DG+ + + C HR PL G +
Sbjct: 3 TFVRNAWYVAALPEELSEKPL-GRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGIL 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
G +QCPYHG E+ G+C P + ++ ++S P E++ +IWIWPGD P
Sbjct: 62 VNGHLQCPYHGLEFDGGGQCVHNPHGNGARPASLNVRSFPVVERDALIWIWPGD--PALA 119
Query: 172 IPCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTH-----TSTFAK--- 218
P +P G + + + LL+DNL+DL HA + H T F +
Sbjct: 120 DPGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRANAQTDAFDRLER 179
Query: 219 -----------------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
G + KFL A+ W+ D+ + +L+ I ++
Sbjct: 180 EVIVGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWN----DIRWNKVSAMLNFIAVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G ++ + H H+ P + + S +F P M + R +
Sbjct: 236 PEG-----TPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGI---DDPEMDGVLRSWQA 287
Query: 322 QVLNEDLRLVLGQQER 337
Q L ++ ++V+ ER
Sbjct: 288 QALVKEDKVVVEAIER 303
>gi|17548443|ref|NP_521783.1| vanillate O-demethylase oxygenase [Ralstonia solanacearum GMI1000]
gi|17430690|emb|CAD17373.1| probable vanillate o-demethylase oxygenase subunit oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 342
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PEQADPAR 119
Query: 176 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 218
+ S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 IHHLEWAESEAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTKV 179
Query: 219 -GWSVPS--LVKFLTP----ASGLQ--GYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
G +V + ++ + P A+ L+ G D P D F PP VL +G++ GK
Sbjct: 180 EGDAVVTSRFMENIMPPPFWATALRGAGLADDVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|374989216|ref|YP_004964711.1| oxidoreductase subunit alpha [Streptomyces bingchenggensis BCW-1]
gi|297159868|gb|ADI09580.1| oxidoreductase subunit alpha [Streptomyces bingchenggensis BCW-1]
Length = 354
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 40/280 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A+ ++ + ++ EP +R + DG + + C HR PL ++
Sbjct: 6 RNQWYVAAYGREIGRE-LLGRTILGEPIAFYRSESDGAVVALHDRCVHRRYPLSASRLDG 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD---EPPTAT 171
R+ C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD PTA
Sbjct: 65 DRVVCGYHGFTYDTTGTCVFVPGQKRIPRTARVASYPVVEQDSLVWVWIGDPKSAAPTAI 124
Query: 172 --IPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTH--------------T 213
P L P + ME PI+ +GLL+DNL+DL+H + H T
Sbjct: 125 PRAPWLADPRWTTVGG---ME-PIDAGYGLLVDNLMDLSHETYLHGGYIGTPEVAETPIT 180
Query: 214 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
+T +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 181 TTVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPVG 239
Query: 265 KLEGQNTRQ-CATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
L G + A H+ + PS+ + +S DFA
Sbjct: 240 VLPGPDGDDPDAFHVEITYAITPSTEHSVYDFWAVSRDFA 279
>gi|209516871|ref|ZP_03265721.1| Vanillate monooxygenase [Burkholderia sp. H160]
gi|209502687|gb|EEA02693.1| Vanillate monooxygenase [Burkholderia sp. H160]
Length = 376
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 125/316 (39%), Gaps = 45/316 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C EP V +R DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACMPDEVADKPLGRQIC-GEPMVFYRNADGAVVALEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG E GK MP ++ I+S P E+ G +W+WPGD + A +
Sbjct: 63 TLVCGYHGLEMGCQGKATGMPGQRVNGFPSIRSYPVIERYGFVWVWPGDATQADAAKLHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWAESSEWAYGGGLYHIRCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTVAEGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F + + P K +GL D P+D F PP VL +G++ G
Sbjct: 183 TVRTSRFMENVAAPPFWKMALRGNGLA---DDVPVDRWQICHFTPPSHVLIEVGVAHAGH 239
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE---Q 322
+ P + + M+ +F P+ L E +
Sbjct: 240 GGYHAPADKKASSIVVDFITPETETSIWYFWGMARNFR------PYDAALTASIREGQGK 293
Query: 323 VLNEDLRLVLGQQERM 338
+ +EDL ++ QQ+ +
Sbjct: 294 IFSEDLEMLERQQQNL 309
>gi|302039438|ref|YP_003799760.1| rieske iron-sulphur protein [Candidatus Nitrospira defluvii]
gi|300607502|emb|CBK43835.1| Rieske iron-sulphur protein [Candidatus Nitrospira defluvii]
Length = 362
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L FW+P + ST L M +P ++ R K G +++ C HR PL G +
Sbjct: 17 LFGFWYPASTSTALAVGQMQTQVMLGQPILVCRNKQGQVAAMRDICPHRGMPLSFGQFDG 76
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDEPPT 169
R++C YHGW++ T G+C +P+ Q + I S PC +Q+G IW++ P + P
Sbjct: 77 ERVECAYHGWQFDTCGRCRHIPALVEGSPLQPEKIGITSYPCQDQDGYIWVFLPDPQQPK 136
Query: 170 ATIPCL----LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
+P L LP + I +++ I+ G++ L+D AH PF H S++
Sbjct: 137 LPVPELPRLPLPSKPYRMIQISTILDCTIDDGIV--GLMDPAHGPFVHQSSW 186
>gi|75907526|ref|YP_321822.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701251|gb|ABA20927.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 443
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 143/345 (41%), Gaps = 57/345 (16%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+PV+ DL P VI++ K + + C HR PL G +++ G
Sbjct: 11 WYPVSPIEDLDPKRPTPVTLLGIRLVIWKPKSSDSFRIFIDQCPHRLAPLSEGRIDDKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVK---IKSLPCFEQEGMIWIWP------ 163
+ C YHGW++ T+G C ++P + +N K + SLP ++ ++W+WP
Sbjct: 71 NLMCSYHGWQFDTEGVCTRIPQAENPEIVTKNQKDFCVNSLPVRQENDLLWVWPDVNSQE 130
Query: 164 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 219
+ P P + GF + V +L + L++N+ D +H PF H +G
Sbjct: 131 LAHQTPLPLSPQVDASKGF-VWTSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREQG 189
Query: 220 WSVPSLVKFLTP------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
+ P + TP A GL + F PPC + I + GK G T
Sbjct: 190 RARPISIMQSTPGLIEAVADGL------VTAKITFEPPCRLEYAISVGNDGKQLGLVT-- 241
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLV 331
CLP S K+R++ + +FA L + W H + VL+ D+ ++
Sbjct: 242 ---------YCLPVSPGKSRIVAQFPRNFAKTLHRL--TPRWWDHIKTRNLVLDGDM-IL 289
Query: 332 LGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGA 369
L QQE + + + +P D+L + +R W D G
Sbjct: 290 LNQQEHLIQQRQLSASWKTAYKMPTSADRLVIEFRKWFDKYCDGG 334
>gi|221215639|ref|ZP_03588601.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|221164468|gb|EED96952.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
Length = 363
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 39/337 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ + ++ + P P V++R DG +++ C HR PL LG++N
Sbjct: 10 NAWYVAGWDHEIGRQ-LTPRKVCGIPIVVYRKVDGSAAALEDACWHRLLPLSLGTLNGDD 68
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG ++ DG+C +MPS + N ++S P E+ +W+W GD E IP
Sbjct: 69 VVCGYHGLVFAPDGRCVQMPSQETLNPSACVRSFPVVERHRFVWVWMGDPLEADETLIPD 128
Query: 175 LLPPSGFEIHAE-IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVK 227
L E + L ++ LL+DNL+DL H F H S+ ++V K
Sbjct: 129 LFQNDSVEWAGDGGTTHLQCDYRLLIDNLMDLTHETFVHHSSIGNRAVAEAPFTVSRTEK 188
Query: 228 ---------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEG 268
F G +G P+D + F P V +G++ G
Sbjct: 189 TVEVTRWMVNIDPPPFFKKHLGKEG-----PVDRWQHITFHAPSTVTIDVGVAPTGTGAP 243
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
+ R +HV P + + + ++ + + WR + ED
Sbjct: 244 EGDRSQGITGFVIHVSTPETETSCIYYWAIVRNYKLTSQR---LTTEWREAVRSIFAEDK 300
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
++ QQ ++ + P+ D + R + D +
Sbjct: 301 AILEAQQAAVSRYPDRDFYPLNIDGGAILARRYIDQM 337
>gi|107025482|ref|YP_622993.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116693336|ref|YP_838869.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894856|gb|ABF78020.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116651336|gb|ABK11976.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 359
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRAADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|319792598|ref|YP_004154238.1| rieske (2fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
gi|315595061|gb|ADU36127.1| Rieske (2Fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
Length = 369
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 44/319 (13%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ +++ + C ++ V+FR DG +++ C HR PL LG +
Sbjct: 11 NAWYAAAYDVEVRHALLSRTICNQKV-VLFRRTDGQVAVLEDACWHRLMPLSLGRLEGDE 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG Y++ G+C MPS + N ++S P E+ +WIWPGD P P L+
Sbjct: 70 LVCGYHGLVYNSQGRCTHMPSQETLNPSACVRSFPVVEKHRFVWIWPGD--PAKADPALV 127
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + ++ + ++ L++DNL+DL H F H S+ G
Sbjct: 128 PDMHWNDDPAWAGDGKMIRVNCDYRLVVDNLMDLTHETFVHGSSIGNREVAEAPFVATHG 187
Query: 220 WSVPSLVKFLTP-------------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG-- 264
++ +++ A G G D + I + F PC V +G+++ G
Sbjct: 188 DRSATVTRWMEGIDAPPFWGGQIRHARGYTGKVDRWQI-IRFEGPCTVNIDVGVAEAGSG 246
Query: 265 ---KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
K R + + L+ P + K + + ++ + + + R
Sbjct: 247 AVPKDGNPGDRSKGVNGYVLNTITPETDKTCLYFWAFARNYCLGEQR---LTHELREGVA 303
Query: 322 QVLNEDLRLVLGQQERMNN 340
+ ED ++ QQ+ M++
Sbjct: 304 GIFREDELVLEAQQKAMDD 322
>gi|300696759|ref|YP_003747420.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
gi|299073483|emb|CBJ52999.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
Length = 342
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 172
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 173 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 219
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWAESKTWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEG 181
Query: 220 WSVPS--LVKFLTP----ASGLQG--YWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 182 DTVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|340795645|ref|YP_004761108.1| vanillate monooxygenase [Corynebacterium variabile DSM 44702]
gi|340535555|gb|AEK38035.1| vanillate monooxygenase [Corynebacterium variabile DSM 44702]
Length = 382
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 117
N W+ A+ ++ + + +P ++R KDG + + C HR PL G +
Sbjct: 30 NAWYVAAWDHEVTSKSPISRTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLIGRD 89
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
IQCPYHG +Y++ G+C MP+ + N + S P E+ IW+W GD PT P L
Sbjct: 90 GIQCPYHGLQYNSAGRCMSMPAQETLNPSAAVPSYPVVERYRYIWVWLGD--PTLADPTL 147
Query: 176 LPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+P H E + + + L+LDNL+DL H F H+S+ +
Sbjct: 148 VPDMHQMDHPEWTGDGLTIAAACNYQLILDNLMDLTHEEFVHSSSIGQ 195
>gi|399076244|ref|ZP_10751897.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037577|gb|EJL30762.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 340
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 141/342 (41%), Gaps = 64/342 (18%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T L N W+ A+S ++ + T+ + P V++R + + + C HR PL +G +
Sbjct: 2 TYLYNAWYAAAWSHEISE-TLFSRTFLDIPVVLYRNAEAKVIALHDRCPHRFAPLSMGQI 60
Query: 115 NEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TA 170
EGR++C YHG + G C M + + K+++ EQ+ M+WIW GD P TA
Sbjct: 61 VEGRLRCGYHGLSFDEAGACVHSLMSTVAPKAAKVRAFAVHEQDKMVWIWMGDAAPGDTA 120
Query: 171 TIPCLLPPSGFEIHAEIVME-------LPIEHGLLLDNLLDLAHAPFTHTS-------TF 216
IP L P H + VM ++ LL DNL+DL H H +
Sbjct: 121 AIPRL--PH----HTDEVMSCNFGLTTAKADYRLLSDNLMDLTHTALLHPAFGGLDYIAK 174
Query: 217 AKGWS----------VPSLVKFLTPASGLQGY------WDPYPIDMEFRPPCMVLSTIGI 260
K W V + F P + L+ + W P +L +
Sbjct: 175 TKSWEEDGQVVSDHVVEDMPAFFAPGTDLKVHNRDTIRW--------IAPATHILES--- 223
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
++ + T++ H+ P SRK T + + S + M L + F
Sbjct: 224 ----RITPMDDANWETYIPSAHILTPESRKTTHYFWSSASHKDSGVSDEAMMATLIQAFD 279
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNL-PV--GYDKLGVRYR 359
ED +V Q+RM + A++W+L PV D GVR R
Sbjct: 280 ----FEDKPMVEAVQQRMGD-ADLWDLNPVLLPADAGGVRVR 316
>gi|307155301|ref|YP_003890685.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306985529|gb|ADN17410.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 337
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 35/313 (11%)
Query: 51 QPYNTRLK------NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 104
QP R++ N+W+PVA++ +LK ++P +++ ++R G ++N C H
Sbjct: 10 QPVQNRVREIGINPNYWYPVAWAYNLKPTQIIPVVVWQQAIAVYRDSKGQLHALENACPH 69
Query: 105 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIW 160
+ L G V E + CPYHGWE++ +G+C K+ P +L K +S P E+ G+IW
Sbjct: 70 KGVVLDKGEVRENILVCPYHGWEFNPEGECIKIPYLPPEQKLPCAKARSYPVQEKYGIIW 129
Query: 161 IWPGDEPPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTF 216
++PGD AT L + I++E+P + +N +D+ H F H +
Sbjct: 130 VFPGDA-SLATQQSLPDLPEYNDPDWIIVEIPAHFKAHFSICNENTMDVFHG-FLHRN-- 185
Query: 217 AKGWSVPSLVKFLTPASGLQGY-------WDPYPIDMEFRPPCMVLSTIGISKP-----G 264
+GW P L+K + W I++ + TI I
Sbjct: 186 LQGWFDPILLKLRQQEDSVYAEYRVSYRGWISKFINLTNDANQVTTRTISIEYNYPHYHS 245
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL-DFASVLKHVPFMQYLWRHFAEQV 323
LEG + + +L +L V L +R + ++ L + L +W ++
Sbjct: 246 TLEGVS----SLYLMRLPVSLTETRSFSLFFIKVRLPKWLVNLIRGQLTTIIWHFLFKKF 301
Query: 324 LNEDLRLVLGQQE 336
L++D+ ++ +Q+
Sbjct: 302 LDQDIEMIESEQQ 314
>gi|148554478|ref|YP_001262060.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499668|gb|ABQ67922.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T + N W+ +S DL D V +P V+FR DG+ + + C HR PLHLG V
Sbjct: 2 TFIVNQWYGAIWSQDLGD-APVARRLLGKPIVLFRTDDGV-AALADVCPHRFVPLHLGKV 59
Query: 115 NEGR-IQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+GR I+C YHG E+ G C + P R K++S E+ GM+WIW G+
Sbjct: 60 VDGRAIRCGYHGLEFDRTGACVRNPHNAGRIPPAAKVESHQVAERHGMVWIWMGERDAD- 118
Query: 171 TIPCLLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P L+P F I A +E+ + ++++NLLDL+HA H
Sbjct: 119 --PSLIPDYSFLDSADPQHISARDHLEIRSNYRIVVENLLDLSHASILHDGILGN 171
>gi|398890089|ref|ZP_10643805.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
gi|398188717|gb|EJM76013.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
Length = 357
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A +L +D + P E V++R DG P +++ C HR PL +G
Sbjct: 3 LRNAWYVAASEAELGED-LFPVTLLSESVVLYRKSDGTPVALEDACPHRKLPLSMGRRKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIP 173
I+C YHG + G C + P +Q + +++S P + G+IWIW GD E
Sbjct: 62 DDIECGYHGLTFDCSGSCVRAPGSQRIPQGARVRSYPLAVRYGLIWIWMGDLELADEAKI 121
Query: 174 CLLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
C +P G + ++ M +P + + DNLLD AH + H S+F
Sbjct: 122 CHVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPAHVAWVHQSSFGNA 170
>gi|383786720|ref|YP_005471289.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
gi|383109567|gb|AFG35170.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
Length = 327
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 19/176 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 114
+KN W+ V S++LK ++ F E ++R + G C+ + C HR L G +
Sbjct: 2 IKNQWYVVLSSSELKKGQLIGLTRFGEKLAMWRDEKGDVHCISDICCHRGASLSHGKLLA 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
N R+ CP+HG+EY GK + +PS N K+KS +E IWIW GD P
Sbjct: 62 NGERLMCPFHGFEYDPTGKVQAIPSNGRTAPVPENFKVKSYKTYELADFIWIWYGDNDPP 121
Query: 170 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+ PPS F+ ++++ + + ++N LD H PF H +T +G
Sbjct: 122 S------PPSYFDDIDDSLVYSQFSEIWNVHYSRAIENQLDPIHVPFVHYNTIGRG 171
>gi|425466450|ref|ZP_18845748.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
gi|389831010|emb|CCI26578.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
Length = 460
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 135/329 (41%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGLIYHDLTSEKFGRTLTA 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D L YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLLVFEYRNW 344
>gi|254254788|ref|ZP_04948105.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124899433|gb|EAY71276.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 347
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ + D + C E V FR +G +++ C HR PL LG+V +
Sbjct: 3 LKNTWYVACTPDEFADKPLGRQICGER-MVFFRDANGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD----EPPTAT 171
GR+ C YHG DGKC MP ++ + I+ P E+ G +W+WPGD +P T
Sbjct: 62 GRLVCGYHGLTMGADGKCVSMPCQRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIH 121
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
G+ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 RLHWADDPGWA-YGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|282897695|ref|ZP_06305694.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281197374|gb|EFA72271.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 360
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N L+N W+ S+ LK MV EP ++ R K+G +++ C HRA PL G
Sbjct: 12 NILLRNLWYYALPSSQLKTGKMVSRVLLREPILLTRDKNGQVFAIEDICPHRAVPLSCGR 71
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 166
+ +++C YHGW + + GKC ++P S L +KS P +E +G IWI+ D+
Sbjct: 72 FDGEQVECCYHGWRFDSQGKCTQIPSLLPEQSIDLSKFNVKSYPVYETQGNIWIYMYDKE 131
Query: 167 -----PPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 219
IP + S E VM+ P I+H + L+D AH+P+ H + +
Sbjct: 132 GASINAEIGNIPQIPGFSNIEPDLVEVMKFPCFIDHA--VTGLMDPAHSPYVHQVWWWRS 189
Query: 220 WSVPSLVKFLTPA 232
+ VK P+
Sbjct: 190 GKLHEEVKQFDPS 202
>gi|390438979|ref|ZP_10227404.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
gi|389837609|emb|CCI31528.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
Length = 459
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 135/329 (41%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++SLP ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPLEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLTSEKFGRTLTA 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D YR W
Sbjct: 316 QARGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|15644039|ref|NP_229088.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|418044556|ref|ZP_12682652.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
gi|4981841|gb|AAD36358.1|AE001783_9 oxidase-related protein [Thermotoga maritima MSB8]
gi|351677638|gb|EHA60785.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
Length = 331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 114
+KN W+ V S +LK ++ F E +R +G C+ + C HR + G V
Sbjct: 2 IKNQWYVVLSSRELKKGQLIGVTRFGEKLAFWRDSNGKVHCISDICCHRGASISHGKVLS 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
N R+ CP+HG+EY + G+ +P+ N ++KS P +E IWIW GD P
Sbjct: 62 NGERVMCPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPE 121
Query: 170 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP F+ ++ E + + ++N LD H PF H +T +G
Sbjct: 122 K------PPKYFDDITDELVYTEFKEVWNVHYSRAIENQLDPIHLPFVHYNTIGRG 171
>gi|124007563|ref|ZP_01692268.1| rieske 2Fe-2S domain protein, putative [Microscilla marina ATCC
23134]
gi|123987046|gb|EAY26802.1| rieske 2Fe-2S domain protein, putative [Microscilla marina ATCC
23134]
Length = 344
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 9/175 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L + W VAF+ DLK + P +++R V + CAH+ PL + +
Sbjct: 9 LADHWHAVAFAQDLKKKQSFKTKLYGIPLLLWRDTQAQVFAVADVCAHKRAPLAITCFKQ 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
+ CPYHGW+Y DG+ +PS+ N + +LP + G++W++ G P +
Sbjct: 69 NTLTCPYHGWQYKQDGRVCHIPSSPDIDLSKLNASLHTLPIRQANGLLWVYLGKGTPPSK 128
Query: 172 IPCLL--PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 224
+P L P G++ H ++ + LL++N +D H PF H +G P+
Sbjct: 129 LPLSLADPTKGWQ-HVQLKKQFDTSEELLIENFMDATHTPFIHRGII-RGHGAPT 181
>gi|386288171|ref|ZP_10065332.1| vanillate monooxygenase [gamma proteobacterium BDW918]
gi|385278866|gb|EIF42817.1| vanillate monooxygenase [gamma proteobacterium BDW918]
Length = 351
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ +S DL E V+FR +G + C HR PL G V
Sbjct: 4 LRNCWYCAGWSADLGGQP-TGIKILNEEIVLFRDSEGRATALSGICPHRFAPLSKGKVVG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
RIQCPYHG E++ +G+C P + K++S P E+ G +WIW GD P A
Sbjct: 63 DRIQCPYHGLEFNQEGRCMLNPHGRGLIPERAKLQSYPLAERHGALWIWMGD--PGAADE 120
Query: 174 CLLPPSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+P F E + + + L++DNLLDL HA + H ST A
Sbjct: 121 SKIPEFDFVSDRESWAGATGYLRMDASYELVIDNLLDLTHADYIHGSTLA 170
>gi|451942886|ref|YP_007463522.1| vanillate O-demethylase oxygenase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451902273|gb|AGF71160.1| vanillate O-demethylase oxygenase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 373
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 141/352 (40%), Gaps = 44/352 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + +P ++R +DG + + C HR PL G + GR
Sbjct: 20 NAWYVAAWDHEVTSKGITSRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 78
Query: 119 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 79 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVPSYPVVEQHRYIWVWLGD--PTLADPT 136
Query: 175 LLPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------GWSVP 223
L+P H + + + L+LDNL+DL H F H ST + + V
Sbjct: 137 LVPDMHQMDHPDWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHASTIGQDELSESDFEVT 196
Query: 224 SLVKFLTPAS--------------------GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+T + G +G D + I + + P + +G++K
Sbjct: 197 HTEDSVTVSRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI-IHYYYPSTICIDVGVAKA 255
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + R + + ++ P S + + + ++ + + R V
Sbjct: 256 GTGAPEGDRSQGVNGYVMNTITPESDRSSHYFWSFQRNYRLDSQ---LITTQLREGVHGV 312
Query: 324 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 373
ED ++ QQ+ + N ++L + + VR L + +G +P
Sbjct: 313 FGEDEDMLTAQQDAIDANPDHEFYSLNIDAGGMWVRRILEKALAAEGRLDIP 364
>gi|297203738|ref|ZP_06921135.1| oxidoreductase alpha subunit [Streptomyces sviceus ATCC 29083]
gi|197711787|gb|EDY55821.1| oxidoreductase alpha subunit [Streptomyces sviceus ATCC 29083]
Length = 357
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 52 PYNTRL-KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPL 109
P+ T +N W+ A+S ++ + ++ EP V +R + DG P + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGREELLGRTILGEPLVFYRTEEDGTPVALADRCVHRRFPL 61
Query: 110 HL--GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD 165
H ++ RI C YHG+ Y T G C +P + R ++ S P E + ++W+W GD
Sbjct: 62 HEKPSRLDGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVELDSLVWVWIGD 121
Query: 166 EPPTA---TIP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------ 212
P A TIP L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 122 -PALADADTIPRARHLDSPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGT 177
Query: 213 --------TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL 255
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 178 PEVAETPITTEVDEGAGIVRVSRHMDDAACPPFYAKSTGIEGRITRWQ-DIEYHAPCLYL 236
Query: 256 STIGISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
I+ G L E + H + PSS + +S D+A+
Sbjct: 237 LHSRIAPVGVLPETDGSDPNGFHTEITYAITPSSDGHVYDFWMVSRDWAT 286
>gi|238024817|ref|YP_002909049.1| Vanillate monooxygenase [Burkholderia glumae BGR1]
gi|237879482|gb|ACR31814.1| Vanillate monooxygenase [Burkholderia glumae BGR1]
Length = 359
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 138/366 (37%), Gaps = 63/366 (17%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D + + E V FRG+ G +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP-------- 167
GR+ C YHG E DGK MP ++ + E+ G IW+WPGD
Sbjct: 62 GRLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLH 121
Query: 168 --PTATIPCLLPPSG-FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------ 212
P A P G + IH ++ L++DNL+DL H + H
Sbjct: 122 HLPWAEDPAWAYGGGLYHIHC--------DYRLMIDNLMDLTHETYVHASSIGQKEIDEA 173
Query: 213 ------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLS 256
TS F P K +GL D P+D F PP V+
Sbjct: 174 PPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLA---DDVPVDRWQICRFTPPSHVMI 230
Query: 257 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFM 312
+G++ G + + P + + M+ +F A + +
Sbjct: 231 EVGVAHAGNGGYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQI--- 287
Query: 313 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 372
R ++ EDL ++ QQ+ + + L + D GV R D L + L
Sbjct: 288 ----REGQGKIFAEDLEMLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERAL 343
Query: 373 PFMKPM 378
P +P+
Sbjct: 344 PAGRPV 349
>gi|442318048|ref|YP_007358069.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441485690|gb|AGC42385.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 363
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N WF + S +L D + P V+FRG+ G PG + + C HR PL LG V +
Sbjct: 22 LPNAWFILCTSRELGDKPL-SRTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVMQ 80
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 170
G++QC YHGW + T G+C +P + R+ + S EQ+G IW++ PG EP A
Sbjct: 81 GQLQCGYHGWRFDTGGQCRAIPGFLGEPEARSRCVTSYATREQDGFIWVYSTPGVEP--A 138
Query: 171 TIPCLLPPSGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
T P P + + ++ P L+N LD+ H + H F
Sbjct: 139 TEPYRFPLLDAREYTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLF 186
>gi|434402833|ref|YP_007145718.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257088|gb|AFZ23038.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 443
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 138/337 (40%), Gaps = 43/337 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+P++ D+ VP VI++ K V + C HR PL G V++ G
Sbjct: 11 WYPLSPIEDIAPQRPVPVTLLGIRLVIWKSKLSENYRVFLDQCPHRLAPLSEGRVDDKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 168
+ C YHGW++ G C +P + RN + SLP ++ ++W+WP +
Sbjct: 71 NLMCSYHGWQFDEQGICTHIPQAENPELVAKNQRNFCVVSLPVRQENDLLWVWPDADSTE 130
Query: 169 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 221
A P L P GF + + V +L + L++N+ D +H PF H + +
Sbjct: 131 LAANTPLPLSPQIDVKKGF-VWSSYVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRETA 189
Query: 222 VPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
P + + L + + F PPC + I + K G T
Sbjct: 190 TPIALNIIKSTENLIEASTAGRFQTTITFEPPCRLEYAISVPNSDKQLGLVT-------- 241
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRL------V 331
C+P S K R++ + +FA L F+ W H QVL+ D+ L +
Sbjct: 242 ---YCIPVSPGKCRIVAQFPRNFAKTLHR--FIPRWWNHIKTRNQVLDGDMILLHQQEYL 296
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
L Q++ + + LP D+L + +R W D +G
Sbjct: 297 LQQKQLSESWKTAYKLPTSADRLVIEFRNWFDKYCQG 333
>gi|113953594|ref|YP_731035.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CC9311]
gi|113880945|gb|ABI45903.1| cell death suppressor protein Lls1 homolog [Synechococcus sp.
CC9311]
Length = 440
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 40/311 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE-GR 118
W+PVA+ DL F E+ V++ G ++ C HR PL G +NE G+
Sbjct: 9 WWPVAYLRDLDRTRPQRFTLLEQDLVLWWDAPGQCWRAFEDVCPHRLVPLSEGRINEAGQ 68
Query: 119 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 167
++CPYHGW + G C +P ++ + S P +G++++W G D
Sbjct: 69 LECPYHGWSFDGQGTCRAIPQMGERARSESKRTGCGSFPTATGQGLLFVWSGTASAADSA 128
Query: 168 PTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
+P L IV +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 ALPLVPVLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAS 188
Query: 224 SLVKFLT--PASGLQGYWDPYPI-------DMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
+ +T + G + +W P D FR P ++ + T +
Sbjct: 189 PVEAVITREDSQGFEAFWQEGPRRGKLGSQDTHFRAPQLMWHDL------------TAKG 236
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDF-ASVLKHVPFMQYLW-RHFAEQVLNEDLRLVL 332
+ + +P SR K RL R F A+ + + ++ W +H + ED ++ L
Sbjct: 237 FARILTVVYAVPISRGKCRLFARFPFQFKAAAPRLLVGLRPRWLQHIGNHKVLEDDQVFL 296
Query: 333 GQQERMNNGAN 343
QER+ A
Sbjct: 297 HWQERVLETAG 307
>gi|416979262|ref|ZP_11937843.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
gi|325519917|gb|EGC99179.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
Length = 359
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D ++ E V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKLLGRKICGESMVFYRTADGSVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E DGK MP ++ I+S P E+ G IW+WPGD T P
Sbjct: 62 GTLVCGYHGLEMGCDGKTTGMPGQRVGGFPAIRSFPAIERYGFIWVWPGDA--TRADPAK 119
Query: 176 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LHHLPWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|397735423|ref|ZP_10502121.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396928725|gb|EJI95936.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 345
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ A+S DL ++ E P V++R DG+ + + C HR PL G +N+
Sbjct: 4 LKNAWYMAAWSQDLGVGKLLSRTIIEVPVVLYRSNDGVAHALMDRCPHRFAPLSRGELND 63
Query: 117 GRIQCPYHGWEYSTDGKCEK--MPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATI- 172
I C YHG E+ DG C + PS ++ + + + P E++ + WIW GD P +
Sbjct: 64 RGIACGYHGLEFDHDGVCIRNPHPSGKIPKRAHVNAYPVVERDTIAWIWMGDRDPDEDLI 123
Query: 173 ---PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L +G ++M+ + L++DNLLD +H F H
Sbjct: 124 PDYSILTKSNGVTRRDYLLMDASFD--LIVDNLLDCSHTSFLHKGVLG 169
>gi|443312467|ref|ZP_21042084.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442777445|gb|ELR87721.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 338
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+ FW+P +T+L + PF+ E VI+ K G P VQ+ C HR+ L +G V +
Sbjct: 9 LRKFWYPAIPTTELSNSPN-PFELLGEKIVIWLDKAGKPAAVQDRCCHRSAQLSIGKVVD 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
G I C YHGW++++DG C +P T N KIKS C E+ G +W+ E P +
Sbjct: 68 GNICCAYHGWQFNSDGACVCVPQLKDETIPANYKIKSYRCTERYGYVWVCL--EEPLIDL 125
Query: 173 PCLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKFL 229
P + + + + E +++N DLAH F HT+TF ++ +P +K
Sbjct: 126 PEIDEATKPDYRLLHEFYELWKCAALRVMENEFDLAHPTFVHTTTFGSEEHPIPESMKLT 185
Query: 230 TPASGLQ 236
GL
Sbjct: 186 ETEWGLH 192
>gi|374369367|ref|ZP_09627399.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
gi|373099109|gb|EHP40198.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
Length = 345
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 126/335 (37%), Gaps = 41/335 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ + ++ + M P V++R + G +++ C HR PL +G
Sbjct: 3 IKNTWYVAGWDKEIPAEGMFSRTIIGVPVVMYRKEHGGIVALEDRCCHRGAPLSVGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHG ++ + GKC + P+ + K++ P EQ +WIW GD P P
Sbjct: 63 DCIRCMYHGLKFDSAGKCIEAPAQERIAPQAKVRKFPTVEQHRWVWIWMGD--PDKADPS 120
Query: 175 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 219
L+P + + H E + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTQWLDHPEWRSLDGYIHYDVNYLLICDNLLDFSHLPFVHPTTLGGSEDYAAVRPKV 180
Query: 220 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
W++ P+ K + G W+ Y F P ++L G+S G
Sbjct: 181 ERIDGGVRITRWAINTEAPAFAKAVKAYPGKVDRWNIY----NFTIPAILLMDSGMSPTG 236
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
R A P + T + +FA P +
Sbjct: 237 TGAPAGVRVDAAEFRGCQAITPETENSTHYFFAHPHNFAI---DRPEVTASIHQSVVTAF 293
Query: 325 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ED ++ QQ + +P D ++R
Sbjct: 294 DEDREIISAQQRSLALEPGFKMMPFSIDAALSQFR 328
>gi|260221223|emb|CBA29571.1| Vanillate O-demethylase oxygenase subunit [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 351
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A S ++ D + P +FR G+ V++ C HR PL LG V
Sbjct: 5 NTWYVAARSEEIPSDRPLGRRICNIPMALFRNSAGVSAAVEDFCPHRGAPLSLGKVEGDT 64
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 175
+ C YHG DGK MP + R I+S P E+ G +W+WPGD + A+IP
Sbjct: 65 LVCGYHGLAMGCDGKTVSMPCQRTRGFPAIRSFPIHEEHGFVWVWPGDAAKADVASIPKF 124
Query: 176 L----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P G+ + E+ ++ L++DNL+DL H + H+++ +
Sbjct: 125 EWLGNPQFGY---GGGLYEIACDYRLMIDNLMDLTHETYVHSTSIGQ 168
>gi|339503621|ref|YP_004691041.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338757614|gb|AEI94078.1| putative vanillate O-demethylase oxygenase subunit [Roseobacter
litoralis Och 149]
Length = 356
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 31/267 (11%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T ++N W+ A+ST++ DD + F +P ++FR DG +++ C HR PL +G
Sbjct: 2 TTLVRNAWYVAAWSTEI-DDELRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGK 60
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
+QC YHG + TDGKC ++P + + + P E+ G++WIW G EP A
Sbjct: 61 RIGDTVQCGYHGLTFDTDGKCVRVPGQDRIPLSACVDAYPIEERSGIVWIWMG-EPERAN 119
Query: 172 IPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPS 224
+ F +H + + + + +NL+D AH F H +T S VP
Sbjct: 120 PDDIFDLPQFHDDSWHMHHGGALHIESNYLNVAENLVDPAHVSFVHETTLGNSASENVPV 179
Query: 225 LVK-------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
V F G G D + R PC G + +
Sbjct: 180 HVSTEGEEIIAWRWIRDSEPIGFFKAFGGFTGNVDRWHY-YHLRLPCTAYIDFGSADATR 238
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKT 292
++ R T + LH P + T
Sbjct: 239 EIAEDDRDSGTRILALHFMTPVTETYT 265
>gi|443314552|ref|ZP_21044102.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
gi|442785849|gb|ELR95639.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
Length = 474
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 134/327 (40%), Gaps = 33/327 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 118
W+PV + DL F + VI+ V N C HR PL G +NE G+
Sbjct: 43 WYPVHYVEDLDPQRPTRFTLLGQDLVIWWEPQAKAWRVFANQCPHRLAPLSEGRINEAGQ 102
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-------SLPCFEQEGMIWIWPG--DEPPT 169
++CPYHGW +S G CE++P + SLP ++G+++++PG + P
Sbjct: 103 LECPYHGWTFSGSGACEQIPQQSPETAAHRSPRACAHSLPTAVRQGLLFVYPGRVENAPQ 162
Query: 170 ATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW-SVPS 224
+P + P G+ + +LP + LL+N+LD +H P+TH T K + P
Sbjct: 163 VPVPIIEAVEAEPEGW-VMLNTFRDLPYDALTLLENVLDASHIPYTHHKTVGKRENAAPM 221
Query: 225 LVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHV 283
+ + P G QG W P R + + PG + T + +
Sbjct: 222 EMTVIDPGKQGFQGLWPEGP-----RKGKLGTQSTRFVAPGLMYHDLTSKQFGRTLTVVY 276
Query: 284 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAEQVLNEDLRLVLGQQERM-- 338
P + + RL R F+S L F+ + R H + ED ++ L QER
Sbjct: 277 ATPIRKGECRLFARFPFKFSSPLPRF-FIGVIPRWLSHIGNNGVLEDDQIFLHLQERFLA 335
Query: 339 ----NNGANVWNLPVGYDKLGVRYRLW 361
A LP D+ +R W
Sbjct: 336 QAGDQPYAQTCYLPTQADRYVTAFRQW 362
>gi|218439920|ref|YP_002378249.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218172648|gb|ACK71381.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 367
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 32 LDIVKGKLPRKSLNVSGPVQPYNTRLK------NFWFPVAFSTDLKDDTMVPFDCFEEPW 85
+ + K +L ++ QP R++ N+W+PVA+S LK ++P +++
Sbjct: 1 MSVRKSELLNMESTITLSSQPVQNRVREIGINPNYWYPVAWSHQLKPCQILPVVVWQQAI 60
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQ 141
++R + ++N C H+ G V E + CPYHGWE++ +G+C K+ P +
Sbjct: 61 AVYRDVNHQLHALENACPHKGVVFDKGEVFETHLVCPYHGWEFNGEGECVKIPYLPPEQK 120
Query: 142 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP----IEHGL 197
L K ++ P E+ G+IWI+PGD P A + + + +++E+P +
Sbjct: 121 LPCAKARNYPIQEKYGIIWIFPGD-PSLAELKTIPDVPEYNESEWLIVEIPAHFQAHFSI 179
Query: 198 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY-------WDPYPIDMEFRP 250
+N +D+ H F H +GW P L + + + W +++
Sbjct: 180 CNENTMDVFHG-FLHRDI--QGWFNPILTQLKAKKNTVHAQYQVSYRGWLSKFLNLNKDE 236
Query: 251 PCMVLSTIGISKP-----GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL-DFAS 304
+ T+ I+ LEG ++ +L +L V L +R + L ++ L +
Sbjct: 237 NQVTTRTVSITYNYPHYHSTLEGVSS----LYLMRLPVSLTETRSFSLLFIKLRLPKWVV 292
Query: 305 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 336
L Q +W ++ L++D+ ++ +Q+
Sbjct: 293 NLIRGQLSQIIWHFLFKKFLDQDIEMIESEQQ 324
>gi|282900953|ref|ZP_06308886.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
gi|281194044|gb|EFA69008.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
Length = 354
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 16/194 (8%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N L+N W+ S+ LK MV +EP + R K+G +++ C HRA PL G
Sbjct: 6 NILLRNLWYYALPSSQLKTGKMVSRVLLKEPILFTRDKNGQVFAIEDICPHRAVPLSCGR 65
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 166
+ +++C YHGW +++ GKC ++P S L +KS P +E +G IWI+ D+
Sbjct: 66 FDGEQVECCYHGWRFNSQGKCTEIPSLLPEQSIDLSRFNVKSYPVYETQGNIWIYMYDKE 125
Query: 167 -PP----TATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP IP + S E VM+ P I+H + L+D AH+P+ H + +
Sbjct: 126 GPPINAEIGDIPQVPGFSNREPDLVEVMKFPCFIDHA--VTGLMDPAHSPYVHQVWWWRS 183
Query: 220 WSVPSLVKFLTPAS 233
+ VK P+
Sbjct: 184 GKLHEEVKQFDPSD 197
>gi|312199684|ref|YP_004019745.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311231020|gb|ADP83875.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 373
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++ W PVA ST+L D+ + EPWV+ R +G+ ++ C HR PL G V+
Sbjct: 14 LRHGWHPVALSTELGDEPLA-VRLLGEPWVLAR-LNGVLTAFEDRCPHRLAPLSAGRVDG 71
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CPYHGW Y+ DG C +P+ R + E+ G++WI P DEP
Sbjct: 72 ETLVCPYHGWRYAADGGCTLVPALGPGVPAPRRARATTAWGVTERHGLVWIAP-DEPFAE 130
Query: 171 TIPCLLPPSGFEIHAEIVME---LPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ LP +G + +E GLL DN LD AH PF H +T
Sbjct: 131 IL--ALPEAGEDGFDSTWLEPARSTAAAGLLADNFLDTAHFPFVHAATIGD 179
>gi|428219240|ref|YP_007103705.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991022|gb|AFY71277.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 360
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
KNFW+ V FS D +T F + + ++R G + N C HR L G+VN+
Sbjct: 2 FKNFWYAVEFS-DRISETPCLVKAFNQEFAVYRTAAGKVLAMDNRCVHRGAALANGTVND 60
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD-----E 166
+ CPYHGW++ + GKC +P+ K+ + E+ G IW++ GD
Sbjct: 61 NCLTCPYHGWKFDSSGKCVDIPANPAGMSIPNRAKVSTYDVVEKYGWIWLFWGDLPIDER 120
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
PP +P P I + E +++N LD+AHAPF H F
Sbjct: 121 PPIPELPHFYNPDLKAISGDFNWSANYER--IVENGLDIAHAPFVHAGAFGN 170
>gi|300313279|ref|YP_003777371.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum seropedicae SmR1]
gi|300076064|gb|ADJ65463.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 349
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +RG G V++ C HR PL LG V EG
Sbjct: 4 KNAWY-VACTPDEIDSKPLGRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFVREG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
++ C YHG E DGK MP ++R I+S P E+ G IW+WPGD+ A I
Sbjct: 63 QLVCGYHGLEMGCDGKAISMPGQRVRGFPCIRSYPVEERYGFIWVWPGDKEQADPAQIHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEGE 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 264
TS F P + +GL D P+D F PP V+ +G++ G
Sbjct: 183 QVITSRFMDNIMPPPFWRMALRGNGLA---DDVPVDRWQICRFSPPSHVMIEVGVAHAG 238
>gi|347528273|ref|YP_004835020.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136954|dbj|BAK66563.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 363
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 47/278 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A++ ++ + + + VI+R + +++ C HR PL G V E
Sbjct: 5 LRNAWYASAYADEIGERPLAR-KLLDRDMVIYRDAEKQLAVLEDRCPHRFAPLSGGKVIE 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGD-----EP 167
G IQCPYHG + G C P + L+ + + P E+ G++WIWPGD E
Sbjct: 64 GTIQCPYHGLRFDRTGACTHNPHMKGGGPLKAASVAAWPVLEKYGIVWIWPGDPERARED 123
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
I L P F + + ++ + + L++DNLLDL+HA + H +S L+
Sbjct: 124 ALPRIDFLERPKDFSV-VKGLLHVRGHYELVVDNLLDLSHAAYIHPQFAGGQYSSEELLA 182
Query: 228 ---------------------FLTPAS--GLQGYWDPYPI----DMEFRPPCMVLSTIG- 259
PA+ L G+ P+ M + PP M+ +G
Sbjct: 183 ATKQKLERRERSIVNHRIRSGLAAPAAHQALFGFDAQTPVHSESTMTWHPPAMLDFAVGS 242
Query: 260 -ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
I K EG H+ QLH P + + +
Sbjct: 243 WIDGTPKEEG-------AHIPQLHFITPETEFSSHYFF 273
>gi|238059738|ref|ZP_04604447.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
gi|237881549|gb|EEP70377.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
Length = 347
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 37/278 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
++ W+ A+ +++ ++ EP V++R G + + C HR PL ++
Sbjct: 5 RDQWYVAAYGSEVGRG-LLARTVLGEPLVLYRTGAGAAVALADRCVHRRYPLSESRLDGD 63
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT--ATIP 173
I C YHG+ Y G C +P Q R ++ S P EQ+ IW+W GD ATIP
Sbjct: 64 TIVCGYHGFTYDPTGACVFVPGQQRIPRTARVTSYPVVEQDSFIWVWIGDRDRADPATIP 123
Query: 174 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TSTFA 217
L G+ + + L +GLL+DNL+DL+H + H T+
Sbjct: 124 RAPWLADPGYAV-VRGMAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEVD 182
Query: 218 KGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK--- 265
+ + + + F ++G+QG + D+E+ PPC+ L I+ G
Sbjct: 183 EDRGIVYVSRHMDDAECPPFYARSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPRGVHPP 241
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
EG+++ A H ++ PS+ T + ++ DFA
Sbjct: 242 AEGEDS--AAFHAEIVYAITPSTEHTTYDFWAVARDFA 277
>gi|254249888|ref|ZP_04943208.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124876389|gb|EAY66379.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 359
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRTADGQIAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|254514746|ref|ZP_05126807.1| vanillate demethylase A [gamma proteobacterium NOR5-3]
gi|219676989|gb|EED33354.1| vanillate demethylase A [gamma proteobacterium NOR5-3]
Length = 346
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 44/337 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S +++ + C + V+FR +G +++ C HR PL LG+V G
Sbjct: 9 KNCWYVAATSDEIEAKPLGRIVCGKS-MVLFRAAEGQVAALEDFCPHRGAPLSLGTVANG 67
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTAT--IP 173
+ C YHG + DGKC M + + + I++ P E+ G IW+WPGD IP
Sbjct: 68 LLVCGYHGMRMNADGKCAGMAGQSVEHFRKGIQTYPAIERHGYIWVWPGDAALANADLIP 127
Query: 174 CL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVP--- 223
L P F + + ++ LL+DNLLDL H + H S+ + + P
Sbjct: 128 DLHWARSPDWAF---GGGMFHIRCDYRLLIDNLLDLTHETYVHASSIGQPEIEEAAPDTL 184
Query: 224 ------SLVKFL--TPA-----SGLQG-YWDP-YPIDM----EFRPPCMVLSTIGISKPG 264
S+ +F+ PA L+G DP P+D F PP V+ +G++ G
Sbjct: 185 RKDHHVSVSRFMEDIPAPPFWQDALKGNNLDPDLPVDRWQVCRFSPPGSVMIDVGVAHAG 244
Query: 265 K--LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
+E R+ + + + + P + + M+ +F + + + R +
Sbjct: 245 HGGIEAPVERRASGIV--VDLITPETETSCWYFWGMARNFN--VTDLALTDSI-RDSQLK 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ EDL ++ QQ + + + D+ GV R
Sbjct: 300 IFTEDLEMLESQQRNLEANPERRLMSLNIDRGGVEAR 336
>gi|427725393|ref|YP_007072670.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427357113|gb|AFY39836.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 439
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 44/331 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+PVA DL +P VI++ + V + C HR PL G ++E
Sbjct: 10 WYPVALLEDLDPSAPKAITILGKPLVIWKPRAQQKYSVFLDKCPHRLAPLSEGRIDEKSD 69
Query: 118 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP- 168
R+ C YHGWE+ G C+++P + N + S P ++ ++W+W + P
Sbjct: 70 RLMCSYHGWEFDEAGSCQRIPQLGQPEILEKRRDNFCVVSFPVQTEQDLLWVWLDETTPD 129
Query: 169 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH-----TSTFA 217
A +P L P+ GF + + ++ + L++N++D +H PF H A
Sbjct: 130 LAAEMPLPLSPNISETKGF-VWSTYARDVDYDWTTLVENIVDPSHVPFAHHGLQGKREMA 188
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
K + + +T G + ++ F+PPC+V I GK G T
Sbjct: 189 KPLTFEIISSEMTCIEG--KVTSGFKTNITFKPPCLVEYEIPFPS-GKQVGLVT------ 239
Query: 278 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 337
C+P+S K RL+ +FA L + + R V++ D+ ++L +QE
Sbjct: 240 -----YCVPTSPGKARLIAFFVRNFAKQLGRLIPRWWEHRQTRNAVIDSDM-IILQRQEY 293
Query: 338 MNNGA-----NVWNLPVGYDKLGVRYRLWRD 363
N+ + + + +P D+ + +R W D
Sbjct: 294 FNHQSSESWKDAYKMPAEADRFVIEFRRWFD 324
>gi|78184439|ref|YP_376874.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
gi|78168733|gb|ABB25830.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
Length = 438
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 50/310 (16%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIF---RGKDGIPGCVQNTCAHRACPLHLGSVN-E 116
W+P+A+ DL F E VI+ + + + C HR PL G +N E
Sbjct: 9 WWPIAYLQDLDRRQPNRFTLLERDLVIWWDAQAEQHSWRVFPDVCPHRLVPLSEGRINDE 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD----- 165
G ++CPYHGW + +G C +P + R + SLP +G++++W G+
Sbjct: 69 GLLECPYHGWSFDGEGHCRSIPQATDNTKPEARRSRCSSLPTATGQGLLFVWTGEPDSAN 128
Query: 166 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
+ P +P L + +LP++ LL+N+LD++H PFTH T + +
Sbjct: 129 QHPLPLVPALEEDPTSWTLQDTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGNRNNASPV 188
Query: 226 VKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--HQL 281
+ +T + G +W+ P + GKL Q TR A L H L
Sbjct: 189 LATITREAEDGFDAFWEEGP------------------RRGKLGSQTTRFQAPQLMWHDL 230
Query: 282 HV-----------CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNEDL 328
+P R + RL R F S K + ++ W +H + ED
Sbjct: 231 TAKGFARILTVVYAVPIRRGECRLFARFPFQFQSAAPKLLIGLRPRWLQHIGNHKVLEDD 290
Query: 329 RLVLGQQERM 338
++ L QER+
Sbjct: 291 QVFLHWQERV 300
>gi|323358581|ref|YP_004224977.1| phenylpropionate dioxygenase [Microbacterium testaceum StLB037]
gi|323274952|dbj|BAJ75097.1| phenylpropionate dioxygenase [Microbacterium testaceum StLB037]
Length = 369
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 54/358 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NE 116
+N W+ A+ ++ ++ P ++R +DG + + C HR PL G++
Sbjct: 14 RNAWYVAAWDHEVGRKKILARTVAGRPLALYRTEDGRAVALADACWHRLAPLSQGTLMGP 73
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+CPYHG Y + G+C MP+ + N + S P ++ +W+W GD P P
Sbjct: 74 EDIRCPYHGITYDSRGRCTSMPAQETINPSALVPSFPVVDRYRYVWVWVGD--PALADPD 131
Query: 175 LLPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
L+P G IHA P + L+LDNL+DL H F H+S+ K S
Sbjct: 132 LIPDMHQMTDAAWTGDGLTIHA------PCNYQLILDNLMDLTHEEFVHSSSIGQKELSE 185
Query: 223 PSLVKFLTPAS-------------------------GLQGYWDPYPIDMEFRPPCMVLST 257
V T + G G D + I + F P +
Sbjct: 186 SEFVTSHTDTTVTVERWMHDIEAPPFWLKNMRDKFPGFSGRVDRWQI-IHFEAPSTICID 244
Query: 258 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 317
+G++K G + R + + ++ P + + + + ++ + + R
Sbjct: 245 VGVAKAGTGAPEGDRSQGVNGYVMNTITPETARSSHYFWSFQRNYRLDSQ---LITTQLR 301
Query: 318 HFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 373
V ED ++ QQ + N ++L + + VR L R L +G P
Sbjct: 302 DGVHGVFGEDEAMLAAQQAAIDANPDYEFYSLNIDAGGMWVRRILERMLLAEGRDHAP 359
>gi|81300844|ref|YP_401052.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
gi|81169725|gb|ABB58065.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
Length = 345
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 136/340 (40%), Gaps = 43/340 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN+W+PVA + + D + C E ++R G + + C HR L G V
Sbjct: 3 LKNYWYPVALAQKVGDRPLSVTLC-GEAIALYRDSAGQIHALSDRCVHRGAALSGGWVEN 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPG-----DE 166
+ CPYHGW+Y G C K+P+ + K+ E+ G++W++ G D
Sbjct: 62 DCLVCPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADR 121
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--------- 217
PP +P P+ + E+ + + +NL+D AHAPFTH+ +F
Sbjct: 122 PPLPPLPEYDDPAWRTVQGEVTYT--THYTRVTENLMDFAHAPFTHSGSFGAASDPLIEP 179
Query: 218 -KGWSVPSLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
K +P ++ T S +G W + P V +TI + P + +
Sbjct: 180 YKVEQLPDGLRAQTQFTKSAYRGIWKLF---NRGDAPRTVTTTITLYMPCIVRTETDLGN 236
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR-----HFAEQVLNEDLR 329
LP + T+ + L F W + +++ ED R
Sbjct: 237 GFRFIGYGANLPIDAETTKTFW---------LTVRTFFTGAWADGDTVRRSLKIIEEDKR 287
Query: 330 LVLGQQERMNNGANVWNLPVGYDKLGVRYR-LWRDALEKG 368
+V Q+ +M + V D L + YR L R A ++G
Sbjct: 288 IVETQRPKMIPLDDRSETHVAADALQIGYRNLLRQARDRG 327
>gi|347528258|ref|YP_004835005.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136939|dbj|BAK66548.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 351
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ +S D + EP V++R +G +++ C HRA PL G
Sbjct: 3 VRNCWYMAGWSKDFTGTDVQSVSILNEPLVMYRADNGSLVALEDRCPHRAAPLSKGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATI 172
++C YHG + DG C +P + ++V ++S E++G W+W G D A I
Sbjct: 63 NDLRCMYHGIMFGPDGACTDLPGQPVIPKSVCVRSYNVIEKDGCAWVWMGEADRLDFALI 122
Query: 173 PCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P + P + + +++ E LL+DNLLD++HAP+ H +TF
Sbjct: 123 PNFIGPDHPDWAITQSQLDIDAEGQLLIDNLLDVSHAPYVHEATFG 168
>gi|134292215|ref|YP_001115951.1| vanillate monooxygenase [Burkholderia vietnamiensis G4]
gi|134135372|gb|ABO56486.1| Vanillate monooxygenase [Burkholderia vietnamiensis G4]
Length = 359
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + E V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGRVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAAMPGQRVGGFPAIRSFPVVERYGFVWVWPGDA--SRADPAA 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 LPALTWADDPVWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|307153246|ref|YP_003888630.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
gi|306983474|gb|ADN15355.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
Length = 482
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 145/340 (42%), Gaps = 30/340 (8%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHR 105
+G + P + W+P+ + DL F + VI+ K+ V + C HR
Sbjct: 37 AGGLDPTRFDPQEAWYPIHYVKDLDKTKPTSFTLLDRKLVIWWDKNADQWRVFDDQCPHR 96
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP----STQLRNVK---IKSLPCFEQEG 157
L G +NE G I+CPYHGW +S GKCE +P T+ + K + SLP +G
Sbjct: 97 LALLSEGRINEEGLIECPYHGWTFSGSGKCEFIPQQPQGTKAEDSKRACVNSLPVSVCQG 156
Query: 158 MIWIWPG--DEPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+++ +PG + P +P + P SG + + +LP + +L+N+LD +H P+TH
Sbjct: 157 LLFTYPGNPENAPKVRVPIIEPLEDNSGEWVCIDTFRDLPYDALTVLENVLDSSHVPYTH 216
Query: 213 TSTFA-KGWSVPSLVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
T + + P ++ + G G W+ P + TI I+
Sbjct: 217 HGTVGNRQNAAPVELEIVKSGREGFIGAWEEGPR----KGTLGRQDTIFIAPNFMYHDLT 272
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDL 328
++Q L ++ P S+ K RL R FA+ L + + H + + ED
Sbjct: 273 SKQFGRTLTVVYAT-PISKGKCRLFARFPFKFAAKLPGLFINLTPRWYSHTNQNTILEDD 331
Query: 329 RLVLGQQERM---NNGANVWN----LPVGYDKLGVRYRLW 361
++ L QER G+ +N LP D R W
Sbjct: 332 QIFLHYQERFLEQAGGSQKFNKAFYLPTKADTYVSALRQW 371
>gi|218440057|ref|YP_002378386.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218172785|gb|ACK71518.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 442
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 142/343 (41%), Gaps = 45/343 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVN--EG 117
W+P++ DL P VI++ + C HR PL G ++ G
Sbjct: 11 WYPLSPVEDLDPKRPTPVTLLGLRLVIWKPPSSDTYQVFIDQCPHRLAPLSEGRIDPKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 168
+ C YHGWE+ T G C+++P + ++ ++ P ++ ++W+WP +
Sbjct: 71 YLMCSYHGWEFDTQGTCQRIPQAEKPEIVQEKVQQWCVRVFPTRQENDLLWVWPDENSAE 130
Query: 169 -TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 219
A+ P L P GF + + +V +L + L++N+ D +H PF+H K
Sbjct: 131 LAASTPLPLSPLLDAKKGF-VWSSMVRDLDYDWQTLVENVADPSHVPFSHHGIQGDREKA 189
Query: 220 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
VP + P + F PPC + I + GK G T
Sbjct: 190 RPVPIKIIESLPHRIQATVEIRKGTTITFEPPCHLEYNISVGDQGKQVGLVT-------- 241
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLV------ 331
C+P K+R++ + +FA H+ W H E+ VL+ D+ L+
Sbjct: 242 ---YCIPVMPGKSRIVAQFPRNFAKTFHHL--TPRWWNHIMERNAVLDGDMILLQQQEYF 296
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
L Q+E+ + + +P D+L +R W D +G QLP+
Sbjct: 297 LRQREQQESWKTAYKMPTSADRLVTEFRNWFDKYCQG--QLPW 337
>gi|409096514|ref|ZP_11216538.1| Rieske (2Fe-2S) domain-containing protein [Thermococcus zilligii
AN1]
Length = 319
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 38/325 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
WF + S +++ D V F V++R ++G ++++C HR L G V GR+Q
Sbjct: 2 WFAILSSKEVRKDRPVGVVRFGRNIVLWRDENGKVNAIEDSCVHRRARLSAGKVINGRLQ 61
Query: 121 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
CP+HG+EY DG+ + +P+ +K+ E+ GMIW+W G+ P
Sbjct: 62 CPFHGFEYDGDGRVKLIPALGRSYRVPERFSVKAYNVAEKAGMIWMWFGEGEPGGEPRFF 121
Query: 176 LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGL 235
AEI + ++N LD+ H PF H +T +G T +G
Sbjct: 122 EDIDKKFACAEIQETWNVPFPRAVENQLDVMHLPFVHRTTIGRGNR--------TLVNGP 173
Query: 236 QGYWDPYPIDME---FRPPCMVLSTIGISKPGKLEGQNTR-------------QCATHLH 279
W ID + F V KPG+LEG +R + +
Sbjct: 174 VVKW----IDGDSFVFYVFNEVDRGQIAKKPGELEGLESRVYLEFIFPNVWQNHISEKVR 229
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 339
+ +P +++KT + R + + + L F + VL++D R+V Q+ +
Sbjct: 230 VVAFFVPVTKEKTMIYLRFYIKATGIRPLDRLIAKLGMRFNKVVLHQDRRVVETQEWDIR 289
Query: 340 NGANVW-NLPVGYDKLGVRYRLWRD 363
+ V +LP+ + R RL+R+
Sbjct: 290 KDSLVQGDLPI----MEFRKRLYRE 310
>gi|358455131|ref|ZP_09165359.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357081384|gb|EHI90815.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 367
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+++W+PVAF++DL + V++R +G P C + C HR L G +
Sbjct: 16 LRHYWYPVAFASDLGGAPLA-RRLLGTDVVLWRDAEGRPACAADRCPHRDAKLSRGWTED 74
Query: 117 GRIQCPYHGWEYSTDGKC----EKMPSTQLR-NVKIKSLPCFEQEGMIWIW--PGDEPPT 169
G + CPYHGW Y +DGKC + P ++ + + P E G++W+ P EP T
Sbjct: 75 GAVVCPYHGWRYGSDGKCVLIPQNAPGQRISPRAVVATYPVTEALGLLWVCLDPASEPAT 134
Query: 170 A-----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
A IP P G+ + E P LLDN LD AH F H TF
Sbjct: 135 AMAGIPAIPQFGQP-GWRVVQEFDTVWPCSAPHLLDNNLDPAHIAFVHRRTFGN 187
>gi|434388981|ref|YP_007099592.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019971|gb|AFY96065.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 321
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ V F + + + V++R DG + N C HR L G +
Sbjct: 3 KNLWYAVEFCNAIGTSPKL-LKILDRELVLYRTADGRIRAIDNNCIHRGAALANGWIEND 61
Query: 118 RIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDE-----P 167
I CPYHGW+Y TDG C K+PS T + K+ P E+ G IW++ GDE P
Sbjct: 62 CIVCPYHGWQYQTDGTCSKIPSQAATATIPKPAKMAVYPVGEKYGWIWLFLGDEMAGEIP 121
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P L + I E E +L+N LD AHAPF H+ F
Sbjct: 122 TIPNFPQLESDAIRSIQGEFYWNANYER--VLENGLDFAHAPFVHSGAFGN 170
>gi|421896325|ref|ZP_16326722.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
gi|206587490|emb|CAQ18072.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
Length = 342
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG +G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGPEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 172
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 173 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 219
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEG 181
Query: 220 WSVPS--LVKFLTP----ASGLQG--YWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 182 DTVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|119493134|ref|ZP_01624040.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119452788|gb|EAW33964.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 443
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 138/341 (40%), Gaps = 51/341 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+P++ DL P VI++ K V + C HR PL G V+E G
Sbjct: 11 WYPLSPVEDLNPQQPTPVTLLGINLVIWKPKSSQTYQVFLDECPHRLAPLSEGRVDENTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIW--PGDEP 167
+ C YHGWE+ +G C +P S N P E ++W+W P
Sbjct: 71 NLMCSYHGWEFDQNGICTSIPQAEKPEIVSKNKENFCATQFPTQEANDLLWVWADPNSSE 130
Query: 168 PTATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 221
A P L P GF + + V +L + L++N+ D +H PF H +
Sbjct: 131 QAAKTPLPLSPQIDASQGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRKKG 189
Query: 222 VPSLVKFLTPASGL-----QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 276
P +K + L QG+++ + F PPC + I GK G T
Sbjct: 190 SPIHLKIIESNLNLIEAKYQGFFN---TKITFEPPCRLEYAIEFGSDGKQVGLVT----- 241
Query: 277 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQ 334
CLP S K+R++ + + +F+ L + + W H + VL+ D+ + L Q
Sbjct: 242 ------YCLPVSPGKSRIVAQFTRNFSQRLNKI--IPRWWEHVKTRNLVLDGDM-IFLHQ 292
Query: 335 QERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
QER+ + + LP D+L + +R W + G
Sbjct: 293 QERLLQQKQKTESWKTAYKLPTEADRLVIEFRKWFEQYSGG 333
>gi|166365800|ref|YP_001658073.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
gi|166088173|dbj|BAG02881.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
Length = 460
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGFIYHDLTSEKFGRTLTA 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|312960145|ref|ZP_07774657.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285639|gb|EFQ64208.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 357
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
+ L N W+ ++ +L M+ E+P V FR G+ + + C HR PLH G V
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRDSHGVIQALADRCPHRFAPLHRGKV 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDE--PPT 169
+QCPYHG + G+C P + K ++ E+ G IW+WPGD
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGEGNIPKAACVRGFAAVERHGAIWVWPGDRHLASD 121
Query: 170 ATIPCLLPPSGFE---IHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 219
A IP S FE HA+ LP + LL DN++DL+H F H T G
Sbjct: 122 ALIPDF---SFFEQAPTHAKGHGYLPTRAHYELLSDNIMDLSHVDFLHPDTLGGG 173
>gi|386335217|ref|YP_006031387.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
gi|334197667|gb|AEG70851.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
Length = 342
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG +G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGPEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 172
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPARIH 121
Query: 173 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 219
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEG 181
Query: 220 WSVPS--LVKFLTP----ASGLQG--YWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 182 DTVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|440696445|ref|ZP_20878913.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
gi|440281329|gb|ELP68959.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
Length = 354
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 37/286 (12%)
Query: 52 PYNTRL-KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPL 109
P+ T +N W+ A+S ++ + ++ EP V +R +D G P + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGRE-LLGRTILGEPLVFYRTEDEGTPVALADRCVHRRYPL 60
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP 167
++ RI C YHG+ Y T G C +P + R ++ S EQ+ +IW+W GD P
Sbjct: 61 SESGLDGDRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYQVVEQDALIWVWIGD-P 119
Query: 168 PTA---TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------- 212
A TIP L G+ + + + + ++GLL+DNLLDL+H + H
Sbjct: 120 ALADADTIPRARHLDSPGW-VTVKGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVA 178
Query: 213 ----TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 259
+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 179 ETPINTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSR 237
Query: 260 ISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
I+ G L E + H + PS+ K + +S D+A+
Sbjct: 238 IAPVGVLPEADGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWAT 283
>gi|425442274|ref|ZP_18822528.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
gi|389716788|emb|CCH99015.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
Length = 460
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGFIYHDLTSEKFGRTLTA 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|330992786|ref|ZP_08316730.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
gi|329760264|gb|EGG76764.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL++FW+ F D F + V++R +DG P V + C HR+ L G+V
Sbjct: 10 RLRDFWY-CLFPMHELSDAPRAFRLLGQDIVVWRDEDGRPHAVIDRCPHRSARLSGGTVE 68
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
EGRI CPYHGW + DG+C +P + +K+L C E+ G +W+ PG+ P +
Sbjct: 69 EGRIVCPYHGWAFRGDGRCVSVPQSVTNAGPQFGVKALHCTERYGQVWVCPGE--PAFDL 126
Query: 173 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
P + G+ E + +++N D AH F H +F P+
Sbjct: 127 PHVPHFEKPGYRQIFEFSEDWACSAQRIIENEFDTAHFSFVHKGSFGDSDPAPARTDITE 186
Query: 231 PASGL 235
+G
Sbjct: 187 TETGF 191
>gi|170737389|ref|YP_001778649.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819577|gb|ACA94159.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 359
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 132/343 (38%), Gaps = 43/343 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRTADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG + +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLKMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 212
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 213 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 262
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDIPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + P + + M+ +F P + R +
Sbjct: 237 AGHGGYDAPPNKKASSIVVDFITPETDTSIWYFWGMARNFRP---DDPALTAEIREGQGK 293
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
+ EDL ++ QQ + L + D GV R D L
Sbjct: 294 IFAEDLEMLERQQRNLEQWPERTLLKLNIDAGGVLSRKVIDRL 336
>gi|393778405|ref|ZP_10366679.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
gi|392714676|gb|EIZ02276.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
Length = 372
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 115
++N W+PV FS + K + ++P VI+R +G + C H+ PL ++
Sbjct: 7 VRNTWYPVGFSHEFKAGDLQGLKVADKPIVIWRTAEGEVVAFDDRCCHKRFPLSESKLLD 66
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 171
+GR++C YHG Y + GKC ++PS + + ++ ++P EQ+G++W+WPGD +T
Sbjct: 67 DGRLECAYHGLCYDSSGKCVEIPSQPDKAIPPQARLHTVPIKEQDGVVWLWPGDVEQAST 126
Query: 172 I-----PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 207
+ P L S + +E P + LL++NLLD++H
Sbjct: 127 LNPPRTPELTDTSCVTAVSPERIEAPANYLLLIENLLDISH 167
>gi|186686519|ref|YP_001869715.1| pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
gi|186468971|gb|ACC84772.1| Pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
Length = 482
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 36/343 (10%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 105
+G + P + + W+PV + DL PF E+ V++ K+ + C HR
Sbjct: 27 AGGLDPDSFDCQEVWYPVCYIEDLNKSQPTPFTLLEQNIVLWWDKNEQTWRAFIDQCPHR 86
Query: 106 ACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQE 156
PL G +N EG ++CPYHGW +S GKCE +P Q++ K + +L +
Sbjct: 87 LAPLSEGRINHEGWLECPYHGWAFSGTGKCEFIPQ-QIQRTKAEVSQRACVATLATAVYQ 145
Query: 157 GMIWIWPG--DEPPTATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 210
GM++++PG + +P + P P G+ I ++P + L++N+LD +H P+
Sbjct: 146 GMLFVYPGRAENAAKTKVPIVEPLEQDPDGW-ICLNTFRDVPYDALTLMENVLDTSHIPY 204
Query: 211 THTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
TH T +V P ++ + G +G W P R + PG +
Sbjct: 205 THHRTVGNRANVSPIDLEIIESGKWGFKGTWAEGP-----RKGTLGRQDTTFIAPGLMWH 259
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLN 325
T + + P + + RL R F+S L + F++ + H + +
Sbjct: 260 DLTSKQYGRTLTVVYATPIRKGECRLFARFPFKFSSNLPGL-FLKLTPRWYSHIGQNRVL 318
Query: 326 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
ED ++ L QER N + LP D + R W
Sbjct: 319 EDDQIFLHYQERYLEKLGGSANFTKAFYLPTKADLFVFQLRSW 361
>gi|339328975|ref|YP_004688667.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
gi|338171576|gb|AEI82629.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
Length = 351
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 43/323 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVN 115
L N W+ A ST++ + + + +I+R +D G P + + C HR PLHLG +
Sbjct: 8 LMNAWYVAALSTEVGPEELFHRKILDVSVMIYRKQDDGTPVAMHDRCPHRFAPLHLGKRH 67
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ CPYH + G C P + +K+ P E+ G +WIW GDE P
Sbjct: 68 GDEVSCPYHALRFDCLGTCTHNPHGTGHIPKAASVKTFPLAEKYGFVWIWMGDEAPDLK- 126
Query: 173 PCLLPP-SGFEI-HAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSL 225
LLP S +I HA V M +P+ + L++DN++DL+H H +G P +
Sbjct: 127 --LLPDYSELDIGHANAVGYTYMHMPVNYELIIDNVMDLSHIDHVHGEIITTRGKLSPVI 184
Query: 226 VKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPG 264
K + W+ P P D+ + PP + ++ G
Sbjct: 185 PKVADVQRTVNARWEWTQSPAMMIFANFLPQPEEEARHYFDITWAPPANIQLSV-----G 239
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
++G+ + + LH P ++ T + + M+ H A +
Sbjct: 240 AVQGEMSFDDYIGQYDLHTTTPETQGSTHYFFATRRNHIVEDGDYNKMKIQAMHGAFE-- 297
Query: 325 NEDLRLVLGQQERMNNGANVWNL 347
NED ++ Q M + AN ++L
Sbjct: 298 NEDGPIISAVQREMGD-ANFFDL 319
>gi|443474699|ref|ZP_21064670.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
gi|443020589|gb|ELS34534.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
Length = 480
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 134/319 (42%), Gaps = 43/319 (13%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 105
+G P + W+PV + DL F E VI+ + + C HR
Sbjct: 31 AGGRDPDRFDWQEVWYPVFYLEDLDKTKPAKFTLLERDLVIWWDRHSNAWQAFDDRCPHR 90
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 157
PL G + E G ++CPYHGW + DG C+++P + + + SLP E++G
Sbjct: 91 LVPLSEGRIAEDGLLECPYHGWAFKGDGSCDRIPQQPEGGTAHTSKRACVSSLPTAERQG 150
Query: 158 MIWIWPG--DEPPTATIPCLLPPSGFEIHAE------IVMELPIEHGLLLDNLLDLAHAP 209
+++I+ G + P IP + P E + +LP + LL+N+LD +H P
Sbjct: 151 LLFIYAGKPENAPQVKIPIIEP---LETETDKWTLFGTFRDLPYDAITLLENVLDASHLP 207
Query: 210 FT-HTSTFAKGWSVPSLVKFL-TPASGLQGYWDPYP-------IDMEFRPPCMVLSTIGI 260
FT H S + + P ++ L T G +G W+ P D F P ++ +
Sbjct: 208 FTHHKSVGNRANAAPMFLEVLETEKYGFKGTWEEGPRRGKLGRQDTTFIAPSLMWHDL-- 265
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRH 318
++Q + ++ P+ + + RL R F+S + + + H
Sbjct: 266 ---------TSKQFGRTITAVYAT-PTRKGECRLFARFPFQFSSAIPRFFIGITPRWYSH 315
Query: 319 FAEQVLNEDLRLVLGQQER 337
+ + ED ++ L QER
Sbjct: 316 IGQNGILEDDQIFLHYQER 334
>gi|347529646|ref|YP_004836394.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345138328|dbj|BAK67937.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 350
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T ++N W+ ++ DLK DT E VI+R G +++ C HR PL LG
Sbjct: 2 TYVRNAWYVAGWAQDLKADTPFAITILGERIVIWRTASGAIHALEDRCVHRLAPLSLGRC 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
R++C YHG + DG+ +MP Q R +++ P + +W+W GD P
Sbjct: 62 EGERLRCMYHGLLFDPDGRVVEMPG-QDRIPPQARVRHYPVVARHSWLWVWMGD--PARA 118
Query: 172 IPCLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
L+PP+ H + + ++ E L+ DNLLD +H F H ++F G
Sbjct: 119 DESLIPPAVGLDHPDYILGHGQLDYAAEARLINDNLLDFSHLTFVHANSFGSG 171
>gi|221210451|ref|ZP_03583431.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|421478825|ref|ZP_15926554.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|221169407|gb|EEE01874.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|400223985|gb|EJO54251.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 347
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ + + C E V FR +G +++ C HR PL LG+V +
Sbjct: 3 LKNAWYVACTPDEFASKPLGRQICGER-MVFFRDGEGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGKC MP ++ + I+ P E+ G +W+WPGD P P
Sbjct: 62 GHLVCGYHGLTMGADGKCTSMPCQRVGGIPAIRRYPAVERYGFVWVWPGD--PAQADPAT 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ P + + + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 IHPLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|384247255|gb|EIE20742.1| hypothetical protein COCSUDRAFT_67210 [Coccomyxa subellipsoidea
C-169]
Length = 555
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVA D+ +P + V+++G DG CV + CAHR PL G V +G IQ
Sbjct: 88 WYPVAILADVDGSKPIPVTLLGKKLVLWQGSDGEWNCVVDRCAHRYAPLSEGRVKDGDIQ 147
Query: 121 CPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
C YHGW+Y+ G+C ++P + + +++ P + G +W+WP P A
Sbjct: 148 CAYHGWQYNGQGQCTRIPQAEDASACCSSSACVEAFPVQLRAGAVWVWPDSSPSAARDSS 207
Query: 175 LLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFT 211
L+ PS + E + + + L++ LLD + FT
Sbjct: 208 LVLPSVDTVLEESLEYVDWYIRDFYYGYAGLMEMLLDPSACSFT 251
>gi|152995325|ref|YP_001340160.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150836249|gb|ABR70225.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 367
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 145/355 (40%), Gaps = 49/355 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S ++ + E +R D V + C HR L LG V +G
Sbjct: 8 KNMWYVAAMSEEVAGSKPLGRKICGESIAFYRSHDNEIAAVLDFCPHRGAALSLGYVEDG 67
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG + DGK ++MP +++ +KS E+ G IW+WPGD+ + L+
Sbjct: 68 LLVCGYHGLKMGADGKTKEMPLQRVKGFPCMKSYAVEERYGFIWVWPGDQ--SQADKDLI 125
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 227
P + ++ E + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 126 PHLEWAVNPEWAYGGGLYHINCDYRLMVDNLMDLTHETYVHASSIGQKEIDESPVSTKVE 185
Query: 228 -----------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK- 265
F A G D P+D F PP V+ +G++ G
Sbjct: 186 GDKVITSRFMENIMAPPFWRSALRGNGLADDVPVDRWQICRFSPPSHVMIDVGVAHAGHG 245
Query: 266 -LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE--- 321
E ++ ++ + + P + + M+ +F P Q L E
Sbjct: 246 GFEAPADKKASSTV--VDFITPETETSIWYFWGMARNFK------PEDQELTDTIREGQG 297
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQLP 373
++ EDL ++ QQE + + L + D GV+ R D A E+ AKQ P
Sbjct: 298 KIFAEDLEVLERQQENLLAFPDYDLLKLDIDAGGVQSRRVIDRIIAKEQAAKQQP 352
>gi|295689725|ref|YP_003593418.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter segnis ATCC
21756]
gi|295431628|gb|ADG10800.1| Rieske (2Fe-2S) iron-sulfur domain protein [Caulobacter segnis ATCC
21756]
Length = 357
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 126/316 (39%), Gaps = 37/316 (11%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 145
VI RG+DG +++ C HR PL LG V +G + C YHG DG+ MP ++
Sbjct: 42 VIHRGRDGQAVALEDFCPHRGAPLSLGFVRDGELVCGYHGLAMGCDGRAASMPGQRVIGF 101
Query: 146 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 201
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 102 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWAESPDWTYGGGLYHIACDYRLMVDN 161
Query: 202 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 235
L+DL H + H TS F +G P + +GL
Sbjct: 162 LMDLTHETYVHATSIGQKEIDEAPVTTKLEGDEVVTSRFMEGIHAPPFWRMALRGAGLPE 221
Query: 236 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 295
D + I F P V+ +G++ G Q + P +
Sbjct: 222 DALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYQAPADKKVSSVVVDFITPETETSHWYF 280
Query: 296 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 355
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 281 WGMARSFA--VSDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAWPDRKLLKLNIDAGG 337
Query: 356 VRYRLWRDALEKGAKQ 371
VR R+ A++K Q
Sbjct: 338 VRSRM---AIDKAIAQ 350
>gi|372270603|ref|ZP_09506651.1| Rieske (2Fe-2S) domain-containing protein [Marinobacterium stanieri
S30]
Length = 377
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+ VA S ++ D ++ + V+FR +DG P + N C HR+ PL ++
Sbjct: 25 IYNEWYVVALSREI-DRELMARTVLDRQLVLFRKEDGTPVALDNRCGHRSFPLSRSALEG 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 173
+ C YHG Y +G+C ++PS + I+S P +Q ++WIW G +E + IP
Sbjct: 84 DTVVCGYHGLRYDENGQCVEVPSQCSCAGISIRSYPLHQQGPVVWIWMGEPEEADISKIP 143
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
+ + +E M L + L +NLLDL H F H TF
Sbjct: 144 AMPMLEEGWVTSEDYMPLKASYVYLHENLLDLTHLSFLHAKTF 186
>gi|298489953|ref|YP_003720130.1| Rieske (2Fe-2S) domain-containing protein ['Nostoc azollae' 0708]
gi|298231871|gb|ADI63007.1| Rieske (2Fe-2S) iron-sulfur domain protein ['Nostoc azollae' 0708]
Length = 353
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N L+N W+ S LK MV EEP ++ R KDG V++ C HRA PL G
Sbjct: 5 NILLRNIWYYALPSYLLKPGKMVAKILLEEPILLIRNKDGQVSAVRDICPHRAVPLSCGR 64
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD-- 165
N ++C YHGW + G+C ++PS T L ++S P E +G IWI+ D
Sbjct: 65 FNGQEVECCYHGWRFDPKGRCVEIPSLLPEQNTDLSRFDVQSYPIQETQGNIWIYMSDGD 124
Query: 166 ----EPPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 219
P +P + + H V+ P I+H + L+D AH+P+ H + +
Sbjct: 125 KYKPSPVENEVPIVSGVIEQQPHLVEVIRFPCFIDHA--VTGLMDPAHSPYVHRVWWWRS 182
Query: 220 WSVPSLVKFLTPA 232
+ VK P+
Sbjct: 183 GELHEEVKEFDPS 195
>gi|229590745|ref|YP_002872864.1| oxidoreductase subunit alpha [Pseudomonas fluorescens SBW25]
gi|229362611|emb|CAY49519.1| oxidoreductase alpha subunit [Pseudomonas fluorescens SBW25]
Length = 353
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG++G V++ C HR PL LG V+ G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEK-MVFYRGQEGAVVAVEDFCPHRGAPLSLGYVDNG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ + P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--SQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ +QG +W D P+D F PP VL +G++
Sbjct: 176 VTTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGK 265
GK
Sbjct: 236 HAGK 239
>gi|42524666|ref|NP_970046.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
gi|39576876|emb|CAE78105.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 53 YNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
Y+ LKN W+ S +L + EP V +R G +++ C HR PL G
Sbjct: 2 YSGFLKNVWYVGIPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYG 61
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 166
V +I+CPYHGW++ G C ++PS +K++S P E +G+IW++ GD+
Sbjct: 62 RVVNDQIECPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDK 121
Query: 167 PPTATIPCLLP-----PSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTF 216
+ +P P+ + + V+ P ++H ++ L+D AH P+ H S F
Sbjct: 122 DYDVSKAPAIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWF 176
>gi|425457635|ref|ZP_18837336.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
gi|389800952|emb|CCI19818.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
Length = 460
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCL--LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + + G I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLMENIIDSSHIPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T + +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLTSEKFGRTLTV 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D L YR W
Sbjct: 316 QAQGGSQNFSQACYLPTKADLLVFEYRNW 344
>gi|170721226|ref|YP_001748914.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida W619]
gi|169759229|gb|ACA72545.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida W619]
Length = 355
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 131/333 (39%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + + C E+ V +RG + V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEK-IVFYRGNENRVAAVEDFCPHRGAPLSLGFVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKAFAVVERHGFIWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK-- 227
P + E + + ++ L++DNL+DL H + H S+ + P +
Sbjct: 121 PHLPWAARDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVS 180
Query: 228 -----------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
F A G D P+D F PP VL +G++ G
Sbjct: 181 GDEVVTARHMENIMPPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGHG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
+ + P S + M+ +FA+ H + R ++ +E
Sbjct: 241 GYHAPAEHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQALTASIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAYPERNLLKLNIDAGGVQAR 330
>gi|427729894|ref|YP_007076131.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365813|gb|AFY48534.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 469
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 38/345 (11%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 105
+G + P + W+PV + DL F E V++ K+ + C HR
Sbjct: 19 AGGLDPERFDWQEVWYPVHYVEDLDKSQPTRFTLLERDIVLWWDKNEQTWRAFADQCPHR 78
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQE 156
PL G +NE G ++CPYHGW +S GKCE++P T LR + SLP ++
Sbjct: 79 LAPLSEGRINEDGWLECPYHGWAFSGTGKCERIPQQAAGDKAETSLRAC-VNSLPTTVRQ 137
Query: 157 GMIWIWPG--DEPPTATIPCLLPPSGFEIHAE------IVMELPIEHGLLLDNLLDLAHA 208
G+++++PG + T+P + E A+ ++P + L++N+LD +H
Sbjct: 138 GLLFVYPGRAENAAQTTVPIV---DALEEDADGWVCLNTFRDIPYDALTLMENVLDSSHI 194
Query: 209 PFTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
P+TH T +V +L + G +G W+ P R + PG +
Sbjct: 195 PYTHHRTVGNRANVSPVNLEVVESGKWGFKGIWEEGP-----RKGTLGKQDTTFIAPGLM 249
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVL 324
T + + P + + RL R F+S + + + H + +
Sbjct: 250 WHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSKIPGLFIKLTPRWYSHIGQNGV 309
Query: 325 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWR 362
ED ++ L QER N + LP D + WR
Sbjct: 310 LEDDQIFLHYQERYLEQRGGSANLNKAFYLPTKADAFVAQLHSWR 354
>gi|238023772|ref|YP_002908004.1| phenylpropionate dioxygenase [Burkholderia glumae BGR1]
gi|237878437|gb|ACR30769.1| Phenylpropionate dioxygenase [Burkholderia glumae BGR1]
Length = 374
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+P+A+S +LK + +P V+FRG G +++ CAHR PLH G V+
Sbjct: 32 DFWYPLAWSRELKRGKTLGVHFAGDPIVLFRGDSGTVFALEDRCAHRQVPLHAGVVDGDA 91
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 170
++C YHGW Y GKC +P +L N ++S PC E +G+I+++ G DE P
Sbjct: 92 LRCGYHGWTYDCSGKCVDVPYLGKERLPN-GVRSYPCREVQGLIFVFTGDLALADEKPVP 150
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+P + P E+ + + +NL+D+ H F H +
Sbjct: 151 ALPTVSDPK--YKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRREMGQ 195
>gi|426405189|ref|YP_007024160.1| oxidase-like protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861857|gb|AFY02893.1| oxidase-related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 346
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 53 YNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
Y+ LKN W+ S +L + EP V +R G +++ C HR PL G
Sbjct: 2 YSGFLKNVWYVGLPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYG 61
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 166
V +I+CPYHGW++ G C ++PS +K++S P E +G+IW++ GD+
Sbjct: 62 RVVNDQIECPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDK 121
Query: 167 PPTATIPCLLP-----PSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTF 216
+ +P P+ + + V+ P ++H ++ L+D AH P+ H S F
Sbjct: 122 DYDVSKAPAIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWF 176
>gi|393770172|ref|ZP_10358677.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
GXF4]
gi|392724326|gb|EIZ81686.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
GXF4]
Length = 362
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 144/364 (39%), Gaps = 42/364 (11%)
Query: 39 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 98
LPR + + + + L N W+ V S L + + E V+ R DG P +
Sbjct: 8 LPRPAEDAALDPEAMRQPLGNAWYCVGQSRSLGRTGLRAVELNGEQIVLGRAPDGTPFAL 67
Query: 99 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPC 152
++ C HR L G + + CP+HGW + TDG+C +P + ++++ P
Sbjct: 68 RDRCPHRGMALSKGRFDGDTLMCPFHGWRFGTDGRCRDVPTLSEHDAADFSRIQVQRFPV 127
Query: 153 FEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPF 210
E G +W+ P P + +P +P FE +V+EL +E + L +L+D H F
Sbjct: 128 RESAGFLWVNPHLGPASGAVPA-VPELDFEPAGSLVVELVVEASYDLTTLSLVDPGHVAF 186
Query: 211 THTS-TFAKGWSVPSLVKFLTP--------------ASGLQGYWDPYP-IDMEFRPPCMV 254
H S F + VK P +S + P +++EFR P M
Sbjct: 187 VHDSWWFRPSKQLREKVKTFQPVPHGFVMTSHATTTSSPVYRLLGGVPEVEIEFRLPGMR 246
Query: 255 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 314
L I R A + P + +T L + ++ P +
Sbjct: 247 LERI-------------RAGAKRVANYTFATPLTPDRTLLTNALYWSMPALNLLKPVARP 293
Query: 315 LWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
L R F L +D +++ Q+ ++ + G +RL R+ALE PF
Sbjct: 294 LMRQF----LTQDQQVLQHAQDGLDRKPTMVLFGQGDLPSQWYFRLKREALESARAGRPF 349
Query: 375 MKPM 378
+ P+
Sbjct: 350 VNPL 353
>gi|332531588|ref|ZP_08407485.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
gi|332038951|gb|EGI75380.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
Length = 362
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 132/338 (39%), Gaps = 46/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S ++ D + E +R G VQ+ C HR PL LG V +G
Sbjct: 9 KNTWYVAASSQEIGADKPLGRMVCGERIAFYRDAAGKMVAVQDFCPHRGAPLSLGHVCDG 68
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R IKS P E+ G +W+W G+ L
Sbjct: 69 QLTCGYHGLVMGCDGKTVSMPGQRVRGFPAIKSFPVAERYGFVWVWTGE--AALADEAKL 126
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 212
P F H E + + ++ L++DNL+DL H + H
Sbjct: 127 PVLEFFDHPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPCKTTVE 186
Query: 213 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGIS-- 261
TS F G P K A+GL D P+D F PP V+ +G++
Sbjct: 187 DDTVVTSRFMSGIEAPPFWKMALRANGLP---DDQPVDRWQICRFSPPSHVMIEVGVALQ 243
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G + N ++ + + + P + + M+ F + R
Sbjct: 244 GHGGYDAPNDKKAYSVV--VDFITPETETSIHYFWGMARKFKPQDAE---LTNTIRQGQG 298
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + L + D GV+ R
Sbjct: 299 KIFAEDLEMLERQQKNLLAWPERQLLMLNIDAGGVQSR 336
>gi|399071851|ref|ZP_10750106.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398043032|gb|EJL35974.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 352
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ +A+S +++ ++ +P V +R + G + + C+HR PL LG
Sbjct: 3 LKNCWYALAWSHEVQGAGLLARKVIGQPLVAYRTEGGEAAVLIDRCSHRFAPLSLGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG + T G C P + N+ I+S P E+ +IW+W G+ P+ P
Sbjct: 63 DTLRCMYHGLVFDTQGACVLEPGRKRPSPNMAIRSYPVVERYKLIWVWMGE--PSLADPD 120
Query: 175 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV----- 222
L+P P+ I A I ++ L++DNLLD +H F H +T ++
Sbjct: 121 LVPDCHWQDDPAWRSIPAYI--HYKADYRLIMDNLLDFSHLSFVHENTLGGSLAIAETAP 178
Query: 223 ------------------PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP- 263
P L +L + +QG D + I E+ P VL+ S P
Sbjct: 179 LIEQIDKTVRITRWYRNEPDLAPYLKGVAEIQGPIDRWNI-YEWHMPGNVLNMDSGSAPA 237
Query: 264 --GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
G EG + A H + P K + + +F
Sbjct: 238 GTGAPEGHRVPE-ALQFHATQIVTPEDGKNSHFFWSYGHNF 277
>gi|398385455|ref|ZP_10543476.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
gi|397720406|gb|EJK80963.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
Length = 355
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 38/278 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L + W+ + +L+ + +P V+FR + G +++ C HRA PL G V
Sbjct: 14 LHDIWYVAGWGHELQPGSRTSRTILGQPLVLFRTEGGEVSALEDRCCHRAMPLSEGVVIG 73
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+CPYHG E+ TDG C +P+ R +++ P E++ ++WIW GD
Sbjct: 74 ESIRCPYHGLEFGTDGACVHIPAQDKIPRTARVRHFPLVEKDALLWIWMGDADKADI--A 131
Query: 175 LLPPSGFEIHAEIVMELPIEH-------GLLLDNLLDLAHAPFTHTSTFAKG----WSVP 223
++P + H + H LL+DNL+DL+H P+ H ST + P
Sbjct: 132 IIPDHPY--HQDPAWAWRSAHYDVQGNWQLLVDNLMDLSHLPYIHPSTIGGDPELHFKTP 189
Query: 224 SLVKFL-------------------TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
++ L A+G +G D + ++EF+P + + T G G
Sbjct: 190 TISTRLPNGVRVERKMPSSVPPPTYVAAAGFKGLVDRWQ-EIEFQPVFIRIHT-GACDEG 247
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
R + H P + T + M+ +
Sbjct: 248 TGAYDGDRSHGLSMLGFHGITPETETTTHYFWSMATNI 285
>gi|229086002|ref|ZP_04218224.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
gi|228697313|gb|EEL50076.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
Length = 324
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 25/307 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ V FS D+ D + + V+FR ++ V C HR L LGS+ +GR+
Sbjct: 18 WYAVCFSKDVIDKP-IKRKIVGKDLVLFRNENHNIQAVHAYCPHRGADLSLGSIRKGRVT 76
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
C YHGWE+ G C +PS + + KS P E+ G+IW++P E +P L
Sbjct: 77 CAYHGWEFDGGGTCVCIPSQPSKQIPKFAHTKSYPVMEKAGLIWVYPECEISKEELPILE 136
Query: 177 PPSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 232
E + + + +++++LD+ H F H +T KG S P L +
Sbjct: 137 IFEEVEDINFVFSPYQAKWNAHFTRVVESVLDVVHLSFVHKNTIGKG-SNPELEEL---- 191
Query: 233 SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 292
++G D + + C + KP LEG+N + P ++T
Sbjct: 192 -QIEGDLDSFSLKNGEAYLCYKFPQQWLLKP--LEGKNKK-----FINFVTFTPVDEEET 243
Query: 293 RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYD 352
+ +FA K +P + ++ ++ +VL ED +V Q R A V D
Sbjct: 244 LIFGLAGRNFA---KKMPLLHTIFSRYSLKVLKEDQLVVESQHPRPIPEALKMEAHVYAD 300
Query: 353 KLGVRYR 359
+++R
Sbjct: 301 AAQIKFR 307
>gi|307153793|ref|YP_003889177.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984021|gb|ADN15902.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 355
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 47 SGPVQPYNTRLK------NFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCV 98
S P+ P NT ++ N W+ VA S ++K +P+ + + V++R + GI +
Sbjct: 5 SSPIIPENTDVRTCPINPNHWYAVARSCEVKR---LPYSIILWHQAIVLYRDQKGIIHAL 61
Query: 99 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFE 154
++ C HR L GSV+ ++C YHGW ++ +GKC +P +L + +I+S P E
Sbjct: 62 EDRCPHRQVKLSHGSVSGNDLECAYHGWRFNREGKCTFVPYLAEHQKLPSCQIRSYPVLE 121
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAH 207
+G IW++PGDE A L P G I V+ P + L++NL+D+ H
Sbjct: 122 LDGFIWLFPGDE--QALKQKSLQPMGVPEWDHLNYIATVSVINCPGHYSFLIENLMDMYH 179
Query: 208 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDP---YPID 245
H + W+ L + + Y++ Y ID
Sbjct: 180 G---HLHNNYQAWAAAKLQNLSVEQNRIDAYYEAQSYYRID 217
>gi|239813648|ref|YP_002942558.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239800225|gb|ACS17292.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 353
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 40/345 (11%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 103
+N PY + N W+ A++ DL M + P +++R +DG P +++ C
Sbjct: 1 MNTDASPSPY---VHNAWYVAAWAKDLVH-AMRAITIMDRPVLLYRTEDGRPIALEDRCC 56
Query: 104 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWI 161
HR PL G++ +QC YHG+ + G+C +P+ + ++K P E ++WI
Sbjct: 57 HRRVPLSRGTLIGDTVQCGYHGFTFDCSGQCIAIPNQEQIPPRARVKGYPVCEMHHLVWI 116
Query: 162 WPGDEPPTATIPCLLPPSGFEI-----HA--EIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
W GD P L+P F + HA M + L++DNL DL+H F H+S
Sbjct: 117 WMGD--PARADEALVP--DFSVLSDPRHAWERDYMHAKGNYRLIVDNLNDLSHLSFVHSS 172
Query: 215 TFAKGWSVPSLVKFLTPASGL-QGYWD---------------PYPID----MEFRPPCMV 254
T + + ++ G+ Q W PID + F PP V
Sbjct: 173 TIGNAATALAELEVSDGEQGVTQTRWMINTPPPPTYQRLAGFEGPIDRWQVIAFLPPTTV 232
Query: 255 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 314
G E + LH P + + + + DF + V Q
Sbjct: 233 RIRTGGRARSNGERNFDGDDTIGMVALHAITPETATTSHYFWAQTHDFRTDEPAV--TQS 290
Query: 315 LWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
L++ ++ +EDL + QQ + N N + D+ + R
Sbjct: 291 LFQEI-KKAFHEDLEIFALQQAAIQNDPNGEEISCRADRAQIAVR 334
>gi|119510320|ref|ZP_01629456.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
gi|119465064|gb|EAW45965.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
Length = 445
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 147/344 (42%), Gaps = 46/344 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+P++ D+ P VI++ K V + C HR PL G V+E G
Sbjct: 11 WYPLSPVEDIDPTRPTPVTLLGIRLVIWKPKSSETYQVFLDQCPHRLAPLSEGRVDEKSG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKI---KSLPCFEQEGMIWIWPGDEPPT 169
+ C YHGW++ + G C +P + +N KI SLP + ++W+WP
Sbjct: 71 NLMCSYHGWQFDSQGICTHIPQAEKPEIVTKNEKIFCVISLPVRQANDLLWVWPDANSAE 130
Query: 170 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-GWS 221
A LP S G+ + + V +L + L++N+ D +H PFTH K ++
Sbjct: 131 AAANTPLPLSPQVDADKGY-VWSSYVRDLEYDWETLVENVADPSHVPFTHHGVQGKREYA 189
Query: 222 VPSLVKFLTPASGLQGYWDP--YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
P ++ + S L + + F PPC + I + G+ +
Sbjct: 190 TPIPMEVVQSTSKLIEAMTSGRFKTTITFEPPCRLEYAINLGDSGE----------KKVG 239
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 337
+ C+P S K+R++ + +FA L + W H + VL+ D+ +VL QQE
Sbjct: 240 LVTYCIPVSPGKSRIVAQFPRNFAKTLHRL--TPRWWSHINTRNLVLDGDM-IVLHQQEN 296
Query: 338 -------MNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
+ + ++ LP D+L + +R W D G QLP+
Sbjct: 297 FLQQRQAVESWKTIYKLPTSADRLVIEFRNWFDKYCFG--QLPW 338
>gi|221200592|ref|ZP_03573633.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|221208419|ref|ZP_03581421.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|421472997|ref|ZP_15921148.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|221171607|gb|EEE04052.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|221179164|gb|EEE11570.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|400221927|gb|EJO52348.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 347
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 139/340 (40%), Gaps = 37/340 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ + + C E V FR G +++ C HR PL LG+V +
Sbjct: 3 LKNAWYVACTPDEFASKPLGRQICGER-MVFFRDGQGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGKC MP ++ + I+ P E+ G +W+WPGD P P
Sbjct: 62 GHLVCGYHGLTMGADGKCTSMPCQRVGGIPAIRRYPAVERYGFVWVWPGD--PAQADPAT 119
Query: 176 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 218
+ P + + + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 IHPLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAPPTTKV 179
Query: 219 -GWSVPS--LVKFLTP----ASGLQ--GYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
G +V + ++ + P A+ L+ G D D F PP V+ +G++ GK
Sbjct: 180 DGDTVTTSRFMEGIVPPPFWAAALRGNGLADDVRCDRWQICHFTPPSHVMIEVGVAHAGK 239
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
G + + V + +T + Y + + + + + R +
Sbjct: 240 --GGYHADPRDKVSSIVVDFITPETETSIWYFWGMARSFAVDDRALTETI-RKGQGAIFA 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
EDL ++ QQ + + L + D GV+ R D L
Sbjct: 297 EDLDMLEAQQRNLLRWPDRPLLKLNIDAGGVQSRRVLDRL 336
>gi|308811733|ref|XP_003083174.1| slr1747 (ISS) [Ostreococcus tauri]
gi|116055053|emb|CAL57449.1| slr1747 (ISS), partial [Ostreococcus tauri]
Length = 405
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVK--IKSLPCFEQEGMIWIWPG-- 164
G ++C YHGW ++ +GKC +P T L++ + + + PC E++GM+W++P
Sbjct: 5 GELECGYHGWTFTGEGKCTSIPQIEPGAGLETALKSPRACVAAYPCVEKQGMLWVYPTAK 64
Query: 165 DEPPTATIPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
D+ P AT+P L L P + ++ ++ +LP++ LL+N++D++H PFTH ++ K
Sbjct: 65 DKAP-ATLPELPLIPEIDDPDCVYQDVFRDLPMDWATLLENVMDVSHVPFTHHNSVGKRE 123
Query: 221 SVPSLVKFLT-----PASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEG 268
+ + LT ASG QG W P EF+ P ++ T+
Sbjct: 124 NATPVNLELTSADGVSASGFQGMWQEGPRKGKYGSQYTEFKAPTLMRHTL---------- 173
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRHFAEQVLNE 326
R A + +P++ + RLL R F S L F Y + H + + E
Sbjct: 174 ---RTEAFTTLTVVYAVPTTPGRCRLLARFPFIFKSALPRFFFGLYPQWFSHTNQNSILE 230
Query: 327 DLRLVLGQQERM---------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 377
D ++ L +QER+ + A +P D +R W + G P P
Sbjct: 231 DDQIFLHKQERLIEVDQKIKGKSYAQSCYMPTKADVYVSAFRKWITEIAGGGPAWPLGMP 290
>gi|124266197|ref|YP_001020201.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258972|gb|ABM93966.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 353
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 39/272 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A ST++ + + +I+R +DG + + C HR PLHLG
Sbjct: 12 LTNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIG 71
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 172
+ C YH ++ G+C K P + Q+ + K++S P E+ G +WIW G D P A +
Sbjct: 72 DEVACLYHALQFDCTGQCTKNPHGNGQIPKAAKVRSFPLEERYGFLWIWMGEDAPDLARL 131
Query: 173 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 226
P P +G A M + + L++DN++DL+H H +G P +
Sbjct: 132 PDFGELDKGPDTGV---AFTYMHMKANYELIIDNVMDLSHVDHVHGEIITTRGQLSPQIP 188
Query: 227 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISK-PG 264
K + W+ P P I++ + PP + ++G ++ G
Sbjct: 189 KLREGTESVAARWEWQQTPPLLILADFLPEPKTQARHFIEVSWSPPANIQLSVGATQNDG 248
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
L+ N C + LH C P + T +
Sbjct: 249 ALDLVN---CIGQ-YDLHTCTPETANTTHYFF 276
>gi|398994825|ref|ZP_10697720.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398131654|gb|EJM20968.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 352
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V+N C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIASKPLGRQICGEKI-VFYRGHEGRVAAVENFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQGKAD--PDLI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ +QG +W D P+D F PP VL +G++
Sbjct: 176 VTTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTDTIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQE + L + D GV+ R
Sbjct: 293 KIFSEDLDMLEQQQENLLANPERNLLKLNIDAGGVQSR 330
>gi|297170934|gb|ADI21951.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [uncultured nuHF2
cluster bacterium HF0130_29D04]
Length = 329
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A S ++ + E V FR G +++ CAHR PL LG V
Sbjct: 6 LQNQWYAAALSKEVPEKEPFARKICGEDIVFFRKPKGEVSALEDRCAHRHAPLSLGLVEN 65
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD--EPPTATI 172
G I+C YHG + +G+C ++P + +IKS P EQ+G +WIW G +TI
Sbjct: 66 GSIRCQYHGMLFDGNGQCVEVPGQEKIPSGARIKSYPVAEQDGWVWIWIGKNGSQSVSTI 125
Query: 173 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P +GF+ + + L +DNLLDL+H FTH S+
Sbjct: 126 PSFPYFDTAKWAGFQKY----FHVQGAAQLFVDNLLDLSHLAFTHKSSIG 171
>gi|399002921|ref|ZP_10705597.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
gi|398123837|gb|EJM13371.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
Length = 348
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G +Q + P + + M+ +F + R
Sbjct: 236 HAGHGGYHAPQQLKASSIVVDFITPETETSIWYFWGMARNFNP---QDEALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLSHPARNLLKLNIDAGGVQSR 330
>gi|8346964|emb|CAB93956.1| a-subunit oxygenase [Pseudomonas fluorescens]
Length = 353
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 132/341 (38%), Gaps = 52/341 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L+ + P + V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGQALGPARSAAKRMVFYRAHEGRVAAVEDFCPHRGAPLSLGYVENG 63
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 121
Query: 177 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HHLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 176
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ + G +W D P+D F PP VL +G++
Sbjct: 177 QTTVDGDQVVTARHMHNVMPPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVLIEVGVA 236
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G + Q + P S + M+ +F P Q L E
Sbjct: 237 HAGHGGYDASAQYKASSIVVDFITPESDTSIWYFWGMARNFN------PQDQALTESIRE 290
Query: 322 ---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 291 GQGKIFSEDLEMLERQQQNLLAQPQRSLLKLNIDAGGVQSR 331
>gi|425444769|ref|ZP_18824812.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
gi|389735432|emb|CCI01073.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
Length = 460
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 30/329 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G +
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 167 PPTATIPCL--LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P IP + + G I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLIENIIDSSHIPYTHHLTIGNRANAA 200
Query: 223 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + + G +G W P R + PG + T + +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIVPGLIYHDLTSEKFGRTLTV 255
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 338
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 339 ------NNGANVWNLPVGYDKLGVRYRLW 361
N + LP D L YR W
Sbjct: 316 QAQGGSQNFSQACYLPTKADLLVFEYRNW 344
>gi|329851632|ref|ZP_08266389.1| vanillate O-demethylase oxygenase subunit [Asticcacaulis
biprosthecum C19]
gi|328840478|gb|EGF90050.1| vanillate O-demethylase oxygenase subunit [Asticcacaulis
biprosthecum C19]
Length = 349
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 138/351 (39%), Gaps = 53/351 (15%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
NT N W+ A S ++ + C E V +R +D +++ C HR PL LG
Sbjct: 2 NTWPMNTWYVAARSDEVAAAPLGRTICGER-MVFYRDQDHRAVALEDFCPHRGAPLSLGK 60
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 172
V++G++ C YHG DG+ MP ++R +K+ P E+ G IW+WPGD P
Sbjct: 61 VSDGKLVCGYHGLTMGCDGRAASMPGQRVRGFPPVKAYPAVERYGFIWVWPGD--PAQAD 118
Query: 173 PCLLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P LP + H + + H L++DNL+DL H + H + + + V
Sbjct: 119 PATLPNLIWGDHPDWAYGGGLYHIKCNFRLMIDNLMDLTHETYIHADSIGQKEIDEAPVA 178
Query: 228 ---------------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 262
F A G D P+D F PP V+ +G++
Sbjct: 179 TRLEDDEAITERYMSDIQAPPFWQMALRENGLADDVPVDRWQICRFSPPSHVMIEVGVAH 238
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY------RMSLDFASVLKHVPFMQYLW 316
G G + V + +T Y R D A + +
Sbjct: 239 AG--HGGYNAPDGVKAASIVVDFITPESETSHWYFWGMARRFKPDDAGLTDRI------- 289
Query: 317 RHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDAL 365
R ++ +ED+ ++ QQ+ + N G N+ L + D GV R D L
Sbjct: 290 REGQGKIFSEDMEMLERQQDNLTANPGRNLLKLNI--DAGGVHARRIIDRL 338
>gi|115391876|dbj|BAF33363.1| alpha-subunit oxygenase [Streptomyces sp. NL15-2K]
Length = 356
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 47/353 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + ++ EP V +R + DG P + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LLGRTILGEPLVFYRTEEDGTPVVLHDRCVHRRFPLSEAPTRL 67
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P
Sbjct: 68 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD--PALAD 125
Query: 173 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 212
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 PQTIPRAKHLDSPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET 182
Query: 213 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
T+ +G + + + F ++G+QG + D+E+ PC+ L I+
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAACPPFYAKSTGIQGRITRWQ-DIEYHAPCLYLLHSRIA 241
Query: 262 KPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
G + E + H + PS+ K + +S D+A+ ++L +
Sbjct: 242 PVGVVPEPDGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWAT--DDAEVTEFLRGNNH 299
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAKQL 372
V+ + L L Q+ L + D G+ R+ +E+GAK +
Sbjct: 300 TVVMQDVDALNLLQKTLGTERTGYQELSINIDTGGLAARRILARLVEEGAKPM 352
>gi|377811423|ref|YP_005043863.1| Rieske (2Fe-2S) protein [Burkholderia sp. YI23]
gi|357940784|gb|AET94340.1| Rieske (2Fe-2S) region [Burkholderia sp. YI23]
Length = 428
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQNTCAH 104
+GP P + FW P S +L + P E + FR +G G + CAH
Sbjct: 13 TGPGAPMGELFRRFWLPALLSEELAEPGGEPVRLQLLSERMLAFRDSEGKLGLIDEFCAH 72
Query: 105 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMI 159
R L G EG I+CPYHGW+Y +G+C +PS +K+KS P EQ G+I
Sbjct: 73 RGVSLWFGRNEEGGIRCPYHGWKYDVNGQCVDVPSEPAASGYCNKIKLKSYPLVEQGGVI 132
Query: 160 WIWPG---DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
W++ G ++PP P+G + + E L+ +D +H F H+ +
Sbjct: 133 WVYMGPKDEQPPLPAFEFSTVPAGQSFMTKRLQECNWLQA--LEGGVDSSHVSFLHSGSL 190
>gi|383452944|ref|YP_005366933.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380734627|gb|AFE10629.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 363
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
RL + WF + S +L D + P V+FRG+ G PG + + C HR PL LG V
Sbjct: 20 VRLPHSWFILCTSRELGDRPLA-RTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRV 78
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPST----QLRNVKIKSLPCFEQEGMIWIW--PGDEPP 168
G+++C YHGW + T G+C +P + R+ S EQ+G +W++ PG EP
Sbjct: 79 TNGQLECGYHGWRFDTGGQCRLIPGLVGEPEARSRCAASYATREQDGFVWVYSTPGVEPT 138
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
+ L + V+ P +L+N LD+ H F H F
Sbjct: 139 SEPFRFPLLDAADYTTVRRVLRAPGSLHAVLENTLDVPHTAFLHGGLF 186
>gi|397588210|gb|EJK54188.1| hypothetical protein THAOC_26247 [Thalassiosira oceanica]
Length = 855
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 40/349 (11%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
+ + W+ VA+ +K+ + + EP V++R DG C ++ C HR+ PL +G
Sbjct: 389 SASFNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDVCPHRSAPLSMGK 448
Query: 114 VN-EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----------IKSLPCFEQEGMIWI 161
+N EG+++C YHGW + DG E +P TQ+R+ +K+ E EG+IWI
Sbjct: 449 INDEGQLECMYHGWGFGKDGNIESIP-TQIRDGGSSKRSPPKRSCLKTYCVEEHEGLIWI 507
Query: 162 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
W G+ E + +P S + I + V++ ++ +++N LD H + H +
Sbjct: 508 WRGELLEADASKLPKTRDVSTYPI--DTVLDYNVDWQYIVENNLDSPHLFWLHNGSVPPV 565
Query: 220 WSVPSLVKFLTPASGLQGYWDP-----YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
S+ + V+ LQ + D Y +P + + I + G
Sbjct: 566 RSL-NFVREKVNQVKLQYFRDDSGHGHYGQTAGGKPKIVRFDSPNIVRHGG--------T 616
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK---HVPFMQYLWRHFAE----QVLNED 327
++ + H+ +P + +TR+L R +L +L +P ++ + ED
Sbjct: 617 SSFSEEFHI-VPIAPGRTRVLLRQNLPKGPILTTALSIPGADFVLEKLVNLWNYHIALED 675
Query: 328 LRLVLGQQERMNN-GANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFM 375
++ GQ +++ GAN ++ D L + W++ LPF
Sbjct: 676 YSVMQGQAHNVDDLGANHLSVGDLGDDLIKHFYKWKEHAVANDGALPFF 724
>gi|86747254|ref|YP_483750.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86570282|gb|ABD04839.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 355
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 33/258 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+P+ +S D+ + V++R + G P + + C HR PL +G +
Sbjct: 12 RNNWYPLTWSRDVTR-ALGCHRILGIDLVVYRSEAGEPIALDDVCPHRLAPLSIGKLKGD 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
I+C YHG ++ DG+C ++P + N ++ S P E+ G++WIWPGD P P L
Sbjct: 71 AIECGYHGMTFARDGRCIRIPGQPIIPPNARVPSYPLHEKMGLVWIWPGD--PALADPAL 128
Query: 176 L-------PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
+ P H + + + + L DNL D AH F H ST S V+
Sbjct: 129 IYDLPQYGQPDWHAAHGD-ALRIGTNYLNLADNLCDPAHVSFVHLSTLGNAASEEIPVEH 187
Query: 229 LTPASGLQGY-W--DPYPIDM-----------------EFRPPCMVLSTIGISKPGKLEG 268
A G+ + W D PI + ++R P + + G ++ G +
Sbjct: 188 TVNARGVLVWRWINDAPPIPLFAKYGSFTGHVDRWHYYDYRAPSIAVIDFGSAEAGAIAD 247
Query: 269 QNTRQCATHLHQLHVCLP 286
R + H P
Sbjct: 248 PEQRDAGLRIFACHFITP 265
>gi|87124080|ref|ZP_01079930.1| cell death suppressor protein [Synechococcus sp. RS9917]
gi|86168649|gb|EAQ69906.1| cell death suppressor protein [Synechococcus sp. RS9917]
Length = 439
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVN-EGR 118
W+PVA+ DL F E V++ ++ G + C HR PL G +N EG+
Sbjct: 9 WWPVAYLCDLDRGRPSRFTLLERDLVLWWDREAGQWRAFDDVCPHRLVPLSEGRINAEGQ 68
Query: 119 IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
++CPYHGW + G C ++P + R +SLP +G++++W GD P +
Sbjct: 69 LECPYHGWSFDGSGHCRRIPQMTEEARPEGRRSSCRSLPTASAQGLLFVWSGD--PASAD 126
Query: 173 PCLLP------------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
P LP G+ + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 PAALPLVPVLQEQGEGWADGWVVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGRRD 185
Query: 221 SVPSLVKFLT--PASGLQGYWDPYP 243
+ + +T +G + +W P
Sbjct: 186 NAAPVQAEITREDGTGFEAFWQEGP 210
>gi|209965428|ref|YP_002298343.1| Rieske [2Fe-2S] domain-containing protein [Rhodospirillum centenum
SW]
gi|209958894|gb|ACI99530.1| Rieske [2Fe-2S] domain protein [Rhodospirillum centenum SW]
Length = 344
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++ W+ LK M+ EP + RG DG +++ C HR PL G +
Sbjct: 8 LQDLWYFALPGRALKRGRMLAKTLLGEPVLFGRGADGAAFALRDICPHRGIPLSCGRFDG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIW-----PGD 165
++C YHGW + DG C +PS L ++++S P E G +WIW P
Sbjct: 68 REVECCYHGWRFGADGGCTAIPSLVEGQAFDLSRIRVRSYPVRELNGNVWIWMGSGEPDG 127
Query: 166 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
EPP +P P ++ + ++H ++ L+D AH PF H S F
Sbjct: 128 EPP--AMPGFAPDRAADMVEVMAFPCFVDHAVI--GLMDPAHGPFVHRSWF 174
>gi|428777418|ref|YP_007169205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691697|gb|AFZ44991.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 354
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+PVA++ DLK +T+ + + IFR + G + + C H+ H G+VN
Sbjct: 24 NHWYPVAWAHDLKRETVQQVTVWYQNIAIFRDEAGDVHALADACPHKGVAFHKGTVNGNH 83
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPT 169
+ CPYHGWE++++GKC +P +L +S P E+ G+IW++PG +E P
Sbjct: 84 LVCPYHGWEFNSEGKCVHIPYFSEEQKLPRACARSYPTQEKYGLIWVFPGEAELAEEKPI 143
Query: 170 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF- 228
+P P + + + +N +D+ H + H +GW P L+
Sbjct: 144 LNLPEFENPKWLRV--PVTARFNAHFSMCNENTMDVFHG-YLHQDL--QGWFNPELITLK 198
Query: 229 -----------------LTPASGLQGYWDPY---PIDMEFRPPCMVLSTIGIS 261
L GL D PI +E+R P + GIS
Sbjct: 199 ETEDKVCAQYNVSYKGILAKFLGLTDRADEVTTLPITIEYRYPHYATTLEGIS 251
>gi|256394032|ref|YP_003115596.1| Vanillate monooxygenase [Catenulispora acidiphila DSM 44928]
gi|256360258|gb|ACU73755.1| Vanillate monooxygenase [Catenulispora acidiphila DSM 44928]
Length = 336
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 45/334 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A+++++ T + EP V +R G+DG + + C HR PL ++
Sbjct: 7 RNQWYVAAYASEVGR-TFLARTILGEPIVFYRTGQDGRAVALADRCVHRRYPLSESRLDG 65
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I C YHG+ Y T G C +P Q R ++ S P E + +W+W GD P
Sbjct: 66 DTIVCGYHGFTYDTSGTCVFVPGQQRIPRTARVASYPVAELDSFVWVWIGD--PELADDK 123
Query: 175 LLPPSGFEIHAEIV----ME-LPIEHGLLLDNLLDLAHAPFTH--------------TST 215
L+P + E V ME + ++GLL+DNLLDL+H + H T+
Sbjct: 124 LIPRAPHMADPEFVTVSGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVADTPITTD 183
Query: 216 FAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
+ + + + F ++G+QG D+E+ PC+ L I+ G+
Sbjct: 184 ADEQAGIVRVARHMVDAACPPFYAKSTGIQGRITRLQ-DIEYFAPCLYLLHSRITPAGE- 241
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
QN + PS+ + + +S +FA+ P + R F QV+ +
Sbjct: 242 --QNP---LFRTEITYAITPSAPGQVYDFWAVSRNFAT---DDPAVTEFLRDFNHQVVMQ 293
Query: 327 D-LRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
D + L + Q+ + A L +G D G+ R
Sbjct: 294 DVVALNILQKALDSESAGYQELSIGIDAGGLAAR 327
>gi|433455970|ref|ZP_20414034.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
gi|432196878|gb|ELK53298.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
Length = 364
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 146/351 (41%), Gaps = 53/351 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEG 117
N W+ A+ ++ M P ++R +DG + + C HR PL +G ++ +
Sbjct: 20 NAWYVAAWDHEVTRKPM-SRRIANRPVALYRTEDGKAVALADACWHRLAPLSMGKTIGKD 78
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
IQCPYHG Y++ G+C MP+ + N + S P E+ +W+W GD PT P L
Sbjct: 79 GIQCPYHGIVYNSAGRCVSMPAQETINPSATVPSFPVVERYRYVWVWLGD--PTMADPDL 136
Query: 176 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 218
+P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 137 VPDMHQMTSPEWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHSSSIGQEELSES 190
Query: 219 -------GWSVPS---LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 259
G +V ++ P L+ D +P +D + F P + +G
Sbjct: 191 DFVVSHDGNTVTVTRWMLNIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTIRIDVG 250
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 319
++K G + R + + ++ P + + + ++ L+ L R+
Sbjct: 251 VAKAGTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYR--LESQLITTQL-RNG 307
Query: 320 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
V ED ++ QQE + N +NL + + VR + R + +G
Sbjct: 308 VHGVFGEDEAMLKAQQEAIDANPDYEFYNLNIDGGGMWVRRLIERMLVAEG 358
>gi|330808946|ref|YP_004353408.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377054|gb|AEA68404.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
+ L N W+ ++ +L M+ E+P V FR G + + C HR PLH+G +
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKI 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
+QCPYHG + G+C P + + +++ E+ G IW+WPGD P
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGDGSIPKAACVRAFAVAERHGAIWVWPGD--PNLA 119
Query: 172 IPCLLPPSGF------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
L+P F + + + LL DN++DL+H F H T G
Sbjct: 120 NDALIPDFSFFEQAPTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDTLGGG 173
>gi|148557169|ref|YP_001264751.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502359|gb|ABQ70613.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 350
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 38/315 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A++ +++D T++ F P V+ R DG + C HR PL LG + R
Sbjct: 9 NCWYMAAWADEVRD-TLLARRLFGRPIVMARFHDGAAVAFDDRCPHRFAPLSLGRLKGDR 67
Query: 119 IQCPYHGWEYSTDGKC---EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDE--PPTATIP 173
I+C YHG ++ G C + ++ P E+ ++WIWPGD TIP
Sbjct: 68 IECGYHGLQFGRSGACIANPGGGGHFPPGTRTRAYPLVERHRILWIWPGDPALADEGTIP 127
Query: 174 --CLLPPSGFEIHAEIVMELPIEHGLLL--DNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
L+PP+G H I L ++ LL DN++DL H F H + + VK
Sbjct: 128 DLALIPPAGG--HDNIGNYLHVKANWLLETDNIMDLTHVGFLHDGSLGNATMRAAEVKVS 185
Query: 230 TPASGLQGY-WDPYPI---------------DMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
++ W P + ++ + P +++ G PG Q+
Sbjct: 186 EQDGTIRAVLWMPDTLCGFGPMQGQPCDQWNNVVWMAPSIMMMDFGAVPPGAEPIQDKGA 245
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV-LNEDLRLVL 332
A H+ P + + T + S + +P M R +V L ED +V
Sbjct: 246 YA-----FHIFTPETEQSTHYFFGSSGSYGDDEAWIPAMV---REAQSRVFLAEDNPMVE 297
Query: 333 GQQERMNNGANVWNL 347
G +RM G + W+L
Sbjct: 298 GVADRM-GGEDFWSL 311
>gi|56752068|ref|YP_172769.1| hypothetical protein syc2059_d [Synechococcus elongatus PCC 6301]
gi|56687027|dbj|BAD80249.1| unknown protein [Synechococcus elongatus PCC 6301]
Length = 233
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN+W+PVA + + D + C E ++R G + + C HR L G V
Sbjct: 3 LKNYWYPVALAQKVGDRPLSVTLCGEA-IALYRDSAGQIHALSDRCVHRGAALSGGWVEN 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPG-----DE 166
+ CPYHGW+Y G C K+P+ + K+ E+ G++W++ G D
Sbjct: 62 DCLVCPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADR 121
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP +P P+ + E+ + + +NL+D AHAPFTH+ +F
Sbjct: 122 PPLPPLPEYDDPAWRTVQGEVTYT--THYTRVTENLMDFAHAPFTHSGSFGAA 172
>gi|423696631|ref|ZP_17671121.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003531|gb|EIK64858.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
+ L N W+ ++ +L M+ E+P V FR G + + C HR PLH+G +
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKI 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
+QCPYHG + G+C P + + +++ E+ G IW+WPGD P
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGDGSIPKAACVRAFAVAERHGAIWVWPGD--PNLA 119
Query: 172 IPCLLPPSGF------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
L+P F + + + LL DN++DL+H F H T G
Sbjct: 120 NDALIPDFSFFEQAPTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDTLGGG 173
>gi|294011169|ref|YP_003544629.1| putative Rieske protein [Sphingobium japonicum UT26S]
gi|292674499|dbj|BAI96017.1| putative Rieske protein [Sphingobium japonicum UT26S]
Length = 430
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 140/352 (39%), Gaps = 37/352 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK W+ A S+++ + +IFR G +Q+ C HR PL +GS
Sbjct: 76 LKRAWYVAALSSEVDATQLFHRRILGMSVLIFRDAQGEAVALQDRCPHRFAPLSMGSRVG 135
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I CPYHG + G C P QL R ++ P E+ G IWIW +E A P
Sbjct: 136 DAIACPYHGLRFDAGGHCVHNPHGRGQLPRGQVVRGFPLIERHGFIWIWMAEE---AADP 192
Query: 174 CLLPPSG--FEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 226
LLP HA V M+LP+++ L+LDN++DL+H + H +G P +
Sbjct: 193 ALLPDFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITTRGQLSPLIP 252
Query: 227 KFLTPASGLQGYWD-----PYPIDMEF--RPPCMVLSTIGI--SKPGKLE-----GQNTR 272
+ + + WD P I F RP +I + + P ++ Q+
Sbjct: 253 QVEETENSVSASWDYSQTPPIGIFAPFLPRPEEAARHSIRVTWTAPANIQLSIAAAQDDA 312
Query: 273 QCATHLHQ--LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
+ Q LH C P +T + + A + H A + ED +
Sbjct: 313 PFEQGISQYDLHSCTPGDENETHYFFATRRNHAEEDGDYNAFKTAAMHAAFET--EDGPI 370
Query: 331 VLGQQERMNNGANVWN-----LPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 377
+ Q M G + ++ L + VR RL R +GA +L P
Sbjct: 371 IAAAQREM-GGEDFFDLKPMLLSNDLAAVKVRRRLQRAVELEGAMELEDATP 421
>gi|83746974|ref|ZP_00944020.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|207738780|ref|YP_002257173.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
gi|83726394|gb|EAP73526.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|206592148|emb|CAQ59054.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
Length = 342
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++ D + C E V +RG +G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGPEGKMAALEDFCPHRGAPLSLGFVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 172
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 173 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|167647208|ref|YP_001684871.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167349638|gb|ABZ72373.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 347
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 40/318 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++ W+ AF+ ++ D + + P V++R G + + C HR PL +G++ +
Sbjct: 6 LQDAWYQAAFAREIGDKPLA-RTLLDVPIVLYRSA-GKVVALHDRCPHRFAPLSMGALRD 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G+I C YHG + DG+C P L R +++++ P E+ ++WIW GD P L
Sbjct: 64 GQIICGYHGVGFGDDGRCVHNPHGALPRAMRVRAYPVVERHTVVWIWMGDT--RKADPAL 121
Query: 176 LPPSGFEIH----AEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
+P F A I +P + L++DNL+DL+HA + H ++ G +
Sbjct: 122 IPDLSFIDETPETARICFYIPTAANYRLVVDNLMDLSHADYLHPTSLG-GVMTGAEASTE 180
Query: 230 TPASGLQGYWD--------------PYP------IDMEFRPPCMVLSTIGISKPGKLEGQ 269
A G+ W P P + +R P +++ ++ G+
Sbjct: 181 LAADGVVNTWINRNCLAPARFHARVPPPQRADAWTEATWRAPAIMVIGTALAPAGE---- 236
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 329
R+ + LH P + T Y + L V + + L A +NED
Sbjct: 237 -PRRREDEIWALHSMTPETASTTH--YFVCGTRGERLDDVEYSERLRGMLANAFINEDKP 293
Query: 330 LVLGQQERMNNGANVWNL 347
++ QQ RM GA++ +L
Sbjct: 294 MLEAQQARM-GGASLSSL 310
>gi|349574249|ref|ZP_08886206.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
gi|348014197|gb|EGY53084.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
Length = 365
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 135/324 (41%), Gaps = 18/324 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N+W+ A D++ F+ +V+F +G +++ C HR PL G V
Sbjct: 32 LHNYWYIAATERDVRRKPQC-LTLFDRHYVVFHAGNGRFAAMEDRCPHRNAPLSAGKVCN 90
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS---TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
G+I+CPYHGW+++ DG+ ++P+ L ++I ++ C Q+G +W+ PG+ A +P
Sbjct: 91 GQIRCPYHGWQFAADGRLARIPALDGQALPAIRIPTVHCTAQDGYVWLCPGNPATPAPLP 150
Query: 174 C-LLPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
L +G+ P+ L+N LD HA + H S F P
Sbjct: 151 FPHLNEAGWTSFRMRTRFAAPVAQ--CLENFLDCPHAVYVHDSWFRSATGKPVRATLRHL 208
Query: 232 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC------ATHLHQLHVCL 285
A G + ++ P + + + S + + T + H C
Sbjct: 209 ADGAEVEYENEPREQSWVWRLLQNSGTDMRHTDRFIAPATSRVDYRFSDRKHYIITSSCT 268
Query: 286 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNN-GANV 344
P +T + +S + + P ++ ++ + ++ +D+ ++ Q++ + G
Sbjct: 269 PIGENETEVHTVISFRYGRL---GPLVRLVFEPLSRLIIGQDVAIMQRQRDNIRRFGGRE 325
Query: 345 WNLPVGYDKLGVRYRLWRDALEKG 368
D L + WR AL +G
Sbjct: 326 RFYTSEADLLLPAIQAWRQALAEG 349
>gi|409407770|ref|ZP_11256221.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum sp. GW103]
gi|386433521|gb|EIJ46347.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum sp. GW103]
Length = 349
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D + + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIESKPLGRQICGEKIVFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
++ C YHG E DG MP ++R I+S P E+ G IW+WPG++ A I
Sbjct: 63 QLVCGYHGLEMGCDGHTRSMPGQRVRGFPCIRSFPVVERYGFIWVWPGEKEQADPAQIHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWAENPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEGE 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F + P + +GL D P+D F PP V+ +G++ G+
Sbjct: 183 RVITSRFMENIMPPPFWRMALRGNGLA---DDVPVDRWQICRFSPPSHVMIEVGVAHAGQ 239
>gi|428775230|ref|YP_007167017.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
gi|428689509|gb|AFZ42803.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
Length = 440
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 137/328 (41%), Gaps = 42/328 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR--GKDGIPGCVQNTCAHRACPLHLGSVN--E 116
W+P+ DL D + +P I++ G + + C HR PL G V+
Sbjct: 11 WYPLLPVADLVSDRPISTHLLGQPIAIWKPTGSSHYRAFL-DRCPHRLAPLSEGRVDPKT 69
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP 168
G ++C YHGW++ +G C K+P + ++ +LP + W+WP +
Sbjct: 70 GHLECCYHGWQFDENGTCTKIPQAENAELLERNCEQLRATALPTCVANDLFWVWPDPDSA 129
Query: 169 --TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
A P L P GF + + V +LP + L++N+ D +H PF H S
Sbjct: 130 ELAAKTPLSLSPKIDNSKGF-LWSSYVRDLPYDWQTLVENIADPSHVPFAHHGVQGSRES 188
Query: 222 ---VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
+P ++ TP + +P M F PPC + I + K G T
Sbjct: 189 ATPIPMEIREATPERIVAQIDRNFPSTMTFEPPCRLEYAIQLGSEEKQIGLIT------- 241
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQE 336
C+P++ K+R++ + + +FA L+ W H + VL+ D+ L+ Q+
Sbjct: 242 ----YCIPTAPGKSRIVAQFARNFA--LRAKDLTPRWWEHIRLRHLVLDGDMVLLHCQEA 295
Query: 337 RMNNGA---NVWNLPVGYDKLGVRYRLW 361
+ + + +P D+ + +R W
Sbjct: 296 ALREEGHWKSAYMMPTNADRFVIAFRKW 323
>gi|390441204|ref|ZP_10229357.1| Rieske 2Fe-2S family protein [Microcystis sp. T1-4]
gi|422301550|ref|ZP_16388917.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa PCC 9806]
gi|389789389|emb|CCI14550.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa PCC 9806]
gi|389835488|emb|CCI33483.1| Rieske 2Fe-2S family protein [Microcystis sp. T1-4]
Length = 349
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P ++ I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTISAFGKLTP---KVAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|392944484|ref|ZP_10310126.1| ring-hydroxylating dioxygenase, large terminal subunit [Frankia sp.
QA3]
gi|392287778|gb|EIV93802.1| ring-hydroxylating dioxygenase, large terminal subunit [Frankia sp.
QA3]
Length = 373
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++ W PVA S ++ D+ VP EPWVI R DG+ + C HR PL G VN
Sbjct: 12 LRHGWHPVARSGEVADEP-VPVRLLGEPWVIARLDDGL-AAFADRCPHRLAPLSAGRVNA 69
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ C YHGW + G+C +P+ R E+ G+IWI P +EP T
Sbjct: 70 HELVCGYHGWRFVASGECTAVPALGPGVPAPRRARATPPWGVVERHGLIWIAP-EEPFTD 128
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEH----GLLLDNLLDLAHAPFTHTSTFAKG 219
I P E + V P GLL DN LD AH PF H T G
Sbjct: 129 LIEV---PEADEAGFDSVWLEPSRSSACAGLLADNFLDTAHFPFVHADTIGAG 178
>gi|302187358|ref|ZP_07264031.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae 642]
Length = 354
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R +D V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQDQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEE---LTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|148239148|ref|YP_001224535.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
gi|147847687|emb|CAK23238.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
Length = 440
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 30/306 (9%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVN-EGR 118
W+PVA+ DL F E V++ G + C HR PL G +N G
Sbjct: 9 WWPVAYLRDLDPKRPQRFTVLERDLVLWWDASIGSWRAFDDVCPHRLVPLSEGRINASGE 68
Query: 119 IQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT--- 169
++CPYHGW + +G+C ++P + R SLP +G++++W GD PT
Sbjct: 69 LECPYHGWSFDGEGRCTRIPQMAEGANASGRRSSCNSLPTCSGQGLLFVWTGD--PTMAG 126
Query: 170 ATIPCLLP-----PSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
A P L+P G+ I + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 AKDPPLVPLLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKTVGNREN 186
Query: 222 VPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
++ + SG + +W+ P R + S P + + +
Sbjct: 187 AAPVLAVIRAENDSGFEAFWEEGP-----RRGRLGSQFTHFSAPQLMWHDLDAKGFARIL 241
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQER 337
+ +P R + RL R F S L V +H + ED ++ L QER
Sbjct: 242 TVVYAVPIRRGECRLFARFPFQFKSALPRLLVGLRPRWLQHIGNHKVLEDDQVFLHWQER 301
Query: 338 MNNGAN 343
+ A
Sbjct: 302 VLESAG 307
>gi|428223044|ref|YP_007107214.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427996384|gb|AFY75079.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 331
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKNFW+ + S +L+ + VI+R + P + N C HR L G V +
Sbjct: 2 LKNFWYAICLSKELESKP-IGITALGSDLVIYRNSNNEPIVMSNLCVHRGASLSSGWVKQ 60
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD-----E 166
I CPYHGWEY +DG C K+PS + ++ + P E+ G+IW + GD
Sbjct: 61 DCIVCPYHGWEYKSDGSCIKIPSYKENVPIPNKARVLTYPTQEKYGLIWAFIGDISESER 120
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP P ++ + + + + ++N +D+AHAPF H +F
Sbjct: 121 PPIPIFSEYDDPKYKKLWGDYSWD--VNYTRAVENGIDIAHAPFVHAGSFG 169
>gi|428223387|ref|YP_007107557.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
gi|427996727|gb|AFY75422.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
Length = 455
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 28/337 (8%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 105
+G P K W+PV++ TDL+ F ++ V++ ++ + C HR
Sbjct: 21 AGGTDPAYFDPKEAWYPVSYITDLERTKPTAFTLLDQDLVLWWDQNNKTWRAFADQCPHR 80
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 157
L G + E G I+CPYHGW + +G C+++P + Q +KS +G
Sbjct: 81 LARLSEGRIAEDGLIECPYHGWAFKGNGSCDRIPQKVKGGTAEQSSRACVKSYATATAQG 140
Query: 158 MIWIWPGDEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
++++ G+ +P + P + + +LP + LL+N+LD +H PFTH
Sbjct: 141 LLFVCLGEYASQVKVPIIDALEQSPEAW-VCLNTFRDLPYDASTLLENVLDSSHLPFTHH 199
Query: 214 STFAKGWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 271
+ + + LT + SG G W P + T+ I+ +
Sbjct: 200 ESVGNRANAAPVELELTRSDKSGFTGVWAEGPR----KGTLGTQDTVFIAPNLMWHDLTS 255
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLR 329
+Q + ++ P + + RL R F+S + + + H + + ED +
Sbjct: 256 KQFGVTMTVVYAT-PMRKGECRLFARFPFQFSSKIPEFFIKLTPQWFSHINQNAILEDDQ 314
Query: 330 LVLGQQERM-----NNGANVWNLPVGYDKLGVRYRLW 361
+ L QER N A + LP D + YR W
Sbjct: 315 IFLHHQERYLELQKTNFAQAYYLPTKADLFVIEYRKW 351
>gi|375093382|ref|ZP_09739647.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
gi|374654115|gb|EHR48948.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
Length = 354
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 45/286 (15%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T +N W+ A+S ++ + + P EP V +R + G + + C HR PL
Sbjct: 2 TTFARNQWYVAAYSREIGRE-LFPRTILGEPIVFYRTEAGEAVALADRCVHRRYPLSESR 60
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGD------ 165
++ +I C YHG+ Y G C +P T++ R ++ S P EQ+ +W+W GD
Sbjct: 61 LDGDKIVCGYHGFTYDKAGSCVFVPGQTRIPRTARVPSYPLVEQDSFVWVWIGDHDKADP 120
Query: 166 ----EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF----- 216
P + P SG E L + LL+DNL+DL+H + H
Sbjct: 121 ALIPRAPWLSDPAYTTVSGME-------PLAARYDLLVDNLMDLSHETYLHGGYIGTPEV 173
Query: 217 ------------------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTI 258
++ + F ++G++G + D+E+ PPC+ L
Sbjct: 174 ANTPISTEVDEEKEVIYVSRHMADAECPSFYAKSTGIEGRITRWQ-DIEYHPPCLYLLHS 232
Query: 259 GISKPGKLEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
++ G L + T A H+ ++ P + T + ++ DFA
Sbjct: 233 RVAPVGVLPADDGTDPDAFHVEVVYAITPETEHSTHDFWAVARDFA 278
>gi|172036878|ref|YP_001803379.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354554681|ref|ZP_08973985.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171698332|gb|ACB51313.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353553490|gb|EHC22882.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 465
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 127/298 (42%), Gaps = 23/298 (7%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+PV + DL F E+ VI+ ++ CV + C HR PL G +NE
Sbjct: 27 QEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDENNSQWCVFDDQCPHRLAPLSQGRINE 86
Query: 117 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DE 166
G ++CPYHGW +S G CE +P + Q +K+ P +G+++++ G +
Sbjct: 87 SGCLECPYHGWAFSGQGNCEVIPQQKPEGKAEQSPRASVKTYPTKVAQGLLFVYAGKTEN 146
Query: 167 PPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV- 222
P IP L S + ++P + L++N+LD +H P+TH + +V
Sbjct: 147 APKTPIPLVDVLDEKSDEWVCINTFRDIPYDALTLMENVLDSSHIPYTHHKSVGNRSNVS 206
Query: 223 PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
P ++ + G +G W+ P R + T PG + T + +
Sbjct: 207 PVDLEVVESGKWGFKGVWEEGP-----RKGTLGKQTTYFFAPGMMYHDLTSKQFGRTLTV 261
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQER 337
P + K RL R F+S + + + H + + ED ++ L QER
Sbjct: 262 VYATPIGKGKCRLFARFPFKFSSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLHYQER 319
>gi|154249242|ref|YP_001410067.1| Rieske (2Fe-2S) domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153178|gb|ABS60410.1| Rieske (2Fe-2S) domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 324
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 114
+KN W+ V S ++K ++ F E ++R + G C+ + C HR + G +
Sbjct: 2 IKNQWYIVLSSKEVKKGELIGVTRFGEKLALWRDEAGKVHCISDVCCHRGASISHGKILS 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
N R+ CP+HG+EY + G+ +P+ N K+K+ +E IWIW GD PT
Sbjct: 62 NGERVMCPFHGFEYDSTGRVCVIPANGRNTPVNENFKVKAYHTYELADFIWIWYGDGEPT 121
Query: 170 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP+ FE ++E + + ++N LD+ H PF H +T +G
Sbjct: 122 N------PPTYFEDITDDLSYSEFKEVWNVHYSRAIENQLDVVHVPFVHYNTIGRG 171
>gi|126656429|ref|ZP_01727690.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
gi|126622115|gb|EAZ92822.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
Length = 466
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 135/341 (39%), Gaps = 30/341 (8%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAH 104
+ G P K W+PV + DL F E+ VI+ K CV + C H
Sbjct: 15 IIGGNDPDQFDWKEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDKKNSQWCVFDDQCPH 74
Query: 105 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQE 156
R PL G +NE G ++CPYHGW +S G CE +P + Q + + +
Sbjct: 75 RLAPLSEGRINESGCLECPYHGWAFSGQGNCEVIPQQKPEGNAEQSPRASVNTYSTKVAQ 134
Query: 157 GMIWIWPGDEPPTATIPCLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFT 211
G+++++ G A P L E E V ++P + L++N+LD +H P+T
Sbjct: 135 GLLFVYAGKTENAAKTPIPLVDVLEESSREWVCLNTFRDIPYDALTLMENVLDSSHIPYT 194
Query: 212 HTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
H + +V P ++ + G +G W+ P R + T PG +
Sbjct: 195 HHKSVGNRSNVSPVDLEVVESGKWGFKGVWEEGP-----RKGTLGKQTTHFFAPGMMYHD 249
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNED 327
T + + P S+ K RL R F S + + + H + + ED
Sbjct: 250 LTSKQFGRTLTVVYATPISKGKCRLFARFPFKFCSPIPKFFINLTPRWYSHIGQNGVLED 309
Query: 328 LRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
++ L QER +N + + LP D + W
Sbjct: 310 DQIFLHYQERYLEKKGGSSNVSKAFYLPTKADLFVFQLHSW 350
>gi|328544481|ref|YP_004304590.1| vanillate O-demethylase oxygenase [Polymorphum gilvum SL003B-26A1]
gi|326414223|gb|ADZ71286.1| Vanillate O-demethylase oxygenase, iron-sulfur subunit (Modular
protein subunit from monooxygenase) (VanA-like)
[Polymorphum gilvum SL003B-26A1]
Length = 348
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 129/336 (38%), Gaps = 51/336 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + C +P V++R G + + C HR PL G +N
Sbjct: 9 NAWYAAAYDVEVGRSLLARKIC-NKPIVMYRKTTGEAVALADACWHRLVPLSGGELNGDN 67
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ CPYHG E+ G+C MPS + N +KS P E+ +WIWPGD P P +
Sbjct: 68 VICPYHGLEFDDSGRCVYMPSQETINPSACVKSYPVVEKHRFVWIWPGD--PALADPAKV 125
Query: 177 P-----------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
P G IH + ++ L++DNL+DL H F H S+ G +
Sbjct: 126 PDMHWINDPEWAADGKRIH------VKCDYRLVVDNLMDLTHETFVHGSSI--GNRAVAE 177
Query: 226 VKFLTPASGLQGYWDPYPIDME----------------------FRPPCMVLSTIGISKP 263
F T + + ID++ F+ P + +G++
Sbjct: 178 APFQTTHTDRTATVTRWMIDIDAPPFWAGQLGRKEHVDRWQIIHFQAPSTICIEVGVAPT 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G Q R L+ P + K + + + H + R V
Sbjct: 238 GTGAPQGDRSKGVEGMVLNTMTPETDKTCHYFWAFARHYDI---HNQARTHQLREGVSTV 294
Query: 324 LNEDLRLVLGQQERMNNGAN--VWNLPVGYDKLGVR 357
ED ++ QQ+ +++ + +NL + + R
Sbjct: 295 FREDEAVLEAQQKAIDDNPDHVFYNLNIDAGSMWAR 330
>gi|434384793|ref|YP_007095404.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428015783|gb|AFY91877.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 333
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ FW+PV + DL PF + V++ +G P ++ C HR+ L LG V
Sbjct: 9 FRKFWYPVIPTADLLGSPQ-PFTLLGQKIVLWLDAEGKPAAAKDRCCHRSAQLSLGKVVN 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGDEPPTA 170
G I CPYHGW++ + G+C +P QL++V +I++ C E+ G W+ + P A
Sbjct: 68 GAIACPYHGWQFDSSGRCVCVP--QLKDVGIPAAARIETYRCTEKYGYAWVCLDE--PIA 123
Query: 171 TIPCLLPP--SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 227
IP + S F + E +++N LDLAH F HT+TF ++ P ++
Sbjct: 124 EIPHIAEAFESDFRLIPEFYETWKCAGLRVMENELDLAHPTFVHTTTFGSEDHPTPDRLE 183
Query: 228 FLTPASGLQGY 238
SGL+ +
Sbjct: 184 ITETPSGLRAH 194
>gi|427720788|ref|YP_007068782.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427353224|gb|AFY35948.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 59/345 (17%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+PV+ DL P VI++ K V + C HR PL G +++ G
Sbjct: 11 WYPVSPIEDLDSQRPNPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSEGRIDDKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEP-- 167
+ C YHGW++ G C +P + +N+ +LP ++ ++W+WP +
Sbjct: 71 NLMCTYHGWQFDAQGICTHIPQAENPQLVTKNQQNLCAVTLPTRQENDLLWVWPDAKSVE 130
Query: 168 PTATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS-------- 214
A P L P GF + V +L + L++N+ D +H PF H
Sbjct: 131 QAAITPLPLSPQIDANKGF-VWNSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRDKA 189
Query: 215 ---TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 271
+ + S SL++ T + + + F PPC + I I K G T
Sbjct: 190 RPISLSIEESTASLIEVSTAGN--------FSTKITFEPPCRLEYAINIGNSDKKMGLVT 241
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLR 329
C+P S K+R++ + +FA L F+ W H + VL+ D+
Sbjct: 242 -----------YCIPVSPGKSRIVAQFPRNFAQTLHR--FIPRWWDHITNRNLVLDGDMI 288
Query: 330 LV------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
L+ L Q++ + + LP D+L + +R W D +G
Sbjct: 289 LLSQQEYFLQQRQLTESWKTAYKLPTSADRLVIEFRNWFDKYCQG 333
>gi|325272616|ref|ZP_08138975.1| Rieske (2Fe-2S) iron-sulfur domain [Pseudomonas sp. TJI-51]
gi|324102258|gb|EGB99745.1| Rieske (2Fe-2S) iron-sulfur domain [Pseudomonas sp. TJI-51]
Length = 357
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A T+L + + E V++R DG P +++ C HR PL LG
Sbjct: 3 MRNAWYVAASETELGEQ-LFAVKLLNEAVVLYRKGDGTPVALEDACPHRKLPLSLGRRQG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIP 173
I+C YHG + G C + P ++ + K++S P + G+IWIW GD E A+
Sbjct: 62 DDIECGYHGLTFDCSGSCVRAPGSKHVPQGAKVRSYPLAVRYGLIWIWMGDAELADASKI 121
Query: 174 CLLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
C +P G + ++ M +P + + DNLLD +H + H S+F
Sbjct: 122 CHVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPSHVAWVHQSSFGSA 170
>gi|318040272|ref|ZP_07972228.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
CB0101]
Length = 437
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 41/309 (13%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVI-FRGKDGIPGCVQNTCAHRACPLHLGS 113
T + W+ VAF DL PF E V+ F G + + C HR PL G
Sbjct: 9 TSWTHAWYAVAFLRDLDPKRPTPFTLMGEDLVLWFERSSGQWRALADVCPHRLVPLSDGR 68
Query: 114 VNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-----KIKSLPCFEQEGMIWIWPGDEP 167
+NE G ++CPYHGW ++ +G+C +P Q + + +G+++++ GD
Sbjct: 69 LNEAGELECPYHGWTFNGEGRCTAIPQAQEGSTISPRSHCRGYATATGQGLLFVFSGDIA 128
Query: 168 PTATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
A P L P G+ + + +LP++ LL+N+LD++H PFTH +T + +
Sbjct: 129 EAADHPLPLVPEIDQPGWLVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHATVGRRENAG 187
Query: 224 SLVKFLTP--ASGLQGYWDPYP----IDMEFR---PPCMVLSTIGISKPGKLEGQNTRQC 274
+ L G G W P + EF PC++ + T +
Sbjct: 188 PVELELNSFGPEGFTGVWQEGPRRGKLGSEFTTYAAPCLMWHEL------------TAKG 235
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDF-----ASVLKHVPFMQYLWRHFAEQVLNEDLR 329
+ + P R + RL+ R F A +L+ P ++L +H V+ ED +
Sbjct: 236 FARIFTVVYATPIRRGECRLITRFPFKFNSPWPARLLRLRP--EWL-QHLGNHVVLEDDQ 292
Query: 330 LVLGQQERM 338
L L QER+
Sbjct: 293 LFLHWQERV 301
>gi|219130881|ref|XP_002185582.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217402990|gb|EEC42947.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 498
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 50/346 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--EGR 118
W P+A +L D P + +V ++ DG + C HR PL G V+ + R
Sbjct: 61 WVPLASVYELHPDRPTPLRFLGQSYVTYQSNDGQWAVFDDACPHRLAPLSEGRVDRQKNR 120
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK---------IKSLPCFEQEGMIWIWP-GDEPP 168
++C YHGWE+ DG+C+++P ++ +KS P ++ ++++WP DE P
Sbjct: 121 LECSYHGWEFDADGRCQEIPQADFSTMQKAMQNERCHVKSYPVHVEKNILFVWPWADEDP 180
Query: 169 TATI--PCLLPPSGFEIHAE----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW-S 221
T+ P P E +E +LP LL+N++D +H PF H K +
Sbjct: 181 LITVSQPHCAPEHFMEGVSENCTTYTRDLPYGWDTLLENIVDPSHVPFAHHGLQGKREDA 240
Query: 222 VPSLVKFLTPA----SGLQGYWDPYPIDME------FRPPCMVLSTIGISKPGKLEGQNT 271
+P + +P+ G ++ + M FR P ++ P K E Q
Sbjct: 241 IP--INMTSPSDLSPEGFVFQFEDRTMSMRRQGGAVFRAPFVIHYKADFETPSK-EKQKK 297
Query: 272 RQCATHLHQL-HVCLPSSRKKTRLLY------------RMSLDFASVLKHVPFMQYLWRH 318
R + + L + LP+ +R++ A + + +P +L
Sbjct: 298 RANSPKVFNLTAIMLPTKPGWSRIILMGAPRTKQIEKKEKERLVAKIFRKLP--SWLVHT 355
Query: 319 FAEQVLNEDLRLV-LGQQERMNNG--ANVWNLPVGYDKLGVRYRLW 361
F+ + L+ DL + +QER G A + +P D+ R W
Sbjct: 356 FSNRFLDSDLAFLHFQEQERERRGVDARAYFMPAQSDRCVSALRKW 401
>gi|428772546|ref|YP_007164334.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
gi|428686825|gb|AFZ46685.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
Length = 465
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 49/315 (15%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLG 112
N + W+PV F DL+ + F EE VI+ K + C HR PL G
Sbjct: 24 NFNYQEVWYPVFFVEDLEKNRPNSFTLLEEDIVIWWEEKTSQWRVFTDKCPHRLAPLTEG 83
Query: 113 SVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGMIWIWPG 164
+NE G ++CPYHGW +S +G CE +P Q +++ PC ++ +++++ G
Sbjct: 84 RINEEGLLECPYHGWAFSGEGDCEVIPQQQENQRAHTSSRACVRAYPCKVEQDLLFVYAG 143
Query: 165 -----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
D+ P + L + ++P LL+N+LD +H P+TH +
Sbjct: 144 NPDNADKTPIPIVGPLEEDKDKWLVLNTFRDIPYSALTLLENVLDSSHIPYTHHGSVGDR 203
Query: 220 WSVPSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+V ++ + ++ G G W P + GKL Q T A +
Sbjct: 204 TNVSTVELEIISSNRQGFNGVWQEGP------------------RKGKLGSQYTTFVAPN 245
Query: 278 L--HQLH-----------VCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQ 322
L H L P S+ K RL R F+S + + + H +
Sbjct: 246 LMWHDLTSKQFGRTMTVVYATPISKGKCRLFARFPFQFSSKIPQFFIKLTPRWYSHLNQN 305
Query: 323 VLNEDLRLVLGQQER 337
+ ED ++ L QER
Sbjct: 306 AILEDDQIFLHYQER 320
>gi|390575016|ref|ZP_10255123.1| vanillate monooxygenase [Burkholderia terrae BS001]
gi|389932818|gb|EIM94839.1| vanillate monooxygenase [Burkholderia terrae BS001]
Length = 349
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 128/317 (40%), Gaps = 49/317 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+S D+ D + + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNTWYAAAWSRDVGAD-LSTRELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I+C YHG ++ G C K P R +++S P ++ G++WIW G+ P+
Sbjct: 63 DGIECGYHGLQFDCSGACSKNPHGDGRIPPGARVRSFPAEDRHGLVWIWAGE--PSRADA 120
Query: 174 CLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLA-----HAPFTHTSTFAK----- 218
L+P + + M + L++DNL+DL+ HAP+ H F +
Sbjct: 121 SLIPDFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLHAPYQHVDDFLQAKHDV 180
Query: 219 --------------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
G P S FL YW +++ + P L G+
Sbjct: 181 VQDGSALESRRTVAGTRAPQSFRPFLDDPDAPVDYW----LNIRWHAPGCCLLETGVVPV 236
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS----LDFASVLKHVPFMQYLWRHF 319
G+ + T H+ P T+ LY S LD Q + H
Sbjct: 237 GRPREHGLVRIGT-----HIVTPIGAASTQYLYASSRNYRLDDPDADDETARWQQMGFHE 291
Query: 320 AEQVLNEDLRLVLGQQE 336
++ + E ++ +G++E
Sbjct: 292 QDKPMIEGVQTRMGERE 308
>gi|409400349|ref|ZP_11250444.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
gi|409130634|gb|EKN00384.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
Length = 342
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ A +L + + C E+ V +RG G V++ C HR PL LG V +
Sbjct: 3 LKNAWYVAAMPDELAETPLGRTICGEK-MVFYRGAGGKVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIP 173
G++ C YHG +GK +MP ++ IKS E+ G IW+WPGD+ ATI
Sbjct: 62 GKLVCGYHGLAMGCEGKALEMPGQRVNGFPAIKSYAVEERYGFIWVWPGDKAKADPATIH 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H + +
Sbjct: 122 HLEWAVNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHAGSIGQ 167
>gi|227015885|gb|ACP17982.1| putative vanillate-O-demethylase oxidoreductase a-subunit
[Pseudomonas nitroreducens]
Length = 354
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIADKPLGRQICNEKIVFYRGAEGRVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E +GK MP +++ IKS E+ G IW+WPGD P L+
Sbjct: 63 KLICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 227
+ + E + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 121 HHLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVE 180
Query: 228 -----------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
F A G D P+D F PP VL +G++ GK
Sbjct: 181 GDTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239
>gi|425458836|ref|ZP_18838322.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9808]
gi|389823864|emb|CCI27654.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9808]
Length = 349
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|254409954|ref|ZP_05023734.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182990|gb|EDX77974.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 446
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 50/336 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 118
W+PV + DL F VI+ K V + C HR PL G + E G
Sbjct: 11 WYPVHYLKDLDQSQPTQFTLLGRDLVIWWDKVADRWRVFDDQCPHRLAPLSQGRIAEDGL 70
Query: 119 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPT 169
++CPYHGW ++ G C+++P + + + +LP E +G+++++PG + P
Sbjct: 71 LECPYHGWAFTGAGTCDRIPQQTEDSSAQTSQRACVTALPTTECQGLLFVYPGNPENAPN 130
Query: 170 ATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPS 224
+P + P P G+ + + +LP + LL+N+LD++H PFTH + + + ++ P
Sbjct: 131 VKVPIVEPLDDSPEGW-VCIDTFRDLPYDALTLLENVLDVSHVPFTHHRSVSDRAYASP- 188
Query: 225 LVKFLTPASGLQGY---WDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
V+ SG QG+ W+ P D F P ++ + + G+
Sbjct: 189 -VELEVTESGKQGFKGVWEQGPRKGTLGRQDTTFLAPTLMWHDLTSKQFGR--------- 238
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVL 332
+ P + + RL R FAS L + + H + + ED ++ L
Sbjct: 239 ---TMTVVYATPIRKGECRLFARFPFKFASKLPGFFIKLTPRWYSHIGQNGVLEDDQIFL 295
Query: 333 GQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
QE N + + LP D+ R W
Sbjct: 296 HYQEHYLESKGGSANFSKAFYLPTKADRFVFELRQW 331
>gi|398860648|ref|ZP_10616294.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
gi|398234418|gb|EJN20293.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
Length = 348
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ + G +W D P+D F PP VL +G++
Sbjct: 176 VTTVDGDEVVTARHMENIMPPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G RQ + P + + M+ +F + R
Sbjct: 236 HAGHGGYHAPRQFKASSIVVDFITPQTETSIWYFWGMARNFNP---QDEALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLSHPARNLLKLNIDAGGVQSR 330
>gi|398993794|ref|ZP_10696729.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133702|gb|EJM22887.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 352
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V+N C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIVSKPLGRQICGEKI-VFYRGHEGRVAAVENFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQDKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ +QG +W D P+D F PP VL +G++
Sbjct: 176 LTTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTDTIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLDMLEQQQQNLLANPERNLLKLNIDAGGVQSR 330
>gi|407713704|ref|YP_006834269.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235888|gb|AFT86087.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 347
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 42/274 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ + DL D ++ +E +++R ++G+ + N C HR PL G
Sbjct: 4 LRNTWYCAGWGADLGQDDLIDRTILKESVLLYRKQNGLAVAIGNRCPHRFAPLSSGCKKG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA--- 170
+ CPYHG + G+C P T + ++ P E+ +WIW GD P A
Sbjct: 64 DNVACPYHGLTFGPSGECVLNPHGDGTTPKAARVTRYPLVERYDALWIWMGD-PELADAD 122
Query: 171 TIPCLLPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 219
IP S E H +E+P+ + LL DNLLDL+H P+ H A+G
Sbjct: 123 EIPDFSESSLREGWGHIRGHLEVPVHYELLTDNLLDLSHVPYLHPFLSAQGPQPDGFREE 182
Query: 220 ----------WSV-PSLVKFLTPASGLQGYWDPYP------IDMEFRPPCMVLSTIGISK 262
WS+ +L TP L W+ P DM + P +L GIS
Sbjct: 183 RELKQDGNTVWSMHRNLNTVTTPLFRL--LWEDAPEVIEGYFDMRWTAPSNLLLRAGIS- 239
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
++G+ R+ + H+ P++ T +
Sbjct: 240 --AMDGR--REDGARIPMAHLLTPATETHTHYFW 269
>gi|425469857|ref|ZP_18848759.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9701]
gi|389880265|emb|CCI38966.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9701]
Length = 349
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPV 340
>gi|294667229|ref|ZP_06732450.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603010|gb|EFF46440.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 358
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 127/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDMVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFE 183
Query: 218 -----KGWSVPSLVKFLTP----------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 262
+ V ++ + P G G D + I + F P + +G++
Sbjct: 184 VVHGDRSVIVSRWMRNIEPPPFWASQMALHRGYHGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + + ++A H M R+
Sbjct: 243 TGTGAPEGDRSQGVNAYVLNTVTPETDRTCHYFWAFMRNYA---LHDQSMTTTTRNAIAG 299
Query: 323 VLNEDLRLVLGQQERMN 339
+ ED ++ QQ ++
Sbjct: 300 IFGEDEVVLEAQQRAID 316
>gi|167645029|ref|YP_001682692.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. K31]
gi|167347459|gb|ABZ70194.1| Rieske (2Fe-2S) domain protein [Caulobacter sp. K31]
Length = 387
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 45/189 (23%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--- 115
+ W+ A S DLK M + EP +I R + G +++ C HRA L G V+
Sbjct: 35 DTWYMAALSPDLKPGKMEGREFLGEPVLIGRTRAGAVYALRDVCPHRAAKLSAGKVHAEA 94
Query: 116 --------EGR---IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGM 158
GR ++CPYHGW + TDG C K+PS + V++K+ P E +G+
Sbjct: 95 PNGENRGENGRRETVECPYHGWRFHTDGACAKIPSLTAADPLDVSKVRVKTYPLVESQGL 154
Query: 159 IWIW----------PGDEPPT-----ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 203
+WIW P + PPT P L+ ++IH I+H +L L+
Sbjct: 155 VWIWMSADPRFDGQPSEPPPTIPGVVGGKPKLVDHLDYDIH--------IDHAVL--GLI 204
Query: 204 DLAHAPFTH 212
D AH PF H
Sbjct: 205 DPAHGPFVH 213
>gi|390575204|ref|ZP_10255311.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
gi|389933006|gb|EIM95027.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
Length = 357
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ D+ M P EP V++R +DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAWDADVTHKLM-PVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPG--DEPPTATI 172
+++C YHG + +G C + P + K++S P E+ G++WIW G DE ATI
Sbjct: 62 DQVECGYHGLTFDCEGACVRAPGSPRIPPGAKVRSYPLAERYGLLWIWMGDADEADAATI 121
Query: 173 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 122 VQIDEWGDPAWGVNRGDAMTVECHYLYVTDNLLDPSHVAWVHPSSFGNAACEAEPLKTEV 181
Query: 231 PASGL 235
A G+
Sbjct: 182 AAHGV 186
>gi|325929238|ref|ZP_08190374.1| vanillate demethylase subunit A [Xanthomonas perforans 91-118]
gi|325540377|gb|EGD11983.1| vanillate demethylase subunit A [Xanthomonas perforans 91-118]
Length = 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGTVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+G V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVIVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 AGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRDGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|414172135|ref|ZP_11427046.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
gi|410893810|gb|EKS41600.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
Length = 343
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+PV ++ D + EEP VI+R +DG +Q+ C HR PL LG +
Sbjct: 4 VTNAWYPVVWA-DRVGRELTRHVVLEEPIVIYRLEDGSIAALQDACPHRLAPLSLGKLKG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHG + GKC +P + N ++S P + G++W+W GD P A +
Sbjct: 63 DNIECGYHGMTFDCSGKCVLIPGQDVIPGNALVRSYPLQIKYGLVWLWMGD-PKKADLSK 121
Query: 175 LLPPSGFEI---HAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFA--KGWSVP 223
+ +E HA L IE + L DNLLD AH F HT+T G +VP
Sbjct: 122 MFHLPQYEAEGWHAVQGDTLRIECNYLSLCDNLLDPAHVTFVHTTTLGTPAGATVP 177
>gi|254489200|ref|ZP_05102404.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
gi|214042208|gb|EEB82847.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
Length = 355
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ +STD DD +VP + V+FR DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDD-LVPLTLLAQNIVVFRCSDGQLAALEDRCPHRLLPLSKGKRIG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
IQC YHG + G+C ++P S + + S P E+ G+++IW GD T
Sbjct: 63 DTIQCGYHGMTFDAGGQCVRVPGQSNLPTSAYVDSFPVLERHGIVFIWMGDAEKADTALA 122
Query: 175 L----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 227
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 123 FDMPELSEDGWHLHHGDKLHIKANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVK 181
>gi|443323888|ref|ZP_21052865.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796320|gb|ELS05613.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 23/309 (7%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHR 105
+G + + +K W+PVA+ DL F E V++ K + C HR
Sbjct: 12 AGGTEATSFDVKEAWYPVAYLDDLDKTKPTTFTLLEIDLVLWWDAKSQSWRAFVDQCPHR 71
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS-------LPCFEQEG 157
L G +NE G ++CPYHGW +S G CE +P N S P +G
Sbjct: 72 LASLSEGRINEQGLLECPYHGWSFSGSGNCEDIPQQSATNQANTSKRACATAYPTQTAQG 131
Query: 158 MIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+++++PG +P + E + ++ +LP + LL+N+LD++H P+TH
Sbjct: 132 LLFVYPGKAAMANQVPVPIVEPIEESPEEWVCLDLFRDLPYDALTLLENVLDVSHVPYTH 191
Query: 213 TSTFAKGWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
T +K + + +T + +G QG W+ P E T I+
Sbjct: 192 HKTVSKRSNAAPVDLAVTQSDKNGFQGVWEEGPRKGELG----TQYTSFIAPSLMWHDLT 247
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDL 328
++Q L ++ P + + RL R FAS + + + H + + ED
Sbjct: 248 SKQFGRTLTVVYAT-PIRKGQCRLFARFPFKFASPIPAFFIKLTPRWYSHVNQHTVLEDD 306
Query: 329 RLVLGQQER 337
++ L QER
Sbjct: 307 QIFLHHQER 315
>gi|420249650|ref|ZP_14752889.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398063536|gb|EJL55262.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 357
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ D+ M P EP V++R +DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAWDADVTHKLM-PVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPG--DEPPTATI 172
+++C YHG + +G C + P + K++S P E+ G++WIW G DE ATI
Sbjct: 62 DQVECGYHGLTFDCEGACVRAPGSPRIPPGAKVRSYPLAERYGLLWIWMGDADEADAATI 121
Query: 173 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 122 VQIDEWGDPAWGVNRGDAMTVDCHYLYVTDNLLDPSHVAWVHPSSFGNAACEAEPLKTEV 181
Query: 231 PASGL 235
A G+
Sbjct: 182 AAHGV 186
>gi|285019794|ref|YP_003377505.1| vanillate o-demethylase oxygenase subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283475012|emb|CBA17511.1| probable vanillate o-demethylase oxygenase subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 38/271 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ +A+ ++K + C E V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAIAWDHEVKHALLARKICNLEI-VLYRTSSGHVAALEDACWHRLVPLSMGRLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG Y +G+C MPS N ++ P E+ +W+WPGD P L+
Sbjct: 70 VVCGYHGLAYDANGRCVHMPSQDTINPAACVRRFPTVERHRYVWVWPGD--AALADPALV 127
Query: 177 PP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG----------- 219
P G+ + + ++ L+LDNL+DL H F H S+ +
Sbjct: 128 PDLHWNDDPGWAGDGRTIA-IKCDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFDVVH 186
Query: 220 ---------WSV-----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
W + P L A G +G D + I + F PC + +G++ G
Sbjct: 187 GERSVVVSRWMLEIDPPPFWAWQLEHAHGYRGKVDRWQI-IRFEAPCTIAIDVGVAVAGS 245
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
Q R + + L+ P + + +
Sbjct: 246 GAPQGDRSRGVNGYVLNTVTPETERSCHYFW 276
>gi|407713699|ref|YP_006834264.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407235883|gb|AFT86082.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 350
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 49/339 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A+S +++ D + P +++R + G + + C HR PL LG
Sbjct: 3 IRNTWYVAAWSHEVEGDKLFSRTIINTPVMLYRKESGEVIALADRCCHRGAPLSLGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG ++ + G C + P+ + + K++ P EQ IWIW G+ P P
Sbjct: 63 DCVRCMYHGLKFDSQGACIEAPAQERIPLHAKVRQFPVVEQHRWIWIWMGE--PELADPS 120
Query: 175 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 219
+P + + + + + + L+ DNLLD +H P+ H +T G
Sbjct: 121 TIPDTHWVDDPQWRSLPGYIHYDVNYLLICDNLLDFSHLPYVHPTTLGGGEDYAAVRPKV 180
Query: 220 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
W++ P VK + G W+ Y +F P ++ G++ G
Sbjct: 181 ERIKDGVRITRWTLNTEPPPFVKAVRDWPGNVDRWNIY----DFTIPAILRMDSGMAPVG 236
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYLWRHFA 320
+ R A H P + T + SLD V + +
Sbjct: 237 TGAPEGKRVDAAEFHGCQALTPETEGSTHYFFAHPHNFSLDKPEVTRSI-------HQSV 289
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ED +V Q + + +P G D ++R
Sbjct: 290 VDAFDEDREMVSAQHRNLALDPDFKMMPFGIDAALSQFR 328
>gi|390167216|ref|ZP_10219213.1| putative Rieske protein [Sphingobium indicum B90A]
gi|389590161|gb|EIM68162.1| putative Rieske protein [Sphingobium indicum B90A]
Length = 430
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK W+ A S+++ + +IFR G +Q+ C HR PL +GS
Sbjct: 76 LKRAWYVAALSSEVDATQLFHRRILGMSVLIFRNAQGEAVALQDRCPHRFAPLSMGSRVG 135
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I CPYHG + G C P QL R ++ P E+ G IWIW +E A P
Sbjct: 136 DAIACPYHGLRFDAGGHCVHNPHGRGQLPRGQVVRGFPLIERHGFIWIWMAEE---AADP 192
Query: 174 CLLPPSG--FEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 226
LLP HA V M+LP+++ L+LDN++DL+H + H +G P +
Sbjct: 193 ALLPDFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITTRGQLSPLIP 252
Query: 227 KFLTPASGLQGYWD 240
+ + + WD
Sbjct: 253 QVEETENSVSASWD 266
>gi|317970428|ref|ZP_07971818.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CB0205]
Length = 432
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 55/317 (17%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRACPLHLG 112
+ R +N WFPVAF DL + PF + V++ + + C HR PL G
Sbjct: 3 SNRWQNAWFPVAFLRDLDRNRPTPFTLVGQDLVLWFDRQADEWRAFADVCPHRLVPLSDG 62
Query: 113 SVNE-GRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPG-- 164
+N G ++CPYHGW + G+C P S+ +S +G+++++ G
Sbjct: 63 RLNAAGELECPYHGWSFDGSGRCTLQPQAEPGSSISGRSHCRSYATACAQGLLFVFSGPS 122
Query: 165 ---DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
E P +P +L +G+ + + +LP++ LL+N+LD +H PFTH +T + +
Sbjct: 123 EQAREQPLPLVP-VLDEAGWVVQ-DTFRDLPMDALTLLENVLDASHVPFTHHATVGRREN 180
Query: 222 VPSLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL- 278
+ LT G G W+ P + GKL Q+TR A L
Sbjct: 181 AAPVALALTGFDRDGFTGLWEEGP------------------RRGKLGSQHTRFLAPGLM 222
Query: 279 -HQLHV-----------CLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAE 321
H L +P+ + RL+ R F+S +L+ P Q+L +H
Sbjct: 223 WHDLTAKGFARILTVVYAVPTRPGECRLIARFPFQFSSPWPGRLLRLRP--QWL-QHIGN 279
Query: 322 QVLNEDLRLVLGQQERM 338
+ ED +L L QER+
Sbjct: 280 HTVLEDDQLFLHWQERV 296
>gi|389684127|ref|ZP_10175458.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis O6]
gi|388552466|gb|EIM15728.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis O6]
Length = 353
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGLEGRVAAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPTTRVE 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ G+
Sbjct: 181 GNEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGQG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE---QV 323
+ P S + M+ +F P + L + E ++
Sbjct: 241 GYDAPAHSKASSIVVDFITPESDTSIWYFWGMARNFN------PKDEALTANIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FSEDLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|163795088|ref|ZP_02189056.1| oxidase-related protein [alpha proteobacterium BAL199]
gi|159179486|gb|EDP64015.1| oxidase-related protein [alpha proteobacterium BAL199]
Length = 357
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
++ L++ W+ S +L + P EP + R G +++ C HR PL G
Sbjct: 14 DSFLRDIWYFALPSAELGRGALRPKTLLGEPVLFGRDDSGAVFAMRDICPHRGIPLSDGR 73
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 167
++G ++C YHGW ++TDG+C +PS + +++++ P ++ G IW++ +P
Sbjct: 74 FDQGEVECCYHGWRFATDGRCTAIPSLTVDQTMDVDKIRVRTYPVVDRHGAIWVYMPADP 133
Query: 168 PTATIPCLLPPSGFEIHAE-----IVMELP--IEHGLLLDNLLDLAHAPFTHTS 214
+ P + PP E+ M P I+H ++ L+D AH PF HTS
Sbjct: 134 RSTAEPAVSPPVLPEVTNRGPGMVQRMSFPCHIDHAVI--GLMDPAHGPFVHTS 185
>gi|73538170|ref|YP_298537.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72121507|gb|AAZ63693.1| vanillate demethylase subunit A [Ralstonia eutropha JMP134]
Length = 350
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 128/335 (38%), Gaps = 41/335 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ + ++ + P +++R +DG +++ C HR PL +G
Sbjct: 3 VRNTWYVAGWDNEVGASNLFSRTIIGIPVLMYRAEDGTLHALEDRCCHRGAPLSIGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG ++ T G+C + P+ Q +++ LP E+ IWIW GD P A P
Sbjct: 63 DCVRCMYHGLKFDTSGRCIEAPAQQRIPPQARVRVLPVVERNRWIWIWMGD--PEAADPA 120
Query: 175 LLPPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 219
L+P + + + + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTHWLADPAWRSLDGYIHYDVNYLLIADNLLDFSHLPFVHPTTLGGSEAYAAAQPKV 180
Query: 220 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
W++ P K + G W+ Y F P ++L G++ G
Sbjct: 181 ERLDDGVRITRWTLNTEAPPFAKQVKNWPGKVDRWNIY----NFTIPAILLMDSGMAPTG 236
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ R A P + T + +FA P +
Sbjct: 237 TGAPEGQRIDAAEFRGCQALTPETENSTHYFFAHPHNFAI---DNPEVTRSIHQSVVTAF 293
Query: 325 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ED ++ QQ + + +P D ++R
Sbjct: 294 DEDRDIITAQQRSLALAPDFKMVPFSIDAALSQFR 328
>gi|110679615|ref|YP_682622.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109455731|gb|ABG31936.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 33/268 (12%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T ++N W+ A+S+++ DD + F +P ++FR DG +++ C HR PL +G
Sbjct: 2 TTLVRNAWYVAAWSSEI-DDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGK 60
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+QC YHG + TDGKC ++P Q R + + + P E+ G++WIW G EP A
Sbjct: 61 RIGDTVQCGYHGLTFDTDGKCVRVPG-QDRIPPSACVDAYPTEERSGIVWIWMG-EPERA 118
Query: 171 TIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VP 223
+ F +H + + + + +NL+D AH F H +T S VP
Sbjct: 119 NPDDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAHVSFVHETTLGNSASENVP 178
Query: 224 SLVK-------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
V F G D + R PC G +
Sbjct: 179 VHVSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHY-YHLRLPCTAYIDFGSADAT 237
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKT 292
+ ++ R T + LH P + T
Sbjct: 238 RQIAEDDRDSGTRILALHFMTPVTETYT 265
>gi|78045933|ref|YP_362108.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78034363|emb|CAJ22008.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+G V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVIVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 AGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRDGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|425463589|ref|ZP_18842919.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9809]
gi|389831031|emb|CCI26511.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9809]
Length = 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 54/356 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGD--- 165
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 166 EPPTATIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
E +P + S F +I I + I+H ++ L+D AH P+ HTS + +
Sbjct: 125 EIKQENLPPVPIISDFGKLTPKIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWWRSG 182
Query: 221 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
VK + ++P P+ P M +S +KP K+ G +
Sbjct: 183 PRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI------E 224
Query: 281 LHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHFAEQ 322
+ LPS R + R ++ F ++ + + F+ L R+ Q
Sbjct: 225 IVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYLTRQ 284
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 285 FLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|67921279|ref|ZP_00514798.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67857396|gb|EAM52636.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 146/346 (42%), Gaps = 28/346 (8%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L+N W+ DLK MV EP +I R KDG +++ C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHRKMLGEPVLIGRRKDGQVFAMRDICPHRGIPLRYGW 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 162
+ + C YHGW ++T DG C ++PS + +KI + C E +G IW++
Sbjct: 62 MEGEDVCCCYHGWRFNTEDGGCREIPSLTEHDNLDISRIKIPTYACREVQGHIWVYFAED 121
Query: 163 ------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P D PP TIP G + I I+H ++ L+D AH P+ H+S +
Sbjct: 122 SKKEVDPADIPPVPTIPD-FGKIGPGVSETIHFACHIDHAII--GLMDPAHGPYVHSSWW 178
Query: 217 AKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 275
+ VK QG+ PY + + RP ++ + I E + R
Sbjct: 179 WRSGPRKFRVKEKQYEPVSQGFRLVPYDMPVSARPYKILGDNVSIEI--VFELPSVRTEI 236
Query: 276 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDLRLVL 332
+ CL ++ T + + F S+ +P+M + L + L +D +V+
Sbjct: 237 LRGDRYSACLLTT--ITPIDETQCIAFQSIYWTIPWMGVFKPLLSLLTRKFLAQDRDVVI 294
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
QQE + ++ + + +R+ + + A+ PF P+
Sbjct: 295 QQQEGLAYNPSLMLIDDADTQAKWYFRIKYEYQKAIAENRPFKNPI 340
>gi|425441227|ref|ZP_18821508.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9717]
gi|389718122|emb|CCH97874.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9717]
Length = 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|294627570|ref|ZP_06706153.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598201|gb|EFF42355.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 127/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFE 183
Query: 218 -----KGWSVPSLVKFLTP----------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 262
+ V ++ + P G G D + I + F P + +G++
Sbjct: 184 VVHGDRSVIVSRWMRNIEPPPFWASQMALHRGYHGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + + ++A H M R+
Sbjct: 243 TGTGAPEGDRSQGVNAYVLNTVTPETDRTCHYFWAFMRNYA---LHDQSMTTTTRNAIAG 299
Query: 323 VLNEDLRLVLGQQERMN 339
+ ED ++ QQ ++
Sbjct: 300 IFGEDEVVLEAQQRAID 316
>gi|359464344|ref|ZP_09252907.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 481
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 141/340 (41%), Gaps = 30/340 (8%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRA 106
G P ++ W P+A+ DL + F E+ VI+ + V + C HR
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPYQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 107 CPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPST-------QLRNVKIKSLPCFEQEGM 158
PL G + +G ++CPYHGW +S G+C ++P Q R ++SLP ++GM
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 159 IWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHT 213
++++PG A IP L+ P + IV+ +LP + LL+N+LD +H PF H
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEEAPNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFAHH 211
Query: 214 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
+ SV + S QG+ + + + P + T Q
Sbjct: 212 RSVGDR-SVAGPMDLEINHSDRQGFQGIWKTAVGPKKGQFGTQLTTFIAPNLIWHDLTTQ 270
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVLNEDL 328
+ C P + + RL R FAS ++++ P + H + + ED
Sbjct: 271 EKNRTLTVAYCTPIRKGECRLFARFPFQFASPWPAGLIRYTPSWVF---HLLQNSILEDD 327
Query: 329 RLVLGQQER----MNNG---ANVWNLPVGYDKLGVRYRLW 361
++ L QER G A + +P D+ V W
Sbjct: 328 QIFLYLQERHLAQQRQGMPIAQAFYMPTQADRFVVALHQW 367
>gi|440754141|ref|ZP_20933343.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|443657111|ref|ZP_21131830.1| rieske [Microcystis aeruginosa DIANCHI905]
gi|159029863|emb|CAO90917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|440174347|gb|ELP53716.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|443333240|gb|ELS47808.1| rieske [Microcystis aeruginosa DIANCHI905]
Length = 349
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|325048236|emb|CBW54656.1| putative methylase [Streptomyces sp. JS360]
Length = 358
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 35/272 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+S ++ + C ++P V++R DG + + CAHRA PL G
Sbjct: 5 NTWYVAAWSAEVTAKPVRRVIC-KQPIVLYRTPDGGAVALADRCAHRAYPLSEGRTVGDS 63
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG-----DEPPTAT 171
I+C YHG+ Y DG C ++P+ +++S P E++G IW+W G DE
Sbjct: 64 IECGYHGFAYGPDGACTRVPAQSAIPARARVRSYPVVEKDGWIWVWTGERELADESLVPD 123
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------FAKGWSVPSL 225
+ P+ + ++ E H L+ DNLLDL H F H +T + G +V
Sbjct: 124 THWMDDPAWATVTHTVLFEC--RHDLIHDNLLDLTHESFLHRTTVGDDYIYEHGITVEVD 181
Query: 226 VKFLTPASGLQGYWDP--YPIDM------------EFRPPCMVLSTIGISKPGKLEGQNT 271
+ +T + G P Y M EF P + GI+ G+
Sbjct: 182 GRVVTADRLMPGVQAPPLYARTMAAEGLYDRFHATEFHVPSYHVLHSGITGQGR-----P 236
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
R+ + L+ P K T Y S +FA
Sbjct: 237 REEGYLIKVLNGITPVDEKTTWYYYAFSRNFA 268
>gi|393778388|ref|ZP_10366662.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
gi|392714659|gb|EIZ02259.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
Length = 360
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+P+ ++ D+ + + EE V++R +DG +Q+ C HR PL LG +
Sbjct: 4 VRNVWYPLGWAEDIGRE-LSRHMVLEEAIVVYRREDGKIAALQDACPHRLAPLSLGKLKG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHG + GKC ++P ++ N +++ P E+ G+ WIW GD P
Sbjct: 63 DTIECGYHGMTFDCSGKCVRIPGQEIIPGNAVVRAYPIEEKYGLAWIWMGD-------PA 115
Query: 175 LLPPSGFEIHAEI-----------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWS 221
L P+ A+ + + + L DNLLD AH F H ST G +
Sbjct: 116 LADPAKLFHIAQYDDPNWRAVKGGTLRIDCNYLSLCDNLLDPAHVTFVHPSTLGTPAGAT 175
Query: 222 VP 223
VP
Sbjct: 176 VP 177
>gi|425447660|ref|ZP_18827645.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9443]
gi|389731719|emb|CCI04257.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9443]
Length = 349
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|380513012|ref|ZP_09856419.1| vanillate o-demethylase oxygenase subunit protein [Xanthomonas
sacchari NCPPB 4393]
Length = 358
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 125/317 (39%), Gaps = 52/317 (16%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ +A+ ++K ++P V++R +G +++ C HR PL +G +
Sbjct: 11 NAWYAIAWDHEVKH-ALLPRKVCNLDIVLYRTSNGRVAALEDACWHRLVPLSMGRLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG Y +G+C MPS N ++ P E+ +W+WPGD P L+
Sbjct: 70 VVCGYHGLVYDANGRCVHMPSQDTINPSACVRRFPTVERHRYVWVWPGD--AALADPALV 127
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------ 219
P G IH + ++ L+LDNL+DL H F H S+ +
Sbjct: 128 PDLHWNDDPAWAGDGRTIHVKC------DYRLVLDNLMDLTHETFVHGSSIGQDEVAEAP 181
Query: 220 --------------WSV-----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 260
W + P + A G +G D + I + F PC + +G+
Sbjct: 182 FDVVHGERSTVVSRWMLDIDPPPFWAWQIEHAHGYRGKVDRWQI-IRFEAPCTIAIDVGV 240
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
+ G Q R + + L+ P + + + + + H + R
Sbjct: 241 AVAGSGAPQGDRSRGVNGYVLNTITPETDRTCHYFWAFVRNHS---LHEQSITTRLRDGV 297
Query: 321 EQVLNEDLRLVLGQQER 337
V ED LVL Q+R
Sbjct: 298 TGVFGED-ELVLEAQQR 313
>gi|425433924|ref|ZP_18814397.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9432]
gi|389679212|emb|CCH91981.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9432]
Length = 349
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|425450965|ref|ZP_18830788.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 7941]
gi|389767970|emb|CCI06791.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 7941]
Length = 349
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|137442|sp|P12609.1|VANA_PSES9 RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|279997|pir||A43652 vanillate O-demethylase oxygenase (EC 1.14.-.-) Rieske iron-sulfur
component - Pseudomonas sp
gi|151636|gb|AAA26019.1| monoxygenase [Pseudomonas sp.]
Length = 329
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 39/217 (17%)
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 142
E VI+RG +++ C HR PL LGS+ +G++ C YHG DG+ MP+ ++
Sbjct: 5 ERMVIYRGAGQRVAALEDFCPHRGAPLSLGSIQDGKLVCGYHGLVMDCDGRTASMPAQRV 64
Query: 143 RNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHG 196
+ I++ P E+ G IW+WPGD P L+P + + + + ++
Sbjct: 65 QAFPCIRAFPAQERHGFIWVWPGD--AALADPALIPHLEWAENPAWAYGGGLYHIACDYR 122
Query: 197 LLLDNLLDLAHAPFTHTST------------------------FAKGWSVPSLVKFLTPA 232
L++DNL+DL H + H S+ F +G P +
Sbjct: 123 LMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEGDRLITGRFMEGILAPPFWRAALRG 182
Query: 233 SGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
+GL D P+D F PP VL +G++ G+
Sbjct: 183 NGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAGR 216
>gi|422595142|ref|ZP_16669431.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|330985448|gb|EGH83551.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|398868017|ref|ZP_10623445.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
gi|398234911|gb|EJN20768.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
Length = 352
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIASKPLGRQICGEKI-VFYRGHEGRVAAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQDKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTATIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLDMLEQQQKNLLANPERNLLKLNIDAGGVQSR 330
>gi|422641743|ref|ZP_16705165.1| Rieske [2Fe-2S] region [Pseudomonas syringae Cit 7]
gi|440745647|ref|ZP_20924937.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
gi|330954129|gb|EGH54389.1| Rieske [2Fe-2S] region [Pseudomonas syringae Cit 7]
gi|440372280|gb|ELQ09088.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R +D V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQDQQVIAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + R
Sbjct: 236 HAGKGGYHAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADAE---LTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLTHPHRSLLKLNIDAGGVQSR 330
>gi|428771559|ref|YP_007163349.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685838|gb|AFZ55305.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 444
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 47/346 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVNE--G 117
W+P+ DL+ + F + VI++G K + C HR PL G ++E G
Sbjct: 11 WYPIFPLEDLEINKPQSFTLLGQRLVIWKGEKQKKFQVFLDLCPHRLAPLSEGRIDEETG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLR--------NVKIKSLPCFEQEGMIWIWP------ 163
+ C YHGW+++ G C +P + + N +K P E+ ++W+W
Sbjct: 71 NLMCSYHGWQFNEKGICTCIPQAENQELVVKNQHNFAVKVFPTREENDLLWVWADANTPD 130
Query: 164 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 221
++ P P + GF + + +V +L + ++N+ D +H PF H + +
Sbjct: 131 LAEKKPLPLSPQIDKERGF-VWSSMVRDLEYDWQTFIENVADPSHVPFAHHGLQGNRKQA 189
Query: 222 VPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
P ++ + + L + + F PP + IG G+ G T
Sbjct: 190 QPIAIEIVKSSVNLIEAKVSRLFTTTITFEPPSRLEYAIGFGDKGQQLGLIT-------- 241
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 337
C+P K R++ + + +FA L + W H + VL+ D+ ++L QQER
Sbjct: 242 ---YCIPIEPGKCRIVAQFARNFAYSLHKI--TPRWWEHIKTRNAVLDGDM-ILLHQQER 295
Query: 338 M-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 376
N N + +P D+L + +R W D +G +LP+ K
Sbjct: 296 FLQQKLAGENWKNSYKMPTKADRLVIEFRRWFDIYCEG--KLPWEK 339
>gi|422607380|ref|ZP_16679380.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. mori str. 301020]
gi|330891022|gb|EGH23683.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. mori str. 301020]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTTTIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|424776775|ref|ZP_18203751.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
gi|422888068|gb|EKU30460.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
Length = 347
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A +T L ++ P E V++R +DG P ++++C HR PL G +
Sbjct: 3 VRNAWYVGALATQLGR-SLQPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+++C YHG + G C K P R+ ++S PC E+ G++W+W GD P A
Sbjct: 62 DQVECGYHGLTFDCSGSCTKAPGVAQIPRSAVVRSYPCTERFGLVWVWMGD-PELADPSK 120
Query: 175 LLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L+ +E ++ MEL + + DNLLD +H + H S+F
Sbjct: 121 LIDIPEWENPEWGVNRGDAMELDCNYLYVTDNLLDPSHVSWVHQSSFG 168
>gi|237797303|ref|ZP_04585764.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020153|gb|EGI00210.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVTDKPLGRQICNEKMAFYRDQNQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG +DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 QLVCGYHGLVMGSDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDKEKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYEAPQEFKASSIVVDFITPETDTSIWYFWGMARNFNPADES---LTATIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|427707380|ref|YP_007049757.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
gi|427359885|gb|AFY42607.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
Length = 465
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 32/341 (9%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 105
+G + P W+PV + DL + F E V++ K+ ++ C HR
Sbjct: 19 AGGLDPERFDWLEVWYPVHYVADLNKSQLTRFTLLERDLVLWWDKNEQTWRAFEDQCPHR 78
Query: 106 ACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 157
PL G VN +G ++CPYHGW +S GKCE +P + + SLP ++G
Sbjct: 79 LAPLSEGRVNKDGWLECPYHGWAFSGTGKCESIPQQAPGGKAETSPRACVNSLPTTVRQG 138
Query: 158 MIWIWPGDEPPTA-----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+++++PG A + L + + +LP + L++N+LD +H P+TH
Sbjct: 139 LLFVYPGKAENAAKTLVPIVDVLEENTEGWVCLNTFRDLPYDALTLMENVLDSSHIPYTH 198
Query: 213 TSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
T +V P ++ + G +G W P R + PG +
Sbjct: 199 HRTVGNRANVAPVELEIVELGKWGFKGLWQEGP-----RKGTLGKQDTTFIAPGLMWHDL 253
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLNED 327
T + + P + + RL R F+S L + F++ + H + + ED
Sbjct: 254 TSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSNLPGL-FLKLTPRWYSHLGQNGVLED 312
Query: 328 LRLVLGQQER-------MNNGANVWNLPVGYDKLGVRYRLW 361
++ L QER +N + LP D + R W
Sbjct: 313 DQIFLHHQERYLEQKGGTDNFTKAFYLPTKADIFVFQLRSW 353
>gi|257484173|ref|ZP_05638214.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|422678907|ref|ZP_16737181.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|331008254|gb|EGH88311.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERTSTAEQIPVM 351
>gi|289626695|ref|ZP_06459649.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. NCPPB 3681]
gi|289646261|ref|ZP_06477604.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 2250]
gi|422581971|ref|ZP_16657111.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330866818|gb|EGH01527.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
Length = 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTSAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PSLI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|254412665|ref|ZP_05026438.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180400|gb|EDX75391.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 443
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 45/339 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE--G 117
W+P++ DL P VI++ + C HR PL G V+E G
Sbjct: 11 WYPLSPVEDLDPKQPTPVTVLGLRLVIWKPPSSPTYRVFLDQCPHRLAPLSEGRVDEKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQEGMIWIWPGDEPP- 168
+ C YHGW++++ G C +P + N+ +++LPC ++ ++W+W P
Sbjct: 71 NLVCSYHGWQFNSQGICTHIPQAETPQIVTNNQDNICVQTLPCCQENDLLWVWLDANSPE 130
Query: 169 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 221
A P L P GF + + +V +L + L++N+ D +H PF H + +
Sbjct: 131 LAAATPRPLSPQVDASKGF-VWSSMVRDLDYDWQTLVENIADPSHVPFAHHGVQGNRDQA 189
Query: 222 VPSLVKFL-TPASGLQG-YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
P ++ + + A+ ++G + M F PPC + I G+ G T
Sbjct: 190 QPIAIEIVQSTANRIEGNTVGRFNTKMTFEPPCHLEYAISFGDKGQQVGLVT-------- 241
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 337
C+P + K+R++ + +FA L + W H + VL+ D+ ++L QQER
Sbjct: 242 ---YCIPVAPGKSRIVAQFPRNFAKSLSRL--TPRWWNHITVRNLVLDGDM-ILLHQQER 295
Query: 338 -------MNNGANVWNLPVGYDKLGVRYRLWRDALEKGA 369
+ + + L D+ + +R W D +G
Sbjct: 296 FLQQRQSVESWKTAYKLLTSADRFVIEFRKWFDKYCQGT 334
>gi|170690598|ref|ZP_02881765.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
gi|170145033|gb|EDT13194.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
Length = 352
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 126/321 (39%), Gaps = 39/321 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A S+++ D + +EP V++R G + + C HR PL G V +
Sbjct: 4 LLNAWYVAALSSEVTADAPLARTLLDEPVVLYRVAGGQAVALADRCPHRFAPLSRGRVVD 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
G ++CPYHG + +G+C P R + + P E+ G IW WPGD + P
Sbjct: 64 GALECPYHGLRFGAEGRCVFNPHGDGRVPARAEARHYPVRERYGAIWFWPGDPQRASNTP 123
Query: 174 C-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK- 227
L P F +E + + L DNLLDL+H + H T V+
Sbjct: 124 LPAFDYLDPQENFT--SERYLHTHANYQLSADNLLDLSHFQYLHPETLGSEQMASGAVRA 181
Query: 228 ----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
+L P + L G +D+++ PP ++ + I + G
Sbjct: 182 TVAGNTVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVQWIPPGLLTIVVRICESGLP 241
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
E TR+ + H P + + + L A + + +E
Sbjct: 242 E--TTREAVS----AHWLTPETAASSHYFFAFGLPRAIGEHGAELVSRTAQSLLAPFRDE 295
Query: 327 DLRLVLGQQERMNNGANVWNL 347
D+ ++ QQ RM + W+L
Sbjct: 296 DIPMLEAQQ-RMIGDRDFWSL 315
>gi|320108711|ref|YP_004184301.1| Rieske (2Fe-2S) domain-containing protein [Terriglobus saanensis
SP1PR4]
gi|319927232|gb|ADV84307.1| Rieske (2Fe-2S) iron-sulfur domain protein [Terriglobus saanensis
SP1PR4]
Length = 365
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 132/304 (43%), Gaps = 46/304 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
L FW+PVAFS+++ D P+ +E V++R DG ++ C HR PL LG V
Sbjct: 43 LAPFWYPVAFSSEVTDK---PYGARLLDERVVVYRLSDGSLAAAKDICYHRGAPLSLGHV 99
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTA 170
I C YHG Y+ +G+C +P+ + ++ + P E G++W+ E A
Sbjct: 100 EGDEIICKYHGLRYNAEGRCTCIPAHPKGAISPRLRLHTFPVREAFGLVWVRLV-ERGEA 158
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSL 225
+P + PS ++ + V + G ++ LD++H F H TF KG + VP
Sbjct: 159 LLPEMKEWDDPSYLQVLPDSVT-MKASAGRQMEGFLDVSHFAFVHLETFGKGENPEVPDY 217
Query: 226 VKFLTPASGLQGYWDP---YPIDME-FRPPCMV-----------LSTIGISKPGKLEGQN 270
TP + Y+ Y + + PP + + + + PG +GQ
Sbjct: 218 TVEQTPQGFVADYYSTVSNYSVGYKHLNPPGFLWRRRFEVFTPFTAKLTVFFPG--DGQ- 274
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
LH L+V P S +KTRL + +F + P L F QV ED +
Sbjct: 275 -------LHILNVASPVSARKTRLFVPICRNFD---RDAPLQATL--DFNHQVFAEDQAI 322
Query: 331 VLGQ 334
V Q
Sbjct: 323 VEQQ 326
>gi|424072288|ref|ZP_17809709.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|407997942|gb|EKG38371.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
Length = 354
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ + ++ D M C E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTADEVADKPMGRQIC-NEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|71735530|ref|YP_274672.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71556083|gb|AAZ35294.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 354
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHALHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|3915234|sp|O05616.1|VANA_PSEUH RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|1946284|emb|CAA72287.1| a-subunit oxygenase [Pseudomonas sp.]
Length = 354
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E +GK MP +++ IKS E+ G IW+WPGD P L+
Sbjct: 63 KLICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 227
+ + E + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 121 HHLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVE 180
Query: 228 -----------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
F A G D P+D F PP VL +G++ GK
Sbjct: 181 GDTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239
>gi|399010468|ref|ZP_10712841.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
gi|398107191|gb|EJL97198.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
Length = 351
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 133/333 (39%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGLEGRVAALEDFCPHRGAPLSLGYVESG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPTTRVE 180
Query: 219 GWSVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 266
G V + + + P A G D P+D F PP VL +G++ G+
Sbjct: 181 GDEVVTARHMQNIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGQG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
Q + P S + M+ +F + R ++ +E
Sbjct: 241 GYNAPAQSKASSIVVDFITPQSDTSIWYFWGMARNFN---PQDEALTASIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|312960197|ref|ZP_07774708.1| vanillate demethylase A [Pseudomonas fluorescens WH6]
gi|311285419|gb|EFQ63989.1| vanillate demethylase A [Pseudomonas fluorescens WH6]
Length = 346
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 37/333 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAHKPLGRQICGEK-MVFYRGLEGAVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVKF- 228
+ + E + ++ ++ L++DNL+DL H + H S+ + P L
Sbjct: 121 HHLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPLTTVD 180
Query: 229 ---LTPASGLQG-----YW----------DPYPIDM----EFRPPCMVLSTIGISKPGKL 266
+ A ++ +W D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
+ + P + + M+ +F H + R ++ +E
Sbjct: 241 GYHAAPEYKAASIVVDFITPQTDTSIWYFWGMARNFNP---HDEALTASIREGQGKIFSE 297
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|330819552|ref|YP_004348414.1| phenylpropionate dioxygenase [Burkholderia gladioli BSR3]
gi|327371547|gb|AEA62902.1| Phenylpropionate dioxygenase [Burkholderia gladioli BSR3]
Length = 369
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 39 LPRKSLNVSGPVQPYNTRLK-----NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG 93
LP +++ S QP + +FW+P+A+S +LK + +P V+FRG+ G
Sbjct: 6 LPTQNVIDSTATQPVRDLRRVPIHPDFWYPLAWSRELKRGKTLGVQFAGDPIVLFRGESG 65
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSL 150
+++ CAHR PLH G V+ ++C YHGW Y GKC +P +L N +++
Sbjct: 66 TVFALEDRCAHRQVPLHAGVVDGDALRCGYHGWTYDCSGKCVDVPYLGKERLPN-GVRAY 124
Query: 151 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 205
PC E G+I+++ G DE P +P + P + + + +NL+D+
Sbjct: 125 PCREVRGLIFVFTGDPALADEKPVPELPTVADPK--YKTRRFGRAVKCHYSFMHENLMDM 182
Query: 206 AHAPFTHTSTFAK 218
H F H +
Sbjct: 183 NHQ-FLHRREMGQ 194
>gi|67925326|ref|ZP_00518682.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67852825|gb|EAM48228.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 468
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 141/347 (40%), Gaps = 31/347 (8%)
Query: 40 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCV 98
P K+ ++ G P + W+PV + DL F E+ VI+ K+
Sbjct: 13 PEKT-SIIGGSDPDYFDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIWWEEKNNQWSVF 71
Query: 99 QNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSL 150
++ C HR PL G +NE G ++CPYHGW +S G CE +P + + +K+L
Sbjct: 72 EDQCPHRLAPLSEGRINESGCLECPYHGWAFSGQGNCEIIPQQHPTGKAEKSLRASVKTL 131
Query: 151 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 205
P ++G+++++ G + P + L S + +LP + L++N+LD
Sbjct: 132 PTQVRQGLLFVYAGKPENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYDALTLMENVLDS 191
Query: 206 AHAPFTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
+H P+TH + +V P ++ + G +G W+ P R + P
Sbjct: 192 SHIPYTHHKSVGNRANVSPVELEVIESGKWGFKGVWEEGP-----RKGTLGRQETNFVAP 246
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAE 321
+ T + + P + K RL R F+S + + + H +
Sbjct: 247 AMMYHDLTSKQFGRTLTVVYATPIGKGKCRLFARFPFKFSSKIPKFFIKLTPRWYSHIGQ 306
Query: 322 QVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
+ ED ++ L QER + A + LP D + +W
Sbjct: 307 NGVLEDDQIFLHHQERYLEQKGGSSKFAKAFYLPTKADLFVFQLHIW 353
>gi|299533883|ref|ZP_07047249.1| Rieske (2Fe-2S) protein [Comamonas testosteroni S44]
gi|298718110|gb|EFI59101.1| Rieske (2Fe-2S) protein [Comamonas testosteroni S44]
Length = 346
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ + ++ D + E +RG G+ V++ C HR PL LG V E
Sbjct: 3 LLNTWYVACKADEIPQDKPLGRTICNERMAFYRGPQGV-AAVEDFCPHRGAPLSLGFVCE 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG--DEPPTATIP 173
G++ C YHG E +GK MP ++R +I+S P E+ G +W+WPG +E IP
Sbjct: 62 GKLICGYHGLEMGCEGKTIAMPGQRVRGFPEIRSFPVVERYGFVWVWPGRKEEADPGLIP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVKF-- 228
L + + + H L++DNL+DL H + H S+ + P K
Sbjct: 122 ELHWADNPQWAYGGGYYHIKASHLLMIDNLMDLTHETYVHASSIGQKEIDETPCTTKVEG 181
Query: 229 --LTPASGLQG------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 264
+T + ++G +W D P+D F PP V+ +G++ G
Sbjct: 182 DHVTTSRFMEGLPEAPPFWRMALRGNGLPDDQPVDRWQICHFEPPSHVMIEVGVALAG 239
>gi|427731793|ref|YP_007078030.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427367712|gb|AFY50433.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 340
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ +FW+ V S LK +T++ E IFRG+DG P +++ C HR+ L G+V
Sbjct: 2 QFADFWYIVTLSEQLKSNTVLARSLLGEWLAIFRGEDGQPVALRDRCLHRSSRLSAGNVC 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+G +QCPYHGW Y +GK +P+ + + + K+ EQ+G +++ + P
Sbjct: 62 QGALQCPYHGWVYDRNGKVIAVPAEGVDFQPSQQRQAKAYATKEQDGYVYVRLAENPSVD 121
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P +P +G+E ++ +N +D+ H F H F
Sbjct: 122 FAPFSMPHYGEAGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVF 169
>gi|341614839|ref|ZP_08701708.1| vanillate monooxygenase [Citromicrobium sp. JLT1363]
Length = 329
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 129/316 (40%), Gaps = 42/316 (13%)
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 142
EP ++ R +DG + + C HR PL LG + CPYHG + T GKC + P +
Sbjct: 20 EPVLLMRKEDGTAVAMVDRCPHRYAPLSLGEREGDCVTCPYHGLTFDTSGKCVRNPFSDK 79
Query: 143 --RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF--EIHAEIVMELPIE--HG 196
+++ P E++ ++W WPGD P A + S + HA I +P++ +
Sbjct: 80 IPAGASLRTFPVVERDHIVWFWPGD-PARADEDAIPDFSAIVRDGHAPITGLMPMDANYE 138
Query: 197 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQ-----------------GYW 239
DNL+DL+H F H +FA G V + G Q G +
Sbjct: 139 YGTDNLMDLSHIEFVHKGSFA-GRGVIFAGEHEVKVEGEQLHSNWWMPGIPAPAHTFGIY 197
Query: 240 DPYPI-----DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRL 294
DP I DM + P + +G G GQ R+ HQ H+ P + +
Sbjct: 198 DPEMITDHWLDMRWDAPASMYLQVGACPEG---GQ--REEGVIAHQAHILTPETETTSHY 252
Query: 295 LYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN---LPVGY 351
+ + A ++ + L Q E+ + ++ +GA W+ + +G
Sbjct: 253 FWATTRHGAPSVEGDAMLAGL----MGQAFGEEDKPIIEAAYANTDGAGFWDRKPVSLGI 308
Query: 352 DKLGVRYRLWRDALEK 367
D G R R + L+K
Sbjct: 309 DTGGTRARRMIEKLKK 324
>gi|416016890|ref|ZP_11564127.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|416026994|ref|ZP_11570325.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|416028121|ref|ZP_11571221.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320324098|gb|EFW80180.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|320327819|gb|EFW83826.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320328655|gb|EFW84655.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 354
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|84687663|ref|ZP_01015537.1| putative dioxygenase [Maritimibacter alkaliphilus HTCC2654]
gi|84664340|gb|EAQ10830.1| putative dioxygenase [Rhodobacterales bacterium HTCC2654]
Length = 441
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 100
++L GP ++ +W P S+DL KD +E ++FR +G G V +
Sbjct: 8 ETLVRVGPGTTMGDMMRLYWLPFMASSDLEKDGQPQTVKLLDETLIVFRDSEGRVGLVDH 67
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQ 155
C HR PL G + ++C YHGW++ DG MP+ R+ VKIKS PC E+
Sbjct: 68 ICPHRGAPLVFGRNEDCGLRCVYHGWKFDVDGNVADMPAEPPRSRLKDRVKIKSYPCVER 127
Query: 156 EGMIWIWPGDEPPTATIPCLLPPSGFEIH----AEIVMELPIEHGLLLDNL---LDLAHA 208
G++W + GDEP + P L PS FE + +V+ ++ L L +D AHA
Sbjct: 128 GGVVWTYMGDEPDESR-PAL--PS-FEWNMVPEENVVVTFRVQECNWLQALEGEIDSAHA 183
Query: 209 PFTH 212
P H
Sbjct: 184 PILH 187
>gi|166367445|ref|YP_001659718.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa NIES-843]
gi|166089818|dbj|BAG04526.1| rieske 2Fe-2S family protein [Microcystis aeruginosa NIES-843]
Length = 349
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 155/359 (43%), Gaps = 60/359 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 166
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 167 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP TI L P ++ I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KVAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 277
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGSKVSI---- 223
Query: 278 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 319
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|434388645|ref|YP_007099256.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019635|gb|AFY95729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 462
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 141/339 (41%), Gaps = 53/339 (15%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNE-GR 118
W+PV + DL T PF + VI+ + C HR L G + E G
Sbjct: 26 WYPVFYIEDLDKLTPTPFTLLDRDLVIWWDTQASQWRAFDDRCPHRLARLSEGRIAEDGL 85
Query: 119 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG-----DE 166
++CPYHGW ++ +G C+++P + R +KSLP ++G+++I+ G ++
Sbjct: 86 LECPYHGWAFTGNGTCDRIPQQLPDAKAETSRRACVKSLPTAVEQGLLFIYAGTPARAEQ 145
Query: 167 PPTATIPCLL----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
P IP + P G+ + +LP + LL+N+LD +H P+TH + K S
Sbjct: 146 TPIPLIPVPMVDGKPTDGWLV-LNTFRDLPYDALTLLENVLDPSHLPYTHHGSVGKR-SN 203
Query: 223 PSLVKFLTPAS---GLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
S V+ +S G G W P + F PC++ + ++
Sbjct: 204 ASPVELEVTSSDKLGFTGTWADGPRKGTLGRQNTTFIAPCLMWHEL-----------TSK 252
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLNEDLR 329
Q + ++ P + + R+ R FAS + F++ + H + ED +
Sbjct: 253 QFGETITVVYAT-PKRKGECRIFARFPFKFASKVPEF-FIKATPEWYSHINNNAILEDDQ 310
Query: 330 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
+ L QER N + + LP D YR W
Sbjct: 311 IFLHHQERYLEQSGGSTNFSQSFYLPTKADAFVFEYRQW 349
>gi|83944091|ref|ZP_00956547.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
gi|83844958|gb|EAP82839.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
Length = 355
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 109/267 (40%), Gaps = 37/267 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ +STD D+ +VP + V +R DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDE-LVPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTA 170
IQC YHG + DG C ++P S ++ + S P E+ G+++IW GD +P A
Sbjct: 63 DTIQCGYHGMTFGADGACVRVPGQSNLPKSAYVDSYPVLERHGIVFIWMGDADKADPALA 122
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK- 227
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 123 FDMPELGQEGWHVHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVKT 182
Query: 228 ------------------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
F G G W Y + M P + G S KL
Sbjct: 183 ADEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHYYYLHM----PSTAVIDFG-SSDAKL 237
Query: 267 E-GQNTRQCATHLHQLHVCLPSSRKKT 292
E ++ R + LH P + T
Sbjct: 238 ELPEDQRNKGVRIFALHFVTPVTEDYT 264
>gi|423095397|ref|ZP_17083193.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q2-87]
gi|397888921|gb|EJL05404.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q2-87]
Length = 361
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 130/338 (38%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAAKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK MP ++R KS E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGADGKTVDMPGQRVRGFPCNKSFAVQERHGFIWVWPGDQ--ALADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P + + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HPLEWAENEEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ + G +W D P+D F PP VL +G++
Sbjct: 176 ETTVNGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G Q + P + + M+ F + R
Sbjct: 236 HAGHGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQP---QDEALTATIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|383773856|ref|YP_005452922.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
gi|381361980|dbj|BAL78810.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
Length = 349
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 139/349 (39%), Gaps = 49/349 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKP-ALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +Y++ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 67 VVCGYHGLKYNSQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 124
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------- 217
P G IH ++ L+LDNL+DL H F H S+
Sbjct: 125 PDMHWNHDPAWAGDGKTIHVN------CDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAP 178
Query: 218 -------KGWSVPSLVKFLTP------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
K +V ++ + P G G D + I + F PC + +G++ G
Sbjct: 179 FDVTHGEKTVTVTRWMRGIEPPPFWAKQLGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTG 237
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ R + L+ P + K + ++ + + R +
Sbjct: 238 TGAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYRIGEQRITTEI---REGVSGIF 294
Query: 325 NEDLRLVLGQQERMNNGAN--VWNLPVGYDKLGVRYRLWRDALEKGAKQ 371
ED ++ QQ M+ + +NL + + R + R ++ A Q
Sbjct: 295 REDELILEAQQRAMDENPDRIFYNLNIDAGAMWSRKLIDRMVAKESAPQ 343
>gi|332708372|ref|ZP_08428350.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332352865|gb|EGJ32427.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 478
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 41/350 (11%)
Query: 42 KSLNVSGPVQPYNTRL---KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGC 97
K L + G YN+ + W+PV + DL F E+ V++ K + +
Sbjct: 17 KKLGLGG----YNSDFFDWEEVWYPVFYVEDLDKSQPTRFTLLEQDIVLWWDKHEQMWRA 72
Query: 98 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKS 149
+ C HR PL G +N+ GR++CPYHGW +S G+CE +P + R + S
Sbjct: 73 FVDQCPHRLAPLSEGRINQDGRLECPYHGWAFSGTGQCEVIPQQKERGKAEISQRACVNS 132
Query: 150 LPCFEQEGMIWIWPG--DEPPTATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLL 203
LP +G+++++PG + +P + P G+ + +LP + L++N+L
Sbjct: 133 LPTKIAQGLLFVYPGLAENAAKTKVPIVDALEEDPDGW-VCLNTFRDLPYDALTLMENVL 191
Query: 204 DLAHAPFTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
D +H P+TH + +V L + G +G W P R +
Sbjct: 192 DPSHIPYTHHRSVGNRANVSPVELEVVESGKCGFKGVWAEGP-----RKGTLGRQDTTFI 246
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRH 318
PG + T + + P + + RL R F+S L + F++ + H
Sbjct: 247 APGLMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSKLPRL-FLKLTPRWYSH 305
Query: 319 FAEQVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
+ + ED ++ L QER N + LP D + R W
Sbjct: 306 IGQNNVLEDDQIFLHYQERYIEQQGGSGNFNKAFYLPTKADLFVFQLRFW 355
>gi|116075488|ref|ZP_01472748.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
gi|116067685|gb|EAU73439.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
Length = 436
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 44/306 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVNE-GR 118
W+PVA+ DL F E VI+ + + C HR PL G +NE G
Sbjct: 9 WWPVAYVRDLDQSKPTRFTLLERDLVIWWDPSAALWRAFPDVCPHRLVPLSEGRINERGE 68
Query: 119 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
++CPYHGW + +G+C+ +P S LR+ + SLP +G++++W G P A
Sbjct: 69 LECPYHGWSFDGEGRCQHIPQAEEGTRSDSLRS-RCDSLPSATAQGLLFVWTG--APEAA 125
Query: 172 IPCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
P LP P + + + +LP++ LL+N+LD++H PFTH T + +
Sbjct: 126 DPDSLPLVPQLQDNPESWTVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGRRSNAA 184
Query: 224 SLVKFLT--PASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
+ +T G W+ P FR P ++ L+ + +
Sbjct: 185 PVRAEITREDRGGFSAVWEEGPRRGSLGSQFTTFRAPQLMWH--------DLDAKGFARI 236
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNEDLRLVL 332
T ++ +P R + RL R F S + ++ W +H + ED ++ L
Sbjct: 237 LTVVY----AVPIRRGECRLFARFPFQFRSPAPRLLLGLRPRWLQHIGNHKVLEDDQVFL 292
Query: 333 GQQERM 338
QER+
Sbjct: 293 HWQERL 298
>gi|395652321|ref|ZP_10440171.1| oxidoreductase subunit alpha [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 237
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEK-MVFYRGHEGAVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
R+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ + P L+
Sbjct: 63 RLVCGYHGLVMGGDGKTVDMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--SLADPALI 120
Query: 177 PPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ + E + ++ ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|299770978|ref|YP_003733004.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
gi|298701066|gb|ADI91631.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
Length = 358
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGK MP+ ++ KS E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKSYAVVEKFGFIWIWPGEKALADETK-- 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + HAE + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHAEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|126654793|ref|ZP_01726327.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
gi|126623528|gb|EAZ94232.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
Length = 443
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 45/338 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNEG-- 117
W+P+ D+ ++ P VI++ + V + C HR PL G ++E
Sbjct: 11 WYPLIPIEDIDSNSPTPVTLLGLRLVIWKPRSSTYYQVFLDQCPHRLAPLSEGRIDENSD 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------SLPCFEQEGMIWIWP------ 163
+ C YHGWE+ +G C +P T+ + K S P + G++W+WP
Sbjct: 71 NLMCSYHGWEFDQNGICTSIPQTENTKILTKNKQQFACVSFPSRQINGLLWVWPDKNSQD 130
Query: 164 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 219
++ P P + GF I + V ++ + L++N+ D +H P+ H G
Sbjct: 131 LANKTPLPLSPQIDADKGF-IWSSYVRDMAYDWQTLVENVADPSHVPYAHHGVQGNRNNG 189
Query: 220 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 279
+P + TP + F PPC + I I G + +Q ++
Sbjct: 190 QPIPIEIVKSTPNVIEAKIERALNSTITFEPPCRLEYAIKI-------GDSNKQVGLVVY 242
Query: 280 QLHVCLPSSRKKTRLLYRMSLDFA-SVLKHVPFMQYLWRHFAEQ--VLNEDLRLV----- 331
C+P + K+RL+ + +FA S++K +P W H + VL D+ L+
Sbjct: 243 ----CVPVAPGKSRLVGQFPRNFAKSLMKIIP---RWWEHLTTRHLVLEGDMILLQQQEY 295
Query: 332 -LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
L +++ + + LP D+L + +R W D +G
Sbjct: 296 YLQEKQETQSWKTAYQLPTEADRLVIEFRRWFDTYCQG 333
>gi|325916823|ref|ZP_08179074.1| vanillate demethylase subunit A [Xanthomonas vesicatoria ATCC
35937]
gi|325536974|gb|EGD08719.1| vanillate demethylase subunit A [Xanthomonas vesicatoria ATCC
35937]
Length = 387
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 40 NAWYAVAWDHEIKH-ALTPRKVCNLEVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 98
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS + N ++S P E+ +WIWPGD + TA IP
Sbjct: 99 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRSFPVAEKHRYVWIWPGDPAKADTALIPD 158
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G I+A+ ++ L+LDNL+DL H F H S+ +
Sbjct: 159 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 203
>gi|425453334|ref|ZP_18833092.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9807]
gi|389799951|emb|CCI20569.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9807]
Length = 349
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 54/356 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 117 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 169
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ +
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFISADSKR 124
Query: 170 ATIPCLLPP----SGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
LPP S F +I I + I+H ++ L+D AH P+ HTS + +
Sbjct: 125 EINQENLPPVPTISDFGKLTPKIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWWRSG 182
Query: 221 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
VK + ++P P+ P M +S +KP K+ G +
Sbjct: 183 PRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI------E 224
Query: 281 LHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHFAEQ 322
+ LPS R + R ++ F ++ + + F+ L R+ Q
Sbjct: 225 IVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYLTLQ 284
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 285 FLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|445425152|ref|ZP_21437231.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
gi|444753805|gb|ELW78443.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
Length = 358
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ + D++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACYPEDIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG +GK MP+ ++ K+ E+ G IW+WPGD+
Sbjct: 62 GNLVCGYHGLVMGCEGKTISMPAQRVNGFPCNKAYAAIEKFGFIWVWPGDQ--ALADESK 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|254414106|ref|ZP_05027874.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179242|gb|EDX74238.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 357
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
LKNFW+ FS+ + T P + +V++R DG +++ C HR L LG V
Sbjct: 2 LKNFWYVCEFSSAV---TQKPKQILMLNQRFVLYRNSDGQVVALKDQCPHRGAALSLGWV 58
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD---- 165
+G ++CPYHGW++ DGKC +P+ + ++ S E+ G++W++ GD
Sbjct: 59 EDGCLRCPYHGWKFQADGKCIDIPANAPEIPIPKKARVDSYLVQEKYGLVWLFYGDLPPE 118
Query: 166 -EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP +P P I A++ ++ + +++N LDLAH H ++ G
Sbjct: 119 KRPPIPYLPEFTDPKMRSIVADV--KVNNHYTRVIENALDLAHVYIVHGNSVGAG 171
>gi|148554460|ref|YP_001262042.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499650|gb|ABQ67904.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 423
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 34/322 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVN 115
L+N W+ A + +++ D + EP ++FR + G P + + C HR PL G
Sbjct: 84 LRNAWYVAALAGEVEADLLRRL-ILGEPVLLFRDEQSGAPSALHDLCPHRFAPLSRGKRV 142
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPG--DEPPTA 170
+G IQC YHG ++ GKC P R +++ P E+ GMIWIW G D +
Sbjct: 143 DGGIQCGYHGLVFAPSGKCVLNPHGNGRILPTAAVRAFPVIERHGMIWIWMGEHDLADPS 202
Query: 171 TIPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAKGWS---VPSL 225
IP + LP + LL DN+LD +HA + H + G + P +
Sbjct: 203 RIPDFSYLDAADQRTRGAGYLPTRANYQLLTDNILDASHADYLHALLDSDGGTRHEAPRV 262
Query: 226 VKFLTPASGLQGYWDPYP----IDMEFRPPCMVLSTIGIS--KPGKL--------EGQNT 271
+ + + W P + + P V + + + P + EG+
Sbjct: 263 QELGDGSVEVSWTWGPASPMKFLSHMYAPGAEVHTRLAVRWHAPSAMHLRISSAAEGEEL 322
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYR--MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 329
Q +H+ P + ++T Y S D A+ F++ R FA +ED
Sbjct: 323 DQ-GLQAEAMHIMTPETARQTHYFYGGVRSFDVANDAYTAAFLEGARRAFA----DEDKP 377
Query: 330 LVLGQQERMNNGANVWNL-PVG 350
++ Q M + +++ + P+G
Sbjct: 378 MIEAVQANMGDETDIFAMRPLG 399
>gi|378950713|ref|YP_005208201.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas fluorescens F113]
gi|359760727|gb|AEV62806.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas fluorescens F113]
Length = 361
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 131/338 (38%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVQERHGFIWVWPGDQ--ALADPALI 120
Query: 177 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
S + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAESDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G Q + P + + M+ F + R
Sbjct: 236 HAGNGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQP---QDEALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|428169222|gb|EKX38158.1| hypothetical protein GUITHDRAFT_50255, partial [Guillardia theta
CCMP2712]
Length = 366
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 51/296 (17%)
Query: 61 WFPVAFSTDLKDDT---MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE- 116
W+PV+ + DLK D +V W + G C + C HR PL G +++
Sbjct: 5 WYPVSPAKDLKKDQPNQVVLLGLDLVVW--WHQPSGTWSCFADECPHRLAPLSEGRIDKN 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQ-EGMIWIWPGDEPPTA----- 170
G +QC YHGWE+S G CE++P + +K C G++WI+P + A
Sbjct: 63 GNLQCAYHGWEFSEKGSCERIPQDSMDTMKCDKKACATSYPGLLWIFPDTDRNLAMSKSP 122
Query: 171 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKF 228
IP P+ + + ++P L++NL+D +H PF H A+ P +
Sbjct: 123 KIIPQFDDPAFVDPTNFFMRDVPYGWDTLIENLVDPSHVPFAHHGLIEARDQGRPINLYV 182
Query: 229 LTPASGLQGYWDPYPIDME--------------FRPPCMVLSTIGISKPGKLEGQNTRQC 274
+ +G +GY DM+ FRPPC+ IS P K
Sbjct: 183 ESHEAGFEGY------DMDQNSTSRRCGIVSSKFRPPCL------ISDPEK--------N 222
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAE-QVLNED 327
+T L C+P++ +RL+ R F + ++ ++ MQ W H ++ QV++ D
Sbjct: 223 STFLGLGTYCIPTAPGHSRLITRFPFRFPNQIVANIVRMQPRWMTHLSQNQVIDSD 278
>gi|148553989|ref|YP_001261571.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499179|gb|ABQ67433.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 359
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ VA ++ +V ++RG G+ + + C HR PL LG+V
Sbjct: 3 LFNAWYIVAEPDEVAGGGIVARTLLGRRVAVYRGASGVLVGLDDFCPHRLAPLSLGTVVG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHG E+ DG C ++P + ++++ P E+ G IWIW GD A
Sbjct: 63 DGIRCAYHGAEFGADGICVRVPGQKAVPPRARVRTYPVVERHGYIWIWMGDPAGAADESS 122
Query: 175 LLPPSGFEIHAE--------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+ P GF + + + + ++ L+ DNL D+ HA F H +F
Sbjct: 123 I--PEGFWVSGDPAWIGGYGHIESIRSDYRLINDNLFDITHAEFVHPESFG 171
>gi|402702325|ref|ZP_10850304.1| oxidoreductase subunit alpha [Pseudomonas fragi A22]
Length = 352
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 138/341 (40%), Gaps = 53/341 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +R ++ V++ C HR PL LG V+ G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKI-VFYRAQENRVAAVEDFCPHRGAPLSLGYVDNG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAAVERYGFIWVWPGDQ--DLADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEVAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D +D F PP VL +G++
Sbjct: 176 TTTVEGHEVVTARHMENIMPPPFWRMALRGNNLADDVLVDRWQICRFSPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F P Q L E
Sbjct: 236 HAGKGGYHAAPEFKASSIVVDFITPETETSIWYFWGMARNFN------PQDQALTDTIRE 289
Query: 322 ---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
Q+ +EDL ++ QQ+ + + + L + D GV+ R
Sbjct: 290 GQGQIFSEDLEMLERQQQNLLDHPHRALLKLNIDSGGVQSR 330
>gi|428777231|ref|YP_007169018.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691510|gb|AFZ44804.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 340
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA S+++ D +++P V++R DG +++ C HR L G + R
Sbjct: 13 NHWYVVARSSEVTTDPYA-VTLWKQPIVLYRQSDGQVCALEDRCPHRFVRLSEGKLQRDR 71
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHGW+++ +GKC +P +L +++ P E +G IW++ GDE TAT+P
Sbjct: 72 VECAYHGWQFNAEGKCVSIPYLTEKQKLPPCQLRVYPVQEGDGFIWVFLGDE--TATVPR 129
Query: 175 LLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P I V+E + L++NL+D+ H H + W+ L
Sbjct: 130 FQVPEWDHLNYIATVSVIETQAHYSYLIENLMDMYHG---HLHEDWQAWTDAKLENIEED 186
Query: 232 ASGLQGYWDP---YPID 245
S + GY++ Y ID
Sbjct: 187 DSQVHGYYNAQSYYRID 203
>gi|377807933|ref|YP_004979125.1| vanillate monooxygenase [Burkholderia sp. YI23]
gi|357939130|gb|AET92687.1| vanillate monooxygenase [Burkholderia sp. YI23]
Length = 349
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+S ++ D++ + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNIWYAAAWSHEI-DESFATRELLGEPMLLYRKHDGTPVAMIDRCPHRFAPLSMGKRVG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHG + G C P R ++++ P + G++W+WPGD P A I
Sbjct: 63 DSVECGYHGLRFDCSGACTLNPHGDGRIPQAARVRTFPVVDLHGLVWLWPGD-PARADI- 120
Query: 174 CLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHT--------------- 213
L+P G + + M + L++DNL+DL+H + H
Sbjct: 121 GLIPDCGHLVSPRLKTIGDQMIHQAHYELVVDNLMDLSHVNYVHAPYQQVDDFLRAKHDV 180
Query: 214 ----STFAKGWSVP------SLVKFLTPASGLQGYWDPYPIDMEFRPP-CMVLSTIGISK 262
+T +VP S FL YW +++ + P C VL T G+
Sbjct: 181 VQTGATLESRRTVPSTRAPQSFRPFLADPDAPVEYW----LNIRWHAPGCCVLET-GVVP 235
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
G+ + THL P + TR +Y S ++
Sbjct: 236 IGEPRENGLVRIGTHL-----VTPITASSTRYVYASSRNY 270
>gi|289767753|ref|ZP_06527131.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
gi|289697952|gb|EFD65381.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
Length = 356
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 46/339 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + ++ EP V++R + DG P + + C HR PL +
Sbjct: 6 RNQWYVAAYSHEVGRE-LLGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRL 64
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ RI C YHG+ Y T G C +P + R ++ S P E++ ++W+W GD P
Sbjct: 65 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVAERDSLVWVWIGD--PALAD 122
Query: 173 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 212
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 123 PEAVPRARHLDAPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAET 179
Query: 213 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
T+ +G + + + F ++G+ G D + D+E+ PC+ + ++
Sbjct: 180 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQ-DIEYHAPCLYVLHSRVA 238
Query: 262 KPGKLEGQNTRQ-CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
G L + H + PS K + +S D+A+ ++L++
Sbjct: 239 PTGTLPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWAT--DDAEVTEFLYKSNR 296
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V+ + L L Q+ A L + D G+ R
Sbjct: 297 TVVMQDVDALNLLQRTLGGERAGYQELSINIDTGGLAAR 335
>gi|90415583|ref|ZP_01223517.1| Rieske (2Fe-2S) region protein [gamma proteobacterium HTCC2207]
gi|90332906|gb|EAS48076.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2207]
Length = 354
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+ A S ++ D + EP V+FR +DG G +++ C HRA PL LG+V+E
Sbjct: 21 DMWYVAALSAEVSDKPLAR-TLLNEPVVLFRTQDGQIGALEDRCCHRALPLSLGTVDESG 79
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHG ++ G C ++P + K+ + E+ +IWIW G E + P
Sbjct: 80 LRCGYHGLLFNCAGACIEIPGQEKIPSKAKVTAYHAIEKGPLIWIWFGSELDSE--PSCE 137
Query: 177 PPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PP + +H + V + L+ DNLLDL+H + H +T
Sbjct: 138 PPE-YSVHTDKRYLFDGDVYHYEAPYQLIHDNLLDLSHLGYVHANTIG 184
>gi|148240601|ref|YP_001225988.1| putative dioxygenase [Synechococcus sp. WH 7803]
gi|147849140|emb|CAK24691.1| Putative dioxygenase [Synechococcus sp. WH 7803]
Length = 349
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+L W+ V S+ + ++ D + + I+R DG V + C H+ L G V
Sbjct: 2 QLTRSWYVVEHSSAVPAGSVRRLDFHGQAFAIWRALDGTLSVVSDRCPHKGASLSAGRVG 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIW-------- 162
E + CPYHGW + +DG C K+P+ R + SLPC E G IWIW
Sbjct: 62 EEGLACPYHGWCFQSDGHCAKIPAQDSAQAIPRRAQAFSLPCRESVGFIWIWWDPSAESS 121
Query: 163 PGDEPPTATIPCLLPPSGFEIHAEIVMELPIE---HGL-LLDNLLDLAHAPFTHTSTFA 217
D PP +P + P + +E +E H L +L+ +DL HAPF H+ +F
Sbjct: 122 AEDLPP---LPTVGPVPEDDDRGWRALEGSVEWNAHWLRVLEAFMDLTHAPFVHSGSFG 177
>gi|388565620|ref|ZP_10152105.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
gi|388267188|gb|EIK92693.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
Length = 366
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + C + V++R DG +++ C HR PL LG +
Sbjct: 11 NAWYAAAYDVEVGRSLLARTVC-NQKLVLYRQTDGRLAALEDACWHRLLPLSLGRLEGDE 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG Y+ +G+C MPS + N ++ P E+ +WIWPGD P L+
Sbjct: 70 VVCGYHGLVYNAEGRCTHMPSQETINPAACVRRFPVAEKHRFVWIWPGD--PALADEALI 127
Query: 177 PPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + E ++ + ++ L++DNL+DL H F H S+ G
Sbjct: 128 PDLHWNHDPEWAGDGKMIRVKCDYRLVVDNLMDLTHETFVHGSSIGNRAVAEAPFVATHG 187
Query: 220 WSVPSLVKFLT-------------PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
++ +++ A G G D + I + F PC V +G++ G
Sbjct: 188 ERTATVTRWMENIEAPPFWAGQIRQARGYTGPVDRWQI-IRFEAPCTVAIDVGVAPTG 244
>gi|365885381|ref|ZP_09424384.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
gi|365285960|emb|CCD96915.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
Length = 347
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 130/329 (39%), Gaps = 37/329 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K M C + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQALMPRTICGKHV-VMYRKADGTIAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 220 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPAGTGAPEG 243
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + L+ P + K + + ++ L + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDELI 300
Query: 331 VLGQQERM--NNGANVWNLPVGYDKLGVR 357
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|220919762|ref|YP_002495065.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219952182|gb|ACL62573.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 448
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT-MVPFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ SGP P T ++ +W P A +L+ + +VP E +V+FR + G G + C
Sbjct: 10 ITRSGPGTPLGTLMRRYWQPAALVDELQGERPVVPVQLLGEKFVLFRDEAGRYGLLDRDC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEG 157
HR L G + G ++C +HGW + +G+C + P+ + RN++ ++ P E+ G
Sbjct: 70 PHRGADLAFGRLEHGGLRCAFHGWLFDVEGRCLETPAEPVGSKLCRNIRQRAYPVVERSG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+++ + G+ P A + C L P+ + + + E L + +D AHA F H
Sbjct: 130 ILFAYLGEGEPPAFPELDCFLAPNAYTFAFKGLFECNWLQALEVG--IDPAHASFLH 184
>gi|66045944|ref|YP_235785.1| Rieske (2Fe-2S) protein [Pseudomonas syringae pv. syringae B728a]
gi|422672408|ref|ZP_16731772.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256651|gb|AAY37747.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae B728a]
gi|330970146|gb|EGH70212.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 354
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|148557165|ref|YP_001264747.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502355|gb|ABQ70609.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 351
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 55/283 (19%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ ++ D + EE V FRGKDG+ + + C HR PL LGSV +
Sbjct: 10 LRNAWYMFAWGEEVADAPLGRTIAGEE-LVCFRGKDGLV-VLADRCPHRFVPLSLGSVAD 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G ++C YHG + +DG+C P ++S P E++ +IW+W GD P L
Sbjct: 68 GVLECAYHGLRFGSDGRCMFNPLGDPPERAVVRSYPVVERDRVIWVWTGD-------PAL 120
Query: 176 LPPSGFEIHAEIV----------MELPIEHGLLLDNLLDLAHAPFTH------------- 212
P G + + + ++ L +DNL DL H F H
Sbjct: 121 ADPDGIADFSFLADPARATVTGYAHVRADYQLAIDNLSDLTHVQFVHRDYQASEAYHRLV 180
Query: 213 ------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 260
+ TF G P L FL P + + ++ + P + + +
Sbjct: 181 DDTWQDGDVVHRSITFPNGRPAPFLQSFLGPDKLID-----FTMETRWTLPSNIKLSATV 235
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
++PG + Q H H+ P + Y S D+
Sbjct: 236 TEPGAPD-----QYLIGNHSAHLVTPEADGSCHYFYAHSRDYG 273
>gi|422631632|ref|ZP_16696815.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. pisi str. 1704B]
gi|424067650|ref|ZP_17805106.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
gi|330941461|gb|EGH44272.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. pisi str. 1704B]
gi|408000219|gb|EKG40581.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
Length = 354
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|395499683|ref|ZP_10431262.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. PAMC
25886]
Length = 333
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
N W+PVA S L++ P C P V+FR + G + + C HR PL G V +
Sbjct: 5 NAWWPVALSHQLRN---APLACQLLGLPLVLFRDEGGRAAVLPDRCPHRFAPLSAGKVRD 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDE----PPT 169
G+I+CPYHGW ++ DG+C ++P T+ + S+ E G++W+ PG E PP
Sbjct: 62 GQIECPYHGWRFAADGRCTRVPGTEQAACNKPLLDSVQSCEAHGLVWVSPGPERPQTPPV 121
Query: 170 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
A P F I ++ L +N LD H F H
Sbjct: 122 APAPQQQNLDTFWITDQVQCSLQDA----AENFLDGFHTHFVHAG 162
>gi|330809832|ref|YP_004354294.1| Vanillate monooxygenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697481|ref|ZP_17671971.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q8r1-96]
gi|327377940|gb|AEA69290.1| Vanillate monooxygenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004151|gb|EIK65478.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q8r1-96]
Length = 361
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 130/338 (38%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGHVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVQERHGFIWVWPGDQ--ALADPALI 120
Query: 177 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
S + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAESDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ + G +W D P+D F PP VL +G++
Sbjct: 176 VTTVDGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G Q + P + + M+ F + R
Sbjct: 236 HAGNGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQP---QDEALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|443643758|ref|ZP_21127608.1| Vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. syringae B64]
gi|443283775|gb|ELS42780.1| Vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. syringae B64]
Length = 354
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDRGKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYNAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|124266194|ref|YP_001020198.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258969|gb|ABM93963.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 349
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A ST++ + + +I+R +DG + + C HR PLHLG
Sbjct: 8 LTNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 172
+ C YH ++ G+C K P + Q+ + K++S P E+ G +WIW G D P A +
Sbjct: 68 DEVACLYHALQFDCTGQCTKNPHGNGQIPKAAKVRSFPLEERYGFLWIWMGEDAPDLARL 127
Query: 173 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P P +G A M + + L++DN++DL+H H + LV
Sbjct: 128 PDFGELDKGPDTGV---AFTYMHMKANYELIIDNVMDLSHIDHVHGEIITTRGQLSPLVP 184
Query: 228 FL---------------TPASGLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGK 265
+ TPA + + P P D+ + PP + ++G ++ G
Sbjct: 185 QMREGEQAISARWEWQQTPAMLIFANFLPEPAAGARHFFDITWTPPANIQLSVGATQDG- 243
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
G + LH C P + T +
Sbjct: 244 --GALDLAGCIGQYDLHTCTPETANTTHYWF 272
>gi|109897171|ref|YP_660426.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699452|gb|ABG39372.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 349
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 144/349 (41%), Gaps = 50/349 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
N W+ VA + D + TM PF V FR G +++ C HR PL LG V
Sbjct: 9 NTWY-VACTPD--EITMAPFARKICGIALVFFRNTHGTVVALEDFCPHRGAPLSLGKVEN 65
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDE--PP 168
G++ C YHG DG + MP N ++++ PC E+ G IWIWPGD+
Sbjct: 66 GQLVCGYHGLRMGDDGATKAMP-----NQRVQAFPCIQRYAVVERYGYIWIWPGDKSLAD 120
Query: 169 TATIPCLLPPSGFEI-HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--------- 218
+ +P L P+ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 ESLLPKLEWPNNPNWGYGGGLYHIKCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVT 180
Query: 219 ----GWSVPS---LVKFLTP---ASGLQG--YWDPYPIDM----EFRPPCMVLSTIGISK 262
G S+ + + + P AS L+ D P+D F P ++ +G++
Sbjct: 181 TKVDGESIVTSRFMDNVMAPPFWASALRANDLADDIPVDRWQICRFNLPSHIMIEVGVAH 240
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
GK ++C + P S + M+ DF + R
Sbjct: 241 AGKGGYLAPKECKASSIVVDFITPESDHSIWYFWGMARDFKPQDSE---LTNSIRSGQGA 297
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 371
+ EDL ++ QQE + + L + D GVR R +E+ KQ
Sbjct: 298 IFAEDLDVLERQQENLLRHPDRTLLKLDIDAGGVRARR---MIERAIKQ 343
>gi|72382058|ref|YP_291413.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL2A]
gi|72001908|gb|AAZ57710.1| rieske 2Fe-2S family protein [Prochlorococcus marinus str. NATL2A]
Length = 444
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ V+ S +K+ + F + EP V++R ++GI CV++ C HR G V G++
Sbjct: 51 WYSVSSSESIKEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLV 110
Query: 121 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 168
CPYHG +S+ G C + + +++K+ PC E+EG I+I+ P
Sbjct: 111 CPYHGARFSSQGSCTNLDRITCQHIIDSNYDSYAKSIKLFQYPCVEKEGYIYIYYTGTPL 170
Query: 169 T--------ATIPCLLPPS-GF----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 215
++I LLP S GF + E+ ++ + +++N LD+ H + H T
Sbjct: 171 ANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDT 230
>gi|119504455|ref|ZP_01626534.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
gi|119459477|gb|EAW40573.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
Length = 364
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A+++++ D E+P VI++ + G+ + N C HR+ PL +G +
Sbjct: 9 LYNCWYAAAWTSEIDDGKPFSRTLLEKPIVIYKNESGVYVALDNRCCHRSAPLSMGRIEG 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGD--EPPTATI 172
++C YHG +Y G+C ++P N ++ S P ++ GM+WIW G+ + + I
Sbjct: 69 DCLRCMYHGMKYDPSGQCVEIPGQAKISSNHRVHSYPLVDRGGMLWIWMGEAHKANSDDI 128
Query: 173 PCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P P P + + L++DNL D +H F HTST
Sbjct: 129 PHFEPLDDPQWCGLPNRCYLHYDANWMLIVDNLADFSHLAFVHTSTLG 176
>gi|300864498|ref|ZP_07109363.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
gi|300337508|emb|CBN54511.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
Length = 350
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+ VA S ++K + + +P VI+R +++ C HR L G V
Sbjct: 21 NFWYVVARSNEVKTQPIAVI-LWNQPIVIYRDNTEEIRALEDRCPHRQVKLSHGQVKGDL 79
Query: 119 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHGW ++ G+C ++ + +L + KI+S P EQ+G IW++PGDE +
Sbjct: 80 LECAYHGWRFNASGECAEVDYLADNQKLPSCKIRSFPVKEQDGFIWLFPGDETKAEQVSL 139
Query: 175 LLPPSGFEIH--AEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
L P I+ A + V+ + L++NL+D+ H H + W+ P L
Sbjct: 140 LGLPEWEHINYIATVSVINCQAHYSFLIENLMDMYHG---HLHQDWQAWAEPVLQDLDED 196
Query: 232 ASGLQGYWDP---YPID 245
A + ++ Y ID
Sbjct: 197 ADRVDAHYQAQSYYKID 213
>gi|443478861|ref|ZP_21068556.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
gi|443015788|gb|ELS30604.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
Length = 329
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
K FW+PV + L ++ F + V++ +G P + C HR+ L LGSV +
Sbjct: 9 FKRFWYPVIPMSLLAEEQPKSFQLLGQKIVLWIDAEGKPAAALDRCCHRSAHLSLGSVKQ 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD------ 165
G I C YHGW+Y G C +P +N +I + C E+ G +W+ GD
Sbjct: 69 GAIACAYHGWQYDRSGSCLHVPQLPTDTPIPKNYRIHTFACEERYGYVWVCMGDPINKIA 128
Query: 166 EPPTATIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
E P A+ P L P +E+ + +++N +DLAH F HT+TF
Sbjct: 129 EIPEASDPQFRLIPEFYEVWNCAGLR-------VMENEMDLAHPTFVHTTTFGSA 176
>gi|440723531|ref|ZP_20903894.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440728015|ref|ZP_20908238.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
gi|440359506|gb|ELP96814.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440362544|gb|ELP99731.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
Length = 354
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDRENAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFNIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEA---LTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|383788948|ref|YP_005473517.1| putative oxidoreductase [Caldisericum exile AZM16c01]
gi|381364585|dbj|BAL81414.1| putative oxidoreductase [Caldisericum exile AZM16c01]
Length = 322
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ V S +LKD + F E V++R KDGI C+ + CAHR L G +
Sbjct: 2 IKNQWYIVLSSKELKDKP-IGLKRFGEKLVMWRTKDGI-ACIADKCAHRGASLSKGKIVN 59
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGDEPPT-A 170
IQCP+HG+EY + G+ +P+ N K+KS E+ G I+++ GDE
Sbjct: 60 NHIQCPFHGFEYDSSGRVVLIPANGKASKVPDNFKVKSYKVKEKNGFIFLFYGDESKAPG 119
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
IP G + E+ + ++N LD H PF H +T G
Sbjct: 120 EIPFFDWIDGSFTYDELNEPWNTHYSRCIENQLDPIHLPFVHHNTIGIG 168
>gi|2765429|emb|CAA75050.1| vanillate demethylase A [Pseudomonas putida]
Length = 353
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 37/311 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ ++ D + C E+ V +RG + V++ C RA PL LG V G
Sbjct: 4 RNTWYVACTPDEIADKPLGRQICGEKI-VFYRGHENRVAAVEDFCRTRA-PLSLGYVENG 61
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 62 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQAQAD--PSLI 119
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------------ 219
P + ++ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 PHLEWAVNDDWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPYHRHR 179
Query: 220 ---WSVPSLVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLE 267
S + + P A G D P++ F PP VL +G++ GK
Sbjct: 180 REVLSARHMENIMAPPFWRMALRGNGLADDVPVERWQICRFTPPSHVLIEVGVAHAGKGG 239
Query: 268 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 327
+ A+ + + P + + ++ +FA+ + + R ++ +ED
Sbjct: 240 YHAEQHKASSIVVWNFITPETDTSIWYFWVLACNFAAQDQALTANI---REGQGKIFSED 296
Query: 328 LRLVLGQQERM 338
L ++ QQ+ +
Sbjct: 297 LEMLERQQQNL 307
>gi|358460096|ref|ZP_09170285.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357076603|gb|EHI86073.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 371
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 126/308 (40%), Gaps = 57/308 (18%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++ W PVA ST+L D + EPWV+ R DG ++ C HR PL G V+
Sbjct: 12 LRHGWHPVALSTELGDQPL-GVRLLGEPWVLAR-LDGAVTAFEDRCPHRLAPLSAGRVDG 69
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CPYHGW ++ G C +P+ R + E+ G++W+ P DEP +
Sbjct: 70 ETLVCPYHGWRFAAGGDCVAVPALGPGVPAPRRARATAAWGVTERYGLVWVAP-DEPFSE 128
Query: 171 TIPCLLPPSGFEIHAEIVME---LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
+ LP + I +E GLL DN LD AH PF H T G +
Sbjct: 129 IME--LPEDADDAFDSISLEPSRTTAAAGLLADNFLDTAHFPFVHAGTIGAGEDM----- 181
Query: 228 FLTPASGLQGYWDPYPIDMEFRPPCMVL--STIGISKPGKLEGQN---TRQCATHLHQ-- 280
+ P PY +D + C+ L PG G R+ +T++ +
Sbjct: 182 -VVP---------PYRVDADGDGFCVTLEQEVANPEDPGVAAGIRPLVQRRVSTYVFRPP 231
Query: 281 -----------------LHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
+H CL P TR+ R+ D + ++ R F ++
Sbjct: 232 FMLRLRLEYPDAGITSAIHFCLQPEDEGATRVYTRLLRD--DLGGDAGRLRDAAR-FEQE 288
Query: 323 VLNEDLRL 330
+L+EDL L
Sbjct: 289 ILDEDLAL 296
>gi|295698951|ref|YP_003606844.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438164|gb|ADG17333.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 366
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C EP V +R +G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACMPDEVADKPLGRQIC-GEPMVFYRNAEGAVVALEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIP--- 173
+ C YHG E GK MP ++ I+S P E+ G +W+WPGD
Sbjct: 63 TLVCGYHGLEMGCQGKATGMPGQRVNGFPSIRSFPVIERYGFVWVWPGDAAKADAAKLHH 122
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
S + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWAESAEWAYGGGLYHIRCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTVAEGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 264
TS F + + P K +GL D P+D F PP VL +G++ G
Sbjct: 183 TVRTSRFMENVAAPPFWKMALRGNGLA---DDVPVDRWQICHFTPPSHVLIEVGVAHAG 238
>gi|443622585|ref|ZP_21107107.1| putative Alpha-subunit oxygenase [Streptomyces viridochromogenes
Tue57]
gi|443343894|gb|ELS58014.1| putative Alpha-subunit oxygenase [Streptomyces viridochromogenes
Tue57]
Length = 353
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + ++ E V++R + DG P + + C HR PL +
Sbjct: 6 RNQWYVAAYSHEVGRE-LLGRTILGETLVLYRTQEDGTPVVLHDRCVHRRYPLSEAPTRL 64
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPP 168
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD +P
Sbjct: 65 DGDRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGDAALADPQ 124
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TS 214
T L G+ + + + ++GLL+DNLLDL+H + H T+
Sbjct: 125 TIPRARHLDSPGW-VTVRGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAETPITT 183
Query: 215 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
+G + + + F ++G++G + D+E+ PC+ + ++ G
Sbjct: 184 EVDEGAGIVRVSRHMDDAECPPFYAKSTGIRGRITRWQ-DIEYHAPCLYVLHSRVAPVGV 242
Query: 266 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
L E + H + PS K + +S D+A+
Sbjct: 243 LPEADGSDPNGFHTEVTYAITPSGDGKVYDFWMVSRDWAT 282
>gi|338530424|ref|YP_004663758.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337256520|gb|AEI62680.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 357
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
RL N WF + S +L D + P V+FRG+ G P + + C HR PL LG V
Sbjct: 14 VRLPNAWFILCASNELGDKPLA-RTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRV 72
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPP 168
EG++QC YHGW + +G+C +P R + EQ+G +W++ PG EP
Sbjct: 73 KEGQLQCGYHGWRFDGEGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPT 132
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
T L + ++ P L+N LD+ H + H F
Sbjct: 133 TEPYRFPLLEAREYTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLF 180
>gi|302555436|ref|ZP_07307778.1| alpha-subunit oxygenase [Streptomyces viridochromogenes DSM 40736]
gi|302473054|gb|EFL36147.1| alpha-subunit oxygenase [Streptomyces viridochromogenes DSM 40736]
Length = 356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + ++ E V++R ++G P + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LLGRTILGETLVLYRTAEEGTPVVLHDRCVHRRYPLSEAPTRL 67
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD
Sbjct: 68 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD------- 120
Query: 173 PCLLPPSGFE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------- 212
P L P G + + + ++GLL+DNLLDL+H + H
Sbjct: 121 PALADPQGIPRARHLDSPGWVTVRGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVA 180
Query: 213 ----TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 259
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 181 ETPITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSR 239
Query: 260 ISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
I+ G L E + H + PS + + +S D+A+
Sbjct: 240 IAPAGVLPEADGSDPNGFHTEITYAITPSGDGEVYDFWAVSRDWAT 285
>gi|444916129|ref|ZP_21236252.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
gi|444712629|gb|ELW53546.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
Length = 340
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 49/345 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 115
+ W PVA S +++ + E V+FR G +++ C HR L LG V
Sbjct: 14 MAEVWTPVAMSREVRGKPL-GLTLAGERIVLFRDGRGTLSALRDQCPHRGVKLSLGKVGA 72
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----IKSLPCFEQEGMIWIW--PGDEPP 168
+G ++CP+HGW +S G C +P L K + + P E+ G+IW++ PG E P
Sbjct: 73 DGCLECPFHGWRFSASGSCTHIPLNALPEEKRQRYAVTAFPVRERGGLIWLYTRPGGEAP 132
Query: 169 TA-TIPCLLPPSGFEIHAEIVMELPIEH-GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 226
+P L G +H E H ++N+LD H PF H T +G L
Sbjct: 133 DEPYVPESLEKPG--VHVGFYAETWNAHWTRAMENMLDSPHLPFVHQRTIGRG-----LR 185
Query: 227 KFLTPASGLQGYWDPYPI------DMEFRPPCMVLS-------TIGISKPGKLEGQNTRQ 273
+ + P S ++ +P M+ PP L + I PG+
Sbjct: 186 RRMKPESTMEVEVEPTSTGFRTWSSMDGVPPQGSLDWLRPNGMRLNIPIPGR-------- 237
Query: 274 CATHLHQLHV-CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
L QLH+ C+P TR+L + DF ++ P + R + ++L+ED R ++
Sbjct: 238 ----LMQLHMWCIPVDANHTRMLLAAARDF---VRMQPLAALVDR-YNTRILHED-RAIV 288
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 377
+ V D+ + +R W +K A + +P
Sbjct: 289 ESSHPVEAPPVSEERSVATDRATLAFRRWYHERKKQATRTAADEP 333
>gi|420251385|ref|ZP_14754562.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398057977|gb|EJL49901.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 349
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 13/166 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+S D+ D + + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNTWYAAAWSRDVGAD-LSTRELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT-- 171
I+C YHG ++ G C K P R +++S P ++ G++WIW G EP A
Sbjct: 63 DGIECGYHGLQFDCSGACSKNPHGDGRIPPGARVRSFPAEDRHGLVWIWAG-EPSRANAS 121
Query: 172 -IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
IP L+ P + E+ + E L++DNL+DL+H + H
Sbjct: 122 LIPDFSHLVSPRLKTVGDEMTQKAHYE--LVVDNLMDLSHVNYLHA 165
>gi|148554606|ref|YP_001262188.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499796|gb|ABQ68050.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 338
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A ST++ D + C P V++R + G + + C HR PL G
Sbjct: 5 IRNLWYVAALSTEIADGPVGRRIC-SLPVVLYRERSGAVAALFDRCPHRFVPLSRGRCEG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI--- 172
R+ C YHG Y GKC P T R++ ++S P E+ G++WIW GD T+
Sbjct: 64 DRLVCGYHGLAYDGAGKCVANPQGTVTRSLDVRSFPVEERHGLVWIWMGDPALRDTVAIP 123
Query: 173 -------PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P + P G+ M L+ DN++DL+H F H T
Sbjct: 124 DFSLLDRPAMRPQYGY-------MWTAAHFELMTDNIMDLSHIEFLHADTLG 168
>gi|393760646|ref|ZP_10349453.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161144|gb|EJC61211.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 347
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A + L +++P E V++R +DG P ++++C HR PL G +
Sbjct: 3 VRNAWYVGALAAQLGR-SLLPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+++C YHG + G C K P ++ ++S PC E+ G++W+W GD P
Sbjct: 62 DQVECGYHGLTFDCSGSCTKAPGVAQIPKSAVVRSYPCAERYGLVWVWMGD-------PA 114
Query: 175 LLPPSGF-----------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L PS ++ MEL + + DNLLD +H + H S+F
Sbjct: 115 LADPSKLIDIPEWDNPEWGVNRGDAMELDCNYLYVTDNLLDPSHVSWVHQSSFG 168
>gi|365887865|ref|ZP_09426679.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
gi|365336509|emb|CCD99210.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
Length = 347
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEIKQ-ALLPRTICGKHVVMYRKSDGTIAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++S G+C MPS + N +++ P E+ +W+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFVWLWMGD--PALADPATI 124
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 220 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEG 243
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + L+ P + K + + ++ L + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDELI 300
Query: 331 VLGQQERM--NNGANVWNLPVGYDKLGVR 357
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|124025557|ref|YP_001014673.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL1A]
gi|123960625|gb|ABM75408.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL1A]
Length = 444
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ V+ S +K+ + F + EP V++R ++GI CV++ C HR G V G++
Sbjct: 51 WYSVSSSESIKEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLV 110
Query: 121 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 168
CPYHG +S+ G C + +++K+ PC E+EG I+I+ P
Sbjct: 111 CPYHGARFSSQGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGYIYIYYTGTPL 170
Query: 169 T--------ATIPCLLPPS-GF----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 215
++I LLP S GF + E+ ++ + +++N LD+ H + H T
Sbjct: 171 ANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDT 230
>gi|333896094|ref|YP_004469968.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333111359|gb|AEF16296.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 327
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ V S +LK + + F + V +R + C+ + C HR L LG V
Sbjct: 2 IKNQWYAVLDSKELKKNKPIGVTRFSQKLVFWRDELDNISCIFDKCCHRGASLALGKVAN 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
IQCP+HG++Y + GK +P+ L N K+ S E G IW+W G+ P
Sbjct: 62 NHIQCPFHGFKYDSSGKVTSIPANGKDRPVLSNFKVNSYIAKEAYGFIWVWYGE--PREN 119
Query: 172 IPCLL----PPSGFEI--HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+P + GF +EI + + ++N LD+ H PF H +T +G
Sbjct: 120 LPKIKFFEELKEGFSYGGFSEI---WRVHYTRAIENQLDVVHLPFVHNTTIGRG 170
>gi|325919763|ref|ZP_08181759.1| vanillate demethylase subunit A [Xanthomonas gardneri ATCC 19865]
gi|325549749|gb|EGD20607.1| vanillate demethylase subunit A [Xanthomonas gardneri ATCC 19865]
Length = 358
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-ALAPRKVCNLDVVLYRSTAGAVIALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS + N ++S P E+ +WIWPGD + T+ IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRSFPVAEKHRYVWIWPGDPAQADTSLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G I+A+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|21241137|ref|NP_640719.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106440|gb|AAM35255.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 358
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTSGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+ V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRSVVVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRAGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|146338927|ref|YP_001203975.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. ORS 278]
gi|146191733|emb|CAL75738.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 278]
Length = 347
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 220 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFESPCTVTIDVGVAPTGTGAPEG 243
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + L+ P + K + + ++ L + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYK--LSEQRLTTEI-REGVSGIFREDEFI 300
Query: 331 VLGQQERM--NNGANVWNLPVGYDKLGVR 357
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|262197943|ref|YP_003269152.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262081290|gb|ACY17259.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 367
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN+W+ + +L + EE V++R DG + + C HR PL G + +
Sbjct: 25 LKNYWYVACLAEELGRKKPLARTIMEERLVLWRDADGRAVAMLDRCLHRNAPLSEGDLFD 84
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATI 172
G I CPYHGW Y DG C +PS ++I++ P E++G++W+W G +
Sbjct: 85 GCIGCPYHGWTYDRDGACVNVPSAGPEGAPVALRIETFPVRERDGLVWVWMGGDVAPERE 144
Query: 173 PCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFTHTSTF 216
P +P M ++ + L++N +D+ H F H F
Sbjct: 145 PFAMPFYDTPGWRRYYMVTAFDNDVTSLVENFMDVPHTVFVHRGWF 190
>gi|334132860|ref|ZP_08506615.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
gi|333441770|gb|EGK69742.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
Length = 364
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 38/313 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L + W+ A S+++ + + + +I+R +G P + + C HR PLHLG
Sbjct: 17 LTDCWYVAALSSEVPAEGLFHRRILDTSVLIYRKAEGAPVALHDRCPHRFAPLHLGKRIG 76
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
+ C YH + G C P + K++S P E+ G +WIW GD P
Sbjct: 77 DDVVCAYHALRFDCSGACTHNPHGNGLIPKAAKVRSFPLLEKYGFVWIWMGDA--ALADP 134
Query: 174 CLLPPSG--FEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSLV 226
LP G + H A M + + + L++DN++DL+H H+ + +G P +
Sbjct: 135 AKLPDFGPLDDGHPNALAHTYMRMDVNYELIIDNVMDLSHIDHVHSEIISTRGQLSPLVP 194
Query: 227 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPGK 265
A + W+ P P D+ + PP + T+ +
Sbjct: 195 AVKEGADSVNARWEWSQQPAMLIFANFLPDPAAPARHFFDITWTPPANIQLTVAAVQD-- 252
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+G T + T + LH C P S T + + M+ H A + N
Sbjct: 253 -DGPLTLEHCTGQYDLHTCTPESATTTHYYFATRRNHDVENAEYNAMKIRAMHAAFE--N 309
Query: 326 EDLRLVLGQQERM 338
ED ++ Q+ M
Sbjct: 310 EDGPVIQATQDEM 322
>gi|422669981|ref|ZP_16729817.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330982326|gb|EGH80429.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFYIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEA---LTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|397615617|gb|EJK63540.1| hypothetical protein THAOC_15793 [Thalassiosira oceanica]
Length = 883
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
+ + W+ VA+ +K+ + + EP V++R DG C ++ C HR+ PL +G
Sbjct: 389 SASFNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDVCPHRSAPLSMGK 448
Query: 114 VN-EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----------IKSLPCFEQEGMIWI 161
+N EG+++C YHGW + DG E +P TQ+R+ +K+ E EG+IWI
Sbjct: 449 INDEGQLECMYHGWGFGKDGNIESIP-TQIRDGGSSKRSPPKRSCLKTYCVEEHEGLIWI 507
Query: 162 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 215
W G+ E + +P S + I + V++ ++ +++N LD H + H +
Sbjct: 508 WRGELLEADASKLPKTRDVSTYPI--DTVLDYNVDWQYIVENNLDSPHLFWLHNGS 561
>gi|388547602|ref|ZP_10150865.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
gi|388274362|gb|EIK93961.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
Length = 348
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 39/334 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C E V +R G +++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDELAPGPLGRQICGES-MVFYRNGSGQVAALEDFCPHRGAPLSLGRVVDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
++ C YHG DGK + MP ++ + + ++ C E+ G IW+WPG++ IP
Sbjct: 63 QLVCGYHGLVMGCDGKVQSMPGQRVASFPLTRTFACVERHGFIWVWPGEQALAEPGQIPH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVPSLV---- 226
L + + + + E+ ++ L++DNL+DL H + H S+ + ++P+
Sbjct: 123 LEWANNPQWAYGGGLYEIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEALPTTTVNGD 182
Query: 227 --------------KFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 268
F A G D P+D F PP V+ +G++ G L G
Sbjct: 183 EVVTARHMHNIMAPPFWRQALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAG-LGG 241
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE---QVLN 325
+ A + V + R +T + Y + + P Q L E ++ +
Sbjct: 242 YDAPD-AHKAASIVVDFITPRTETSIWYFWGM----ARRFRPEDQALTDTIREGQGRIFS 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ ++ L + D GVR R
Sbjct: 297 EDLEMLERQQRNLSAHPERRLLKLKIDVGGVRAR 330
>gi|187918962|ref|YP_001887993.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187717400|gb|ACD18623.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 352
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 135/346 (39%), Gaps = 41/346 (11%)
Query: 44 LNVS-GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTC 102
+NV G V T ++ +W VA+S LKD + E VI R +G + C
Sbjct: 9 INVEKGEVPELFTAMRKYWHAVAYSGQLKDKPL-GVTLLGESVVIAR-LNGEVRAMHGRC 66
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGM 158
H+ L LG V +G+I+CPYHGW++ GKC ++P+ T+ NV I E G+
Sbjct: 67 PHKGTALALGEVVDGKIECPYHGWQFDGGGKCVRVPAREELTEGMNVSIDCYYAAEHVGI 126
Query: 159 IWIWPGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
IW+ E P A +P L F I E L+N +D AH P+ H T
Sbjct: 127 IWV--ALEKPIAPLPDFPELSDPSFRIQQGPSYEWATSAPRRLENFVDFAHFPYVHDGTI 184
Query: 217 A----------KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG------I 260
K W +++F GY P P +F P + I
Sbjct: 185 GARDNPAVETVKVWREGHVLRF-----DRSGYLPPNPDLYKFLFPVRETDRVTPVNAYHI 239
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
P + P + TR+ + + DF + P +
Sbjct: 240 FLPATVHASFRMPNDKRYVLFMSASPVTEDLTRIFWWQARDF----RTEPMEDRFFIELE 295
Query: 321 EQVLNEDLRLVLGQQER--MNNGANVWN--LPV-GYDKLGVRYRLW 361
+ +L ED ++ Q+ + NG N + PV G D + + YR W
Sbjct: 296 DTILGEDKAIIESQRPKWFSFNGENRDDRETPVRGSDIVSIEYRRW 341
>gi|398824385|ref|ZP_10582719.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
gi|398224947|gb|EJN11235.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
Length = 349
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 33/308 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKP-ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 67 VVCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 124
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSL 225
P + + + ++ L+LDNL+DL H F H S+ + V
Sbjct: 125 PDMHWNHDPAWAGDGKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 226 VKFLTPASGLQG-----YW-----DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNT 271
K +T ++G +W P +D + F PC + +G++ G +
Sbjct: 185 EKTVTVTRWMRGIEAPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGD 244
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
R + L+ P + K + ++ + + R + +ED ++
Sbjct: 245 RSQGVNGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELIL 301
Query: 332 LGQQERMN 339
QQ M+
Sbjct: 302 EAQQRAMD 309
>gi|326328839|ref|ZP_08195174.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
gi|325953370|gb|EGD45375.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
Length = 367
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 127/320 (39%), Gaps = 49/320 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ A+ ++ + P ++R DG + + C HR PL G V
Sbjct: 20 RNAWYVAAWDHEVTAKQPLARTIAGVPLALWRNSDGRAVALADACWHRLAPLSKGKVLGD 79
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
IQCPYHG Y++ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 80 EIQCPYHGLRYNSAGRCTSMPAQETINPSAIVPSYPVVERYRYVWVWVGD--PDLADPAT 137
Query: 176 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG----- 219
+P G I+A P + L+LDNL+DL H F H+S+ +
Sbjct: 138 VPDMHQMDSPDWAGDGETIYA------PCNYQLVLDNLMDLTHEEFVHSSSIGQDELSEA 191
Query: 220 -WSVPSLVKFLT----------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 259
+ V + +T P L+ D +P +D + F P + +G
Sbjct: 192 EFEVSHDDRHVTVTRWMRDIDAPPFWLKNMRDKFPGFTGKVDRWQIIHFEAPSTICIDVG 251
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 319
++K G + R + ++ P + + + + ++ L+ L R
Sbjct: 252 VAKAGTGAPEGDRSQGVNGFVMNTITPETARTSHYFWAFMRNYR--LESQTITTQL-RQG 308
Query: 320 AEQVLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 309 VHGVFGEDEEMLAAQQRAID 328
>gi|149916805|ref|ZP_01905307.1| dioxygenase, iron-sulfur subunit, putative [Plesiocystis pacifica
SIR-1]
gi|149822522|gb|EDM81911.1| dioxygenase, iron-sulfur subunit, putative [Plesiocystis pacifica
SIR-1]
Length = 376
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N+W+PV +S DL + + + + +FRG DG V++ CAHR L G V +
Sbjct: 28 NYWYPVGYSKDLAPGEVTKVTFWGKDFALFRGSDGSLRAVEDRCAHRQLALSGGEVRGCQ 87
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 171
+ CPYHGW + DG+ +P +L +++ E+ G++W++PGD T
Sbjct: 88 VVCPYHGWTFDGDGRLVDVPHELFDKKLPKIRLPDFAVRERYGLMWLFPGDRDRAETVAM 147
Query: 172 --IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHA 208
IP L P + + H +++DN+ D HA
Sbjct: 148 PEIPELEGPDAWAC-VPVDFTWQAHHSMIIDNVSDFTHA 185
>gi|126661243|ref|ZP_01732316.1| oxidase-related protein [Cyanothece sp. CCY0110]
gi|126617472|gb|EAZ88268.1| oxidase-related protein [Cyanothece sp. CCY0110]
Length = 349
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 48/356 (13%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L+N W+ DLK MV EP ++ R +DG +++ C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHKKMLGEPVLVGRHEDGEVFAMRDICPHRGIPLQYGW 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 162
+ + C YHGW++S+ DG+C ++PS + +++ + PC E +G IW++
Sbjct: 62 IEGKDVCCCYHGWKFSSEDGRCREIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 163 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
P PP TIP + P EI I I+H ++ L+D AH P+ H+S
Sbjct: 122 SKKELDPSTIPPVPTIPDFGKVSPGLSEI---IHFACHIDHAII--GLMDPAHGPYVHSS 176
Query: 215 TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-Q 273
+ + VK + ++P P+ P M +S ++P K+ G +
Sbjct: 177 WWWRSGPRKFRVK--------EKQYEPVPLGFRLVPYEMPVS----ARPYKILGNKVSIE 224
Query: 274 CATHLHQLHV-CLPSSRKKTRLLYRMS-------LDFASVLKHVPFM---QYLWRHFAEQ 322
L + L R LL ++ + F S+ +P+M + L +
Sbjct: 225 IVFELPSVRTEILRGDRYSACLLTTITPIDETECIAFQSIYWTIPWMGLFKPLLSLLTRK 284
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
L +D +V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 285 FLAQDRDVVIQQQEGLVYDPPLMLIDDADTQAKWYFRLKQEYQKAQAENRPFKNPV 340
>gi|262371405|ref|ZP_06064722.1| vanillate O-demethylase oxygenase subunit [Acinetobacter johnsonii
SH046]
gi|262313627|gb|EEY94677.1| vanillate O-demethylase oxygenase subunit [Acinetobacter johnsonii
SH046]
Length = 358
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ DL+D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IRNAWYVACRPEDLQDKPLGRTICGEKI-VFYRGKENTVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG +GK MP+ ++ K+ E+ G +W+WPG++ L
Sbjct: 62 GNLVCGYHGLVMGCEGKAVAMPAQRINGFPCNKAYAVVEKFGFVWVWPGEK--NLADESL 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPVLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|114570905|ref|YP_757585.1| Rieske (2Fe-2S) domain-containing protein [Maricaulis maris MCS10]
gi|114341367|gb|ABI66647.1| Rieske (2Fe-2S) domain protein [Maricaulis maris MCS10]
Length = 349
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 115
+K+ W+ A S++LK + + +P + R DG +++ C HR L G
Sbjct: 3 VKDLWYFGALSSELKPGQHLHRELLGQPVLFGRDHDGKAYALKDICPHRGILLSGGEAQN 62
Query: 116 ---EGRIQCPYHGWEYSTDGKCEKMPS--------TQLRNVKIKSLPCFEQEGMIWIWPG 164
E +++CPYHGW + TDG C +PS L ++++ P E +G+IWIW
Sbjct: 63 HDGETQVECPYHGWRFRTDGSCAAIPSLTADQAEAMDLTRIRVRRFPVHEDQGLIWIWYA 122
Query: 165 DEPPTATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
DE T P + PP ++ + ++H ++ L+D AH P+ H
Sbjct: 123 DEDQADTAPSIDPPKLDIPEGHKPKLVVHDIFNCHVDHAVI--GLMDPAHIPYIH 175
>gi|58038766|ref|YP_190730.1| ferredoxin subunit of ring-hydroxylating dioxygenase [Gluconobacter
oxydans 621H]
gi|58001180|gb|AAW60074.1| Putative ferredoxin subunit of ring-hydroxylating dioxygenases
[Gluconobacter oxydans 621H]
Length = 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+P+A+S DLK + P + R ++G +++ CAHR PL LG V+
Sbjct: 24 DFWYPLAWSKDLKRGKTIGRRFGRFPIALVRPEEGSVFALEDRCAHRQVPLSLGKVSGEA 83
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIP 173
+QC YHGW Y G+C +P R + +K+ PC E GMI+I+PGD ++P
Sbjct: 84 VQCCYHGWAYGRSGRCIDVPYLGKRKLPNGVKTYPCREAGGMIFIFPGDAEKAESVP 140
>gi|383644423|ref|ZP_09956829.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 127/338 (37%), Gaps = 39/338 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
K W+ A + +L D + C +P V FRG +G +++ C HR PL LG V +G
Sbjct: 17 KEAWYVAASAGELADRPLGRTIC-GQPMVFFRGAEGQAIALEDFCPHRGAPLSLGFVRDG 75
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD---EPPTATIP 173
+ C YHG G+ MP ++ R ++ E+ G +W+WPGD P
Sbjct: 76 ELVCGYHGLVMGCTGRATSMPGQRVDRFAGVRRFAVIERYGFLWVWPGDFETADPARLHH 135
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------------------ 215
S + + ++ L++DNL+DL H + H+S+
Sbjct: 136 LEWAESPEWAYGGGYYHIHCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEAPVETLIDGE 195
Query: 216 ------FAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
F G P K +GL D P+D F P VL +G++ GK
Sbjct: 196 QVVTRRFMDGIEAPPFWKMALRGAGLP---DDQPVDRWQICRFTLPSHVLIEVGVALAGK 252
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ + P + + M+ FA + + R +
Sbjct: 253 GGYDAEDRWKASSIVVDFITPETETSHHYFWGMARRFA--VADTALTDTI-RTGQGTIFG 309
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 363
EDL ++ QQ + + + D GVR RL D
Sbjct: 310 EDLEMLERQQANLLRYPERKLMKLNIDAGGVRSRLMID 347
>gi|172039308|ref|YP_001805809.1| putative Rieske 2Fe-2S family protein [Cyanothece sp. ATCC 51142]
gi|354552425|ref|ZP_08971733.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
gi|171700762|gb|ACB53743.1| putative rieske 2Fe-2S family protein [Cyanothece sp. ATCC 51142]
gi|353555747|gb|EHC25135.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
Length = 349
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 149/354 (42%), Gaps = 44/354 (12%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L+N W+ DLK MV EP ++ R +DG ++N C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHKKMLGEPVLVGRHEDGEVFAMRNICPHRGIPLQYGW 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 162
+ + C YHGW++S+ DG C ++PS + +++ + PC E +G IW++
Sbjct: 62 MEGKDVCCCYHGWKFSSEDGHCREIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 163 ------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P PP TIP S I I I+H ++ L+D AH P+ H+S +
Sbjct: 122 SKKELDPTTIPPVPTIPDFGKVSP-GISETIDFACHIDHAII--GLMDPAHGPYVHSSWW 178
Query: 217 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-QCA 275
+ VK + ++P P+ P M +S ++P K+ G +
Sbjct: 179 WRSGPRKFRVK--------EKQYEPVPLGFRLVPYEMPVS----ARPYKILGNKVSIEIV 226
Query: 276 THLHQLHV-CLPSSRKKTRLLYRMS-------LDFASVLKHVPFM---QYLWRHFAEQVL 324
L + L R LL ++ + F S+ +P+M + L + L
Sbjct: 227 FELPSVRTEILRGDRYSACLLTTITPIDETQCIAFQSIYWTIPWMGLFKPLLSLLTRKFL 286
Query: 325 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
+D +V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 287 AQDRDVVIQQQEGLAYDPPLMLIDDADTQAKWYFRLKQEYQKAQAENRPFQNPV 340
>gi|390991190|ref|ZP_10261461.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372554091|emb|CCF68436.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 353
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+ V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRSVVVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRAGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|427724958|ref|YP_007072235.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Leptolyngbya
sp. PCC 7376]
gi|427356678|gb|AFY39401.1| Rieske (2Fe-2S) iron-sulfur domain protein [Leptolyngbya sp. PCC
7376]
Length = 363
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 30/233 (12%)
Query: 27 TSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEP 84
TS+QS+ V G + ++ KN W+ A S ++ D PF ++E
Sbjct: 5 TSQQSVIAVSGSSDVRVCGIN----------KNHWYVAALSREVIDQ---PFGLTLWKEK 51
Query: 85 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQ 141
+V+FR + G +++ C HR L G V R++C YHGW++ +G C +P Q
Sbjct: 52 FVLFRDRQGSVHALEDRCPHRQVKLSSGQVVGDRLECAYHGWQFDAEGTCAHVPYLAENQ 111
Query: 142 LR-NVKIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIE--H 195
R N KI+SLP EQ+G IW++PGD P LP + V + E
Sbjct: 112 RRPNCKIRSLPVREQDGFIWVFPGDLETLEEQKIEPFSLPEWAHLNYIVTVSVIDCEGHF 171
Query: 196 GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDP---YPID 245
L++NL+D+ H H + W+ L + + +++ Y ID
Sbjct: 172 SYLIENLMDMYHG---HLHNDYQAWASAKLEGLESSEMRVDAHYEAQSYYKID 221
>gi|425899118|ref|ZP_18875709.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397890090|gb|EJL06572.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 353
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 30/237 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGLEGRVAAVEDFCPHRGAPLALGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEP---PTATIP 173
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P
Sbjct: 63 NLVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQALADPAQIHH 122
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS-------------TFAKGW 220
S + + + ++ L++DNL+DL H + H S T +G
Sbjct: 123 LEWAVSDEWAYGGGLFHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVEGD 182
Query: 221 SVPS---LVKFLTP-----ASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
V + + + P A G D P+D F PP VL +G++ G+
Sbjct: 183 EVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGQ 239
>gi|197106601|ref|YP_002131978.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
gi|196480021|gb|ACG79549.1| putative phenylpropionate dioxygenase [Phenylobacterium zucineum
HLK1]
Length = 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 25/175 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 115
L + W+ A S+DLK ++ EP ++ RG G +++ C HRA PL G V
Sbjct: 20 LTDIWYFAALSSDLKPGRPARYEILGEPVMLGRGPSGQLFALRDICPHRAAPLSAGRIVR 79
Query: 116 EGR---IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-- 164
+G+ ++CPYHGW++ DG C +PS + ++++ P E +G++++W G
Sbjct: 80 DGQGEAVECPYHGWKFGADGGCTAIPSLTADQAMDIGRIRVRRYPVAESQGLVFVWIGRD 139
Query: 165 -----DEPPTATIPCLL--PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
D+PP P ++ PP ++ +V + I+H ++ L+D AH P+ H
Sbjct: 140 AASEPDQPPP-VFPGVVGGPP---KLVDRMVFDAHIDHAVV--GLMDPAHGPYVH 188
>gi|428224503|ref|YP_007108600.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
gi|427984404|gb|AFY65548.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
Length = 440
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 142/340 (41%), Gaps = 50/340 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIF--RGKDGIPGCVQNTCAHRACPLHLGSVNE-- 116
W+PV+ DL + P + VI+ R D + + C HR PL G V+E
Sbjct: 12 WYPVSPLEDLDPECPTPVVVLGKRIVIWKPRFSDHYRAFL-DQCPHRLAPLSEGRVDEKT 70
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------SLPCFEQEGMIWIWPGDEPP 168
G + C YHGW++ G C ++P + + K +LP G++W+WP +
Sbjct: 71 GHLMCSYHGWQFDEQGTCTQIPQAEDSELVAKNRDRYCVTALPMQAVNGLLWVWPDPDSA 130
Query: 169 TATIPCLLPPSGF------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 221
LP S + + A IV +L + L++NL D +H PF H + +
Sbjct: 131 HLASAQALPLSPYWNAGSEFVWASIVRDLEYDWQTLVENLADPSHVPFAHHGVQGRRERA 190
Query: 222 VPSLVKFLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 276
P+ +K + + +G + + F PPC + I + RQ
Sbjct: 191 QPTPIKIVESTQDRIEAKSEG---SFTTKITFTPPCHLEYAISLG--------GDRQVGL 239
Query: 277 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRLV--- 331
+ C+P + K+R++ + S +FA L + W H + +L+ D+ L+
Sbjct: 240 ----VTYCVPVAPGKSRIVAQFSRNFAKRLHQI--TPRWWDHISVRNSILDGDMILLHYQ 293
Query: 332 ---LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
L Q+ + + + +P D+L + +R W D +G
Sbjct: 294 EKELQQRSQTEDWKTAYKMPTSADRLVIEFRRWIDQYCQG 333
>gi|357030860|ref|ZP_09092804.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
morbifer G707]
gi|356415554|gb|EHH69197.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
morbifer G707]
Length = 376
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+PVA+S +LK + +P + R DG +++ CAHR PL LG V+
Sbjct: 42 DYWYPVAWSRELKRGKTIGTRYAGQPIALVRPMDGKVFALEDRCAHRQVPLSLGKVSGEA 101
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ PC EQ+G+I+I+PGD ++P
Sbjct: 102 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREQDGLIFIFPGDPAKADSVP-- 158
Query: 176 LPPSGFEIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P G ++ + + +NL+D+ H F H+ +
Sbjct: 159 FPKLGSVADPAYKTRRFGEKVNCHYSFMHENLMDMNHQ-FMHSKQMGQ 205
>gi|345008760|ref|YP_004811114.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces
violaceusniger Tu 4113]
gi|344035109|gb|AEM80834.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces
violaceusniger Tu 4113]
Length = 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 144/343 (41%), Gaps = 40/343 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A+ ++ + ++ EP +R + D + + C HR PL G ++
Sbjct: 15 RNQWYVAAYGREIGRE-LLGRTILNEPIAFYRAESDDTVIALADRCVHRRYPLTAGRLDG 73
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPPTA 170
+ C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD +P +
Sbjct: 74 DTVVCGYHGFTYDTGGTCVFVPGQKRVPRTARVPSYPVVEQDSLVWVWIGDPALADPRSV 133
Query: 171 -TIPCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------TS 214
P L P + ME + ++GLL+DNLLDL+H + H T+
Sbjct: 134 PRAPWLADPRWTTVGG---MEPIDADYGLLVDNLLDLSHETYLHSGYIGTAEVAETPITT 190
Query: 215 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
+G V + + F ++G+ G + D+E+ PC+ L I+ G
Sbjct: 191 EVDEGAGVVRVSRHMDDAECPPFYARSTGIDGRITRWQ-DIEYHAPCLYLLHSRIAPAGV 249
Query: 266 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV-PFMQYLWRHFAEQV 323
L + A H+ + PS+ + + +S DFA + V F+ L R Q
Sbjct: 250 LPRPDGSDPDAFHVEITYAITPSTDRHVYDFWAVSRDFAQDDEEVTTFLHDLNRTVVLQD 309
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 366
+ L L+ E G ++ + L R L R A E
Sbjct: 310 VAA-LNLLQKALETEREGYQELSINIDTGGLAARRILARLAAE 351
>gi|148253687|ref|YP_001238272.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
gi|146405860|gb|ABQ34366.1| vanillate demethylase subunit A [Bradyrhizobium sp. BTAi1]
Length = 347
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGSIAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTFMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 220 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEG 243
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + L+ P + K + + ++ + + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLTEQR---LTTEIREGVSGIFREDELI 300
Query: 331 VLGQQERM--NNGANVWNLPVGYDKLGVR 357
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDANPGRVFYNLNIDAGAMWAR 329
>gi|114327153|ref|YP_744310.1| Rieske (2Fe-2S) domain-containing protein [Granulibacter
bethesdensis CGDNIH1]
gi|114315327|gb|ABI61387.1| rieske [2Fe-2S] domain protein [Granulibacter bethesdensis CGDNIH1]
Length = 350
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S +++ EP V+ RG+ G +++ CAHR PLH G V
Sbjct: 23 DYWYPLAWSGEIRKGKATGRHFAGEPIVLVRGESGRVYALEDRCAHRQVPLHAGVVEGDC 82
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW Y G+C +P +L N +++ PC E+EG+++I+PGD P
Sbjct: 83 LRCCYHGWTYDMSGRCIDVPYLGKDKLPN-GVRAYPCQEKEGLVFIFPGDAARAEMTPLP 141
Query: 176 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ PS + E+ + + +NL+D+ H F H +
Sbjct: 142 VLPSISDPAYRTRRFGREVACHYSFMHENLIDMNHQ-FLHRKQMGQ 186
>gi|16126632|ref|NP_421196.1| vanillate O-demethylase oxygenase [Caulobacter crescentus CB15]
gi|13423928|gb|AAK24364.1| vanillate O-demethylase oxygenase, subunit A [Caulobacter
crescentus CB15]
Length = 353
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 120/308 (38%), Gaps = 34/308 (11%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 145
V RGKD P +++ C HR PL LG V +G + C YHG +G+ MP ++
Sbjct: 36 VFHRGKDDRPVALEDFCPHRGAPLSLGFVRDGELVCGYHGLTMGCEGRATAMPGQRVAAF 95
Query: 146 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 201
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 96 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWADSPDWAYGGGLYHIACDYRLMVDN 155
Query: 202 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 235
L+DL H + H TS F +G P + +GL
Sbjct: 156 LMDLTHETYVHATSIGQKEIDEAPVTTRLEGEEVVTSRFMEGIHAPPFWRMALRGAGLPE 215
Query: 236 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 295
D + I F P V+ +G++ G + P +
Sbjct: 216 NALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYHAPADKKVSSVVVDFITPETETSHHYF 274
Query: 296 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 355
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 275 WGMARSFA--VGDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAYPDRKLLKLNIDAGG 331
Query: 356 VRYRLWRD 363
VR R+ D
Sbjct: 332 VRSRMAID 339
>gi|381171298|ref|ZP_09880445.1| rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688215|emb|CCG36932.1| rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 358
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+ V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRSVVVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRAGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|428772905|ref|YP_007164693.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428687184|gb|AFZ47044.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium stanieri
PCC 7202]
Length = 354
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA S ++KD V + V+FR G +++ C HR L G V +
Sbjct: 18 NHWYVVARSVEVKDQP-VSVTLWHNEIVLFRDSQGNINALEDRCPHRQVKLSPGKVVDDN 76
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHGW++ +G C +P R KIK P E +G IW++PGD A P
Sbjct: 77 IECAYHGWQFDKEGNCSFVPYLDERQKLPRCKIKRYPVQELDGFIWLFPGDGDSEAVSPM 136
Query: 175 LLPPSGFEIHAEIVMEL--PIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 232
LP + V E+ P + L++NL+D+ H H + W+ +L K
Sbjct: 137 GLPEWEHLNYIASVAEVDCPGHYSYLIENLMDMHHG---HLHDNYQAWASATLNKIDMSD 193
Query: 233 SGLQGYWDP---YPID 245
+ + +D Y ID
Sbjct: 194 TRVDVLYDAQSYYRID 209
>gi|21224976|ref|NP_630755.1| oxidoreductase subunit alpha [Streptomyces coelicolor A3(2)]
gi|3334811|emb|CAA19959.1| oxidoreductase alpha subunit [Streptomyces coelicolor A3(2)]
Length = 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 144/339 (42%), Gaps = 46/339 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + ++ EP V++R + DG P + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LLGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRL 67
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ RI C YHG+ Y T G C +P + R ++ S P E++ ++W+W GD P
Sbjct: 68 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVAERDSLVWVWIGD--PALAD 125
Query: 173 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 212
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 PEAVPRARHLDAPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAET 182
Query: 213 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
T+ +G + + + F ++G+ G D + D+E+ PC+ + ++
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQ-DIEYHAPCLYVLHSRVA 241
Query: 262 KPGKLEGQNTRQ-CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 320
G + + H + PS K + +S D+A+ ++L++
Sbjct: 242 PTGTVPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWAT--DDAEVTEFLYKSNR 299
Query: 321 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V+ + L L Q+ A L + D G+ R
Sbjct: 300 TVVMQDVDALNLLQRTLGGERAGYQELSINIDTGGLAAR 338
>gi|254461027|ref|ZP_05074443.1| vanillate O-demethylase oxygenase subunit [Rhodobacterales
bacterium HTCC2083]
gi|206677616|gb|EDZ42103.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 355
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ +S D +D + E+ V+FR DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSKDFGED-LRAITITEQNLVMFRSTDGQIVALEDRCPHRLLPLSKGKRIG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+QC YHG + TDGKC ++P + +++ P E G++WIWPG+ A P
Sbjct: 63 DTVQCGYHGMTFGTDGKCVRVPGQDNLPASAYVETFPVHEAHGIVWIWPGEAALAADTPV 122
Query: 175 LLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
P + H + L + + +NL+D AH F H +T S
Sbjct: 123 FDLPEFSDPNWHAHHGDGLHLNANYLNVAENLVDPAHVSFVHPTTLGSAAS 173
>gi|310824238|ref|YP_003956596.1| rieske family iron-sulfur cluster-binding protein [Stigmatella
aurantiaca DW4/3-1]
gi|309397310|gb|ADO74769.1| Iron-sulfur cluster-binding protein, Rieske family [Stigmatella
aurantiaca DW4/3-1]
Length = 360
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
RL N WF + S +L ++ P V+FRG G P + + C HR PL LG V
Sbjct: 20 VRLPNCWFILCASGELGGKPLM-RTLQGTPLVLFRGDGGRPAALLDRCPHRNVPLSLGRV 78
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPP 168
EG++QC YHGW + G+C +P T+ + S EQ+G +W++ PG EP
Sbjct: 79 VEGQLQCGYHGWRFDAAGECRAIPGLTGETRAKARCAASYATREQDGFVWVYSTPGVEPT 138
Query: 169 TA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
+ P L P + V+ P L+N LD+ H F H F
Sbjct: 139 SEPYRFPLLDAPGYSSVRR--VVRAPGSLHAALENTLDVPHTAFLHGGLF 186
>gi|27377501|ref|NP_769030.1| vanillate O-demethylase oxygenase [Bradyrhizobium japonicum USDA
110]
gi|27350645|dbj|BAC47655.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 110]
Length = 354
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 35/309 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 13 NAWYAAAWDAEVKP-ALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDT 71
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 72 VVCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 129
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------------- 217
P + + + ++ L+LDNL+DL H F H S+
Sbjct: 130 PDMHWNHDPAWAGDGKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 189
Query: 218 -KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
K +V ++ + P G G D + I + F PC + +G++ G +
Sbjct: 190 EKTVTVTRWMRNIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEG 248
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + L+ P + K + ++ + + R + +ED +
Sbjct: 249 DRSQGVNGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELI 305
Query: 331 VLGQQERMN 339
+ QQ M+
Sbjct: 306 LEAQQRAMD 314
>gi|406039915|ref|ZP_11047270.1| vanillate O-demethylase oxygenase [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 358
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ D++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEDIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG +GK MP+ ++ KS E+ G IW+WPG++ T
Sbjct: 62 GNLVCGYHGLVMGCEGKTISMPAQRVTGFPCNKSYAVVEKMGFIWVWPGEK--TLANEAD 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPVLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|414079207|ref|YP_007000631.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413972486|gb|AFW96574.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 443
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 140/339 (41%), Gaps = 57/339 (16%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE--G 117
W+P+ DL+ P + VI++ K + C HR PL G + + G
Sbjct: 11 WYPLIPIEDLEPHKPKPMTLLGKRLVIWKPTKSETYRVFLDQCPHRLAPLSEGRIEDKTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWP------ 163
+ C YHGWE++ +G C+++P + N + S P +Q+ ++W+WP
Sbjct: 71 NLMCSYHGWEFNENGICQRVPQAENPEIVTKNQDNFCVISFPVRQQQELLWVWPDEKTAA 130
Query: 164 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 219
+ P P + GF + + + +L + L++N+ D +H PF H K
Sbjct: 131 IAENTPLPLSPQIDAEKGF-VWSNYIRDLEYDWQTLVENVADPSHVPFAHHGVQGNRDKA 189
Query: 220 WSVP-SLVKF------LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
+P ++VK + A GL P + F PPC + I + GK
Sbjct: 190 QPIPINIVKSTMDLIEVDIARGL-------PTTITFEPPCRLEYAISLGNTGK------- 235
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
L + C+P S K+R++ + +FA L + + W H E+ L D ++
Sbjct: 236 ----KLGLVVYCIPVSPGKSRIVAQFPRNFAKTLHRI--IPRWWNHINERHLVLDGDMIF 289
Query: 333 GQQER--------MNNGANVWNLPVGYDKLGVRYRLWRD 363
QQ+ + + LP D+L + +R W D
Sbjct: 290 LQQQEYYLQQKQLTQSWKTAYKLPTNADRLVIEFRNWFD 328
>gi|429210389|ref|ZP_19201556.1| vanillate monooxygenase [Pseudomonas sp. M1]
gi|428159163|gb|EKX05709.1| vanillate monooxygenase [Pseudomonas sp. M1]
Length = 352
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 131/338 (38%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +RG +G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQVCGEK-MVFYRGPEGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG +G E MP ++R I+ E+ G IW+WPGD P L+
Sbjct: 63 KLICGYHGLAMGCEGHTESMPGQRVRGFPAIRKFAVEERYGFIWVWPGD--AAQADPALI 120
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + + + ++ L++DNL+DL H + H ++ + + P
Sbjct: 121 HHLEWADNPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHANSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 KTRVEGEEVITERHMQNVMAPPFWRLALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G Q + P S + M+ +F + R
Sbjct: 236 HAGHGGYHAPAQHKAASIVVDFITPESETSIWYFWGMARNFQP---QDAALTATIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFGEDLEMLEQQQQNLLRHPQRQLLKLNIDAGGVQSR 330
>gi|221235412|ref|YP_002517849.1| vanillate demethylase oxygenase subunit A vanA [Caulobacter
crescentus NA1000]
gi|220964585|gb|ACL95941.1| vanillate demethylase oxygenase subunit A vanA [Caulobacter
crescentus NA1000]
Length = 358
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 120/308 (38%), Gaps = 34/308 (11%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 145
V RGKD P +++ C HR PL LG V +G + C YHG +G+ MP ++
Sbjct: 41 VFHRGKDDRPVALEDFCPHRGAPLSLGFVRDGELVCGYHGLTMGCEGRATAMPGQRVAAF 100
Query: 146 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 201
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 101 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWADSPDWAYGGGLYHIACDYRLMVDN 160
Query: 202 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 235
L+DL H + H TS F +G P + +GL
Sbjct: 161 LMDLTHETYVHATSIGQKEIDEAPVTTRLEGEEVVTSRFMEGIHAPPFWRMALRGAGLPE 220
Query: 236 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 295
D + I F P V+ +G++ G + P +
Sbjct: 221 NALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYHAPADKKVSSVVVDFITPETETSHHYF 279
Query: 296 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 355
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 280 WGMARSFA--VGDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAYPDRKLLKLNIDAGG 336
Query: 356 VRYRLWRD 363
VR R+ D
Sbjct: 337 VRSRMAID 344
>gi|405351774|ref|ZP_11023192.1| Phenylpropionate dioxygenase [Chondromyces apiculatus DSM 436]
gi|397093075|gb|EJJ23807.1| Phenylpropionate dioxygenase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 393
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK++W+ ST+L+ + F V+FR G P +++ C HR L G+V +
Sbjct: 32 LKDYWYVACLSTELRPGKPLARTLFGTGLVLFRDAQGQPTALRDRCLHRNARLSRGAVFD 91
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNV----------------KIKSLPCFE 154
GRI CPYHGW Y G ++PS ++L N ++ P E
Sbjct: 92 GRIGCPYHGWVYDASGAVVEVPSLGPSQRSELLNAEACAREGLKPEPCALGRVSRFPAVE 151
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFTH 212
Q+G+++++ G + P P +P G + M +G+ L++N +D+ H F H
Sbjct: 152 QDGLVFVYMGGDAPARAAPFRVPHWGQDGWTVYFMVTRFPNGVTNLVENFMDVPHTLFVH 211
Query: 213 TSTFAK 218
F K
Sbjct: 212 PGWFRK 217
>gi|218246485|ref|YP_002371856.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166963|gb|ACK65700.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 370
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 32/350 (9%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P ++ L+N W+ LK M EP ++ R +DG +++ C HR PL
Sbjct: 21 PMSSLLRNAWYVALPGKQLKPGKMTHKKMLGEPVLVGRREDGEVFAMRDICPHRGIPLQY 80
Query: 112 GSVNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-- 162
G + + C YHGW+++T DG+C ++PS + +++ + PC E +G IW++
Sbjct: 81 GWLEGDGVCCCYHGWKFNTSDGRCSEIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFA 140
Query: 163 --------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
P + PP TIP + P I I I+H ++ L+D AH P+ H
Sbjct: 141 EDSKKEINPSELPPVPTIPDFGKVEPG---ISETIHFACHIDHAII--GLMDPAHGPYVH 195
Query: 213 TSTFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 271
+S + + VK QG+ PY + + RP ++ + + I E +
Sbjct: 196 SSWWWRSGPRKFRVKEKQYEPVAQGFRLVPYDMPVSARPYKILGNQVSIEI--VFELPSV 253
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDL 328
R + CL ++ T + F S+ +P+M + L Q L +D
Sbjct: 254 RTEILRGDRYSACLLTT--ITPIDENECEAFQSIYWTIPWMGLFKPLLSLLTRQFLAQDR 311
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
+V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 312 DVVIQQQEGLKYNPALMLIDDADTQAKWYFRLKQEYQKSQAENRPFKNPV 361
>gi|421604687|ref|ZP_16046796.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
gi|404263204|gb|EJZ28775.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
Length = 343
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 127/315 (40%), Gaps = 47/315 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 2 NAWYAAAWDAEVKP-ALLPRTICGKHIVMYRKADGSVAALEDACWHRLVPLSKGRLEGDT 60
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 61 VVCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 118
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------- 217
P G IH + ++ L+LDNL+DL H F H S+
Sbjct: 119 PDMHWNHDPAWAGDGKTIHVK------CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAP 172
Query: 218 -------KGWSVPSLVKFLTP------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
K +V ++ + P G G D + I + F PC + +G++ G
Sbjct: 173 FDVTHGEKTVTVTRWMRDIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTIAIDVGVAPTG 231
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ R + L+ P + K + ++ + + R +
Sbjct: 232 TGAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIF 288
Query: 325 NEDLRLVLGQQERMN 339
+ED ++ QQ M+
Sbjct: 289 HEDELILEAQQRAMD 303
>gi|346723290|ref|YP_004849959.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346648037|gb|AEO40661.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 358
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGTVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWAHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|37521491|ref|NP_924868.1| oxygenase, Rieske iron-sulfur component [Gloeobacter violaceus PCC
7421]
gi|35212488|dbj|BAC89863.1| gll1922 [Gloeobacter violaceus PCC 7421]
Length = 346
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA S +LK + + E +FRG DG+ V++ C HR L G V EG
Sbjct: 16 NCWYAVAQSAELKTEPR-SITLWGEAIALFRGADGVAHAVEDRCPHRQVKLSHGRVVEGS 74
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHGW + DG+C +P + L ++++ P E +G +W++ GD + L
Sbjct: 75 LECAYHGWRFDGDGRCTHVPYREGSLPGCRLRTYPVREHDGFVWLFAGDPGRAHAVEPLR 134
Query: 177 PPSGFEIHAEIVMELPI----EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
P ++ I PI + L++NL+D+ H H + W L K
Sbjct: 135 LPEWDHLNY-IASVAPIACAAHYSYLIENLMDMHHG---HLHERFQAWGAAHLEKL 186
>gi|423095041|ref|ZP_17082837.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886188|gb|EJL02671.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 265
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ +++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGSEVKVGALFQRTLLNEPVVFFRDSHGAAQAIADRCPHRFAPLGMGVLKG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 171
++CPYHG E+ G C P R K+K+ P E+ ++WIW GD
Sbjct: 64 DAVRCPYHGLEFDGSGSCVHYPHGDGAIPRAAKVKAYPLVERYSLLWIWMGDMSLADATL 123
Query: 172 IPCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
IP G + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFSCMDGDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|390570113|ref|ZP_10250385.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|420250160|ref|ZP_14753385.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|389938000|gb|EIM99856.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|398062256|gb|EJL54036.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 374
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S ++K EP V+ R + G +++ CAHR PL G V+
Sbjct: 31 DHWYPLAWSREVKRGKTHAVRFAGEPIVLARSESGKVFALEDRCAHRQVPLSGGVVDGEA 90
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
I+C YHGW Y GKC +P + +++ PC E EG+I+++PGD T+P L
Sbjct: 91 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRAYPCREAEGLIFVFPGDAALAETMP--L 148
Query: 177 PPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
PP G E+ + + +NL+D+ H F H K
Sbjct: 149 PPLGSVADKAYKTRRFGREVACHYSFMHENLMDMNHQ-FLHRKQMGK 194
>gi|407941245|ref|YP_006856886.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. KKS102]
gi|407899039|gb|AFU48248.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. KKS102]
Length = 351
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 132/340 (38%), Gaps = 39/340 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +R + + C HR PL LG+V EG
Sbjct: 4 KNAWYVACTPDEIADKPLGRTICGEK-IVFYRPAPDQVAALDDFCPHRGAPLSLGTVCEG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
+QC YHG GK MP +++ K +S P E+ G IW+WPGD ATI
Sbjct: 63 HLQCGYHGLRVECTGKSVSMPGQRVQGFPKARSFPVVERYGFIWVWPGDADKADPATIHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
L + E + + + ++ L++DNL+DL H + H
Sbjct: 123 LPWANNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHSTSIGQKEIDEVPCKTRVEGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F +G P K +GL D +D F PP VL +G++ G
Sbjct: 183 EVITSRFMEGIEAPPFWKMALRMNGLP---DDQLVDRWQICHFTPPSHVLIEVGVALAGH 239
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ P + + M+ +F P + R ++
Sbjct: 240 GGYNAPADKKASSIVVDFITPETETSIHYFWGMARNFKP---QDPSLTTQIRDGQGKIFA 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
ED +++ QQE + + L + D GV+ R D L
Sbjct: 297 EDQQMLELQQENLLRYPDRKLLMLNIDAGGVQSRKILDRL 336
>gi|456357222|dbj|BAM91667.1| vanillate O-demethylase oxygenase, iron-sulfur subunit, vanA-like
protein [Agromonas oligotrophica S58]
Length = 347
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 132/335 (39%), Gaps = 49/335 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGTVAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +++ G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFNPQGRCTFMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 218
P G IH + ++ L++DNL+DL H F H S+
Sbjct: 125 PDMHWNHDPAWAGDGKTIH------VNCDYRLVVDNLMDLTHETFVHGSSIGNEALTEAP 178
Query: 219 -----GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
G ++ + F G +G D + I + F PC V +G++ G
Sbjct: 179 FDVTHGERTATVTRWMHGIEPPPFWARQLGKEGLVDRWQI-IRFEAPCTVTIDVGVAPTG 237
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ R + L+ P + + + + ++ + + R +
Sbjct: 238 TGAPEGDRSQGVNGMVLNTITPETERTCHYFWAFARNYQISEQR---LTTEIREGVSGIF 294
Query: 325 NEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVR 357
ED ++ QQ M N G +NL + + R
Sbjct: 295 REDELILEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille]
gi|151282074|gb|ABR90484.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 354
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 148/367 (40%), Gaps = 69/367 (18%)
Query: 38 KLPRKSLNVSGPVQPYN----TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG 93
+L + ++GP P N L+ FW PVA++++L D T + ++ V+ R +G
Sbjct: 3 ELSNIGVTMTGPHDPANHPLYRALRRFWHPVAYASELGD-TPLAVTLLDQSLVLAR-LNG 60
Query: 94 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKS 149
+ + + C H+ L LG + +G I+CPYHGW Y GKC ++P+ + + +
Sbjct: 61 VVTALDSRCPHKGTSLALGQIVDGTIECPYHGWRYDDGGKCVRVPAREELCDVLKASVAK 120
Query: 150 LPCFEQEGMIWIWPGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 207
E G+IW+ E P P + + + + L+N +D AH
Sbjct: 121 YHAAEHVGIIWV--ALEEPLYAFPDFPEFEDAEYNVLQGTSYDWATSSPRRLENFVDFAH 178
Query: 208 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG--- 264
F H T S P + P+D+ P + + G+ +PG
Sbjct: 179 FSFVHDGTIGSR-SNPRV----------------EPVDVWREGPVLRFNRSGVKEPGVGL 221
Query: 265 --KLEGQNTRQCATHLHQLHVCLPS-----------------------SRKKTRLLYRMS 299
+L G T +++ HV +P + +TR + ++
Sbjct: 222 KKELLGI-TDALIEPVNEYHVTMPHTVHLKRIFPNGKRYVLFMSASPVTATQTRSFWWIA 280
Query: 300 LDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN----VWNLPV-GYDKL 354
DF + KH F +R F ++VL +D ++ Q+ N A P+ G D +
Sbjct: 281 RDFGTDTKHDAF----FRDFEDEVLGQDKPIIESQRPLWFNLAGGDPAQRETPMRGADVV 336
Query: 355 GVRYRLW 361
+ YR W
Sbjct: 337 TIEYRRW 343
>gi|399078102|ref|ZP_10752702.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034040|gb|EJL27317.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 362
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 26 STSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPW 85
S S++ +D + R ++G P+ T N W+ FS + + P
Sbjct: 3 SVSQKMIDASQ----RAQKRLAGRDTPFVT---NCWYVAGFSWEFSR-ALRARTILGRPL 54
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 143
V++R P + + C HR+ PL +++ I C YHG Y DG+C + P+ Q R
Sbjct: 55 VLYRTAADRPVALSDRCVHRSYPLSASTLDGDTIVCGYHGLRYDADGQCVEAPALQTCPR 114
Query: 144 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC-------LLPPSGFEIHAEIVMELPIEHG 196
V ++S P EQ ++WIW G+ P +P P S H LP +
Sbjct: 115 GVGVRSYPVREQGPLVWIWMGEAPADEALPIGDWVSDPAWPASQQSYH------LPASYI 168
Query: 197 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS 256
L +NLLDL H F H ++F P PY +D+E P VL+
Sbjct: 169 ALHENLLDLTHLSFLHANSFG----TPDFAS------------APYEVDLESTPGRFVLT 212
>gi|111220909|ref|YP_711703.1| oxidoreductase [Frankia alni ACN14a]
gi|111148441|emb|CAJ60112.1| putative oxidoreductase, Rieske [2Fe-2S] region [Frankia alni
ACN14a]
Length = 383
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 125/322 (38%), Gaps = 65/322 (20%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L++ W PVA S ++ D+ V EPWV+ R DG+ + C HR PL G
Sbjct: 9 TTALRHGWHPVARSEEVADEP-VTVRLLGEPWVLARLDDGL-AAFADRCPHRLAPLSAGR 66
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 167
V+ + C YHGW + G+C +P+ R E+ G+IWI P +EP
Sbjct: 67 VDARELVCGYHGWRFVASGECTAVPALGPGVPPPRRARAAPPWGVVERHGLIWIAP-EEP 125
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEH----GLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
T I P E + V P GLL DN LD AH PF H T G +
Sbjct: 126 FTDLIEI---PEADEPGFDSVWLEPSRSSACAGLLADNFLDTAHFPFVHAGTIGAGEATV 182
Query: 224 SLVKFLTP---------------------ASG----LQGYWDPYPIDMEFRPPCMVLSTI 258
+TP A+G +Q W Y +RPP M+ +
Sbjct: 183 VAPYRVTPDGDGFVVQMEQRVANPEDPKVATGEHPLVQRRWSTY----VYRPPFMLRLRL 238
Query: 259 GISKPGKLEGQNTRQCATHLHQLHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 317
G ++ + CL P TR+ R+ D + M R
Sbjct: 239 DYPDAGM------------INTIQFCLQPEDAGSTRIYTRLLRD--DLGGDAALMAEAAR 284
Query: 318 HFAEQVLNEDLRLVLGQQERMN 339
F + VL+EDL L QER +
Sbjct: 285 -FEQAVLDEDLAL----QERFD 301
>gi|410461849|ref|ZP_11315486.1| Rieske (2Fe-2S) domain-containing protein [Bacillus azotoformans
LMG 9581]
gi|409925107|gb|EKN62336.1| Rieske (2Fe-2S) domain-containing protein [Bacillus azotoformans
LMG 9581]
Length = 429
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-VPFDCFEEPWVIFRGKDGIPGCVQNTC 102
L +GP P + +W P S +LK D E + FR +G G ++ C
Sbjct: 10 LTRTGPGTPMGDLFRLYWIPALKSDELKSDGKPQKIKLLSEDLIAFRDTEGKVGLMEEAC 69
Query: 103 AHRACPLHLGSVNEG-RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQE 156
HR ++ G +NEG ++C YHGW+++T+G C ++PS + + +KIKS P E +
Sbjct: 70 PHRGTSMYYG-INEGCGLRCMYHGWKFNTNGDCTEIPSEEGDPKFRQKIKIKSYPVKEVK 128
Query: 157 GMIWIWPGDEPPTATIPCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
GMIW + G E P P + + + E + +++N LD HA F H
Sbjct: 129 GMIWTYMGPEEKMPEFPEFYWMGLPDDYVMSERVWQEC--NYAQVMENDLDYVHAAFLHK 186
Query: 214 ST 215
+
Sbjct: 187 AN 188
>gi|410665771|ref|YP_006918142.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
gi|409028128|gb|AFV00413.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
Length = 341
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+PVA + +L D + P VIFR + P + + C HR PL G +G+IQ
Sbjct: 11 WWPVAVARELSADRPMRRQLNGLPLVIFRTNELKPAALVDACPHRMAPLSQGQCTQGQIQ 70
Query: 121 CPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
CPYHGW + G+C ++P Q R +++L C E G+IW+ A P
Sbjct: 71 CPYHGWTFDGQGRCVRIPGMQDAHALSRRPLVRALGCVESAGLIWV-----QTEAGAPLN 125
Query: 176 LPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
LP + + M+ ++ LL +N L+ H F H + + L P
Sbjct: 126 LPDESNGVD-QFFMQSTVDATLLDIAENFLEAFHTHFVHRGLVRRDTQRQQVDALLRPID 184
Query: 234 G 234
G
Sbjct: 185 G 185
>gi|407697722|ref|YP_006822510.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
gi|407255060|gb|AFT72167.1| Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
Length = 330
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ FW+PV ++LK F+ + +F DG+P +++ C HR L LG V +
Sbjct: 9 FRRFWYPVMPMSELKQRPQ-RFELLGQALALFLDDDGVPAALEDRCCHRTARLSLGEVCD 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATI 172
I CPYHGW Y+ +G+C +P R+ ++K+ C E+ G W+ E P I
Sbjct: 68 NAIACPYHGWRYNREGQCVLVPQMPDRDPGPKRRVKAFSCREKYGYAWV--ALEQPLFDI 125
Query: 173 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P F + E E + +++N LD+AH + H TF
Sbjct: 126 PDFPEAADDSFVLIHEFYEEWRVSGLRVMENELDMAHPSYVHLGTFG 172
>gi|443326458|ref|ZP_21055111.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442793912|gb|ELS03346.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 435
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 41/329 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE--G 117
W+P+ D+ +P P VI++ + C HR PL G +++
Sbjct: 10 WYPLVPIEDINPQKPLPATLLGIPLVIWKPSSSQTYQVFLDRCPHRLAPLSEGRIDDKTD 69
Query: 118 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 169
+ C YHGW++ T G C ++P + + +N PC ++ ++W+W P
Sbjct: 70 NLMCSYHGWQFETKGNCTRIPQADNPELIAKKSQNFCATVFPCRQENDLLWVWMDASSPE 129
Query: 170 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 219
LP S GF + + +V +L + L++N+ D +H PF H +
Sbjct: 130 IAAITALPLSPQIDASKGF-VWSSMVRDLEYDWQTLVENVADPSHVPFAHHGIQGNRDRA 188
Query: 220 WSVPSLVKFLTPASGLQGYWD-PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
+P L + ++ D P+ + F PPC + + K G T
Sbjct: 189 HPIP-LDIIRSEIDLIEAKVDKPFKTTITFEPPCRLEYALTFGDEIKKIGLIT------- 240
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-- 336
C+P S K+R++ + S +FA+ L + W H + L D +VL Q+
Sbjct: 241 ----YCIPVSPGKSRIVAQFSRNFATKLHKL--TPRWWDHIQNRNLILDGDMVLLHQQES 294
Query: 337 --RMNNGANVWNLPVGYDKLGVRYRLWRD 363
+ N + +P D+L + +R W D
Sbjct: 295 FLQHTNWKTAYKMPTSADRLVIEFRSWFD 323
>gi|398849503|ref|ZP_10606240.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250755|gb|EJN36056.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 370
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ + S+ L + + P + +V FR G + + C HR L G+
Sbjct: 2 LKNLWYVILPSSQLSQE-IAPIRLLGQSFVAFRDSHGKARLLSDICVHRGGSLSAGAKVG 60
Query: 117 GRIQCPYHGWEYSTDGKCEKMPST-QLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+QCPYHGW + DG+C ++P+ LR ++ + P E+ G IW + GD P
Sbjct: 61 DSVQCPYHGWRFDGDGRCVQIPAQPTLRIPEKARVDAYPTEERYGWIWAFLGDLPEAERP 120
Query: 173 PCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
P LP + A + + + +++N LD AHAPF H STF + P +
Sbjct: 121 P--LPALDWLDDANVRVVSGHFDWEASWDRVIENGLDFAHAPFVHGSTFGDP-AHPEIEA 177
Query: 228 FLTPASGLQG 237
F + QG
Sbjct: 178 FDVDSDAWQG 187
>gi|87199507|ref|YP_496764.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135188|gb|ABD25930.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 351
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 54 NTR---LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 110
NTR ++N W+ + + P EP V +R DG + + C HR PL
Sbjct: 3 NTRPNFVRNCWYVAGWDYEFTAGKPHPRTFLAEPVVFYRKGDGTLVAMADRCVHRLAPLS 62
Query: 111 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPP 168
LG + I+C YHG ++ DGKC ++P + + I++ P E+ WIW GD P
Sbjct: 63 LGRLEGDDIRCMYHGMRFTADGKCVEIPGQDMIPSSACIQTYPVVEKGSWAWIWMGD--P 120
Query: 169 TATIPCLLPPS-GFEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
LLP + G + ++ ++ H L+ DNLLDL+H + H ++F GW
Sbjct: 121 HLADAALLPDARGLDDPVWVLKSGQLDYAAPHELINDNLLDLSHLAYVHVASFGATPGW 179
>gi|299532713|ref|ZP_07046101.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719348|gb|EFI60317.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 359
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 51 QPYNTRLKNF----WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
QP + L F W+ F+ +LKD V +P V+FR +DG +++ C HR
Sbjct: 6 QPMSAALTAFPLDQWYVAGFAWELKDQP-VARTLLGQPVVLFRTEDGRVAALEDRCCHRE 64
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPG 164
PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WIW G
Sbjct: 65 LPLSCGTVEAAGLRCGYHGLLFSHEGRCLEIPGQERIPAKACVKSFELRERDQILWIWMG 124
Query: 165 DEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P ++P PP+ + +H++ V + L+ DNLLDL+H + H T
Sbjct: 125 ATPD--SVPDTEPPA-YAVHSDPKYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIG 181
>gi|302543069|ref|ZP_07295411.1| oxidoreductase alpha subunit [Streptomyces hygroscopicus ATCC
53653]
gi|302460687|gb|EFL23780.1| oxidoreductase alpha subunit [Streptomyces himastatinicus ATCC
53653]
Length = 367
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 43/347 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK------DGIPGCVQNTCAHRACPLHL 111
+N W+ A+ ++ + ++ EP +R + G + + C HR PL
Sbjct: 6 RNQWYVAAYGREVGRE-LLARTILNEPIAFYRTEPNSDEPTGTVVALADRCVHRRYPLSA 64
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
++ + C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD P
Sbjct: 65 SRLDGDNVVCGYHGFTYDTSGTCVFVPGQKRVPRTARVASYPVVEQDSLVWVWIGD--PA 122
Query: 170 ATIPCLLPPSGFEIH---AEIVMELPIE--HGLLLDNLLDLAHAPFTH------------ 212
P +P + + + PI+ +GLL+DNL+DL+H + H
Sbjct: 123 LADPAAIPRAPWLADPGWTTVGGMEPIDAGYGLLVDNLMDLSHETYLHGGYIGTPEVAET 182
Query: 213 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIA 241
Query: 262 KPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV-PFMQYLWRHF 319
G L E + A H+ + PS+ + + +S DFA V F+ R
Sbjct: 242 PAGVLPEADGSDPNAFHVEITYAITPSTDQTVYDFWAVSRDFAQDDDEVTTFLHDFNRTV 301
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 366
Q ++ L L+ + G ++ + L R L R A E
Sbjct: 302 VRQDVDA-LNLLQKALDTEREGYQELSINIDTGGLAARRILARLAAE 347
>gi|257056591|ref|YP_003134423.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
gi|256586463|gb|ACU97596.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
Length = 377
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 57/324 (17%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ A+ ++ D + P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDYEVTDKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKIIGD 85
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QCPYHG +++ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 86 ELQCPYHGLRFNSAGRCTAMPAQETLNPSALVPSYPVVERYRYVWVWVGD--PNLADPNT 143
Query: 176 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 218
+P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 144 VPDMHQMDDPAWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHSSSIGQEELSEA 197
Query: 219 -------GWSVPS---LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 259
G +V ++ P L+ D +P +D ++F P + +G
Sbjct: 198 DFDVVHEGNTVTVTRWMLNVDAPPFWLRNMRDKFPGFEGKVDRWQIIKFEAPSTIRIDVG 257
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYL 315
++K G + R + + ++ P + + + LD ++ +
Sbjct: 258 VAKAGTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYRLDSQTITTRL------ 311
Query: 316 WRHFAEQVLNEDLRLVLGQQERMN 339
R V ED ++ QQ ++
Sbjct: 312 -RQSVSGVFAEDEDMLRAQQRAID 334
>gi|158333261|ref|YP_001514433.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158303502|gb|ABW25119.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 467
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 145/349 (41%), Gaps = 38/349 (10%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHR 105
+G P + W+P+A+ DL + + F + VI+ + V + C HR
Sbjct: 15 AGGDDPNRFDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHR 74
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-STQLRNVK------IKSLPCFEQEG 157
L G ++E G I+CPYHGW +S G+CE++P R+ + + SLP Q+G
Sbjct: 75 LARLSEGRIDEDGLIECPYHGWAFSGTGECERIPQQVSGRSAESSPRACVDSLPISIQQG 134
Query: 158 MIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTH 212
+++ + G A P ++ P I++ +LP + LL+N+LD +H P+TH
Sbjct: 135 LLFAYAGQPERAALTPVPIVGPIEESPDDWIILDGFRDLPYDVLTLLENVLDPSHLPYTH 194
Query: 213 TSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
+ S V+ SG QG+ W+ P R + T PG +
Sbjct: 195 HRSVGNR-SNAGPVELEVMESGKQGFYGVWEEGP-----RQGKLGTQTTTFVAPGLMWHD 248
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVL 324
T + P + + R+ R F+S ++ H P + H + +
Sbjct: 249 LTSSQFGRTLTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTP---TWFSHLGQNAI 305
Query: 325 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALE 366
ED ++ L QER + A + LP D+ + W++ +
Sbjct: 306 LEDDQIFLHFQERYLERTKDSKSIAQAFYLPTRADRFVLALHQWQERFQ 354
>gi|295699780|ref|YP_003607673.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438993|gb|ADG18162.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 131/342 (38%), Gaps = 55/342 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A+S ++ DD + P +++R DG +Q+ C HR PL +G
Sbjct: 3 IRNTWYVAAWSHEVTDDALFSRTIIGTPVLLYRTTDGQLVALQDRCCHRGAPLSVGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHG ++ G C + P+ Q R ++S P E+ IWIW GD P P
Sbjct: 63 DCVRCLYHGLKFDARGTCVEAPA-QPRIPPKATVRSYPVVERHRWIWIWMGD--PMLADP 119
Query: 174 CLLPPSGF-----------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA----- 217
+P + + IH + + + L+ DNLLD +H PF H T
Sbjct: 120 ATIPDTHWLDDPAWRCLPGYIHYD------VNYLLICDNLLDFSHLPFVHPGTLGGPETY 173
Query: 218 ----------------KGWSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 257
W++ PS + G W+ Y +F P ++L
Sbjct: 174 ADVRPTVERLDNGVRISRWTMDTQAPSFAAAVKHWPGNVDRWNLY----DFTIPGILLMD 229
Query: 258 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 317
G++ G + R A P + T + +FA ++ Q +
Sbjct: 230 SGMAPVGTGAREGKRVDAAEFRSCQALTPETETSTHYFFAQPHNFA--IEQPEVTQSIHE 287
Query: 318 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
E ED ++ Q+ ++ + + G D ++R
Sbjct: 288 AIVE-AFAEDRAIITAQRRNLSLDPDFKMMAFGIDSALSQFR 328
>gi|357032542|ref|ZP_09094477.1| putative ferredoxin subunit of ring-hydroxylating dioxygenase
[Gluconobacter morbifer G707]
gi|356413533|gb|EHH67185.1| putative ferredoxin subunit of ring-hydroxylating dioxygenase
[Gluconobacter morbifer G707]
Length = 373
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S D+K V + P + R ++G +++ CAHR PL LG V+
Sbjct: 24 DYWYPIAWSKDVKRGKTVGRRFGKHPIALVRPEEGSVFALEDRCAHRQVPLSLGKVSGEA 83
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATIP 173
+QC YHGW Y G+C +P +L N +K+ PC E GMI+I+PGD + T +P
Sbjct: 84 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVKTYPCREVGGMIFIFPGDAEKAETTPLP 142
Query: 174 CLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L S + ++ + L +NL+D+ H F H +
Sbjct: 143 KLAQVSNPAFKTRLFSPQVKCHYTFLHENLMDMNHQ-FLHRRQMGQ 187
>gi|213966890|ref|ZP_03395040.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato T1]
gi|301381572|ref|ZP_07229990.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato Max13]
gi|302061672|ref|ZP_07253213.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato K40]
gi|302134357|ref|ZP_07260347.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213928212|gb|EEB61757.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato T1]
Length = 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAIERYGFIWVWPGEREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFKPADEQ---LTATIREGQH 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQLNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|384921320|ref|ZP_10021304.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
gi|384464805|gb|EIE49366.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
Length = 356
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A+ST++ DD + F + V+FR DG +++ C HR PL G
Sbjct: 5 VRNAWYVAAWSTEI-DDELRRFTILGDHVVMFRKTDGTVAALEDRCPHRLLPLSRGKRVG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGD----EPPTA 170
+QC YHG + G C ++P T L ++ ++ + P E G++WIW GD +P T
Sbjct: 64 DTVQCGYHGLTFDCSGACVRVPGQTNLPKSARVDAFPIVENHGIVWIWMGDPTRADPETV 123
Query: 171 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
+P P+ + +H + L + + +NL+D AH F H +T S
Sbjct: 124 FDMPEFSDPN-WAVHHGDALHLESHYLNVAENLVDPAHVSFVHPTTLGNAAS 174
>gi|428316589|ref|YP_007114471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428240269|gb|AFZ06055.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 356
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 47 SGPVQPYNTRLKNF------WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 100
SG V+ T ++ W+ +A ST++++ + + V+FR G +++
Sbjct: 8 SGSVRGQKTHIRQLGINLDRWYAIARSTEVQNQPLAA-KIWNRAIVLFRDSSGKINALED 66
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQE 156
C HR L G V I+C YHGW + G+C ++ + +L N KI+S P E+
Sbjct: 67 RCPHRQVKLSHGQVKGDLIECAYHGWRLNARGECAEVDYLAENQKLPNCKIRSYPVKEKN 126
Query: 157 GMIWIWPGDEPPTATIPCLLPPSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
G IW++PGDE I LL S +E I V++ + L++NL+D+ H H
Sbjct: 127 GFIWLFPGDETQAEKID-LLDLSEWEHLNYIATVSVIDCQAHYSFLIENLMDMYHG---H 182
Query: 213 TSTFAKGWSVPSL 225
+ W+ P L
Sbjct: 183 LHDDWQAWANPVL 195
>gi|428208093|ref|YP_007092446.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
gi|428010014|gb|AFY88577.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
Length = 474
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 33/343 (9%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAH 104
++G P + W+PV + DL PF + I+ + V ++ C H
Sbjct: 18 LAGGTDPAFFDCQEVWYPVHYVQDLDKSKPTPFTLLGQDIAIWWEQQAECWRVFEDKCPH 77
Query: 105 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCF-EQ 155
R PL G + E G ++CPYHGW ++ G C+++P ++SLP +
Sbjct: 78 RLAPLSQGRIAEDGLLECPYHGWAFAGAGDCQRIPQQVAGQAAVTSPRACVRSLPTIVVK 137
Query: 156 EGMIWIWPGD-EPPTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPF 210
+G+++++PG E T T ++ P + + + +LP + L++N+LD +H PF
Sbjct: 138 QGLLFVYPGKAENATKTKVPVIEPLEESLEGWVCIDTFRDLPYDALTLMENVLDASHVPF 197
Query: 211 THTSTFAKGWSVPSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-E 267
TH + + S+ + + G G W P R + PG +
Sbjct: 198 THHRSVGNRANASSVELEVVESGKHGFTGVWQEGP-----RRGTLGRQDTTFVAPGLMWH 252
Query: 268 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLN 325
++Q L ++ P + + RL R FAS L + + H + +
Sbjct: 253 DLTSKQFGRTLTAVYAT-PIRKGECRLFARFPFKFASKLPGWIIKLTPRWYSHLGQNSVL 311
Query: 326 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
ED ++ L QER N + LP D V R W
Sbjct: 312 EDDQIFLHYQERYLEAGGGSGNFTKAFYLPTQADAFVVELRQW 354
>gi|28870083|ref|NP_792702.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|422656822|ref|ZP_16719266.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
gi|28853329|gb|AAO56397.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|331015362|gb|EGH95418.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
Length = 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAIERYGFIWVWPGEREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFKPADEQ---LTATIREGQH 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQLNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|415908364|ref|ZP_11552965.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
gi|407762803|gb|EKF71586.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
Length = 349
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIASKPLGRQICGEKI-VFYRGAEGQVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG E DGK MP ++R I+S E+ G IW+WPG++ P L+
Sbjct: 63 QLVCGYHGLEMGCDGKPVSMPGQRVRGFPCIRSFAVVERYGFIWVWPGEK--ELADPALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 212
+ + E + + ++ L++DNL+DL H + H
Sbjct: 121 HHLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVE 180
Query: 213 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 263
TS + + P + +GL D P+D F PP V+ +G++
Sbjct: 181 GEQVITSRYMENIMAPPFWRMALRGNGLA---DDVPVDRWQVCRFTPPSHVMIEVGVAHA 237
Query: 264 G 264
G
Sbjct: 238 G 238
>gi|418516298|ref|ZP_13082473.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707099|gb|EKQ65554.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 358
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLCGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+ V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRSVVVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRAGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|264680321|ref|YP_003280231.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
gi|262210837|gb|ACY34935.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
Length = 359
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 51 QPYNTRLKNF----WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
QP + L F W+ F+ +LKD V +P V+FR +DG +++ C HR
Sbjct: 6 QPTSAALPAFPLDQWYVAGFAWELKDQP-VARTLLGQPVVLFRTEDGRVAALEDRCCHRE 64
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPG 164
PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WIW G
Sbjct: 65 LPLSCGTVEAAGLRCGYHGLLFSHEGRCLEIPGQERIPAKACVKSFELRERDQILWIWMG 124
Query: 165 DEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P ++P PP+ + +H++ V + L+ DNLLDL+H + H T
Sbjct: 125 ATPD--SVPGTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIG 181
>gi|399077235|ref|ZP_10752329.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398035712|gb|EJL28944.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 371
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 36/180 (20%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--- 115
+ W+ S DLK M + EP +I R K G +++ C HRA L G
Sbjct: 28 DAWYMACLSPDLKPGKMESREFLGEPVLIGRTKAGAVYALRDVCPHRAANLSAGKTRTEA 87
Query: 116 EGR--IQCPYHGWEYSTDGKCEKMPSTQLRN------VKIKSLPCFEQEGMIWIWPGDEP 167
+GR ++CPYHGW + TDG C K+PS N V+++ P E +G++WIW +P
Sbjct: 88 DGRETVECPYHGWRFHTDGGCAKIPSLTADNPLDISKVRVRKYPLVESQGLVWIWMSGDP 147
Query: 168 ---------------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
P L+ ++IH I+H +L L+D AH PF H
Sbjct: 148 RFDGQPPAPPPVIPGVVGGKPKLVDRLDYDIH--------IDHAVL--GLIDPAHGPFVH 197
>gi|289661877|ref|ZP_06483458.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289669971|ref|ZP_06491046.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 350
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGSGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDAEIQIPPMPGWDEEGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPEVAPDFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|83955042|ref|ZP_00963698.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83840371|gb|EAP79544.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 355
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 37/267 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ +STD D+ +VP + V +R DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDE-LVPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTA 170
IQC YHG + DG C ++P S ++ + S P E+ +++IW GD +P A
Sbjct: 63 DTIQCGYHGMTFGADGACVRVPGQSNLPKSAYVDSYPVLERHDIVFIWMGDADKADPALA 122
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK- 227
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 123 FDLPELGQEGWHVHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVKT 182
Query: 228 ------------------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
F G G W Y + M P + G S KL
Sbjct: 183 ADEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHYYYLHM----PSTAVIDFG-SSDAKL 237
Query: 267 E-GQNTRQCATHLHQLHVCLPSSRKKT 292
E ++ R + LH P + T
Sbjct: 238 ELPEDQRNKGVRIFALHFVTPVTEDYT 264
>gi|410090976|ref|ZP_11287555.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
gi|409761697|gb|EKN46751.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
Length = 354
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 43/336 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R +D +++ C HR PL LG V G
Sbjct: 4 KNTWY-VACAADEVTDKPLGRQICNEKMVFYRDQDQQIVALEDFCPHRGAPLSLGFVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPG--DEPPTATIPC 174
++ C YHG DG+ MP ++R K+ E+ G IW+WPG D A IP
Sbjct: 63 QLVCGYHGLVMGGDGQTVAMPGQRVRGFPCNKTFAAIERYGFIWVWPGERDRADAALIPH 122
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 233
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAVSDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVT 177
Query: 234 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 263
++G +W D P+D F PP V +G++
Sbjct: 178 TVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVHIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
GK R+ + P + + M+ +F + R ++
Sbjct: 238 GKGGYNAPREFKASSIVVDFITPETDTSIWYFWGMARNFNP---QDEALTASIREGQGKI 294
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
EDL ++ QQ+ + + L + D GV+ R
Sbjct: 295 FTEDLEMLERQQQNLLQHPHRKLLKLNIDAGGVQSR 330
>gi|359462313|ref|ZP_09250876.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 488
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 144/349 (41%), Gaps = 38/349 (10%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHR 105
+G P + W+P+A+ DL + + F + VI+ + V + C HR
Sbjct: 36 AGGNDPNRFDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHR 95
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-STQLRNVK------IKSLPCFEQEG 157
L G ++E G I+CPYHGW +S G CE++P R+ + + SLP Q+G
Sbjct: 96 LARLSEGRIDEDGLIECPYHGWAFSGTGDCERIPQQVSGRSAESSPRACVDSLPISIQQG 155
Query: 158 MIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTH 212
+++ + G A P ++ P I++ +LP + LL+N+LD +H P+TH
Sbjct: 156 LLFAYAGQPERAALTPVPIVGPIEESPDDWIILDGFRDLPYDVLTLLENVLDPSHLPYTH 215
Query: 213 TSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
+ S V+ SG QG+ W+ P R + T PG +
Sbjct: 216 HRSVGNR-SNAGPVELEVMESGKQGFYGVWEEGP-----RQGKLGTQTTTFVAPGLMWHD 269
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVL 324
T + P + + R+ R F+S ++ H P + H + +
Sbjct: 270 LTSSQFGRTLTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTP---TWFSHLGQNAI 326
Query: 325 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALE 366
ED ++ L QER + A + LP D+ + W++ +
Sbjct: 327 LEDDQIFLHFQERYLERTKDSKSIAQAFYLPTRADRFVLALHQWQERFQ 375
>gi|134099364|ref|YP_001105025.1| oxidoreductase subunit alpha [Saccharopolyspora erythraea NRRL
2338]
gi|291007249|ref|ZP_06565222.1| oxidoreductase alpha subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133911987|emb|CAM02100.1| oxidoreductase alpha subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 354
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 136/359 (37%), Gaps = 54/359 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG--SVN 115
+N W+ A+ T++ D C EP + +R + G + C HR PL +
Sbjct: 6 RNQWYVAAYGTEIGRDLFARTIC-GEPILFWRTESGTVTANSDRCVHRRFPLSQAPSRLV 64
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++ C YHG+ Y DGKC +P R ++ P EQ+ +W+W GD P P
Sbjct: 65 GDQVVCGYHGFTYGPDGKCVAVPGQARVPRTARLTPYPVVEQDSFVWVWIGD--PALADP 122
Query: 174 CLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK- 227
+P + + A+ +E LL+DNLLDL+H + H + +
Sbjct: 123 ARIPRAPYLDSADYTTVCGLEPLRARFSLLVDNLLDLSHETYLHGGYIGTPEVADTPIST 182
Query: 228 ----------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
F ++GL G + D+E+ PPC+ I+ G
Sbjct: 183 EVDDDAGIVYVSRHMDDAECPPFYAKSTGLAGRISRWQ-DIEYTPPCLYKLHSRIAPVGS 241
Query: 266 LEG-QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ T A H+ ++ P + T + ++ DFA L H + L
Sbjct: 242 VPNPDGTDPDAFHVEVVYAITPETEHSTHDFWAVARDFA-----------LDDHEVSEFL 290
Query: 325 NEDLRLVLGQQERMNNGAN--VWNLPVGYDKLGVRYRL----WRDALEKGAKQLPFMKP 377
E+ R V+ Q N V P GY +L + R L + A Q P P
Sbjct: 291 AENNRTVVLQDVEALNVLEQVVQTEPPGYQELSINIDTGGLAARRMLARMAGQTPRNAP 349
>gi|359780082|ref|ZP_09283308.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
gi|359371394|gb|EHK71959.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
Length = 352
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 54/360 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + EP V +R G +++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEVQDKPLGRQICGEPLVFYRDAKGQVVALEDFCPHRGAPLSLGFVRDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG E GK MP ++ ++ E+ G +W+WPGD+ P L+
Sbjct: 63 TLVCGYHGLEMGCGGKTLGMPGQRVGVFPAVRPYAAVERHGFVWVWPGDQ--AKADPTLI 120
Query: 177 P-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 218
P S + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAESPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPATRVE 180
Query: 219 -----------GWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 263
S P + +GL D P+D F PP V+ +G++
Sbjct: 181 GDEVITSRHMENISAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRHF 319
G + P + + M+ +F A + + R
Sbjct: 238 GHGGYDAPAAVKAASVVVDFITPETETSIWYFWGMARNFKPDDAELTASI-------REG 290
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQLPFMK 376
++ EDL ++ QQ+ + L + D GV+ R D A E+ A +P +
Sbjct: 291 QGKIFGEDLEMLERQQQNLLRYPERGLLKLNIDAGGVQSRQIIDRLLAAEQAATGIPVRQ 350
>gi|340786276|ref|YP_004751741.1| Rieske (2Fe-2S) domain-containing protein [Collimonas fungivorans
Ter331]
gi|340551543|gb|AEK60918.1| Rieske (2Fe-2S) domain protein [Collimonas fungivorans Ter331]
Length = 344
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
++N W+ A S ++K + PF E V++R +++ CAHR PL G +
Sbjct: 3 IQNAWYAAALSGEIKSE---PFARTILNEKIVMYRTSANQVVALEDRCAHRQVPLSRGRL 59
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPTA 170
+QC YHG Y G+C +P ST + +++S P E+ G +W+WPG D+ +
Sbjct: 60 IGDELQCWYHGLRYDCSGECVNIPSQSTIPKGARVRSFPAVEKHGFVWLWPGDPDQADES 119
Query: 171 TIPCLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
IP S E+ + + + +DN+LD++HA F H T
Sbjct: 120 AIPNHWVCSAPELAGTMSYCTIACNYVFGIDNILDISHAAFVHAKTLGS 168
>gi|254414093|ref|ZP_05027861.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179229|gb|EDX74225.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 371
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 134/340 (39%), Gaps = 53/340 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKNFW+ FS+ + + +V++R G + + C HR L LG V+
Sbjct: 2 LKNFWYACEFSSAITQKPKQIL-MLNQRFVLYRNTHGQVVALNDQCPHRGAALSLGWVDN 60
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD-----E 166
++CPYHGW++ DGKC +P+ + ++ S P E+ G +W++ GD
Sbjct: 61 NCLRCPYHGWKFQADGKCIDIPANAPEMPIPKKARVDSYPVQEKYGFVWLFYGDLPPEKR 120
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------- 218
PP T+P + + + E + +++ +D AH H +F +
Sbjct: 121 PPLPTLPDFIFANLHPVEYECTEN--AHYARIMEINMDFAHVIAVHKQSFGQRIPLHKTI 178
Query: 219 -------GWSVPSLVKFLTPASG------LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 265
WS + V + + + L G + F P + LS I I + G
Sbjct: 179 EYQVEEDAWSGVATVNYESLGNSKSVLNFLLGGRPQLTTRLSFFLPNVTLSEISIGRGGS 238
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKT---RLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
+ L L LP + T R+ YR L F P++ L+R +
Sbjct: 239 FD--------IKLIVLIAHLPIDEETTVVKRIFYRNFLRF-------PWLDGLFRKLDSK 283
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWR 362
+ ED +V + + L V D LG+ YR R
Sbjct: 284 LTEEDAVIVTSLSPKSMPKLSE-ELHVAADALGLAYRKLR 322
>gi|311106169|ref|YP_003979022.1| rieske [2Fe-2S] domain-containing protein 5 [Achromobacter
xylosoxidans A8]
gi|310760858|gb|ADP16307.1| rieske [2Fe-2S] domain protein 5 [Achromobacter xylosoxidans A8]
Length = 356
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 131/336 (38%), Gaps = 43/336 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ A+ ++ + + P +++R G +++ C HR PL +G
Sbjct: 3 IKNTWYVAAWDQEVGANGLFSRTIIGVPVLMYRDAAGRLVALEDRCCHRGAPLSVGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHG ++ G C + P+ Q R ++++ P E+ IWIW GD P P
Sbjct: 63 DCVRCMYHGLKFDPTGACVEAPA-QARIPPQARVRTFPVVERHRWIWIWMGD--PERADP 119
Query: 174 CLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 219
L+P + + H + + + + L+ DNLLD +H PF H +T
Sbjct: 120 ALIPDTQWLDHPDWRSLDGYIHYDVNYLLIADNLLDFSHLPFVHPTTLGGSEDYAAVSPK 179
Query: 220 ------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 263
W++ P + + GL W+ Y F P ++L G++
Sbjct: 180 VDRLPDGVRITRWTLNTEAPPFARKVREWPGLVDRWNIY----NFTLPGILLMDSGMAPA 235
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
G + R A P + T + +F+ P + +
Sbjct: 236 GNGAQEGNRAGAIEFRGCQALTPETATSTHYFFAHPHNFS---IDQPEVTASIHQSVVEA 292
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ED ++ QQ ++ + +P+ D ++R
Sbjct: 293 FDEDRDIITAQQRSLSLAPDFKMVPLSIDAALSQFR 328
>gi|297746464|emb|CBI16520.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 61 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
W+PVA DL D +V +D E W +F + CAHR PL
Sbjct: 128 WYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVF----------DDACAHRLAPL 177
Query: 110 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 160
G +++ GR+QC YHGW ++ G C+ +P + + P Q G++W
Sbjct: 178 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQHGIVW 237
Query: 161 IWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHT 213
WP +P I P +P + + + + P + +L++N++D AH + H
Sbjct: 238 FWPNTDPQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMDPAHVAYAHY 297
Query: 214 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM-EFRPPCMVLSTIGI----SKPGKLEG 268
+ P ++ S + G+ + +F PPC+ + + S G
Sbjct: 298 GIADREGGTP--IEISVKRSAIDGFDAERELARSKFIPPCLYYTCLDFPAYQSNESVSSG 355
Query: 269 QNTRQCATHLH-----QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
+ ++H+ + +C+P S +RL++ +F H+ +++ +
Sbjct: 356 LTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTDHI-IPRWMLHMSQNLI 414
Query: 324 LNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLW 361
L+ DL L+ L +++ M G + W+ +P D V +R W
Sbjct: 415 LDSDLYLLHLEERKIMKAGPSNWHKACFVPTKSDAHIVAFRAW 457
>gi|148554605|ref|YP_001262187.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499795|gb|ABQ68049.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 357
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 50 VQPYNTRL----KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
VQPY +N W+ AFS ++ + M + V +R + G P + + C HR
Sbjct: 6 VQPYYPGTLPAPRNAWYVCAFSDEVGERPM-SRRILGDRIVFYRTEAGDPVALADYCPHR 64
Query: 106 ACPLHLGSVNEG-RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIW 162
A L G EG RIQC YHG E+ DG C ++PS + R + +S P E+ IWIW
Sbjct: 65 AVALSHGKRVEGDRIQCIYHGMEFGPDGHCRRVPSQKAVPRAMATRSYPLAERWRWIWIW 124
Query: 163 PGDEPPTATIPCLLP---------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
GD P A L+P GF M++ LL +NLLD++H F H
Sbjct: 125 MGD--PDAADESLIPDHSTFGLGEDDGFYKIQRFRMDIGGSFQLLHENLLDVSHITFLHE 182
Query: 214 STFAKG 219
F G
Sbjct: 183 GMFDSG 188
>gi|325914417|ref|ZP_08176764.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
vesicatoria ATCC 35937]
gi|325539425|gb|EGD11074.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
vesicatoria ATCC 35937]
Length = 350
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ PF +EP V++R G++ + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVG---QAPFKATLLDEPLVLYRLGEELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPTQNIPAKMRLHTYAVAERYGLIWVCLAKPAD 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSEAEVQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPSFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|385674800|ref|ZP_10048728.1| oxidoreductase subunit alpha [Amycolatopsis sp. ATCC 39116]
Length = 348
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 35/278 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+++ W+ A+ +++ + ++ EP V +R + G + + C HR PL ++
Sbjct: 5 VRDQWYVAAYGSEVGRE-LLARTILGEPIVFYRTEAGEVVALADRCVHRRYPLSESRLDG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
RI C YHG+ Y G C +P R ++ S P EQ+ +W+W GD P
Sbjct: 64 DRIVCGYHGFTYEPSGSCVFVPGQSRIPRTARVPSYPVVEQDSFVWVWIGD--PARADAT 121
Query: 175 LLPPSGFEIHAEIV----ME-LPIEHGLLLDNLLDLAHAPFTH--------------TST 215
L+P + + ME L + LL+DNL+DL+H + H T+
Sbjct: 122 LIPRAPWLADPAYTTVCGMEPLAARYDLLVDNLMDLSHETYLHGGYIGTPEVANTPITTE 181
Query: 216 FAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
+ + + + F ++G+QG + D+E+ PPC+ L I+ G L
Sbjct: 182 VDEDRRIIYVSRHMDDAACPPFYAKSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPVGVL 240
Query: 267 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
T H+ ++ P + T + ++ DFA
Sbjct: 241 PNADGTDPEGFHVEVVYAITPETEHSTHDFWAVARDFA 278
>gi|333902226|ref|YP_004476099.1| vanillate monooxygenase [Pseudomonas fulva 12-X]
gi|333117491|gb|AEF24005.1| Vanillate monooxygenase [Pseudomonas fulva 12-X]
Length = 354
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 137/351 (39%), Gaps = 39/351 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + + C E+ V +RG +G +++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIAEKPLGRQICGEKI-VFYRGAEGQVVALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
+ C YHG E +GK MP ++R I++ E+ G IW+W GD+ ATI
Sbjct: 63 NLICGYHGLEMGCEGKTVSMPGQRVRGFPGIRAFAAVERYGFIWVWTGDQALADPATIHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK---- 227
L + + + + ++ L++DNL+DL H + H S+ + P + K
Sbjct: 123 LEWAENPDWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTKVEGD 182
Query: 228 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 268
F A G D P+D F PP V+ +G++ G
Sbjct: 183 EVITSRHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFNPPSHVMIEVGVAHAGHGGY 242
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLN 325
+ + + P S + M+ F P Q L R ++ +
Sbjct: 243 EAPAEVKASSIVVDFITPESETSIWYFWGMARSFK------PEDQALTDSIRQGQGKIFS 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 376
EDL ++ QQ + L + D GV+ R D L + L K
Sbjct: 297 EDLEMLERQQRNLLWQPERQLLKLNIDAGGVQSRRIIDRLLAEEQALAAQK 347
>gi|126731895|ref|ZP_01747699.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
gi|126707722|gb|EBA06784.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
Length = 356
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 129/329 (39%), Gaps = 30/329 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A+ST++ DD + F + V++R DG +++ C HR PL G
Sbjct: 5 IRNAWYVAAWSTEIDDD-LRRFTILGDHVVMYRKSDGGVVALEDRCPHRLLPLSKGKRVG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+QC YHG + G C ++P T L ++ +++ P E+ G++WIW GD T
Sbjct: 64 DNVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVEAFPTEERHGIVWIWMGDAARADTSKI 123
Query: 175 LLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
P G+++H + L + + +NL+D AH F H +T S V T
Sbjct: 124 FDMPEFTDPGWKVHHGDALHLRSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQT 183
Query: 231 PASGLQGY-W--DPYPIDME-----------------FRPPCMVLSTIGISKPGKLEGQN 270
+ + W D PI PC + G + + ++
Sbjct: 184 EGEAIVAWRWIRDAEPIGFFKGFGGFTGNVDRWHYYYLYTPCTAVIDFGSAPAEEAIAED 243
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + LH P + +T + R + + P + ED +
Sbjct: 244 ERDKGVRIFALHFITPVT--ETYSIDRW-MHIRNTALDDPEAETTMDKMFRTAFQEDKDI 300
Query: 331 VLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ QE N A + + DK + YR
Sbjct: 301 LEAVQEEENRPAKRRPIRIAIDKGPLVYR 329
>gi|402822359|ref|ZP_10871849.1| vanillate O-demethylase oxygenase subunit [Sphingomonas sp. LH128]
gi|402264108|gb|EJU13981.1| vanillate O-demethylase oxygenase subunit [Sphingomonas sp. LH128]
Length = 353
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 43/304 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L W+PVA + ++ + V ++P VI++ D + N C HR PL LG+
Sbjct: 28 LARHWYPVALAREVGEKP-VGTRLLDQPLVIYKSGDEVV-VATNVCPHRGVPLSLGTQQG 85
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI---WPGDEPPT 169
+ CPYHG + GKC +P+ R++ +++ P FE+ G+IW GD P
Sbjct: 86 DSVVCPYHGLRFGGGGKCVHVPAHPARDIPERLHLRTFPSFERYGLIWTCLDAEGDAPAA 145
Query: 170 ATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
IP + S F+ +++ G L+ LD+AH F HT TFA VP+
Sbjct: 146 GDIPDMPHWDESEFQQITCPWIDINGFAGRQLEGFLDVAHFAFVHTETFADPDNAEVPAY 205
Query: 226 VKFLTPASGLQGYWDP---YPIDME------------FRPPCMVLSTIGISKPGKLEGQN 270
T YW YPI + FR +T+ I PG
Sbjct: 206 APKRTEYGFEAEYWSSVGNYPIGVSQRGVPGFNWLRHFRCHLPFTATLEIHFPG------ 259
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
L ++ P S + TRL ++ +F + L +Q ++ F +++ ED +
Sbjct: 260 ----TDRLVIMNAASPVSARVTRLFAPIARNFDTDLP----VQDVY-DFNQRIFEEDKAI 310
Query: 331 VLGQ 334
V Q
Sbjct: 311 VEAQ 314
>gi|421849881|ref|ZP_16282853.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus NBRC 101655]
gi|421853347|ref|ZP_16286023.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459301|dbj|GAB28056.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371478455|dbj|GAB31226.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 372
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 19 DQTCASPSTSKQ-SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP 77
DQT + S++++ +++ KGK+ + + S P ++W+PVA+S +LK +
Sbjct: 2 DQTAQTDSSTQELAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 78 FDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 137
P + R G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGTPIALVRPDAGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 138 P---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATIPCLLPPSGFEIHAEIVMELP 192
P +L N +++ PC EQ+GMI+++PGD + T +P L + +
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGDPEKADTVPLPAHLARASNPAYKTRYFGTT 170
Query: 193 I--EHGLLLDNLLDLAHAPFTHTSTFAK 218
I + + +NL+D+ H F H+ +
Sbjct: 171 IGCHYSFMHENLMDMNHQ-FMHSKQMGQ 197
>gi|384421414|ref|YP_005630774.1| vanillate O-demethylase oxygenase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353464327|gb|AEQ98606.1| vanillate O-demethylase oxygenase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 358
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKICNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS + N ++ P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRRFPVAEKHRYVWIWPGDPAQADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 217
L G I+A+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 218 -----KGWSVPSLVKFLTP--------ASGL--QGYWDPYPIDMEFRPPCMVLSTIGISK 262
+G +V + + P A L +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVTVSRWMHNIDPPPFWAGQIARHLDYRGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTVTPETDTTCHYFWAFMRNYA---LHDQSLTTLTREGVTG 299
Query: 323 VLNEDLRLVLGQQERMN 339
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|339323059|ref|YP_004681953.1| LysR family transcriptional regulator [Cupriavidus necator N-1]
gi|338169667|gb|AEI80721.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
Length = 351
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 127/337 (37%), Gaps = 45/337 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ + ++ + P +++R +DG +++ C HR PL +G
Sbjct: 3 VRNTWYVAGWDKEVGASDLFSRTIIGIPVLMYRAEDGTLVAIEDRCCHRGAPLSVGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG ++ G+C + P+ Q ++++ P E+ IWIW GD A P
Sbjct: 63 DCVRCMYHGLKFDPTGQCIEAPAQQRIPPQARVRTFPVVERNSWIWIWMGD--AEAADPA 120
Query: 175 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-------- 219
L+P P+ + I + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTHWLDDPAWRSLDGYIHYD--VNYLLIADNLLDFSHLPFVHPTTLGGSEDYAGVQP 178
Query: 220 -------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 262
W++ P K + G W+ Y F P ++L G++
Sbjct: 179 TVERLEDGVRITRWTIDTEAPPFAKQVKDWPGKVDRWNIY----NFTLPAILLMDSGMAP 234
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
G + R A P + T + +FA P +
Sbjct: 235 TGTGAQEGRRIDAAEFRGCQALTPETENSTHYFFAHPHNFAI---DQPEVTRSIHQAVVA 291
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ED ++ QQ + + +P D ++R
Sbjct: 292 AFDEDRDIITAQQRSLALAPDFKMIPFSIDAALSQFR 328
>gi|418520159|ref|ZP_13086209.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704113|gb|EKQ62598.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 358
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLCGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|70730833|ref|YP_260574.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas protegens
Pf-5]
gi|68345132|gb|AAY92738.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas protegens
Pf-5]
Length = 352
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 130/338 (38%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L+ + C E V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGKPLGRQICGEH-MVFYRAHEGRVTAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 120
Query: 177 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ + G +W D P+D F PP VL +G++
Sbjct: 176 QTTVDGDQVVTARHMHNVMPPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
G Q + P S + M+ +F P + R
Sbjct: 236 HAGHGGYDAPAQYKASSIVVDFITPESDTSIWYFWGMARNFNP---QDPALTESIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLAQPQRNLLKLNIDAGGVQSR 330
>gi|21224238|ref|NP_630017.1| oxidase [Streptomyces coelicolor A3(2)]
gi|2815311|emb|CAA16434.1| putative oxidase [Streptomyces coelicolor A3(2)]
Length = 395
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+P+ + ++ +D + + V++R DG C C H+ L G +
Sbjct: 2 IPNQWYPIVEAQEVGNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I+CPYHG+ Y DG C +P+ ++ R ++++ + P EQ G++W+W GDE PTA
Sbjct: 62 NTIECPYHGFRYGADGACRVIPAMGSEARIPGSLRVPTYPVREQFGLVWMWWGDERPTAD 121
Query: 172 IPCLLPPSGF----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
+P + P+ +++A P+ + +++LL+ H + H + + L+
Sbjct: 122 LPPVAAPAEVTDNRKLYATKRWTRPVHYTRYIESLLEFYHVTYVHRDHWFN--YIDYLLL 179
Query: 228 FLTPAS-GLQG 237
+ TP+ GL G
Sbjct: 180 YGTPSKFGLDG 190
>gi|87199506|ref|YP_496763.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135187|gb|ABD25929.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 40/275 (14%)
Query: 54 NTR-LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
NTR L+N W+ A S++++ + + +I+R DG P +++ C HR PLH+G
Sbjct: 8 NTRYLENAWYVAALSSEVQGQALFHRKILDISVMIYRLSDGSPTALRDRCPHRFAPLHMG 67
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT 169
I C YH +++ G C P +++ P E+ G IWIW G++
Sbjct: 68 KREGDEISCFYHALRFNSVGTCTHNPHGNGNIPDGANVRAFPLLERHGFIWIWMGEQ--- 124
Query: 170 ATIPCLLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
P LLP SG M + L++DN++DL+H H + +G
Sbjct: 125 TADPDLLPDFSPLEDSGPNAVGYTYMHMDANFELIVDNVMDLSHIDHVHGEIISTRGKLS 184
Query: 223 PSLVKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGIS 261
P + K + + + W+ P P D+ + PP + ++
Sbjct: 185 PKIPKIRSTSRSISSRWEWEQQPAMLILAPFLPAPDAEARQYFDITWTPPANIQLSV--- 241
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
G ++G+ + A + LH P ++ T +
Sbjct: 242 --GAVQGELSFDEAVMQYDLHTATPETQFTTHYFF 274
>gi|294464913|gb|ADE77961.1| unknown [Picea sitchensis]
Length = 480
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 142/354 (40%), Gaps = 70/354 (19%)
Query: 61 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
W+P A DL D +V +D + W +F ++C HR PL
Sbjct: 95 WYPAAPEYDLDKRVPHAFTVMGLDIVVWWDKRSQTWQVF----------DDSCPHRRAPL 144
Query: 110 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI--------KSLPCFEQEGMIW 160
G ++E G +QC YHGW + G C+ +P ++ + P +Q+G+IW
Sbjct: 145 SEGRIDEDGDLQCSYHGWCFGPKGDCKYIPQEPSDGPRVHTSKRACASTYPSLQQQGIIW 204
Query: 161 IWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
WP +P IP L PS F + +LP + +L +NL+D +H P+
Sbjct: 205 FWPNTDPQFKDTALEKKPPLIPALSDPS-FPCTLSM-RDLPYGYEILTENLMDPSHVPYA 262
Query: 212 HTSTFAKG---WSVPSLVKFLTP---------ASGLQGYWDPYPIDMEFRPPCMVLS--T 257
H ++ W+ S + P SG +G F PPC+ +S T
Sbjct: 263 HYGLGSQTPMPWNNISFKRAGRPLDLCLERLDESGFRG--KQVTGFSNFTPPCVYVSHHT 320
Query: 258 IGISKPGK----LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 313
SK GK + G + T + + +C+P S ++RL++ +FA + + +
Sbjct: 321 FKTSKEGKPQPSISGTEQEKMKT-IFFIFICIPVSPGRSRLIWAFPRNFALWMYRL--LP 377
Query: 314 YLWRHFAEQVLNEDLRLVLGQQER--MNNGANVWN----LPVGYDKLGVRYRLW 361
H + + + L +ER N G W +P D V +R W
Sbjct: 378 RWLTHIQQNLFPDSDLYFLHLEERKLQNYGKTNWEKACYVPTAADAFVVAFRKW 431
>gi|434395181|ref|YP_007130128.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428267022|gb|AFZ32968.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 369
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ V+++ LK ++P +++ ++R +G +++ C H+ LH G V+
Sbjct: 24 NHWYAVSWANQLKPGDIIPVVIWQQAIAVYRDINGQLHALEDFCPHKGVALHKGKVHGCN 83
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+ C YHGWE+ ++G C K+P +L ++S P E+ +IWI+PG+ AT C
Sbjct: 84 LACAYHGWEFDSEGSCVKIPYLPEKQKLPRASVRSYPIQEKYNLIWIFPGEPHLAAT--C 141
Query: 175 LLP--PSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
LP P FE +V + +N +D+ H F H +GW P L+
Sbjct: 142 QLPHIPEFFETEWLVVPISAHFQAHFSICNENTMDVFHG-FLHQGL--QGWFDPVLLSLK 198
Query: 230 TPASGLQGYWD---------------------PYPIDMEFRPPCMVLSTIGIS 261
+ ++ ++ PI +E+R P S G+S
Sbjct: 199 ETENSVRAEYNVSYKGHMAKFLGLSDRADTVTTLPITVEYRYPHYATSLQGVS 251
>gi|390993286|ref|ZP_10263466.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372551979|emb|CCF70441.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 350
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|365899304|ref|ZP_09437217.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
gi|365419928|emb|CCE09759.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
Length = 347
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 49/327 (14%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGTVTALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +++ G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFNAQGRCTFMPSQETINPSACVRAYPAIERHRFIWLWMGD--PALADPADI 124
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 218
P G IH + ++ L++DNL+DL H F H S+
Sbjct: 125 PDMHWNHDPAWAGDGKTIH------VKCDYRLVVDNLMDLTHETFVHGSSIGNEAVAEAP 178
Query: 219 -----GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
G ++ + F G +G D + I + F PC V +G++ G
Sbjct: 179 FDVTHGERTATVTRWMRGIEPPPFWAKQLGKEGLVDRWQI-IRFEAPCTVTIDVGVAPAG 237
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
+ R + L+ P + + + ++ L + R +
Sbjct: 238 TGAPEGDRSQGVNGMVLNTITPETERTCHYFWAFVRNYQ--LSEQRLTTEI-REGVSGIF 294
Query: 325 NEDLRLVLGQQERM--NNGANVWNLPV 349
ED ++ QQ M N G +NL +
Sbjct: 295 REDELILEAQQRAMDENPGRVFYNLNI 321
>gi|16330378|ref|NP_441106.1| hypothetical protein slr1747 [Synechocystis sp. PCC 6803]
gi|383322119|ref|YP_005382972.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325288|ref|YP_005386141.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491172|ref|YP_005408848.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436439|ref|YP_005651163.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|451814536|ref|YP_007450988.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
gi|1652868|dbj|BAA17786.1| slr1747 [Synechocystis sp. PCC 6803]
gi|339273471|dbj|BAK49958.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|359271438|dbj|BAL28957.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274608|dbj|BAL32126.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277778|dbj|BAL35295.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958298|dbj|BAM51538.1| hypothetical protein BEST7613_2607 [Synechocystis sp. PCC 6803]
gi|451780505|gb|AGF51474.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
Length = 469
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 23/302 (7%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 116
+ W+P+A+ DL F E VI+ + V + C HR PL G +N+
Sbjct: 31 RAVWYPLAYEEDLDKRKPTRFTLLGEDLVIWWEANSQQWRVYADQCPHRLAPLSEGRINK 90
Query: 117 -GRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEGMIWIWPG--DE 166
G+++CPYHGW ++ G+C+ +P + ++SLP +G+++ +PG D+
Sbjct: 91 AGQLECPYHGWTFAGSGQCQAIPQQHTGGQAHTSKRACVRSLPTQVAQGLLFAFPGETDQ 150
Query: 167 PPTATIPCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
+P + G + + +LP + L++N+LD +H P+TH T K +V
Sbjct: 151 AEKVALPLVDVLDGDQSEWVCLNTFRDLPYDAFTLMENVLDSSHIPYTHHKTVGKRSNVS 210
Query: 224 --SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 281
L G G W+ P R + T PG + T + +
Sbjct: 211 PVDLEIIHGDRQGFTGIWEEGP-----RKGTLGKQTTTFIAPGLMWHDLTSKQFGRTLTV 265
Query: 282 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 339
P + RL R F S + F + H + + ED ++ L QER
Sbjct: 266 VYATPIRPGECRLFARFPFKFPSKFPRLVIGFTPRWYSHLGQNRVLEDDQIFLHFQERFV 325
Query: 340 NG 341
G
Sbjct: 326 QG 327
>gi|367475962|ref|ZP_09475388.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
gi|365271749|emb|CCD87856.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
Length = 347
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDT 66
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++S G+C MPS + N +++ P E+ IW+W G+ P P +
Sbjct: 67 VVCGYHGLKFSPQGRCAFMPSQETINPSACVRAYPAVERHRFIWLWMGE--PALADPATI 124
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 219
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 220 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEG 243
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
R + L+ P + K + + ++ + + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLSEQR---LTTEIREGVSGIFREDEFI 300
Query: 331 VLGQQERM--NNGANVWNLPVGYDKLGVR 357
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|427718313|ref|YP_007066307.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427350749|gb|AFY33473.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 351
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N L+N W+ S +K MV EP ++ R +DG +++ C HRA PL G
Sbjct: 6 NFLLRNIWYYALPSYQIKPGKMVSRTFLGEPVLLVRSQDGKVSALRDICPHRAVPLSCGR 65
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD-- 165
+ ++C YHGW + G+C +PS T L +KS E +G IWI+ D
Sbjct: 66 FDGQEVECCYHGWRFDPAGRCTAIPSLVAGQETDLSRFNVKSYEIREAQGNIWIYMADPD 125
Query: 166 --EPPTA--TIPCLLPPSGFEIHAEI---VMELPIEHGLLLDNLLDLAHAPFTH 212
+PP + IP + +GFE + VM P + L+D AH+P+ H
Sbjct: 126 NPQPPDSEIEIPVI---AGFEERSPQLVEVMRFPCFVDHAVTGLMDPAHSPYVH 176
>gi|421674174|ref|ZP_16114109.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|421690706|ref|ZP_16130374.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|445487023|ref|ZP_21457644.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
gi|404564084|gb|EKA69276.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|410384935|gb|EKP37433.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|444769250|gb|ELW93447.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
Length = 358
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IWIWPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|260427622|ref|ZP_05781601.1| rieske domain protein [Citreicella sp. SE45]
gi|260422114|gb|EEX15365.1| rieske domain protein [Citreicella sp. SE45]
Length = 356
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 31/264 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +ST++ DD + F E V+FR DG +++ C HR PL G
Sbjct: 5 VKNAWYVAGWSTEI-DDELRRFTILGEHVVMFRTSDGSVAALEDRCPHRLLPLSKGKRIG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDEP---PTAT 171
+QC YHG + G C ++P T L ++ +++ P E+ G++WIW GD P A
Sbjct: 64 DTVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVEAYPIVEKHGIVWIWMGDAEKADPEAV 123
Query: 172 --IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 227
+P P G+ H + L + + +NL+D AH F H +T S VP V+
Sbjct: 124 FDMPEFTDP-GWAAHHGDALHLKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQ 182
Query: 228 -------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
F G G D + + PC + G + K
Sbjct: 183 TEGEAIVAWRWIRDAEPIGFFKAFGGFTGNVDRWHYYYLY-TPCTAVIDFGSIETEKHCA 241
Query: 269 QNTRQCATHLHQLHVCLPSSRKKT 292
+ R + LH P + T
Sbjct: 242 EEDRDQGVRIFALHFMTPVTETYT 265
>gi|329847866|ref|ZP_08262894.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
gi|328842929|gb|EGF92498.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
Length = 351
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 19 DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPF 78
DQT S S ++++ +V G+ LK+ W+ A S DLK + F
Sbjct: 3 DQTTTSASRAEKTERVVFGQ----------------GFLKDCWWFAALSGDLKPGKLQRF 46
Query: 79 DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGR---IQCPYHGWEYSTDGKC 134
EP ++ R DG +++ C HRA PL G V +G +QCPYHGW ++T+G C
Sbjct: 47 VFLGEPVLLGRDLDGKVYGIRDICPHRAAPLSAGQMVRDGSACVVQCPYHGWTFNTEGTC 106
Query: 135 EKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP------SGFE 182
+PS + +K+++ EQ+G++WI+ + T P PP G
Sbjct: 107 TSVPSLTPDQEMDVNRIKVRNYTVREQQGIVWIYITADARRPTEPDHEPPVLPGVVGGNP 166
Query: 183 IHAEIV-MELPIEHGLLLDNLLDLAHAPFTH 212
I E + + I+H ++ L+D AH P+ H
Sbjct: 167 IIVETMDFDSHIDHAVV--GLMDPAHGPYVH 195
>gi|49176900|ref|YP_025403.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72384285|ref|YP_293638.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|39777480|gb|AAR31055.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72123638|gb|AAZ65781.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 358
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+ A ++ ++ E+P V FR DG + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRQ-LLARTLLEQPVVFFRRNDGSVAALADRCSHRRVSLSLGRLIGD 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+QC YHG ++ DG C +P Q R + ++S P E++G +WIWPGD P
Sbjct: 63 EVQCGYHGLTFAGDGSCTSIPG-QSRVPPSACVRSYPVVERDGFVWIWPGD--PALANET 119
Query: 175 LLPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 215
L+P + + P E L+ ++N+LDL+H + H T
Sbjct: 120 LVPDYAEICSSGRYVGRPAEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|422298704|ref|ZP_16386294.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas avellanae
BPIC 631]
gi|407989564|gb|EKG31854.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas avellanae
BPIC 631]
Length = 354
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 44/244 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGK 265
GK
Sbjct: 236 HAGK 239
>gi|262279727|ref|ZP_06057512.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
calcoaceticus RUH2202]
gi|262260078|gb|EEY78811.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
calcoaceticus RUH2202]
Length = 358
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IWIWPG++ A +P
Sbjct: 62 GNLVCGYHGLVMDCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|120402016|ref|YP_951845.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119954834|gb|ABM11839.1| Rieske (2Fe-2S) domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 380
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
+GP +P L+ W PV S +L+ VP E ++RG+DG+ V CAHR
Sbjct: 12 TGPGRPAGHLLRQRWQPVYASEELEAGRAVPLKILHEELTLYRGEDGVAHIVAGRCAHRG 71
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVKIKSLPCFEQEGMIWIWP 163
L +G+V ++C YHGW Y G+C P+ + V+I S P E G IW +
Sbjct: 72 VLLAVGTVEGDCVRCRYHGWRYDGAGQCVDQPAERRSFADKVRIASYPVEEYFGFIWTYL 131
Query: 164 GDEP 167
G+ P
Sbjct: 132 GESP 135
>gi|332855082|ref|ZP_08435687.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870056|ref|ZP_08439017.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332727662|gb|EGJ59079.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332732472|gb|EGJ63724.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
Length = 391
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 36 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 94
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 95 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 154
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 155 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 200
>gi|193076823|gb|ABO11546.2| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 391
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 36 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 94
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 95 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 154
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 155 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 200
>gi|407773414|ref|ZP_11120715.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
gi|407283878|gb|EKF09406.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
Length = 338
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 140/330 (42%), Gaps = 33/330 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+NFW+ + ++ + C E V++R D ++++C HR PL G V
Sbjct: 3 LRNFWYVAGWDGEIGRTPVARTICNENV-VLYRRADRSLVALEDSCPHRLLPLSQGYVEG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPT--ATI 172
R+ C YHG E+ DG C MP+ Q + + +++ P E++ +W+W GD+ A +
Sbjct: 62 DRLVCGYHGLEFDGDGACVHMPNQQSIHPEACVRAYPVVEKDRFVWVWIGDKEKADEALV 121
Query: 173 PCLLPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 218
P +P + E + ++ + LL+DNL+DL+H + H S+ +
Sbjct: 122 P-DIPHASEEGWVFDGGTYDVKCGYELLVDNLMDLSHETYVHPSSIGQLEITESLPQTRS 180
Query: 219 ---GWSVPSLVKFLTP----ASGLQG--YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
+V ++ + P A+ L+ D + I F P V+ +G++ G Q
Sbjct: 181 DDESVTVERWMENIVPPPFWANNLKSKEVCDRWQI-CTFTLPSNVMIDVGVALAGTGAQQ 239
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 329
R ++ P + R + M +F + Q + + +V EDL
Sbjct: 240 GDRSKGVTGIVVNCMTPETETTCRYYWGMVRNFD--IDDNGLTQNI-KDAQAKVFYEDLE 296
Query: 330 LVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+V GQQ M L D GVR R
Sbjct: 297 VVEGQQANMLRHPERKLLNFNIDAGGVRAR 326
>gi|421652401|ref|ZP_16092760.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425747423|ref|ZP_18865431.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|445457815|ref|ZP_21446730.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
gi|408505527|gb|EKK07248.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425493997|gb|EKU60219.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|444775995|gb|ELX00047.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
Length = 358
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|169796641|ref|YP_001714434.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213156161|ref|YP_002318581.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|301347277|ref|ZP_07228018.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB056]
gi|301510924|ref|ZP_07236161.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB058]
gi|301595598|ref|ZP_07240606.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB059]
gi|417573227|ref|ZP_12224081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|421644603|ref|ZP_16085081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|421646206|ref|ZP_16086658.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|421657203|ref|ZP_16097476.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|421700370|ref|ZP_16139887.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|421800681|ref|ZP_16236650.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
gi|169149568|emb|CAM87457.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213055321|gb|ACJ40223.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|400208795|gb|EJO39765.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|404570752|gb|EKA75825.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|408504744|gb|EKK06479.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|408517593|gb|EKK19131.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|408713779|gb|EKL58935.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|410406552|gb|EKP58555.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
Length = 358
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|420241041|ref|ZP_14745210.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF080]
gi|398073019|gb|EJL64206.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF080]
Length = 427
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 104
+GP P + +W P +T+L D V E + F+ DG G + CAH
Sbjct: 13 TGPGTPMGNLFRRYWLPALMATELPGPDCDPVRVSLLSERLIAFKDSDGKIGMMDEFCAH 72
Query: 105 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMI 159
R L G EG ++CPYHGW+Y T G+C ++PS + +K+KS PC E G+I
Sbjct: 73 RGVSLWFGRNEEGGLRCPYHGWKYDTTGQCVEVPSEPASSGFCQKIKLKSYPCVELGGVI 132
Query: 160 WIWPGDEPPTATIPCL 175
W + G +P
Sbjct: 133 WTYMGPPEEQPEVPAF 148
>gi|417544904|ref|ZP_12195990.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|421667444|ref|ZP_16107514.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|421669624|ref|ZP_16109643.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
gi|400382792|gb|EJP41470.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|410384719|gb|EKP37225.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|410388009|gb|EKP40449.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
Length = 358
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRINGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421806406|ref|ZP_16242270.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC035]
gi|410417750|gb|EKP69518.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC035]
Length = 358
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|418472321|ref|ZP_13042068.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
gi|371547060|gb|EHN75473.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
Length = 384
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+P+ + ++++D + + V++R DG C C H+ L G +
Sbjct: 2 IPNQWYPIVETQEVRNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I+CPYHG+ Y DG C +P+ Q R ++++ + P EQ G++W+W GDE P A
Sbjct: 62 NTIECPYHGFRYGADGACRVIPAMGAQARIPGSLRVATYPVREQFGLVWMWWGDERPAAD 121
Query: 172 IPCLLPP----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
+P + P +++A P+ + +++LL+ H + H + + L+
Sbjct: 122 LPPVQAPPEVTDNRKLYATKRWTRPVHYTRYIESLLEFYHVTYVHRDHWFN--YIDYLLL 179
Query: 228 FLTPAS-GLQG 237
+ TP+ GL G
Sbjct: 180 YGTPSKLGLDG 190
>gi|254430294|ref|ZP_05043997.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
gi|197624747|gb|EDY37306.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
Length = 330
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L NFW+ V S+ LKD ++++R G P + C HR G V
Sbjct: 5 LSNFWYAVEHSSTLKD-APCQATLLNRTYILYRDDTGQPHAAVDQCPHRGASFKAGWVEG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
++CPYHGW + +G C ++P+ Q ++ +LP E G +WI+PGD P+
Sbjct: 64 SCLRCPYHGWSFDAEGHCVRIPADQPGVPIPAQARLHTLPVQESSGFVWIFPGD--PSLA 121
Query: 172 IPCLLPPSGFEIHAEIVMELPIEH------GLLLDNLLDLAHAPFTHTSTF 216
P L+ P+ E+ AE + E+ ++++ LD +HAPF H F
Sbjct: 122 DPSLI-PAFPELGAEGWRPVSGEYLWHANFSRVVESGLDTSHAPFVHKPFF 171
>gi|58040226|ref|YP_192190.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter oxydans
621H]
gi|58002640|gb|AAW61534.1| Bacterial ring hydroxylating dioxygenases alpha subunit
[Gluconobacter oxydans 621H]
Length = 390
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+PVA+S +LK + +P + R DG +++ CAHR PL LG V+
Sbjct: 51 DYWYPVAWSRELKRGKTIGTRYAGQPIALVRPMDGSVFALEDRCAHRQVPLSLGKVSGEA 110
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD + P
Sbjct: 111 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPAKAESTP-- 167
Query: 176 LPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSVP 223
P G + E + + + +NL+D+ H F H F G P
Sbjct: 168 FPQLGSVGNPEYKTRRFGETVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGRDEP 226
Query: 224 SLVK 227
+LV+
Sbjct: 227 TLVE 230
>gi|410647609|ref|ZP_11358032.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
gi|410132827|dbj|GAC06431.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
Length = 349
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 140/352 (39%), Gaps = 49/352 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D + + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNCWY-VACTPDEFTNKPLGRQICGERIVFYRGTEGKVSAVEDFCPHRGAPLSLGYVEDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG + DG +MP ++ I+S P E+ G +W+W G+ T P +
Sbjct: 63 LLVCGYHGLKMGCDGSTAEMPGQRVNGFPCIRSYPVVERHGFVWVWTGES--TLADPSKI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 212
P + + E + + ++ L++DNL+DL H + H
Sbjct: 121 PELEWANNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEVPVHTTSE 180
Query: 213 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 263
TS F + P + A+ L D P+D F PP V+ +G++
Sbjct: 181 DDMVVTSRFMENVLAPPFWQAALRANHLA---DDVPVDRWQLCRFTPPSQVMIEVGVAHA 237
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-- 321
G + + + P + + M+ +F P + L E
Sbjct: 238 GNGGYEADPKFKAGSIVVDFITPETETSIWYFWGMARNFR------PEDEALTDQIREGQ 291
Query: 322 -QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 372
Q+ +EDL ++ QQ + + L + D GV+ R D + K QL
Sbjct: 292 GQIFSEDLEMLERQQRNLLAYPDRNLLKLNIDTGGVKSRRILDRIIKEECQL 343
>gi|299530152|ref|ZP_07043578.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298721809|gb|EFI62740.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 354
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 41/312 (13%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A S++L D V E V+FR DG +++ C HRA PL G+V
Sbjct: 23 NQWYVAAHSSELADKP-VGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCG 81
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHG Y+ +GKC ++P + K+ + E++G+IWIW G +P C
Sbjct: 82 LRCGYHGLLYNHEGKCVEIPGQEKIPTKAKVSAYHVQERDGLIWIWFG-KPENPEPMCDA 140
Query: 177 PPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVP-------- 223
P E V + H L+ DNLLDL+H + H T +
Sbjct: 141 PSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHTIGGNAKLHMNAEMKVE 200
Query: 224 ------SLVKFLTPASGLQGYWDPYPI--------DMEFRPPCMVLSTIGISKPGKLEGQ 269
+V+++ + Y YP ++EFR +++ T G G
Sbjct: 201 SEGDFVRVVRYMPDSVPPPTYSAAYPFKGNVDRWQEIEFRVSHLLIWT-GAVDQGTDAMD 259
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ---VLNE 326
+ ++ H+ H P S + M+ + A ++ V R EQ +E
Sbjct: 260 DPQRGGFHMRGFHGVTPESETTCHYFWTMATNPAKDVEEVK------RKVLEQTELTFDE 313
Query: 327 DLRLVLGQQERM 338
D ++ Q + M
Sbjct: 314 DKVVIEAQYQNM 325
>gi|424060551|ref|ZP_17798042.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
gi|404668503|gb|EKB36412.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
Length = 358
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|398993816|ref|ZP_10696751.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133724|gb|EJM22909.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 368
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 43 SLNVSGPVQPYNTRLK-----NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGC 97
S++V+ P P + + + W+ FS +L + + EP VIFR +G
Sbjct: 2 SVHVTQPFDPLHDKPAAAFPLDQWYVAGFSWELNNKPLAR-TLLGEPLVIFRTGNGQVAA 60
Query: 98 VQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFE 154
+++ C HR+ PL LG+V E ++C YHG YST G+C ++P Q++ K++S E
Sbjct: 61 LEDRCCHRSVPLSLGTVEEQGVRCGYHGLLYSTSGQCLEIPG-QVKIPGKAKVRSFHICE 119
Query: 155 QEGMIWIWPGDEPPTATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHA 208
Q+ ++W+W G + A P PP SG + V L+ DNLLDL+H
Sbjct: 120 QDQILWVWFGHDVLAA--PLREPPAYPHHTSGEYLFGGDVYHYDAPWQLIHDNLLDLSHL 177
Query: 209 PFTHTSTFA 217
+ H T
Sbjct: 178 GYVHLHTIG 186
>gi|220926846|ref|YP_002502148.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219951453|gb|ACL61845.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 361
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + C + V++R DG +++ C HR PL LG ++
Sbjct: 10 NAWYAVAWDHEIKRELTARTIC-DTGIVLYRRTDGQVAALEDACWHRLLPLSLGHLHGDE 68
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++ G+C MP+ + N +++ P E+ +IW+W GD P P +
Sbjct: 69 VVCGYHGLIFNPAGRCTFMPAQETINPSACVRAFPVVERYRLIWVWMGD--PALADPDTV 126
Query: 177 PPSGFEIHAEIVME------LPIEHGLLLDNLLDLAHAPFTHTSTFA------------- 217
P + A V E L ++ L++DNL+DL H + H +
Sbjct: 127 PDFHWNSDAPWVGEGGTFYSLQCDYRLVIDNLMDLTHETYVHAGSIGDEAITRNPFEVTH 186
Query: 218 --KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
+ +V ++ + P G G+ D + I + F PC+V +G++ G Q
Sbjct: 187 TDRKVTVERWMENIEPPPFWARLLGRPGHVDRWQI-IHFEAPCVVAGDVGVALTGTGARQ 245
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
R + L P + + +F
Sbjct: 246 GDRSQGVNGFFLAAITPETGTSCHYFWNFVRNF 278
>gi|424741369|ref|ZP_18169728.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-141]
gi|422944994|gb|EKU39967.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-141]
Length = 358
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IWIWPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|383648311|ref|ZP_09958717.1| oxidoreductase subunit alpha [Streptomyces chartreusis NRRL 12338]
Length = 353
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 44/284 (15%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + ++ E V++R ++ G P + + C HR PL +
Sbjct: 6 RNQWYVAAYSHEVGRE-LLGRTILGETLVLYRTEEEGTPVVLHDRCVHRRYPLSEAPTRL 64
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P
Sbjct: 65 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD--PALAD 122
Query: 173 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 212
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 123 PQSIPRARHLDSPGWVTVRG---MEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAET 179
Query: 213 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 261
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 180 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIA 238
Query: 262 KPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
G L E + H + PS K + +S D+A+
Sbjct: 239 PVGVLPEPDGSDPNGFHTEITYAITPSGDGKVYDFWAVSRDWAT 282
>gi|422590590|ref|ZP_16665244.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
gi|330877736|gb|EGH11885.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
Length = 354
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 44/244 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R +D V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVVDKPLGRQICNEKMVFYRDQDQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGEREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 262 KPGK 265
GK
Sbjct: 236 HAGK 239
>gi|215484103|ref|YP_002326328.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|421622339|ref|ZP_16063242.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|421795000|ref|ZP_16231088.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
gi|213987796|gb|ACJ58095.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|408695955|gb|EKL41509.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|410402452|gb|EKP54569.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
Length = 358
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|414079743|ref|YP_007001167.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413973022|gb|AFW97110.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 469
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 32/312 (10%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRA 106
G P + +L W+PV + DL PF + VI+ K+ + C HR
Sbjct: 19 GGSNPDSFQLAEAWYPVHYLQDLDKSKPTPFTLLGKDIVIWWDQKNSSWQVFIDQCPHRL 78
Query: 107 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQEG 157
PL G +NE G ++CPYHGW ++ DG C+K+P Q+ K + SLP E++G
Sbjct: 79 APLSEGRINEDGLLECPYHGWSFAGDGSCQKIPQ-QVAGGKAETSPRACVPSLPTTERQG 137
Query: 158 MIWIWPGDEPPTAT---IPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 210
+++++ G+ P A +P + P P G+ I ++P + LL+N+LD +H F
Sbjct: 138 LLFVYAGN-PENAINTKVPVVEPIESAPEGWVI-MNTFRDVPYDALTLLENILDPSHIAF 195
Query: 211 THTSTFA-KGWSVPSLVKFLTPAS-GLQGYWDPYPIDMEFRP-PCMVLSTIGISKPGKLE 267
TH T + + P ++ + G +G W +P LST I+ PG L
Sbjct: 196 THHLTVGNRANAAPLELEIVESGKYGFEGIW-----KQGLKPGQSGKLSTTFIA-PG-LM 248
Query: 268 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLN 325
+ + + +P + + R++ R F S + + + H + +
Sbjct: 249 WHDINAEKGRILTVVYAVPIRKGECRIIARFPFKFKSQIPGFFIKIRPRWYVHIGQNGVL 308
Query: 326 EDLRLVLGQQER 337
ED ++ L QER
Sbjct: 309 EDDQIFLHYQER 320
>gi|421787610|ref|ZP_16223955.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
gi|410406503|gb|EKP58507.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
Length = 358
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVIEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|284928660|ref|YP_003421182.1| ring-hydroxylating dioxygenase, large terminal subunit
[cyanobacterium UCYN-A]
gi|284809119|gb|ADB94824.1| ring-hydroxylating dioxygenase, large terminal subunit
[cyanobacterium UCYN-A]
Length = 349
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 36/350 (10%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L+N W+ S DLK ++ EP +I R K+G +++ C HR PL GS
Sbjct: 2 TTLLRNCWYVAVSSKDLKPKKIIHKKILGEPILIGRKKNGQVFAMRDICPHRGIPLSYGS 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 162
+++ I C YHGW+++T +GKC+++PS + +++ + PC E +G IWI+
Sbjct: 62 LDQDDITCRYHGWKFNTNNGKCKEIPSLTKYDNLDVERIQVLTYPCEEVQGNIWIYFINT 121
Query: 163 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
D P TIP L P I + I+H ++ L+D AH P+ H +
Sbjct: 122 NKSQSKSTDIPSVPTIPDFGKLSPG---ITETMQFSCNIDHAII--GLMDPAHGPYIHDA 176
Query: 215 TFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
+ + VK QG+ Y + + RP ++ + I +L G T
Sbjct: 177 WWWRSGPRKFRVKEKHYEPVSQGFRLVSYNMPVSARPYKILGKDVSIEIIFQLPGVRTEI 236
Query: 274 CATHLHQ--LHVCLPSSRKKTRLLYRM---SLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
+ L C+ + + +++ ++ +A+V K P + L R F L +D
Sbjct: 237 LKGDRYSACLLTCITPIDEYSCEIFQSVYWTIPWAAVFK--PLLSLLTRQF----LAQDR 290
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
++ QQE + ++ + + +RL ++ +PF+ P+
Sbjct: 291 DAIIQQQEGLMYDPSLMLIDDADTQAKWYFRLKQEYQRSQENNIPFVNPL 340
>gi|126641164|ref|YP_001084148.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421696591|ref|ZP_16136173.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
gi|404561352|gb|EKA66587.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
Length = 358
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|403673643|ref|ZP_10935934.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. NCTC
10304]
Length = 358
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|405377776|ref|ZP_11031712.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium sp. CF142]
gi|397325682|gb|EJJ30011.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium sp. CF142]
Length = 427
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQNT 101
L+ +GP P + +W P +++L D V E + F+ +G G +
Sbjct: 10 LSRTGPGTPMGDLFRRYWIPALMASELPGPDCDPVRVSLLSERLIAFKDTNGKIGLMDEF 69
Query: 102 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQE 156
CAHR L G EG ++CPYHGW+Y T G+C ++PS + + +K+KS PC E
Sbjct: 70 CAHRGVSLWFGRNEEGGLRCPYHGWKYDTTGQCVEVPSEPVSSGFCQKIKLKSYPCVEFG 129
Query: 157 GMIWIWPGDEPPTATIPCL 175
G+IW + G E +P
Sbjct: 130 GVIWTYMGPEEHQPELPVF 148
>gi|375134014|ref|YP_004994664.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
gi|325121459|gb|ADY80982.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
Length = 358
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALAEEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|427704111|ref|YP_007047333.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347279|gb|AFY29992.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 361
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 58 KNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ VA S K VPF + +V+F +G+P + C HR L LG + E
Sbjct: 20 QNCWYAVASSFAFRKGPVAVPFAGHD--FVLFPDAEGLPRLFSDRCPHRGASLALGQLEE 77
Query: 117 GR-IQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 169
G ++CP+HGW+++ DG C + P S R+ + P E G IW+W G PP
Sbjct: 78 GGCLRCPFHGWKFAADGTCLEAPAEPAGASPPARSDLVGERPAVESRGFIWMWWGSGPPD 137
Query: 170 ATIPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P LLP P H E + + ++++ LD +HA + H TFA
Sbjct: 138 ---PALLPDLPVFPDEAWGHVESSFDWETHYSRVIESNLDNSHAYWVHKGTFAS 188
>gi|257059528|ref|YP_003137416.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589694|gb|ACV00581.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 349
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 149/348 (42%), Gaps = 32/348 (9%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
++ L+N W+ LK M EP ++ R +DG +++ C HR PL G
Sbjct: 2 SSLLRNAWYVALPGKQLKPGKMTHKKMLGEPVLVGRREDGEVFAMRDICPHRGIPLQYGW 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 162
+ + C YHGW+++T DG+C ++PS + +++ + PC E +G IW++
Sbjct: 62 LEGDGVCCCYHGWKFNTSDGRCSEIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 163 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
P + PP TIP + P I I I+H ++ L+D AH P+ H+S
Sbjct: 122 SKKEINPSELPPVPTIPDFGKVEPG---ISETIHFACHIDHAII--GLMDPAHGPYVHSS 176
Query: 215 TFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
+ + VK QG+ PY + + RP ++ + + I E + R
Sbjct: 177 WWWRSGPRKFRVKEKQYEPVAQGFRLVPYDMPVSARPYKILGNQVSIEI--VFELPSVRT 234
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDLRL 330
+ CL ++ T + F S+ +P+M + L Q L +D +
Sbjct: 235 EILRGDRYSACLLTT--ITPIDENECEAFQSIYWTIPWMGLFKPLLSLLTRQFLAQDRDV 292
Query: 331 VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 293 VIQQQEGLKYNPALMLIDDADTQAKWYFRLKQEYQKSQAENRPFKNPV 340
>gi|417551548|ref|ZP_12202626.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|417552026|ref|ZP_12203096.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|417562953|ref|ZP_12213832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|417564000|ref|ZP_12214874.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|421199265|ref|ZP_15656429.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|421454954|ref|ZP_15904301.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|421633387|ref|ZP_16074022.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|421654322|ref|ZP_16094652.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|421661633|ref|ZP_16101806.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|421804713|ref|ZP_16240616.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|445434199|ref|ZP_21439892.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
gi|395525535|gb|EJG13624.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|395555756|gb|EJG21757.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|395565232|gb|EJG26880.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|400212744|gb|EJO43703.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|400386003|gb|EJP49078.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|400392285|gb|EJP59331.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|408511089|gb|EKK12743.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|408706618|gb|EKL51925.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|408715639|gb|EKL60764.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|410410730|gb|EKP62622.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|444756604|gb|ELW81144.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
Length = 358
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|284991273|ref|YP_003409827.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Geodermatophilus obscurus DSM 43160]
gi|284064518|gb|ADB75456.1| Rieske (2Fe-2S) iron-sulphur domain protein [Geodermatophilus
obscurus DSM 43160]
Length = 424
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 129/310 (41%), Gaps = 39/310 (12%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NEG 117
N W+ A+ ++ + ++P P V++R G P + + C HR PL +G + +
Sbjct: 25 NAWYAAAWDHEVGRN-LLPTTIANRPVVLYRTTGGRPVALADACWHRLAPLSMGKLRGDD 83
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
I C YHG Y DG+ MP+ + N + S P E+ +WIWPGD P P L
Sbjct: 84 EIMCGYHGICYDPDGRATFMPAQETINPSATVHSFPVVERHRYVWIWPGD--PALADPAL 141
Query: 176 LPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPS 224
+P + H + + + + L++DNL+DL H F H S+ ++V
Sbjct: 142 VPDLYWNEHPDWAGDGKTIRVNCSYQLIVDNLMDLTHEQFVHGSSIGHDALSESEFTVTH 201
Query: 225 LVKFLTPASGLQG-----YW-----DPY-----PID----MEFRPPCMVLSTIGISKPGK 265
+ +T + G +W D + P+D + + P + +G++K G
Sbjct: 202 TDRTVTVTKWMLGIDPPPFWKRNLQDRFPDYEGPVDRWQIINYTAPSTIAIDVGVAKAGT 261
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ R ++ P + L+ + D+ + K V + R V
Sbjct: 262 GAPEGDRSQGVTGTVINTMTPETDNTCHYLWAFARDWC-LDKQVITTRL--REGVSNVFF 318
Query: 326 EDLRLVLGQQ 335
ED +++ QQ
Sbjct: 319 EDEQMLEAQQ 328
>gi|159036240|ref|YP_001535493.1| phthalate 4,5-dioxygenase [Salinispora arenicola CNS-205]
gi|157915075|gb|ABV96502.1| Phthalate 4,5-dioxygenase [Salinispora arenicola CNS-205]
Length = 406
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNT 101
L GP P L+ +W PV S L + P + E +V+FR DG GC
Sbjct: 10 LTRVGPGTPMGRLLREYWMPVMRSGRLTEPGGAPMAVELLGEKFVVFRADDGTLGCFAEA 69
Query: 102 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR------NVKIKSLPCFEQ 155
C HR L L + ++C YHGW++S G+ + PS VK++ P E
Sbjct: 70 CPHRGASLTLARNEDCALRCIYHGWKFSVTGQVLETPSEPAELTRFASRVKLRHHPVIES 129
Query: 156 EGMIWIWPGD------EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 209
G+IW+W G PP T L P F + A V+E GL D +D AH
Sbjct: 130 GGVIWVWIGGTGRSAPAPPAFTFTKLPPEQVFGLVA--VVECNWLQGLEAD--IDSAHVS 185
Query: 210 FTHTSTFAKGWSVPSLVKFLTP 231
H T A+ ++ L+ TP
Sbjct: 186 LLH-ETEARAGALRDLLDDRTP 206
>gi|37519596|ref|NP_922973.1| hypothetical protein gll0027 [Gloeobacter violaceus PCC 7421]
gi|35210587|dbj|BAC87968.1| gll0027 [Gloeobacter violaceus PCC 7421]
Length = 360
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
L NFW+ +A S + T +P P V++R G +++ CAHR L G V
Sbjct: 23 LNNFWYGLAHSPAI---TSIPRQVVVMGRPLVLYRTVGGRVVALEDRCAHRDTALSGGWV 79
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD---- 165
++CPYHGW Y+ DG C ++P+ Q R K+++ P E+ G++W++ G+
Sbjct: 80 EGNCLRCPYHGWRYAPDGGCTEIPANQPGVAISRLAKVETFPVQERHGLVWVFLGELPEA 139
Query: 166 -EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P ++P P + E + ++ N +D++HAPF H + F +
Sbjct: 140 QRPELPSLPEYAAPGWRAVRGEFTWSG--HYTRVIANTVDMSHAPFVHAAAFGR 191
>gi|330993701|ref|ZP_08317635.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329759275|gb|EGG75785.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 353
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 60/319 (18%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T L FW+PVA D+ D + +EP V++R + I + C HR PL LGS
Sbjct: 19 TILARFWYPVALERDVGDRPVAAM-LLDEPLVVYRAGEDI-VIAHDLCPHRGVPLSLGSG 76
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI-------WP 163
+ G I C YHG+ + G+C ++P+ + +++ P + G+IW WP
Sbjct: 77 DGGSIACAYHGFRFGAAGRCVRIPAHPDHAIPSKMHLRTYPAIRRYGLIWTCLRPDGQWP 136
Query: 164 GDEP---PTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
D A IP L+P +GF+ +++ G ++ LD+AH F HT+TFA
Sbjct: 137 DDATAIMANADIP-LMPHWQDAGFQQIVCPSIDIHGFAGRQMEGFLDVAHFAFVHTATFA 195
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN-----TR 272
+ +V P +G+ ++E+R ST+G G+++ R
Sbjct: 196 DPDN--PVVPGYRPVRTDRGF------EVEYR------STVGNYPIGRVDHGRPGFEWLR 241
Query: 273 QCATHLH----------------QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 316
THL ++ P S ++TRL + +F + L +Q ++
Sbjct: 242 HFRTHLPFTATLTVHFPDDGRLVIMNAASPVSARETRLFAPICRNFDTDLP----VQDVY 297
Query: 317 RHFAEQVLNEDLRLVLGQQ 335
F +V ED +V Q+
Sbjct: 298 -DFNRRVFEEDKAIVEAQK 315
>gi|346993484|ref|ZP_08861556.1| Rieske (2Fe-2S) protein [Ruegeria sp. TW15]
Length = 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 57 LKNFWFPVAFSTD----LKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
L+N W+ A+S D LK +T + E V++R +DG P +++ C HR PL G
Sbjct: 3 LRNCWYVAAWSKDIGRELKAETYLG-----ENVVLYRQQDGTPVALEDACPHRKLPLSKG 57
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
++ ++C YHG + GKC P+ + R +KS P ++ ++WIW GD P
Sbjct: 58 NLIGDTVECGYHGLTFDCSGKCTDSPTQRGMTPRRAVVKSYPVVDRYRLLWIWMGD-PEL 116
Query: 170 ATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
A + P F+ + VM++ + + DNLLD +H + H S+FA
Sbjct: 117 ANPDLIFPIENFDNPTWGMTDGGVMDIDCHYLWVCDNLLDPSHVAWVHVSSFA 169
>gi|226951632|ref|ZP_03822096.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
gi|226837613|gb|EEH69996.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
Length = 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGK MP+ + K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRTHGFPCNKAYAVIEKYGFIWVWPGEK--ALADESK 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWAEHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|407695328|ref|YP_006820116.1| oxidoreductase subunit alpha [Alcanivorax dieselolei B5]
gi|407252666|gb|AFT69773.1| Oxidoreductase subunit alpha [Alcanivorax dieselolei B5]
Length = 351
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 37/316 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ +S ++ + M + EP V +R +DG + C HR PL G V
Sbjct: 12 RNQWYVAGWSDEVSREPMERW-LLNEPVVFYRREDGAIVALHGRCPHRQFPLAKGRVVGD 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP-------P 168
R++C YHG+ + G C ++P+ ++ + +I + P E+ WIW GD P
Sbjct: 71 RLECGYHGFTFDQSGACTRIPTQEVIPSSCRIDAYPVVERWNWFWIWMGDPDKADESLIP 130
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA------KGWSV 222
I L P + A + L H L+ +NL DL+H F H G+ V
Sbjct: 131 DHDIVKLTDPDWLPVKAATHL-LKARHQLMHENLCDLSHLTFLHPGIIGVDAVADTGFDV 189
Query: 223 PSLVKFLTPASGL-----QGYWDPY-----PID----MEFRPPCMVLSTIGISKPGKLEG 268
+ A + G++ PID MEF PC+ L+ K +G
Sbjct: 190 SGEGMWYRDARAMYNQAPTGFFSDILDYHEPIDRLMSMEFYLPCLHLAEEVFLAHDKKDG 249
Query: 269 QNTRQCATH-LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 327
+ R+ T+ +H H P++ +T S +FA+ +V + + FA VL +D
Sbjct: 250 EPGRELGTYKVH--HAVTPATDHETHYFVAYSRNFATDDDNV--TEIINGAFA-AVLQQD 304
Query: 328 LRLVLGQQERMNNGAN 343
+ V +E + +
Sbjct: 305 VDAVETLEEMLQKSGD 320
>gi|414164011|ref|ZP_11420258.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
gi|410881791|gb|EKS29631.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
Length = 382
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 115
++N W+ + + D + + ++P V +R K G + CAH+ PL G +
Sbjct: 15 VENCWYMIGTAADFPAEKLTGHVVAKKPIVAWRTKHGQVVAYDDRCAHKRFPLSKGRLMQ 74
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTAT 171
+G ++C YHG Y GKC +PS + ++ P EQ+G+IW+WPG+ + T
Sbjct: 75 DGTLECAYHGLRYDMTGKCVMIPSHPTGPISPQAIVRPYPIVEQDGLIWLWPGNPALSGT 134
Query: 172 -IPCLLPPSGFEI-HAEIV--MELPIEHGLLLDNLLDLAH 207
P LP G E EI+ ME+P + LL++NLLD+ H
Sbjct: 135 RKPPRLPEVGSEDWKTEIIGPMEIPANYLLLIENLLDITH 174
>gi|330466146|ref|YP_004403889.1| oxidoreductase subunit alpha [Verrucosispora maris AB-18-032]
gi|328809117|gb|AEB43289.1| oxidoreductase subunit alpha [Verrucosispora maris AB-18-032]
Length = 347
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 35/277 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
++ W+ A+ +++ + ++ EP V++R G + + C HR PL ++
Sbjct: 5 RDQWYVAAYGSEVGRE-LLARTVLGEPLVLYRTGAGEAVALADRCVHRRYPLSESRLDGD 63
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT--ATIP 173
I C YHG+ Y G C +P Q R ++ + P EQ+ +W++ GD ATIP
Sbjct: 64 TIVCGYHGFTYDRTGSCVFVPGQQRIPRTARVAAYPVVEQDSFVWVFIGDRDRADPATIP 123
Query: 174 C---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TSTF 216
L P + + L +GLL+DNL+DL+H + H T+
Sbjct: 124 RAPWLTDPRYAVVRG--MAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEV 181
Query: 217 AKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL- 266
+ + + F ++G+QG + D+E+ PPC+ L I+ G
Sbjct: 182 DDERGIVYVSRHMDDAECPPFYARSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPQGVYP 240
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
Q A H ++ PS+ T + ++ DFA
Sbjct: 241 PAQGEDNEAFHAEIVYAITPSTEHTTYDFWAVARDFA 277
>gi|2271500|gb|AAC27107.1| vanillate demethylase [Acinetobacter sp. ADP1]
Length = 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 141/349 (40%), Gaps = 55/349 (15%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG +GK MP+ ++ K+ E+ G IW+WPG++ +
Sbjct: 62 GHLVCGYHGLVMGCEGKTIAMPAQRVGGFPCNKAYAVVEKYGFIWVWPGEK--SLANEAD 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
LP + H E + + ++ L++DNL+DL H + H+S+ + +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ-----KEIDEAL 174
Query: 231 PASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGI 260
P + + G +W D P+D F P V +G+
Sbjct: 175 PVTKVDGDHVVTERYMENIIAPPFWQMALRGNHLADDVPVDRWQRCHFFAPSNVHIEVGV 234
Query: 261 SKPGKLEGQNTRQCATHLHQLHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 319
+ G G N + L L + + P + + M+ +F P Q L
Sbjct: 235 AHAGH-GGYNAPKTRKSLQWLSIVVTPETETSHWYFWGMARNFQ------PENQQLTDQI 287
Query: 320 AE---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 365
E ++ EDL ++ QQ+ + L + D GV+ R D L
Sbjct: 288 REGQGKIFTEDLEMLEQQQQNIVRNPQRQLLMLNIDAGGVQSRKIIDRL 336
>gi|258542908|ref|YP_003188341.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384042829|ref|YP_005481573.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384051347|ref|YP_005478410.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384054454|ref|YP_005487548.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384057689|ref|YP_005490356.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384060330|ref|YP_005499458.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384063621|ref|YP_005484263.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384119631|ref|YP_005502255.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256633986|dbj|BAH99961.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256637046|dbj|BAI03015.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256640098|dbj|BAI06060.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256643155|dbj|BAI09110.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256646210|dbj|BAI12158.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256649262|dbj|BAI15203.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256652249|dbj|BAI18183.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655306|dbj|BAI21233.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 372
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 19 DQTCASPSTSKQ-SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP 77
DQT + S++++ +++ KGK+ + + S P ++W+PVA+S +LK +
Sbjct: 2 DQTAQTDSSTQELAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 78 FDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 137
P + R G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGTPIALVRPDAGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 138 P---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI---PCLLPPSGFEIHAEIVMEL 191
P +L N +++ PC EQ+GMI+++PGD P A I P L + +
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGD-PEKADIVPLPAHLARASNPAYKTRYFGT 169
Query: 192 PI--EHGLLLDNLLDLAHAPFTHTSTFAK 218
I + + +NL+D+ H F H+ +
Sbjct: 170 TIGCHYSFMHENLMDMNHQ-FMHSKQMGQ 197
>gi|421624090|ref|ZP_16064966.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
gi|408702121|gb|EKL47535.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
Length = 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|293608775|ref|ZP_06691078.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423331|ref|ZP_18913489.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-136]
gi|292829348|gb|EFF87710.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699884|gb|EKU69483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-136]
Length = 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVTGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALAEEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|434391889|ref|YP_007126836.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428263730|gb|AFZ29676.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 142/351 (40%), Gaps = 40/351 (11%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N L++ W+ LK MV EP V R ++G + N C HRA PL G
Sbjct: 4 NDFLRDVWYYALPGGSLKRGAMVAKTLLGEPIVFARSREGKVFALCNICPHRAVPLSCGR 63
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 166
+ I+C YHGW + G+C ++P S L+ ++K P E +G IWI+
Sbjct: 64 FDGQEIECCYHGWRFDQTGRCTEIPALVEGDSLDLKRFQVKQYPVREVQGNIWIYMASNE 123
Query: 167 ---PPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK- 218
PP + + P + ++V+ L ++H ++ L+D AH F H S + K
Sbjct: 124 RKAPPATDMEVPVVPFFGDKSYQLVVTLHFPCYVDHAII--GLMDPAHISFVHRSWWWKS 181
Query: 219 GWSVPSLVKFLTPASGLQGYWDPYPIDM-EFRPPCMVLS--TIGISKPG-----KLEGQN 270
G S+ VK P+ PY M + P + L IG P +L G
Sbjct: 182 GRSLFEEVKAFDPS--------PYGFTMRRHKIPNVALGYRLIGGGAPETEIAFRLPGVR 233
Query: 271 TRQCATHLH---QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 327
+T H L P S +T + + + P ++ R F L++D
Sbjct: 234 IEHVSTEHHNVCNLTAVTPLSETETEVTTLLYWTTPWITAIKPLIKPFVRAF----LDQD 289
Query: 328 LRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
++V+ QQE + + + + Y+L + A+ PF P+
Sbjct: 290 RQVVIKQQEGLKYDPTLLLIRDADTQARWYYQLKAEFTRAAAEGRPFNNPV 340
>gi|428209012|ref|YP_007093365.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010933|gb|AFY89496.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 351
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA S ++ + + + + I+RG DG +++ C HR L G V +
Sbjct: 21 NHWYAVARSREVTTNP-IAVTLWHQAIAIYRGNDGKVYALEDRCPHRQVKLSHGRVVDNN 79
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEP-PTATIP 173
++C YHGW + +G+C +P + +L N KI+ P EQ+G +W++PGD T P
Sbjct: 80 LECAYHGWRIAGNGECVDVPYLATNQKLPNCKIRHYPIREQDGFVWLFPGDRNLATQLQP 139
Query: 174 CLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
LP I ++E + L++NL+D+ H H + W+ P L
Sbjct: 140 LGLPEWDHLNYIATVSIIECAAHYSYLIENLMDMYHG---HLHQSWQAWADPIL 190
>gi|254430676|ref|ZP_05044379.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
gi|197625129|gb|EDY37688.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
Length = 464
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 135/340 (39%), Gaps = 46/340 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVN- 115
N W+ VA+ DL PF E+ V++ ++ C HR PL G +N
Sbjct: 4 NNQWYAVAYLDDLDRRRPTPFTLLEQDLVLWWDAAADTWRAFEDVCPHRLVPLSEGRLNG 63
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK---------SLPCFEQEGMIWIWPGDE 166
G ++CPYHGW + G+C +P + +LP +G+++++ G+
Sbjct: 64 RGELECPYHGWSFDGSGRCTAIPQADPDQAAVACSSARSRCTALPTATGQGLLFVFAGEP 123
Query: 167 PPTATIPCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
+P L P E + + +LP++ LL+N+LD++H PFTH T + +
Sbjct: 124 ERAPDVPLPLVPVLEEPDWLVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGRRENAA 183
Query: 224 SLVKFLTPASGLQGY---WDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNTRQ 273
+ +T A G G+ W P F PC++ + T +
Sbjct: 184 PVEATIT-AEGPDGFTAEWLEGPRRGRLGSQFTTFAAPCLMWHDL------------TAK 230
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLV 331
+ + P + RL R F SVL + F +H A + ED ++
Sbjct: 231 GFARILTVVYATPIRPGECRLFARFPFQFRSVLPRLLLRFRPRWLQHLANHTVLEDDQVF 290
Query: 332 LGQQERM---NNGANVWN----LPVGYDKLGVRYRLWRDA 364
L QER G+ ++ LP G D W D+
Sbjct: 291 LHWQERALARRGGSAAFSQACFLPTGSDVYVKALHAWVDS 330
>gi|418532825|ref|ZP_13098722.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450151|gb|EHN63206.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 359
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNT 101
++++ + P P + W+ F+ +LKD V +P V+FR DG +++
Sbjct: 6 QTMSATAPAFPLDQ-----WYVAGFAWELKDQP-VARTLLGQPVVLFRTADGRVAALEDR 59
Query: 102 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMI 159
C HR PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++
Sbjct: 60 CCHRELPLSCGTVEAAGLRCGYHGLLFSHEGQCLEIPGQERIPAKACVKSFELRERDQIL 119
Query: 160 WIWPGDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTH 212
WIW G P ++P PP+ + +H++ V + L+ DNLLDL+H + H
Sbjct: 120 WIWMGATPD--SVPDTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVH 176
Query: 213 TSTFA 217
T
Sbjct: 177 LKTIG 181
>gi|188989719|ref|YP_001901729.1| oxygenase subunit [Xanthomonas campestris pv. campestris str. B100]
gi|167731479|emb|CAP49654.1| oxygenase subunit [Xanthomonas campestris pv. campestris]
Length = 350
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKAMLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
S + + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 SADGAGVVCAYHGLRFGSGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSAAEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|428771008|ref|YP_007162798.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685287|gb|AFZ54754.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 468
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 25/309 (8%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRA 106
G P K W+PV F DL D F +E VI+ KD Q+ C HR
Sbjct: 21 GGEDPNKFDYKEVWYPVFFVNDLHKDKPSRFTLLDEDLVIWWDKKDQQWRVFQDMCPHRL 80
Query: 107 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGM 158
PL G ++E G ++CPYHGW +S G C+ +P + +KS P M
Sbjct: 81 APLSTGRIDEDGLLECPYHGWTFSGKGDCQSIPQQPEGENRHKSPRACVKSYPSAIAHDM 140
Query: 159 IWIWPGDE------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
++++ G + P T P + + I + ++P + LL+N+LD +H +TH
Sbjct: 141 LFVYAGKKENAFLTPMPITQPLIENVEKWTI-LKTFRDIPYDALTLLENVLDSSHVSYTH 199
Query: 213 TSTFA-KGWSVPSLVKFLTP-ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
T + + P ++ T G G+W P + ST I+
Sbjct: 200 HGTVGNRSNAAPVELEVKTADRQGFTGFWAEGPRKGKLGSQ----STTFIAPNLMWHDLT 255
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDL 328
++Q + ++V P S+ K R+ FAS + + + H + + ED
Sbjct: 256 SKQLGRTMTVVYVT-PISKGKCRVFALFPFQFASKIPQFFIKLTPQWYSHLNQNTILEDD 314
Query: 329 RLVLGQQER 337
++ L QER
Sbjct: 315 QIFLHYQER 323
>gi|333908973|ref|YP_004482559.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333478979|gb|AEF55640.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 364
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 131/333 (39%), Gaps = 36/333 (10%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S ++ + E +R D V + C HR L +G V +G
Sbjct: 8 KNAWYVAAMSEEVAGSKPLGRKICGESIAFYRSHDDQIAAVLDFCPHRGAALSIGYVEDG 67
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 174
+ C YHG + DGK + MP +++ +KS E+ G IW+WPG++ A IP
Sbjct: 68 LLVCGYHGLKMGADGKTKSMPLQRVQGFPCMKSYAVEERYGFIWVWPGEQSKADRALIPH 127
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK------ 227
L E + + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 128 LEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDESPVDTKVDGD 187
Query: 228 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK--L 266
F A G D +D F PP V+ +G++ G
Sbjct: 188 KVITSRFMENIMPPPFWQAALRGNGLADDVAVDRWQICRFSPPSHVMIDVGVAHAGHGGF 247
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
E N + ++ + + P S + M+ +F K + R + E
Sbjct: 248 EASNDHKASSTV--VDFITPESDTSIWYFWGMARNFNPEDKA---LTDNIREGQGAIFAE 302
Query: 327 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
DL ++ QQE + + L + D GV+ R
Sbjct: 303 DLEVLERQQENLLAFPDYDLLKLDIDAGGVQSR 335
>gi|427739261|ref|YP_007058805.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374302|gb|AFY58258.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 374
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N+W+P ++++LK ++P + ++R +DG +++ C H+ LH G V
Sbjct: 24 NYWYPATWASELKPSQVLPVVIWNSAIALYRSQDGQVHAIEDACPHKGVALHKGKVTGEN 83
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPG---------- 164
+ CPYHGWE++ +G C +P +L K +S E+ ++WI+PG
Sbjct: 84 LACPYHGWEFNGNGICTNIPYFPKDQKLPCAKARSYAVREKYNIVWIFPGAVEDSEKVEL 143
Query: 165 ------DEPPTATIPCLLPPSGFEIHAEIVME--LPIEHGLLLDNL 202
D+P IP P F+ H I E + + HG L +NL
Sbjct: 144 PSVPEYDDPNWLAIPI---PGEFKAHFSICNENTMDVFHGYLHENL 186
>gi|384429827|ref|YP_005639188.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341938931|gb|AEL09070.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 350
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
S + + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 SADGAGVVCAYHGLRFGSGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSAAEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|427739322|ref|YP_007058866.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374363|gb|AFY58319.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 340
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ ++FW+ VA S LK + ++ E IFRG+DG P +++ C HR L G V
Sbjct: 2 KFEDFWYVVALSNQLKPNKVLSRTILGEWLAIFRGEDGKPVALRDRCIHRNSRLSKGKVC 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+G+I+CPYHGW Y G+ K+PS Q + + + EQ+G I++ +P
Sbjct: 62 QGKIECPYHGWVYDNTGRVVKVPSQANNLCQSKMARCQLYQTKEQDGYIYVRLSSQPSEE 121
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P +P G+E +++ +N +D+ H H F
Sbjct: 122 FTPFKMPLYQQPGWET-VKVINRFNNNVTNCAENFIDVPHTASVHPGIF 169
>gi|425076775|ref|ZP_18479878.1| hypothetical protein HMPREF1305_02688 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425087408|ref|ZP_18490501.1| hypothetical protein HMPREF1307_02857 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405592484|gb|EKB65936.1| hypothetical protein HMPREF1305_02688 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405604132|gb|EKB77253.1| hypothetical protein HMPREF1307_02857 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 345
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDITG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPHETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|22299237|ref|NP_682484.1| Rieske 2Fe-2S family protein [Thermosynechococcus elongatus BP-1]
gi|22295419|dbj|BAC09246.1| Rieske 2Fe-2S family protein [Thermosynechococcus elongatus BP-1]
Length = 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 137/350 (39%), Gaps = 39/350 (11%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
N+ L+N W+ + DLK EP + R G P ++N C HR PLH G
Sbjct: 14 NSFLRNIWYYGLPAADLKPGRCQAKVLLGEPILFCRTTSGKPFALRNLCPHRGMPLHYGR 73
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWI-WPGD- 165
+ ++CPYHGW ++ G C +PS L+N + S P E +G +WI +P +
Sbjct: 74 FDGKEVECPYHGWRFNAHGHCTLIPSLTSDSDVDLKNFGVLSYPVREVQGNLWIFFPANG 133
Query: 166 ---EPPTATIPCLLPPSGFEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
PT +P L+P E + V + P + N +D +HAPF H + W
Sbjct: 134 RNVSEPTLEVP-LVPGFSAETQPQAVQKFIFPGHLDQVFINFMDPSHAPFVHGA-----W 187
Query: 221 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---------KLEGQNT 271
K A DP P R ++ + G +L G
Sbjct: 188 WWRKRGKLFEKAKTF----DPSPYGFTMRRHPLLRKSWAHHLLGGHPEVEIIYRLPGIRI 243
Query: 272 RQCATHLHQ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
+ H L P + ++T L F + P + L R F LN+DL
Sbjct: 244 ETNYSDRHTFCFLITLTPINDQETELTATYYWTFPWLAPLKPLLAPLAREF----LNQDL 299
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
R+V Q E + + + + Y+L R+ + ++ F+ P+
Sbjct: 300 RIVAKQSEGLKYKPPLTLIKEADYQAKWYYQLKREYEKATQEEREFVNPL 349
>gi|443316513|ref|ZP_21045954.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783877|gb|ELR93776.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 337
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ FW+PV L + F+ E V++ + G P V++ C HR L LG V++
Sbjct: 9 FRRFWYPVMPRQRLAEGPQT-FELLGESLVLWLDQQGQPAAVRDRCCHRTAKLSLGRVDQ 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
GRI CPYHGWE+ G C ++P + + ++ + C E+ G +W+ D P
Sbjct: 68 GRICCPYHGWEFDPSGACVRVPQLKADAAIPAHYRVAAYRCTERYGYVWVCLED--PLLD 125
Query: 172 IPCLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+P + + + E +++N LDLAH F HT TF
Sbjct: 126 VPQIDEAEDPNYRLIQEFYEPWQCAGLRVMENELDLAHPTFVHTETFG 173
>gi|87303595|ref|ZP_01086374.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
gi|87281819|gb|EAQ73783.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
Length = 457
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 34/307 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF---RGKDGIPG----CVQNTCAHRACPLH 110
+N W+PVAF DL F + V++ +G PG + C HR PL
Sbjct: 22 RNAWYPVAFLRDLDPARPTGFTLLGDDLVLWFDRKGDAAQPGGQWRAFADVCPHRLVPLS 81
Query: 111 LGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL------RNVKIKSLPCFEQEGMIWIWP 163
G +N G ++CPYHGW + G+C +P R ++ +GM++++
Sbjct: 82 EGRLNAAGELECPYHGWTFDGQGRCTAIPQASEGSQPSDRRSSCRAYATASGQGMLFVFA 141
Query: 164 GDEPPTATIPCLLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
G A +P L P E A + +LP + LL+N+LD++H PFTH +T +
Sbjct: 142 GAPEAAAAVPLPLVPVLEETEAGWLVQDTFRDLPYDALTLLENVLDVSHVPFTHHATVGR 201
Query: 219 GWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 276
+ + L A G G W+ P R + PG + T +
Sbjct: 202 RETAGPVDLRLEQAGPGGFSGVWEEGP-----RRGKLGSQFTTFLAPGLMWHDLTARGFA 256
Query: 277 HLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVLNEDLRLV 331
+ + P+ + RL R F S +L+ P Q+L +H + ED ++
Sbjct: 257 RILTVVYATPTRPGECRLFARFPFQFESSWPGRLLRLRP--QWL-QHIGNHTVLEDDQIF 313
Query: 332 LGQQERM 338
L QER+
Sbjct: 314 LHWQERV 320
>gi|428226501|ref|YP_007110598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Geitlerinema
sp. PCC 7407]
gi|427986402|gb|AFY67546.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geitlerinema sp. PCC
7407]
Length = 365
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 34/189 (17%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ V++S LK ++ +++ ++R +G +++ C H+ LH G V
Sbjct: 24 NHWYAVSWSDRLKPGQVIAVTVWQQAIAVYRDTEGNVHALEDACPHKGVALHKGLVLGQN 83
Query: 119 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+ C YHGWE+ + G+C K+ PS +L K +S P ++ ++WI+PGD T P
Sbjct: 84 LACRYHGWEFDSQGECAKIPYLPPSQKLPCAKARSYPICDRYNLLWIFPGDPALAETTPV 143
Query: 175 ------------LLPPSG-FEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
++P +G F+ H I E + + HG L +NL +G
Sbjct: 144 PHIAEFDQPGYLMVPVTGHFKAHFSICNENSMDVFHGFLHENL---------------QG 188
Query: 220 WSVPSLVKF 228
W P LVK
Sbjct: 189 WFDPQLVKL 197
>gi|329114531|ref|ZP_08243290.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
gi|326696011|gb|EGE47693.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
Length = 372
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 19 DQTCAS-PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP 77
DQT + ST +++ KGK+ + + S P ++W+PVA+S +LK +
Sbjct: 2 DQTAQTDSSTPALAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 78 FDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 137
P + R +G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGMPIALVRPDEGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 138 P---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
P +L N +++ PC EQ+GMI+++PGD T+P
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGDPEKADTVP 149
>gi|89056443|ref|YP_511894.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88865992|gb|ABD56869.1| vanillate demethylase subunit A [Jannaschia sp. CCS1]
Length = 340
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ A+S ++ D T+ P E V++R +DG P +++ C HR PL G++
Sbjct: 3 LKNCWYVAAWSHEI-DRTLQPQTFLGENVVLYRKQDGTPVALEDACPHRKLPLSDGALQG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHG + G C P+ + + +KS P ++ WIW GD P A
Sbjct: 62 DTVECGYHGLTFDCAGACVAAPTQKDAIPKRATVKSYPVVDRYRFTWIWMGD-PAEADPD 120
Query: 174 CLLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
+ P F+ V+++ + ++DNLLD +H + H ++FA G + + ++
Sbjct: 121 LIFPIPNFDDPTWGKTDGGVLDIDCNYLWVVDNLLDPSHVAWVHVTSFAGGGTDGAPLQV 180
Query: 229 LTPASGLQG----YWDP----YPIDMEFRPPCMVLSTIGISKPG 264
G+Q + +P Y + F+ PC L +++P
Sbjct: 181 DKTEHGVQVTRWIFGEPPSPYYENLLAFQGPCDRLQHYEMTRPA 224
>gi|108757336|ref|YP_635237.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461216|gb|ABF86401.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 376
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 28/198 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK+FW+ ST+LK + F V+FR G P +++ C HR L G+V
Sbjct: 15 LKDFWYVACLSTELKPGEPLARTLFGTGVVLFRDVQGQPTALRDRCLHRNARLSRGAVFN 74
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNV----------------KIKSLPCFE 154
GRI CPYHGW Y G ++PS ++L + ++ P E
Sbjct: 75 GRIGCPYHGWVYDASGAVVEVPSLGPSQRSELLDADACAREGLATAPCALGRLTRFPTLE 134
Query: 155 QEGMIWIWPGDEPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
Q+G+++++ G P + P +P G+ ++ +V P L++N +D+ H F
Sbjct: 135 QDGLVFVYMGGAEPARSAPFRVPYWDQEGWTVYF-MVTRFPNGVTNLVENFMDVPHTLFV 193
Query: 212 HTSTFAKGWS--VPSLVK 227
H F + S VP+ V+
Sbjct: 194 HPGWFRRPASKRVPATVR 211
>gi|340778645|ref|ZP_08698588.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
aceti NBRC 14818]
Length = 200
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNEG 117
+FW+PVA+S +K +P VI R DG P +++ CAHR PL G+V+
Sbjct: 46 DFWYPVAWSKKVKSGKAFATRFAGDPIVIVRPDDGSPIYALEDRCAHRQVPLSKGTVDGD 105
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW + G C +P V +K+ PC E+ G+I+I+PGD T+P
Sbjct: 106 VVRCCYHGWSFDRKGSCVTVPYLNKPGVGRGVKTYPCQERSGLIFIFPGDPELAKTVPVP 165
Query: 176 LPPSGFEIHAEIVMELPI---EHGLLLDNLLDLAH 207
+P + P+ + + +NL+D+ H
Sbjct: 166 VPCQADNPEFKTRHFDPLVNCHYSFMHENLMDMNH 200
>gi|114765025|ref|ZP_01444172.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
gi|114542572|gb|EAU45597.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
Length = 356
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 105/264 (39%), Gaps = 31/264 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +ST++ DD + F + V+FR DG +++ C HR PL G
Sbjct: 5 VKNAWYVAGWSTEI-DDELRRFTILGDNVVMFRKSDGAVAALEDRCPHRLLPLSKGKRIG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPG-----DEPPT 169
+QC YHG + G C ++P T L ++ + S P E+ G++WIW G DE
Sbjct: 64 DTVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVISYPIVEKHGIVWIWMGDPEKADEAQV 123
Query: 170 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 227
+P P+ H + + L + + +NL+D AH F H +T S VP V+
Sbjct: 124 FDMPEFSDPAWAAHHGD-ALHLKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQ 182
Query: 228 -------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
F G G D + PC + G + K
Sbjct: 183 TEGEAIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHY-YYLYTPCTAVIDFGSIETEKKCA 241
Query: 269 QNTRQCATHLHQLHVCLPSSRKKT 292
+ R + LH P + T
Sbjct: 242 EEDRGEGVRIFALHFMTPVTETYT 265
>gi|21229841|ref|NP_635758.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766718|ref|YP_241480.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111340|gb|AAM39682.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66572050|gb|AAY47460.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. 8004]
Length = 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVKH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|384429766|ref|YP_005639127.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341938870|gb|AEL09009.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVKH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|427704114|ref|YP_007047336.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347282|gb|AFY29995.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 335
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+NFW+ V + L+D V +++FR G + + CAHR L G V
Sbjct: 5 LENFWYAVEHAHGLRDQP-VSVTLLGRRYLLFRDTAGQAHALADYCAHRGASLARGWVEG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPGD-----E 166
++CPYHGW Y DG C ++P+ ++ + P EQ G +WI+PG+ E
Sbjct: 64 SCVRCPYHGWSYDVDGHCVRIPADPPGTAIPALARMATFPVREQSGFVWIFPGEAGRASE 123
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P P L P + ++++ LD +HAPF H F
Sbjct: 124 VPIPPFPELNQPGWRAVSGSYTWNAHFSR--VVESALDTSHAPFVHRPFFGN 173
>gi|21229775|ref|NP_635692.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766652|ref|YP_241414.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111267|gb|AAM39616.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66571984|gb|AAY47394.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. 8004]
Length = 350
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKAMLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
S + + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 SADGAGVVCAYHGLRFGAGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSAAEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|109897194|ref|YP_660449.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699475|gb|ABG39395.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 357
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 49 PVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACP 108
P + ++ ++N W+ AFST++ + M +P V++R +DG P + C HR P
Sbjct: 3 PFKYKSSIVRNRWYMAAFSTEITREPM-ERTMLNKPVVMYRKEDGTPVAMYGLCPHRYLP 61
Query: 109 LHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI--KSLPCFEQEGMIWIWPGDE 166
L G V I C YHG++++ G+C ++PS +I E+ + WIW GDE
Sbjct: 62 LVQGRVEGDAIVCGYHGFKFADTGECIQIPSQPKVTGRICQPVYKIIEKGPICWIWMGDE 121
Query: 167 PPTATIPCLLPPS--------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
L+PP G++ H+ L LL+DNL+DL H P+ H
Sbjct: 122 DKCDI--DLIPPYEDFGLDQPGWDFHSANYFHLEGRSQLLVDNLMDLTHLPYVH 173
>gi|329119536|ref|ZP_08248221.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464469|gb|EGF10769.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
bacilliformis ATCC BAA-1200]
Length = 346
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 131/337 (38%), Gaps = 19/337 (5%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
++ P QP L N+W+ A D++ F + +F G + + C HR
Sbjct: 1 MTTPEQPAADGLHNYWYITAREKDVRKKPQA-VRLFGRHYAVFHQGGGRYAALVDCCPHR 59
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWI 161
PL +G V G ++C YHGW + DG+ ++P+ +V++ ++ C Q+G +W+
Sbjct: 60 NVPLSIGKVENGCLKCAYHGWSFDGDGRLAEIPALCGCGGTPDVRVPAVHCTAQDGYVWL 119
Query: 162 WPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
G A +P CL + P++ L+N LD HA + H S F
Sbjct: 120 CIGTPATPAPLPFACLDEAGYTTFRMKTRFAAPVD--WCLENFLDCPHAVYVHNSWFRTP 177
Query: 220 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC----- 274
P A G Q + P + + S +S + T +
Sbjct: 178 TGKPVRALLRRNADGAQIEYANEPREKSLVWKLLQNSDTEMSHTDRFIAPATSRVDYRFS 237
Query: 275 -ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
H C P + T + +S F + P ++ +++ ++ ++ +D+ ++
Sbjct: 238 DGKHYIVTSSCTPLDKDTTEVHTVVSYKFGRL---NPLIRLVFQPLSQLIIRQDVAMMKQ 294
Query: 334 QQERMNN-GANVWNLPVGYDKLGVRYRLWRDALEKGA 369
Q++ ++ G D L WR L +G
Sbjct: 295 QRDNIDRFGGRARFCNSAADLLMPEITAWRKTLAEGG 331
>gi|312960146|ref|ZP_07774658.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285640|gb|EFQ64209.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 347
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ ++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGNEIKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++CPYHG E+ G C P + KIK+ P E+ ++WIW GD P
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKIKAYPLVERYSLLWIWMGD--PHLADA 121
Query: 174 CLLPPSGF--EIH---AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 ALIPDFNCMDEDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|445407257|ref|ZP_21432263.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
gi|444781031|gb|ELX04954.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
Length = 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPVQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|186472930|ref|YP_001860272.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184195262|gb|ACC73226.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 374
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S ++K EP V+ R + G +++ CAHR PL G V+
Sbjct: 31 DHWYPLAWSREVKRGKTHAVRFAGEPIVLARTESGKVIALEDRCAHRQVPLSGGVVDGEA 90
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
I+C YHGW Y GKC +P + +++ PC E EG+I+++PG T P L
Sbjct: 91 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRAYPCCESEGLIFVFPGKAELAETTP--L 148
Query: 177 PPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
PP G + E+ + + +NL+D+ H F H K
Sbjct: 149 PPLGSVANKAYKTRRFGREVACHYSFMHENLMDMNHQ-FLHRKQMGK 194
>gi|381162433|ref|ZP_09871663.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
gi|418460036|ref|ZP_13031143.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|359739937|gb|EHK88790.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|379254338|gb|EHY88264.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
Length = 377
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 125/325 (38%), Gaps = 59/325 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ A+ ++ + P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDHEVTTKKPLARTIAGVPLALWRNSEGRAVALADACWHRLAPLSKGKILGD 85
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 86 ELQCPYHGLRYNATGRCTAMPAQETINPSAMVPSYPVVERYRYVWVWVGD--PDLADPDT 143
Query: 176 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 218
+P G IHA+ + L+LDNL+DL H F H S+ +
Sbjct: 144 VPDMHQMDDPGWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHASSIGQEELSEA 197
Query: 219 ---------GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTI 258
+V ++ + P G +G D + I + F P + +
Sbjct: 198 EFDVVHEGNTVTVTRWMRDIDPPPFWLKNMRDKFPGFEGKVDRWQI-ITFEAPSTICIDV 256
Query: 259 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQY 314
G++K G + R + + ++ P + + + LD ++ +
Sbjct: 257 GVAKAGTGAPEGDRSQGVNGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQL----- 311
Query: 315 LWRHFAEQVLNEDLRLVLGQQERMN 339
R V ED ++ QQ+ ++
Sbjct: 312 --RQSVHGVFAEDEDMLRAQQDAID 334
>gi|298158512|gb|EFH99579.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 325
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 130/331 (39%), Gaps = 51/331 (15%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 145
V +R ++ +++ C HR PL LG V G++ C YHG DGK MP ++R
Sbjct: 2 VFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQLVCGYHGLVMGGDGKTAAMPGQRVRGF 61
Query: 146 KI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLL 199
K+ E+ G IW+WPGD P L+ + + E + + ++ L++
Sbjct: 62 PCNKTFAAVERYGFIWVWPGDREKAD--PALIHHLEWAVSDEWAYGGGLFHIQCDYRLMI 119
Query: 200 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG----------------YW---- 239
DNL+DL H + H S+ + + P + ++G +W
Sbjct: 120 DNLMDLTHETYVHASSIGQ-----KEIDEAAPVTTVEGEEVITARHMENIMPPPFWQMAL 174
Query: 240 ------DPYPIDM----EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSR 289
D P+D F PP VL +G++ GK + + P +
Sbjct: 175 RGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKGGYHAPHEFKASSIVVDFITPETD 234
Query: 290 KKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPV 349
+ M+ +F + + R ++ +EDL ++ QQ+ + L +
Sbjct: 235 TSIWYFWGMARNFNPADEQ---LTATIREGQRKIFSEDLEMLERQQQNLLQHPQRNLLKL 291
Query: 350 GYDKLGVRYRLWRDAL-----EKGAKQLPFM 375
D GV+ R + L A+Q+P M
Sbjct: 292 NIDAGGVQSRKILERLIAAERASTAEQIPVM 322
>gi|377807676|ref|YP_004978868.1| vanillate monooxygenase [Burkholderia sp. YI23]
gi|357938873|gb|AET92430.1| vanillate monooxygenase [Burkholderia sp. YI23]
Length = 351
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 124/314 (39%), Gaps = 47/314 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ A+++++ + P E + +R DG + C HR PL +G +
Sbjct: 12 LKNAWYVGAWASEVTR-ALTPRTILNEAVLFYRKTDGSAAAIGGICPHRFAPLSMGKLVG 70
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+QC YHG ++ GKC P + K+KS P E+ +IW+W G+ P
Sbjct: 71 DEVQCGYHGLQFDCSGKCTGTPIDKKVPAAAKVKSWPLVEKYNLIWLWMGE--PERADES 128
Query: 175 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH----------------- 212
L+P + + + V + + L++DNL DL H F H
Sbjct: 129 LIPDFSYLLDSNRKILSGVTHVKANYELIVDNLADLTHTHFLHGNFLHTEAVKQTQHQVM 188
Query: 213 ---TSTFAKGW----SVPSLV-KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 264
T+ +K W VP L+ K++ + W ++ + P + G + G
Sbjct: 189 QEGTTVHSKFWFPDGRVPPLMGKYMDDPELIVDRW----TEIRWDAPATIRLNAGATPTG 244
Query: 265 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 324
K + + THL P + T Y + F P L R + +
Sbjct: 245 KPREEGIQAYGTHL-----LTPETEHSTHYFYAHARSFKI---DDPATDVLVREWQQVAF 296
Query: 325 NEDLRLVLGQQERM 338
NE + ++ Q+++
Sbjct: 297 NEQDKPMIEAQQKI 310
>gi|294083911|ref|YP_003550668.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663483|gb|ADE38584.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L + W+ +S+D + ++ P E VIFR G+ +++ C HR PL G + +
Sbjct: 9 LFDSWYVAGWSSDFEH-SLTPLTILGEHVVIFRTAKGVAVALEDACPHRKLPLSHGRLQD 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
R++C YHG + G C P+ Q +V +KS P ++ G++WIW G P A
Sbjct: 68 DRVECGYHGLTFDCSGHCVHAPTQQNSPPDVSVKSYPVEDRYGLLWIWMG-APEAANTDE 126
Query: 175 LLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+ ++ A M++ + + DNLLD +H + H S+FA
Sbjct: 127 IFRIENYDNPAWGKTRGGSMDVACHYLYVTDNLLDPSHVAWVHVSSFA 174
>gi|221065066|ref|ZP_03541171.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|57116474|gb|AAW33716.1| IvaA [Comamonas testosteroni]
gi|220710089|gb|EED65457.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 359
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 43 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTC 102
+++ + P P + W+ F+ +LKD V +P V+FR +DG +++ C
Sbjct: 7 TMSAAAPAFPLDQ-----WYVAGFAWELKD-LPVARTLLGQPVVLFRTEDGRVAALEDRC 60
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIW 160
HR PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++W
Sbjct: 61 CHRELPLSCGTVEAAGLRCGYHGLLFSHEGQCLEIPGQERIPTKACVKSFELRERDQILW 120
Query: 161 IWPGDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHT 213
IW G P ++P PP+ + +H++ V + L+ DNLLDL+H + H
Sbjct: 121 IWMGATPD--SVPGTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHL 177
Query: 214 STFA 217
T
Sbjct: 178 KTIG 181
>gi|323530310|ref|YP_004232462.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323387312|gb|ADX59402.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 361
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 47/328 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A S+++ + + +EP V +R G + + C HR PL G + +
Sbjct: 4 LLNTWYVAALSSEVTANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVD 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----------VKIKSLPCFEQEGMIWIWPGDE 166
G ++CPYHG + DG+C P RN + + P E+ G +W WPGD
Sbjct: 64 GALECPYHGLRFGADGRCVFNPHGN-RNGNDTASPPARAQARHYPVRERYGAVWFWPGDP 122
Query: 167 PPTATIPC-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
A P L P F + + L DNLLDL+H + H T
Sbjct: 123 ERAAHTPLPAFHYLDPRENFTTGR--YLHTRANYQLSADNLLDLSHFQYLHPETLGSEQM 180
Query: 222 VPSLVK-----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIG 259
+V+ +L P + L G +D+ + PP ++ +
Sbjct: 181 ASGVVRATVAGDTVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVHWMPPGLLTIVVR 240
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 319
IS+ G E + A H P + + + L A + +
Sbjct: 241 ISESGLPETAREAKSA------HWLTPETAMSSHYFFAFGLPRAMGEHGAELVSRTAQSL 294
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNL 347
+ED+ ++ QQ RM + W+L
Sbjct: 295 LAPFRDEDIPMLEAQQ-RMMGERDFWSL 321
>gi|453330570|dbj|GAC87316.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+PVA+S +++ + +P + R +DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHEVQRGKTIGTRYAGQPIALVRPQDGSVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 176 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 222
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 223 PSLVK 227
P+LV+
Sbjct: 210 PTLVE 214
>gi|428312063|ref|YP_007123040.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253675|gb|AFZ19634.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 353
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA ST+++ + + +P V++R G +++ C HR L G V R
Sbjct: 21 NHWYVVARSTEVQTQPL-GVTLWHQPIVLYRDNSGGVHALEDRCPHRQVKLSHGCVIGDR 79
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHGW++ + G+C +P + +L N KI++ P EQ+G IW++PGD +
Sbjct: 80 LECHYHGWQFQSSGECAAVPYLAANQKLPNCKIRTYPVHEQDGFIWLFPGDVETLHS--A 137
Query: 175 LLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAHA 208
+ P G I V+E + L++NL+D+ H
Sbjct: 138 QIQPMGVPEWEHLNYIATVSVIECKAHYSYLIENLMDMYHG 178
>gi|407713671|ref|YP_006834236.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235855|gb|AFT86054.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 357
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T L+N W+ A+ +++ D + +E V+FR + + + C HR PL +G +
Sbjct: 2 TYLRNCWYVAAWDSEVLSDKPLARTLLDEKIVLFRDANNTAVALADRCPHRFAPLSMGEL 61
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT-- 169
+G ++C YHG ++ +DGKC P +++ P E+ +IWIW GD+
Sbjct: 62 CQGNVRCSYHGLQFGSDGKCVHNPHGNGIIPATAVVRAYPVVERYSVIWIWMGDKSKADD 121
Query: 170 ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
A IP L P + + A+ + + L DN++DL+H F H T
Sbjct: 122 ALIPEYRGLDPETAYV--AKDYLYAKANYVLETDNIMDLSHIEFLHPETLG 170
>gi|374316567|ref|YP_005062995.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
gi|359352211|gb|AEV29985.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
Length = 322
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ + S ++K + V+FR +G GCV + C HR L G +
Sbjct: 4 NQWYAILPSREVKRGALYAVKRVNLDLVLFRDAEGKLGCVVDQCPHRGAALSAGKLAGSH 63
Query: 119 IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD-EPPTAT 171
++CP+HG E+ T+G C ++P+ + +K P E G+I++W G+ E TA+
Sbjct: 64 VRCPFHGLEFDTEGNCRRIPANGNASKEDISRYNVKQYPVQELMGIIYLWFGESEKATAS 123
Query: 172 IPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+P + F ++E + ++N LD+ H P H +T KG
Sbjct: 124 VPFFHDQIDNSFS-YSEFPDHWNAHYSRCIENQLDVVHVPIVHYNTIGKG 172
>gi|308205532|gb|ADO19015.1| rieske (2Fe-2S) domain protein [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 336
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 57 LKNFWFPVAFSTDLKDD-TMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
LKNFW+ FS+ + D VP + +V++R + C HR L G +
Sbjct: 9 LKNFWYACEFSSVITDKPKRVPL--LSQQFVLYRNSQKQIVAFLDQCPHRGAALSNGWLE 66
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDE---- 166
I+CPYHGW+Y DG C ++P+ Q + ++ + P E+ G +W++ GD
Sbjct: 67 NDCIRCPYHGWKYQADGTCIEIPANQPGVPISKKARLITYPVQEKYGFVWLFWGDLPQRE 126
Query: 167 -PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
PP + P + PS + E + + L++N +D AH+ F H ++F G
Sbjct: 127 CPPLPSFPEVKDPSLRSVEFE--FKWNAHYTRLVENSIDPAHSAFVHANSFGSG 178
>gi|161522387|ref|YP_001585316.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189348737|ref|YP_001941933.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia multivorans ATCC 17616]
gi|160345940|gb|ABX19024.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338875|dbj|BAG47943.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia multivorans ATCC 17616]
Length = 370
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 23 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 82
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 141
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 142 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEH 195
+ +++ PC E G+I+++PGD P L S G++ E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRGYKTR-RFGREVKCHY 173
Query: 196 GLLLDNLLDLAHAPFTHTSTFAK 218
+ +NL+D+ H F H +
Sbjct: 174 SFMHENLMDMNHQ-FLHRKQMGQ 195
>gi|294651298|ref|ZP_06728621.1| vanillate O-demethylase oxygenase [Acinetobacter haemolyticus ATCC
19194]
gi|292822811|gb|EFF81691.1| vanillate O-demethylase oxygenase [Acinetobacter haemolyticus ATCC
19194]
Length = 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ ++ D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEILDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG DGK MP+ + K+ E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRTHGFPCNKAYAVIEKYGFIWIWPGEK--ALADESK 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWAEHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|239814693|ref|YP_002943603.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801270|gb|ACS18337.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 449
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 103
L GP +P L+ +W PVA +++ D + P E V+++ G G V C
Sbjct: 10 LTEVGPGKPMGDYLRRYWHPVAGASEFDDKAVKPLRILGEDLVLYKDLGGNYGLVDRRCP 69
Query: 104 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQ 155
HR + G V + ++C YHGW+Y G+C P + RN KIK+ P E+
Sbjct: 70 HRNADMSYGFVEQCGLRCSYHGWQYDQSGQCVHQPFEETLDPDARMRRNTKIKAYPVQEK 129
Query: 156 EGMIWIWPGDEPPTATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHA 208
G++W + G +P LLP +GF + E+P +N +D H
Sbjct: 130 AGLLWAYMGPQPAP-----LLPDWELFNFRNGFA--QAVFAEIPCNWFQCQENSIDPVHF 182
Query: 209 PFTHTS 214
+TH +
Sbjct: 183 EWTHNN 188
>gi|254418839|ref|ZP_05032563.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
gi|196185016|gb|EDX79992.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
Length = 376
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 50 VQPYNTR-LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACP 108
QP+ + + W+ VA S D+ + ++ EP +I R + G +++ C HRA P
Sbjct: 23 AQPFGKGFVADAWYFVALSRDVAPAGLKRYEIMGEPVLIGRTRAGAVYAMRDICPHRAAP 82
Query: 109 LHLGSV----NEGR-IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEG 157
L G + EG I+CPYHGW + DG C +PS + +K+++ P E +G
Sbjct: 83 LSAGKLVEKPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRAFPVRESQG 142
Query: 158 MIWIWPGDEPPTATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 210
M+++W + P PP SG ++ + + I+H ++ L+D AH P+
Sbjct: 143 MVFVWMASDARNPMEPDHEPPVFPGVVGSGPKLVEAMEFDSHIDHAVV--GLMDPAHGPY 200
Query: 211 TH 212
H
Sbjct: 201 VH 202
>gi|108757788|ref|YP_629242.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461668|gb|ABF86853.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 363
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N WF + S++L D + P V+FRG+ G P + + C HR PL LG V E
Sbjct: 22 LPNAWFILCASSELGDKPLA-RTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKE 80
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 170
G++QC YHGW + G+C +P R + EQ+G +W++ PG EP T
Sbjct: 81 GQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTE 140
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
L + + P L+N LD+ H + H F
Sbjct: 141 PYRFPLLEAREYTTVRRTLRAPGSLHSTLENTLDVPHTAYLHGGLF 186
>gi|440737591|ref|ZP_20917155.1| oxidoreductase subunit alpha [Pseudomonas fluorescens BRIP34879]
gi|440381947|gb|ELQ18460.1| oxidoreductase subunit alpha [Pseudomonas fluorescens BRIP34879]
Length = 346
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C E+ V +R +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDELAQKPLGRQICGEK-LVFYRDHTDQVRALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKAFAAVERHGFIWVWPGDQ--AQADPALI 120
Query: 177 P-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P S + + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 PHLEWADSEHWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP V+ +G++
Sbjct: 176 VTTVEGDEVVTARHMQNIMAPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVMIEVGVA 235
Query: 262 KPGK 265
GK
Sbjct: 236 HAGK 239
>gi|414341295|ref|YP_006982816.1| ring hydroxylating dioxygenase subunit alpha [Gluconobacter oxydans
H24]
gi|411026630|gb|AFV99884.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter oxydans
H24]
Length = 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+PVA+S +++ + +P + R +DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHEVQRGKTIGTRYAGQPIALVRPQDGSVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 176 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 222
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 223 PSLVK 227
P+LV+
Sbjct: 210 PTLVE 214
>gi|410943073|ref|ZP_11374814.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
frateurii NBRC 101659]
Length = 371
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+PVA+S +L+ + +P + R DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHELQRGKTIGTRYAGQPIALVRPLDGTVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 176 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 222
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 223 PSLVK 227
P+LV+
Sbjct: 210 PTLVE 214
>gi|407711022|ref|YP_006794886.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407239705|gb|AFT89903.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 361
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 47/328 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A S+++ + + +EP V +R G + + C HR PL G + +
Sbjct: 4 LLNTWYVAALSSEVAANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVD 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----------VKIKSLPCFEQEGMIWIWPGDE 166
G ++CPYHG + DG+C P RN + + P E+ G +W WPGD
Sbjct: 64 GALECPYHGLRFGADGRCVFNPHGN-RNGNDTASPPARAQARHYPVRERYGAVWFWPGDP 122
Query: 167 PPTATIPC-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
A P L P F + + L DNLLDL+H + H T
Sbjct: 123 ERAAHTPLPAFDYLDPRENFTTGR--YLHTRANYQLSADNLLDLSHFQYLHPETLGSEQM 180
Query: 222 VPSLVK-----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIG 259
+V+ +L P + L G +D+ + PP ++ +
Sbjct: 181 ASGVVRATVAGDSVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVHWMPPGLLTIVVR 240
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 319
IS+ G E + A H P + + + L A + +
Sbjct: 241 ISESGLPETAREAKSA------HWLTPETAMSSHYFFAFGLPRAMGEHGAELVSRTAQSL 294
Query: 320 AEQVLNEDLRLVLGQQERMNNGANVWNL 347
+ED+ ++ QQ RM + W+L
Sbjct: 295 LAPFRDEDIPMLEAQQ-RMMGERDFWSL 321
>gi|410686729|ref|YP_006963032.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|388482580|gb|AFK33102.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|403398307|gb|AFR43891.1| putative vanillate O-demethylase oxygenase chain A [uncultured
bacterium]
Length = 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+ A ++ ++ E+P V FR +G + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRQ-LLARTLLEQPVVFFRRNEGSVAALADRCSHRRVSLSLGRLIGD 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+QC YHG ++ DG C +P Q R + ++S P E++G +WIWPGD P
Sbjct: 63 EVQCGYHGLTFAGDGSCTSIPG-QSRVPPSACVRSYPVVERDGFVWIWPGD--PALANET 119
Query: 175 LLPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 215
L+P + + P E L+ ++N+LDL+H + H T
Sbjct: 120 LVPDYAEICSSGRYVGRPAEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|238894701|ref|YP_002919435.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402780814|ref|YP_006636360.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|238547017|dbj|BAH63368.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402541717|gb|AFQ65866.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|206575963|ref|YP_002238543.1| Rieske 2Fe-2S domain-containing protein [Klebsiella pneumoniae 342]
gi|288935529|ref|YP_003439588.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Klebsiella
variicola At-22]
gi|290509567|ref|ZP_06548938.1| vanillate monooxygenase [Klebsiella sp. 1_1_55]
gi|378978754|ref|YP_005226895.1| Rieske (2Fe-2S) domain-containing protein [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419763175|ref|ZP_14289419.1| Rieske (2Fe-2S) iron-sulfur domain protein [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|206565021|gb|ACI06797.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae 342]
gi|288890238|gb|ADC58556.1| Rieske (2Fe-2S) iron-sulphur domain protein [Klebsiella variicola
At-22]
gi|289778961|gb|EFD86958.1| vanillate monooxygenase [Klebsiella sp. 1_1_55]
gi|364518165|gb|AEW61293.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397743860|gb|EJK91074.1| Rieske (2Fe-2S) iron-sulfur domain protein [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDITG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|365141332|ref|ZP_09347136.1| hypothetical protein HMPREF1024_03167 [Klebsiella sp. 4_1_44FAA]
gi|419974429|ref|ZP_14489848.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419979949|ref|ZP_14495237.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419985376|ref|ZP_14500517.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419991036|ref|ZP_14506004.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419997165|ref|ZP_14511963.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420003374|ref|ZP_14518020.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420009022|ref|ZP_14523508.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420015354|ref|ZP_14529655.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420020652|ref|ZP_14534838.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420026028|ref|ZP_14540033.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420032105|ref|ZP_14545922.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420037639|ref|ZP_14551292.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420043536|ref|ZP_14557023.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420049252|ref|ZP_14562561.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420054838|ref|ZP_14568009.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420061104|ref|ZP_14574096.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420066770|ref|ZP_14579568.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420071265|ref|ZP_14583912.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420077309|ref|ZP_14589775.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420081737|ref|ZP_14594042.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421912736|ref|ZP_16342447.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421913900|ref|ZP_16343562.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|425081472|ref|ZP_18484569.1| hypothetical protein HMPREF1306_02220 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425091489|ref|ZP_18494574.1| hypothetical protein HMPREF1308_01749 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428149802|ref|ZP_18997614.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428932476|ref|ZP_19006053.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
JHCK1]
gi|428940702|ref|ZP_19013776.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
VA360]
gi|194399727|gb|ACF60811.1| HpxD [Klebsiella pneumoniae]
gi|363652905|gb|EHL91907.1| hypothetical protein HMPREF1024_03167 [Klebsiella sp. 4_1_44FAA]
gi|397345856|gb|EJJ38976.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397347459|gb|EJJ40566.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397351770|gb|EJJ44852.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397363434|gb|EJJ56074.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397364959|gb|EJJ57586.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397369742|gb|EJJ62341.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397376596|gb|EJJ68849.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397382477|gb|EJJ74638.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397387647|gb|EJJ79662.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397396089|gb|EJJ87784.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397398428|gb|EJJ90091.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397405204|gb|EJJ96675.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397413644|gb|EJK04856.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397413832|gb|EJK05038.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397422433|gb|EJK13402.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397429250|gb|EJK19969.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397431598|gb|EJK22270.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397440589|gb|EJK30991.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397446191|gb|EJK36414.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397452878|gb|EJK42943.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|405602902|gb|EKB76025.1| hypothetical protein HMPREF1306_02220 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405612548|gb|EKB85299.1| hypothetical protein HMPREF1308_01749 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410113356|emb|CCM85072.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410123734|emb|CCM86187.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426301783|gb|EKV64010.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
VA360]
gi|426307088|gb|EKV69177.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
JHCK1]
gi|427540228|emb|CCM93752.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|307725646|ref|YP_003908859.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586171|gb|ADN59568.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 356
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 47/353 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A S+++ + +EP V++R G + + C HR PL G + +
Sbjct: 4 LLNAWYVAALSSEVTAHAPLGRTLLDEPVVLYRTAGGEAVALADRCPHRFAPLSSGRIVD 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
G ++CPYHG + G C P R + + P E+ G +W WPGD P +
Sbjct: 64 GTLECPYHGLRFGAHGHCVFNPHGDGRVPARAQARRYPVHERYGAVWFWPGD--PQRALG 121
Query: 174 CLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
LP + +E + + L DNLLDL+H + H T +V+
Sbjct: 122 TPLPAFDYLDPRDHFTSERYLHTRANYQLSADNLLDLSHFQYLHPDTLGSEQMASGVVRA 181
Query: 229 LTPASG----------------------LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 266
L G +D+++ PP ++ + + + G
Sbjct: 182 TVAGDTVSVHREMKGELLRPMLTQSFELLYGERADRELDVQWMPPGLLTIAVRVCESGWP 241
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
E TR+ + H P + + + L A + + +E
Sbjct: 242 E--TTREAVS----AHWLTPETAASSHYFFAFGLPRAIGAHGAELVNRTAQSLLAPFRDE 295
Query: 327 DLRLVLGQQERMNNGANVWN-----LPVGYDKLGVRY---RLWRDALEKGAKQ 371
D+ ++ QQ RM + W+ LP+ L R RL D +G ++
Sbjct: 296 DIPMLEAQQ-RMIGERDFWSLRPAMLPIDAGALHARRIMERLIADEARQGGRE 347
>gi|449061481|ref|ZP_21738899.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
hvKP1]
gi|448873003|gb|EMB08127.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
hvKP1]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--WSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADSDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|294627521|ref|ZP_06706104.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598152|gb|EFF42306.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 350
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|423696632|ref|ZP_17671122.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003095|gb|EIK64422.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 347
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ T++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGTEVKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++CPYHG E+ G C P + K+K+ P E+ ++WIW GD P
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKVKAYPLAERYSLLWIWMGD--PHLADA 121
Query: 174 CLLPPSGF--EIH---AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 TLIPDFNCMDEDHWYVGKRYLHARANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|345855381|ref|ZP_08808110.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
zinciresistens K42]
gi|345633153|gb|EGX54931.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
zinciresistens K42]
Length = 397
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA S ++ +V E ++RG G +++ CAHR PL +G V
Sbjct: 35 DFWYPVARSRTVRRGKVVATAFAGERIALYRGTGGTVHALEDRCAHRQVPLSMGVVEGET 94
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + ++ P E G+++++PGD P A +
Sbjct: 95 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRGYPVREAYGLVFVFPGD-PELAAVTA 153
Query: 175 L--LPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
L LP G + + + + L +NLLD+ H F H K P L+ + T
Sbjct: 154 LPVLPAFGSPAYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVLGK--LRPELLGYRT 210
Query: 231 PASGLQGYW 239
A ++ +
Sbjct: 211 TARSVEARY 219
>gi|254415185|ref|ZP_05028947.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196177991|gb|EDX72993.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 353
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N+W+ VA++ +K ++P +++ ++R G ++N C H+ LH G V +
Sbjct: 24 NYWYSVAWANQIKPGQILPVKIWQQSIAVYRTPTGQLHALENACPHKGVELHKGIVQDEY 83
Query: 119 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+ CPYHGW++ GKC + P +L ++++ P E+ +IWI+PGD P C
Sbjct: 84 LACPYHGWQFDGAGKCVGIPYFPPEQKLPCAQVRTYPIQEKYKLIWIFPGD--PALATTC 141
Query: 175 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
LP P F + M+ + +N +D+ H F H + +GW P L +
Sbjct: 142 QLPDMPEFDHPDWFMVPVSARMK--SHFSICNENTMDVFHG-FLHQNL--QGWFDPVLKR 196
Query: 228 F 228
Sbjct: 197 L 197
>gi|428304442|ref|YP_007141267.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245977|gb|AFZ11757.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 441
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 143/345 (41%), Gaps = 60/345 (17%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVN--EG 117
W+P+A DL P V+++ V + C HR PL G V+ G
Sbjct: 12 WYPIAPLEDLDPKRPTPVTILGRRLVVWKPTVSEQYRVFLDQCPHRLAPLSEGRVDLETG 71
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 168
+ C YHGW+++ +G+C +P + N + +LP + G++W+W ++
Sbjct: 72 NLMCSYHGWQFNPEGECTHIPQAENPDLIAKNKDNFCVVTLPIQQINGLLWVWLDEKSAD 131
Query: 169 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------- 215
A+ P L PS GF + + +V +L + L++N+ D +H PF+H
Sbjct: 132 LAASTPLPLSPSIDASKGF-VWSSMVRDLEYDWQTLVENVADPSHVPFSHHGVQGNRKQA 190
Query: 216 ----FAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 271
S P L++ A+ +G + + F PPC +LE
Sbjct: 191 KPIAMEIAQSTPDLIE----ATLSRG----FATRITFEPPC------------RLEYAME 230
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLR 329
+ C+P S K+R++ + +FA L HV + W H + VL+ D+
Sbjct: 231 FPGGKKFGLVVYCVPVSPGKSRIVGQFPRNFAKTLHHV--IPRWWDHIQNRNLVLDGDMV 288
Query: 330 LVLGQQERM------NNGANVWNLPVGYDKLGVRYRLWRDALEKG 368
L+ Q+ R+ + + +P D L + +R W D +G
Sbjct: 289 LLHYQEHRLQEYESTQSWKTAYKMPTSADLLVIEFRRWFDKYCQG 333
>gi|330006269|ref|ZP_08305574.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|328535920|gb|EGF62345.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDITG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|294667820|ref|ZP_06733030.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602446|gb|EFF45887.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 350
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|405355684|ref|ZP_11024859.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397091391|gb|EJJ22209.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 366
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N WF + S++L D + P V+FRG+ G P + + C HR PL LG V E
Sbjct: 25 LPNAWFILCASSELGDKPLA-RTLQGSPLVLFRGEGGKPATLVDRCPHRNVPLSLGRVKE 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 170
G++QC YHGW + G+C +P R + EQ+G +W++ PG EP T
Sbjct: 84 GQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTE 143
Query: 171 TIPCLLPPSGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P P ++ + ++ P L+N LD+ H + H F
Sbjct: 144 --PYRFPLLEAREYSTVRRMLRAPGSLHATLENTLDVPHTAYLHGGLF 189
>gi|260557454|ref|ZP_05829669.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|260409080|gb|EEX02383.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|452953922|gb|EME59331.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii MSP4-16]
Length = 358
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPVQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIHCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421172490|ref|ZP_15630260.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
gi|404537756|gb|EKA47339.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
Length = 361
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A S +LKD V +P V+FR DG +++ C HRA PL G++ E
Sbjct: 29 NQWYVAALSWELKDKP-VGRTLLNKPVVLFRMGDGQVAALEDRCCHRALPLSNGTLEEAG 87
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHG ++ GKC ++P K+ + E++ ++WIW G + A+ P
Sbjct: 88 VRCGYHGLLFNQAGKCVEIPGQDKIPSKAKVPAYHVRERDQIVWIWFGAD--AASEPDCE 145
Query: 177 PPSGFEIHA--EIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFA 217
PP+ +E+H+ + V + + H L+ DNL+DL+H + H T
Sbjct: 146 PPA-YEVHSSGKYVFDGSVYHYDAPYQLIHDNLMDLSHLGYVHLKTIG 192
>gi|381173066|ref|ZP_09882176.1| Rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|418518068|ref|ZP_13084221.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520106|ref|ZP_13086156.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|380686498|emb|CCG38663.1| Rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410704060|gb|EKQ62545.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705218|gb|EKQ63696.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 350
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|428305773|ref|YP_007142598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428247308|gb|AFZ13088.1| Rieske (2Fe-2S) iron-sulfur domain protein [Crinalium epipsammum
PCC 9333]
Length = 340
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ ++FW+ VA ST+LK + ++ E IFRG DG +++ C HR L G V
Sbjct: 2 KFEDFWYVVALSTELKPNKVLSCTVLGEWLAIFRGDDGKSVALRDRCMHRNSRLSRGKVC 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+G +QCPYHGW Y +GK +P+ L + + K EQ+G +++ D+P
Sbjct: 62 QGNLQCPYHGWVYDKNGKVVAVPAEGDNFKMLDSRQAKLYQTKEQDGYVYVRLTDQPSEE 121
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLL---DNLLDLAHAPFTHTSTF 216
P +P G E E V + H + +N +D+ H H F
Sbjct: 122 FEPFKMPYYG-EPGWETVRVINRFHNNVTNCAENFIDIPHTASVHPGVF 169
>gi|388547303|ref|ZP_10150569.1| oxidoreductase subunit alpha [Pseudomonas sp. M47T1]
gi|388274547|gb|EIK94143.1| oxidoreductase subunit alpha [Pseudomonas sp. M47T1]
Length = 352
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ + + C E+ V +RG G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEKI-VFYRGPHGRVAAVEDFCPHRGAPLSLGYVESG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQ--KIADPELI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + E + + ++ L++DNL+DL H + H ++ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHATSIGQ-----KEIDEAAP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ +Q +W D P+D F PP VL +G++
Sbjct: 176 ITRVQDDEVITARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 262 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 321
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAAPQYKAASIVVDFITPETDTSIWYFWGMARNFNP---HDETLTASIREGQG 292
Query: 322 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLTMLEQQQKNLLANPERNLLKLNIDAGGVQSR 330
>gi|220908321|ref|YP_002483632.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
gi|219864932|gb|ACL45271.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
Length = 477
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 134/341 (39%), Gaps = 32/341 (9%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 105
+G P W+PV + DL PF + V++ + + C HR
Sbjct: 20 AGGSDPDRFNWHEAWYPVHYVVDLDRTQPTPFTLLGQDLVLWWDRQAESWRAFADQCPHR 79
Query: 106 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 157
PL G + E G ++CPYHGW ++ +G+C+++P + + + S P ++G
Sbjct: 80 LAPLSEGRIAEDGLLECPYHGWAFTGEGQCDRIPQQFPGQMAHTSKRACVTSFPTTVRQG 139
Query: 158 MIWIWPGDEPPTATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
+++++ GD P A + + E + +LP + LL+N+LD +H PFT
Sbjct: 140 LLFVYAGD-PANADRVSVPIIAALEESPQDWVCLNTFRDLPYDALTLLENVLDSSHVPFT 198
Query: 212 HTSTFA-KGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 269
H + + + P + L G QG+W D R +T I+
Sbjct: 199 HHRSVGNRANAAPVELDMLEFGKQGFQGFWQ----DGPRRGTLGSQTTTFIAPALMWHDL 254
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNED 327
T+Q L ++ P + + RL R F S L + + H + ED
Sbjct: 255 TTKQFGRTLTAVYAT-PIRKGECRLFARFPFKFGSRLPALLIKLTPRWYAHIGNNNVLED 313
Query: 328 LRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
++ L QER N A LP D R W
Sbjct: 314 DQIFLHLQERYLEAQGGSANFAKACYLPTRADTYVTALRKW 354
>gi|148555200|ref|YP_001262782.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500390|gb|ABQ68644.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 367
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+S ++ D+ ++ E +++R + G NTC HR PLHLG V
Sbjct: 4 LRNAWYVAAWSDEVSDN-LLTRRILNEQVLLYRTEAGELVATANTCPHRFAPLHLGKVVG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGD--EPPTAT 171
I+CPYHG ++ +G+C P R ++++ P E+ G WIW GD A
Sbjct: 63 DAIECPYHGLRFNGEGRCVFNPDGDGRIPAGARLRTYPITERLGAAWIWMGDPARADLAM 122
Query: 172 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
IP L PS + V+ + + + DNL+D AH H ++ A
Sbjct: 123 IPDFEFLEDPSYRTVKG--VLHVRANYRYINDNLMDEAHLHMVHHNSLA 169
>gi|374573646|ref|ZP_09646742.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
gi|374421967|gb|EHR01500.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
Length = 353
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 112/292 (38%), Gaps = 50/292 (17%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN- 144
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 145 -VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 192
+++ P E+ IW+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYIWLWMGD--PALADPALVPDLHWNHDPAWAGDGKTIHVN------ 145
Query: 193 IEHGLLLDNLLDLAHAPFTHTSTFA------------------------KGWSVPSL-VK 227
++ L+LDNL+DL H F H S+ +G P K
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 228 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 287
L G G D + I + F PC + +G++ G + R + L+ P
Sbjct: 206 QLGKEPGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPE 264
Query: 288 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 339
+ K + ++ + + R + +ED ++ QQ M+
Sbjct: 265 TEKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 313
>gi|78045876|ref|YP_362051.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|346723235|ref|YP_004849904.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|78034306|emb|CAJ21951.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|346647982|gb|AEO40606.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 350
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLARHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPARMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVAPDFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHATRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|336250321|ref|YP_004594031.1| (hypo)xanthine hydroxylase [Enterobacter aerogenes KCTC 2190]
gi|334736377|gb|AEG98752.1| (hypo)xanthine hydroxylase [Enterobacter aerogenes KCTC 2190]
Length = 345
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 139/343 (40%), Gaps = 48/343 (13%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA S D+ V +E VI+R + + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARSADIGPQP-VKATLLDEKLVIYRLHERV-VVARDVCPHRGVPLTLGFHD 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCFEQE---GMIWI---WPGDEPP 168
E I CPYHG + DG+C ++PS+ + + K +L C+ E G++W+ + D PP
Sbjct: 79 EEGIICPYHGLRFGEDGRCNRIPSSPNQPIPAKLNLTCYAAEEHYGLVWVCLDYDADNPP 138
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLV 226
GF+ E+ G ++ LD+AH + HT TF A+ VP +
Sbjct: 139 RLPTMPHWADDGFQQLTCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADAENQQVPDYL 198
Query: 227 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 271
T + YW YP +R P +T+ I PG+
Sbjct: 199 PEETENGFVVDYWSTVGNYPASAGYRAPEGFQWLRRFEMHLPFTATLTIHFPGE------ 252
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEVY--AFNLRVFEEDRLMV 303
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
Q+ + D+ + YR +G K+L F
Sbjct: 304 ESQRPETLPLDLTLEAHIPADRSSIAYR-------RGLKRLGF 339
>gi|46204241|ref|ZP_00050278.2| COG4638: Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 361
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 138/346 (39%), Gaps = 41/346 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ V + + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LPNAWYCVGPAASVAGGKMRAVALNGEQVVLGRAKDGALFALRDRCPHRGMALSKGKFDG 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CP+HGW + TDG+C +P ++ + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSEHDASDFSCIAVQRFPIVESAGFLWVNPHLGPSDL 143
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTHTS-TFAKGWSVPSLVK 227
+P GFE +V+EL +E L +L+D H F H + F + VK
Sbjct: 144 EAVPAVPSLGFEPAGSLVLELEVEASFDLTTLSLVDPGHVAFVHDNWWFRASKELREKVK 203
Query: 228 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
P +S L P +++EFR P + L I T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPLYRLLGGAPEVEIEFRLPGVRLERI---------AAGTK 254
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q ++ + L G +RL R+ LE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKRETLEAAREGRPFANPL 352
>gi|447916147|ref|YP_007396715.1| oxidoreductase subunit alpha [Pseudomonas poae RE*1-1-14]
gi|445200010|gb|AGE25219.1| oxidoreductase subunit alpha [Pseudomonas poae RE*1-1-14]
Length = 346
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ +L + C E+ V +R +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDELAHKPLGRQICGEK-LVFYRDHTDQVRALEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKAFAAVERHGFIWVWPGDQ--AQADPALI 120
Query: 177 P-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
P S + + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 PHLEWADSEHWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 232 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 261
+ ++G +W D P+D F PP V+ +G++
Sbjct: 176 VTTVEGDEVVTARHMQNIMAPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVMIEVGVA 235
Query: 262 KPGK 265
GK
Sbjct: 236 HAGK 239
>gi|320160752|ref|YP_004173976.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994605|dbj|BAJ63376.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 327
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+ V S +++ V E V +R KDG C+ + C H L G V E
Sbjct: 2 IPNQWYVVLESREVRVGRPVGAVRMGEKMVFWRRKDGKVVCMADRCPHLGASLSRGKVVE 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
+ CP+H +E+ G C +P+ + ++IKS P +E G IWI+ G EP
Sbjct: 62 DHLACPFHAFEFDPGGACVYIPALGRNTPPPKAMRIKSYPTYEAHGFIWIYWG-EPQGE- 119
Query: 172 IPCLLPPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
LLPP F+I +A P+ + +++N LD+ H P HT T +G V
Sbjct: 120 ---LLPPKFFDIDETFSYAGYRQLWPVHYSRMVENQLDVMHLPHVHTDTIGRGRKV 172
>gi|50084184|ref|YP_045694.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. ADP1]
gi|49530160|emb|CAG67872.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ADP1]
Length = 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 175
G + C YHG +GK MP+ ++ K+ E+ G IW+WPG++ +
Sbjct: 62 GHLVCGYHGLVMGCEGKTIAMPAQRVGGFPCNKAYAVVEKYGFIWVWPGEK--SLANEAD 119
Query: 176 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|386034793|ref|YP_005954706.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
KCTC 2242]
gi|424830593|ref|ZP_18255321.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339761921|gb|AEJ98141.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
KCTC 2242]
gi|414708021|emb|CCN29725.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 345
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSRPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ +E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPALEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAPDGFQWLRHFEMHLPFTATLTIHFPADAKLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|168000935|ref|XP_001753171.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695870|gb|EDQ82212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 44/346 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 118
W+PVA DL ++ P P I+ K V + C HR PL GS++E G
Sbjct: 25 WYPVAVERDLDKNSPHPATILGRPLAIWWDKSTSKWQVYDDQCPHRLAPLSEGSISEEGH 84
Query: 119 IQCPYHGWEYSTD-GKCEKMPST--------QLRNVKIKSLPCFEQEGMIWIW------- 162
++C YHGW + D G+C +P + + + P EQ+G++W W
Sbjct: 85 LRCSYHGWTFKGDSGECTGIPQAPKDGKQRHRSKRACVSVYPSMEQQGILWFWSDLSQGP 144
Query: 163 ----PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
PP P G++I + +L + L++NL+D AH F H
Sbjct: 145 VNIEAAANPPPVFSELSDPDFGYDIS---LRDLEYSYETLIENLMDPAHVNFAHHKIQGN 201
Query: 219 GWSVPSLVKFLTPASGLQGYWDPYPIDME-FRPPCMVLSTIGISKPGKL-----EGQNTR 272
S L +T G+ +E F PP L + K N+
Sbjct: 202 RKSAEPLNFTITTKIAPSGFKGEDEKSVETFIPPVSFLLQFTLGGNNKQHIPVSHALNSE 261
Query: 273 QCAT---HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV--PFMQYLWRHFAEQVLNED 327
+ AT + L +C+P S K+RL++ +FA+ L + P++ ++ + VL+ D
Sbjct: 262 KKATKPKKVSLLFLCIPVSPGKSRLIWSFPRNFATFLFKITPPWVLHMTNNL---VLDSD 318
Query: 328 LRLVLGQQERMN-NGANVW----NLPVGYDKLGVRYRLWRDALEKG 368
+ L+ + R+ G W +P D +R W + G
Sbjct: 319 MYLLHLLERRLQVEGPENWFKRAYIPTTADAYVAGFRRWLNDFAGG 364
>gi|188989785|ref|YP_001901795.1| oxygenase subunit [Xanthomonas campestris pv. campestris str. B100]
gi|167731545|emb|CAP49720.1| oxygenase subunit [Xanthomonas campestris pv. campestris]
Length = 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA+ +++ + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVRH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 175 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|424933470|ref|ZP_18351842.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|407807657|gb|EKF78908.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
Length = 345
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 24/299 (8%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHE 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP--CMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
TP + YW YP +FR P L + P L
Sbjct: 198 SPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLPFTATLTIHFPADARLVI 257
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERM 338
++ P S + TR+ ++ +F HVP F +V ED +V Q+ ER+
Sbjct: 258 MNAASPVSSRVTRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVETQRPERL 311
>gi|357394269|ref|YP_004909110.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
gi|311900746|dbj|BAJ33154.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
Length = 342
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE 116
+N W+ A++ ++ DD ++ EP V++R +DG + + C HR PL
Sbjct: 6 RNQWYVAAYAAEVGDD-LLGRTVLGEPVVLYRSAEDGRAIALADRCVHRRFPLSESRREG 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 171
I C YHG+ Y G C +P R ++ + P EQ+ ++WIW GD P A
Sbjct: 65 DAIICGYHGFTYDRTGACVSVPGQTRVPRTARVAAYPVVEQDSLVWIWIGD-PAAADASR 123
Query: 172 ---IPCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH 212
P L P+ + ME + ++GLL+DNLLDL+H + H
Sbjct: 124 VPRAPHLADPAMTTVRG---MEPIDADYGLLVDNLLDLSHETYLH 165
>gi|419960669|ref|ZP_14476684.1| vanillate monooxygenase oxygenase subunit [Rhodococcus opacus M213]
gi|414573890|gb|EKT84568.1| vanillate monooxygenase oxygenase subunit [Rhodococcus opacus M213]
Length = 357
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIADPQNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|33861365|ref|NP_892926.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633942|emb|CAE19267.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 440
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 30/302 (9%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ + ST+LK + + F F+EP ++FR K+ C++N C HR + GS++ G +
Sbjct: 48 WYAICPSTELKKNKIHYFSLFDEPLLLFRDKNNNVRCIKNICPHRGSSFYGGSISNGELT 107
Query: 121 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 168
CPYHG +S+ G C+ + + + + E+E I+I+ D+
Sbjct: 108 CPYHGARFSSQGNCQNIDRITCSHIVDNNYDNYAKRIHLSQFKVVERESYIFIYFTDKSE 167
Query: 169 T--------ATIPCL-LPPSGFEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTST 215
T + I L +GF + E++++ + +++N LD+ H + H T
Sbjct: 168 TDLNKFNDDSLISNYDLTANGFSVKDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDT 227
Query: 216 F-AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
K + LV F + Y + I P I PG++
Sbjct: 228 IPDKDVNKNVLVSFNQKININPNYIE--SIYFYKNNPTKEFIRIKYIPPGRILIYKGDPA 285
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDF--ASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
A+ Q+ +P K R++ R F L ++ + + + ++ +ED ++
Sbjct: 286 ASRYVQVLDHIPLGDNKARVIVRHYRKFLKNKFLNNLILFKEIQKKIFYKIFDEDYMILK 345
Query: 333 GQ 334
Q
Sbjct: 346 TQ 347
>gi|325920841|ref|ZP_08182740.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
gardneri ATCC 19865]
gi|325548677|gb|EGD19632.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
gardneri ATCC 19865]
Length = 350
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 134/336 (39%), Gaps = 52/336 (15%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
RL W VA S+++ PF +E V++R D + ++ C HR PL +G+
Sbjct: 21 RLAQHWHAVALSSEVG---QAPFKATLLDESLVLYRLGDELVAA-RDVCPHRGVPLSMGT 76
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPT 169
+ G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 77 ADGGGVVCAYHGLRFGAGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLSKPAGV 136
Query: 170 ATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWS 221
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 137 SEAEVQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKRE 196
Query: 222 VPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKP 263
VP+ TP Y Y +DM E P TI P
Sbjct: 197 VPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPSFQWLRHFEVHLPFTATLTIHFPVP 256
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
GK L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 257 GK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRV 300
Query: 324 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
ED +V Q+ + + + D+ + YR
Sbjct: 301 FEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|264677972|ref|YP_003277879.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262208485|gb|ACY32583.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 354
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A S++L D V E V+FR DG +++ C HRA PL G+V
Sbjct: 23 NQWYVAAHSSELADKP-VGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCG 81
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQE--GMIWIWPGDEPPTATIPCLL 176
++C YHG Y+ +GKC ++P + K K L QE G+IWIW G +P C
Sbjct: 82 LRCGYHGLLYNHEGKCVEIPGQEKIPSKAKVLAYHVQERDGLIWIWFG-KPENPEPMCDA 140
Query: 177 PPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFA 217
P E V + H L+ DNLLDL+H + H T
Sbjct: 141 PSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHTIG 186
>gi|254512627|ref|ZP_05124693.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
gi|221532626|gb|EEE35621.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 57 LKNFWFPVAFSTD----LKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
L+N W+ A+S D LK +T + +E V++R +DG P +++ C HR PL G
Sbjct: 3 LRNCWYVAAWSKDIGRALKAETFL-----DENIVLYRQEDGTPVALEDACPHRKLPLSKG 57
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT 169
++ ++C YHG + GKC P+ + R ++S P ++ ++WIW GD P
Sbjct: 58 NLKGDLVECGYHGLTFDCSGKCIDSPTQRGMTPRRAVVRSYPVVDRYRLLWIWMGD-PEL 116
Query: 170 ATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
A + P F+ + M++ + + DNLLD +H + H S+FA
Sbjct: 117 ADPDKIFPIENFDNPGWGLTDGGAMDIDCHYLWVCDNLLDPSHVAWVHVSSFA 169
>gi|334345778|ref|YP_004554330.1| Rieske (2Fe-2S) domain-containing protein [Sphingobium
chlorophenolicum L-1]
gi|334102400|gb|AEG49824.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sphingobium
chlorophenolicum L-1]
Length = 351
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L W+ A ST++ + + + +I+R DG + + C HR PL LG +
Sbjct: 8 LMKAWYAAALSTEVDGEQLFHRKILGKSVLIYRTADGKAVAMHDRCPHRFAPLSLGKRDG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 172
+I CPYH +++ G+C P + ++ + P E+ G +WIW EP + +
Sbjct: 68 DQISCPYHALKFNAQGQCTHNPHGNGHIPKAAQVDTFPIEERYGFLWIWMDPSEPDLSLL 127
Query: 173 PCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 226
P P P+ A M LP+ + L++DN++DL+H H +G P +
Sbjct: 128 PDYSPLDIGHPNAL---AHTYMHLPVNYELIIDNVMDLSHIDHVHGEIITTRGKLSPIVP 184
Query: 227 KFLTPASGLQGYWD--PYPIDMEFRP-------PCMVLSTIGISKPGKL-------EGQN 270
A + W+ P M F P I S P + + +
Sbjct: 185 TLRETARNISARWEWSQQPAMMIFAPFLARAGDEAKQFFDITWSAPANIQLTVAAVQDSD 244
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLY 296
+ A + LH C P+ T +
Sbjct: 245 SFDDALDQYDLHTCTPAGPFSTHYFF 270
>gi|432333907|ref|ZP_19585642.1| vanillate monooxygenase oxygenase subunit [Rhodococcus
wratislaviensis IFP 2016]
gi|430779174|gb|ELB94362.1| vanillate monooxygenase oxygenase subunit [Rhodococcus
wratislaviensis IFP 2016]
Length = 393
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 38 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 96
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 97 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIADPQNP 156
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 157 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 216
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 217 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 275
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 276 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 320
>gi|333907699|ref|YP_004481285.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333477705|gb|AEF54366.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 344
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ +S DL D + EP VI+RG+DG +++ C HR PL G V
Sbjct: 4 LRNTWYCAGWSQDLLDKPLA-ITLLNEPVVIYRGEDGTAIALEDRCPHRFAPLSKGKVQG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEP---PTA 170
I C YHG + G P + +K P E +G+IWIW G+ P +
Sbjct: 63 NNIACGYHGLVFDAKGNGTYNPHGNGAIPKGCSVKYYPVIEAQGVIWIWMGEASQADPAS 122
Query: 171 TI---PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
I C +H + ++ E L+ DNLLDL+H P+ H+
Sbjct: 123 IIDIGECDKREGWTSVHGYLNVKCHYE--LVADNLLDLSHVPYLHS 166
>gi|388544418|ref|ZP_10147706.1| vanillate demethylase oxygenase subunit [Pseudomonas sp. M47T1]
gi|388277601|gb|EIK97175.1| vanillate demethylase oxygenase subunit [Pseudomonas sp. M47T1]
Length = 364
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 73 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 132
D + P +P+V FR + G + + C HR L G + +QCPYHGW +S DG
Sbjct: 10 DGLSPVQLLGQPFVAFRDEHGQARLLSDVCVHRGGSLSAGGKVDASVQCPYHGWRFSADG 69
Query: 133 KCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGD-----EPPTATIPCLLPPSGFEI 183
C +P+ + ++ + P E+ G IW + GD PP + + P+ +
Sbjct: 70 VCTHIPAQPHARIPLKARVDAYPTVERHGWIWAFLGDLPEAERPPLPALDWVDDPAVRVV 129
Query: 184 HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+ + +++N LD AHAPF H +TF
Sbjct: 130 SGHFDWDASWDR--VMENGLDFAHAPFVHGTTFG 161
>gi|319782309|ref|YP_004141785.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168197|gb|ADV11735.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 346
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ ++ D +VP E V++R DG+ +++ C HR PL +G +
Sbjct: 3 LRNCWYVAAWDHEVAD-RLVPTRILGEDIVLYRRTDGVVAALEDACPHRKLPLSMGRIKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ-LRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG + + G C ++P + + +V ++S P E+ G++WIW G+ P
Sbjct: 62 DTVECGYHGLTFDSTGTCTRVPGAEKIPHVACVRSYPIAERYGLLWIWMGEAAKAD--PA 119
Query: 175 LL------PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L+ + ++ M L + + DNLLD +H + H S+F
Sbjct: 120 LIFAVDHWGDPAWGVNRGESMALDCNYLYMTDNLLDPSHVSWVHQSSFG 168
>gi|415942530|ref|ZP_11555927.1| Putative ferridoxin oxidoreductase subunit [Herbaspirillum
frisingense GSF30]
gi|407758833|gb|EKF68603.1| Putative ferridoxin oxidoreductase subunit [Herbaspirillum
frisingense GSF30]
Length = 388
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 151/365 (41%), Gaps = 41/365 (11%)
Query: 26 STSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPW 85
S ++ S DI++G S ++ P+ + N W+ AFS ++ ++ +
Sbjct: 4 SMTQPSHDIIRGAQVAMS-RLADRNTPF---IFNEWYVAAFSDEVGR-FLLKRTLLGKRV 58
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 143
+++R + G P + + C HR+ PL G ++ + C YHG Y G C + P+ +
Sbjct: 59 ILYRTEAGNPVVMDDRCVHRSYPLSAGQLDGDTVVCGYHGLRYDASGDCIEAPAVAKCPK 118
Query: 144 NVKIKSLPCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL 198
N+ +++ P E+ +IWIW G DE +P ++ A+ +L + L
Sbjct: 119 NIGVRTYPLAERGPVIWIWMGDPALADESKVPALPWMMDSEW--AGAKGYYDLKSSYVYL 176
Query: 199 LDNLLDLAHAPFTHTSTFAK------------GWSVPSLVKFLTPA---------SGLQG 237
+NLLD +H + H +T G +LV+ ++P +GL G
Sbjct: 177 HENLLDTSHLSYMHANTIGSPDYVKAPTKSEMGEGRFALVRTVSPTKLPPVWGKPTGLDG 236
Query: 238 YWDPYPI-DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 296
I EF P + T + EG+ + H+ P++ T
Sbjct: 237 VPTASRIVRNEFLTPALYEVTTRLYDSALAEGERPEFL---IKVAHMATPATHNTTHYFI 293
Query: 297 RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGV 356
+ DFA + Q++ +F + + + L L ++ G +++ + + D LGV
Sbjct: 294 YLGRDFAQTDEAA--TQFMATNFFKAFDEDVVGLSLLEEVIAEQGDDLYEISIASDALGV 351
Query: 357 RYRLW 361
R +
Sbjct: 352 AMRRY 356
>gi|384221115|ref|YP_005612281.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
gi|354960014|dbj|BAL12693.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 44/287 (15%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN- 144
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 145 -VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 192
+++ P E+ +W+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYVWLWMGD--PALADPALVPDMHWNHDPAWAGDGKTIHVN------ 145
Query: 193 IEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVKFLTPASGLQG-----YW-- 239
++ L+LDNL+DL H F H S+ + V K +T ++G +W
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 240 ---DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 292
P +D + F PC + +G++ G + R + L+ P + K
Sbjct: 206 QLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPETEKTC 265
Query: 293 RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 339
+ ++ + + R + +ED ++ QQ M+
Sbjct: 266 HYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 309
>gi|427418552|ref|ZP_18908735.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425761265|gb|EKV02118.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 346
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ ++FW+ VA ST LK T++ +E VIFRG++G P +++ C HR L G V+
Sbjct: 10 QFEDFWYVVALSTQLKPKTVLQRTVLDEWLVIFRGENGQPVALRDRCLHRNTRLSGGKVH 69
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWI--WPGDEPP 168
+G++QCPYHGW+Y++ G+ +P+ N K+ EQ+G +++ G E
Sbjct: 70 KGQLQCPYHGWQYASTGQVTNVPAEGEQFATTSNRCAKAYDTCEQDGYVYVRLRGGLETQ 129
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
+P P G+E ++ +N +D+ H H F
Sbjct: 130 PFAMPHFQAP-GWET-VRVINRFANNVTNCAENFIDIPHTVSVHPGIF 175
>gi|429333553|ref|ZP_19214247.1| vanillate monooxygenase [Pseudomonas putida CSV86]
gi|428761753|gb|EKX83973.1| vanillate monooxygenase [Pseudomonas putida CSV86]
Length = 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ F+ +LKD V +P V+FR DG P +++ C HRA PL G++ E
Sbjct: 25 NQWYVAGFAWELKDKP-VGRTLLGKPVVLFRTADGQPAALEDRCCHRALPLSHGTLEEQG 83
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF---EQEGMIWIWPGD--------EP 167
++C YHG ++ G+C ++P K K +P + E++ ++WIW G EP
Sbjct: 84 VRCGYHGLLFNGAGQCLEVPGQAKVPTKAK-VPAYHVRERDQILWIWFGSADHKEPTYEP 142
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
PT I SG ++ V + L+ DNLLDL+H + H T
Sbjct: 143 PTYDIHS----SGEYLYEGDVYHYDAPYQLIHDNLLDLSHLGYVHLRTIG 188
>gi|383780897|ref|YP_005465463.1| hypothetical protein AMIS_57270 [Actinoplanes missouriensis 431]
gi|381374129|dbj|BAL90947.1| hypothetical protein AMIS_57270 [Actinoplanes missouriensis 431]
Length = 399
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGS 113
LKNFW+ V FS + T P + V++R + G + + C HR L G
Sbjct: 2 LKNFWYAVEFSAHV---TTKPERITVLGQHLVVYRTPRQGRVVALSDLCVHRGAALSGGW 58
Query: 114 VNEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPP 168
+ + +I CPYHGWEY DG C K+P+ + ++ S P E+ G +W++ GD P
Sbjct: 59 LKDDKIVCPYHGWEYEPDGACTKIPANLPGRGIPKKARVDSYPVQEKYGFVWVFMGDLPE 118
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFA 217
+ P + P F+ E + + G +L+N D+AHAPF H F
Sbjct: 119 SERPPIPVWPE-FDDLVENGGKFRVVTGEFLWNANYERILENGCDIAHAPFVHAGRFG 175
>gi|351731557|ref|ZP_08949248.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax radicis N35]
Length = 351
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 125/334 (37%), Gaps = 39/334 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +R + + C HR PL LGSV +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRTICGEK-MVFYRPAPDQVAALDDFCPHRGAPLSLGSVCDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP---PTATIP 173
+QC YHG GK MP +++ K +S P E+ G IW+WPGD PT
Sbjct: 63 HLQCGYHGLRVECTGKSVSMPGQRVQGFPKTRSFPAVERYGFIWVWPGDAAQADPTKIHH 122
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
+ + + + ++ L++DNL+DL H + H
Sbjct: 123 LHWADNPEWAYGGGLYHIACDYRLMVDNLMDLTHETYVHSTSIGQKEIDEVPCKTRVEGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F +G P K +GL D +D F PP VL +G++ G
Sbjct: 183 EVITSRFMEGIEAPPFWKMALRMNGLP---DDQLVDRWQICHFTPPSHVLIEVGVALAGH 239
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ P + + M+ +F P + R ++
Sbjct: 240 GGYDAPADKKASSIVVDFITPETETSIHYFWGMARNFKP---QDPSLTTQIREGQGKIFA 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
ED ++ QQ+ + L + D GV+ R
Sbjct: 297 EDQEMLEMQQQNLLRYPERKLLMLNIDAGGVQSR 330
>gi|307150004|ref|YP_003885388.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306980232|gb|ADN12113.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 152/354 (42%), Gaps = 44/354 (12%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L+NFW+ + +LK +V EP +I R DG +++ C HR PL G
Sbjct: 2 TTLLRNFWYVALAAKNLKAGQLVGKKMLGEPVLIGRKADGEVFAMRDICPHRGIPLRHGW 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 166
+ + C YHGW++ T DG+C ++PS R +++++ P E +G IW++ E
Sbjct: 62 LEGDDVCCCYHGWKFDTKDGRCSEIPSLTEYDKLDFRRIQVQTYPAREIQGHIWVYIPSE 121
Query: 167 ----------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
PP T+P + +I ++ ++ L+D AH P+ H++ +
Sbjct: 122 AKRNLDESELPPVPTVPD-FGKTAPQIAETSHFACDVDQAVI--GLMDPAHGPYVHSAWW 178
Query: 217 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-QCA 275
+ VK + ++P P+ P M +S +KP KL G +
Sbjct: 179 WRSGPRKFRVK--------EKLYEPVPMGFRLAPYEMPVS----AKPYKLLGNKVSIEIV 226
Query: 276 THLHQL-HVCLPSSRKKTRLLYRMS-LD------FASVLKHVPFM---QYLWRHFAEQVL 324
L L L R K LL ++ +D S+ +P++ + + R+ + L
Sbjct: 227 FQLPTLRQEILRGDRHKACLLTAITPIDENQCEVHQSIYWTIPWLGIFKPIMRYLTVEFL 286
Query: 325 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
N+D +V+ QQE ++ ++ + + + L R+ + PF P+
Sbjct: 287 NQDRDVVIKQQEGLSYHPSLMLIDDADTQAKWYFSLKREYERSQQENRPFNNPV 340
>gi|239503460|ref|ZP_04662770.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB900]
gi|421679138|ref|ZP_16119017.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC111]
gi|410391630|gb|EKP43997.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC111]
Length = 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVEY 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVLMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|260549936|ref|ZP_05824151.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|424056286|ref|ZP_17793807.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425741333|ref|ZP_18859483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
gi|260406928|gb|EEX00406.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|407441326|gb|EKF47832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425492639|gb|EKU58893.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
Length = 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ +++D + C E+ V +R K+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRAKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 173
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 174 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|221202552|ref|ZP_03575581.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2M]
gi|221207751|ref|ZP_03580758.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2]
gi|221172248|gb|EEE04688.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2]
gi|221177589|gb|EEE10007.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2M]
Length = 370
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 23 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 82
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 141
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 142 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 196
+ +++ PC E G+I+++PGD P L S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRAYKTRRFGREVKCHYS 174
Query: 197 LLLDNLLDLAHAPFTHTSTFAK 218
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|123968405|ref|YP_001009263.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. AS9601]
gi|123198515|gb|ABM70156.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. AS9601]
Length = 440
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 127/309 (41%), Gaps = 30/309 (9%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ + S +LK++ + F F+EP V++R ++ C++N C HR GS+++G I
Sbjct: 48 WYAICPSKELKNNKLYYFSLFDEPLVLYRDENENVRCIKNICPHRGASFFEGSLSDGVIT 107
Query: 121 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 168
CPYHG ++S+ G C+ + + + + E+ G I++ +
Sbjct: 108 CPYHGAKFSSGGSCQNLDRITCKHIVDNNYDNYAKRIHLSQYKALEKNGYIFVHFSKKSD 167
Query: 169 T--ATIPCLLPPSGFEIH-----------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST 215
T + I +P S +E++ E++++ + +++N LD+ H + H T
Sbjct: 168 TDLSNISEDVPISNYELYENGFLHKDYVFEEVLVDFKCDWSRIIENHLDILHLFWVHGDT 227
Query: 216 F-AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
K + LV F + Y + I P I PG++
Sbjct: 228 IPDKDVNKNVLVSFNQKINVTHKYIE--SIYYYKNEPTKEFIRIKYIPPGRILIYKGDPS 285
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDF--ASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
A Q+ +P K R++ R F +L ++ + R ++ +ED ++
Sbjct: 286 AARYLQVLDHIPLGNNKARVIVRHYRKFLRNKLLNNLMLFKENQRKIFYKIFDEDYMILK 345
Query: 333 GQQERMNNG 341
Q N G
Sbjct: 346 TQTYNHNMG 354
>gi|325927780|ref|ZP_08189007.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
perforans 91-118]
gi|325541855|gb|EGD13370.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
perforans 91-118]
Length = 350
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLARHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPARMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPTFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVETQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|298709173|emb|CBJ31116.1| Pheophorbide a oxygenase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 532
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 45 NVSGPVQPYNTRLKNF-----WFPVAFSTDL--KDDTM-VPFDCFEEPWVIFRG-KDGIP 95
+ SG P ++ F W+PVA DL +D M P E V+++ KDG
Sbjct: 25 DESGSAAPDTSKQAGFQWRRQWYPVAVMRDLEARDPRMPYPVQLMGEGLVVWKDPKDGGW 84
Query: 96 GCVQNTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPST------QLRNVK- 146
+ C HR PL G V++ GR+QC YHGWE+ DGKC +P +N K
Sbjct: 85 KAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEGDGKCGSIPQATPGSRETAQNSKR 144
Query: 147 --IKSLPCFEQEGMIWIWPGDEP---------PTATIPCLLPPSGFEIHAEIVMELPIEH 195
++P EG +W+WP P P AT+P L SG +L
Sbjct: 145 ACATAIPTKVVEGKLWLWPDPSPEGVKESETVPPATVPGLDFGSGDFGGNWYCRKLAYGF 204
Query: 196 GLLLDNLLDLAHAPFTH 212
L++NL D AH PF H
Sbjct: 205 DTLIENLADPAHVPFAH 221
>gi|170078842|ref|YP_001735480.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7002]
gi|169886511|gb|ACB00225.1| Rieske [2Fe-2S] domain protein; synechoxanthin biosynthesis
[Synechococcus sp. PCC 7002]
Length = 367
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S +L D + F + E +V++R + G +++ C HR L G V
Sbjct: 29 KNHWYVAARSAELTDQPL-GFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLSSGQVVGD 87
Query: 118 RIQCPYHGWEYSTDGKCEKMP---STQLR-NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHGW++ G C +P Q R KI++LP EQ+G IW++PGD P T
Sbjct: 88 NLECAYHGWQFDASGTCAHVPYLAENQKRPACKIRTLPVREQDGFIWVFPGD-PERLTDE 146
Query: 174 CL--LPPSGFEIHAEIVMELPIE----HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 227
+ LP +E IV I+ L++NL+D+ H H + W+ L
Sbjct: 147 AIQPLPIPEWEHLNYIVSVTTIDCEGHFSYLIENLMDMYHG---HLHDNYQAWASAKLED 203
Query: 228 FLTPASGLQGYWDP---YPID 245
+ +++ Y ID
Sbjct: 204 IQVTEQRVDAHYEAQSYYKID 224
>gi|423128479|ref|ZP_17116158.1| hypothetical protein HMPREF9694_05170 [Klebsiella oxytoca 10-5250]
gi|376392961|gb|EHT05622.1| hypothetical protein HMPREF9694_05170 [Klebsiella oxytoca 10-5250]
Length = 345
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 128/308 (41%), Gaps = 42/308 (13%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARACDIGP-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHD 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTAT 171
E I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCMAFDPENPM 138
Query: 172 IPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 226
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 139 PLPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQVVPNYT 198
Query: 227 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 271
TP + YW YP EFR P +T+ I PG+
Sbjct: 199 PQETPFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------ 252
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMV 303
Query: 332 LGQQ-ERM 338
Q+ ER+
Sbjct: 304 ETQRPERL 311
>gi|239820953|ref|YP_002948138.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805806|gb|ACS22872.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 341
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 140/341 (41%), Gaps = 40/341 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ +A+ ++ DD + +EP +++R + G +Q+ C HR PL G
Sbjct: 3 VRNCWYVIAWDHEISDDALFTRTVLDEPILVYRTEGGELVAMQDRCCHRHAPLSRGRREG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG +++ DG C + P VK +++ P I++W GD P+
Sbjct: 63 DCVRCGYHGLKFAADGVCVEAPGLASIPVKARVRTYPVVSHNKWIFVWMGD--PSLADRA 120
Query: 175 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTF----AKGWSVPSL 225
LLP + H + + + L+ DNLLD +H + H T A +VP +
Sbjct: 121 LLPDNFSCDHPDWRYRPGYVHYDTPYLLVCDNLLDFSHLSYVHEGTLGGSTAIAQAVPRI 180
Query: 226 VK------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 267
K F + D Y I +F P +L G + G+ E
Sbjct: 181 EKVPRGIRVTRHVPDVPPSPFWKSFQSFESNVDRYFI-YDFLLPGTLLMKSGGAPVGQAE 239
Query: 268 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 327
+ ++ LH P + T ++ S S + + ++R ED
Sbjct: 240 --DEQRGGVQLHSCQALTPETATTTHYFFQQS--HRSSIADPAVTETIYRGLV-TAFEED 294
Query: 328 LRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEK 367
++ Q ++ A + LP+ D V+Y RL ++ +E+
Sbjct: 295 REMITAQYLNIDPEARM--LPLAMDAALVQYRRLLQEEVER 333
>gi|113477070|ref|YP_723131.1| Rieske (2Fe-2S) protein [Trichodesmium erythraeum IMS101]
gi|110168118|gb|ABG52658.1| Rieske (2Fe-2S) region [Trichodesmium erythraeum IMS101]
Length = 349
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ VA S +L+ + + + V++RG G +++ C HR L G V
Sbjct: 19 QNHWYAVARSIELQSQPL-SITLWHQTIVLYRGCSGKVYGLEDICPHRFVKLSSGRVIAD 77
Query: 118 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHGW + ++GKC +P + +L + +I++ P E G IW++PGD+ I
Sbjct: 78 ELECTYHGWRFESNGKCSHIPYLASNQKLPSCQIRTFPVQELHGFIWLFPGDKSLANLIS 137
Query: 174 CLLPPSGFEIH--AEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 230
L P ++ A I V++ + L++NL+D+ H H + W+ L+
Sbjct: 138 PLEIPEWDHLNYIATISVIKCRAHYSYLVENLMDMYHG---HLHQNWQAWAAAKLIDLSE 194
Query: 231 PASGLQGYWDP---YPID 245
+ Y++ Y ID
Sbjct: 195 NDHRVDAYYEAQSYYKID 212
>gi|386397519|ref|ZP_10082297.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
gi|385738145|gb|EIG58341.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
Length = 349
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 46/288 (15%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN- 144
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 145 -VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 192
+++ P E+ IW+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYIWLWMGD--PALADPALVPDLHWNHDPAWAGDGKTIHVN------ 145
Query: 193 IEHGLLLDNLLDLAHAPFTHTSTFAK------------GWSVPSLVK---------FLTP 231
++ L+LDNL+DL H F H S+ G ++ + F
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 232 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 291
G G D + I + F PC + +G++ G + R + L+ P + K
Sbjct: 206 QLGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPETEKT 264
Query: 292 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 339
+ ++ + + R + +ED ++ QQ M+
Sbjct: 265 CHYFWAFVRNYQLGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 309
>gi|398849602|ref|ZP_10606336.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250670|gb|EJN35978.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 357
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ A S +LKD + +P V+FR D +++ C HRA PL G+V E ++
Sbjct: 25 WYVAALSRELKDQPL-GRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSGGTVEERGLR 83
Query: 121 CPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLP 177
C YHG ++ GKC ++P K+ + P EQ+ +IWIW G E P P P
Sbjct: 84 CGYHGLLFNEGGKCIEIPGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPE---PTFAP 140
Query: 178 PSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
P +++H+ V + L+ DNL+DL+H + H T S+
Sbjct: 141 PV-YDVHSSGKYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLHTIGGNASI 191
>gi|365887916|ref|ZP_09426728.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3809]
gi|365336458|emb|CCD99259.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3809]
Length = 452
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L + V +V+F+ G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGGDFVLFKDAQGRYGLLDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 161
L G + +G ++C +HGW + DG C + P+ + +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEQGGLRCSFHGWLFDVDGACLETPAEPVGSPLCKNVKQRSYPVVEKGGILWA 133
Query: 162 WPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
W GD P A + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGDGAPPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|383452297|ref|YP_005366286.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380732272|gb|AFE08274.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 382
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK+FW+ ST+L + V F V+FRG DG P +++ C HR L G V +
Sbjct: 20 LKDFWYVACLSTELPANKPVARTVFGTGLVLFRGPDGAPTALRDRCLHRNARLSQGDVFD 79
Query: 117 GRIQCPYHGWEYSTDG------------KCEKMPSTQLRNVKIKSLPC----------FE 154
GR+ CPYHGW Y G + EK+ + + +K PC E
Sbjct: 80 GRLGCPYHGWVYDVSGAVVEIPALGPPQRGEKLDAHACTHEGLKPAPCDVGRLARFPTRE 139
Query: 155 QEGMIWIWPGDEPPTATI-PCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFT 211
Q+G+++++ G + A P +P G M +G+ L++N +D+ H F
Sbjct: 140 QDGLVYVYLGKDVTQARAEPFRVPYWGERGWTVYFMVTRFANGVTNLVENFMDVPHTSFV 199
Query: 212 HTSTFAKGW-------SVPSLVK 227
H +GW VPS VK
Sbjct: 200 H-----RGWFRNPTRKRVPSTVK 217
>gi|148556311|ref|YP_001263893.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501501|gb|ABQ69755.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A+S ++ + + F++P + +R + G + N C HR PL+ G +
Sbjct: 4 LLNRWYAAAWSGEVAREPFMRV-LFDKPVLFYRTESGDVTALSNVCPHRFAPLNRGKLFG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I+CPYHG + DG+C + P + ++ E G+IWIW G P AT
Sbjct: 63 DAIRCPYHGLRFGPDGRCVQNPIGKGLLPAKAQLTRYATIEAHGVIWIWHGPAPADAT-- 120
Query: 174 CLLPPSGFEIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 212
L+P + H + + + + L+ DNLLDL+HA F H
Sbjct: 121 KLVPFDFLDEHDRYDFVDGYIAIDANYALVSDNLLDLSHAEFLH 164
>gi|416952092|ref|ZP_11935501.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523128|gb|EGD01529.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 349
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ + D+ + P E V++R DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAGWDKDVTR-ALTPVTMLGERIVLYRKADGTPVALEDACPHRMLPLSMGRLTG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP---PTA- 170
++C YHG + G C + P + ++ P E+ G++W+W GDE P A
Sbjct: 62 DDVECGYHGLTFDCSGACVRAPGSARIPAQAVVRRYPVAERYGLVWVWMGDEAAADPDAL 121
Query: 171 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
TI P+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 122 LTIDEWDDPA-WGLNRGDAMTVDCHYLYMTDNLLDPSHVAWVHRSSFGNAACESEPLKTS 180
Query: 230 TPASGL 235
A+G+
Sbjct: 181 AAANGV 186
>gi|289671663|ref|ZP_06492553.1| Rieske [2Fe-2S] region, partial [Pseudomonas syringae pv. syringae
FF5]
Length = 190
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|213385123|dbj|BAG84251.1| putative oxygenase [Streptomyces griseoviridis]
Length = 442
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ N W+PVA S D+K + E V++R G + C H+ L G +N+
Sbjct: 2 IPNQWYPVARSRDVKQNKPKGAMRLGEEVVMWRDARGNAVVQEARCPHKGANLGAGRINQ 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMP--STQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
++CPYHG+ + G CE +P ++ R ++I++ P E+ M+W+W G+E +
Sbjct: 62 NALECPYHGFRFGAGGDCEAVPCLGSEARIPKGLRIRNYPVREEHDMVWMWWGEE--RES 119
Query: 172 IPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P + +PP +H + P+ + ++++L+ HAPF H ++
Sbjct: 120 YPEIDIPPEVTRWKGVHVTGSWQQPVHYTRYIESMLEFYHAPFVHRGSW 168
>gi|221215699|ref|ZP_03588660.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD1]
gi|221164401|gb|EED96886.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD1]
Length = 370
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 23 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 82
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 141
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 142 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEH 195
+ +++ PC E G+I+++PGD P + S G++ E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPVLASADDRGYKTR-RFGREVKCHY 173
Query: 196 GLLLDNLLDLAHAPFTHTSTFAK 218
+ +NL+D+ H F H +
Sbjct: 174 SFMHENLMDMNHQ-FLHRKQMGQ 195
>gi|421480173|ref|ZP_15927817.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|400221579|gb|EJO52022.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 370
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 23 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 82
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPAGGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 141
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 142 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 196
+ +++ PC E G+I+++PGD P L S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRAYKTRRFGREVKCHYS 174
Query: 197 LLLDNLLDLAHAPFTHTSTFAK 218
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|86749388|ref|YP_485884.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86572416|gb|ABD06973.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 452
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W PVA +L+ + + P E +V+F+ + G G + C HR
Sbjct: 14 GPATPCGKLMRAYWQPVALVDELEGERPIKPVRLLGEDFVLFKDETGRYGLMDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DGKC + P S +N+K ++ P + GM+W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCLETPAEPGNSVLCQNIKQRAFPVVAKGGMLWT 133
Query: 162 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ G EPP I C + P + + E L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFVAPDSHVFAFKGLFECNWLQALEVG--IDPAHASFLH 184
>gi|41407532|ref|NP_960368.1| hypothetical protein MAP1434 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395885|gb|AAS03751.1| hypothetical protein MAP_1434 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 372
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 50 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
Q TR W + D D P D F + V+FRG DG + C H L
Sbjct: 14 AQAVPTRFARGWHCLGLIRDFGDGKPHPIDAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 73
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 166
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 74 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 133
Query: 167 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 134 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 186
>gi|440777042|ref|ZP_20955861.1| hypothetical protein D522_09467 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436722755|gb|ELP46670.1| hypothetical protein D522_09467 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 370
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 50 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
Q TR W + D D P D F + V+FRG DG + C H L
Sbjct: 12 AQAVPTRFARGWHCLGLIRDFGDGKPHPIDAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 71
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 166
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 72 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 131
Query: 167 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 132 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 184
>gi|148556315|ref|YP_001263897.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501505|gb|ABQ69759.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 345
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ ++ +L + + E + +R + V + C HR PLH+G +
Sbjct: 4 LRNCWYVAGWADELAEGAPLARTIAGEAILFWRDGASL-FAVADRCPHRLAPLHMGRTDG 62
Query: 117 GRIQCPYHGWEY-STDGKCEKMPSTQLRN-VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG + G+C P + + + I++ PC E+ ++W+W GD P P
Sbjct: 63 ATVRCGYHGLAFDGVSGRCTDNPHGAITSALAIRTYPCVERHRILWVWTGD--PDRADPA 120
Query: 175 LLPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+P GF A + M H LL DN+LDL+HA + H +T G
Sbjct: 121 DIPDMGFVDRAGEHAFSKGYMHTAAGHKLLEDNILDLSHADYLHPATLGGG 171
>gi|442318730|ref|YP_007358751.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441486372|gb|AGC43067.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 337
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 147/370 (39%), Gaps = 70/370 (18%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 103
+ P++ Y +W PVAFS ++++ V F V++R G+ Q CA
Sbjct: 1 MRTQDPLRSYQEVFSAYWHPVAFSHEVQERP-VAFRLLGTEGVVWRSDTGV-AATQRYCA 58
Query: 104 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMI 159
HR L G ++C +HGW Y DG+C ++PS + ++ + C E+ G+I
Sbjct: 59 HRGADLCQGERVTQGLRCAFHGWTYGRDGQCLRIPSQPSAPIPASARLDTYRCHERYGLI 118
Query: 160 WIWPGDEPPTATIPCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
W+ D P A +P + A + ++ + G +++ +LD+AH + H TF
Sbjct: 119 WVCLADT-PAAPLPEWPELEDGTVAAVALPRLDWEVSAGRMMEIILDVAHLSWVHRGTFG 177
Query: 218 K--------------GWSVPSLVKFLTPASGLQGY----------WD---PYPIDMEFRP 250
V S + + A G++G +D P+ + + F+P
Sbjct: 178 NPEQPEVPPYEVERHSGGVRSRIVYPALAPGMEGAPGRVDRTTLTYDVTLPFAVRLAFKP 237
Query: 251 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP 310
T+ V P S +K + Y FAS H P
Sbjct: 238 TLFYAHTV----------------------YAVASPLSEEKMQCFY-----FAS---HHP 267
Query: 311 FMQYLWRHFAEQ---VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEK 367
++ F + +L +D R+ GQ+ R + + V D L + YR AL
Sbjct: 268 KIRNFGEMFVKSELAILEQDRRVAEGQRPRAHPVDFAHEVHVKADSLPIEYRRAVAALRL 327
Query: 368 G-AKQLPFMK 376
G A +LP ++
Sbjct: 328 GDAPRLPGLE 337
>gi|428300003|ref|YP_007138309.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 6303]
gi|428236547|gb|AFZ02337.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 6303]
Length = 340
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ FW+PV L + F + V++ G P V++ C HR+ L LG V
Sbjct: 9 FRRFWYPVVPINLLSKSSPHAFTLLNQKIVLWLDSQGNPAAVKDRCCHRSAQLSLGKVVN 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
G I CPYHGW +++ G C +P N ++ S C E+ G W+ D P I
Sbjct: 69 GDIVCPYHGWNFNSTGTCTHVPQLNNGMIPSNYQVTSYACVERYGYAWVCLED--PLCDI 126
Query: 173 PCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P + FE IH E +++N D AH F HT+TF
Sbjct: 127 PNIPEARNFEYRLIH-EFYEPWNCAGLRVMENEFDTAHPTFVHTTTFGN 174
>gi|27376049|ref|NP_767578.1| dioxygenase [Bradyrhizobium japonicum USDA 110]
gi|27349188|dbj|BAC46203.1| blr0938 [Bradyrhizobium japonicum USDA 110]
Length = 445
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 112/275 (40%), Gaps = 44/275 (16%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQ 99
K L SGP L+ FW PV S +L + P E + FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSKELPEADGEPKKIVVLGEELLAFRDSRGVVGVID 67
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 154
C HR L LG E I+C YHGW++ TDG+C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLIRIKSYPVRE 127
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 202
MIW + G +P L E+ M LP H + L+
Sbjct: 128 WGEMIWAYMGPADVMPELPDL----------EMAM-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 203 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 255
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHDAGL 235
Query: 256 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 288
S G G+L G + + A L H PS+
Sbjct: 236 SIAG----GRLTGSDNIYWRIAQFLMPFHAYAPSA 266
>gi|162147961|ref|YP_001602422.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542578|ref|YP_002274807.1| Rieske (2Fe-2S) domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786538|emb|CAP56120.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530255|gb|ACI50192.1| Rieske (2Fe-2S) domain protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 360
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA+S +LK + +P + R +G +++ CAHR PL G V
Sbjct: 29 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPAEGEVFALEDRCAHRQVPLSKGVVKGQA 88
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ PC EQ+G+I+++PGD A P
Sbjct: 89 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREQDGLIFVFPGDPERAAATP-- 145
Query: 176 LPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
LP + + + + + +NL+D+ H F H +
Sbjct: 146 LPRLAQTTNPDYKTRRFGRHVKCHYSFMHENLMDMNHQ-FMHMKQMGQ 192
>gi|91786893|ref|YP_547845.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91696118|gb|ABE42947.1| Rieske (2Fe-2S) region [Polaromonas sp. JS666]
Length = 350
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 66 FSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 125
+ ++K M E V +R +DG +Q+ C HR PLHLG + I+C YHG
Sbjct: 4 WGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHG 63
Query: 126 WEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT-ATIP---CLLPP 178
+ GKC K P + +++S P E+ GM+WIW G + TIP L
Sbjct: 64 LTFDCSGKCVKNPHGDGKVPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVLESE 123
Query: 179 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+GF + + + + L+ +NLLDL+H + H
Sbjct: 124 AGFAT-SRGYLHIEANYELMGENLLDLSHITYLH 156
>gi|428297609|ref|YP_007135915.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234153|gb|AFY99942.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 444
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 140/346 (40%), Gaps = 45/346 (13%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 117
W+P++ DL+ D +P VI++ V + C HR PL G +++ G
Sbjct: 11 WYPLSPVEDLEKDRPIPVKVLGINLVIWKPLSSETFQVFLDECPHRLAPLSEGRIDDQTG 70
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIW----PGD 165
+ C YHGW++ + G C +P + N + S P E++ ++W+W D
Sbjct: 71 NLMCSYHGWQFDSQGSCTHIPQAEKAEIIAKNQDNFCVTSFPVREEQDLLWVWLDLNSVD 130
Query: 166 EPPTATIPC--LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 222
T +P L+ S + + V +L + L++N+ D +H PF H + +
Sbjct: 131 IAATTKLPLSPLVDASKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRDKAK 190
Query: 223 PSLVKFLTPASGLQGYWD----PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 278
P L++ + + P + F PPC + I K G T
Sbjct: 191 PILMQVKDSQADIIEVETVGNFSVPTKITFEPPCRLEYAIQFGGEDKQMGLVT------- 243
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV------- 331
C+P S K+RL+ + +FA + W H + L D ++
Sbjct: 244 ----YCIPISPGKSRLVAQFPRNFAK--RAHKLTPRWWDHINNRNLVIDGDMILLRQQEQ 297
Query: 332 -LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 376
L Q +R + + LP G D+L + YR W D G +LP+ K
Sbjct: 298 LLQQHQRTESWKTAYKLPTGADRLVIEYRNWFDRYCGG--KLPWEK 341
>gi|411118586|ref|ZP_11390967.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410712310|gb|EKQ69816.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 340
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LK FW+P+ + L + PF+ I+ DG P V + C HR+ L G +
Sbjct: 9 LKRFWYPIVPLSALSFEIPYPFELLGHKLAIWLDADGQPAAVSDRCCHRSAQLSKGVIIN 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEP--PT 169
G ++CPYHGW Y+ G C +P T + K+ S C ++ G +W+ ++P P
Sbjct: 69 GCLRCPYHGWSYNRAGACVNVPQFEPDQTIPSSYKVSSYLCSKRYGYVWVCLAEDPLLPI 128
Query: 170 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
TIP P+ IH + +++N D +H F H ++F
Sbjct: 129 PTIPEANDPAMRLIH-QFYERWNCSGLRVMENSFDNSHFSFVHAASFG 175
>gi|114050057|emb|CAK51082.1| putative vanillate O-demethylase oxygenase subunit A [Streptomyces
ambofaciens]
Length = 362
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 59/324 (18%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ ++ + P ++R +G + + C HR PL G +
Sbjct: 27 NAWYVAAWDHEVTGKQPLARTVAGIPLALWRTTEGRAIALADACWHRLAPLSKGRILGDE 86
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+QCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD P P +
Sbjct: 87 LQCPYHGLRYNATGRCTGMPAQETINPSAVVPSYPVVERYRYVWVWVGD--PDLADPATV 144
Query: 177 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 218
P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 145 PDMHQMDDPTWAGDGETIHAD------CNYQLILDNLMDLTHEEFVHSSSIGQEELSEAE 198
Query: 219 ------GWSVPSLVKFL----TPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 259
G +V ++ +++ P L+ D +P +D + F P + +G
Sbjct: 199 FDVTHEGNTV-TVTRWMRDIDAPPFWLKNMRDKFPGFSGKVDRWQIITFEAPGTIRIDVG 257
Query: 260 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYL 315
++K G + R + + ++ P + + + + LD ++ +
Sbjct: 258 VAKAGTGAPEGDRTQGVNGYVMNTITPETDRTSHYFWAFMRNYRLDSQTITTQL------ 311
Query: 316 WRHFAEQVLNEDLRLVLGQQERMN 339
R V ED ++ QQ ++
Sbjct: 312 -RQAVHGVFGEDEEMLCAQQRAID 334
>gi|86611381|gb|ABD14374.1| vanillate monooxygenase oxygenase subunit [Rhodococcus sp. DK17]
Length = 356
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 QQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|389871176|ref|YP_006378595.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
gi|388536425|gb|AFK61613.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
Length = 363
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ +S D+ + + P E V +R +DG +++ C HR PL +G + +
Sbjct: 3 LKNAWYVAEWSHDIVHE-LYPLQLLNEYLVFYRQQDGQVVALEDACPHRKLPLSMGRLID 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 173
++C YHG ++ G C P ++ R +KS E+ G++W+W G D+ + IP
Sbjct: 62 DAVECGYHGLTFNGQGTCIFAPGAKIPRAATVKSFATTEKYGLVWVWMGDADKADASLIP 121
Query: 174 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
+ + I+ M + + + DNLLD +H + H S+F V +
Sbjct: 122 QIAEYGHPDWGINQGDAMIVECNYLYMTDNLLDPSHVAWVHRSSFGNSACVNEPLTTTVT 181
Query: 232 ASGL 235
SG+
Sbjct: 182 DSGV 185
>gi|158340878|ref|YP_001522046.1| hypothetical protein AM1_D0239 [Acaryochloris marina MBIC11017]
gi|158311119|gb|ABW32732.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 234
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRA 106
G P ++ W P+A+ DL + F E+ VI+ + V + C HR
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPSQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 107 CPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPST-------QLRNVKIKSLPCFEQEGM 158
PL G + +G ++CPYHGW +S G+C ++P Q R ++SLP ++GM
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 159 IWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTH 212
++++PG A IP L+ P + IV+ +LP + LL+N+LD +H PF H
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEEAPNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFAH 210
>gi|330808947|ref|YP_004353409.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377055|gb|AEA68405.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 347
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ A+ T++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGTEVKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 171
++CPYHG E+ G C P + K+K+ P E+ ++WIW GD
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKVKAYPLVERYSLLWIWMGDAQLADATL 123
Query: 172 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
IP C+ + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFSCMDEDHWYV--GKRYLHARANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|397734225|ref|ZP_10500935.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396929893|gb|EJI97092.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 356
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 QQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|350567199|ref|ZP_08935784.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
gi|348659611|gb|EGY76364.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
Length = 276
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 115
+KN W+ V S+++ + +V V +R G C+ + C+HR L G V N
Sbjct: 2 IKNQWYAVLSSSEVNKNQLVGVRRLGMDLVFYRDNKGEVSCLMDMCSHRGAALSKGEVVN 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRN------VKIKSLPCFEQEGMIWIWPGDEPPT 169
IQCP+HG E++ +G+C+ +P+ + N + E+ +I+IW GD+ +
Sbjct: 62 NCNIQCPFHGLEFNGEGECQFIPANGINNQGDLTRYNVSFFKLIEKHDIIYIWYGDKDKS 121
Query: 170 A-TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+ IP + +E + ++N LD+ H PF H +T G
Sbjct: 122 SDDIPFHDEIDKSFVFSEFKDHWNTHYSRAIENQLDVVHLPFVHHNTIGAG 172
>gi|365897365|ref|ZP_09435373.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3843]
gi|365421867|emb|CCE07915.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3843]
Length = 452
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L+ + V P E V+FR + G G + CAHR
Sbjct: 14 GPNDPCGKLMRQYWQPAALVDELQGERPVRPVRLLGENLVLFRDEQGRYGLIDRHCAHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + G+C P S N++ +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCSFHGWLFDVTGQCLDTPAEPKGSNLCANIRQRSYPVVEKSGIVWA 133
Query: 162 WPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ G+ P A I C P+ F+ H E +E G +D AHA + H
Sbjct: 134 YLGEGTPPAFPEIDCFTAPASHTFAFKGHMECNWLQALEVG------IDPAHASYLH 184
>gi|359398803|ref|ZP_09191819.1| hypothetical protein NSU_1505 [Novosphingobium pentaromativorans
US6-1]
gi|357600041|gb|EHJ61744.1| hypothetical protein NSU_1505 [Novosphingobium pentaromativorans
US6-1]
Length = 352
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ S+D +D + C + P +R DG + + C HR PL +G +
Sbjct: 3 LKNVWYVAGPSSDFGEDVVSRRIC-DRPVAFYRKSDGSIAALHDRCPHRFVPLSMGQRED 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHG + DG C+ P+ N + + E+ G WIW G+ P
Sbjct: 62 DSLRCGYHGLRFGPDGVCDDKPAGDQENPAKICTQHFAVEERYGYAWIWMGEAENAK--P 119
Query: 174 CLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH 212
++P F E +++ H L+ DNLLDL+H + H
Sbjct: 120 AMIPDFSFITSGEFKCEAGYLKVQGHHELITDNLLDLSHVNYLH 163
>gi|424859149|ref|ZP_18283163.1| vanillate monooxygenase subunit [Rhodococcus opacus PD630]
gi|356661658|gb|EHI41969.1| vanillate monooxygenase subunit [Rhodococcus opacus PD630]
Length = 357
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|124268855|ref|YP_001022859.1| oxidoreductase subunit alpha [Methylibium petroleiphilum PM1]
gi|124261630|gb|ABM96624.1| oxidoreductase alpha subunit [Methylibium petroleiphilum PM1]
Length = 407
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTC 102
L+ S +Q T ++N W+ S + +V P V++R + G C
Sbjct: 40 LHSSVEIQVKETLIRNLWYVAGTSDEFAPGQLVGQTIVGLPLVLWRPEAGGEVVAFDGRC 99
Query: 103 AHRACPLHLGSV-NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEG 157
H+ PL G + +G ++C YHG + + GKC K+PS R + K++ P EQ+G
Sbjct: 100 CHKRMPLAAGKLLADGTLECAYHGLCFDSAGKCVKIPSQPGRAIPSRAKLRPYPIVEQDG 159
Query: 158 MIWIWPGDEPPTA----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 207
M+WIW GD+ A IP L P I + E+P + LL++NLLD++H
Sbjct: 160 MVWIWMGDDANPALRPPRIPELASPEWEAIRVQNA-EVPTNYLLLIENLLDISH 212
>gi|226363504|ref|YP_002781286.1| vanillate demethylase oxygenase subunit [Rhodococcus opacus B4]
gi|226241993|dbj|BAH52341.1| putative vanillate demethylase oxygenase subunit [Rhodococcus
opacus B4]
Length = 355
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 45/344 (13%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ + C YHG+ Y +DG C +P + R +++ EQ+ +W+W D + P
Sbjct: 61 SRLDGDTVVCGYHGFTYGSDGGCVFVPGQKRVPRTARLRQYQVVEQDSFVWVWIADPDNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 315
+ IG PG T A H ++ PS+ T + ++ DFA L +L
Sbjct: 240 APIGAPLPGD---DGTDPHAFHSEIVYAITPSTENSTLDFWAVARDFA--LGDDAVTTFL 294
Query: 316 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+ V+ + + L + QQ L + D G+ R
Sbjct: 295 AENNRTVVMQDVVALNILQQALDTEQDGYQELSINIDAGGLGAR 338
>gi|209515974|ref|ZP_03264835.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
gi|209503632|gb|EEA03627.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
Length = 416
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S ++K + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 62 DHWYPLAWSHEVKRGKTLGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 121
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD A P
Sbjct: 122 IRCGYHGWTYDCAGKCVDVPYLGRERLPNGVRSYPCHEVEGLIFVFPGDAALAAERP 178
>gi|399078123|ref|ZP_10752723.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034061|gb|EJL27338.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 336
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T + N W+P + +L+ + + P +I+R G+ + + C HR P G++
Sbjct: 2 TYIYNAWYPAGWVHELEKGP-IARKFLDIPVMIYRLSTGVLAALHDRCPHRFAPFSYGTI 60
Query: 115 NEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TA 170
E +++C YHG E+ + G+C + + K++S P FEQ+ ++WIW G+E P T+
Sbjct: 61 VEDKVRCIYHGLEFDSAGRCVGNALCFAAPKVAKVRSFPVFEQDNVVWIWMGEEEPADTS 120
Query: 171 TIPCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
TIP P ++ + ++ LL DNL+DL H H
Sbjct: 121 TIPRYAYHNDPKYRCVYGNNYTKA--DYRLLCDNLMDLTHIVLLH 163
>gi|421598258|ref|ZP_16041719.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
gi|404269631|gb|EJZ33850.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
Length = 357
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+S ++ + C + V++R DG+ +++ C HR PL LG +
Sbjct: 10 NAWYAAAWSHEVARELSARTICGKNI-VLYRRVDGLITALEDACWHRLLPLSLGHLKGDD 68
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG +++ G+C MP+ + N +++ P E+ ++W+WPGD P P +
Sbjct: 69 VMCGYHGLVFNSAGRCSYMPAQKTINPSACVRAYPVAERHRLVWLWPGD--PALADPTKI 126
Query: 177 PPSGFEIHAEIVME------LPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P + + + E L ++ L++DNL+DL H + H +
Sbjct: 127 PDFHWNDGKQWIGEGGTFYQLKCDYRLVIDNLMDLTHETYVHAGSIG 173
>gi|111021144|ref|YP_704116.1| vanillate monooxygenase oxygenase subunit [Rhodococcus jostii RHA1]
gi|110820674|gb|ABG95958.1| possible vanillate monooxygenase oxygenase subunit [Rhodococcus
jostii RHA1]
Length = 356
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 QQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|218291425|ref|ZP_03495351.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218238715|gb|EED05933.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 327
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 127/331 (38%), Gaps = 49/331 (14%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 107
PV + W+ V FS L V+FR G + C HR
Sbjct: 6 APVPSEDRVFPATWYAVCFSAQLTRRRPHAARVAGRDLVLFRDASGHVRALSRYCTHRGA 65
Query: 108 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP 163
L LG V G + C YHGW++ DG+C +P+ R + ++ P E+ G+ W++
Sbjct: 66 DLALGRVEGGHLACAYHGWQFQGDGRCTLIPAHPDRPIPDFAHNRAYPACERGGIAWVYL 125
Query: 164 GDE--PPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
G E PP + L + + E V + + +++++LD+AH F H T G
Sbjct: 126 GGETSPPEPRVFSELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTI--GR 181
Query: 221 SVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
P+++ + G+ YW P + I +P + +G
Sbjct: 182 RTPAIIPRVSFDADDSDRILIRNGGGVLEYWFP---------------QMWILRPAEGKG 226
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
P + TR+L FA + VP M L+R ++ +VL ED
Sbjct: 227 G--------FINFVTFTPVDAETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQ 275
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
R+V Q R A V D VR+R
Sbjct: 276 RVVESQHPRPIPEALRMEAHVPADAPQVRFR 306
>gi|347760397|ref|YP_004867958.1| vanillate O-demethylase oxygenase [Gluconacetobacter xylinus NBRC
3288]
gi|347579367|dbj|BAK83588.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 360
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L FW+PVA D+ D + +EP V++R + I + C HR PL LGS +
Sbjct: 28 LARFWYPVALERDVGDKPLAAM-LLDEPLVVYRAGEEIV-IAHDLCPHRGVPLSLGSGDG 85
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI-------WPGD 165
I C YHG+ + G+C ++P+ + +++ P + G+IW WP D
Sbjct: 86 RSIACAYHGFRFGGAGRCVRIPAHPDNAIPSKMNLRTYPAIRRYGLIWTCLRPDGQWPQD 145
Query: 166 EPP---TATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
+A IP L+P GF+ +++ G ++ LD+AH F HT+TFA
Sbjct: 146 ADAIRDSADIP-LMPHWEDVGFQQIVCPSIDIHGFAGRQMEGFLDVAHFAFVHTATFADA 204
Query: 220 WS--VPSLVKFLT 230
+ VPS LT
Sbjct: 205 DNPVVPSYRPVLT 217
>gi|258512017|ref|YP_003185451.1| Rieske (2Fe-2S) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478743|gb|ACV59062.1| Rieske (2Fe-2S) iron-sulphur domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 327
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 127/331 (38%), Gaps = 49/331 (14%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 107
PV + W+ V FS L + V+FR G + C HR
Sbjct: 6 APVPSEDRVFPATWYAVCFSAQLTRRRPLAARVAGRDLVLFRDASGHVRALSRYCTHRGA 65
Query: 108 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP 163
L LG G + C YHGW++ DG+C +P+ R + ++ P E+ G+ W++
Sbjct: 66 DLALGRAEGGHLACAYHGWQFQGDGRCTLIPAHPDRPIPDFAHNRAYPACERGGIAWVYL 125
Query: 164 GDE--PPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
G E PP + L + + E V + + +++++LD+AH F H T G
Sbjct: 126 GGETSPPEPRVFSELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTI--GR 181
Query: 221 SVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
P+++ + G+ YW P + I +P + +G
Sbjct: 182 RTPAIIPRVSFDADDSDRILIRNGGGVLEYWFP---------------QMWILRPAEGKG 226
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
P + TR+L FA + VP M L+R ++ +VL ED
Sbjct: 227 G--------FLNFVTFTPVDAETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQ 275
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
R+V Q R A V D VR+R
Sbjct: 276 RVVESQHPRPIPEALRMEAHVPADAPQVRFR 306
>gi|302381678|ref|YP_003817501.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Brevundimonas subvibrioides ATCC 15264]
gi|302192306|gb|ADK99877.1| Rieske (2Fe-2S) iron-sulfur domain protein [Brevundimonas
subvibrioides ATCC 15264]
Length = 370
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG- 117
+ W+ VA S D+ ++ + EP ++ R +DG +++ C HRA PL G + +
Sbjct: 27 DTWYFVALSRDVAVASLKRHELLGEPVLVGRRRDGQVYAMRDICPHRAAPLSAGRLVQKP 86
Query: 118 ----RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 167
++CPYHGW + TDG C +PS + ++++S P E +GM++++ +P
Sbjct: 87 GEPEAVECPYHGWRFGTDGVCAAIPSLVDDQPYEADRIRVRSYPVAESQGMVFVYVRSDP 146
Query: 168 PTATIPCLLPPS-----GFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTH 212
+ P PP+ G E M+ I+H ++ L+D AH P+ H
Sbjct: 147 RSDAAPDHPPPTFPGVVGGEAKLVEWMDFDSHIDHAVV--GLMDPAHGPYVH 196
>gi|315497534|ref|YP_004086338.1| rieske (2fe-2S) iron-sulfur domain-containing protein
[Asticcacaulis excentricus CB 48]
gi|315415546|gb|ADU12187.1| Rieske (2Fe-2S) iron-sulfur domain protein [Asticcacaulis
excentricus CB 48]
Length = 367
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 114
L++ W+ A + DLK + ++ EP ++ R G +++ C HRA PL G +
Sbjct: 21 LRDAWYFAALAHDLKPGKLQRYEILGEPVLLARDTQGKAYAMRDICPHRAAPLSAGKMIP 80
Query: 115 ----NEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-- 162
+ +QCPYHGW + T G C +PS + ++++S EQ+G++WI+
Sbjct: 81 DPKTGQPVVQCPYHGWTFGTHGGCTAVPSLTADQPMDVERIRVRSYAVKEQQGIVWIYMT 140
Query: 163 --------PGDEPP-----TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 209
P EPP P ++ F+ H I+H ++ L+D AH P
Sbjct: 141 ADARRPAEPDHEPPMLPGVVGGKPIIVESMDFDSH--------IDHAVV--GLMDPAHGP 190
Query: 210 FTH 212
+ H
Sbjct: 191 YVH 193
>gi|384103330|ref|ZP_10004307.1| vanillate monooxygenase oxygenase subunit [Rhodococcus imtechensis
RKJ300]
gi|383839171|gb|EID78528.1| vanillate monooxygenase oxygenase subunit [Rhodococcus imtechensis
RKJ300]
Length = 357
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 112
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 113 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 168
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIVDPQNP 120
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 212
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 213 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 255
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 256 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 303
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|414175230|ref|ZP_11429634.1| hypothetical protein HMPREF9695_03280 [Afipia broomeae ATCC 49717]
gi|410889059|gb|EKS36862.1| hypothetical protein HMPREF9695_03280 [Afipia broomeae ATCC 49717]
Length = 360
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 50 VQPYNTRLK------NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV---QN 100
VQP + L+ + W+P+A+S +LK EP V+ R KDG G V ++
Sbjct: 13 VQPPDIDLRRIGSHPDHWYPLAWSKELKPGKTYAAQFAGEPIVLIRPKDG--GAVFALED 70
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEG 157
CAHR PL G V ++C YHGW Y GKC +P +L N +++ PC EQ+G
Sbjct: 71 RCAHRQVPLSKGVVEGCAVRCCYHGWTYDASGKCIDVPYLGKDKLPN-GVRAYPCREQDG 129
Query: 158 MIWIWPGDEPPTATIPCLLPPSGFEIHA----EIVMELPIEHGLLLDNLLDLAHAPFTHT 213
+I IWPGD P A I L P A ++ + + +NL+D+ H F H
Sbjct: 130 LILIWPGD--PKA-ITELGPLGSAHDKAFKTRRFGKQVRCHYTFMHENLMDMNHQ-FLHR 185
Query: 214 STFAK 218
K
Sbjct: 186 RQMGK 190
>gi|336177381|ref|YP_004582756.1| Rieske (2Fe-2S) domain-containing protein [Frankia symbiont of
Datisca glomerata]
gi|334858361|gb|AEH08835.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia symbiont of
Datisca glomerata]
Length = 365
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRI 119
W+ +S DL+ ++P + + +FRGK G G V + C H L G+V + RI
Sbjct: 35 WYFARYSEDLEPGQVLPVEFMSHQFALFRGKSGRVGMVDSQCCHMGADLGRCGTVVDDRI 94
Query: 120 QCPYHGWEYSTDGKCEKMPSTQLRNVKI------KSLPCFEQEGMIWIWPGDEPPTATIP 173
+C YH WE+ TDG CE +P L KI +++P E G IW W G EP +
Sbjct: 95 KCGYHAWEFRTDGGCEVIPG--LDQAKIPPRAGQRAIPVREHAGNIWFWYGPEPVGEFVE 152
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLL---DNLLDLAHAPFTHTST 215
+P + + + + ++ G LL +++ D+ H P H
Sbjct: 153 --VPYADSKKYLNLKGQIYTARGTLLPVAEHVSDIYHFPVAHKGV 195
>gi|227015857|gb|ACP17954.1| putative Rieske (2Fe-2S) protein [Pseudomonas nitroreducens]
Length = 353
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A++ +L + + EP VI+R D +++ CAHR PL LG
Sbjct: 3 IRNCWYVAAWTEELSAEFLT-CTIINEPIVIYRKSDNSLVALEDRCAHRMSPLSLGKREG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHG +S G C ++P + +KS P E+ IW+W GD P
Sbjct: 62 DDIRCMYHGLVFSPSGNCIEIPGQDKIPARLCVKSYPVVERHSWIWVWMGD--PELADED 119
Query: 175 LLPPSG-------FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
L+PP+ F H + E + L+ DNL D +H + HT +F
Sbjct: 120 LIPPAHGGGNNEWFLTHNHLDYE--TNYMLICDNLTDFSHLGYVHTQSFGS 168
>gi|395004285|ref|ZP_10388352.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
gi|394317811|gb|EJE54304.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
Length = 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 30/236 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ ++ D + C E+ V +R + + C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIADKPLGRTICGEK-MVFYRPAPDQVAALDDFCPHRGAPLSLGKVCDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
++ C YHG DGK MP +++ + ++ P E+ G IW+WPGD + A I
Sbjct: 63 QLMCGYHGLRVGCDGKAVSMPGQRVQGFPRTRNFPAVERYGFIWVWPGDAAQADPAKIHH 122
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK---- 227
L E + + + ++ L++DNL+DL H + H+++ + VP +
Sbjct: 123 LAWAESPEWAYGGGLYHIACDYRLMVDNLMDLTHETYVHSNSIGQKEIDEVPCKTRVEGD 182
Query: 228 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 264
F A + G D P+D F PP VL +G++ G
Sbjct: 183 EVITSRFMENIQAPPFWQMALRMNGLPDDQPVDRWQVCHFTPPSHVLIEVGVALAG 238
>gi|148557754|ref|YP_001265336.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502944|gb|ABQ71198.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 365
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 142/372 (38%), Gaps = 56/372 (15%)
Query: 35 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGI 94
+K R ++G P+ + N W+ F+ + D + P V +R G
Sbjct: 8 IKEASRRADARLAGRATPF---IFNCWYVAGFAWEFARD-LKARTILGRPLVFYRTSAGD 63
Query: 95 PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPC 152
P + + C HR+ PL ++ I C YHG Y + G C + P+ R + ++S P
Sbjct: 64 PVALSDRCVHRSFPLSKSQLDGDSIVCGYHGLRYDSGGACIEAPAVGECPRGIGVRSYPL 123
Query: 153 FEQEGMIWIWPGDEPPTATIPC-------LLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 205
+Q ++WIW GD P +P P S H LP + L +NLLDL
Sbjct: 124 RQQGPLVWIWMGDAAPADELPTGSWVADEQWPASQQYYH------LPASYVALHENLLDL 177
Query: 206 AHAPFTHTSTF------AKGWSVP--------SLVKFLTPA---------SGLQGYWDPY 242
H F H +F A ++V +L + + P +GL G
Sbjct: 178 THLSFLHAHSFGTPDYAAAPYAVDLDEDAGRFALTRSVVPTRLPPVWAEPTGLTGKDAAR 237
Query: 243 PIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
EF P + + E + R T + H+ P + T +F
Sbjct: 238 VTTSEFLGPSTHVVSAQFYGLDVAEAERGR---TGIRTAHLPTPETATSTHYFIHHGRNF 294
Query: 303 ASVLKHVP-FMQ-YLWRHFAEQV--LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 358
A V FMQ L F E V L E R++ E + + + + D+ G+
Sbjct: 295 AQDDPSVTDFMQEQLTVAFTEDVVGLTEIERMIAETPED-----DRYEISLASDRPGLAM 349
Query: 359 RLW--RDALEKG 368
R W R A+E+G
Sbjct: 350 RRWIYRTAMEEG 361
>gi|186684792|ref|YP_001867988.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186467244|gb|ACC83045.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 340
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ +FW+ VA S L+ + ++P E IFRG+DG P +++ C HR L G +
Sbjct: 2 QFADFWYIVALSNQLQPNKVLPRTVLGEWLAIFRGEDGQPVALRDRCLHRNSRLSSGKIC 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCF---EQEGMIWIWPGDEPPTA 170
G +QCPYHGW Y G +P+ + + C+ EQ+G +++ D P
Sbjct: 62 NGALQCPYHGWVYDGVGNVIAVPAEGNDFKPSPQRRAKCYATKEQDGYVYVRLADTPSVD 121
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF----------- 216
P +P +G+E ++ +N +D+ H F H F
Sbjct: 122 FEPFSMPHYGQTGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVFRTSRQQKLEMT 180
Query: 217 AKGWSVPSLVKFLTPASGLQGY 238
+ W+ LV++ S L Y
Sbjct: 181 VERWNGSVLVEYRNENSNLGWY 202
>gi|422652104|ref|ZP_16714892.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330965175|gb|EGH65435.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 354
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGEREKAD--PALI 120
Query: 177 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|383774963|ref|YP_005454032.1| dioxygenase [Bradyrhizobium sp. S23321]
gi|381363090|dbj|BAL79920.1| probable dioxygenase [Bradyrhizobium sp. S23321]
Length = 452
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ +GP P ++++W P A +L+ + + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGERPIRPVKLLGENLVLFRDETGRYGLIDRLC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
++W + G+ P A I C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 212 H 212
H
Sbjct: 184 H 184
>gi|347760510|ref|YP_004868071.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
gi|347579480|dbj|BAK83701.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
Length = 377
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA+S DLK D + P V+ R ++G + + C HR PL G+VN
Sbjct: 28 DFWYPVAWSADLKKDKTLAVSYAGTPIVLVRPEEGSVFALYDRCPHRQVPLSKGTVNGQT 87
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
++C YHGW + G+C +P +L N +++ P E G+I+I+PGD T+P
Sbjct: 88 VRCCYHGWAFGRSGRCIDVPYLGKGKLPN-GVRTFPVREAGGLIFIFPGDPEKADTVP 144
>gi|423435967|ref|ZP_17412948.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
gi|401123450|gb|EJQ31226.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
Length = 315
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 41/324 (12%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ V+++ D+K V + +V++R + G + C HR L LG V G++
Sbjct: 13 WYAVSYAKDIKK-IPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
CPYHGWE+ + G C ++PS + + S P E+ G+IWI+P E PP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQPNKPIPKFAHTSSYPVKEKIGLIWIYPDSEETPPEWKTFH 131
Query: 175 LLPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
++ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 132 VMENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAEST 181
Query: 232 ASGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLP 286
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 182 NYKLEGTLDQFIFSNGNAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTP 229
Query: 287 SSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN 346
++T + M + LK+ P + L F+ +VL ED +V Q R A
Sbjct: 230 IDEEETLI---MGYTGRTFLKYFPLLDLLLAKFSLRVLKEDQIIVESQHPRPIPEALKME 286
Query: 347 LPVGYDKLGVRYR-LWRDALEKGA 369
V D V++R W L+ G+
Sbjct: 287 AHVHADMAQVQFRKRWFQFLQNGS 310
>gi|340777444|ref|ZP_08697387.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
aceti NBRC 14818]
Length = 193
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA+S +LK + +P + R ++G +++ CAHR PL G V
Sbjct: 39 DFWYPVAWSRELKRGKTIGVRYAGQPIALIRPEEGNIFALEDRCAHRQVPLSKGHVQGQS 98
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QC YHGW Y G+C +P +L N +++ P EQ+G+I+++PGD T+
Sbjct: 99 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPVIEQDGLIFVFPGDPEKAKTV--H 155
Query: 176 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAH 207
LP + + E+ + + +NL+D+ H
Sbjct: 156 LPATLARVDDPAYKTRRFGQEVGCHYSFMHENLMDMNH 193
>gi|444913675|ref|ZP_21233824.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
gi|444715498|gb|ELW56364.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
Length = 341
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
RL + WF + S++L D + P V+FR +G P + + C HR PL LG V
Sbjct: 2 VRLPHSWFILCTSSELGDKPLARM-LQGSPLVLFRTAEGKPAALADRCPHRNVPLSLGRV 60
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSL-----PCFEQEGMIWIW--PGDEP 167
+G++QC YHGW + + G+C +P + + KS EQEG +W++ PG EP
Sbjct: 61 VKGQLQCGYHGWRFDSSGQCRAVPGL-IGEPEAKSRCATWHATREQEGFVWVYSTPGVEP 119
Query: 168 PTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P L P G+ + H LL+N LD+ H F H F
Sbjct: 120 SHEPYRFPLLDAP-GYSTVRRTLRAGGSLHA-LLENTLDVPHTSFLHGGLF 168
>gi|428310254|ref|YP_007121231.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428251866|gb|AFZ17825.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 383
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N+W+PV +++ LK ++P +++ ++R + G +++ C H+ LH G V
Sbjct: 24 NYWYPVGWASQLKPGDIMPVVIWQQAIAVYRDETGQIHALEDACPHKGIALHKGKVQGCH 83
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+ C YHGWE++ +G+C +P +L + +S P E+ +IW++PGD PT
Sbjct: 84 LTCAYHGWEFNGNGECVGIPYLPEGQKLPRAQARSYPVQEKYNLIWLFPGD--PTLAASQ 141
Query: 175 LLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 225
LP H + +M + + +N +D+ H F H + +GW P L
Sbjct: 142 ELPHVPEFDHPDYLMIPLAAHMQSHFSICNENAMDVFHG-FLHQNL--QGWFNPVL 194
>gi|292490010|ref|YP_003532902.1| vanillate O-demethylase oxygenase [Erwinia amylovora CFBP1430]
gi|292901031|ref|YP_003540400.1| (2Fe-2S)-binding protein [Erwinia amylovora ATCC 49946]
gi|428786997|ref|ZP_19004473.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ACW56400]
gi|291200879|emb|CBJ48014.1| putative (2Fe-2S) protein [Erwinia amylovora ATCC 49946]
gi|291555449|emb|CBA23914.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora CFBP1430]
gi|426274464|gb|EKV52206.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ACW56400]
Length = 344
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 32/303 (10%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL +W PVA + D+ V +EP VI+R DG ++ C HR PL LG +
Sbjct: 20 RLAGYWHPVALAADIGQ-APVKAVLLDEPLVIYR-IDGQVVVARDVCPHRGVPLTLGFHD 77
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWI----WPGDEP 167
+ I CPYHG + G+C ++PS+ + + K + E+ G+IW+ G P
Sbjct: 78 QAGIICPYHGLRFGEGGRCNRIPSSPEQAIPAKLHLLTYASEERYGLIWVCLAAAEGAVP 137
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSL 225
P +P +GF+ ++ G ++ LD+AH + HT TF A+ +VP
Sbjct: 138 PLPVMPH-WEDAGFQQIVCPHFDVAGFAGRQVEGFLDVAHFAWIHTETFADAENQAVPPY 196
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ-- 280
TP YW Y D E + P + ++ T H Q
Sbjct: 197 NPVETPYGFSVDYWSSVSNYSADSERQAP----EGFQWLRHFEMHLPFTATLTIHFPQQE 252
Query: 281 ----LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ- 335
++ P S +KTRL ++ +F H+P + F +V ED +V Q+
Sbjct: 253 KLVIMNAASPVSARKTRLFAPIARNFD---LHIPPEEV--HAFNHRVFEEDRLMVESQRP 307
Query: 336 ERM 338
ER+
Sbjct: 308 ERL 310
>gi|365881281|ref|ZP_09420602.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 375]
gi|365290555|emb|CCD93133.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 375]
Length = 452
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L + V + +V+F+ + G G + C HR
Sbjct: 14 GPSAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DGKC + P+ + +NV+ +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVDGKCLETPAEPVGSPLCQNVRQRSYPVVEKGGILWA 133
Query: 162 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAAPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|410686798|ref|YP_006963105.1| putative vanillate O-demethylase oxygenase chain A [Variovorax sp.
DB1]
gi|388482519|gb|AFK33042.1| putative vanillate O-demethylase oxygenase chain A [Variovorax sp.
DB1]
Length = 358
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KNFW+ A ++ ++ E+P V FR DG + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRH-LLARTLLEQPIVFFRRIDGSVAALADRCSHRRISLSLGRLIGD 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+QC YHG ++ DG C +P Q R + ++S P E++ +W WPGD PT
Sbjct: 63 EVQCGYHGLSFAGDGSCTGIPG-QARVPPSACVRSYPVVERDEFVWFWPGD--PTLADEA 119
Query: 175 LLPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 215
L+P + + P E L+ ++N+LDL+H + H T
Sbjct: 120 LVPDYSEICSSGRFVGRPAEPLLVEAPCLFNIENVLDLSHVTYAHQET 167
>gi|326794461|ref|YP_004312281.1| Vanillate monooxygenase [Marinomonas mediterranea MMB-1]
gi|326545225|gb|ADZ90445.1| Vanillate monooxygenase [Marinomonas mediterranea MMB-1]
Length = 372
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 29/237 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ A S ++ + + E +R K V + C HR L LG V +G
Sbjct: 8 KNAWYVAAMSEEIGLEKPLGRKVCGERIAFYRPKPNEVAAVLDFCPHRGAALSLGYVEDG 67
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGD--EPPTATIPC 174
+ C YHG + DGK + MP +++ +K+ E G IW+WPGD + + IP
Sbjct: 68 LLVCGYHGLKIGEDGKTKAMPLQRVQGFPCMKAYAVEELYGFIWVWPGDQSQADASLIPR 127
Query: 175 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK------ 227
L S + + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 128 LEWAESDDWAYGGGLYHIKCDYRLMIDNLMDLTHETYVHASSIGQKEIDESPVSTQSEGD 187
Query: 228 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
F A G D P+D F PP V+ +G++ GK
Sbjct: 188 EVITSRYMENIMAPPFWQAALRANGLADDVPVDRWQRCRFTPPSNVMIDVGVAHAGK 244
>gi|312174201|emb|CBX82454.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ATCC BAA-2158]
Length = 344
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 32/303 (10%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL +W PVA + D+ V +EP VI+R DG ++ C HR PL LG +
Sbjct: 20 RLAGYWHPVALAADIGQ-APVKAVLLDEPLVIYR-IDGQVVVARDVCPHRGVPLTLGFHD 77
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWI----WPGDEP 167
+ I CPYHG + G+C ++PS+ + + K + E+ G+IW+ G P
Sbjct: 78 QAGIICPYHGLRFGEGGRCNRIPSSPEQAIPAKLHLLTYASEERYGLIWVCLAAAEGAVP 137
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSL 225
P +P +GF+ ++ G ++ LD+AH + HT TF A+ +VP
Sbjct: 138 PLPVMPH-WEDAGFQQIVCPHFDVAGFAGRQVEGFLDVAHFAWIHTETFADAENQAVPPY 196
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ-- 280
TP YW Y D E + P + ++ T H Q
Sbjct: 197 NPVETPYGFSVDYWSSVSNYSADSERQAP----EGFQWLRHFEMHLPFTATLTIHFPQQE 252
Query: 281 ----LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ- 335
++ P S +KTRL ++ +F H+P + F +V ED +V Q+
Sbjct: 253 KLVIMNAASPVSARKTRLFAPIARNFD---LHIPPEEV--HAFNHRVFEEDRLMVESQRP 307
Query: 336 ERM 338
ER+
Sbjct: 308 ERL 310
>gi|218441166|ref|YP_002379495.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218173894|gb|ACK72627.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ VA S ++K + + + VI+R + G+ ++++C HR L G++
Sbjct: 16 RNHWYVVARSCEVKAQP-ISITLWYQKIVIYRDQAGMIHALEDSCPHRLVKLSQGAIVGN 74
Query: 118 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDE---PPTA 170
I+C YHGW ++ +GKC +P + +L +I+S P E +G IW++PGD+ +
Sbjct: 75 EIECAYHGWRFNGEGKCTLIPYLNENQKLPPCQIRSYPVQELDGFIWVFPGDKNYLNQES 134
Query: 171 TIPCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
P +P I +++ P L++NL+D+ H H + W+ L
Sbjct: 135 VQPMGVPEWEHLNYIATVSIIDCPSHFSFLIENLMDMYHG---HLHDNYQAWTSAKLQNL 191
Query: 229 LTPASGLQGYWDP---YPID 245
+ + Y+D Y ID
Sbjct: 192 SVNLNRVDAYYDAQSYYTID 211
>gi|407697725|ref|YP_006822513.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
gi|407255063|gb|AFT72170.1| Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
Length = 348
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+ FW+PV L D PF E V++ +G P ++ CAHR L LG V
Sbjct: 9 LRRFWYPVMPLEQLGDGPQ-PFRLMNEELVLWLDSEGKPHAAEDRCAHRTARLSLGWVEG 67
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
I CPYHGW Y G C ++P T R+ K+++ + G +W+ GD P IP
Sbjct: 68 DNIVCPYHGWTYDGGGGCVRIPQTPDRSAGRAKVRAFNAEARYGYVWVCLGD--PLTDIP 125
Query: 174 CLLPPSGFEIHAEIV---MELPIEHGL-LLDNLLDLAHAPFTHTSTFAK 218
+ P E ++ E+ GL L++N D AH F H +F +
Sbjct: 126 HM--PEADEPGYRVIHQFYEVWRTAGLRLMENSFDNAHFSFVHRESFGQ 172
>gi|170722290|ref|YP_001749978.1| vanillate monooxygenase [Pseudomonas putida W619]
gi|169760293|gb|ACA73609.1| Vanillate monooxygenase [Pseudomonas putida W619]
Length = 358
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A +LKD V + V+FR DG ++N C HRA PL G++ G
Sbjct: 24 NQWYVAALGWELKDRP-VGRTLLNKSVVMFRTADGKVAALENRCCHRALPLSDGTLEAGG 82
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
++C YHG ++ +GKC ++P K+ + E++ ++WIW P P
Sbjct: 83 LRCGYHGLLFNDEGKCIEIPGQDKIPSKAKVAAFHVVEKDQIVWIWFAS--PEHPEPTTE 140
Query: 177 PPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
PPS ++IH+ V + L+ DNL+DL+H + H T S+
Sbjct: 141 PPS-YDIHSSGDYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLRTIGGNASI 192
>gi|408527957|emb|CCK26131.1| alpha-subunit oxygenase [Streptomyces davawensis JCM 4913]
Length = 356
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 114
+N W+ A+S ++ + + EP V +R + DG + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LFGRRVLGEPLVFYRTEGDGTVIALNDRCVHRRYPLSEAPTRL 67
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 172
+ R+ C YHG+ Y T G C +P + R +I S P EQ+ ++W+W GD P
Sbjct: 68 DGDRVVCGYHGFTYDTTGTCVYVPGQKRIPRTARIASYPVVEQDSLVWVWIGD--PDLAD 125
Query: 173 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 212
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 PRSIPRARHLDSPGWVTVRG---MEPIACDYGLLVDNLLDLSHETYLHGGYIGTPEVAET 182
Query: 213 --TSTFAKGWSVPSLVK---------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTI 258
T+ +G + + + F ++G++G W D+E+ PC+ L
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAECPPFYAKSTGIEGRIMRWQ----DIEYHAPCLYLLHS 238
Query: 259 GISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 304
++ G + E + H + PS + + +S D+A+
Sbjct: 239 RVAPVGVVPEVDGSDPGGFHTEITYAITPSGDGEVYDFWAVSRDWAT 285
>gi|149921338|ref|ZP_01909792.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817771|gb|EDM77235.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 360
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
++N W+ A+S++L PF ++ R ++G+ G + C HR L G
Sbjct: 4 VRNAWYVAAWSSELGRK---PFARTLLGRHVMLIRTREGVVG-LGAQCPHRHADLSTGEF 59
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF---EQEGMIWIWPGDEPPTAT 171
+GRI+CPYHGW + G+C ++P T R K LP + E++GMIW+W G+ PT +
Sbjct: 60 GKGRIRCPYHGWSFDMQGRCVEVPGTS-RVPKAACLPRYPARERQGMIWVWFGEGEPTPS 118
Query: 172 IPCLLPPSGFEIHAEIVMEL--------PIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
PPS FE M + + L++N LD H TH T W+
Sbjct: 119 ----EPPS-FEFSPSQRMRRQRTPPRLWEVSYVDLVENTLDPTHITATHARTLGSRWA 171
>gi|167566723|ref|ZP_02359639.1| Rieske (2Fe-2S) domain protein [Burkholderia oklahomensis EO147]
Length = 382
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 23 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 82
A P ++D V R V P+ P + W+P+A+S ++K +
Sbjct: 3 AGPLLDSSAIDPVASAPVRDLRRV--PIHP------DHWYPLAWSKEVKRGKALGVHFAG 54
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---S 139
+P V+ R + G +++ CAHR PLH G V I+C YHGW Y G C +P
Sbjct: 55 DPIVLVRTRSGTIFALEDRCAHRQVPLHAGVVEGESIRCGYHGWTYDCSGHCVDVPYIGR 114
Query: 140 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 196
+L N +++ PC E G+I+++PGD P S + + E+ +
Sbjct: 115 ARLPN-GVRAYPCREAHGLIFVFPGDAALAEERPLPALASAADKAYKTRRFGREVKCHYS 173
Query: 197 LLLDNLLDLAH 207
+ +NL+D+ H
Sbjct: 174 FMHENLMDMNH 184
>gi|404213336|ref|YP_006667511.1| Phenylpropionate dioxygenase-related ring- hydroxylating
dioxygenase, large terminal subunit [Gordonia sp. KTR9]
gi|403644135|gb|AFR47375.1| Phenylpropionate dioxygenase-related ring- hydroxylating
dioxygenase, large terminal subunit [Gordonia sp. KTR9]
Length = 425
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDL--KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
GP ++N+W P S+ L D + F E +V FRG+DG+ G + C HR
Sbjct: 13 GPGTAMGAVVRNYWLPAFPSSRLPATDSDPIRVRLFGENYVAFRGEDGVIGFLDELCPHR 72
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRN-VKIKSLPCFEQEGMIWI 161
PL LG I+C YHGW+ TDG + P S+ +RN +K + P E G++W+
Sbjct: 73 GAPLVLGHQEGCAIRCLYHGWKIGTDGTVLETPNADSSAIRNGLKANAFPVEESHGLVWV 132
Query: 162 WPGDEPPTATIPCLLPPSGFEIHA---EIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 216
+ G + P P +E+ +V+++ + + L+ LLD +HA H
Sbjct: 133 YLGTQDPVPPRPRY----AWEMEKPENTLVVDVDWDCNWVQALEGLLDSSHAGILHADIL 188
Query: 217 AK 218
K
Sbjct: 189 KK 190
>gi|443316742|ref|ZP_21046175.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783653|gb|ELR93560.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 362
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA + ++ D +++ V+FR ++ +++ C HR L G V G
Sbjct: 28 NHWYAVARADEVTADKPRGVTLWQQKIVLFRDRNHQVQALEDRCPHRQVQLSHGEVVNGE 87
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 171
++C YHGW + G C +P + +L ++ P EQ+G IW++PGDE A
Sbjct: 88 VECVYHGWRFDATGACTHVPYLGEAQKLPTCTLRRYPVREQDGFIWVFPGDEARLAAEKI 147
Query: 172 IPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHA 208
P LP + V + +E + L++NL+D+ H
Sbjct: 148 EPLALPEWDHLNYIATVSLIDVESHYSFLIENLMDMYHG 186
>gi|375101692|ref|ZP_09747955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
gi|374662424|gb|EHR62302.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
Length = 377
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 127/326 (38%), Gaps = 61/326 (18%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
+N W+ A+ ++ + P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDHEVTTKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKILGD 85
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
+QCPYHG Y++ G+C MP+ + N + + P E+ +W+W G+ P P
Sbjct: 86 ELQCPYHGLRYNSTGRCTGMPAQETINPSAMVPAYPVVERYRYVWVWVGE--PDLADPAA 143
Query: 176 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 218
+P G IHA+ + L+LDNL+DL H F H S+ +
Sbjct: 144 VPDMHQMDDPAWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHASSIGQEELSEA 197
Query: 219 -------GWSVPSLVKFLTPAS--------------GLQGYWDPYPIDMEFRPPCMVLST 257
G +V ++ +++ G +G D + I + F P +
Sbjct: 198 EFDVVHEGNTV-TVTRWMRDIDAPPFWLKNMRDKFPGFEGKVDRWQI-IRFEAPSTICID 255
Query: 258 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQ 313
+G++K G + R + + ++ P + + + LD ++ +
Sbjct: 256 VGVAKAGTGAPEGDRSQGVNGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQL---- 311
Query: 314 YLWRHFAEQVLNEDLRLVLGQQERMN 339
R V ED ++ QQ ++
Sbjct: 312 ---RQSVHGVFAEDEDMLRAQQSAID 334
>gi|188579895|ref|YP_001923340.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium populi
BJ001]
gi|179343393|gb|ACB78805.1| Rieske (2Fe-2S) domain protein [Methylobacterium populi BJ001]
Length = 361
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 41/346 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ ++ + M E V+ RGKDG +++ C HR L G +
Sbjct: 24 LPNAWYCAGQASAVAGGKMRAVALNGEQVVLGRGKDGALFALRDRCPHRGMALSKGKFDG 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CP+HGW + TDG+C +P ++ + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSEHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 227
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 EAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 228 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
P +S + P +++EFR P + L I K G T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI---KAG------TK 254
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAAREGRPFANPL 352
>gi|89053936|ref|YP_509387.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863485|gb|ABD54362.1| putative dioxygenase [Jannaschia sp. CCS1]
Length = 437
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDT-MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P L+ +W P A S +L +VP E V+FR + G G + C HR
Sbjct: 14 GPGAPAGKVLRRYWQPAALSDELMGARPVVPVTLIGEELVLFRDEGGSLGLIGRHCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + + ++CP+HGW + G+C + P S + +K S P E G+IW
Sbjct: 74 ADLAYGRLEDNGLRCPFHGWHFDCSGQCVEQPGEPEGSKMHQQIKAVSYPVRELNGIIWA 133
Query: 162 W--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ GD PP A C P + + E + + +D AHA F H
Sbjct: 134 YMGEGDPPPFAAFDCFRAPDTHVFAFKGLWECNWLQAMEVG--IDPAHASFLH 184
>gi|84683562|ref|ZP_01011465.1| Rieske (2Fe-2S) region protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84668305|gb|EAQ14772.1| Rieske (2Fe-2S) region protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 429
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
P ++ +W P+A S +L + P + E V+FR +G G +Q +C HR L
Sbjct: 18 PMGKVMRRYWHPIALSEELPEPDCKPIRAELLGEKLVVFRDSEGKVGVLQESCMHRGASL 77
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWIW--- 162
LG V +G ++C YHGW+++ DG P+ VK + PCF E+ G+IW
Sbjct: 78 ALGRVEDGGVRCLYHGWKFAVDGTILDTPNNPDPRVKQRLKQPCFPVREEGGLIWTVVGA 137
Query: 163 -PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
G+EPP + P+ E + + + + L + D +H H + + GW
Sbjct: 138 KKGEEPPFRRYSFMDAPA--EHRLALRINVKCNYLQLWEGGADSSHVGILHAESASPGW 194
>gi|399078115|ref|ZP_10752715.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034053|gb|EJL27330.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 338
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 124/312 (39%), Gaps = 50/312 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ A++ ++ D T + P + +R DG +++ C HR PL +G + +
Sbjct: 4 LYNAWYVAAWAHEI-DQTFFTRTLLDLPVLFYRKPDGQVVAMEDACPHRFAPLSMGVLVD 62
Query: 117 GRIQCPYHGWEYSTDGKCEK--MPSTQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTATI 172
G+++C YHG E+ G C + + ++++ P FEQ+ +IWIW PG PT I
Sbjct: 63 GKVRCGYHGLEFDEHGACVGSCINVVAPKAARVRTFPVFEQDNIIWIWMGPGPAGPTEAI 122
Query: 173 PCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHT-----------S 214
F H + V ++ L DNL+DL H H
Sbjct: 123 ------VRFPFHTDSALRPVFGVSAAKADYRLFSDNLMDLTHTAMLHPLFGGLNYQPKFR 176
Query: 215 TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG------KLEG 268
++ +G V S P+S L G P + TI PG ++
Sbjct: 177 SWEEGDDVVSEYTSEAPSSMLVG-----------DTPVTGVDTIRWRAPGIHSLLTRVTP 225
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
++ A + H+ P + T + +L S + F+ L + F +ED
Sbjct: 226 KDAAFQAAEMPAAHIVTPETATSTHYFWASALPKDSPVSSEAFLASLTQVFD----HEDK 281
Query: 329 RLVLGQQERMNN 340
++ Q RM
Sbjct: 282 PMIEAVQRRMGQ 293
>gi|158317433|ref|YP_001509941.1| Rieske (2Fe-2S) domain-containing protein [Frankia sp. EAN1pec]
gi|158112838|gb|ABW15035.1| Rieske (2Fe-2S) domain protein [Frankia sp. EAN1pec]
Length = 353
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 46 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 105
++G + + L++ W PVA S +L D+ + EPWV+ R D + + C HR
Sbjct: 1 MTGRLTNTDPALRHGWHPVARSPELADEPIA-VRLLGEPWVLARLDDQV-AAFADWCPHR 58
Query: 106 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMI 159
PL G V + C YHGW + G+C +P+ R I E+ G++
Sbjct: 59 LAPLSAGRVEGHELVCGYHGWRFVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLV 118
Query: 160 WIWPGDEPPTATIPCLLPPS---GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
WI P + P A I LP + GF+ GLL DN LD AH PF H +T
Sbjct: 119 WIAPAE--PFADI-IELPEAAEDGFDDAWLPAARTTACAGLLADNFLDTAHFPFVHAATI 175
Query: 217 AKG 219
G
Sbjct: 176 GAG 178
>gi|434389375|ref|YP_007099986.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428020365|gb|AFY96459.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 363
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 41/305 (13%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ + +K M+ EP V R + G +++ C HRA PL G +
Sbjct: 22 LRNIWYYALPAERIKAGQMLAKQLLGEPVVFGRTQAGEVFALRDICPHRAVPLSCGRFDG 81
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIWPGD----- 165
I+C YHGW + G C +P+ L +++ P E +G IWI+ D
Sbjct: 82 KEIECAYHGWRFDDGGTCTAIPALNDDRDLDLSKFQVRRYPVREVQGNIWIYMSDLDRCD 141
Query: 166 -EPPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
P T+P + G + M+ P I+H ++ L+D +H PF H + + W
Sbjct: 142 EREPQQTVPEIAGFEGVTHQSTFTMKFPCFIDHAVV--GLMDPSHVPFVHRAWW---WRS 196
Query: 223 PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---------KLEGQNTRQ 273
+++ A +DP P R + T G +L G Q
Sbjct: 197 DTILTDEIKA------FDPSPYGFTMRRHRLERQTFFYRLLGGDAEVEIAFRLPGVRIEQ 250
Query: 274 CATHLHQ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
T+ ++ L V P S +T + + F + + +++L + F L +D +
Sbjct: 251 IVTNTNRVCNLTVITPISETETEV----TTMFYTTIPWFKPLRWLIQPFITTFLGQDRDM 306
Query: 331 VLGQQ 335
V+ QQ
Sbjct: 307 VVKQQ 311
>gi|434404042|ref|YP_007146927.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428258297|gb|AFZ24247.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 340
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ +FW+ VA S L+ + ++ E IFRG+DG +++ C HR+ L G V
Sbjct: 2 QFADFWYIVALSDHLQPNKVLARSLLGEWLAIFRGEDGQAVALRDRCLHRSSRLSAGKVC 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPS-------TQLRNVKIKSLPCFEQEGMIWIWPGDEPP 168
+G +QCPYHGW Y +G +PS +Q R + K P EQ+G +++ + P
Sbjct: 62 DGALQCPYHGWIYDRNGTVIAVPSEGDSFKPSQQR--QAKHYPTREQDGYVYVRLAETPS 119
Query: 169 TATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P +P G+E ++ +N +D+ H F H F
Sbjct: 120 VDLEPFAMPHYQERGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVF 169
>gi|399156766|ref|ZP_10756833.1| iron-sulfur protein [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 449
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 40 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
P + L GP P L+ FW PV + DL D V E V+FR G G V
Sbjct: 22 PDEELTQVGPETPCGEYLRRFWHPVYLTNDLCD-LPVTLKILGEELVLFRDLSGTLGLVH 80
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP------STQLR-NVKIKSLPC 152
C HR L G E I+C YHGW + TDGK P S +L+ +K+ + P
Sbjct: 81 KRCPHRQASLEYGKCEEHGIRCCYHGWHFDTDGKLLDAPGQPENLSDRLKLRIKLGAYPV 140
Query: 153 FEQEGMIWIWPGDEPPTATIPC--LLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHA 208
E +G+I+ + G P A +P + FE + + P L LD +LD H
Sbjct: 141 VEYKGLIFSYMG---PIAEMPEFPVFDSMEFEKMEMVPYKAPFRCNWLQVLDAILDPLHT 197
Query: 209 PFTHTST----FAKGWSVPSLVKFL 229
F H++ F++G+ + F
Sbjct: 198 SFLHSNIGRVQFSEGFGEVGQMDFF 222
>gi|307726787|ref|YP_003910000.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307587312|gb|ADN60709.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 402
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL- 175
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD P A + L
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD-PAMAEVRPLP 166
Query: 176 -LPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAH 207
L + + P+ + + +NL+D+ H
Sbjct: 167 KLGSVADKKYKTRRFGRPVNCHYSFMHENLMDMNH 201
>gi|374984177|ref|YP_004959672.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
gi|297154829|gb|ADI04541.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
Length = 450
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQN 100
K L +GP P ++ +W P+A S +L +V + V+FR G G V
Sbjct: 7 KRLTRTGPGTPAGEWMRRYWQPIALSEELDGIRPLVAPKVMGQDLVLFRDDGGRLGLVDR 66
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC-----EKMPSTQLRNVKIKSLPCFEQ 155
C HR L LG + +G ++C +HGW + DG C E + ST V + S P E+
Sbjct: 67 GCPHRGADLSLGRLEDGGLRCCFHGWLFGRDGSCLDTPAEPVGSTLASRVTLGSYPVRER 126
Query: 156 EGMIW--IWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
G+IW + PG+ P + C P+ + ++E L + +D AHA + H
Sbjct: 127 NGIIWGYLGPGEPPELPALDCFRAPADRAFAWKGLLECNWLQALEVG--IDPAHASYLH 183
>gi|367476973|ref|ZP_09476338.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
gi|365270752|emb|CCD88806.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
Length = 452
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L + V + +V+F+ G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQQFVLFKDAQGRYGLLDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DG+C + P S +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCSFHGWLFDVDGQCLETPAEPAGSPLCKNVKQRSYPVIEKGGILWA 133
Query: 162 WPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
W G+ P A + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAPPAFPDLDCFTAPDTYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|254775483|ref|ZP_05216999.1| oxygenase KshA [Mycobacterium avium subsp. avium ATCC 25291]
Length = 370
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 50 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
Q TR W + D D P + F + V+FRG DG + C H L
Sbjct: 12 AQAVPTRFARGWHCLGLIRDFGDGKPHPINAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 71
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 166
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 72 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 131
Query: 167 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 132 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 184
>gi|374309126|ref|YP_005055556.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358751136|gb|AEU34526.1| Rieske (2Fe-2S) iron-sulfur domain protein [Granulicella mallensis
MP5ACTX8]
Length = 383
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 38/350 (10%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+P ++ LK P ++ R DG +++ C HR PL G + +Q
Sbjct: 34 WYPALRASSLKRKDTAVTTLLGIPMLLGRKSDGALFAMRDLCPHRGIPLSAGWFDGETVQ 93
Query: 121 CPYHGWEYS-TDGKCEKMPS----TQLRNVKI--KSLPCFEQEGMIWIW-----PGDEPP 168
C YHGW + G+C+++PS L KI S P E++G W++ G
Sbjct: 94 CKYHGWRFEPCSGQCQEIPSLTSHDSLEPTKIYANSFPVVERDGYAWVYVPEAGAGRVTE 153
Query: 169 TATIPCL--LPPSGFEIH-AEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAK-GWSV 222
AT+P + LP G A + ELP ++HG++ L+D AH PF H + + + S+
Sbjct: 154 EATLPPVPELPKFGSRFRSAHLQAELPCNVDHGII--GLMDPAHGPFVHRAWWWRSAASI 211
Query: 223 PSLVKFLTPASGLQ------GYW--------DPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
K P L+ G+ + P + RP M+ + + +
Sbjct: 212 HEKTKKFEPIEDLEHDGFNAGFRMSPHAPSSNSAPYRLLGRPVTMIDFVLPNRRYETILA 271
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 328
+N R L P + R+ + D A HVPF+ + R+F + + +D
Sbjct: 272 ENARGKKRWFSSLTTVTPVTASTCRIDVIAAWDIA---YHVPFVTPIARYFGAKFVQQDQ 328
Query: 329 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
+ ++ Q + + + L DK Y + KG + P +P+
Sbjct: 329 QTMIEQARGLRSNPGL-MLIDDADKPAKWYFALKQRRLKGIGEHPLSEPV 377
>gi|118464956|ref|YP_882223.1| oxygenase KshA [Mycobacterium avium 104]
gi|118166243|gb|ABK67140.1| oxygenase KshA [Mycobacterium avium 104]
Length = 370
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 50 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
Q TR W + D D P + F + V+FRG DG + C H L
Sbjct: 12 AQAVPTRFARGWHCLGLIRDFGDGKPHPINAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 71
Query: 110 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 166
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 72 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 131
Query: 167 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 132 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 184
>gi|385206143|ref|ZP_10033013.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385186034|gb|EIF35308.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 406
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTEAGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 165
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCHEVEGLIFVFPGD 160
>gi|407709852|ref|YP_006793716.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407238535|gb|AFT88733.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 402
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 165
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|428310783|ref|YP_007121760.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428252395|gb|AFZ18354.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ ++FW+ +A S L + ++ E IFR ++G +++ C HR L G V
Sbjct: 2 KFEDFWYIIALSKQLPPNKILQRTLLGEWLAIFRDENGKAVALRDRCMHRNSRLSCGKVR 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+G+IQCPYHGW Y GK +PS L ++KS EQ+G I++ D
Sbjct: 62 QGKIQCPYHGWIYDNTGKIMAVPSEGKDFQPLSTRQVKSYQTKEQDGYIYVQLSDNKSEE 121
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
P +P G+E ++ +N +D+ H F H F
Sbjct: 122 FAPFAMPYYQEPGWET-VRVINRFRNNVTNCAENFIDIPHTAFVHPGVF 169
>gi|323529012|ref|YP_004231164.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323386014|gb|ADX58104.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 402
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 165
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|444351433|ref|YP_007387577.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
gi|443902263|emb|CCG30037.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
Length = 345
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 138/343 (40%), Gaps = 48/343 (13%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA S D+ V +E +I+R + + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARSADIGPQP-VKATLLDEKLIIYRLHERV-VVARDVCPHRGVPLTLGFHD 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCFEQE---GMIWI---WPGDEPP 168
I CPYHG + DG+C ++PS+ + + K +L C+ E G++W+ + D PP
Sbjct: 79 AEGIICPYHGLRFGEDGRCNRIPSSPNQPIPAKLNLTCYAAEEHYGLVWVCLDYDADNPP 138
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLV 226
GF+ E+ G ++ LD+AH + HT TF A+ VP +
Sbjct: 139 RLPTMPHWADDGFQQLTCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADAENQQVPDYL 198
Query: 227 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 271
T + YW YP +R P +T+ I PG+
Sbjct: 199 PEETENGFVVDYWSTVGNYPASAGYRAPEGFQWLRRFEMHLPFTATLTIHFPGE------ 252
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEVY--AFNLRVFEEDRLMV 303
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
Q+ + D+ + YR +G K+L F
Sbjct: 304 ESQRPETLPLDLTLEAHIPADRSSIAYR-------RGLKRLGF 339
>gi|386399158|ref|ZP_10083936.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
gi|385739784|gb|EIG59980.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
Length = 445
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 113/275 (41%), Gaps = 44/275 (16%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQ 99
K L SGP L+ FW PV S +L + P E + FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSEELPELDGEPKKIIVLGEELLAFRDTRGVVGLID 67
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 154
C HR L LG E I+C YHGW++ TDG+C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLIRIKSYPARE 127
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 202
MIW + G +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMGPADAMPELPDL----------EMAL-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 203 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 255
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHAAGL 235
Query: 256 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 288
+ G G+L G++ + A L H PS+
Sbjct: 236 TIAG----GRLTGRDDIYWRIAQFLMPFHAYAPSA 266
>gi|72384130|ref|YP_293484.1| phthalate 4,5-dioxygenase [Ralstonia eutropha JMP134]
gi|72123473|gb|AAZ65627.1| Phthalate 4,5-dioxygenase [Ralstonia eutropha JMP134]
Length = 437
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 43 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKD--DTMVPFDCFEEPWVIFRGKDGIPGCVQN 100
+L+ GP ++ W P S+ L++ + V E V FR K G G Q
Sbjct: 9 TLSRVGPGSKVGALFRSVWLPALLSSQLQEPGGSPVRLKLLGEELVAFRTKKGEVGITQA 68
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM---PSTQL-RNVKIKSLPCFEQE 156
CAHR PL+ G V + I+C YHGW Y++ G+C +M P + VKIK+ P E+
Sbjct: 69 NCAHRLAPLYYGRVEDDGIRCNYHGWLYNSKGQCLEMQNEPDKAICSKVKIKAYPVAEKA 128
Query: 157 GMIWIW--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
++WI+ G+ P P + P + E G ++ LD +H HT+
Sbjct: 129 DIVWIYMGEGEAPELPKFPWIDLPKSQRNATVWIQESNWLQG--MEGELDSSHVSILHTN 186
>gi|170690827|ref|ZP_02881993.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144076|gb|EDT12238.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 402
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATI---P 173
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD P A + P
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD-PAMAEVRPLP 166
Query: 174 CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAH 207
L S + + + + +NL+D+ H
Sbjct: 167 TLGSVSDKKYKTRRFGRPVNCHYSFMHENLMDMNH 201
>gi|167573798|ref|ZP_02366672.1| Rieske (2Fe-2S) domain protein [Burkholderia oklahomensis C6786]
Length = 377
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S ++K + +P V+ R + G +++ CAHR PLH G V
Sbjct: 26 DHWYPLAWSNEVKRGKALGVHFAGDPIVLVRTRSGTIFALEDRCAHRQVPLHAGVVEGES 85
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--IP 173
I+C YHGW Y G C +P +L N +++ PC E G+I+++PGD +P
Sbjct: 86 IRCGYHGWTYDCSGHCVDVPYIGRARLPN-GVRAYPCREAHGLIFVFPGDAALAEERPLP 144
Query: 174 CLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAH 207
L + E+ + + +NL+D+ H
Sbjct: 145 ALASAADKAYKTRRFGREVKCHYSFMHENLMDMNH 179
>gi|224056994|ref|XP_002299108.1| predicted protein [Populus trichocarpa]
gi|222846366|gb|EEE83913.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 140/362 (38%), Gaps = 71/362 (19%)
Query: 61 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
W+PV DL D +V +D E W +F N C HR PL
Sbjct: 30 WYPVMPVCDLDKRAPHAKKVMGLDIVVWWDKNESSWRVF----------NNACPHRMAPL 79
Query: 110 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPS--------TQLRNVKIKSLPCFEQEGMIW 160
G V++ GR+QC YHGW ++ G C +P + + + P ++W
Sbjct: 80 SEGRVDQWGRLQCVYHGWCFNGSGNCNFIPQAPTDGPPVSTSKKACVAVYPSTVHHDIVW 139
Query: 161 IWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
WP +P IP L PS +I +LP + +L++NL+D AH P+
Sbjct: 140 FWPNTDPQYKDIILKKQPPFIPELDDPSYIKITGS--RDLPYGYEVLIENLMDPAHVPYA 197
Query: 212 HTSTF--------------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 257
H +G S L G G + I+ +F PC+ +
Sbjct: 198 HYGIMRTRQPKGILRLKADREGGSPVELSIKKLDIDGFIGNQVQFGIN-KFIAPCISYAD 256
Query: 258 I------GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 311
G E + + Q L + C+P S +RL++ + ++ + VP
Sbjct: 257 SSPVVDQGDDAIADTEKKPSMQRREAL--IFFCVPVSPGNSRLIWAIPKNYGVWIAKVP- 313
Query: 312 MQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLWRDALE 366
+++ VL+ DL L+ L +++ M GA+ W +P D V +R W +
Sbjct: 314 -RFIHHSVTNIVLDSDLYLLHLEERKIMEIGASNWQKACFVPAKSDAFVVGFRKWLNKYA 372
Query: 367 KG 368
G
Sbjct: 373 GG 374
>gi|187921712|ref|YP_001890744.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720150|gb|ACD21373.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 406
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 165
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREIEGLIFVFPGD 160
>gi|121608456|ref|YP_996263.1| Rieske (2Fe-2S) domain-containing protein [Verminephrobacter
eiseniae EF01-2]
gi|121553096|gb|ABM57245.1| Rieske (2Fe-2S) domain protein [Verminephrobacter eiseniae EF01-2]
Length = 343
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 126/334 (37%), Gaps = 39/334 (11%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 117
KN W+ VA + D + + +P V +R +++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIAEQPLGRKVCGQPIVFYRPAPDRVAALEDFCPHRGAPLSLGRVCDG 62
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQLRN-VKIKSLPCFEQEGMIWIWPGDEP---PTATIP 173
+ C YHG DG+ MP +++ + +S P E+ G IW+WPGD P +
Sbjct: 63 ELTCGYHGLRVGCDGRALSMPGQRVQGFARTRSFPVVERYGFIWVWPGDAALADPARIVH 122
Query: 174 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 212
+ + ++ L++DNL+DL H + H
Sbjct: 123 LHWADNPEWAFGGGRYHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPCKTHMAGD 182
Query: 213 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 265
TS F G P F A + G D P+D F PP VL +G++ G
Sbjct: 183 EVITSRFMPGIQAPP---FWQMALRMNGLPDDQPVDRWQICHFTPPSHVLIEVGVALAGL 239
Query: 266 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 325
+ + P + + M+ F P + R ++
Sbjct: 240 GGHEAAADKKVACIVVDFITPETETSIHYFWGMARHFNP---QDPTLTARIREGQGKIFA 296
Query: 326 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
ED +++ QQ+ + + L + D GV+ R
Sbjct: 297 EDRQMLEMQQQNLLHYPERKLLTLNIDAGGVQSR 330
>gi|21241085|ref|NP_640667.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106382|gb|AAM35203.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 350
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 135/337 (40%), Gaps = 54/337 (16%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 112
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 168
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 169 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 220
+ +PP GF+ ++ L+ +D+AH F T+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVRTATFAQPDKR 195
Query: 221 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 262
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 263 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 322
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|242037721|ref|XP_002466255.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
gi|241920109|gb|EER93253.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
Length = 525
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 40/298 (13%)
Query: 100 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLR--------NVKIKSL 150
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 128 DACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSPKACVASY 187
Query: 151 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 201
PC Q ++W +P +P + P +P P ++ + +LP + +L++N
Sbjct: 188 PCVVQNNILWFYPRADPEYKDVLQRKRPPFIPEIDDPEFVTVYG--IRDLPYGYDILIEN 245
Query: 202 LLDLAHAPFTHTST------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-MEFRPPCMV 254
LLD AH P+ H + + PS +K + +QG+ P +F PC
Sbjct: 246 LLDPAHVPYAHKGIIRGILEYDREGGGPSKMKI--EQANIQGFVSPQERGYFQFVAPCT- 302
Query: 255 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 314
+ P ++ ++ + + +C+P S ++R+++ + L H+ ++
Sbjct: 303 ----SFAAPFPQPQEDKKKKVPRVMLVFLCIPVSPGRSRVIWAFPRNIGVWLHHIT-PRW 357
Query: 315 LWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLWRDALEK 367
L+ VL+ D+ L+ ++ + ++N +P D + V +R W K
Sbjct: 358 LYHVGQNLVLDSDIFLLHVEERKFATVGLDNWQKACYVPTSSDSMVVAFRNWFKKFSK 415
>gi|374288505|ref|YP_005035590.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
gi|301167046|emb|CBW26625.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
Length = 345
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
KNFW+ S +L + ++ +E +FRG DG P +Q+ C HR L G V +
Sbjct: 9 FKNFWYIACESKELGKNQVLARTILDEWIALFRGDDGAPVALQDRCIHRNSQLSKGWVKD 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-----KSLPCFEQEGMIWIWPGDEPPTAT 171
G++QC YHGW + GK +PS K+ KS C EQ+G I+I
Sbjct: 69 GQLQCSYHGWTFDKVGKLTGIPSEGPNQKKVGSRCAKSYECIEQDGFIFIRLEKNENLDI 128
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 216
P +P G + + + ++ ++ +N +D+ H F H F
Sbjct: 129 PPHRMPHYGEKGWQTVRLFNVFKNSVINCAENYIDVPHTVFVHDKIF 175
>gi|148252459|ref|YP_001237044.1| dioxygenase [Bradyrhizobium sp. BTAi1]
gi|146404632|gb|ABQ33138.1| putative dioxygenase [Bradyrhizobium sp. BTAi1]
Length = 452
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L D V + +V+F+ + G G + C HR
Sbjct: 14 GPSAPAGKLMRMYWQPAALVDELTGDRPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + +G+C + P S +NVK ++ P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVEGQCLETPAEPAGSALCKNVKQRAYPVVEKGGILWA 133
Query: 162 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGNGAAPAFPDLDCFTAPEAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|347527143|ref|YP_004833890.1| putative dioxygenase [Sphingobium sp. SYK-6]
gi|345135824|dbj|BAK65433.1| putative dioxygenase [Sphingobium sp. SYK-6]
Length = 446
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQ 99
++L +GP P ++ +W P AF + P E ++ FR DG G V
Sbjct: 7 RTLTQTGPETPMGRLMRQYWIP-AFLPEETPAGGAPLRLRLLGENFLAFRSPDGSLGVVD 65
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRN-VKIKSLPCFE 154
+ CAHR L G EG I+C YHGW++ G+C +MPS T ++ VKI++LP E
Sbjct: 66 HRCAHRCASLFYGRNEEGGIRCVYHGWKFDRTGQCIEMPSEPPETDYKHLVKIRALPVVE 125
Query: 155 QEGMIWIWPGD 165
+ G+ W++ GD
Sbjct: 126 RYGVAWVYMGD 136
>gi|60326839|gb|AAX18934.1| isophthalate dioxygenase oxygenase component [Comamonas
testosteroni]
Length = 424
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
++L GP L+ +W P S+++ D V E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 157
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 158 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 212
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|414174881|ref|ZP_11429285.1| hypothetical protein HMPREF9695_02931 [Afipia broomeae ATCC 49717]
gi|410888710|gb|EKS36513.1| hypothetical protein HMPREF9695_02931 [Afipia broomeae ATCC 49717]
Length = 452
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ +GP P L+ +W P A +L+ + E +V+FR + G G + C
Sbjct: 10 ITRTGPADPAGKLLRMYWQPAALVDELEGPRPIRAVKLLGENFVLFRDEHGRYGLMDRDC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
HR L G + G ++C +HGW + G C + P S +N+K ++ P E+ G
Sbjct: 70 PHRGADLAFGRLENGGLRCAFHGWLFDVQGNCLETPAEPVGSVLCKNIKQRAYPVVEKGG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
++W + G+ P A I C + P + + ++E L + +D AHA F H
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|301072746|gb|ADK56283.1| Rieske-domain protein neverland [Spodoptera littoralis]
Length = 451
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL-GSVNEG 117
N WF VA S +LK+ ++ D + I+RG+DG+ V C H L + G+V+
Sbjct: 122 NGWFAVAESRELKNGGVLSIDALGQNLCIYRGEDGVARVVDAYCPHLGANLGIAGTVSGS 181
Query: 118 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE--PPTATIP 173
I+CP+H W + +G C +P + + V IK E++G +WIW E P +P
Sbjct: 182 CIECPFHKWRFGENGACVSVPGVEHAPKGVSIKHWTTVERDGAVWIWYDAEGRDPLWIVP 241
Query: 174 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
L L G+ E V+ I+ + +N D+AH HT + G
Sbjct: 242 ELPELKSWGYRGRNEYVVSAHIQE--IPENGADVAHLNAVHTMSLLSG 287
>gi|398984223|ref|ZP_10690492.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399012013|ref|ZP_10714341.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398116619|gb|EJM06378.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398155922|gb|EJM44349.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 357
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ A S +LKD + +P V+FR D +++ C HRA PL G+V ++
Sbjct: 25 WYVAALSRELKDQPL-GRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSNGTVEARGLR 83
Query: 121 CPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLP 177
C YHG + GKC ++P K+ + P EQ+ +IWIW G E P P P
Sbjct: 84 CGYHGLLFDDGGKCIEIPGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPQ---PTFAP 140
Query: 178 PSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
P +++H+ V + L+ DNL+DL+H + H T S+
Sbjct: 141 PV-YDVHSSGKYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLHTIGGNASI 191
>gi|221066802|ref|ZP_03542907.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220711825|gb|EED67193.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 424
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
++L GP L+ +W P S+++ D V E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 157
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 158 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 212
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|238858999|dbj|BAH70269.1| oxygenase component of isophthalate dioxygenase [Comamonas sp. E6]
Length = 424
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
++L GP L+ +W P S+++ D V E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 157
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 158 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 212
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|84687812|ref|ZP_01015682.1| possible phthalate dioxygenase [Maritimibacter alkaliphilus
HTCC2654]
gi|84664184|gb|EAQ10678.1| possible phthalate dioxygenase [Rhodobacterales bacterium HTCC2654]
Length = 464
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 22 CASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT-MVPFDC 80
C + + + I+ + ++ GP P L+ +W P A S +L +VP
Sbjct: 12 CNHCAANDRQGGIMISQQLNDTITRVGPGTPAGEVLRRYWQPAALSDELAGKRPVVPVTL 71
Query: 81 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-- 138
E V+FR +G G + C HR L G + + ++CP+HGW + G+C + P
Sbjct: 72 LGEELVLFRDSEGELGLIDRHCPHRGSDLCYGRLEDNGLRCPFHGWHFDRTGQCVEQPGE 131
Query: 139 ---STQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTATIPCLLPPSGFEIHAEIVMELPI 193
S +K S P E+ G+++ + PGD PP C P + + E
Sbjct: 132 PEGSKMHEQIKTTSYPVEERNGIVFAYMGPGDPPPFPNFDCFRAPDSHVFAFKGLWECNW 191
Query: 194 EHGLLLDNLLDLAHAPFTH 212
L + +D AHA F H
Sbjct: 192 LQALEVG--IDPAHASFLH 208
>gi|94314465|ref|YP_587674.1| vanillate O-demethylase oxygenase subunit (4-hydroxy-
3-methoxybenzoate demethylase) [Cupriavidus
metallidurans CH34]
gi|93358317|gb|ABF12405.1| putative vanillate O-demethylase oxygenase subunit (4-hydroxy-
3-methoxybenzoate demethylase) [Cupriavidus
metallidurans CH34]
Length = 347
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ ++++ + D +V + V +R DG +++ C HRA PL G
Sbjct: 3 LKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQEG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
+I+C YHG ++ G+C ++P + +K++S P ++ ++WIW G +P A
Sbjct: 63 DQIRCMYHGLLFNCAGQCVEVPGQERISDKLKVRSFPTEVRDNLVWIWMG-QPELADASE 121
Query: 175 LLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+ G+ + + L++DNLLD +H F H +
Sbjct: 122 IKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHLGFVHNKSIG 169
>gi|374578640|ref|ZP_09651736.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM471]
gi|374426961|gb|EHR06494.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM471]
Length = 445
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 112/275 (40%), Gaps = 44/275 (16%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQ 99
K L SGP L+ FW PV S +L + P E + FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSEELPELDGEPKKIIVLGEELLAFRDTRGVVGLID 67
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 154
C HR L LG E I+C YHGW++ TDG+C MP++ V+IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLVRIKSYPARE 127
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 202
MIW + G +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMGPADAMPELPDL----------EMAL-LPASHRYVGKKWQDCNWVQALEGS 176
Query: 203 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 255
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHAAGL 235
Query: 256 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 288
+ G G+L G + + A L H PS+
Sbjct: 236 TIAG----GRLTGGDNIYWRIAQFLMPFHAYAPSA 266
>gi|421870166|ref|ZP_16301803.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|358070773|emb|CCE52681.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
Length = 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G ++++CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDSCAHRQVPLHAGVVSGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLAEA 147
Query: 176 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|167590452|ref|ZP_02382840.1| Rieske (2Fe-2S) domain protein [Burkholderia ubonensis Bu]
Length = 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S ++K + +P V+ R G +++ CAHR PLH G V
Sbjct: 31 DHWYPLAWSREVKRGGTLGVRFAGDPIVLVRTASGAVFALEDRCAHRQVPLHAGVVTGES 90
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
I+C YHGW Y G+C +P + +++ PC E G+I+++PGD P
Sbjct: 91 IRCCYHGWTYDCTGRCIDVPYLGRERLPNGVRAYPCREVHGLIFVFPGDAALAGERPLPE 150
Query: 177 PPSGFEIHAE---IVMELPIEHGLLLDNLLDLAH 207
PS + + E+ + + +NL+D+ H
Sbjct: 151 LPSAEDSAYKTRRFGREVKCHYSFMHENLMDMNH 184
>gi|336176153|ref|YP_004581528.1| Rieske (2Fe-2S) domain-containing protein [Frankia symbiont of
Datisca glomerata]
gi|334857133|gb|AEH07607.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia symbiont of
Datisca glomerata]
Length = 426
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRI 119
W+ + DLK +VP + W +FR K G G + + C H L G V E R+
Sbjct: 33 WYFARYGEDLKPGDVVPLELMSHQWALFRTKSGKVGIIDSLCCHAGADLARSGWVTEDRL 92
Query: 120 QCPYHGWEYSTDGKCEKM---PSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
C YH WE+ TDG+C M P+ ++ + +S+P E+ G I+ W G EP A +
Sbjct: 93 ACGYHAWEFETDGRCTSMSRVPADKIPARARQRSIPVIERAGNIYFWYGPEPVRAFVDL- 151
Query: 176 LPPSGFEIH--AEIVMELPIEHG---LLLDNLLDLAHAPFTH 212
S FE + ++ I G + ++++D H P++H
Sbjct: 152 ---SHFESDRFENVKGQIYIGRGDPERISEHIVDSYHFPYSH 190
>gi|123966007|ref|YP_001011088.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9515]
gi|123200373|gb|ABM71981.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9515]
Length = 439
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 34/304 (11%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ + S LK + + F F+EP ++FR C++N C HR + GS++ G +
Sbjct: 48 WYAICPSNVLKKNKIHYFSLFDEPLLLFRDNKNNVRCIKNICPHRGASFYGGSISNGELT 107
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRN------------VKIKSLPCFEQEGMIWIWPGD--- 165
CPYHG +S++G C+ + S R+ + + E++ I+I+ D
Sbjct: 108 CPYHGARFSSEGNCQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFIYFSDKSE 167
Query: 166 --------EPPTATIPCLLPPSGFEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHT 213
EP + L +GF I E++++ + +++N LD+ H + H
Sbjct: 168 MDLNNIKEEPSISNYE--LISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHG 225
Query: 214 STF-AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
T K + LV F + Y + I + P I PG++
Sbjct: 226 DTIPDKEVNKNVLVSFNQKININPNYIE--SIYFYKKNPTKEFIRIKYIPPGRILIYKGD 283
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDF--ASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
+ Q+ +P K R++ R F +L ++ + + ++ NED +
Sbjct: 284 PAVSRYVQVLDHIPLGENKARVIVRHYRKFLKNKLLNNLILFKENQKKIFYKIFNEDYMI 343
Query: 331 VLGQ 334
+ Q
Sbjct: 344 LKTQ 347
>gi|218438222|ref|YP_002376551.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218170950|gb|ACK69683.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 48/356 (13%)
Query: 54 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 113
T L+NFW+ + L +V EP +I R DG +++ C HR PL G
Sbjct: 2 TTLLRNFWYVAMPANKLTAGQLVGKKMLGEPILIGRKADGEVFAMRDICPHRGIPLRHGW 61
Query: 114 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 166
+ + C YHGW++ T DG C ++PS + +++ + PC E +G IW++ E
Sbjct: 62 IEGDGVCCCYHGWKFKTKDGCCSEIPSLTEYDKLDIGRIQVTTYPCREIQGHIWVYIASE 121
Query: 167 PPTATIPCLLPP---------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
P LPP + +I ++ ++ L+D AH P+ H + +
Sbjct: 122 GKRNIDPAELPPVPTVPDFGKTAPQIAETSHFACDVDQAVI--GLMDPAHGPYVHRAWWW 179
Query: 218 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR----- 272
+ VK + ++P P+ P M +S +KP KL G
Sbjct: 180 RSGPRKFRVK--------EKLYEPVPMGFRLAPYEMPVS----AKPYKLLGNKVSIEIVF 227
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMS-LD------FASVLKHVPFM---QYLWRHFAEQ 322
Q T ++ L R K LL ++ +D S+ +P++ + + R+ +
Sbjct: 228 QLPTVRQEI---LRGDRHKACLLTAITPIDENQCEVHQSIYWTIPWLGIVKPIMRYLTIE 284
Query: 323 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
LN+D +V+ QQE + ++ + + + L R+ + PF P+
Sbjct: 285 FLNQDRDVVIKQQEGLAYNPSLMLIDDADTQAKWYFSLKREYERSQQENRPFNNPV 340
>gi|398826214|ref|ZP_10584473.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
gi|398221647|gb|EJN08051.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
Length = 452
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ +GP P ++++W P A +L+ + + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGERPIRPVKLLGENLVLFRDETGRYGLIDRHC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKESKLCQNIRQRSYPVVEKSG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
++W + G+ P A + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 212 H 212
H
Sbjct: 184 H 184
>gi|294497580|ref|YP_003561280.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium QM
B1551]
gi|294347517|gb|ADE67846.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium QM B1551]
Length = 335
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 123/330 (37%), Gaps = 47/330 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L W P A+S DL D + EE V+FR + I ++ C HR L LG V +
Sbjct: 7 LAKEWLPAAYSHDLTDQPL-QVTILEERVVLFRTTNAIKA-FKDLCIHRGAALSLGKVVD 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I CPYHGW+Y G C K+P K + C E+ G+IW+ E
Sbjct: 65 DCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYACVEKYGIIWVKMNSEAGDTP 124
Query: 172 IPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 219
+P SGF+ L +++N LD++H F H +
Sbjct: 125 LPFYDEHLNSGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYAEIPDYKV 184
Query: 220 -WS----VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
W V + A G + Y RP L + + G++
Sbjct: 185 HWKDNRYVSDEIAVYADADGTGNFATIYYTFEILRPTVARLKKVNY-ETGEI-------- 235
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWRHFAEQVLNEDLRLV 331
L LP +K+ + FA V ++ F QY +R F + ++ +D +V
Sbjct: 236 ---FSMLFAVLPEEERKSTV-------FALVSRNYSFDAPDQY-FRDFQQLIIEQDTSIV 284
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLW 361
Q+ L + D+L + YR W
Sbjct: 285 ESQKPEELPLDLQAELHLNPDRLSIAYRRW 314
>gi|365863184|ref|ZP_09402907.1| putative oxygenase Rieske iron-sulfur component [Streptomyces sp.
W007]
gi|364007408|gb|EHM28425.1| putative oxygenase Rieske iron-sulfur component [Streptomyces sp.
W007]
Length = 378
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA S ++ + E +FRG+ G +++ CAHR PL +G V+
Sbjct: 4 DFWYPVAQSRSVRGGQVAAAVFAGERMALFRGRSGAVHALEDRCAHRQVPLSMGVVDGET 63
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + +++ P E G+++++PGD A P
Sbjct: 64 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRAYPVREAYGLVFVFPGDPEKAAVTPL 123
Query: 175 LLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK 218
P GF M + + +NLLD+ H F H K
Sbjct: 124 PEVP-GFASPQYRTMAFSRTVRCHYSFMHENLLDMNHQ-FLHRGVVGK 169
>gi|428201421|ref|YP_007080010.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
gi|427978853|gb|AFY76453.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
Length = 356
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA ST+++D+ + + + V++R K G +++ C HR L G V
Sbjct: 21 NHWYVVARSTEVRDEP-IGVTLWHQAIVLYRDKTGKVHALEDRCPHRQVKLSHGKVIGNE 79
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPP---TAT 171
++C YHGW ++ +G C +P + +L N KI+ P E +G IW++PGD +
Sbjct: 80 LECAYHGWRFNWEGNCVAVPYLASNQKLPNCKIRRYPVRELDGFIWLFPGDLDKLDRNSI 139
Query: 172 IPCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 229
P +P I ++E + L++NL+D+ H H + W+ L
Sbjct: 140 QPMGVPEWNHLNYIATVSIIECKGHYSFLIENLMDMYHG---HLHDDYQAWASAVLKDLN 196
Query: 230 TPASGLQGYWDP---YPID 245
+ Y++ Y ID
Sbjct: 197 IDNKRVNAYYEAQSYYKID 215
>gi|296115924|ref|ZP_06834547.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295977496|gb|EFG84251.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 354
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 131/312 (41%), Gaps = 27/312 (8%)
Query: 39 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 98
LPR N++ V +N L W+PVA DL + + P VI+R +G
Sbjct: 17 LPR---NMTFDVDDWNI-LARCWYPVALVRDLGAQPLS-MTLLDAPLVIYRAGEGDIVIA 71
Query: 99 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFE 154
+ C HR PL +G + + C YHG+ + G+C ++P S + +++ P E
Sbjct: 72 DDLCPHRGVPLSMGKGDGQTVACAYHGFRFGAQGRCVRVPAHPDSAIPSKLNLRTYPVVE 131
Query: 155 QEGMIWIW---PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
+ G+IW G+ P +P PS +I+ + ++ G ++ +D+AH F
Sbjct: 132 RYGLIWTCLRPEGEMPEIPPMPHWDDPSYQQINCPWI-DIAGFAGRQVEGFIDVAHFAFV 190
Query: 212 HTSTFA--KGWSVPSLVKFLTPASGLQGYWDP----YPIDM--EFRPPCMVLSTIGISKP 263
HT TFA + VP LTP G + + YPI + RP L + P
Sbjct: 191 HTDTFADPENPVVPPYRTRLTP-DGFEAEYRSNVGNYPIGVTDRGRPGFEWLRHFRVHVP 249
Query: 264 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 323
+ L ++ P S +KTR+ M +F K +P F +V
Sbjct: 250 FTATLEIHFPDNGRLVIMNAASPVSARKTRMFAPMCRNFD---KELPLQDVY--DFNLRV 304
Query: 324 LNEDLRLVLGQQ 335
ED LV Q+
Sbjct: 305 FEEDRALVEAQR 316
>gi|433647375|ref|YP_007292377.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
gi|433297152|gb|AGB22972.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
Length = 351
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+ W+P+A + DL D V FR D P + + C HR LHLG+V
Sbjct: 10 LRRGWYPIARAVDL--DRPRQATLLGRRLVTFRTADNRPRVLPDRCLHRGGALHLGAVIG 67
Query: 117 GRIQCPYHGWEY-STDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
I+CPYHGW + DG C +PS ++ I + P E+ G++W GD P
Sbjct: 68 DSIECPYHGWRWRGADGHCVYIPSNGPSAPIPKSAVIDAFPTVERYGLVWTCVGD--PLT 125
Query: 171 TIPCL--LPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFA 217
P L L P G A ++ +E G+L ++N D+AH PF H T
Sbjct: 126 GPPHLPELEPLGMTYAAGDPVD--VEAGILAAMENFRDVAHFPFVHRGTMG 174
>gi|240137223|ref|YP_002961692.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
gi|418060776|ref|ZP_12698672.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
gi|240007189|gb|ACS38415.1| putative rieske 2Fe-2S family protein [Methylobacterium extorquens
AM1]
gi|373565667|gb|EHP91700.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
Length = 361
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 132/346 (38%), Gaps = 41/346 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVVGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CP+HGW + TDG+C +P ++ + ++ P E G +W+ P P
Sbjct: 84 DTLICPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 227
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 228 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
P +S + P +++EFR P + L I +
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI-------------K 250
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
A + P +T L +S ++ P + L R F L +D +++
Sbjct: 251 AGAKRVANYTFATPMGPNRTMLTNALSWSMPALNLLKPIARPLMRQF----LTQDQQVLQ 306
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|148555968|ref|YP_001263550.1| phthalate 4,5-dioxygenase [Sphingomonas wittichii RW1]
gi|148501158|gb|ABQ69412.1| Phthalate 4,5-dioxygenase [Sphingomonas wittichii RW1]
Length = 431
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 42 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGCVQN 100
+ L G P L+ +W P+A + +D + P F E V++R K G+ G V
Sbjct: 8 RQLTRVGSGTPMGELLRRYWHPIAGVAEFDGEDRIRPVRLFGEDLVLYRDKSGVFGLVDR 67
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--------VKIKSLPC 152
C HR L G V + ++C YHGW + DG+C + P + N ++I S P
Sbjct: 68 RCPHRRADLAYGFVEQCGLRCNYHGWRFDADGRCLEQPYEDVANPTGRFRDKIRIASYPV 127
Query: 153 FEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFT 211
+ GM+W + G P +P P S ++V+ E+P +N +D H +
Sbjct: 128 AVKAGMVWAYMG-PAPAPLLPDWEPFSWKNGFVQVVLAEIPCNWLQCQENSIDPVHFEWM 186
Query: 212 HTS 214
H +
Sbjct: 187 HMN 189
>gi|167576860|ref|ZP_02369734.1| PrnD [Burkholderia thailandensis TXDOH]
Length = 360
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 42 KSLNVSGPVQPYN--TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 99
++L P+ Y+ TRL W+ S DLKD F P V +RG G +
Sbjct: 8 QALTKEHPLGAYDATTRLAASWYVAMRSDDLKDKP-TELTLFGRPCVAWRGATGRAVVMD 66
Query: 100 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---------RNVKIKSL 150
CAH L G V +G IQCP+H W Y G+C +P L R + +L
Sbjct: 67 RHCAHLGANLADGRVKDGCIQCPFHHWRYDEQGQCVDIPGHSLAVRRLEPVPRGARQPTL 126
Query: 151 PCFEQEGMIWIWPGDEPPTATIPCLLPP---SGFEIHAEIVMELPIEHGLLLDNLLDLAH 207
E+ G +W+W G P +P + +G +H E +++N D H
Sbjct: 127 VTAERYGYVWVWYGSPRPLHPLPDIAAADVDNGDFMHLHFAFETTTAVLRIVENFYDAQH 186
Query: 208 APFTHT---STFA----KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 260
A H S F W V+ L A G + +D F P M+ +G+
Sbjct: 187 ANPVHALPISAFELKLFDDWRQWPEVESLARAGAWFGAGIDFTVDRYFGPLGMLSRALGL 246
Query: 261 S 261
+
Sbjct: 247 N 247
>gi|119491090|ref|ZP_01623248.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119453635|gb|EAW34795.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 343
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ VA S ++K + + +P ++FR G +++ C HR L G + G
Sbjct: 15 NHWYVVARSNEVKTQPL-GVTLWNQPIILFRDSQGKIQALEDRCPHRQVKLSHGKIIAGL 73
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
I+C YHGW+++T G+C K+P + +L N +I++ P E +G IW++ G E T T P
Sbjct: 74 IECAYHGWQFNTQGQCVKIPYLAENQKLPNCQIRNYPVQELDGFIWLFLG-ENSTQTQPL 132
Query: 175 LLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
+P H + + + H +++NL+D+ H H + W+ L K
Sbjct: 133 GVPEWD---HLNYIATVSLIHCQAHYSFVIENLMDMYHG---HLHQNWQAWTDAVLEKI 185
>gi|388544262|ref|ZP_10147550.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. M47T1]
gi|388277445|gb|EIK97019.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. M47T1]
Length = 347
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 46/274 (16%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L W+PVA DL D + + P V+FR GI ++ C HR PL +G V
Sbjct: 26 LAQHWYPVARVQDLTDKPLAAM-LLDVPLVLFRTSAGI-TIARDICPHRGVPLSMGWVEH 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWI-WPGDEPPTA 170
I CPYHG Y DG+C K+P+ T++ +K+ E+ G++W EP
Sbjct: 84 DEIVCPYHGLHYGADGRCSKIPAQPDLTRISPRFTLKTFAAVERFGLVWTSLHSLEPDLP 143
Query: 171 TIPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSL 225
+P P H I+ +++ G L+ +D+AH + H FA + VPS
Sbjct: 144 QLPTWDDPD----HQAILPPWVDIAGSSGRQLEGFIDVAHFAWVHHEAFADRDNPVVPSY 199
Query: 226 VKFLTPASGLQGYW---DPYPIDME------FR--------PPCMVLSTIGISKPGKLEG 268
LT YW YP ++ FR PP + T+ G+L
Sbjct: 200 DTQLTDYGLRTEYWSGVSNYPKALQHLEPEGFRWLRVFDVYPPFSAVLTVHFPDDGRL-- 257
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
C L+ P S +KTRL ++ +F
Sbjct: 258 -----CI-----LNAACPMSARKTRLFVPLTRNF 281
>gi|443317166|ref|ZP_21046585.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783241|gb|ELR93162.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 351
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+N W+ S DLK M EP ++ R + G +++ C HRA PL G +
Sbjct: 10 LRNIWYHALPSRDLKPGQMRSKTLLNEPILLGRTQRGQAFALRDICPHRAVPLSCGRFDG 69
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD----- 165
++C YHGW + +G C ++PS L ++ E +G +WI+ D
Sbjct: 70 ESVECCYHGWRFGPNGSCLQIPSLMADQTLDLSKFDVRRYDVQEVQGNVWIYMADPNPQQ 129
Query: 166 -EPPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
PP +P +P + +I +P ++H ++ L+D AH+PF H + + +G
Sbjct: 130 VHPPRFEVP-RIPGFPEDAQPQISYTMPFSCFVDHAVV--GLMDPAHSPFVHRAWWWRGG 186
Query: 221 SVPSLVKFLTPA 232
++ +K+ P+
Sbjct: 187 NLNPEIKWFDPS 198
>gi|75906758|ref|YP_321054.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75700483|gb|ABA20159.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 460
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 36/341 (10%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRA 106
G P++ W+PV + DL F + VI+ + ++ C HR
Sbjct: 14 GGSDPHSFDWHEAWYPVHYLEDLDKSKPTAFTLLGKDIVIWWDQQSQTWQAFEDQCPHRL 73
Query: 107 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 158
PL G +NE G ++CPYHGW ++ DG C+++P + + + S E++GM
Sbjct: 74 APLSEGRINEEGLLECPYHGWSFAGDGSCQRIPQQPEGGQAETSQRACVTSWLTTERQGM 133
Query: 159 IWIWPGDEPPTA--TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
++++ G+ A IP + P P G+ I ++P + LL+N+LD +H +TH
Sbjct: 134 LFVYIGNPENAAKTKIPVVEPLEESPDGWVI-INTFRDVPYDALTLLENILDPSHLAYTH 192
Query: 213 TSTFA--KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 270
T K + L ++ G +G W + LST ++ N
Sbjct: 193 HKTVGNRKNAAPLELEVVVSGKHGFKGVW-----HQSIKAGQSELSTTFVAPALMWHDIN 247
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY---LWRHFAEQVLNED 327
+ + + + P + + RL R F S L + F++ + H + + ED
Sbjct: 248 SER--GRILTVVYATPIRKGECRLFARFPFKFPSKLPGI-FIKLRPRWYYHLGQNGVLED 304
Query: 328 LRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 361
++ L QER N + LP D R W
Sbjct: 305 DQIFLHYQERYLQAKGGSPNFTKAFYLPTKADSFVFELRQW 345
>gi|221065631|ref|ZP_03541736.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220710654|gb|EED66022.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 324
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ W PVA S+D+ PF E+P V++R +G+ + C HR L +G V
Sbjct: 4 RTLWHPVAQSSDV---VSAPFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVE 60
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
G ++CPYHGW++S+ G+C K+P+ T + ++++ E G+IW+ EP +
Sbjct: 61 NGHLECPYHGWQFSSGGQCVKVPAVPDFTPPASQRVQAFEVQEAYGLIWV--RLEPSDSQ 118
Query: 172 IPCLLPPSGFEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
+P + + H V ++ +++N LD++H F H +GW
Sbjct: 119 LPVFAAET--DQHLRKVNCGSYDVAASAPRIIENFLDMSHFGFVH-----EGW 164
>gi|254559235|ref|YP_003066330.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
gi|254266513|emb|CAX22277.1| putative rieske 2Fe-2S family protein [Methylobacterium extorquens
DM4]
Length = 361
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 41/346 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVAGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CP+HGW + TDG+C +P ++ + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 227
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 228 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
P +S + P +++EFR P + L I K G T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI---KAG------TK 254
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|251797010|ref|YP_003011741.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus sp. JDR-2]
gi|247544636|gb|ACT01655.1| Rieske (2Fe-2S) domain protein [Paenibacillus sp. JDR-2]
Length = 325
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 25/170 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L++ W PVA + D+ D T E VIFR K G+ +++ C HR PL LG V+
Sbjct: 8 LEHEWHPVAIAADVSD-TPKQVIVLGEKVVIFRTKQGVKA-MKDLCIHRGVPLSLGRVDN 65
Query: 117 GRIQCPYHGWEYSTDGKCE---KMPSTQLRNVKIKSLP--CFEQEGMIWIWPGDEPPTAT 171
I C YHGW Y DG+C MP +Q +K K+ C E+ G +W+ G EP
Sbjct: 66 DEIVCAYHGWRYDGDGRCVCIPAMPKSQAIPLKAKTQTYLCLERYGFVWVCLG-EPKEE- 123
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTH 212
PP ++ E+ LPI G +++N LD++H F H
Sbjct: 124 ----YPPLEGKVEEEL---LPIWMGPYPVQASAPRVIENFLDVSHLMFVH 166
>gi|456352367|dbj|BAM86812.1| putative dioxygenase [Agromonas oligotrophica S58]
Length = 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A + +L + V + +V+F+ + G G + C HR
Sbjct: 14 GPTAPAGKLMRMYWQPAALADELVGERPVRAVKLLGQHFVLFKDEQGRYGLLDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + +G ++C +HGW + +G+C + P S +N++ +S P E+ G++W
Sbjct: 74 ADLAFGRLEQGGLRCSFHGWLFDVEGQCLETPAEPPGSPLCKNIRQRSYPVVEKGGILWA 133
Query: 162 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
W GD P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGDGAAPAFPDLDCFTAPDTYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|328545346|ref|YP_004305455.1| Ring-hydroxylating dioxygenase, large terminal subunit [Polymorphum
gilvum SL003B-26A1]
gi|326415088|gb|ADZ72151.1| Ring-hydroxylating dioxygenase, large terminal subunit [Polymorphum
gilvum SL003B-26A1]
Length = 353
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 32/306 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L+ W+ ++K M E +I R + G +++ C HR PL G +
Sbjct: 9 LRGLWYVACPGAEIKAGAMTGRKLMGELVLIGRDRHGKVFALRDICPHRGIPLRHGWFDG 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIW---PGDEP 167
+QC YHGW++ TDG C +PST + + P EQ+G+IWI+ G++P
Sbjct: 69 EHVQCCYHGWKFDTDGACVDIPSTHEYQTIDYSKITCGAYPAVEQQGLIWIYFAEKGEKP 128
Query: 168 PTATIPC--LLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK--G 219
P LLP + + + P ++H L L+D HA F HTS + K G
Sbjct: 129 EDGRQPAPPLLPDFAADQGPSVAIMQPFVCSVDHAAL--GLMDPTHAAFVHTSWWFKKNG 186
Query: 220 WSVPSLVKFLTPA----SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG-KLEG-QNTRQ 273
+ K P+ + ++ P I + V + I PG ++E + R
Sbjct: 187 AKLRPKEKVFEPSELGWAMVRHKIPPQNIAYRYLLGDNVTTEISYRLPGLRIEHIKGDRH 246
Query: 274 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 333
C L + + + R L+ ++ + P ++YL F L++D R+V+
Sbjct: 247 CVVGLTTI-TPVTEDETEVRQLFWSTIGWLKPFN--PLVRYLMNVF----LDQDRRVVIQ 299
Query: 334 QQERMN 339
Q+E +
Sbjct: 300 QREGLE 305
>gi|383642875|ref|ZP_09955281.1| oxygenase Rieske iron-sulfur component [Streptomyces chartreusis
NRRL 12338]
Length = 388
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+PVA S ++ + ++ E +FRGK G +++ CAHR PL +G V
Sbjct: 35 DHWYPVALSRRVRAERVLATTFAGERIALFRGKSGDVHALEDRCAHRQVPLSMGVVEGET 94
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + ++ P E G+++++PGD A P
Sbjct: 95 LRCRYHAWAYRGDGRISQIPYLAKGDRRPPRGVRGYPVREAYGLVFVFPGDPQRAAATPL 154
Query: 175 -LLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAK 218
LP G + + + + + +NLLD+ H F H +
Sbjct: 155 PHLPAFGSPRYRTMTYSRTVRCHYSFMHENLLDMNHQ-FLHRGVVGR 200
>gi|374711187|ref|ZP_09715621.1| Rieske (2Fe-2S) domain-containing protein [Sporolactobacillus
inulinus CASD]
Length = 346
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 56/309 (18%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N+W+PVA S + D + + V++R K G ++ C HR PL +G V +
Sbjct: 26 LINYWYPVAESAQVSDQPLA-VTLLDVALVVYRAK-GKAVVARDLCIHRGTPLSMGWVED 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDE----PP 168
I CPYHG+ YS DG+C +P+ + + P E+ G++W E PP
Sbjct: 84 DNIVCPYHGFSYSADGQCVSIPAHPEAKISPRLCLTVYPVVERYGLVWTTLAGESDHVPP 143
Query: 169 TATIPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVP 223
P G E ++ + +++ G ++ +D+AH + HT+TFA VP
Sbjct: 144 -------FPIWGNEDYSSFLAPTIDINGSAGRQIEGFVDVAHFAWVHTATFADRNNAFVP 196
Query: 224 SL----------VKFLTPASGL-QGYWDPYPI------DMEFRPPCMVLSTIGISKPGKL 266
S +L+ S +G DP P + + PP + + + + P
Sbjct: 197 SYKVSRTPQGIHTDYLSTVSNYPKGMADPSPAAFKWLREYDIYPP--LCARLIVHFP--- 251
Query: 267 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 326
EG+ L L+ P S +KTRL ++ +F L F ++ NE
Sbjct: 252 EGK-------QLWILNAASPISARKTRLFCPIAQNFDKTLSVEDACA-----FNLKIFNE 299
Query: 327 DLRLVLGQQ 335
D +V Q+
Sbjct: 300 DREMVENQK 308
>gi|290958800|ref|YP_003489982.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260648326|emb|CBG71437.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 406
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRI 119
W+ V S +L+ +V F + FRG DG C H L +G V +G +
Sbjct: 35 WYAVLRSGELRAGRVVSLHYFGRALIAFRGSDGRAAVRDAHCPHYGAHLGVGGKVVDGAV 94
Query: 120 QCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 178
QCP+HGW + TDG+C + P +T+ V I P E G+++++ G P +P +
Sbjct: 95 QCPFHGWRFGTDGRCVEAPFATRTPKVSIGGFPVREHSGLVFVYAGPGEPAWEVPEIEET 154
Query: 179 SGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTST 215
+ + I V I + +N++D +H F H +
Sbjct: 155 GSLDFASPIDDVCRARIHIQEMRENIVDESHFHFIHGQS 193
>gi|295702951|ref|YP_003596026.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium DSM
319]
gi|294800610|gb|ADF37676.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium DSM 319]
Length = 335
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 120/330 (36%), Gaps = 47/330 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L W P A+S D+ D + EE V+FR + I ++ C HR L LG V +
Sbjct: 7 LAKEWLPAAYSHDVTDQPL-QVTILEERVVLFRTTNAIKA-FKDLCIHRGAALSLGKVVD 64
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
I CPYHGW+Y G C K+P K + C E+ G+IW+ E
Sbjct: 65 DCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMNSEAGDTP 124
Query: 172 IPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 219
+P SGF+ L +++N LD++H F H +
Sbjct: 125 LPLYDEHLNSGFKTVCASPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYAEIPDYKV 184
Query: 220 -WS----VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 274
W V + A G + Y RP L + +
Sbjct: 185 HWKDNRYVSDEIAVYADADGTGNFATIYYTFEILRPTVARLKKV------------NHET 232
Query: 275 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWRHFAEQVLNEDLRLV 331
L LP +K+ + FA V ++ F QY +R F + ++ +D +V
Sbjct: 233 GEIFSMLFAVLPEEERKSTV-------FALVSRNYSFDAPDQY-FRDFQQLIIEQDTSIV 284
Query: 332 LGQQERMNNGANVWNLPVGYDKLGVRYRLW 361
Q+ L + D+L + YR W
Sbjct: 285 ESQKPEELPLDLQAELHLNPDRLSIAYRRW 314
>gi|295700277|ref|YP_003608170.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439490|gb|ADG18659.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 417
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQNT 101
L G P ++ FW P S+++++ P E V FR DG G ++
Sbjct: 10 LTQVGKGTPNGDMIRQFWIPALLSSEIQEPGGAPKRVRLLGEDLVAFRDSDGKVGLLEEQ 69
Query: 102 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQE 156
C HR L LG +EG ++C YHGW+++ DG+C P S +K + P E
Sbjct: 70 CPHRRASLALGDNSEGGLRCLYHGWKFAVDGQCMDTPTEPEDSKLCSRIKAVAYPVREVA 129
Query: 157 GMIWIWPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
G+IW + GD P L ++ A V+E + ++ +D AHA H
Sbjct: 130 GVIWTYMGDPAKVPQFPDFDFLSYPAEKVAAFKVLE-DCNYAQAVEGTIDSAHAGVLHRE 188
Query: 215 TFAKGWSVPS 224
+ WS P+
Sbjct: 189 ---QPWSAPA 195
>gi|295700594|ref|YP_003608487.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439807|gb|ADG18976.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 396
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 42 DYWYPLAWSHEVKRGKTLGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 101
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
I+C YHGW Y G C +P + ++S PC E EG+++++PGD A +
Sbjct: 102 IRCGYHGWTYDCSGTCIDVPYLGRERLPNGVRSYPCQEVEGLVFVFPGD----AALAEER 157
Query: 177 PPSGFEIHAEIVME-------LPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P GF ++ + + + + +NL+D+ H F H +
Sbjct: 158 PLPGFRSVSDPKYKTRRFGRPVKCHYSFMHENLMDMNHQ-FLHRRQMGQ 205
>gi|398998322|ref|ZP_10701100.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398120749|gb|EJM10402.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 358
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A +LKD V +P V+FR +G +++ C HRA PL G++ E
Sbjct: 24 NQWYVAALGWELKDKP-VGRTLLNKPVVLFRKANGEVAALEDRCCHRALPLSNGTLEESG 82
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD--------EPP 168
I+C YHG + GKC ++P K+ + EQ+ ++WIW G EPP
Sbjct: 83 IRCGYHGLLFDERGKCVEIPGQDKIPSKAKVPAYHVSEQDQIVWIWFGSEAQPEPDCEPP 142
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 222
T + SG + V + L+ DNL+DL+H + H T S+
Sbjct: 143 TYPVHS----SGKYLFEGNVYHYNAPYQLIHDNLMDLSHLGYVHLRTIGGNASI 192
>gi|291445392|ref|ZP_06584782.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
gi|291348339|gb|EFE75243.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
Length = 374
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA S ++ + + E ++R K G +++ CAHR PL +G V+
Sbjct: 46 DFWYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMGVVDGET 105
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + +++ P E G+++++PGD P A +
Sbjct: 106 LRCCYHAWAYRGDGRISQIPYLAKGDARPPRGVRAYPVREAYGLVFVFPGD-PEKAEVTP 164
Query: 175 L--LPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAK 218
L +P + + + + L +NLLD+ H F H K
Sbjct: 165 LPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVVGK 211
>gi|421852528|ref|ZP_16285215.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479205|dbj|GAB30418.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 338
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 134/305 (43%), Gaps = 45/305 (14%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L ++W P+A +L+D + + P VI+R + I + C HR PL +G N
Sbjct: 15 LASYWHPIALVRELEDKPL-GVTLLDAPLVIYRAGEEI-VVADDLCPHRGVPLSMGKGNG 72
Query: 117 GRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIW--IWPGDEPPTA 170
+ C YHG+++ G+C ++P S + +++ P E+ G+IW + P D
Sbjct: 73 QTVACAYHGFQFGHQGQCVRIPAHPDSAIPSRLNLRTYPVVERYGLIWTCLRPQDN-EDI 131
Query: 171 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 226
+IP + +GF+ +++ G ++ +D+AH F HT TFA VP+ +
Sbjct: 132 SIPSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYM 191
Query: 227 KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH--------- 277
+T PY + E+R IG S+ G+ + + R H
Sbjct: 192 PKMT----------PYGFEAEYRSNVGNYP-IGQSERGRPDFEWLRHFRVHVPFTATLEI 240
Query: 278 -------LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
L ++ P S KKTR+ M +F + L +Q ++ F ++V ED L
Sbjct: 241 HFPDNGRLVIMNAASPVSAKKTRMFAPMCRNFDTDLP----LQDVY-DFNQKVFEEDRAL 295
Query: 331 VLGQQ 335
V Q+
Sbjct: 296 VEAQK 300
>gi|316932512|ref|YP_004107494.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
gi|315600226|gb|ADU42761.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
Length = 452
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L+ + + P E V+F+ ++G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDENGRYGLIDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DG C P+ + +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGNCTDTPAEPVGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 162 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFVAPDSHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|170750020|ref|YP_001756280.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
radiotolerans JCM 2831]
gi|170656542|gb|ACB25597.1| Rieske (2Fe-2S) domain protein [Methylobacterium radiotolerans JCM
2831]
Length = 377
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 25 PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD----DTMVPFDC 80
P +++ +L+ PR + + L N W+ V S L +
Sbjct: 5 PRSARTALNAPFANPPRPADEAALDPDAMRQPLGNAWYCVGQSRSLGRAGGRSALRAVAL 64
Query: 81 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-- 138
E V+ R DG P +++ C HR L G + + CP+HGW + TDG+C +P
Sbjct: 65 NGEQIVLGRAPDGTPFALRDRCPHRGMALSKGRFDGDTLMCPFHGWRFGTDGRCRDVPTL 124
Query: 139 ----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE 194
+ ++++ P E G +W+ P P +P +P FE +V+EL +E
Sbjct: 125 SEHDAADFSRIQVQRFPVRESAGFLWVNPHLGPAAGAVPE-VPALDFEPAGFLVVELEVE 183
Query: 195 HGLLLD--NLLDLAHAPFTHTS 214
L +L+D H F H S
Sbjct: 184 ASFDLTTLSLVDPGHVAFVHDS 205
>gi|443629483|ref|ZP_21113809.1| putative Rieske (2Fe-2S) iron-sulfur domain protein [Streptomyces
viridochromogenes Tue57]
gi|443336999|gb|ELS51315.1| putative Rieske (2Fe-2S) iron-sulfur domain protein [Streptomyces
viridochromogenes Tue57]
Length = 385
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+PVA ST ++ ++ E ++RG+ G V++ CAHR PL +G V
Sbjct: 12 DHWYPVALSTSVRTKRVLATAFAGERIALYRGEGGAVYAVEDRCAHRQVPLSMGIVEGET 71
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + ++ P E G+++++PGD A I
Sbjct: 72 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRGFPVREAYGLVFVFPGDPEKAALIRL 131
Query: 175 -LLPPSGFEIHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 231
LP G + + + + + +NLLD+ H F H G P L+++
Sbjct: 132 PELPAYGSPRYRTMTFSRTVHCHYSFMHENLLDMNHQ-FLHRGIV--GRLRPELLEYRAG 188
Query: 232 ASGLQGYW 239
A ++ +
Sbjct: 189 ARSVEARY 196
>gi|429770138|ref|ZP_19302217.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
gi|429185400|gb|EKY26380.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
Length = 371
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 35/181 (19%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 114
+ + W+ VA + D+ ++ ++ EP +I R + G +++ C HRA PL G +
Sbjct: 27 ITDAWYFVALARDVPVASLKRYEIMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVE 86
Query: 115 --NEGR-IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIW--- 162
EG I+CPYHGW + DG C +PS + +K++S P E +GM+++W
Sbjct: 87 KPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRSYPVRESQGMVFVWMAA 146
Query: 163 -------PGDEPP----TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
P EPP P L+ F+ H I+H ++ L+D AH P+
Sbjct: 147 DARNPSEPDQEPPQFPGAVGQPRLVEWMDFDSH--------IDHAVV--GLMDPAHGPYV 196
Query: 212 H 212
H
Sbjct: 197 H 197
>gi|418528828|ref|ZP_13094770.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
gi|371454089|gb|EHN67099.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
Length = 324
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 58 KNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ W PVA S+D+ PF E+P V++R +G+ + C HR L +G V
Sbjct: 4 RTLWHPVAQSSDV---VSAPFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVE 60
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 171
G ++CPYHGW++S+ G+C K+P+ T + ++++ E G+IW+ EP +
Sbjct: 61 NGHLECPYHGWQFSSGGQCVKVPAVPDFTPPASQRVQAFEVQEAYGLIWV--RLEPSDSQ 118
Query: 172 IPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHTSTFAKGW 220
+P + + H V P + +++N LD++H F H +GW
Sbjct: 119 LPVFAAET--DEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVH-----EGW 164
>gi|288961232|ref|YP_003451571.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288913540|dbj|BAI75027.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 384
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 33/309 (10%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N W+ A+ +L+ + ++P + V++R D +++ C HR PL G +
Sbjct: 40 NAWYAAAYDVELRRE-LLPRTICGKKLVLYRRSDDSVTALEDACWHRLLPLSKGRLEGDN 98
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 176
+ C YHG ++ +G+C MPS + N ++ P E+ W+W GD P P +
Sbjct: 99 LVCGYHGLVFNPEGRCVGMPSQETINPSACVRRYPVVERHRFAWVWMGD--PALADPAKI 156
Query: 177 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSL 225
P + ++ + ++ L+LDNL+DL H F H+S+ +
Sbjct: 157 PDMHWNHDPAWAGDGRLIRVKCDYRLVLDNLMDLTHETFVHSSSIGNRAVAEAPFETTHN 216
Query: 226 VKFLTPASGLQG-----YW-----DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNT 271
+F+T ++ +W P +D + F PC + +G++ G +
Sbjct: 217 DRFVTVTRWMRDIEAPPFWAKQLGKPGNVDRWQIIRFEAPCTITIDVGVAPTGTGAPEGD 276
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
R + L+ P + K + ++ L L R ++ ED ++
Sbjct: 277 RSQGVNGFVLNTITPETEKTCHYFWAFCRNYK--LGEQRLTAEL-RDGVTRIFGEDEIIL 333
Query: 332 LGQQERMNN 340
QQ+ +++
Sbjct: 334 EAQQQAIDD 342
>gi|170743866|ref|YP_001772521.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
4-46]
gi|168198140|gb|ACA20087.1| Rieske (2Fe-2S) domain protein [Methylobacterium sp. 4-46]
Length = 354
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P L + W+ V S ++ + EE V+ R G +++ C HR L
Sbjct: 15 PIRRPLDDVWYCVGESRRFREGRLCAVTLGEEAIVVGRAAGGGLFALRDRCPHRGMALSA 74
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD 165
G + EGR+ CP+HGWE+ DG+C +P+ + R V++ E G++WI G+
Sbjct: 75 GRLVEGRLVCPFHGWEFRPDGQCAAIPALAARDESDFRTVRLPRFSVREASGLVWIAAGE 134
Query: 166 EPPTA-TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
P A IP + P +G + +E+ L+ + +D AH + H
Sbjct: 135 PRPDAPPIPEVEFPYAGMLVE---TLEVEASFDLVALSFVDPAHVAYVH 180
>gi|146343428|ref|YP_001208476.1| dioxygenase phtalate dioxygenase oxygenase subunit [Bradyrhizobium
sp. ORS 278]
gi|146196234|emb|CAL80261.1| putative dioxygenase; putative phtalate dioxygenase oxygenase
subunit [Bradyrhizobium sp. ORS 278]
Length = 452
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L + V + +V+F+ + G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DG C + P S +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVDGACLETPAEPAGSPLCKNVKQRSYPVVEKGGILWA 133
Query: 162 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAAPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|349688384|ref|ZP_08899526.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 350
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 127/306 (41%), Gaps = 44/306 (14%)
Query: 55 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 114
T L W+PVA +L D + + P V++R DGI + C HR PL +G
Sbjct: 26 TILARCWYPVALVRELGDQPLG-VTLLDAPLVVYRAGDGI-VIADDLCPHRGVPLSMGKG 83
Query: 115 NEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIW---PGDEP 167
+ + C YHG+ + GKC ++P S + +++ P E+ G+IW GD P
Sbjct: 84 DGQTVACAYHGFRFGGQGKCVRVPAHPDSAIPSKLNLRTYPAVERYGLIWTCLRPEGDTP 143
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
+P P +I+ + ++ G ++ +D+AH F HT TFA + VP
Sbjct: 144 AIPPMPHWDDPDYQQINCPWI-DIAGFAGRQVEGFIDVAHFAFVHTDTFADPENPVVPPY 202
Query: 226 VKFLTPASGLQGYWDP----YPID------------MEFRPPCMVLSTIGISKPGKLEGQ 269
+TP G + + YPI FR ++T+ I P
Sbjct: 203 KTRITP-DGFEAEYRSSVGNYPIGKSDRGRPGFEWLRHFRVHVPFVATLEIHFP-----D 256
Query: 270 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 329
N R L ++ P S ++TR+ M +F K +P F +V ED
Sbjct: 257 NGR-----LVIMNAASPVSARQTRMFAPMCRNFD---KDLPLQDVY--DFNLKVFEEDRA 306
Query: 330 LVLGQQ 335
LV Q+
Sbjct: 307 LVEAQK 312
>gi|440684302|ref|YP_007159097.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
gi|428681421|gb|AFZ60187.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
Length = 354
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ S LK MV EP ++ R +DG V++ C HRA PL G N ++
Sbjct: 13 WYYALPSYLLKPGKMVARIFLGEPVLLIRSQDGQVSAVRDICPHRAVPLSCGRFNGQEVE 72
Query: 121 CPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTA 170
C YHGW + G C +PS T L ++S P E +G IWI+ D +P +
Sbjct: 73 CCYHGWRFDPAGHCVSIPSLLPEQDTDLSRFDVQSYPIHETQGNIWIYMTDGDKSQPSAS 132
Query: 171 TIPCLLPPSGFEIHAEI--VMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 226
+ + P E ++ VM P I+H + L+D AH+P+ H + + + V
Sbjct: 133 EMDVPVVPGFAEQLPQLVEVMRFPCFIDHA--VTGLMDPAHSPYVHRVWWWRSGELHEEV 190
Query: 227 KFLTPA 232
K P+
Sbjct: 191 KQFDPS 196
>gi|27376181|ref|NP_767710.1| dioxygenase [Bradyrhizobium japonicum USDA 110]
gi|27349320|dbj|BAC46335.1| bll1070 [Bradyrhizobium japonicum USDA 110]
Length = 452
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ +GP P ++++W P A +L+ + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPTALVDELEGARPIRPVRLLGENLVLFRDERGRYGLIDRHC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
++W + G+ P A I C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPDTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 212 H 212
H
Sbjct: 184 H 184
>gi|384214814|ref|YP_005605978.1| hypothetical protein BJ6T_10980 [Bradyrhizobium japonicum USDA 6]
gi|354953711|dbj|BAL06390.1| hypothetical protein BJ6T_10980 [Bradyrhizobium japonicum USDA 6]
Length = 452
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ +GP P ++++W P A +L+ + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGARPIRPVKLLGENLVLFRDESGRYGLIDRHC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
++W + G+ P A + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 212 H 212
H
Sbjct: 184 H 184
>gi|197295557|ref|YP_002154098.1| putative oxidoredutase [Burkholderia cenocepacia J2315]
gi|444360500|ref|ZP_21161724.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444366598|ref|ZP_21166625.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|195945036|emb|CAR57661.1| putative oxidoredutase [Burkholderia cenocepacia J2315]
gi|443599939|gb|ELT68178.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|443604315|gb|ELT72259.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 371
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLAEA 147
Query: 176 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|359478456|ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 144/362 (39%), Gaps = 73/362 (20%)
Query: 61 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
W+PV DL D +V +D E W +F + C HR PL
Sbjct: 82 WYPVMPVCDLDKRIPHAKKVIGLDVVVWWDRNENAWKVF----------DDMCPHRLAPL 131
Query: 110 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 160
G +++ GR+QC YHGW ++ G C+ +P + + P Q ++W
Sbjct: 132 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPSTVQNDIVW 191
Query: 161 IWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
WP +P IP L PS + E+P + +L++NL+D AH P+
Sbjct: 192 FWPNTDPQYKDILMKNKPPYIPELDDPSYTRLMGN--REIPYGYEVLIENLMDPAHVPYA 249
Query: 212 HTSTFAKGWSVPSLVKFLTP----------------ASGLQGYWDPYPIDMEFRPPCM-- 253
H +VPS K + SG G + +F PPC+
Sbjct: 250 HYGIM----TVPSQKKRVKADREGGRPLEMKIQKLDRSGFIGKQEGG--TSKFIPPCVFY 303
Query: 254 VLSTIGISKPGKLEG--QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 311
V S + I K + ++ + + +C+P S +RL++ +F + V
Sbjct: 304 VSSDLFIDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDRV-V 362
Query: 312 MQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLWRDALE 366
++++ +L+ DL L+ + +++ M+ G + W +P D V +R W +
Sbjct: 363 PRWMFHVGQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTKSDACVVGFRKWLNKYA 422
Query: 367 KG 368
G
Sbjct: 423 GG 424
>gi|239988406|ref|ZP_04709070.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
roseosporus NRRL 11379]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA S ++ + + E ++R K G +++ CAHR PL +G V+
Sbjct: 35 DFWYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMGVVDGET 94
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + +++ P E G+++++PGD P A +
Sbjct: 95 LRCCYHAWAYRGDGRISQIPYLAKGDARPPRGVRAYPVREAYGLVFVFPGD-PEKAEVTP 153
Query: 175 L--LPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAK 218
L +P + + + + L +NLLD+ H F H K
Sbjct: 154 LPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVVGK 200
>gi|338534630|ref|YP_004667964.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337260726|gb|AEI66886.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 332
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 102/264 (38%), Gaps = 24/264 (9%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P+ + W+ VA S L + + V++R G C C HR L L
Sbjct: 9 PHGEQWAAHWYAVARSPALGRERPLGLQRLGRRLVLWRDAAGEAHCADAACPHRGADLGL 68
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDE 166
G V EG ++CPYHG+ Y G C MP + R + ++ P E G IW W G +
Sbjct: 69 GRVREGALECPYHGFRYEGGGACLAMPCEGRDAKPSRALALRVHPVREAHGFIWAWLGGQ 128
Query: 167 -----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
PP + P+ E V +++ ++DL H PF H G++
Sbjct: 129 ARAPLPPLPWLAGAPEPAANSASVEEVWGARFTR--VMEGMMDLHHFPFAHRRYVPPGYT 186
Query: 222 V--PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS-TIGISKPGKLEGQNTRQCATHL 278
P V+ A G+ + E RPP I + PG L + T + L
Sbjct: 187 RLDPYEVQVEEGAIRTVGW-----LRKEERPPGTGFRFDIHVGYPGVLHLRFTPR----L 237
Query: 279 HQLHVCLPSSRKKTRLLYRMSLDF 302
VC P + T + R D+
Sbjct: 238 EAAVVCTPVDAEHTWIAARFHQDY 261
>gi|163745312|ref|ZP_02152672.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382130|gb|EDQ06539.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
Length = 346
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ A+ ++ + + E +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVTRE-LQQITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG + G+C P T N K+ + P E+ G++WIW G+ P
Sbjct: 62 DTVECGYHGLTFDCAGQCVWAPGTGRIPSNAKVHAYPLHEKYGLVWIWMGN-------PA 114
Query: 175 LLPPSG-FE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
L PS FE I+ MEL + L+ DNLLD H + H S+FA +
Sbjct: 115 LADPSDIFEIENYDNPDWGINRGEAMELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKD 174
Query: 224 SLVKFLTPASGL 235
+ ++ G+
Sbjct: 175 TPLRITKTEEGI 186
>gi|78059781|ref|YP_366356.1| dioxygenase, iron-sulfur subunit [Burkholderia sp. 383]
gi|77964331|gb|ABB05712.1| Dioxygenase, iron-sulfur subunit [Burkholderia sp. 383]
Length = 371
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 7/166 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVHFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD T P
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGDATLADTRPFP 151
Query: 176 LPPSGFEIHAE---IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
S + + E+ + + +NL+D+ H F H +
Sbjct: 152 ALESADDRAYKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|33603264|ref|NP_890824.1| iron-sulfur protein [Bordetella bronchiseptica RB50]
gi|412341407|ref|YP_006970162.1| iron-sulfur protein [Bordetella bronchiseptica 253]
gi|427816274|ref|ZP_18983338.1| iron-sulphur protein [Bordetella bronchiseptica 1289]
gi|33577388|emb|CAE34653.1| iron-sulphur protein [Bordetella bronchiseptica RB50]
gi|408771241|emb|CCJ56041.1| iron-sulphur protein [Bordetella bronchiseptica 253]
gi|410567274|emb|CCN24845.1| iron-sulphur protein [Bordetella bronchiseptica 1289]
Length = 453
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGEDLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLR-NVKIKSLPCFEQEGMIWIWPGDE 166
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 218
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 219 GWSVPSLVKFLTPASGL 235
W + F+ +G+
Sbjct: 210 AWGELPEMDFVPTPTGM 226
>gi|114321506|ref|YP_743189.1| Rieske (2Fe-2S) domain-containing protein [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227900|gb|ABI57699.1| Rieske (2Fe-2S) domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 410
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 16/188 (8%)
Query: 41 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 100
+++L GP L+ +W+P+A S +++ + E V+FR G G +
Sbjct: 6 QETLTRIGPGTTMGELLRRYWWPLAASVEVRPGRALARRLLGEDLVLFRTPAGGLGLIDE 65
Query: 101 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFE 154
C HR L G V+E I CPYHGW++ G C MP+ LR + P E
Sbjct: 66 HCTHRGASLRCGHVDEEGIACPYHGWKFDHHGHCLAMPAEPRQKPALLRRAATRGFPVQE 125
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAP 209
G+++ + G +P LLP + + V ELP +++N +D AH
Sbjct: 126 LGGLVFAYIGPDPAP-----LLPRYDLLLQDDALRDIGVAELPCNWLQIMENSVDPAHVE 180
Query: 210 FTHTSTFA 217
+ H A
Sbjct: 181 WLHGHHLA 188
>gi|330993355|ref|ZP_08317290.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329759385|gb|EGG75894.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 388
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 29 KQSLDIVKGKLPRKSLNVSGPVQPYNTRL----KNFWFPVAFSTDLKDDTMVPFDCFEEP 84
KQS + + L S+ S PV + R +FW+PVA+S +LK + +P
Sbjct: 10 KQSRETMDQSLSPDSMQSSAPVTGRDLRRIRANPDFWYPVAWSRELKPGKTIGTRYAGQP 69
Query: 85 WVIFRGKDGIPGCV---QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP--- 138
+ R +G G V ++ CAHR PL G+V +QC YHGW Y G+C +P
Sbjct: 70 IALVRPLEG--GSVFALEDRCAHRQVPLSKGTVKGDSVQCCYHGWAYGRSGRCIDVPYLG 127
Query: 139 STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
+L N +++ P E +G+I+++PGD T P
Sbjct: 128 KGKLPN-GVRTYPVREVDGLIFVFPGDAAKAETTP 161
>gi|428769301|ref|YP_007161091.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683580|gb|AFZ53047.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium aponinum
PCC 10605]
Length = 340
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
+ ++FW+ VA S LK + ++ E IFR K+G P +Q+ C HR L G V
Sbjct: 2 KFEDFWYVVALSKQLKSNQVLSRQVLGEWLAIFRTKNGKPVALQDRCTHRNSRLSCGKVQ 61
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+G +QCPYHGW Y G +PS ++K K EQ+G I++ +E
Sbjct: 62 QGYLQCPYHGWVYDESGGVVSIPSEGENFKPRASLKAKQYHTCEQDGFIYVCLTEEIKPQ 121
Query: 171 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
P +P G+ + +V +N +D+ H H F K +
Sbjct: 122 FSPFSMPYYQQPGWH-YVRVVHRFNNNVTNCAENFIDIPHTVSVHPGIFRKSY 173
>gi|218528693|ref|YP_002419509.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
extorquens CM4]
gi|218520996|gb|ACK81581.1| Rieske (2Fe-2S) domain protein [Methylobacterium extorquens CM4]
Length = 361
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 131/346 (37%), Gaps = 41/346 (11%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVAGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 117 GRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 170
+ CP+HGW + TDG+C +P ++ + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 227
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 228 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 272
P +S + P +++EFR P + L I +
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI-------------K 250
Query: 273 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 332
A + P +T L + ++ P + L R F L +D +++
Sbjct: 251 AGAKRVANYTFATPMGPNRTMLTNALYWSMPALNLLKPIARPLMRQF----LTQDQQVLQ 306
Query: 333 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 378
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|410421746|ref|YP_006902195.1| iron-sulfur protein [Bordetella bronchiseptica MO149]
gi|427819786|ref|ZP_18986849.1| iron-sulphur protein [Bordetella bronchiseptica D445]
gi|427825215|ref|ZP_18992277.1| iron-sulphur protein [Bordetella bronchiseptica Bbr77]
gi|408449041|emb|CCJ60727.1| iron-sulphur protein [Bordetella bronchiseptica MO149]
gi|410570786|emb|CCN18984.1| iron-sulphur protein [Bordetella bronchiseptica D445]
gi|410590480|emb|CCN05569.1| iron-sulphur protein [Bordetella bronchiseptica Bbr77]
Length = 453
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGEDLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLR-NVKIKSLPCFEQEGMIWIWPGDE 166
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 218
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 219 GWSVPSLVKFLTPASGL 235
W + F+ +G+
Sbjct: 210 AWGELPEMDFVPTPTGM 226
>gi|134290944|ref|YP_001114713.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134134133|gb|ABO58458.1| Rieske (2Fe-2S) domain protein [Burkholderia vietnamiensis G4]
Length = 373
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRAESGAVYALEDRCAHRQVPLHAGVVDGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPG-----DEPPTA 170
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PG DE P
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCRETHGVIFVFPGDATLADERPVP 151
Query: 171 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
+ P+ ++ E+ + + +NL+D+ H F H +
Sbjct: 152 ALESADNPA-YKTR-RFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|339021311|ref|ZP_08645415.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
tropicalis NBRC 101654]
gi|338751585|dbj|GAA08719.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
tropicalis NBRC 101654]
Length = 374
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
NFW+PVA++ ++ P P + R + G +++ CAHR PL G V
Sbjct: 36 NFWYPVAWAHKVRPGKAFPTRYAGHPIALIRPEKGPIYALEDRCAHRQVPLSKGLVEGDC 95
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIP 173
I+C YHGW + GKC +P +V +++ PC E+ G+I+I+PGD T+P
Sbjct: 96 IKCCYHGWAFDRAGKCVTVPYLNRSDVGRPVRAYPCREKAGLIFIFPGDPALAETVP 152
>gi|384135881|ref|YP_005518595.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339289966|gb|AEJ44076.1| Rieske (2Fe-2S) iron-sulfur domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 338
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 122/316 (38%), Gaps = 45/316 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ V FS + + V+FR G + C HR L LG V +
Sbjct: 30 WYAVCFSAQITRRRPLAARVAGRDLVLFRNASGRVHALSRYCTHRGADLALGRVEGAHLA 89
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPC 174
C YHGW++ DG+C ++P+ R + ++ E G+ W++ G E PP +
Sbjct: 90 CAYHGWQFCGDGRCTRIPAHPDRPIPDFAHTRAYATCELAGITWVYLGGEARPPELRVFS 149
Query: 175 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--WSVPSLV----- 226
L + + E V + + +++++LD+AH F H T + ++P L
Sbjct: 150 ELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTIGRRTPAAIPRLSFETDG 207
Query: 227 ---KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHV 283
+ GL YW P + I +P + G
Sbjct: 208 GNRILIRNGGGLLEYWFP---------------QMWILRPTEGRGG--------FLNFVT 244
Query: 284 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 343
P + TR+L FA + VP M L+R ++ +VL ED R+V Q R A
Sbjct: 245 FTPVDEETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQRVVESQHPRPIPEAL 301
Query: 344 VWNLPVGYDKLGVRYR 359
V D VR+R
Sbjct: 302 RMEAHVPADAPQVRFR 317
>gi|358457313|ref|ZP_09167532.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357079491|gb|EHI88931.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 360
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
L W+PVA S +++D V +E V++R D + ++ C HR PL LG+ N
Sbjct: 28 LARHWYPVALSREVRDQP-VAARLLDERLVVYRAGDAVV-VARDICPHRGVPLTLGTGNG 85
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIW--------IWPG 164
I C YHG + G+C +P+ + + + P E+ G++W + PG
Sbjct: 86 ETIACAYHGLRFGESGRCVAIPAQPAAKIPARMTLLTYPAVERYGLVWTCLRPGQELAPG 145
Query: 165 DEPP---TATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-- 217
P A IP + GF+ E+ G L+ LD+AH F HT+TFA
Sbjct: 146 GSAPDGSAAAIPRMPHWDEPGFQQVTCPAFEVAAFAGRQLEGFLDVAHFAFVHTATFADP 205
Query: 218 KGWSVPSLVKFLTPASGLQGYW 239
VP T + YW
Sbjct: 206 NNSEVPDYSLTPTESGFTADYW 227
>gi|434403930|ref|YP_007146815.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428258185|gb|AFZ24135.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 502
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NEGRI 119
W+PVA L P + + +V++R K G C ++ C HR L G V ++G +
Sbjct: 31 WYPVAIGECLDPSKPQPIELLGKNFVLWRDKQGKWNCFEDLCPHRLVRLSEGRVESDGTL 90
Query: 120 QCPYHGWEYSTDGKCEKMP-----STQLRNVK-----IKSLPCFEQEGMIWIWPGD---- 165
C YH W +++ GKC MP T+ RN + P E++G++W+WP
Sbjct: 91 LCAYHAWRFNSVGKCVSMPQSKDEETEARNCASSRSCVTVYPLQERQGLLWLWPESGSQA 150
Query: 166 -------EPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 216
EP IP L P A + +LP ++N+ D AH P +H +
Sbjct: 151 LIESKLKEP--RVIPELEETPERIVNRSAWNIRDLPYGWDYFIENIADPAHVPVSHHNIM 208
Query: 217 AKGWSVPSL-----VKFLTPASGLQGYWDPYPIDME-----FRPPCMVLSTIGISKPG 264
+ + V+ L+ G P P D+E F+PPC+ + + K G
Sbjct: 209 GSRYKDANYFDMVSVRKLSTQEGFSFETKPTPPDIETLINDFQPPCL-MRVYSVDKSG 265
>gi|443311426|ref|ZP_21041054.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442778464|gb|ELR88729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 354
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 48/272 (17%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
N+W+ V ++ +LK ++P + I+R ++G +++ C H+ LH G V
Sbjct: 25 NYWYAVGWADELKIGEIMPVVIWSRAIAIYRDQNGQIHALEDACPHKGVQLHRGKVTGCN 84
Query: 119 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 171
+ C YHGWE++ DG C +P + +L + ++ P E+ +IWI+PGD T
Sbjct: 85 LACGYHGWEFNGDGDCVNIPYLPKTQKLPRAQARNYPVEEKYNLIWIFPGDPALANTSDL 144
Query: 172 --IPCL-------LPPSG-FEIHAEIVME--LPIEHGLL-----------LDNLLDLAHA 208
IP L +P S F+ H I E + + HG L L NL + A
Sbjct: 145 PNIPELTQKEWLVVPLSARFQAHFSICNENTMDVFHGFLHQKLQGWFDPVLINLRETETA 204
Query: 209 PFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 268
+GW + KFL S P+ +++ P S G+S
Sbjct: 205 VCADYQVSYRGW----MAKFLG-LSQTANQVTTLPVAVQYHYPNYYTSLEGVS------- 252
Query: 269 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 300
+ +L +L V SR +++ L
Sbjct: 253 ------SLYLFRLPVSATESRSFALFFFKVRL 278
>gi|75427753|sp|P94679.1|TSAM1_COMTE RecName: Full=Toluene-4-sulfonate monooxygenase system iron-sulfur
subunit TsaM1; AltName: Full=TS methylmonooxygenase
system, oxygenase M; AltName: Full=Toluenesulfonate
methyl-monooxygenase oxygenase component TsaM1
gi|1790867|gb|AAC44804.1| toluenesulfonate methyl-monooxygenase oxygenase component TsaM
[Comamonas testosteroni]
Length = 347
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
++N W+ A+ T++ + + EP +++R G ++N C HR+ PLH+G
Sbjct: 3 IRNCWYVAAWDTEIPAEGLFHRTLLNEPVLLYRDTQGRVVALENRCCHRSAPLHIGRQEG 62
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG +++ G C ++P + K IKS P E+ ++WIW GD P P
Sbjct: 63 DCVRCLYHGLKFNPSGACVEIPGQEQIPPKTCIKSYPVVERNRLVWIWMGD--PARANPD 120
Query: 175 LLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTSTFA 217
+ + E M+ + L++DNLLD H + H +T
Sbjct: 121 DIVDYFWHDSPEWRMKPGYIHYQANYKLIVDNLLDFTHLAWVHPTTLG 168
>gi|294085287|ref|YP_003552047.1| iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664862|gb|ADE39963.1| iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322]
Length = 460
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 43 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTC 102
L +GP P + FWFP+ S ++ + + E V++R ++G G + C
Sbjct: 33 ELTETGPRTPGGEYWRRFWFPICLSDEVTNRPLRK-RILSEDLVVYRDQEGNCGLLHLHC 91
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
+HR L G V E ++C YHGW Y DG + P S VK + P E +G
Sbjct: 92 SHRNMSLEFGIVEERGLRCAYHGWLYDYDGTVIETPGEPKGSPICEKVKQGAYPVKEFKG 151
Query: 158 MIWIWPGDEPPTATIPCLLPPSGFEIHA-EIV---MELPIEHGLLLDNLLDLAHAPFTHT 213
+++ + G P A IP FE+ E+V + P + + +N +D H + HT
Sbjct: 152 LVFAYMG---PMAEIPPFPIYDTFELDGHELVPYRLSYPCNYLQVAENTMDPIHTVYLHT 208
Query: 214 ----STFAKGWSVPSLVKFLTPASGL 235
+ F + W + L+KF + L
Sbjct: 209 LVGETQFEESWGITPLLKFHDSDTSL 234
>gi|148557174|ref|YP_001264756.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502364|gb|ABQ70618.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 362
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 86 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 143
V++R + G + + C HR PL G + R++C YHG+E+ DG+C +PS +
Sbjct: 49 VLYRTEAGEVAALPDRCPHRFMPLSQGWLIGDRLRCAYHGFEFGPDGRCAHIPSQGVVPG 108
Query: 144 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEHGLLL 199
++I+ P E +WIWPGD P P LLPP G++ + L
Sbjct: 109 TMRIRPYPVVEHGLWVWIWPGD--PELADPALLPPDYSRPGYDSFVHFQASVKCHFLKLQ 166
Query: 200 DNLLDLAHAPFTHTSTFAKG 219
+NLLD H F H F G
Sbjct: 167 ENLLDSTHPTFLHEGMFDDG 186
>gi|33594581|ref|NP_882225.1| (Fe-S)-binding protein [Bordetella pertussis Tohama I]
gi|384205878|ref|YP_005591617.1| iron-sulfur protein [Bordetella pertussis CS]
gi|33564657|emb|CAE43979.1| iron-sulphur protein [Bordetella pertussis Tohama I]
gi|332383992|gb|AEE68839.1| iron-sulfur protein [Bordetella pertussis CS]
Length = 453
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGENLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLR-NVKIKSLPCFEQEGMIWIWPGDE 166
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 218
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 219 GWSVPSLVKFLTPASGL 235
W + F+ +G+
Sbjct: 210 AWGELPEMDFVPTPTGM 226
>gi|423119627|ref|ZP_17107311.1| hypothetical protein HMPREF9690_01633 [Klebsiella oxytoca 10-5246]
gi|376398281|gb|EHT10908.1| hypothetical protein HMPREF9690_01633 [Klebsiella oxytoca 10-5246]
Length = 345
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG +
Sbjct: 21 RLARCWHPVARAEDIGA-APVKAVLLDEQLVIYRVK-GQVVVARDVCPHRGVPLTLGFHD 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEP- 167
I CPYHG + DG C ++PS+ R V K +L C+ E+ G+IW + + P
Sbjct: 79 GEGIVCPYHGLRFGEDGLCNRIPSSPDRPVPAKLNLTCYAVEERYGLIWTCLAFDAENPM 138
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTLPH-WDDEGFQQINCPGFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQLVPDY 197
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQN 270
+ TP YW YP EFR P +T+ I PG+
Sbjct: 198 IPQETPFGFTADYWSSVGNYPASSEFRAPDGFQWLRHFELHLPFTATLTIHFPGE----- 252
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
L ++ P S + TR+ ++ +F HVP + F +V ED +
Sbjct: 253 -----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEV--HAFNLRVFEEDRLM 302
Query: 331 VLGQQ-ERM 338
V Q+ ER+
Sbjct: 303 VETQRPERL 311
>gi|302787751|ref|XP_002975645.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
gi|300156646|gb|EFJ23274.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
Length = 547
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-GRI 119
W+PV+ DL PF V+++ +G + C HR PL G ++E G +
Sbjct: 94 WYPVSLVEDLDPKAATPFKLLGREIVVWKDGEGNWRAFSDQCPHRLAPLSEGRIDENGWL 153
Query: 120 QCPYHGWEYSTDGKCEKMPSTQLRNVKIK----------SLPCFEQEGMIWIWPGD---- 165
QC YHGW + DG C K+P + + K S P +G++++WP +
Sbjct: 154 QCSYHGWSFKGDGSCGKIPQAATQGPESKAVASPRACAISFPAVVSQGLLFVWPDEKGWE 213
Query: 166 -----EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 220
+PP +P + F I +L + L++N+ D +H F H K
Sbjct: 214 SAQRTQPP--QLPAVFDDPSFST-VTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGK-- 268
Query: 221 SVPSLVKFLTPASGLQGYW-------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 271
K LT +G W D I EF PC ++ I I L+G T
Sbjct: 269 --RDRAKPLTFKVDSRGPWGFSGANSDTPKITAEFLAPCYYINKIEIPVTLPLQGPKT 324
>gi|386399030|ref|ZP_10083808.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
gi|385739656|gb|EIG59852.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
Length = 452
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 102
+ +G P ++++W P A +L D + P E V+FR + G G + C
Sbjct: 10 ITRTGAKDPCGKLMRSYWQPAALVDELDGDRPIRPVRLLGENLVLFRDETGRYGLIDRHC 69
Query: 103 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 157
AHR L G + G ++C +HGW + G+C + P S +NV+ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKGSKLCQNVRQRSYPVVEKSG 129
Query: 158 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 211
++W + G+ P A + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 212 H 212
H
Sbjct: 184 H 184
>gi|51243146|gb|AAT99362.1| unknown [Sphingomonas sp. tfd44]
Length = 425
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 47 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQNTCAH 104
+G P L+ FW PV S L + P + E + FR DG+ G + C H
Sbjct: 13 TGRGTPMGEALRRFWIPVLLSEQLSEPDGPPRRLEIMGETFAAFRNTDGVVGILDEQCCH 72
Query: 105 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIW 160
R L LG V I+C +HGW+++ DG + P+ + KS P E+ GMIW
Sbjct: 73 RGASLVLGRVEGCGIRCLFHGWKFAVDGTIMETPNVLDPRFKEKFRAKSYPVREEGGMIW 132
Query: 161 IWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
++ G EPP P P+ + V++ L + L+D +H H FA
Sbjct: 133 MYMGPAELEPPFPHWPYFDVPAENRLAVAFVVD-ECNFVQLGEALVDSSHLTILHKDIFA 191
Query: 218 K 218
+
Sbjct: 192 R 192
>gi|359478793|ref|XP_002283586.2| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like [Vitis
vinifera]
Length = 473
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 144/358 (40%), Gaps = 61/358 (17%)
Query: 61 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 109
W+PVA DL D +V +D E W +F + CAHR PL
Sbjct: 20 WYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVF----------DDACAHRLAPL 69
Query: 110 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 160
G +++ GR+QC YHGW ++ G C+ +P + + P Q G++W
Sbjct: 70 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQHGIVW 129
Query: 161 IWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHT 213
WP +P I P +P + + + + P + +L++N++D AH + H
Sbjct: 130 FWPNTDPQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMDPAHVAYAHY 189
Query: 214 STF----AKGWSVP----SLVKFLTPASGLQGYWDPYPIDM-EFRPPCMVLSTIGI---- 260
AK + ++ S + G+ + +F PPC+ + +
Sbjct: 190 GIVQIPQAKDRXADREGGTPIEISVKRSAIDGFDAERELARSKFIPPCLYYTCLDFPAYQ 249
Query: 261 SKPGKLEGQNTRQCATHLHQ-----LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 315
S G + ++H+ + +C+P S +RL++ +F H+ +++
Sbjct: 250 SNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTDHI-IPRWM 308
Query: 316 WRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLWRDALEKG 368
+L+ DL L+ L +++ M G + W+ +P D V +R W G
Sbjct: 309 LHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKSDAHIVAFRAWLRKYSGG 366
>gi|159480512|ref|XP_001698326.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
gi|158282066|gb|EDP07819.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
Length = 365
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 31/325 (9%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVN-EGR 118
W+PVAF+ DL P V++ K+ V ++ C HR PL G + G
Sbjct: 6 WYPVAFTKDLDPAKPHRVTLLGIPMVVWWDKNAAAWRVFEDVCPHRLVPLSEGRITPSGL 65
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-----KSLPCFEQEGMIWIWPGDEPPTAT-- 171
++C YHGW +S DGKCE +P C ++G++++ G
Sbjct: 66 LECGYHGWAFSGDGKCEVIPQVSQGKCDTPRACATGYHCAVRQGLLFVGAGSGGGAEEAR 125
Query: 172 ---IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 226
+ L P G + ++ +LP + L++N+LD +H PFTH ++ + G L
Sbjct: 126 IPLVSELEEPGGKWLSQDVWRDLPYDWSTLMENVLDSSHVPFTHHASMSNRNGPYDLKLT 185
Query: 227 KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLP 286
+T A G G W P + P + + P L+ + + L ++ +P
Sbjct: 186 SAITDA-GFSGMWTTGPRAGKLGP-----QSTTFTAPCFLKHRLDSKGFASLTVVYA-VP 238
Query: 287 SSRKKTRLLYRMSLDFASVLKHVPF--MQYLWRHFAEQVLNED--LRLVLGQQERMNNGA 342
+ RL+ R L F + + F + W H + VL ED + L LG++E A
Sbjct: 239 MEPGRCRLINRNVLRFNNAIPEAIFGLVPSWWWHVSSHVLLEDDQIFLHLGEEETARRRA 298
Query: 343 N------VWNLPVGYDKLGVRYRLW 361
V +P D + ++ W
Sbjct: 299 GGLGHSQVCYMPSQADTYVIAFQRW 323
>gi|91782296|ref|YP_557502.1| aromatic acid dioxygenase alpha subunit [Burkholderia xenovorans
LB400]
gi|91686250|gb|ABE29450.1| phthalate 4,5-dioxygenase, oxygenase subunit [Burkholderia
xenovorans LB400]
Length = 440
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTM-VPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ FW P S+DL D E + FR +G G V + C HR
Sbjct: 14 GPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEGRVGLVDHACPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWI 161
PL G ++C YHGW++ DG+ + P+ + + V+IKS PC E+ G++W
Sbjct: 74 APLVFGRNENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIKSYPCRERNGIVWT 133
Query: 162 WPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGL-------LLDNLLDLAHAPFTHTS 214
+ GD A+ L P E + V + + ++ +D AHAP H
Sbjct: 134 YMGD----ASADGLPPLPNLEWNMVPVENVHFSFRVQECNWLQAVEGEIDSAHAPILHGR 189
Query: 215 TFAKG 219
++G
Sbjct: 190 IDSQG 194
>gi|86608774|ref|YP_477536.1| Rieske family iron-sulfur cluster-binding protein [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557316|gb|ABD02273.1| iron-sulfur cluster-binding protein, Rieske family [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 339
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+ FW+PV + L+ + PF+ E V++ K G P V + C HR+ L G V +
Sbjct: 9 FRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCD 68
Query: 117 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTA- 170
G I+CPYHGWE+ G C K+P Q R + +I + C + G W+ +P
Sbjct: 69 GHIRCPYHGWEFDGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLHPQPLRGI 128
Query: 171 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
IP PS IH E + +N D AH F H +TF
Sbjct: 129 PVIPEAEDPSYRLIH-EFYERWECASLRICENEFDAAHISFVHQNTFGS 176
>gi|347761781|ref|YP_004869342.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
gi|347580751|dbj|BAK84972.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
Length = 382
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 29 KQSLDIVKGKLPRKSLNVSGPVQPYNTRL----KNFWFPVAFSTDLKDDTMVPFDCFEEP 84
KQS + + L S+ S PV + R +FW+PVA+S +LK + +P
Sbjct: 4 KQSRETMDQSLSPDSMQSSAPVTGRDLRRIRANPDFWYPVAWSRELKPGKTIGTRYAGQP 63
Query: 85 WVIFRGKDGIPGCV---QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP--- 138
+ R +G G V ++ CAHR PL G+V +QC YHGW Y G+C +P
Sbjct: 64 IALVRPLEG--GSVFALEDRCAHRQVPLSKGTVKGDSVQCCYHGWAYGRSGRCIDVPYLG 121
Query: 139 STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
+L N +++ P E +G+I+I+PGD T P
Sbjct: 122 KGKLPN-GVRTYPVREVDGLIFIFPGDVTKAETTP 155
>gi|411003190|ref|ZP_11379519.1| oxygenase Rieske iron-sulfur component [Streptomyces globisporus
C-1027]
Length = 379
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA S ++ + + E ++R + G +++ CAHR PL +G V+
Sbjct: 35 DFWYPVALSRSVRKEGVAAAVFAGERIALYRARSGAVHALEDRCAHRQVPLSMGVVDGET 94
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YH W Y DG+ ++P + + +++ P E G+++++PGD A P
Sbjct: 95 LRCCYHAWAYRGDGRISQIPYLAKGDARPPRGVRAYPVREAYGLVFVFPGDPEKAAVTPL 154
Query: 175 -LLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAK 218
+P + + + + L +NLLD+ H F H K
Sbjct: 155 PDVPAFASPRYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVVGK 200
>gi|91779882|ref|YP_555090.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia xenovorans
LB400]
gi|91692542|gb|ABE35740.1| putative rieske (2Fe-2S) domain protein [Burkholderia xenovorans
LB400]
Length = 406
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTEGGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 119 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 165
I+C YHGW Y GKC +P + ++S PC E EG+I+++PG+
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGN 160
>gi|379011985|ref|YP_005269797.1| hypothetical protein Awo_c21320 [Acetobacterium woodii DSM 1030]
gi|375302774|gb|AFA48908.1| hypothetical protein containing a rieske (2Fe-2S) domain
[Acetobacterium woodii DSM 1030]
Length = 322
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+KN W+ + S ++K + + E V++R + G C+ + C HR L G++
Sbjct: 2 IKNQWYGILNSNEIKKNKLTGVTRMGEKLVLWRDETGAVKCIFDQCCHRGASLSAGTLVH 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGD-EPPTA 170
I+CP+HG+ Y G+ ++P+ + + K+ + E+ G IW+W G +
Sbjct: 62 DTIKCPFHGFSYDGTGRVVQIPANGKKAPVPEHFKVNAYVVKEKYGFIWLWYGAFQEVLP 121
Query: 171 TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 219
IP +GF + P+ + ++N LD+ H PF H ++ +G
Sbjct: 122 EIPFFEYLRTGFS-YGSFSEVWPVHYTRAIENQLDVVHLPFVHANSIGRG 170
>gi|356525253|ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 531
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 42/312 (13%)
Query: 92 DGIPGCVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QL 142
+G+ + C HR PL G +++ GR+QC YHGW ++ G+C+ +P
Sbjct: 119 EGVWQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECKLIPQAPPDGPPVHTS 178
Query: 143 RNVKIKSLPCFEQEGMIWIWPGDEPPTATI-----PCLLPPSGFEIHAEIVMELPIEHG- 196
+ + + P Q ++W WP +P I P +P + +++ I +G
Sbjct: 179 KKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPYIPELDDPSYTKLMGNRDISYGY 238
Query: 197 -LLLDNLLDLAHAPFTHTSTF----------AKGWSVPSLVKFLTPASGL---QGYWDPY 242
+L++NL+D AH P+ H +G L +G QG+
Sbjct: 239 EVLIENLMDPAHVPYAHYGLMRTPKPKVKVDREGGRPLELSIETLDINGFTANQGW---- 294
Query: 243 PIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 302
+F PPC+ +P + VC+P S K+RL++ +F
Sbjct: 295 -SKSKFMPPCIFYVYTDSDQPASSAETQKSSAQKKFALIFVCVPVSPGKSRLIWCFPRNF 353
Query: 303 AS-VLKHVPFMQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGV 356
+ K VP ++++ ++L+ DL L+ + +Q+ ++ G W+ +P D L +
Sbjct: 354 GVWIDKIVP--RWIFHVGQNRILDSDLYLLHVEEQKIVDIGPKNWHKACFVPTKSDALVI 411
Query: 357 RYRLWRDALEKG 368
YR W G
Sbjct: 412 GYRNWLKKYAGG 423
>gi|192289585|ref|YP_001990190.1| phthalate 4,5-dioxygenase [Rhodopseudomonas palustris TIE-1]
gi|192283334|gb|ACE99714.1| Phthalate 4,5-dioxygenase [Rhodopseudomonas palustris TIE-1]
Length = 452
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L+ + + P E V+F+ + G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDETGRYGLIDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DGKC P S +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCIDTPAEPAGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 162 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFIAPDTHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|89054066|ref|YP_509517.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863615|gb|ABD54492.1| vanillate O-demethylase oxygenase subunit [Jannaschia sp. CCS1]
Length = 346
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
LKN W+ A+ +++ D + E +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVRTD-LQQIMVLGEKICMFRTQSGDLVALEDACPHRKLPLSKGRIKG 61
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHG ++ G C P N ++ + P E+ G+IWIW G+ P
Sbjct: 62 DTVECGYHGLTFNCAGTCVWAPGASGIPSNARVHAYPLAEKYGLIWIWMGN-------PA 114
Query: 175 LLPPSG-FE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 217
L PS FE I+ MEL + L+ DNLLD H + H S+FA
Sbjct: 115 LADPSDIFEIENYGNPDWGINRGAAMELDCNYLLMCDNLLDPTHVAWVHQSSFA 168
>gi|226505578|ref|NP_001147604.1| LOC100281213 [Zea mays]
gi|195612454|gb|ACG28057.1| pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 100 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSL 150
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 151 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 201
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 202 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 246
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 247 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 306
+F PC T P EGQ + A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGT-----PFVQEGQKKK--APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 307 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 361
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 351 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 409
>gi|39934058|ref|NP_946334.1| phthalate 4,5-dioxygenase [Rhodopseudomonas palustris CGA009]
gi|39647906|emb|CAE26426.1| possible phthalate dioxygenase [Rhodopseudomonas palustris CGA009]
Length = 452
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 48 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 106
GP P ++ +W P A +L+ + + P E V+F+ + G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDETGRYGLIDRDCPHRG 73
Query: 107 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 161
L G + G ++C +HGW + DGKC P S +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCIDTPAEPAGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 162 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFIAPDTHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|414873470|tpg|DAA52027.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 100 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSL 150
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 151 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 201
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 202 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 246
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 247 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 306
+F PC T P EGQ + A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGT-----PFVQEGQKKK--APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 307 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 361
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 351 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 409
>gi|392978443|ref|YP_006477031.1| (hypo)xanthine hydroxylase [Enterobacter cloacae subsp. dissolvens
SDM]
gi|392324376|gb|AFM59329.1| (hypo)xanthine hydroxylase [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 344
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 141/344 (40%), Gaps = 50/344 (14%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R KD + ++ C HR PL LG +
Sbjct: 20 RLAKCWHPVARACDIGA-APVKATLLDEALVIYRVKDQV-VVARDVCPHRGVPLSLGFHD 77
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 167
E I CPYHG + DG+C ++PS+ + V K + E+ G+IW P +
Sbjct: 78 EHGIICPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLINYAVEERFGLIWTCLAFDPDNPV 137
Query: 168 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 225
P T+P GF+ E+ G ++ LD+AH + HTSTFA VP+
Sbjct: 138 PLPTMP-HWDDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTSTFADPDNQLVPTY 196
Query: 226 VKFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQN 270
TP + YW YP + + P +T+ I PG+
Sbjct: 197 QPQETPFGFVADYWSSVSNYPASSDVQAPEGFQWLRHFEMHLPFTATLTIHFPGE----- 251
Query: 271 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 330
+ L ++ P S + TR+ ++ +F H+P + F ++ ED +
Sbjct: 252 -----SRLVIMNAASPVSSRVTRMFAPIARNFD---LHIPVEEV--HAFNLRIFEEDRLM 301
Query: 331 VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 374
V Q+ + DK + YR +G K++ F
Sbjct: 302 VETQRPESLPLDLTLEAHIPADKSSIAYR-------RGLKKMGF 338
>gi|398810739|ref|ZP_10569550.1| Rieske (2Fe-2S) domain-containing protein [Variovorax sp. CF313]
gi|398082178|gb|EJL72937.1| Rieske (2Fe-2S) domain-containing protein [Variovorax sp. CF313]
Length = 438
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 44 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 103
L GP +P L+ +W P+A +++ + P E V+++ G G V C
Sbjct: 10 LTEVGPGKPMGDYLRRYWHPIAGASEFDGKAVKPLRILGEDLVLYKDLSGNYGLVDRRCP 69
Query: 104 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQ 155
HR + G V + ++C YHGW+Y G+C P + RN KIK+ P E+
Sbjct: 70 HRNADMSYGYVEKCGLRCSYHGWQYDQGGQCIHQPFEETLDPGARMRRNTKIKAYPVQEK 129
Query: 156 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 214
G++W + G P L + E+P +N +D H +TH +
Sbjct: 130 AGLLWAYMGPLPAPLLPDWELFNYKNGFAQAVFAEIPCNWFQCQENSIDPVHFEWTHNN 188
>gi|421739886|ref|ZP_16178173.1| ring-hydroxylating dioxygenase, large terminal subunit
[Streptomyces sp. SM8]
gi|406691728|gb|EKC95462.1| ring-hydroxylating dioxygenase, large terminal subunit
[Streptomyces sp. SM8]
Length = 351
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 132/341 (38%), Gaps = 60/341 (17%)
Query: 53 YNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 112
+ T L+N W+PV S + + M EPW++FR G + + C HR+ PL LG
Sbjct: 19 HATGLRNQWYPVLPSHFVANGEMKRVVRLGEPWLLFRRPTGELHMIADRCPHRSAPLSLG 78
Query: 113 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPP 168
R+ C YHG + +G K+P N++ + SLP E+ G ++ W GDE
Sbjct: 79 QHLGDRVACLYHGVQVDGEGTVVKVPGLPGCNLEGKRLVTSLPVREEHGAVFAWFGDEAH 138
Query: 169 TATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 221
P +LP +GF +AE +DN+LD H F H ++ +
Sbjct: 139 PEPAPLVLPERLTDPDTAGFLNYAEWGAPWR----FYIDNVLDPMHGAFLHGTSHSMAGG 194
Query: 222 VPSLVKFLTPASGLQGYWDPYP------------------IDME-----FRPPCMVLSTI 258
S +F +G +++ +D+E + P +
Sbjct: 195 AKS-ARFRIRETGHGFFFEKTDQVGVNFDWVEFGRTGVDWVDLEIPYQPYAGPGGAFGIV 253
Query: 259 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH 318
G+ P + A + R R LYRM+L+ RH
Sbjct: 254 GMVTP-----ITATESAIFHWRTRAVQGWERDSWRFLYRMTLEA--------------RH 294
Query: 319 FAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 359
+VL +D ++ E + G N++ +G ++ YR
Sbjct: 295 --HEVLEQDRTMLEEMPENADTGENLYQHDLGVVRIRRMYR 333
>gi|162146374|ref|YP_001600833.1| ubiquinol-cytochrome c reductase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161784949|emb|CAP54492.1| putative Ubiquinol-cytochrome c reductase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 369
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA+S +LK + +P + R +G +++ CAHR PL G V
Sbjct: 38 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPVEGGVFALEDRCAHRQVPLSKGVVKGQA 97
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD ++P
Sbjct: 98 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPALADSVP 154
>gi|408414289|ref|YP_006624996.1| iron-sulfur protein [Bordetella pertussis 18323]
gi|401776459|emb|CCJ61651.1| iron-sulphur protein [Bordetella pertussis 18323]
Length = 453
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 52 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 111
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGENLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 112 GSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLR-NVKIKSLPCFEQEGMIWIWPGDE 166
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 167 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 218
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 219 GW-SVPSLVKFLTPAS 233
W +P + TP S
Sbjct: 210 AWGELPEMDFVPTPTS 225
>gi|209543624|ref|YP_002275853.1| Rieske (2Fe-2S) domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531301|gb|ACI51238.1| Rieske (2Fe-2S) domain protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 357
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+FW+PVA+S +LK + +P + R +G +++ CAHR PL G V
Sbjct: 26 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPVEGGVFALEDRCAHRQVPLSKGVVKGQA 85
Query: 119 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 173
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD ++P
Sbjct: 86 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPALADSVP 142
>gi|172065001|ref|YP_001815713.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171997243|gb|ACB68160.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MC40-6]
Length = 373
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHGW Y+ D G+C +P +L N +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRDRLPN-GVRAYPCREAHGLIFVFPGD----ATLAD 146
Query: 175 LLPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P E + E+ + + +NL+D+ H F H +
Sbjct: 147 ERPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|330994111|ref|ZP_08318040.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329758848|gb|EGG75363.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 390
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 40 PRKSLNVSGPVQPYNTRLK---NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPG 96
P ++ S QP R+ +FW+PVA+S DL+ D + P V+ R ++G
Sbjct: 20 PVQADTASRATQPDLRRVDCDPDFWYPVAWSADLRKDKTLAVSYAGTPIVLVRPEEGSVF 79
Query: 97 CVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCF 153
+ + C HR PL G+VN ++C YHGW + G+C +P +L N +++ P
Sbjct: 80 ALYDRCPHRQVPLSKGTVNGQTVRCCYHGWAFGRSGRCIDVPYLGKGKLPN-GVRTFPVR 138
Query: 154 EQEGMIWIWPGDEPPTATIP 173
E G+I+++PG+ T+P
Sbjct: 139 EAGGLIFVFPGNPEKADTVP 158
>gi|115360703|ref|YP_777840.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
AMMD]
gi|170701512|ref|ZP_02892464.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|115286031|gb|ABI91506.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria AMMD]
gi|170133569|gb|EDT01945.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 373
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++C YHGW Y+ D G+C +P +L N +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRDRLPN-GVRAYPCREAHGLIFVFPGD----ATLAD 146
Query: 175 LLPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
P E + E+ + + +NL+D+ H F H +
Sbjct: 147 ERPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|221233711|ref|YP_002516147.1| ring hydroxylating diooxygenase [Caulobacter crescentus NA1000]
gi|220962883|gb|ACL94239.1| ring hydroxylating diooxygenase [Caulobacter crescentus NA1000]
Length = 369
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 36/180 (20%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-- 116
+ W+ A S DLK T + EP ++ R + G +++ C HRA L G ++
Sbjct: 26 DAWYVAALSPDLKPGTKSKREYLGEPVLLGRTRAGQVYAIRDICPHRAAALSAGRLHREA 85
Query: 117 ---GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEP 167
++CPYHGW + DG C +PS + V+++ P E +G++WIW +P
Sbjct: 86 DGTDSVECPYHGWRFGPDGACTAIPSLTADSDFDIAKVRVRRYPTVESQGLVWIWMSSDP 145
Query: 168 ---------------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
P L+ ++IH I+H +L L+D AH P+ H
Sbjct: 146 RFDGQPPEPPPVIPGVVGGKPKLVDHLDYDIH--------IDHAVL--GLIDPAHGPYVH 195
>gi|375260136|ref|YP_005019306.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca KCTC
1686]
gi|397657213|ref|YP_006497915.1| Vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca E718]
gi|365909614|gb|AEX05067.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca KCTC
1686]
gi|394345693|gb|AFN31814.1| Vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca E718]
Length = 345
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 127/308 (41%), Gaps = 42/308 (13%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARACDIGP-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHD 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTAT 171
E I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCLAFDPENPM 138
Query: 172 IPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 226
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 139 PLPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQVVPNYN 198
Query: 227 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 271
T + YW YP EFR P +T+ I PG+
Sbjct: 199 PQETSFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------ 252
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMV 303
Query: 332 LGQQ-ERM 338
Q+ ER+
Sbjct: 304 ETQRPERL 311
>gi|416934825|ref|ZP_11933869.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia sp. TJI49]
gi|325525304|gb|EGD03155.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia sp. TJI49]
Length = 370
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 23 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 82
A P + L+ G L R V P+ P + W+P+A+S +L+ +
Sbjct: 3 AVPLSDNTPLESSGGALVRDLRRV--PIHP------DHWYPLAWSRELRRGKTLGVRFAG 54
Query: 83 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 141
EP V+ R + G +++ CAHR PLH G V+ ++C YHGW Y G+C +P
Sbjct: 55 EPIVLVRTESGAVHALEDRCAHRQVPLHAGVVSGETLRCCYHGWTYDCASGRCVDVPYLG 114
Query: 142 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 196
+ +++ PC E G+I+++PGD P S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPALASADDRAYKTRRFGREVKCHYS 174
Query: 197 LLLDNLLDLAHAPFTHTSTFAK 218
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|295690999|ref|YP_003594692.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter segnis ATCC
21756]
gi|295432902|gb|ADG12074.1| Rieske (2Fe-2S) iron-sulfur domain protein [Caulobacter segnis ATCC
21756]
Length = 370
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+++ W+ S DLK + EP ++ R + G + + C HRA L G V+
Sbjct: 25 VRDAWYVACLSPDLKPGKTAKHEFLGEPVLLGRTRQGEAYALGDLCPHRAAALSAGRVHR 84
Query: 117 -----GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD 165
I+CPYHGW + DG C+ +PS + V+++ P E +G++WIW
Sbjct: 85 EADGTDSIECPYHGWRFGADGACKAIPSLTADSGFDISKVRVRRYPVVESQGLVWIWMAS 144
Query: 166 E--------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
+ P TIP ++ ++ + ++ I+H +L L+D AH P+ H
Sbjct: 145 DPRRAAPPPEPPPTIPGVVGGKP-KLVDHLDYDVHIDHAVL--GLIDPAHGPYVH 196
>gi|421727698|ref|ZP_16166857.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca M5al]
gi|195973390|gb|ACG63333.1| (hypo)xanthine hydroxylase [Klebsiella oxytoca M5al]
gi|410371447|gb|EKP26169.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca M5al]
Length = 345
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 127/308 (41%), Gaps = 42/308 (13%)
Query: 56 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 115
RL W PVA + D+ V +E VI+R K G ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARACDIGP-APVKATLLDEQLVIYRIK-GQVVVARDVCPHRGVPLTLGFHD 78
Query: 116 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTAT 171
E I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCLAFDPENPM 138
Query: 172 IPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 226
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 139 PLPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTETFADPDNQVVPNYN 198
Query: 227 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 271
T + YW YP EFR P +T+ I PG+
Sbjct: 199 PQETAFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------ 252
Query: 272 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 331
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMV 303
Query: 332 LGQQ-ERM 338
Q+ ER+
Sbjct: 304 ETQRPERL 311
>gi|187921686|ref|YP_001890718.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720124|gb|ACD21347.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 364
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 40 PRKSLNVSGPVQPY-NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 98
P + + + P+Q Y + L+N+W+PVA S + D V + V++R K+G +
Sbjct: 4 PNTNQDAADPIQSYLDKGLRNYWYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGQVRAL 62
Query: 99 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVK-IKSLPCFE 154
++ C HR L LG G + C YHG E G+ K+P+ L K +KS P E
Sbjct: 63 EDRCPHRGARLSLGWNLGGSVACWYHGIEIDGSGEVTKVPAVSNCPLEGQKCVKSYPVEE 122
Query: 155 QEGMIWIWPGDEPPTATIPCLLPPS--GFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFT 211
G I++W GDE P +LP G E + + M + +DN++D H +
Sbjct: 123 HAGAIFLWFGDEAHKEPTPLVLPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYL 182
Query: 212 HTST 215
H ++
Sbjct: 183 HATS 186
>gi|379718492|ref|YP_005310623.1| Rieske iron-sulfur domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|378567164|gb|AFC27474.1| Rieske iron-sulfur domain-containing protein [Paenibacillus
mucilaginosus 3016]
Length = 332
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 124/319 (38%), Gaps = 48/319 (15%)
Query: 61 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 120
W+ + +S +LK ++ V+FR G + C HR L LGS ++
Sbjct: 21 WYALGWSKELKQGRLLRKRIAGRDLVLFRDSAGTVQALHAYCPHRGADLSLGSCEGDLLR 80
Query: 121 CPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP-------GDEP-P 168
CPYH W + DG C +P+ R + + P EQ G++W++P G +P P
Sbjct: 81 CPYHAWTFKGDGTCTSIPAHPDRPIPSFAHTLAYPVQEQAGLLWVYPMTMRELNGRKPEP 140
Query: 169 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 228
A P L P + V E + ++++++D+AH P H T + S + F
Sbjct: 141 PALFPELDDPDLVLAPYDAVWEAHLTR--VIESVIDVAHVPIVHRRTIGRNSSSNIHIDF 198
Query: 229 --------LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 280
+ SGL + +R P L T + + T
Sbjct: 199 EAEGDRITIRNGSGL----------LNYRFPQQWLLTPAEPRRSRFTNYVTFS------- 241
Query: 281 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNN 340
P R+ T + +FA P + ++ ++ QVL+ED +V Q R
Sbjct: 242 -----PVDREVTAIFGYAGRNFAK----FPGVSRIFSLYSAQVLDEDRAVVESQHPRPIP 292
Query: 341 GANVWNLPVGYDKLGVRYR 359
A VG D VR+R
Sbjct: 293 DALRMEAHVGADGPQVRFR 311
>gi|16124990|ref|NP_419554.1| Rieske 2Fe-2S family protein [Caulobacter crescentus CB15]
gi|13421968|gb|AAK22722.1| Rieske 2Fe-2S family protein [Caulobacter crescentus CB15]
Length = 367
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 36/180 (20%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-- 116
+ W+ A S DLK T + EP ++ R + G +++ C HRA L G ++
Sbjct: 24 DAWYVAALSPDLKPGTKSKREYLGEPVLLGRTRAGQVYAIRDICPHRAAALSAGRLHREA 83
Query: 117 ---GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEP 167
++CPYHGW + DG C +PS + V+++ P E +G++WIW +P
Sbjct: 84 DGTDSVECPYHGWRFGPDGACTAIPSLTADSDFDIAKVRVRRYPTVESQGLVWIWMSSDP 143
Query: 168 ---------------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
P L+ ++IH I+H +L L+D AH P+ H
Sbjct: 144 RFDGQPPEPPPVIPGVVGGKPKLVDHLDYDIH--------IDHAVL--GLIDPAHGPYVH 193
>gi|107023140|ref|YP_621467.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116686620|ref|YP_839867.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105893329|gb|ABF76494.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116652335|gb|ABK12974.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 371
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 119 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD T P
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGDATLAETRPFP 151
Query: 176 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
S E+ + + +NL+D+ H F H +
Sbjct: 152 ALESADNPAYKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|427416553|ref|ZP_18906736.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425759266|gb|EKV00119.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 372
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRG--------KDGIPGCVQNTCAHRACPLH 110
N W+ VA S++L D + + +P V++R + + +++ C HR L
Sbjct: 34 NHWYVVAQSSELTDQPL-GVVLWHQPIVLYRDSASADSSVRTQVVHALEDRCPHRQVRLS 92
Query: 111 LGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDE 166
G V +++C YHGW+++ G C ++P +L N ++++ P EQ+G IW++PGD
Sbjct: 93 HGQVQGNQLECVYHGWQFNDTGACVEVPYLSAKQKLPNCRLRTYPVKEQDGFIWLFPGDA 152
Query: 167 PPTATIPCLLPPSGFEIH---AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 223
T+ + P I+ + ++ L++NL+D+ H + W+ P
Sbjct: 153 DQADTLTPMGLPEWDHINYIASYTTIDTQSHFSFLIENLMDMYHGRLHDN---LQAWANP 209
Query: 224 SLVKFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLE 267
L T + + ++D Y ID + + + + +P L+
Sbjct: 210 VLRDIETSPTRVDAHYDAESYYKIDKIYSVGQLFIPAMRKLRPTHLD 256
>gi|329891293|ref|ZP_08269636.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846594|gb|EGF96158.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
Length = 397
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 21 TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTR-LKNFWFPVAFSTDLKDDTMVPFD 79
T A P K ++ P + P + + + W+ VA + D+ ++ ++
Sbjct: 16 TAARPCCYKAAMIADAAPAPSATPEAKAPPTAFGKGFITDAWYFVALARDVPVASLKRYE 75
Query: 80 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV----NEGR-IQCPYHGWEYSTDGKC 134
EP +I R + G +++ C HRA PL G + EG I+CPYHGW + DG C
Sbjct: 76 IMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVEKPGEGETIECPYHGWRFRPDGVC 135
Query: 135 EKMPST------QLRNVKIKSLPCFEQEGMIWIW----------PGDEPP----TATIPC 174
+PS + +K++ P E +GM+++W P EPP + P
Sbjct: 136 AAIPSLVEDQAFEANRIKVRVYPVRESQGMVFVWMAADARNPSEPDQEPPQFPGAVSQPR 195
Query: 175 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 212
L+ F+ H I+H ++ L+D AH P+ H
Sbjct: 196 LVEWMDFDSH--------IDHAVV--GLMDPAHGPYVH 223
>gi|399017736|ref|ZP_10719925.1| Rieske (2Fe-2S) domain-containing protein [Herbaspirillum sp.
CF444]
gi|398102503|gb|EJL92683.1| Rieske (2Fe-2S) domain-containing protein [Herbaspirillum sp.
CF444]
Length = 366
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 57 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 116
+++ W+ A S ++ D ++ + +++R DG P +QN CAHR+ PL G ++
Sbjct: 19 IRDCWYVAALSGEVTRD-LLERTLLGKTVLMYRKLDGTPVVMQNRCAHRSFPLSKGRLDG 77
Query: 117 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 174
++ C YHG Y+ +G+C MPS + +I S P E+ +IWIW GD P
Sbjct: 78 DQVVCGYHGMAYNPEGQCVHMPSLANPPTHARIASYPVQERGPLIWIWMGDA--AKADPA 135
Query: 175 LLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTST 215
L+P + + E + + + +NLLD H P H T
Sbjct: 136 LIPDTSWLDAPEWTTVTGYFHMKSNYVAMHENLLDQTHFPILHADT 181
>gi|254250827|ref|ZP_04944146.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124879961|gb|EAY67317.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 386
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 59 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 118
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 47 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 106
Query: 119 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 175
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD T P
Sbjct: 107 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGDATLAETRPFP 166
Query: 176 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 218
S E+ + + +NL+D+ H F H +
Sbjct: 167 ALESADNPAYKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 211
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,624,799,523
Number of Sequences: 23463169
Number of extensions: 291376354
Number of successful extensions: 505058
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2674
Number of HSP's successfully gapped in prelim test: 3464
Number of HSP's that attempted gapping in prelim test: 495477
Number of HSP's gapped (non-prelim): 6812
length of query: 378
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 234
effective length of database: 8,980,499,031
effective search space: 2101436773254
effective search space used: 2101436773254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)