Citrus Sinensis ID: 017060
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | 2.2.26 [Sep-21-2011] | |||||||
| Q8S528 | 534 | Aldehyde dehydrogenase fa | yes | no | 1.0 | 0.707 | 0.814 | 0.0 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 1.0 | 0.702 | 0.793 | 0.0 | |
| O94788 | 518 | Retinal dehydrogenase 2 O | yes | no | 0.976 | 0.712 | 0.615 | 1e-139 | |
| P11884 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.984 | 0.716 | 0.634 | 1e-138 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.973 | 0.736 | 0.641 | 1e-138 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.984 | 0.714 | 0.634 | 1e-138 | |
| P47738 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.984 | 0.716 | 0.634 | 1e-138 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | no | no | 0.973 | 0.707 | 0.627 | 1e-137 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | no | no | 0.984 | 0.719 | 0.623 | 1e-137 | |
| Q63639 | 518 | Retinal dehydrogenase 2 O | no | no | 0.976 | 0.712 | 0.604 | 1e-137 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/378 (81%), Positives = 344/378 (91%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPAL
Sbjct: 157 MLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPAL 216
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AF
Sbjct: 217 ACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAF 276
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCC
Sbjct: 277 TGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCC 336
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+
Sbjct: 337 AGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEA 396
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S
Sbjct: 397 GATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNS 456
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+
Sbjct: 457 RYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLN 516
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT+LKNPAWL
Sbjct: 517 NYLQVKAVVTSLKNPAWL 534
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/378 (79%), Positives = 338/378 (89%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYYAGWADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL
Sbjct: 161 MFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 220
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAF
Sbjct: 221 ACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAF 280
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK++L LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCC
Sbjct: 281 TGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCC 340
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++
Sbjct: 341 AGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIES 400
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
A LE GG+++G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N +
Sbjct: 401 NATLECGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANET 460
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+
Sbjct: 461 KYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLN 520
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQ+KAVVTAL PAW+
Sbjct: 521 NYLQIKAVVTALNKPAWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 227/369 (61%), Positives = 285/369 (77%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
+ FRYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PAL CG
Sbjct: 145 KTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCG 204
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+V+K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGS
Sbjct: 205 NTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGS 264
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GK++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGS
Sbjct: 265 TEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGS 324
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R FV ES+Y++FV ++ A +RVVG PF +QGPQID +Q+ KIL+ I+SGV GAK
Sbjct: 325 RIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAK 384
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
LE GG+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +G
Sbjct: 385 LECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFG 444
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
L A VFT++++ A T+ A++ G+VWINC++ +A PFGG+K SG GRE G + L Y
Sbjct: 445 LVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYS 504
Query: 364 QVKAVVTAL 372
+VK V +
Sbjct: 505 EVKTVTVKI 513
|
Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/372 (63%), Positives = 280/372 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 143 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 202
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF
Sbjct: 203 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 262
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 263 TGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 322
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG
Sbjct: 323 AGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQE 382
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 383 GAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 442
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L
Sbjct: 443 KYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 502
Query: 361 NYLQVKAVVTAL 372
Y +VK V +
Sbjct: 503 AYTEVKTVTVKV 514
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/368 (64%), Positives = 279/368 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 124 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 183
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF
Sbjct: 184 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 243
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 244 TGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 303
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG
Sbjct: 304 AGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQE 363
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 364 GAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L
Sbjct: 424 KYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 484 AYTEVKTV 491
|
Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/372 (63%), Positives = 281/372 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 145 MVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 204
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K +EQTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AF
Sbjct: 205 ATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAF 264
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 265 TGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 324
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG +
Sbjct: 325 AGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEE 384
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S
Sbjct: 385 GAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNS 444
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 445 KYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQ 504
Query: 361 NYLQVKAVVTAL 372
Y +VK V +
Sbjct: 505 AYTEVKTVTVKV 516
|
Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/372 (63%), Positives = 280/372 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 143 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 202
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH VDK+AF
Sbjct: 203 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAF 262
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 263 TGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 322
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E+VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG
Sbjct: 323 AGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQE 382
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 383 GAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDS 442
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L
Sbjct: 443 KYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 502
Query: 361 NYLQVKAVVTAL 372
Y +VK V +
Sbjct: 503 AYTEVKTVTVKV 514
|
Is capable of converting retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/368 (62%), Positives = 280/368 (76%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 144 MVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 203
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AF
Sbjct: 204 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAF 263
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 264 TGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 323
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG +
Sbjct: 324 AGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEE 383
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 384 GAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNS 443
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 444 KYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQ 503
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 504 AYTEVKTV 511
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/372 (62%), Positives = 279/372 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 141 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 200
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF
Sbjct: 201 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 260
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 261 TGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 320
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 321 AGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 380
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 381 GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 440
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 441 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 500
Query: 361 NYLQVKAVVTAL 372
Y +VK V +
Sbjct: 501 AYTEVKTVTVKV 512
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 223/369 (60%), Positives = 283/369 (76%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
+ RYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMF WK+ PAL CG
Sbjct: 145 KTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCG 204
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+V+K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGS
Sbjct: 205 NTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGS 264
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GK++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGS
Sbjct: 265 TEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGS 324
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R FV ES+Y++FV+++ A +R+VG PF +QGPQID +Q+ KIL+ I+SGV GAK
Sbjct: 325 RIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAK 384
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
LE GG+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +G
Sbjct: 385 LECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFG 444
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
L A VFT++++ A + A++ G+VWINC++ +A PFGG+K SG GRE G + L Y
Sbjct: 445 LVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYS 504
Query: 364 QVKAVVTAL 372
+VK V +
Sbjct: 505 EVKTVTVKI 513
|
Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.702 | 0.849 | 0.0 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.701 | 0.851 | 0.0 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.705 | 0.851 | 0.0 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.705 | 0.857 | 0.0 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 1.0 | 0.707 | 0.846 | 0.0 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.702 | 0.841 | 0.0 | |
| 224064707 | 540 | predicted protein [Populus trichocarpa] | 1.0 | 0.7 | 0.828 | 0.0 | |
| 449482989 | 540 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.7 | 0.833 | 0.0 | |
| 449442933 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.702 | 0.833 | 0.0 | |
| 449440686 | 548 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.689 | 0.817 | 0.0 |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/378 (84%), Positives = 353/378 (93%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPAL
Sbjct: 161 MLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPAL 220
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+ASHM++DKLAF
Sbjct: 221 ACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAF 280
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK+VL+LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCC
Sbjct: 281 TGSTETGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCC 340
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+
Sbjct: 341 AGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVES 400
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LETGG+R G G+YI+PTVF+ VKDDMLIAK+EIFGPVQ+ILK+KDLD+VIQR+N +
Sbjct: 401 GATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFKDLDDVIQRANNT 460
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAAGVFT N++TANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL
Sbjct: 461 HYGLAAGVFTKNINTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLK 520
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT+LKNPAWL
Sbjct: 521 NYLQVKAVVTSLKNPAWL 538
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/378 (85%), Positives = 352/378 (93%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPAL
Sbjct: 162 MLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPAL 221
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+ASHM++DKLAF
Sbjct: 222 ACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAF 281
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGKIVL+LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCC
Sbjct: 282 TGSTETGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCC 341
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+
Sbjct: 342 AGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVES 401
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LETGG+R G G+YI+PTVF+ VKDDMLIAK+EIFGPVQSILK+KDLD+VIQR+N +
Sbjct: 402 GATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNT 461
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAAGVFT N++TANTL RALR G+VW+NCFD FDAAIPFGGYK SGQGREKG YSL
Sbjct: 462 HYGLAAGVFTKNINTANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLK 521
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT+LKNPAWL
Sbjct: 522 NYLQVKAVVTSLKNPAWL 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/378 (85%), Positives = 351/378 (92%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL
Sbjct: 159 MLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 218
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEVDKLAF
Sbjct: 219 ACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAF 278
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCC
Sbjct: 279 TGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCC 338
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 339 AGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIRSGVES 398
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LETGG++LG KG+YI+PTVF+ VKD MLIAKDEIFGPVQSILK+KDL EV+QR+N +
Sbjct: 399 GATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDLGEVVQRANNT 458
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT N+DTANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL
Sbjct: 459 RYGLAAGVFTKNMDTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLK 518
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVV LKNPAWL
Sbjct: 519 NYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/378 (85%), Positives = 350/378 (92%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL
Sbjct: 159 MLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 218
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEVDKLAF
Sbjct: 219 ACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAF 278
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCC
Sbjct: 279 TGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCC 338
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 339 AGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILRYIRSGVES 398
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LETGG++LG KG+YI+PTVF+ VKD MLIA+DEIFGPVQSILK+KDL EV+QR+N +
Sbjct: 399 GATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEIFGPVQSILKFKDLGEVVQRANNT 458
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT N+DTA TL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL
Sbjct: 459 RYGLAAGVFTTNMDTAYTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLK 518
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVV LKNPAWL
Sbjct: 519 NYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/378 (84%), Positives = 347/378 (91%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYYAGWADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPL+MF WKVGPAL
Sbjct: 157 MFVRLFRYYAGWADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPAL 216
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGN++VLKTAEQTPLSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL HM+VDKLAF
Sbjct: 217 ACGNSVVLKTAEQTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAF 276
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGKIVL+L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCC
Sbjct: 277 TGSTETGKIVLELSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCC 336
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEKA A A+KR VGDPFK G++QGPQ+D++QFEKILKYIRSG +
Sbjct: 337 AGSRTFVHEKVYDEFVEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKILKYIRSGAES 396
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LETGG+RLG KGYYI+PTVF+ VKDDMLIAKDEIFGPVQ+ILK+K+LDEVI+R+N S
Sbjct: 397 GATLETGGDRLGTKGYYIQPTVFSDVKDDMLIAKDEIFGPVQTILKFKELDEVIRRANNS 456
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAAGVFT NLDTANT+MRALR G+VWINCFD FDAAIPFGGYK SG GREKG YSL
Sbjct: 457 SYGLAAGVFTQNLDTANTMMRALRAGTVWINCFDTFDAAIPFGGYKMSGIGREKGEYSLK 516
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVTALKNPAWL
Sbjct: 517 NYLQVKAVVTALKNPAWL 534
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/378 (84%), Positives = 349/378 (92%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ RL RYYAGWADKI GLT PADG + VQTLHEPIGVAGQIIPWNFPLLM+AWK+GPAL
Sbjct: 161 LVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPAL 220
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALASHM+VDKLAF
Sbjct: 221 ACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAF 280
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCCC
Sbjct: 281 TGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCCC 340
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 341 AGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVEN 400
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LETGGER G +G++IKPTVF+ V+D MLIA+DEIFGPVQSILK+KDL EVI+R+NA+
Sbjct: 401 GATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANAT 460
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAAGVFT NLDTANTL RAL+VG+VWINCFDVFDAAIPFGGYK SG GREKG YSL
Sbjct: 461 SYGLAAGVFTQNLDTANTLTRALKVGTVWINCFDVFDAAIPFGGYKMSGHGREKGIYSLQ 520
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAV+T LKNPAWL
Sbjct: 521 NYLQVKAVITPLKNPAWL 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/378 (82%), Positives = 349/378 (92%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
MT R+FRYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFP+LMF+WKVGPAL
Sbjct: 163 MTVRIFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPAL 222
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNT+V+KTAEQTPLSA+Y +KL HEAGLP GVLN+VSG+GPTAGAALASHM+VDKLAF
Sbjct: 223 ACGNTVVIKTAEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAF 282
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGKIVL+LA+KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCC
Sbjct: 283 TGSTDTGKIVLELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCC 342
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEKA A A +R VGDPFK GI+QGPQ+DS+QFEKIL+ IRSGV+
Sbjct: 343 AGSRTFVHERVYDEFVEKAKARANQRAVGDPFKEGIEQGPQVDSDQFEKILRIIRSGVES 402
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA L+ GG+R G GYYI+PTVF+ V+DDMLIAK+EIFGPVQSI K+KDLDEVIQRSN S
Sbjct: 403 GANLKAGGDRFGTTGYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNNS 462
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAG+FTHNLDTANTL RAL+VG+VWINC+DVFDAAIPFGGYK SG GREKG YSL+
Sbjct: 463 RYGLAAGIFTHNLDTANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLN 522
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT+LKNPAWL
Sbjct: 523 NYLQVKAVVTSLKNPAWL 540
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449482989|ref|XP_004156463.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/378 (83%), Positives = 347/378 (91%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYY GWADKI GLT PADG YHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPAL
Sbjct: 163 MFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPAL 222
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSAL V+KL HEAGLP GVLNIVSGYGPTAGAALASHMEVDKLAF
Sbjct: 223 ACGNTIVLKTAEQTPLSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAF 282
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK+VL+LA+KSNLKPVTLELGGKSPFIVCEDADVDKA E+AH+ALFFNQGQCCC
Sbjct: 283 TGSTETGKVVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCC 342
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE V+D+FVEKA A RVVGDPF GGI+QGPQ+D+EQF+KILKYI+ G++G
Sbjct: 343 AGSRTFVHEKVHDEFVEKARNRAANRVVGDPFLGGIEQGPQVDAEQFKKILKYIKYGIEG 402
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LE GG+R G+KGYY++PTVF+ VKDDM IA+DEIFGPVQ+ILKYKD+DEVI+R+NAS
Sbjct: 403 GATLEAGGDRFGSKGYYVQPTVFSNVKDDMKIAEDEIFGPVQTILKYKDIDEVIRRANAS 462
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT N++TAN L R+LRVGSVWINCFDVFDAA+PFGGYK SG GREKG YSLS
Sbjct: 463 RYGLAAGVFTQNINTANRLTRSLRVGSVWINCFDVFDAAVPFGGYKMSGHGREKGIYSLS 522
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT L+NPAWL
Sbjct: 523 NYLQVKAVVTPLENPAWL 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442933|ref|XP_004139235.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/378 (83%), Positives = 347/378 (91%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYY GWADKI GLT PADG YHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPAL
Sbjct: 161 MFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPAL 220
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSAL V+KL HEAGLP GVLNIVSGYGPTAGAALASHMEVDKLAF
Sbjct: 221 ACGNTIVLKTAEQTPLSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAF 280
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK+VL+LA+KSNLKPVTLELGGKSPFIVCEDADVDKA E+AH+ALFFNQGQCCC
Sbjct: 281 TGSTETGKVVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCC 340
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE V+D+FVEKA A RVVGDPF GGI+QGPQ+D+EQF+KILKYI+ G++G
Sbjct: 341 AGSRTFVHEKVHDEFVEKARNRAANRVVGDPFLGGIEQGPQVDAEQFKKILKYIKYGIEG 400
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LE GG+R G+KGYY++PTVF+ VKDDM IA+DEIFGPVQ+ILKYKD+DEVI+R+NAS
Sbjct: 401 GATLEAGGDRFGSKGYYVQPTVFSNVKDDMKIAEDEIFGPVQTILKYKDIDEVIRRANAS 460
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT N++TAN L R+LRVGSVWINCFDVFDAA+PFGGYK SG GREKG YSLS
Sbjct: 461 RYGLAAGVFTQNINTANRLTRSLRVGSVWINCFDVFDAAVPFGGYKMSGHGREKGIYSLS 520
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT L+NPAWL
Sbjct: 521 NYLQVKAVVTPLENPAWL 538
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440686|ref|XP_004138115.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/378 (81%), Positives = 350/378 (92%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ RLF YYAGWADKI GLT PADG +HVQ LHEPIGVAGQIIPWNFPL+MFAWKVGPAL
Sbjct: 171 LLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGVAGQIIPWNFPLIMFAWKVGPAL 230
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNT+VLKTAEQTPL+ALYV+KLLHEAGLPPGVLNIVSGYGPTAGAALASHM+VDKLAF
Sbjct: 231 ACGNTVVLKTAEQTPLTALYVAKLLHEAGLPPGVLNIVSGYGPTAGAALASHMDVDKLAF 290
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST+TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCC
Sbjct: 291 TGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCC 350
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE V+++FVEK+ A A +RVVGDPFK G++QGPQIDS+QFEK+L+YI+SG++
Sbjct: 351 AGSRTFVHERVHEEFVEKSKARAQRRVVGDPFKKGVEQGPQIDSDQFEKVLRYIKSGIES 410
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
A LE GG RLG+KGY+I+PTVF+ VKDDMLIAKDEIFGPVQSILK+KD+DEVI R+N++
Sbjct: 411 NATLECGGGRLGSKGYFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIHRANST 470
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLA+G+FT N+DTANTL+R LR G+VW+NCFD+FDAAIPFGGYK SG GREKG YSL
Sbjct: 471 RYGLASGIFTSNIDTANTLIRGLRTGTVWVNCFDIFDAAIPFGGYKMSGIGREKGIYSLQ 530
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT LKNPAWL
Sbjct: 531 NYLQVKAVVTPLKNPAWL 548
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 1.0 | 0.707 | 0.814 | 1.5e-170 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 1.0 | 0.702 | 0.793 | 6e-167 | |
| RGD|69219 | 519 | Aldh2 "aldehyde dehydrogenase | 0.973 | 0.709 | 0.641 | 3.3e-127 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.973 | 0.706 | 0.641 | 5.3e-127 | |
| MGI|MGI:99600 | 519 | Aldh2 "aldehyde dehydrogenase | 0.973 | 0.709 | 0.641 | 6.8e-127 | |
| UNIPROTKB|H0YM00 | 422 | ALDH1A2 "Retinal dehydrogenase | 0.976 | 0.874 | 0.615 | 1.4e-126 | |
| UNIPROTKB|H0YMG7 | 489 | ALDH1A2 "Retinal dehydrogenase | 0.976 | 0.754 | 0.615 | 1.4e-126 | |
| UNIPROTKB|O94788 | 518 | ALDH1A2 "Retinal dehydrogenase | 0.976 | 0.712 | 0.615 | 1.4e-126 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.973 | 0.707 | 0.627 | 1.8e-126 | |
| UNIPROTKB|F1PBJ8 | 521 | ALDH2 "Uncharacterized protein | 0.973 | 0.706 | 0.641 | 3.7e-126 |
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
Identities = 308/378 (81%), Positives = 344/378 (91%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPAL
Sbjct: 157 MLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPAL 216
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AF
Sbjct: 217 ACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAF 276
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCC
Sbjct: 277 TGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCC 336
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+
Sbjct: 337 AGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEA 396
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S
Sbjct: 397 GATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNS 456
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+
Sbjct: 457 RYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLN 516
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT+LKNPAWL
Sbjct: 517 NYLQVKAVVTSLKNPAWL 534
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
Identities = 300/378 (79%), Positives = 338/378 (89%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYYAGWADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL
Sbjct: 161 MFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 220
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAF
Sbjct: 221 ACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAF 280
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGK++L LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCC
Sbjct: 281 TGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCC 340
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++
Sbjct: 341 AGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIES 400
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
A LE GG+++G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N +
Sbjct: 401 NATLECGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANET 460
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+
Sbjct: 461 KYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLN 520
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQ+KAVVTAL PAW+
Sbjct: 521 NYLQIKAVVTALNKPAWI 538
|
|
| RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1249 (444.7 bits), Expect = 3.3e-127, P = 3.3e-127
Identities = 236/368 (64%), Positives = 279/368 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 143 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 202
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF
Sbjct: 203 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 262
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 263 TGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 322
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG
Sbjct: 323 AGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQE 382
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 383 GAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 442
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L
Sbjct: 443 KYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 502
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 503 AYTEVKTV 510
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 236/368 (64%), Positives = 280/368 (76%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 145 MVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 204
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K +EQTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AF
Sbjct: 205 ATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAF 264
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 265 TGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 324
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG +
Sbjct: 325 AGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEE 384
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S
Sbjct: 385 GAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNS 444
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 445 KYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQ 504
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 505 AYTEVKTV 512
|
|
| MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 236/368 (64%), Positives = 279/368 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 143 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 202
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH VDK+AF
Sbjct: 203 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAF 262
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 263 TGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 322
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E+VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG
Sbjct: 323 AGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQE 382
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 383 GAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDS 442
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L
Sbjct: 443 KYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 502
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 503 AYTEVKTV 510
|
|
| UNIPROTKB|H0YM00 ALDH1A2 "Retinal dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 227/369 (61%), Positives = 285/369 (77%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
+ FRYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PAL CG
Sbjct: 49 KTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCG 108
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+V+K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGS
Sbjct: 109 NTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGS 168
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GK++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGS
Sbjct: 169 TEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGS 228
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R FV ES+Y++FV ++ A +RVVG PF +QGPQID +Q+ KIL+ I+SGV GAK
Sbjct: 229 RIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAK 288
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
LE GG+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +G
Sbjct: 289 LECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFG 348
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
L A VFT++++ A T+ A++ G+VWINC++ +A PFGG+K SG GRE G + L Y
Sbjct: 349 LVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYS 408
Query: 364 QVKAVVTAL 372
+VK V +
Sbjct: 409 EVKTVTVKI 417
|
|
| UNIPROTKB|H0YMG7 ALDH1A2 "Retinal dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 227/369 (61%), Positives = 285/369 (77%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
+ FRYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PAL CG
Sbjct: 116 KTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCG 175
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+V+K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGS
Sbjct: 176 NTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGS 235
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GK++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGS
Sbjct: 236 TEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGS 295
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R FV ES+Y++FV ++ A +RVVG PF +QGPQID +Q+ KIL+ I+SGV GAK
Sbjct: 296 RIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAK 355
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
LE GG+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +G
Sbjct: 356 LECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFG 415
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
L A VFT++++ A T+ A++ G+VWINC++ +A PFGG+K SG GRE G + L Y
Sbjct: 416 LVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYS 475
Query: 364 QVKAVVTAL 372
+VK V +
Sbjct: 476 EVKTVTVKI 484
|
|
| UNIPROTKB|O94788 ALDH1A2 "Retinal dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 227/369 (61%), Positives = 285/369 (77%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
+ FRYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PAL CG
Sbjct: 145 KTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCG 204
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+V+K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGS
Sbjct: 205 NTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGS 264
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GK++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGS
Sbjct: 265 TEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGS 324
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R FV ES+Y++FV ++ A +RVVG PF +QGPQID +Q+ KIL+ I+SGV GAK
Sbjct: 325 RIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAK 384
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
LE GG+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +G
Sbjct: 385 LECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFG 444
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
L A VFT++++ A T+ A++ G+VWINC++ +A PFGG+K SG GRE G + L Y
Sbjct: 445 LVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYS 504
Query: 364 QVKAVVTAL 372
+VK V +
Sbjct: 505 EVKTVTVKI 513
|
|
| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 231/368 (62%), Positives = 280/368 (76%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 144 MVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 203
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AF
Sbjct: 204 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAF 263
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCC
Sbjct: 264 TGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 323
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG +
Sbjct: 324 AGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEE 383
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 384 GAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNS 443
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 444 KYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQ 503
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 504 AYTEVKTV 511
|
|
| UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1239 (441.2 bits), Expect = 3.7e-126, P = 3.7e-126
Identities = 236/368 (64%), Positives = 279/368 (75%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M R RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 145 MVLRCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 204
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN IV+K AEQTPL+ALYV+ L+ EAG PPGV+NI+ G+GPTAGAA+ASH +VDK+AF
Sbjct: 205 ATGNVIVMKVAEQTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASHEDVDKVAF 264
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G +V A SNLK VTLELGGKSP I+ DAD++ A E AH+ALFFNQGQCCC
Sbjct: 265 TGSTEVGHLVQVAAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALFFNQGQCCC 324
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E VY +FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG +
Sbjct: 325 AGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFKKILGYIKSGKEE 384
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S
Sbjct: 385 GAKLLCGGGAAADRGYFIQPTVFGDVQDTMTIAKEEIFGPVMQILKFKTIEEVIGRANNS 444
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L
Sbjct: 445 KYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 504
Query: 361 NYLQVKAV 368
Y +VK V
Sbjct: 505 AYTEVKTV 512
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5564 | 0.9603 | 0.7303 | yes | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.5501 | 0.9735 | 0.7434 | yes | no |
| P47738 | ALDH2_MOUSE | 1, ., 2, ., 1, ., 3 | 0.6344 | 0.9841 | 0.7167 | yes | no |
| O94788 | AL1A2_HUMAN | 1, ., 2, ., 1, ., 3, 6 | 0.6151 | 0.9761 | 0.7123 | yes | no |
| P11884 | ALDH2_RAT | 1, ., 2, ., 1, ., 3 | 0.6344 | 0.9841 | 0.7167 | yes | no |
| Q8S528 | AL2B7_ARATH | 1, ., 2, ., 1, ., 3 | 0.8148 | 1.0 | 0.7078 | yes | no |
| P32872 | ALDHY_YEASX | 1, ., 2, ., 1, ., 3 | 0.5690 | 0.9312 | 0.6888 | yes | no |
| Q5RF00 | ALDH2_PONAB | 1, ., 2, ., 1, ., 3 | 0.6209 | 0.9841 | 0.7195 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5867 | 0.9603 | 0.7303 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5647 | 0.9603 | 0.7216 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.6344 | 0.9841 | 0.7140 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00028844001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00038001001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (622 aa) | • | • | • | • | 0.951 | |||||
| PDC1 | SubName- Full=Chromosome chr8 scaffold_115, whole genome shotgun sequence; (605 aa) | • | • | 0.911 | |||||||
| GSVIVG00024065001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (607 aa) | • | • | 0.910 | |||||||
| GSVIVG00005787001 | SubName- Full=Chromosome chr3 scaffold_158, whole genome shotgun sequence; (360 aa) | • | • | • | 0.902 | ||||||
| GSVIVG00001276001 | SubName- Full=Chromosome undetermined scaffold_114, whole genome shotgun sequence; (290 aa) | • | 0.901 | ||||||||
| GSVIVG00035907001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa) | • | 0.899 | ||||||||
| ADH2 | SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_73, whole genome shotg [...] (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034833001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034832001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034830001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 378 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-175 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-171 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-166 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-164 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-164 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-155 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-153 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-152 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-147 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-147 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-145 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-141 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-141 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-140 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-140 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-137 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-137 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-136 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-135 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-132 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-131 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-131 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-131 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-129 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-127 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-125 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-125 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-124 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-124 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-123 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-121 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-121 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-120 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-114 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-113 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-112 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-111 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-111 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-111 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-111 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-109 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-107 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-106 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-105 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-105 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-104 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-104 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-103 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-102 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-99 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 7e-99 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 7e-99 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 5e-98 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 2e-97 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-96 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 9e-95 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-93 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-91 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-89 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-89 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 6e-89 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 3e-87 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 8e-86 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 7e-80 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 4e-79 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 6e-75 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 6e-73 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-72 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-72 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 5e-72 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-70 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-66 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 2e-66 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-66 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-66 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-64 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 2e-62 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-57 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 2e-56 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 2e-55 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-53 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 5e-53 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 2e-52 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 4e-51 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 5e-51 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-50 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 2e-49 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 8e-47 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-46 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 1e-44 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-44 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 5e-44 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-41 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 1e-40 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-35 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 5e-31 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 6e-26 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-25 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 1e-22 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 8e-21 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-19 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 4e-15 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 5e-15 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 9e-11 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 5e-06 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 1e-04 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 6e-04 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 0.003 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 805 bits (2081), Expect = 0.0
Identities = 327/378 (86%), Positives = 355/378 (93%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M RLFRYYAGWADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL
Sbjct: 161 MFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 220
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLKTAEQTPLSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALASHM+VDKLAF
Sbjct: 221 ACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAF 280
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TGKIVL+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCC
Sbjct: 281 TGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCC 340
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHE VYD+FVEKA A A+KRVVGDPFK G++QGPQIDSEQFEKIL+YI+SGV+
Sbjct: 341 AGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVES 400
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA LE GG+R G+KGYYI+PTVF+ V+DDMLIA+DEIFGPVQSILK+KDLDEVI+R+N +
Sbjct: 401 GATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNT 460
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVFT NLDTANTL RALRVG+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+
Sbjct: 461 RYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLN 520
Query: 361 NYLQVKAVVTALKNPAWL 378
NYLQVKAVVT LKNPAWL
Sbjct: 521 NYLQVKAVVTPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 725 bits (1872), Expect = 0.0
Identities = 292/370 (78%), Positives = 333/370 (90%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ RLFRYYAGWADKI G+T PADGP+HV TLHEPIGV GQIIPWNFPLLMFAWKVGPAL
Sbjct: 107 LAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPAL 166
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNTIVLK AEQTPLSAL +KL EAGLP GVLNIV+G+GPTAGAA+ASHM+VDK+AF
Sbjct: 167 ACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAF 226
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST GKI++QLAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCC
Sbjct: 227 TGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCC 286
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFVHES+YD+FVEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKIL YI G +
Sbjct: 287 AGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEE 346
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA L TGG+R+G+KGYYI+PT+F+ VKDDM IA+DEIFGPVQSILK+K +DEVI+R+N S
Sbjct: 347 GATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNS 406
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAGVF+ N+DTANTL RAL+ G+VW+NC+DVFDA+IPFGGYK SG GREKG Y+L+
Sbjct: 407 KYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALN 466
Query: 361 NYLQVKAVVT 370
NYLQVKAVV
Sbjct: 467 NYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 668 bits (1726), Expect = 0.0
Identities = 245/364 (67%), Positives = 291/364 (79%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RYYAGWADKIQG T P DG + T EPIGV GQIIPWNFPLLM AWK+ PALA GNT
Sbjct: 112 LRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNT 171
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK AEQTPLSALY+++L+ EAG PPGV+NIV G+GPTAGAA++SHM+VDK+AFTGST
Sbjct: 172 VVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTA 231
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
G+ +++ AAKSNLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR
Sbjct: 232 VGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI 291
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
FV ES+YD+FVEK A A KRVVGDPF QGPQ+ QF+KIL YI SG GA L
Sbjct: 292 FVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLL 351
Query: 246 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 305
TGGER G+KGY+I+PTVFT VKDDM IAK+EIFGPV +ILK+K DEVI+R+N ++YGLA
Sbjct: 352 TGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLA 411
Query: 306 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 365
AGVFT +++ A + RAL+ G+VW+N ++VFDAA+PFGG+KQSG GRE G L Y QV
Sbjct: 412 AGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQV 471
Query: 366 KAVV 369
KAV
Sbjct: 472 KAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 639 bits (1651), Expect = 0.0
Identities = 238/369 (64%), Positives = 284/369 (76%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
++ RYYAGWADKI G T P DG + T HEP+GV GQIIPWNFPLLM AWK+ PAL
Sbjct: 111 GAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPAL 170
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGNT+VLK AEQTPL+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++SH ++DK+AF
Sbjct: 171 ACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAF 230
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST GK++ Q A KSNLK VTLELGGKSP IV DAD+D A E AH ALFFN GQCCC
Sbjct: 231 TGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCC 290
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV ES+YD+FV+++ A KRVVG+PF +QGPQID EQF+KIL+ I SG
Sbjct: 291 AGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKE 350
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKLE GG+R G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I K+K +DEVI+R+N +
Sbjct: 351 GAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNT 410
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAA VFT ++D A T ALR G+VW+NC++V PFGGYK SG GRE G Y L
Sbjct: 411 TYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQ 470
Query: 361 NYLQVKAVV 369
Y +VK V
Sbjct: 471 EYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 542 bits (1400), Expect = 0.0
Identities = 193/364 (53%), Positives = 244/364 (67%), Gaps = 2/364 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RYYAG A K++G T P+D T EP+GV G I PWNFPLL+ AWK+ PALA GNT
Sbjct: 97 LRYYAGLARKLEGETLPSDPGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNT 156
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK +E TPL+AL +++L EAGLPPGVLN+V+G G G AL H +VDK++FTGST
Sbjct: 157 VVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTE 216
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
G+ + + AAK NLK VTLELGGK+P IV +DAD+D A E A + F N GQ C AGSR
Sbjct: 217 VGRRIAKAAAK-NLKRVTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRL 275
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
VHES+YD+FVE+ A VGDP GP I +Q E++L YI + GAKL
Sbjct: 276 LVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLL 335
Query: 246 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 305
GGE KGY+++PTV V DM IA++EIFGPV S++ +KD DE I+ +N ++YGLA
Sbjct: 336 CGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLA 395
Query: 306 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQ 364
AGVFT++L+ A + R L G VWIN + D A+PFGG+KQSG GRE G L Y +
Sbjct: 396 AGVFTNDLERALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTE 455
Query: 365 VKAV 368
K V
Sbjct: 456 TKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 214/378 (56%), Positives = 274/378 (72%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
L RYYAG ADKI G T TL EPIGV G IIPWNFP MF KV PAL
Sbjct: 124 AAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPAL 183
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A G T+V+K AEQTPLSAL+ + L AG+P GV+N+V+G+GPTAGAA+ASHM+VDK++F
Sbjct: 184 AAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSF 243
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+ ++Q AA SNLK V+LELGGKSP ++ +DADVD A +LA +F+N+G+ C
Sbjct: 244 TGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICV 303
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
A SR +V E +YD+FV+K A VVGDPF +QGPQ+D +QFEKIL YI G
Sbjct: 304 ASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKRE 363
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA L TGG+ G KGYYI+PT+FT V +DM IA+DEIFGPV S++K+K ++E I+++N +
Sbjct: 364 GATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNT 423
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAG+ T +LD ANT+ R++R G++W+NC+ FD PFGGYK SG GR++G +L
Sbjct: 424 KYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALD 483
Query: 361 NYLQVKAVVTALKNPAWL 378
YLQVK+VVT L N WL
Sbjct: 484 KYLQVKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 522 bits (1347), Expect = 0.0
Identities = 214/365 (58%), Positives = 270/365 (73%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
FRYY GWADKI G D T HEPIGV GQIIPWNFPLLM AWK+ PALA G
Sbjct: 113 DTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAG 172
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NTIVLK +E TPLSALY++KL+ EAG PPGV+N+VSGYG T G A++SHM++DK+AFTGS
Sbjct: 173 NTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGS 232
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T G+ V++ AAKSNLK VTLELGGKSP IV +DAD++ A Y +FFN GQ CCAGS
Sbjct: 233 TLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGS 292
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R +V E +YD+FV++ A K VGDPF QGPQ+ Q+E+I+ YI SG GA
Sbjct: 293 RIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGAT 352
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
+ETGG+R G +GY+I+PT+FT V +DM I K+EIFGPV +++K+K +E I+R+N S YG
Sbjct: 353 VETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYG 412
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
LAA VFT+N++ A + AL+ G+VW+NC+++ +PFGGYKQSG GRE G Y+L NY
Sbjct: 413 LAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYT 472
Query: 364 QVKAV 368
Q+KAV
Sbjct: 473 QIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 515 bits (1329), Expect = 0.0
Identities = 191/370 (51%), Positives = 245/370 (66%), Gaps = 4/370 (1%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 62
FRYYAG A ++ G P+ P + EP+GV G I PWNFPLL+ AWK+ PALA
Sbjct: 64 DTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAA 123
Query: 63 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 122
GNT+VLK +E TPL+AL +++LL EAGLPPGVLN+V+G G GAALASH VDK++FTG
Sbjct: 124 GNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTG 183
Query: 123 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182
ST GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A + F N GQ C A
Sbjct: 184 STAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAA 242
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242
SR VHES+YD+FVE+ VG+P GP I + Q +++L YI GA
Sbjct: 243 SRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302
Query: 243 KLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
KL GG+RL G KGY++ PTV T V DM IA++EIFGPV ++ +KD +E I+ +N ++
Sbjct: 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTE 362
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLS 360
YGLAAGVFT +L+ A + L G+VWIN + V + + PFGG KQSG GRE G Y L
Sbjct: 363 YGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLE 422
Query: 361 NYLQVKAVVT 370
Y + K V
Sbjct: 423 EYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 497 bits (1281), Expect = e-175
Identities = 199/368 (54%), Positives = 247/368 (67%), Gaps = 5/368 (1%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
+ RYYAGWADKIQG T P TLHEP GV GQIIPWN+PL M AWK+ PALA GN
Sbjct: 114 VIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGN 173
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+V+K AE TPLS LY + L+ EAG PPGV+NI+ GYG AG+ALA H +VDK+AFTGST
Sbjct: 174 TVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGST 233
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TG++V++ AA NLK VTLE GGKSP +V EDAD+D+A + A + +N GQ C A SR
Sbjct: 234 ATGRLVMKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSR 292
Query: 185 TFVHESVYDQFVEKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
+V ES+YD+FVEK + VG PF GPQ+ Q++++L YI G GAK
Sbjct: 293 IYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK 352
Query: 244 LETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
L GGE+ KGY+I PT+FT V DM I K+EIFGPV I K+K +E I+++N +
Sbjct: 353 LVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDT 412
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAA VFT ++ A+ + R L G VWIN + D +PFGG+K SG GRE G Y L
Sbjct: 413 TYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLE 472
Query: 361 NYLQVKAV 368
Y Q KAV
Sbjct: 473 TYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 484 bits (1249), Expect = e-171
Identities = 186/372 (50%), Positives = 245/372 (65%), Gaps = 7/372 (1%)
Query: 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPA 59
FR+YA DK+ G AP L EP+GV G ++PWNFPLLM AWK+ PA
Sbjct: 91 AANTFRWYAEAIDKVYGEVAPT--GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPA 148
Query: 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
LA GN++VLK AEQ+PL+AL +++L EAGLP GVLN+V G+G TAG AL HM+VD LA
Sbjct: 149 LAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALA 208
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQC 178
FTGST G+ L+ + +SNLK V LE GGKSP IV DA D+D AAE A +F+NQG+
Sbjct: 209 FTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEV 268
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C AGSR VHES+ D+F+EK A A + GDP + G + F+K+L YI SG
Sbjct: 269 CSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGK 328
Query: 239 DGGAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296
GA+L GG+R+ G++++PTVF GV DM IA++EIFGPV S++ + +E +
Sbjct: 329 AEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVAL 388
Query: 297 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 356
+N S YGLAA V+T +L A+ + R LR G+VW+NCFD D PFGG+KQSG GR+K
Sbjct: 389 ANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSL 448
Query: 357 YSLSNYLQVKAV 368
++L Y ++K
Sbjct: 449 HALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 471 bits (1214), Expect = e-166
Identities = 177/369 (47%), Positives = 234/369 (63%), Gaps = 6/369 (1%)
Query: 6 FRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
+RYYAG ADKI+G P D G Y T EP+GV I PWN PLL+ A K+ PALA GN
Sbjct: 89 YRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGN 148
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK +E TP S L ++KL EAG PPGV+N+V+G+GP G AL H V K+AFTG T
Sbjct: 149 TVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGT 208
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TG+ + + AA+ NL PVTLELGGKSP IV +DAD+D A +F GQ C AGSR
Sbjct: 209 ETGRHIARAAAE-NLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSR 267
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
V S+YD+FVE+ A A VGDP Q GP Q EK+ +Y+ + GA++
Sbjct: 268 LLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARV 327
Query: 245 ETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
TGGER GY+ +PT+ V +DM IA++E+FGPV S++ + D +E I +N S
Sbjct: 328 LTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDS 387
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
+YGLAAG++T +L A+ + RA+ G+VW+N + + PFGG+K SG GRE G ++
Sbjct: 388 EYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIR 447
Query: 361 NYLQVKAVV 369
Y Q K+V
Sbjct: 448 EYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 468 bits (1205), Expect = e-164
Identities = 194/367 (52%), Positives = 261/367 (71%), Gaps = 1/367 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
FRYYAGWADKI+G P GP+ T+ EP+GV G I+PWNFPL+ AWKV PALA GNT
Sbjct: 88 FRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNT 147
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK AE TPLSAL +++L+ EAG P GVLN+V+G+G AGAAL H +VDK+ FTGST
Sbjct: 148 VVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTA 207
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
G+ ++Q A NLK V+LELGGKS IV DAD+D A A +F+NQGQ C AGSR
Sbjct: 208 VGRKIMQ-GAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRL 266
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
VHES+YD+F+E+ +LA GDP Q GP + QF+++L Y+ G + GA+L
Sbjct: 267 LVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLL 326
Query: 246 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 305
TGG+R GA+G++++PT+F V +M IA++EIFGPV S+++++D +E ++ +N ++YGLA
Sbjct: 327 TGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLA 386
Query: 306 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 365
AGV+T +L A+ + AL+ G+VWIN ++ FD PFGGYKQSG GRE G +L Y +V
Sbjct: 387 AGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEV 446
Query: 366 KAVVTAL 372
K+V L
Sbjct: 447 KSVWVNL 453
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 468 bits (1207), Expect = e-164
Identities = 186/367 (50%), Positives = 236/367 (64%), Gaps = 5/367 (1%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
RYYA A +++G T P D EP+GV G I PWNFPL + AWK+ PALA G
Sbjct: 102 DFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAG 161
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+VLK +EQTPLSAL +++L EAGLP GVLN+V+G G G AL +H +VD ++FTGS
Sbjct: 162 NTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGS 221
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T G+ + AA NLKPVTLELGGKSP IV EDAD+D A + A + FFN GQ C A S
Sbjct: 222 TAVGRAIAAAAAA-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAAS 280
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R VHESVYD+FVE+ A A VGDP GP I EQ +++ YI V GA+
Sbjct: 281 RLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGAR 340
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
L GG+R G GY+++PT+ GV DM IA++EIFGPV ++++KD +E I+ +N ++YG
Sbjct: 341 LLAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYG 398
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSN 361
LAA +FT +L A + R L G V IN A +PFGG KQSG GRE G Y L
Sbjct: 399 LAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEE 458
Query: 362 YLQVKAV 368
+ +VK V
Sbjct: 459 FTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 445 bits (1148), Expect = e-155
Identities = 168/372 (45%), Positives = 233/372 (62%), Gaps = 5/372 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
FRYYAG A K G +T+ EP+GV G I PWN+PLL AWK+ PALA GNT
Sbjct: 105 FRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNT 164
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+V+K +E TPL+ + + +L+ EAGLP GV+N+V+G G T GA LA +VD ++FTG T
Sbjct: 165 VVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTA 224
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
TG+ +++ AA N+K V LELGGK+P IV DAD + A + A +FFN GQ C AGSR
Sbjct: 225 TGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRL 283
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
V ES++D+FV A K +G+ + GP + +E EK+L YI+ G + GA+L
Sbjct: 284 LVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLV 343
Query: 246 TGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
GG+R AKGY+++PT+F V M I ++EIFGPV ++ ++ +E I+ +N +
Sbjct: 344 CGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTP 403
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSN 361
YGLA V+T ++ AN + R LR G+VWIN + + A P+GGYKQSG GRE G L
Sbjct: 404 YGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEE 463
Query: 362 YLQVKAVVTALK 373
Y + K + L
Sbjct: 464 YQETKHININLS 475
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 440 bits (1134), Expect = e-153
Identities = 173/367 (47%), Positives = 242/367 (65%), Gaps = 5/367 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
FR++A + ++ G + P DG L +P+GVAG I PWN PL++ WK+ PALA GNT
Sbjct: 88 FRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNT 147
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK +E TPL+A +++L +EAGLPPGV+N+V G+GP AGAAL +H +VD ++FTG T
Sbjct: 148 VVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETA 207
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
TG+ +++ AA NLKPV+LELGGK+P IV DAD+D+A + A + F N G+ C AGSR
Sbjct: 208 TGRTIMRAAAP-NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRI 266
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
V S+YD+F+E+ A VGDP + GP I E EK+L Y+ GA +
Sbjct: 267 LVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATIL 326
Query: 246 TGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
TGG R GY+++PTV TG+ +D +A++EIFGPV +++ + D +E I+ +N +
Sbjct: 327 TGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTP 386
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSN 361
YGLAA V+T +L A+ + R L G+VW+NC+ V D PFGG K SG GRE G YSL
Sbjct: 387 YGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEF 446
Query: 362 YLQVKAV 368
Y ++K V
Sbjct: 447 YTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 437 bits (1127), Expect = e-152
Identities = 172/364 (47%), Positives = 223/364 (61%), Gaps = 2/364 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
++A A +I G T P+ P + + +P+GV I PWNFP M K+ PALA G
Sbjct: 87 LEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGC 146
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK AE+TPLSAL +++L EAGLP GVLN+V+G G AL + V K++FTGST
Sbjct: 147 TVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGST 206
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
GK+++ AA +K V+LELGG +PFIV +DAD+DKA + A + F N GQ C +R
Sbjct: 207 AVGKLLMAQAA-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANR 265
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
+VHES+YD+FVEK K VG+ G GP I+ EK+ + V GAK+
Sbjct: 266 IYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKV 325
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
TGG+RLG GY+ +PTV T V DDMLI +E FGPV I+ + DEVI R+N + YGL
Sbjct: 326 LTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGL 385
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
AA VFT +L A + AL G V IN + DA PFGG K+SG GRE G L YL+
Sbjct: 386 AAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLE 445
Query: 365 VKAV 368
K V
Sbjct: 446 TKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 425 bits (1095), Expect = e-147
Identities = 164/342 (47%), Positives = 215/342 (62%), Gaps = 7/342 (2%)
Query: 32 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 91
+ EPIGV G I PWN+PL KV PALA G T+VLK +E PLSA+ ++++L EAGLP
Sbjct: 127 VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLP 186
Query: 92 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 151
GV N+V+G GP G AL++H +VD ++FTGST GK V + AA + +K V LELGGKS
Sbjct: 187 AGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-VKRVALELGGKSA 245
Query: 152 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 211
I+ +DAD++KA A F N GQ C A +R V S Y + E A A A VVGDP
Sbjct: 246 NIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDP 305
Query: 212 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKGYYIKPTVFTGVK 267
GP + QF+++ YI+ G++ GA+L GG E L +GY++KPTVF V
Sbjct: 306 RDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERGYFVKPTVFADVT 364
Query: 268 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 327
DM IA++EIFGPV SI+ Y D DE I +N + YGLA V++ + + A + R LR G
Sbjct: 365 PDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQ 424
Query: 328 VWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
V IN F+ PFGGYKQSG GRE G Y L +L+VK++
Sbjct: 425 VHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 424 bits (1093), Expect = e-147
Identities = 176/370 (47%), Positives = 235/370 (63%), Gaps = 11/370 (2%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
FRY+AG +G + D HEP+GV GQIIPWNFPLLM AWK+ PALA GNT
Sbjct: 107 FRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNT 166
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK A QTPLS L + +L+ + LP GV+N+V+G+G AG LASH + KLAFTGSTT
Sbjct: 167 VVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTT 225
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCC 180
G++++Q AA+ NL PVTLELGGKSP I +DA D D AE FNQG+ C
Sbjct: 226 VGRLIMQYAAE-NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCT 284
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
SR V ES+YD+F+E+A VG+P G Q+ +Q EKIL Y+ G +
Sbjct: 285 CPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEE 344
Query: 241 GAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296
GA++ TGGERL KGY+ +PT+ G +DM I ++EIFGPV +++ +KD +E I
Sbjct: 345 GAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAI 404
Query: 297 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 356
+N ++YGL GV+T +++ A + R ++ G VW+NC+ + A PFGGYK+SG GRE
Sbjct: 405 ANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHK 464
Query: 357 YSLSNYLQVK 366
L +Y Q K
Sbjct: 465 MMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 420 bits (1081), Expect = e-145
Identities = 165/372 (44%), Positives = 222/372 (59%), Gaps = 10/372 (2%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
R F YY G ADK+ G T P Y V T+ EP GV G IIPWN+PL + V PALA G
Sbjct: 86 RYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAG 145
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
N +V+K AE PL+AL +++L EAGLP G LN+V+G G AGAAL +H VD ++FTGS
Sbjct: 146 NAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGS 205
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
TG V++ AA+ N+ PVTLELGGKSP IV DAD++ A + A+ N GQ C AGS
Sbjct: 206 VETGIAVMRAAAE-NVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGS 264
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R VH S+YD+ +E+ VG P GP I ++Q +++ ++ GA+
Sbjct: 265 RLLVHRSIYDEVLERLVERFRALRVG-PGLEDPDLGPLISAKQLDRVEGFVARARARGAR 323
Query: 244 LETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
+ GG A GY++ PT+ V D +A++EIFGPV +++ + D E I +N +
Sbjct: 324 IVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGT 383
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA---IPFGGYKQSGQGREKGSY 357
YGL AGV+T + D A + R LR G V++N + +PFGG K+SG GREKG
Sbjct: 384 DYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY--GAGGGIELPFGGVKKSGHGREKGLE 441
Query: 358 SLSNYLQVKAVV 369
+L NY Q K V
Sbjct: 442 ALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 411 bits (1058), Expect = e-141
Identities = 168/365 (46%), Positives = 225/365 (61%), Gaps = 6/365 (1%)
Query: 8 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 67
YYAG A ++G P G V T EP+GV I WN+P+ + WK PALA GN ++
Sbjct: 115 YYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMI 174
Query: 68 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 127
K +E TPL+AL ++++ EAGLP GV N+V G G GA L H ++ K++FTG TG
Sbjct: 175 FKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTG 233
Query: 128 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 187
K V+ AA S LK VT+ELGGKSP IV +DAD+D+AA++A A F++ GQ C G+R FV
Sbjct: 234 KKVMAAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFV 292
Query: 188 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 247
+S+ F + + +GDP GP + +K+L YI G GA+L G
Sbjct: 293 QKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCG 352
Query: 248 GERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
GERL A G ++ PTVFT DDM I ++EIFGPV S+L + D DEVI R+N ++YG
Sbjct: 353 GERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYG 412
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
LAAGVFT +L A+ ++ L G WIN + A +P GGYKQSG GRE G +L +Y
Sbjct: 413 LAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYT 472
Query: 364 QVKAV 368
Q+K+V
Sbjct: 473 QIKSV 477
|
Length = 488 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 407 bits (1049), Expect = e-141
Identities = 177/371 (47%), Positives = 235/371 (63%), Gaps = 7/371 (1%)
Query: 6 FRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 61
F YYA A+++ A + + EP+GV G I PWNFPLLM AWKV PALA
Sbjct: 87 FEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALA 146
Query: 62 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
G T+VLK +E T L+ L ++++ EAGLPPGVLN+V+G G AGA LA+H +DK++FT
Sbjct: 147 AGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFT 206
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
GST TG V+Q AA+ ++KPV+LELGGKSP IV +DAD++KA E A + F+N GQ C A
Sbjct: 207 GSTATGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSA 265
Query: 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241
SR VHES+ D F+E+ A VGDP + G++ GP + Q+EK+L +I G + G
Sbjct: 266 TSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEG 325
Query: 242 AKLETGGER--LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
A+L GG R KGY+I PTVF V D I ++EIFGPV + + DE I +N
Sbjct: 326 ARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALAND 385
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 359
S+YGLAA V + + + + + AL G VWINC P+GGYK+SG GRE G + L
Sbjct: 386 SEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGL 445
Query: 360 SNYLQVKAVVT 370
NYL+VK +
Sbjct: 446 DNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 402 bits (1036), Expect = e-140
Identities = 168/366 (45%), Positives = 208/366 (56%), Gaps = 63/366 (17%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
FRY AG ADK+ G P+ P EP+GV G I PWNFPLL+ AWK+ PALA GN
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK +E TPL+AL +++LL EAGLPPGV+N+V G G GAAL SH VDK++FTGST
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A + FFN GQ C A SR
Sbjct: 182 AVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASR 240
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
VHES+Y D F
Sbjct: 241 LLVHESIY-----------------DEFV------------------------------- 252
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
E+L TV V DM IA++EIFGPV ++++KD +E I +N ++YGL
Sbjct: 253 ----EKLV--------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGL 300
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYL 363
AGVFT +L+ A + LR G+V+IN + PFGG K SG GRE G Y L Y
Sbjct: 301 TAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYT 360
Query: 364 QVKAVV 369
+ K VV
Sbjct: 361 RTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 405 bits (1044), Expect = e-140
Identities = 171/368 (46%), Positives = 226/368 (61%), Gaps = 7/368 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
YYAG A + G P G T EP+GV I WN+P+ + +WK PALACGN
Sbjct: 87 LEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNA 146
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+V K + TPL+AL ++++L EAGLP GV N+V G G T G L H +V K++FTGS
Sbjct: 147 MVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGGET-GQLLCEHPDVAKVSFTGSVP 205
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
TGK V+ AAK +K VTLELGGKSP I+ +DAD++ A A A F +QGQ C G+R
Sbjct: 206 TGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRV 264
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
FV S+ D+F E+ K +GDP Q G I E EK+L YI S GAK+
Sbjct: 265 FVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVL 324
Query: 246 TGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GGER+ G+Y+ P V T DDM I ++EIFGPV SIL + +EVI+R+N +
Sbjct: 325 CGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDT 384
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAAGVFT +L A+ ++ L+ G+ WIN +++ +PFGGYKQSG GRE G+ +L
Sbjct: 385 TYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALE 444
Query: 361 NYLQVKAV 368
+Y Q+K V
Sbjct: 445 HYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-137
Identities = 162/371 (43%), Positives = 214/371 (57%), Gaps = 8/371 (2%)
Query: 6 FRYYAGWADKI---QGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
RY+A AD L PA GP EP+GV I PWNFP + K+ PAL
Sbjct: 89 LRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPAL 148
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GNT+VLK A TPLSAL + +++ E LP GV+N+V+G G AL + VD ++F
Sbjct: 149 AAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSF 208
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+ ++ AA + LK V LELGGKS IV +DAD+ AA A N GQ C
Sbjct: 209 TGSTAVGRRIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCA 267
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
+R V S YD+ VE A VGDP G GP I + Q +++ YI G D
Sbjct: 268 LTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDE 327
Query: 241 GAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
GA+L TGG R KG+Y++PT+F V +DM IA++EIFGPV ++ Y D DE ++ +N
Sbjct: 328 GARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIAN 387
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 358
S YGL+ GV++ ++D A + R +R GSV IN + PFGGYKQSG GRE G
Sbjct: 388 DSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEG 447
Query: 359 LSNYLQVKAVV 369
L +L+ K++
Sbjct: 448 LEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 399 bits (1026), Expect = e-137
Identities = 174/374 (46%), Positives = 243/374 (64%), Gaps = 6/374 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKV 56
M+ + FRY+AGW DKIQG T P + P TL EPIGV G +IPWN+PL+M AWK+
Sbjct: 109 MSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKM 168
Query: 57 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 116
LA GNT+VLK A+ TPL+AL ++L +AG P GV+NI+ G G G L+ H +V
Sbjct: 169 AACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVR 228
Query: 117 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176
KL FTGST GK +++ A SNLK V+LELGGKSP I+ D D+DKA + ++FFN+G
Sbjct: 229 KLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKG 288
Query: 177 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236
+ C A R FV ES++D+FV + K +GDP GPQ +K+++Y
Sbjct: 289 ENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCER 348
Query: 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVI 294
GV GA L GG+++ G++ +PTVFT V+D M IAK+E FGP+ I K+ D+D V+
Sbjct: 349 GVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVL 408
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
QR+N ++YGLA+GVFT +++ A + L G+V++N ++ D A PFGG+KQSG G++
Sbjct: 409 QRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 468
Query: 355 GSYSLSNYLQVKAV 368
G +L+ YL+ K V
Sbjct: 469 GEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-136
Identities = 173/366 (47%), Positives = 234/366 (63%), Gaps = 3/366 (0%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
L+RY A A + G + G + L EPIGV G I PWNFP L+ + K+ ALA G
Sbjct: 88 LWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAG 147
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
T+V+K +E T + L +++LL EAGLP GV+NIV+GYG T G A+ H +VD ++FTGS
Sbjct: 148 CTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGS 207
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GK + AA+ NLK V+LELGGK+P IV DAD+D AA+ + ++FN G+CC +GS
Sbjct: 208 TRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGS 266
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R VHES+ D FV A + K VGDP + G I+ Q KI Y+ +G GA
Sbjct: 267 RLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGAT 326
Query: 244 LETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
L GGERL A G + +PT+FT V DM IA++EIFGPV S+L + +DE I +N + Y
Sbjct: 327 LLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVY 386
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 362
GL+AGV++ ++DTA T+ R +R G+VW+N F +PFGG+KQSG GRE G Y + Y
Sbjct: 387 GLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEY 446
Query: 363 LQVKAV 368
++K V
Sbjct: 447 TELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 394 bits (1013), Expect = e-135
Identities = 177/371 (47%), Positives = 233/371 (62%), Gaps = 6/371 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
FRY+AG +G D L EPIGV GQIIPWNFP LM AWK+ PALA GNT
Sbjct: 107 FRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNT 166
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+V+K + T LS L ++K++ + LP GV+NIV+G G +G L +H +DKLAFTGST
Sbjct: 167 VVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTE 225
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
G+ V AAK L P TLELGGKS I+ +DA+ DKA E A + FNQGQ CCAGSR
Sbjct: 226 VGRDVAIAAAK-KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRI 284
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
FV E +YD+FV K VG+P Q G Q++ +Q +KIL Y+ + GAK+
Sbjct: 285 FVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKIL 344
Query: 246 TGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
TGG RL KG++I+PT+ V +DM +A++EIFGPV +++K+K DEVI +N S+
Sbjct: 345 TGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSE 404
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSN 361
YGL GVFT +++ A + RA+ G VW+N ++ A PFGGYK+SG GRE L
Sbjct: 405 YGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDA 464
Query: 362 YLQVKAVVTAL 372
Y Q+K + L
Sbjct: 465 YTQMKNIYIDL 475
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 385 bits (991), Expect = e-132
Identities = 160/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 2 TTRLFRYYAGWADKIQGLTAPADGPY-HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
T Y A WA +I+G P+D P ++ PIGV I+PWNFP + A K+ PAL
Sbjct: 99 TADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPAL 158
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
GNTIV+K +E+TPL+AL ++L+ EAGLP GVLNIV+G G G AL +H +V ++
Sbjct: 159 VTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISL 218
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+ +++ AA+ N+ V+LELGGK+P IV +DAD+D A + + N GQ C
Sbjct: 219 TGSTEAGQKIMEAAAE-NITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCT 277
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
R +VHE +YD+F+EK VGDPF GP ++ +K+ + + V+
Sbjct: 278 CAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEA 337
Query: 241 GAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
GA L TGG+R G KGY+ +PTV T V+ DM I ++EIFGPV ++K+ LDE I+ +N
Sbjct: 338 GATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAND 397
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYS 358
S+YGL + ++T NL+TA L G +IN + F+A F G+K+SG G G +
Sbjct: 398 SEYGLTSYIYTENLNTAMRATNELEFGETYINREN-FEAMQGFHAGWKKSGLGGADGKHG 456
Query: 359 LSNYLQVKAVV 369
L YLQ K V
Sbjct: 457 LEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 385 bits (990), Expect = e-131
Identities = 165/372 (44%), Positives = 223/372 (59%), Gaps = 6/372 (1%)
Query: 2 TTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
++FRYYAG A ++ G T P+ P V+T EP+GV G I PWNFP+ + AWK+ PAL
Sbjct: 101 AGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPAL 160
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GNT+V K AE TP SA + ++L EAGLP GV N+V G G G AL H +VD ++F
Sbjct: 161 AYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSF 220
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+ + AA + V LE+GGK+P +V +DAD+D A E A FF+ GQ C
Sbjct: 221 TGSTAVGRRIAAAAA-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCT 279
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
A SR V E ++D+FVE VGD G+ GP + Q EK L+YI
Sbjct: 280 ASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSE 339
Query: 241 GAKLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
GAKL GGERL +GYY+ P +F GV +DM IA++EIFGPV ++++ +D DE + +N
Sbjct: 340 GAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIAN 399
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGS 356
+++GL+AG+ T +L A R + G V +N D +PFGG K S G RE+G
Sbjct: 400 DTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGE 459
Query: 357 YSLSNYLQVKAV 368
+L Y +K V
Sbjct: 460 AALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 384 bits (988), Expect = e-131
Identities = 164/365 (44%), Positives = 231/365 (63%), Gaps = 5/365 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
F ++AG A + G P GP T+ EP+GV I WN+PL + +WK+ PALA GN
Sbjct: 104 FEFFAGLAPALNGEIIPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNA 163
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+V K +E TPL+AL V++++ EAGLP GV N+V G G G L +H +V K++FTG
Sbjct: 164 MVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVP 223
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
TGK ++ AA +LK VT+ELGGKSP IV +DAD++ A + A FF+ GQ C G+R
Sbjct: 224 TGKKIMA-AAAGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRV 282
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
FVH+ + ++F+ + + +GDPF + GP I + +K+L YI G GA L
Sbjct: 283 FVHKKIKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLA 342
Query: 246 TGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
TGG R G++++PTVF DDM I ++EIFGPV ++L + D DEVI R+N ++
Sbjct: 343 TGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTE 402
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSN 361
YGLA GVFT +L A+ + L G+VWIN ++++ A PFGGYKQSG GRE G +L++
Sbjct: 403 YGLAGGVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAH 462
Query: 362 YLQVK 366
Y +VK
Sbjct: 463 YTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 382 bits (983), Expect = e-131
Identities = 159/366 (43%), Positives = 220/366 (60%), Gaps = 4/366 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
FR++AG A ++G A P H + EPIGV QI PWN+PL+M AWK+ PALA GN
Sbjct: 88 FRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGN 147
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK +E TPL+ L +++L E LPPGV+N+V G G +AG AL +H V ++ TGS
Sbjct: 148 TVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSV 206
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TGK V + AA LK V LELGGK+P IV +DAD+D A A ++N GQ C A R
Sbjct: 207 RTGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACR 265
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
+VHESVYD+FV VGDP + GP + Q E++ ++ A++
Sbjct: 266 VYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARV 324
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
TGG R GY+ +PTV GV D I ++EIFGPV ++ + D DE I+ +N +YGL
Sbjct: 325 LTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGL 384
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
A+ V+T ++ A L L G+VW+N A +P GG+KQSG G++ Y+L +Y +
Sbjct: 385 ASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTR 444
Query: 365 VKAVVT 370
+K V+
Sbjct: 445 IKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 379 bits (976), Expect = e-129
Identities = 168/378 (44%), Positives = 227/378 (60%), Gaps = 7/378 (1%)
Query: 6 FRYYAGWADKIQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 61
F YYA A+ + AP P + L EP+GV G I PWN+PLLM WKV PALA
Sbjct: 118 FEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALA 177
Query: 62 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
G T VLK +E ++ L ++ + E GLPPGVLN+V+G G AGA LASH VDK+AFT
Sbjct: 178 AGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFT 237
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
GST TG+ ++ AA+ +KPV+LELGGKSP IV +D D+DKA E A + F+ GQ C A
Sbjct: 238 GSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSA 296
Query: 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241
SR VHE + +F+EK A + DP + G + GP + Q+EK+LK+I + G
Sbjct: 297 TSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEG 356
Query: 242 AKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
A + GG+R KG++I+PT+ T V M I ++E+FGPV + + DE I+ +N
Sbjct: 357 ATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELAND 416
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 359
S YGLA V +++L+ + A + G VWINC P+GG K+SG GRE G + L
Sbjct: 417 SHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGL 476
Query: 360 SNYLQVKAVVTALKNPAW 377
NYL VK V + + W
Sbjct: 477 ENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 373 bits (960), Expect = e-127
Identities = 165/366 (45%), Positives = 210/366 (57%), Gaps = 11/366 (3%)
Query: 6 FRYYAGWA--DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
RY A D++ V+ +P+GV I+PWNFPLL+ AWK+ PAL G
Sbjct: 87 LRYTASLDLPDEVIEDDDTR----RVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAG 142
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+VLK + TPL L + +L E LPPGVLN+VSG G G AL SH ++ K++FTGS
Sbjct: 143 NTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGS 200
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE-LAHYALFFNQGQCCCAG 182
T TGK V+ AAK LK VTLELGG IV D D+D A L A F N GQ C A
Sbjct: 201 TATGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGA-FINSGQVCAAI 258
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242
R +VHES+YD+F E ALA VVGD G GP + Q++K+ + + GA
Sbjct: 259 KRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGA 318
Query: 243 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
K+ GGE L GY+I PT+ + I +E FGPV +LKY D DEVI R+N S+Y
Sbjct: 319 KVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEY 378
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 362
GL A V++ +L+ A + R L G+VWIN D PFGG+KQSG G E G L Y
Sbjct: 379 GLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEY 438
Query: 363 LQVKAV 368
Q + +
Sbjct: 439 TQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 368 bits (946), Expect = e-125
Identities = 152/368 (41%), Positives = 211/368 (57%), Gaps = 7/368 (1%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 62
+ R AG + +G P+D P P+GV G I P+NFPL++ V PALA
Sbjct: 66 AILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALAL 125
Query: 63 GNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
GN +VLK +TP++ L ++++ EAGLP GVLN+V G G G AL H V ++FT
Sbjct: 126 GNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFT 185
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
GST G+ + +LA + +LK V LELGG +P IV +DAD+D A A + F +QGQ C A
Sbjct: 186 GSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMA 244
Query: 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241
R VHESVYD+FVEK A A VGDP GP I+ Q +++ + V G
Sbjct: 245 AGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAG 304
Query: 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
A+L TGG +G + +PTV + V DM I ++EIFGPV ++ + D +E ++ +N ++
Sbjct: 305 ARLLTGGT---YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTE 361
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLS 360
YGL+A VFT +L+ A L G V IN V D +PFGG K SG GR G SL
Sbjct: 362 YGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLE 421
Query: 361 NYLQVKAV 368
+ + + +
Sbjct: 422 EFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 368 bits (947), Expect = e-125
Identities = 154/372 (41%), Positives = 209/372 (56%), Gaps = 10/372 (2%)
Query: 3 TRLFRYYAGWADK---IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 59
L RYYA A + G V EP+GV I+PWN PL + A K+ PA
Sbjct: 104 AALLRYYAALARDFPFEERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPA 161
Query: 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
LA G T+VLK + +TPL A +++ EAGLPPGV+N+V G L H VDK++
Sbjct: 162 LAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVS 220
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
FTGST G+ + + L VTLELGGKS IV +DAD+D A A N GQ C
Sbjct: 221 FTGSTAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVC 279
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
A +R V S YD+ VE A VGDP Q GP + Q E++ YI G
Sbjct: 280 VALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRA 339
Query: 240 GGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297
GA+L TGG R +G++++PT+F V +DM IA++EIFGPV S++ Y D D+ ++ +
Sbjct: 340 EGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIA 399
Query: 298 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 357
N S YGL+ V+T +++ + R +R G+V +N F + D PFGG+KQSG GRE G
Sbjct: 400 NDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFRL-DFGAPFGGFKQSGIGREGGPE 458
Query: 358 SLSNYLQVKAVV 369
L YL+ K++
Sbjct: 459 GLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 367 bits (943), Expect = e-124
Identities = 171/360 (47%), Positives = 226/360 (62%), Gaps = 12/360 (3%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
R F ++AGWA + T A +P+GV GQI+PWNFPLLM AWK+ PALA G
Sbjct: 126 RHFYHHAGWAQLLD--TELAG--------WKPVGVVGQIVPWNFPLLMLAWKICPALAMG 175
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+VLK AE TPL+AL +++ EAGLPPGVLNIV+G G G+ALA+H VDK+AFTGS
Sbjct: 176 NTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGS 234
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T G+ + + A + K ++LELGGKSPFIV +DAD+D A E A++FNQGQ CCAGS
Sbjct: 235 TEVGRALRRATAGTG-KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGS 293
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R V ESV ++ + K VGDP I G +D Q ++I + + G GA
Sbjct: 294 RLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGAD 353
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
+ G L +KG + PT+FT V IA++EIFGPV +L ++ E + +N + YG
Sbjct: 354 VFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYG 413
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
LAA V++ NL A + +L+ G VWIN ++FDAA FGGY++SG GRE G L YL
Sbjct: 414 LAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 366 bits (941), Expect = e-124
Identities = 149/368 (40%), Positives = 215/368 (58%), Gaps = 10/368 (2%)
Query: 6 FRYYAGWADKIQGLTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALA 61
FR++AG A ++G A G Y H + +P+GV I PWN+PL+M AWK+ PALA
Sbjct: 108 FRFFAGAARCLEGKAA---GEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALA 164
Query: 62 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
GNT+VLK +E TPL+AL +++L + LPPGVLN+V+G G T G AL H +V ++ T
Sbjct: 165 AGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLT 223
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
GS TGK VL AA S +K LELGGK+P IV +DAD+D E ++N GQ C A
Sbjct: 224 GSIATGKHVLSAAADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTA 282
Query: 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDG 240
R + +YD V K A VGDP + GP I + +++ ++ R+ G
Sbjct: 283 ACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALG 342
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
++ TGGE KGYY +PT+ G + D I + E+FGPV S+ + D D+ ++ +N S
Sbjct: 343 HIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDS 402
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLA+ V+T ++ A+ + L+ G W+N + + +P GG KQSG G++ Y L
Sbjct: 403 DYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLE 462
Query: 361 NYLQVKAV 368
+Y V+ V
Sbjct: 463 DYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 364 bits (935), Expect = e-123
Identities = 170/377 (45%), Positives = 229/377 (60%), Gaps = 16/377 (4%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
FRY+AG +G + D HEP+GV GQIIPWNFPLLM WK+ PALA GN
Sbjct: 107 FRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNC 166
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK AEQTP S L + +L+ + LPPGV+N+V+G+G AG LAS + K+AFTG TT
Sbjct: 167 VVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETT 225
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQC 178
TG++++Q A++ N+ PVTLELGGKSP I DA DKA E + +F NQG+
Sbjct: 226 TGRLIMQYASE-NIIPVTLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEV 282
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C SR + ES+YD+F+E+A G+P G Q EQ EKIL YI G
Sbjct: 283 CTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGK 342
Query: 239 DGGAKLETGGER----LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 294
+ GA++ TGGER G Y PT F G + M I ++EIFGPV ++ +KD +E +
Sbjct: 343 EEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEAL 401
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
+ +N + YGL AGV+T + +TA + R ++ G VW NC+ ++ A FGGYKQSG GRE
Sbjct: 402 EIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGREN 461
Query: 355 GSYSLSNYLQVKAVVTA 371
L +Y Q K ++ +
Sbjct: 462 HKMMLDHYQQTKNLLVS 478
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-121
Identities = 155/373 (41%), Positives = 220/373 (58%), Gaps = 7/373 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ L Y+AG +++G T P G TL EP GV +I+ +N PL+ A K+ L
Sbjct: 82 VAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPL 141
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GNT+V+K EQ PLSAL +++L E LPPGV NI+ G G TAGAAL H +V ++A
Sbjct: 142 AAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIAL 200
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN-QGQCC 179
GS TG+ +++ AA+ +K VTLELGGK+ IV DAD + AA+ A + F GQ C
Sbjct: 201 IGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSC 259
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
+ SR FVHES+YD+ + + VGDP GP + +Q+++++ YI S
Sbjct: 260 GSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKR 319
Query: 240 GGAKLETGGER----LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 295
GA+L TGG R G+Y++PTVF V M IA++EIFGPV S+L+++D E++
Sbjct: 320 EGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVA 379
Query: 296 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 355
++N +YGL A ++T+++ A+ R + G VWIN PFGG K SG GRE+
Sbjct: 380 QANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREEC 439
Query: 356 SYSLSNYLQVKAV 368
L +Y Q K V
Sbjct: 440 LEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 358 bits (920), Expect = e-121
Identities = 173/376 (46%), Positives = 228/376 (60%), Gaps = 17/376 (4%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
LFRY+ G A +++G T P GP + T+ EP+GV G I+PWN PL++ A K+ PAL G
Sbjct: 87 LFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAG 145
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT+VLK AE PL+ L ++++L + LP GVLN+++GYG GAAL H +VDK+ FTGS
Sbjct: 146 NTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGS 204
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL-FFNQGQCCCAG 182
T GKI+ + AA L PV+LELGGKSP IV DAD+D A + A + F QGQ C AG
Sbjct: 205 TEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAG 263
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-G 241
SR FVHE +YD F+EK A K +GDP G I +QF K+ YI G+ G
Sbjct: 264 SRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSG 323
Query: 242 AKLETGG----ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297
A + GG E A G++++PT+F+GV ++ +A++EIFGPV + +KD DEVI +
Sbjct: 324 ATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMA 383
Query: 298 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 357
N S YGLAA V+T +L A AL G V +N +GG+KQSG GRE
Sbjct: 384 NDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGRE---A 440
Query: 358 SLSNYL----QVKAVV 369
SL L Q K V
Sbjct: 441 SLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 354 bits (912), Expect = e-120
Identities = 158/342 (46%), Positives = 207/342 (60%), Gaps = 11/342 (3%)
Query: 31 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 90
T+ EPIGV I P+NFPL + A KVGPA+A GN +VLK A QTPLSAL +++LL EAGL
Sbjct: 119 TIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGL 178
Query: 91 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 150
P G LN+V+G G T G AL + V ++FTGS G+ +A K+ LK VTLELG +
Sbjct: 179 PKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSNA 235
Query: 151 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 210
IV DAD++KA E F N GQ C + R FVHE +YD+F+E+ A K VVGD
Sbjct: 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGD 295
Query: 211 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 270
P GP I + E+I +++ V+GGA+L TGG+R GA ++PTV T V DM
Sbjct: 296 PLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPDM 352
Query: 271 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 330
+ +E+F PV S+ + LDE I +N S YGL AGVFT++L A R L VG V I
Sbjct: 353 KVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMI 412
Query: 331 NCFDVFDA---AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
N D +P+GG K+SG GRE Y++ ++K V
Sbjct: 413 N--DSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-114
Identities = 156/369 (42%), Positives = 220/369 (59%), Gaps = 6/369 (1%)
Query: 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
T L R AG +++G T P+D P V ++ P+GV I P+N+PL++ KV AL
Sbjct: 85 TPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFAL 144
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GNT+VLK +E+TP+ L +++++ EAGLP GV N+V+G G G L V + F
Sbjct: 145 AAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTF 204
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+ + + A + +LK +TLELGGK+P IV DAD+D A A + F +QGQ C
Sbjct: 205 TGSTAVGREIAEKAGR-HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICM 263
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
+ SR V E VYD+FV+K A A K VGDP GP I Q E+I + + V
Sbjct: 264 SASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAK 323
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL TGG+ G + +PTV T V DM I ++E FGPV S++ KD +E ++ +N +
Sbjct: 324 GAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDT 380
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSL 359
+YGL+A + T++L A L L G V IN + D A +PFGG K SG GRE G +S+
Sbjct: 381 EYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSM 440
Query: 360 SNYLQVKAV 368
+ ++K +
Sbjct: 441 EEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-113
Identities = 155/378 (41%), Positives = 225/378 (59%), Gaps = 10/378 (2%)
Query: 6 FRYYAGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
FR++A + + G T P D + T+ P+G G I PWN P ++ WK+ PALA GN
Sbjct: 106 FRFFADKCEEAMDGRTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGN 164
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK AE +PL+A ++++ EAGLP GV N+V G+G AG AL +H +V ++FTG T
Sbjct: 165 TVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGET 224
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TG I+++ A + LK ++ELGGKSP IV +DAD+++A + + +F G+ C A SR
Sbjct: 225 ATGSIIMRNGADT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSR 283
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
V ES+ + FVEK VG P + GP I E K+L Y+ + GA +
Sbjct: 284 LLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATI 343
Query: 245 ETGGERLGA-------KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297
GGER +G Y+ PTVFTG + M IA++EIFGPV +++ +KD +E I+++
Sbjct: 344 LVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKA 403
Query: 298 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 357
N ++YGLA V+T+++ A+ + AL G +W+N +V PFGG K SG GRE G+Y
Sbjct: 404 NDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTY 463
Query: 358 SLSNYLQVKAVVTALKNP 375
S Y + K V AL
Sbjct: 464 SFDFYTETKNVALALGPH 481
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 335 bits (862), Expect = e-112
Identities = 162/368 (44%), Positives = 228/368 (61%), Gaps = 8/368 (2%)
Query: 8 YYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
Y AG ++ G T P++ P T +PIGV I PWNFP+ + +WK+ PAL CGNT+
Sbjct: 107 YAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTV 166
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 126
V K AE TP AL + +L EAGLPPGV+N+V G G G AL H +VD ++FTGST
Sbjct: 167 VFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEV 226
Query: 127 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 186
G+ + + A+ N K V LE+GGK+P IV +DAD+D A E A ++ F GQ C A SR
Sbjct: 227 GERIGETCARPN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLI 285
Query: 187 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 246
VHESVYD+F+++ A + VGD GP I+ Q EK+L Y G + GA L
Sbjct: 286 VHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLL 345
Query: 247 GGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
GGERL KGY+++PTVFT V DM IA++EIFGPV ++++ L+E I+ +N ++Y
Sbjct: 346 GGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEY 405
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLS 360
GL++ ++T +++ A R L G ++N + + +PFGG K+SG G RE G+ +L
Sbjct: 406 GLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALD 465
Query: 361 NYLQVKAV 368
+ + KAV
Sbjct: 466 AFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-111
Identities = 150/363 (41%), Positives = 220/363 (60%), Gaps = 3/363 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
++A A ++ G T P+ + + +P+GV I PWNFP M K G ALA G
Sbjct: 87 LEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGC 146
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YGPTAGAALASHMEVDKLAFTGS 123
T+V+K AEQTPLSAL +++L +AG+P GVLN+++G G L + V K++FTGS
Sbjct: 147 TVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGS 206
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
T GKI+++ +A + +K V++ELGG +PFIV +DAD+D+A E A + F N GQ C +
Sbjct: 207 TNVGKILMKQSAST-VKKVSMELGGNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCAN 265
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
R +VH+ +YD+F +K K VG+ G+ QGP I+ + EK+ K+I V+ GAK
Sbjct: 266 RLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAK 325
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
+ TGG+R G + +PTV + V DML++K+E FGP+ + K+ D +EVI +N ++ G
Sbjct: 326 VVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVG 385
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
LAA F+ +L + AL G V IN + + PFGG KQSG GRE Y + YL
Sbjct: 386 LAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYL 445
Query: 364 QVK 366
+ K
Sbjct: 446 ETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 333 bits (856), Expect = e-111
Identities = 153/371 (41%), Positives = 223/371 (60%), Gaps = 3/371 (0%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
R R+YA DK+ G A + EP+GV I+PWNFPLL+ WK+GPALA G
Sbjct: 126 RAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAG 185
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
N+++LK +E++PLSA+ ++ L EAGLP GVLN+V+G+G AG AL+ H ++D +AFTGS
Sbjct: 186 NSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGS 245
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAG 182
T TGK +L+ A SN+K V LE GGKS IV D D+ +AA +F+NQGQ C AG
Sbjct: 246 TRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAG 305
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242
+R + ES+ D+F+ A G P G ID + + +IR G G
Sbjct: 306 TRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQ 365
Query: 243 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
L G R I PT+F V + ++++EIFGPV + ++ ++ +Q +N SQY
Sbjct: 366 LLLDG--RNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQY 423
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 362
GL A V+T +L A+ + R L+ GSV++N ++ D +PFGGYKQSG GR+K ++L +
Sbjct: 424 GLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKF 483
Query: 363 LQVKAVVTALK 373
++K + +L+
Sbjct: 484 TELKTIWISLE 494
|
Length = 494 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 333 bits (856), Expect = e-111
Identities = 149/374 (39%), Positives = 207/374 (55%), Gaps = 11/374 (2%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
YYA +++G + ++ P+GV I PWNFPL + A AL GN
Sbjct: 136 FLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGN 195
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK AE TP+ A + ++L EAGLPPGV+N + G G G L H +V +AFTGS
Sbjct: 196 TVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSR 255
Query: 125 TTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
G + + AAK LK V E+GGK+ IV EDAD+D+AAE + F QGQ C
Sbjct: 256 EVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKC 315
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
A SR VHESVYD+F+E+ VGDP + GP ID ++I +YI G
Sbjct: 316 SACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS 375
Query: 240 GGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297
G +L GGE L A+GY+++PT+F V D +A++EIFGPV +++K KD DE ++ +
Sbjct: 376 EG-RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIA 434
Query: 298 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REK 354
N ++YGL GVF+ + + R VG+++ N PFGG+K SG G +
Sbjct: 435 NDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAG 494
Query: 355 GSYSLSNYLQVKAV 368
G L ++Q K V
Sbjct: 495 GPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-111
Identities = 155/373 (41%), Positives = 218/373 (58%), Gaps = 8/373 (2%)
Query: 2 TTRLFRYYAGWADKIQGLT------APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 55
+ RY+AGWA KI G T + Y T EP+GV I+PWNF +++ WK
Sbjct: 103 SANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWK 162
Query: 56 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 115
+G ALA G TIV+K +E TPL+ L V++L EAG+P GVLN+V+G G GA L SH +V
Sbjct: 163 IGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDV 221
Query: 116 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 175
K++FTGS TGK + + AA S+L VTLELGGK+ +DAD+D E A F +Q
Sbjct: 222 AKVSFTGSVATGKKIGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQ 280
Query: 176 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235
GQ C A R +VH S +D+ V K VG P + GP + F+K+ Y+
Sbjct: 281 GQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLD 340
Query: 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 295
G ++ GGE L +GY+++PT+ D + ++E FGPV S + Y+D +E+IQ
Sbjct: 341 DARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQ 400
Query: 296 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 355
N + +GL A V+T+NL A + + G+VW+N D A+PFGG KQSG GRE G
Sbjct: 401 LINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFG 460
Query: 356 SYSLSNYLQVKAV 368
S + +Y ++K+V
Sbjct: 461 SAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-109
Identities = 155/362 (42%), Positives = 219/362 (60%), Gaps = 2/362 (0%)
Query: 8 YYAGWADKIQG-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
Y+A A ++ G + + L +P+GV G I PWNFPL M KVGPALA G T+
Sbjct: 132 YFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTV 191
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 126
V+K +E TPL+AL ++L +AG+PPGVLN+V G P G AL + +V K+ FTGST
Sbjct: 192 VVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAV 251
Query: 127 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 186
GK ++ AA + +K V+LELGG +PFIV +DAD+D A + A + F N GQ C +R
Sbjct: 252 GKKLMAGAAAT-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRIL 310
Query: 187 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 246
V E +YD+F E + K VVGD F+ G+ QGP I+ +K+ +++ V GAK+
Sbjct: 311 VQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLL 370
Query: 247 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 306
GG+R G + +PTV V +DMLI ++E+FGPV + ++K +E I +N ++ GLAA
Sbjct: 371 GGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAA 430
Query: 307 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 366
+FT +L A + AL G V +N + PFGG KQSG GRE Y + YL++K
Sbjct: 431 YIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIK 490
Query: 367 AV 368
V
Sbjct: 491 YV 492
|
Length = 498 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-107
Identities = 153/376 (40%), Positives = 221/376 (58%), Gaps = 13/376 (3%)
Query: 2 TTRLFRYYAGWADKIQGLTAPADG-PYH----VQTLHEPIGVAGQIIPWNFPLLMFAWKV 56
T RLF+ A A ++G T P D Y+ T+ EPIGV G I P+NFP +FA K+
Sbjct: 85 TIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKI 144
Query: 57 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 116
PA+A GN++V+K + TPL+A+ ++K+L EAGLPPGV+N+V+GYG G + ++ +V+
Sbjct: 145 APAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVN 204
Query: 117 KLAFTGSTTTGKIVLQLAAK--SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 174
++FTGST G L +A+K K V LELGG P IV +DAD+++A +A F N
Sbjct: 205 MISFTGSTAVG---LLIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFEN 261
Query: 175 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234
GQ C A R V E VYD+F++ K VGDP GP I E E++ +
Sbjct: 262 AGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLV 321
Query: 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 294
V+ G K+ GG+R G + PTV DM++ K+E+FGPV I K KD +E +
Sbjct: 322 NDAVEKGGKILYGGKRDE--GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAV 379
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGRE 353
+ +N+++YGL A VFT++++ A + R L G V IN F +PFGG+K+SG GRE
Sbjct: 380 EIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGRE 439
Query: 354 KGSYSLSNYLQVKAVV 369
Y++ + K +V
Sbjct: 440 GVRYTMLEMTEEKTIV 455
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 318 bits (817), Expect = e-106
Identities = 139/376 (36%), Positives = 188/376 (50%), Gaps = 20/376 (5%)
Query: 4 RLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV--- 56
+ RYYA + + A D +EP+GV I+PWNFP W+V
Sbjct: 65 WICRYYA---ENAEAFLADEPIETDAG-KAYVRYEPLGVVLGIMPWNFPF----WQVFRF 116
Query: 57 -GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGAALASHME 114
P L GNT++LK A P AL + +L EAG P GV N++ A+ +
Sbjct: 117 AAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE--AIIADPR 174
Query: 115 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 174
V + TGS G+ V A K NLK LELGG PFIV +DAD+DKA + A N
Sbjct: 175 VRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQN 233
Query: 175 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234
GQ C A R VHE VYD+F+EK VGDP GP + +++ + +
Sbjct: 234 AGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQV 293
Query: 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 294
V GA L GG+R G + PTV T V M +E+FGPV +++K KD +E I
Sbjct: 294 EEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAI 353
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
+N S +GL VFT +L+ A + R L G V+IN D +PFGG K+SG GRE
Sbjct: 354 ALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGREL 413
Query: 355 GSYSLSNYLQVKAVVT 370
G + + ++ +K V
Sbjct: 414 GRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-105
Identities = 149/372 (40%), Positives = 203/372 (54%), Gaps = 9/372 (2%)
Query: 5 LFRYYAGWADKI---QGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ A A ++ + + P T+ + P GV G I PWN+PLL + PAL
Sbjct: 85 AIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPAL 144
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +VLK +E TPL +++ AG P GVL +V+G G T GAAL VDK+AF
Sbjct: 145 AAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGAT-GAALIDA-GVDKVAF 202
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS TG+ V+ AA+ L PV LELGGK P IV DAD+++AA A + N GQ C
Sbjct: 203 TGSVATGRKVMAAAAE-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCI 261
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
+ R +VHESVYD+FV + A A G G GP + Q + + +++ V
Sbjct: 262 SVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAK 321
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAK TGG R G + +PTV T V DM + ++E FGPV ++ D DE I +N S
Sbjct: 322 GAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDS 381
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA--AIPFGGYKQSGQGREKGSYS 358
+YGL+A VF+ +L A + R L G+V IN + A+PFGG K SG GR G+
Sbjct: 382 RYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEG 441
Query: 359 LSNYLQVKAVVT 370
L + + KA+
Sbjct: 442 LREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-105
Identities = 142/357 (39%), Positives = 201/357 (56%), Gaps = 11/357 (3%)
Query: 20 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79
P + +P+GV G I PWN PLL+ WKVGPALACGNT+V+K +E+TP +A
Sbjct: 124 ATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTAT 183
Query: 80 YVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 138
+ ++++ G+P GV N+V G+GP +AG L H VD + FTG T TG +++ AA
Sbjct: 184 LLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADG- 242
Query: 139 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 198
+KPV+ ELGGK+ IV D D D A + F N GQ C R +V ++D+FV
Sbjct: 243 VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAA 302
Query: 199 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-------ERL 251
A A +G P GP I +E +K+L Y V+ GA + TGG
Sbjct: 303 LKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDAL- 361
Query: 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 311
A G +++PT++TG+ D + +EIFGP I + +EVI +N + YGLAA V+T
Sbjct: 362 -AGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTE 420
Query: 312 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368
+L A+ + R + VG VW+N + + D PFGG K SG GRE G +SL Y ++ V
Sbjct: 421 DLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 313 bits (804), Expect = e-104
Identities = 143/371 (38%), Positives = 207/371 (55%), Gaps = 12/371 (3%)
Query: 4 RLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 62
+ R A +I G + P+D P + + EP+GV I PWN P+++ + LA
Sbjct: 66 GMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAA 125
Query: 63 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLA 119
GNT+VLK +E +P + + ++ HEAGLP GVLN+V+ P AL +H V K+
Sbjct: 126 GNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVN 185
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
FTGST G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA A + F N GQ C
Sbjct: 186 FTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQIC 244
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
+ R VHES+ D+FVEK +K F G + G + + +++ + + +
Sbjct: 245 MSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALS 299
Query: 240 GGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
GAKL GG G + PT+ V DM I +E FGPV SI++ KD +E ++ +N
Sbjct: 300 KGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIAN 359
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSY 357
S+YGL+A VFT +L A + + + G+V IN V D +P GG K SG GR G +
Sbjct: 360 DSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKW 419
Query: 358 SLSNYLQVKAV 368
+ + + K +
Sbjct: 420 GIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-104
Identities = 147/337 (43%), Positives = 197/337 (58%), Gaps = 6/337 (1%)
Query: 34 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPP 92
EP+GV G I PWNFPL + V PALA GN +VLK A TP++ L ++K+ EAGLP
Sbjct: 129 EPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPK 188
Query: 93 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 152
GVLN+V G G G A H ++FTGST G+ + +LA + +LK V LELGG +PF
Sbjct: 189 GVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKKVALELGGNNPF 247
Query: 153 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 212
+V EDAD+D A A + F +QGQ C A +R VHE VYD+FVEK GDP
Sbjct: 248 VVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPS 307
Query: 213 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 272
GP I+ Q + +L I V+ GA L GGE A+G ++PTV + V +DM I
Sbjct: 308 DPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE---AEGNVLEPTVLSDVTNDMEI 364
Query: 273 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 332
A++EIFGPV I+K D +E ++ +N ++YGL+ VFT +L+ R + G IN
Sbjct: 365 AREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHIND 424
Query: 333 FDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 368
V D +PFGG K SG GR G ++L + K +
Sbjct: 425 QPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 312 bits (801), Expect = e-103
Identities = 139/372 (37%), Positives = 196/372 (52%), Gaps = 14/372 (3%)
Query: 8 YYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
Y G + + GLT P++ P H P+GV G I +NFP+ + W AL CGNT+
Sbjct: 105 YAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTV 164
Query: 67 VLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 122
V K +E TPL+A+ V+K+L E GLPPGV+N+V+G G G L V ++FTG
Sbjct: 165 VWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTG 223
Query: 123 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182
ST G+ V + A+ V LELGG + IV +DAD+D A +A GQ C
Sbjct: 224 STEVGRRVGETVARRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTT 282
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242
R VHESVYD+F+E+ + +GDP G GP I+ EK L I G
Sbjct: 283 RRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGG 342
Query: 243 KLETGGERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
+ TGG+R+ G G Y++PT+ TGV DD I ++E F P+ ++K+ L+E I +N
Sbjct: 343 TVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDV 402
Query: 301 QYGLAAGVFTHNLDTANTLMRALRV--GSVWINCFDVFDAAI--PFGGYKQSGQGREKGS 356
GL++ +FT +L A + G V +N A I FGG K++G GRE GS
Sbjct: 403 PQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVN-IPTSGAEIGGAFGGEKETGGGRESGS 461
Query: 357 YSLSNYLQVKAV 368
+ Y++
Sbjct: 462 DAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 308 bits (791), Expect = e-102
Identities = 139/371 (37%), Positives = 212/371 (57%), Gaps = 7/371 (1%)
Query: 2 TTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
T Y A WA + +G +D P ++ +GV I+PWNFP + A K+ PAL
Sbjct: 37 TADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPAL 96
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
GNTIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA + +V ++
Sbjct: 97 LTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS + G+ ++ AAK N+ V LELGGK+P IV +DAD+D A + + N GQ C
Sbjct: 157 TGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCN 215
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKGG-IQQGPQIDSEQFEKILKYIRSGV 238
R +V + +YDQFV + AM+ V G+P + I GP I++ E++ + + V
Sbjct: 216 CAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 274
Query: 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
+ GA++ GG+ + KGYY PT+ V+ +M I +E FGPV ++ + L+E I +N
Sbjct: 275 EEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMAN 334
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSY 357
S YGL + ++T NL+ A ++ L+ G +IN + F+A F G+++SG G G +
Sbjct: 335 DSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKH 393
Query: 358 SLSNYLQVKAV 368
L YLQ + V
Sbjct: 394 GLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 301 bits (773), Expect = 2e-99
Identities = 134/319 (42%), Positives = 184/319 (57%), Gaps = 7/319 (2%)
Query: 35 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPG 93
P+GV G I P+NFPL++ V PALA GN +VLK +TP+S V ++L EAGLP G
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169
Query: 94 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153
VL+++ G G AG AL V ++FTGST G+ V + A + +LK V+LELGGK+ I
Sbjct: 170 VLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALI 227
Query: 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 213
V +DAD+D AA + F +QGQ C A R VHESV D + K A A VGDP
Sbjct: 228 VLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPAT 287
Query: 214 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 273
G + GP I++ Q +++ + V GA+LE GG G + +PTV +GVK M
Sbjct: 288 GQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAF 344
Query: 274 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 333
+EIFGPV + + +E + +N ++YGL+AG+ + ++ A L LR G + IN
Sbjct: 345 DEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQ 404
Query: 334 DVFDAAI-PFGGYKQSGQG 351
V D PFGG SG G
Sbjct: 405 TVNDEPHNPFGGMGASGNG 423
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 300 bits (771), Expect = 7e-99
Identities = 147/371 (39%), Positives = 202/371 (54%), Gaps = 13/371 (3%)
Query: 6 FRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
R+ A A + G + D + TL EP+GV I P+N PL A K+ PA+
Sbjct: 86 LRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAI 145
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A N IVLK +E+TPLSA+Y++ LL+EAGLPP +L++V+G G L +H +VD + F
Sbjct: 146 AANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTF 205
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TG GK + AA + K LELGG P IV +DAD+++AA LA + N GQ C
Sbjct: 206 TGGVAVGKAI---AATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCT 262
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
A R VHESV D+FV+ + VVGDP G ID E +I + +
Sbjct: 263 AVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQ 322
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA++ G +R GA PTV V D + +E FGPV +++ KDLDE I SN++
Sbjct: 323 GARVLLGNQRQGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNST 379
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQG-REKGSYS 358
YGL++GV T++LDT L+ L VG+V +N F + PFGG K SG G +E +
Sbjct: 380 AYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREA 439
Query: 359 LSNYLQVKAVV 369
+ VK
Sbjct: 440 MKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 300 bits (771), Expect = 7e-99
Identities = 138/369 (37%), Positives = 204/369 (55%), Gaps = 9/369 (2%)
Query: 7 RYYAGWADKIQGLTA-PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RYYAG A G P G + + L EP+GVAG I+PWN P+++ + PALA G T
Sbjct: 89 RYYAGLARTEAGRMIEPEPGSFSL-VLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCT 147
Query: 66 IVLKTAEQTPLSALYVSKLLHEA-GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
+V+K A QT + ++L E LP GV+N+ + G A L + +VD ++FTGST
Sbjct: 148 VVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGST 207
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TG+ + AA LK + LELGGK+P IV +DAD+D A AL GQ C AGSR
Sbjct: 208 ATGR-AIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSR 266
Query: 185 TFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
V S+ D+ ++ A LA +V G GP ID +++ + + + GA+
Sbjct: 267 VLVQRSIADEVRDRLAARLAAVKV-GPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAE 325
Query: 244 LETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
+ G + AKG +++PT+ D I ++EIFGPV ++ + D E + +N +
Sbjct: 326 VVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDT 385
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAA V+T +L A + RA+R G+VWIN ++ A GGY+QSG GR G +L
Sbjct: 386 DYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALE 445
Query: 361 NYLQVKAVV 369
++++ K +
Sbjct: 446 DFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 298 bits (765), Expect = 5e-98
Identities = 151/370 (40%), Positives = 208/370 (56%), Gaps = 12/370 (3%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
R A A++I+G P D T+ EP+GV I P+NFPL + A K+ PA+
Sbjct: 89 LRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAI 148
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A G +VLK A +TPLSAL ++K+L EAG+P GVL +V+G G A A+ V L+F
Sbjct: 149 ATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSF 208
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS G+ L A + K + LELGG +P IV DAD+D A E F++ GQ C
Sbjct: 209 TGSAAVGE---ALRANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCI 265
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
+ R +VHE +YD+F+E A K VGDP GP I E E++ +++ V+
Sbjct: 266 SVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEA 325
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA+L GGER GA KPTV V D ++ +E FGPV I++Y D +E I+ +N++
Sbjct: 326 GARLLCGGERDGA---LFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANST 382
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSL 359
YGL AG+FT +L+ A L VG V +N F +PFGG K+SG GRE Y++
Sbjct: 383 DYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAM 442
Query: 360 SNYLQVKAVV 369
+ K VV
Sbjct: 443 EEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 2e-97
Identities = 153/380 (40%), Positives = 207/380 (54%), Gaps = 28/380 (7%)
Query: 7 RYYAGWADKIQGLTAPAD--GPYHVQT----LHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
RYYA A K L AP G V T L +P GV G I PWN+PL + PAL
Sbjct: 123 RYYARRAPK---LLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPAL 179
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
GN +VLK QTPL+AL +LL+EAGLP + +V+G GP G AL + D L F
Sbjct: 180 LAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMF 237
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST TG+++ + A L +LELGGK+P IV +DAD+DKAA A A F N GQ C
Sbjct: 238 TGSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCI 296
Query: 181 AGSRTFVHESVYDQFVEK--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
+ R +VHES+YD+FV A AM+ +G + G I Q E + ++ V
Sbjct: 297 SIERIYVHESIYDEFVRAFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAV 354
Query: 239 DGGAKLETGGER---LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 295
GA + GG+ LG + +PTV TGV DM +A++E FGPV S+ D+DE ++
Sbjct: 355 AKGATVLAGGKARPDLGP--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412
Query: 296 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQSGQ 350
R+N + YGL A V+T + + +R G+V +N + + AA P GG K SG
Sbjct: 413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVN--EGYAAAWGSVDAPMGGMKDSGL 470
Query: 351 GREKGSYSLSNYLQVKAVVT 370
GR G+ L Y + + + T
Sbjct: 471 GRRHGAEGLLKYTESQTIAT 490
|
Length = 524 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 296 bits (759), Expect = 2e-96
Identities = 142/376 (37%), Positives = 194/376 (51%), Gaps = 19/376 (5%)
Query: 6 FRYYA----GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 61
YYA AD + P + H + + P+GV I PWNFP + A A+
Sbjct: 141 LEYYARQMLKLADGKPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIV 197
Query: 62 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
GNT++LK A TP+ A ++L EAGLP GV+N V G G G L H + + FT
Sbjct: 198 AGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFT 257
Query: 122 GSTTTGKIVLQLAAKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176
GS G + + AAK LK V E+GGK +V EDAD+D AAE + F G
Sbjct: 258 GSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSG 317
Query: 177 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236
Q C A SR VHE VYD+ +EK L + VG+P GP I+ F+KI+ YI
Sbjct: 318 QKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEI 376
Query: 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296
G + G +L GGE +KGY+I+PT+F V I ++EIFGPV + +K KD D ++
Sbjct: 377 GKEEG-RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEI 435
Query: 297 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREK 354
+N ++YGL V ++N + R VG+++ N C PFGG+ SG +
Sbjct: 436 ANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKA 495
Query: 355 GS--YSLSNYLQVKAV 368
G Y L +LQ K V
Sbjct: 496 GGPDY-LLLFLQAKTV 510
|
Length = 514 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 9e-95
Identities = 148/384 (38%), Positives = 200/384 (52%), Gaps = 36/384 (9%)
Query: 7 RYYAGWADK----------IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 56
RYYA A++ I LT P GV G I PWN+PL +
Sbjct: 87 RYYARRAERLLKPRRRRGAIPVLT-------RTTVNRRPKGVVGVISPWNYPLTLAVSDA 139
Query: 57 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 116
PAL GN +VLK QT L+AL+ +LL EAGLP + +V+G G G A+ + D
Sbjct: 140 IPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--AD 197
Query: 117 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176
+ FTGST TG++V + A L +LELGGK+P IV EDAD+DKAA A A F N G
Sbjct: 198 YVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAG 256
Query: 177 QCCCAGSRTFVHESVYDQFVEK--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234
Q C + R +VHESVYD+FV + A A++ +G G G I Q +++ ++
Sbjct: 257 QLCVSIERIYVHESVYDEFVRRFVARTRALR--LGAALDYGPDMGSLISQAQLDRVTAHV 314
Query: 235 RSGVDGGAKLETGGER---LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 291
V GA + GG LG Y+ +PTV TGV +DM + +E FGPV SI + D D
Sbjct: 315 DDAVAKGATVLAGGRARPDLGP--YFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDD 372
Query: 292 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYK 346
E I+ +N + YGL A V+T + + LR G+V +N + + AA P GG K
Sbjct: 373 EAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVN--EGYAAAWASIDAPMGGMK 430
Query: 347 QSGQGREKGSYSLSNYLQVKAVVT 370
SG GR G+ L Y + + V
Sbjct: 431 DSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 287 bits (736), Expect = 1e-93
Identities = 133/367 (36%), Positives = 181/367 (49%), Gaps = 8/367 (2%)
Query: 7 RYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RY A++ + + P + EP+GV I PWN+P L V PAL GN
Sbjct: 87 RYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNA 146
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
++LK + QTPL + EAGLP GV ++ T AAL + +D ++FTGS
Sbjct: 147 VILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHET-SAALIADPRIDHVSFTGSVA 205
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE-LAHYALFFNQGQCCCAGSR 184
G+ + Q AA V LELGGK P V DAD+D AAE L A FFN GQ CC+ R
Sbjct: 206 GGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGA-FFNSGQSCCSIER 263
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
+VHES+YD FVE A+ +GDP GP + + + + I + GA+
Sbjct: 264 IYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARA 323
Query: 245 ETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
G A G Y+ PTV T V M + ++E FGPV I+K K E I N S+
Sbjct: 324 LIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSE 383
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSN 361
YGL A V+T ++ A L L G+V++N D D A+ + G K SG+G
Sbjct: 384 YGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQ 443
Query: 362 YLQVKAV 368
+ K+
Sbjct: 444 LTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 283 bits (725), Expect = 1e-91
Identities = 143/360 (39%), Positives = 210/360 (58%), Gaps = 2/360 (0%)
Query: 8 YYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
++A +I G T P + + +PIGV I PWNFP M K GPALA G T+
Sbjct: 118 WFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTM 177
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 126
VLK A QTP SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST
Sbjct: 178 VLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEI 237
Query: 127 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 186
G+ +++ AK ++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +
Sbjct: 238 GRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLY 296
Query: 187 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 246
V + VYD+F EK K +GD + G+ GP ID + K+ ++I ++ GA++
Sbjct: 297 VQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVC 356
Query: 247 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 306
GG+ G + +PT+ V + +AK+E FGP+ + ++KD +VI ++N +++GLAA
Sbjct: 357 GGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAA 416
Query: 307 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 366
+ +L + AL G V IN + + PFGG K SG GRE Y + +YL++K
Sbjct: 417 YFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 2e-89
Identities = 134/343 (39%), Positives = 186/343 (54%), Gaps = 16/343 (4%)
Query: 34 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 93
EP+GV I P+N+PL + K+ PAL GNT+V K A Q L + +++ H+AG P G
Sbjct: 140 EPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKG 199
Query: 94 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153
V+N+V+G G G L +H +D ++FTGST G + + K + LELGGK P I
Sbjct: 200 VVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPM---KRLVLELGGKDPAI 256
Query: 154 VCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 212
V DAD++ AA E+ AL ++ GQ C A R VHESV D+ VE K VG P+
Sbjct: 257 VLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPW 315
Query: 213 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 272
G+ P ID + + + I V GA + GG R G G I PT+ V DM +
Sbjct: 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG--GNLIYPTLLDPVTPDMRL 373
Query: 273 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 332
A +E FGPV I++ D++E I+ +N S YGL A +FT +++ A L AL VG+V IN
Sbjct: 374 AWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINS 433
Query: 333 F-----DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370
D F PF G K SG G + +L + + K +V
Sbjct: 434 KCQRGPDHF----PFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 2e-89
Identities = 131/337 (38%), Positives = 179/337 (53%), Gaps = 10/337 (2%)
Query: 35 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 94
PIG I P+NFPL + A KV PA+A G VLK A +TPLSAL + ++L E GLP G
Sbjct: 123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGA 182
Query: 95 LNIVSGYGPTAGAA-LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153
+++ A L + + L+FTGS G + A K K V LELGG + I
Sbjct: 183 FSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAAVI 237
Query: 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 213
V DAD+D AA+ + F+ GQ C + R VH SVYD+F + A GDP
Sbjct: 238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKD 297
Query: 214 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 273
GP I + E++ ++ VD GAKL TGG+R G ++PT+ V DM +
Sbjct: 298 DATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVN 354
Query: 274 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 333
+E+FGPV ++ Y D DE + N S++GL AGVFT +L+ A L VG V IN
Sbjct: 355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDV 414
Query: 334 DVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
F +P+GG K SG GRE Y++ + + +V
Sbjct: 415 PTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV 451
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 6e-89
Identities = 143/370 (38%), Positives = 207/370 (55%), Gaps = 10/370 (2%)
Query: 5 LFRYYAGWADKIQGLTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+FR++AG A + GL A G Y H + +P+GV I PWN+PL+M AWK+ PAL
Sbjct: 106 VFRFFAGAARCLSGLAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPAL 162
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L H +V ++
Sbjct: 163 AAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSL 221
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS TG+ +L A S +K +ELGGK+P IV +DAD+D E F+N GQ C
Sbjct: 222 TGSIATGEHILSHTAPS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCT 280
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVD 239
A R + +YD VEK A G P + GP E+++K + +
Sbjct: 281 AACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKAL 340
Query: 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
G K+ TGGE+ GYY PT+ G K D I + E+FGPV SI + D ++V+ +N
Sbjct: 341 GHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWAND 400
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 359
SQYGLA+ V+T ++ A+ L L+ G W+N + + +P GG K SG G++ Y L
Sbjct: 401 SQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGL 460
Query: 360 SNYLQVKAVV 369
+Y V+ ++
Sbjct: 461 EDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 3e-87
Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 4/358 (1%)
Query: 18 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77
G+ +P P E +GV G I PWNFP + K+GPALA GNT+VLK A TP
Sbjct: 124 GVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWC 183
Query: 78 ALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 136
A + +L+ E PPGV+NIV+ GA LA VD ++FTGST TG+ V+ AA
Sbjct: 184 AAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAA 243
Query: 137 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 196
+ LK V LELGGKS FIV +DAD+ A +A + + + GQ C +R V + YD+ V
Sbjct: 244 T-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAV 302
Query: 197 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AK 254
A A GDP G GP I + Q +++ Y+ V G + GG R +
Sbjct: 303 AAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDR 362
Query: 255 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314
G++++PTV G+ ++ +A++EIFGPV +++ + D+ ++ +N S YGL+ VF + +
Sbjct: 363 GFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPE 422
Query: 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372
A + +R G+V +N + A PFGGYKQSG GRE G YL+ K + TA
Sbjct: 423 RAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIATAA 480
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 8e-86
Identities = 126/350 (36%), Positives = 183/350 (52%), Gaps = 18/350 (5%)
Query: 34 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAG 89
EP+GV G I+ WN+P + AL GN IV+K +EQ S+ + + + L G
Sbjct: 119 EPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACG 178
Query: 90 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 149
P ++ +V+ T AL SH +D + F GS GK V+ AA+S L PV LELGGK
Sbjct: 179 HDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LTPVVLELGGK 236
Query: 150 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 209
P IV +DAD+D+ A + F + GQ C R VHE +YD+ +E G
Sbjct: 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQG 296
Query: 210 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTG 265
P G + G I +F+++ + + V+ GA+L GG+R +G+Y PT+
Sbjct: 297 PPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVD 356
Query: 266 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 325
V DM IA++E+FGPV ++K D +E ++ +N+++YGL A VF ++ A + L
Sbjct: 357 VTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLET 416
Query: 326 GSVWINCFDVF--DAAIPFGGYKQSGQGR---EKGSYSLSNYLQVKAVVT 370
G V IN F V +PFGG K SG GR E+G L N K+V
Sbjct: 417 GMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCN---PKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 7e-80
Identities = 136/372 (36%), Positives = 192/372 (51%), Gaps = 12/372 (3%)
Query: 7 RYYAGWADKI--QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
YYA ++ +G + Q ++ P GV I PWNFP + + GN
Sbjct: 138 EYYARQMIELAKGKPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGN 196
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
+VLK AE P+ A ++L EAGLP GV+ V G G G L H + + FTGS
Sbjct: 197 CVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSR 256
Query: 125 TTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
G + + AAK +LK V E+GGK IV EDAD++ AA+ A + F GQ C
Sbjct: 257 EVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKC 316
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
AGSR VHE VYD+ VE+ + VG P + GP ID + F KI++YI G
Sbjct: 317 SAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKA 376
Query: 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
G +L +GG +KGY+I PT+F V +A++EIFGPV + ++ D DE ++ +N
Sbjct: 377 EG-RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANN 435
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSY 357
++YGL GV ++N D N VG+++ N PFGG+K SG + G
Sbjct: 436 TEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGP 495
Query: 358 S-LSNYLQVKAV 368
L+ ++Q K V
Sbjct: 496 DYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 250 bits (641), Expect = 4e-79
Identities = 124/334 (37%), Positives = 169/334 (50%), Gaps = 19/334 (5%)
Query: 29 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA 88
+ +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P +A+ +++LL EA
Sbjct: 130 TYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEA 189
Query: 89 GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 148
GLP GVLN+V G G A AL H ++ ++F GST G+ + + AA + K V G
Sbjct: 190 GLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANG-KRVQALGGA 247
Query: 149 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 208
K+ +V DAD+++ A A F GQ C A S D+++ K A K V
Sbjct: 248 KNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKV 307
Query: 209 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFT 264
G G GP I E+I I SGV+ GAKL G + G ++ PT+
Sbjct: 308 GAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILD 367
Query: 265 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 324
V DM I K+EIFGPV SI++ LDE I NA+ YG A +FT + A R +
Sbjct: 368 NVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVD 427
Query: 325 VGSVWINCFDVFDAAIP-------FGGYKQSGQG 351
G V IN IP FGG+K S G
Sbjct: 428 AGMVGIN------VPIPVPLAFFSFGGWKGSFFG 455
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 239 bits (612), Expect = 6e-75
Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 12/339 (3%)
Query: 21 APADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79
P V T EP+ GV I P+N P+ A K+ PA+A N +V+K +E+TPLSAL
Sbjct: 124 TPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSAL 183
Query: 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 139
Y++ +L+EAGLPP +L +V+G L ++ VD + FTG GK + AA++
Sbjct: 184 YLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AARAGY 240
Query: 140 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 199
+ LELGG P IV EDAD+D+AA+LA + N GQ C A R V ESV D+F E
Sbjct: 241 RRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELL 300
Query: 200 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 259
GDP + G ID + + GA+L G R GA
Sbjct: 301 VEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGA---LYA 357
Query: 260 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319
PTV V M + ++E FGPV ++++ D+D+ I+ SN++ YGL++GV T+ LD
Sbjct: 358 PTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRF 417
Query: 320 MRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 355
+ L+VG+V N ++V + PFGG K SG G ++G
Sbjct: 418 IAELQVGTV--NVWEVPGYRLELTPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 6e-73
Identities = 133/336 (39%), Positives = 177/336 (52%), Gaps = 24/336 (7%)
Query: 33 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 89
+EP GV I PWN+P F GP A+A GNT +LK +E TP ++ ++K++ EA
Sbjct: 98 YEPKGVCLIISPWNYP---FNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA- 153
Query: 90 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 149
+ + G A A L + D + FTGS GKIV+ AAK +L VTLELGGK
Sbjct: 154 FDEDEVAVFEGDAEVAQALLE--LPFDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGK 210
Query: 150 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 209
SP IV E AD+ KAA+ + F N GQ C A FVHESV D FVE A +++ G
Sbjct: 211 SPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKA-EIEKFYG 269
Query: 210 DPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 265
+ P ++ F+++ + V GAK+E GG+ A YI PTV T
Sbjct: 270 K--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTN 326
Query: 266 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 325
V DM I ++EIFGPV I+ Y+DLDEVI+ NA LA VF+ + N ++
Sbjct: 327 VTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSS 386
Query: 326 GSVWINCFDVF----DAAIPFGGYKQSGQGREKGSY 357
G V +N DV + +PFGG SG G G Y
Sbjct: 387 GGVVVN--DVVLHFLNPNLPFGGVNNSGIGSYHGVY 420
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 2e-72
Identities = 135/373 (36%), Positives = 186/373 (49%), Gaps = 19/373 (5%)
Query: 6 FRYYAGWADKIQGLTA--PAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV--- 56
FRYYA + + L A PAD G ++P+GV ++PWNFPL W+V
Sbjct: 91 FRYYA---EHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPL----WQVVRF 143
Query: 57 -GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 115
PAL GN +LK A P +ALY++ L AG P G + G A A+ V
Sbjct: 144 AAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLL-VGSGAVEAILRDPRV 202
Query: 116 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 175
TGS G+ V +A +K LELGG PFIV AD+D+AAE A A N
Sbjct: 203 AAATLTGSEPAGRAVAAIAGDE-IKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNN 261
Query: 176 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235
GQ C A R VH VYD F EK A VGDP GP + +++ K +
Sbjct: 262 GQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVD 321
Query: 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 295
V GA + GG+R G++ PTV T + DM + +E+FGPV S+ + D+DE I+
Sbjct: 322 DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIE 381
Query: 296 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 355
+NA+ +GL + +T + + L G V+IN V +PFGG K+SG GRE
Sbjct: 382 IANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELS 441
Query: 356 SYSLSNYLQVKAV 368
++ + + +K V
Sbjct: 442 AHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 232 bits (595), Expect = 2e-72
Identities = 127/368 (34%), Positives = 181/368 (49%), Gaps = 37/368 (10%)
Query: 16 IQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 72
+ GLT P++ P H + E P+GV G I +NFP+ ++ W AL CGN +V K +
Sbjct: 112 LYGLTIPSERPGHR--MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSP 169
Query: 73 QTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 128
TPL+A+ V+K+ L + GLP + ++V G G G AL V ++FTGST G+
Sbjct: 170 TTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGR 228
Query: 129 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 188
V Q A LELGG + IV EDAD+D A +A GQ C R VH
Sbjct: 229 QVGQAVAA-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVH 287
Query: 189 ESVYDQFVEKANALAMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 247
ES+YD+ +E+ A K+V +GDP G GP + L I G + G
Sbjct: 288 ESIYDEVLERLKK-AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFG 346
Query: 248 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 307
G+ + G Y++PT+ G+ D I K+E F P+ +LK+ L+E I +N GL++
Sbjct: 347 GKVIDGPGNYVEPTIVEGLS-DAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSS 405
Query: 308 VFTHNLDTANTLMRALRVGS----VWINCFDVFDAAIP---------FGGYKQSGQGREK 354
+FT +L A + GS V +N I FGG K++G GRE
Sbjct: 406 IFTTDLRNAFRWLGPK--GSDCGIVNVN--------IGTSGAEIGGAFGGEKETGGGRES 455
Query: 355 GSYSLSNY 362
GS + Y
Sbjct: 456 GSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 5e-72
Identities = 118/358 (32%), Positives = 178/358 (49%), Gaps = 23/358 (6%)
Query: 20 TAPADGPYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSA 78
P + EP+GV I PWN+PL L A +G A+A GNT+VLK +E P ++
Sbjct: 85 VPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIG-AIAAGNTVVLKPSELAPATS 143
Query: 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 138
++KL+ + P + +V G A A LA D + FTGS GKIV++ AAK +
Sbjct: 144 ALLAKLIPKY-FDPEAVAVVEGGVEVATALLAEPF--DHIFFTGSPAVGKIVMEAAAK-H 199
Query: 139 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 198
L PVTLELGGKSP IV +DA+++ AA + F N GQ C A VHES+ D+ +E
Sbjct: 200 LTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIE- 258
Query: 199 ANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 254
+K+ + + + ++ P I+ F+++ + K+ GG+ +
Sbjct: 259 ----ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLL-----DDGKVVIGGQV-DKE 308
Query: 255 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314
YI PT+ V D + ++EIFGP+ IL Y DLDE I+ N+ LA +F+ +
Sbjct: 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKA 368
Query: 315 TANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370
++ G V +N +PFGG SG G G + +K+V+
Sbjct: 369 VQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 2e-70
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 17/377 (4%)
Query: 6 FRYYAGWADKIQG--LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
RYYA A +++ + ++ + +G I PWNFP+ +F + +A G
Sbjct: 123 IRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVG 182
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT++ K AE + V ++ HEAG PPGV+ + G G GA L H + + FTGS
Sbjct: 183 NTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGS 242
Query: 124 TTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 178
TGK + + AA+ + K + +E GGK+ IV E AD + E + F QGQ
Sbjct: 243 LETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQK 302
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C A SR + + Y+ +E+ A + VG P + G GP ID+EQ K+L YI G
Sbjct: 303 CSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGK 362
Query: 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD--EVIQR 296
+ G +L GG+RL +GY++ PTV V IA++EIFGPV S+++YKD D E ++
Sbjct: 363 NEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEV 421
Query: 297 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGR 352
+N++ YGL GV++ + R VG+++IN A+ PFGG+K SG
Sbjct: 422 ANSTPYGLTGGVYSRKREHLEEARREFHVGNLYIN--RKITGALVGVQPFGGFKLSGTNA 479
Query: 353 EKGS-YSLSNYLQVKAV 368
+ G + L +L++KAV
Sbjct: 480 KTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 1e-66
Identities = 122/349 (34%), Positives = 178/349 (51%), Gaps = 29/349 (8%)
Query: 33 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 89
EP+GV I PWN+P+L+ + P A+A G T+VLK +E TP +A +++L+ +
Sbjct: 106 KEPLGVVLIIGPWNYPVLL---ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY- 161
Query: 90 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 149
L P +V G P A L DK+ +TGS G+I+ + AAK +L PVTLELGGK
Sbjct: 162 LDPDAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGK 218
Query: 150 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 209
SP IV ++AD++ AA+ + F N GQ C A V SVYD+FVE +K+V+
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLD 273
Query: 210 DPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 265
+ + GG P ++ F ++ + + K+ GGE A +I PT+ +
Sbjct: 274 EFYPGGANASPDYTRIVNPRHFNRLKSLLDT---TKGKVVIGGEMDEAT-RFIPPTIVSD 329
Query: 266 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 325
V D + +E+FGPV I+K DLDE I+ N+ LA +FT + + ++ R
Sbjct: 330 VSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRS 389
Query: 326 GSVWINCFDVFDAA----IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370
G V IN D PFGG SG G G Y + + VV
Sbjct: 390 GGVVIN--DTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVVK 436
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 2e-66
Identities = 123/345 (35%), Positives = 173/345 (50%), Gaps = 32/345 (9%)
Query: 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTP-LSALYV 81
P + ++P+GV G I+PWN+PL + +GP ALA GN +++K +E TP SAL +
Sbjct: 92 PAKAEVEYQPLGVVGIIVPWNYPLYL---ALGPLIAALAAGNRVMIKPSEFTPRTSAL-L 147
Query: 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 141
++LL E + +V+G G AA S + D L FTGST G+ V++ AA+ NL P
Sbjct: 148 AELLAEY-FDEDEVAVVTG-GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAAE-NLTP 203
Query: 142 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 201
VTLELGGKSP I+ DAD+ KAAE + N GQ C A V E ++FV A A
Sbjct: 204 VTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKA 263
Query: 202 LAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLET---GGERLGAK 254
A+ ++ + P I+ + ++ + GA++ GE A
Sbjct: 264 -AVAKMYPT-----LADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAAT 317
Query: 255 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314
+ PT+ V DDM + ++EIFGP+ IL Y LDE I NA LA F +
Sbjct: 318 R-KLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKA 376
Query: 315 TANTLMRALRVGSVWINCFDV-FDAA---IPFGGYKQSGQGREKG 355
+ ++R G V IN D A +PFGG SG G G
Sbjct: 377 EQDRVLRRTHSGGVTIN--DTLLHVAQDDLPFGGVGASGMGAYHG 419
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 2e-66
Identities = 118/357 (33%), Positives = 175/357 (49%), Gaps = 36/357 (10%)
Query: 34 EPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 92
EP GV I PWN+P L A +G A+A GNT VLK +E TP ++ ++K++ E
Sbjct: 99 EPYGVVLIIAPWNYPFQLALAPLIG-AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156
Query: 93 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 152
+ +V G L D + FTGS GKIV++ AAK +L PVTLELGGKSP
Sbjct: 157 EYVAVVEGGVEENQELLDQKF--DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPC 213
Query: 153 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 212
IV EDA++ AA+ + F N GQ C A VHESV ++F++ +K + +
Sbjct: 214 IVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK-----ELKEEIKKFY 268
Query: 213 KGGIQQGP---QIDSEQ-FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 268
+ P +I +E+ F+++ + +G K+ GG + YI+PT+ V
Sbjct: 269 GEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRETLYIEPTILDNVTW 322
Query: 269 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 328
D + ++EIFGP+ +L Y LDE I+ + LA +F+ + ++ L G
Sbjct: 323 DDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGG 382
Query: 329 WINCFDVFDAAI-------PFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 378
IN D + PFGG SG G G YS + K+++ K W
Sbjct: 383 CIN-----DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL---KKSTWF 431
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 215 bits (551), Expect = 2e-66
Identities = 117/342 (34%), Positives = 168/342 (49%), Gaps = 10/342 (2%)
Query: 20 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79
T A G ++ H P GV P+NFP + + PAL GNT+V K +E TP A
Sbjct: 84 TPMAQGRAVLR--HRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAE 141
Query: 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 139
+ +L EAGLPPGVLN+V G G G ALA+H +D L FTGS TG ++ + A
Sbjct: 142 LMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPG 200
Query: 140 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEK 198
K + LE+GG +P +V + AD+D AA L + F GQ C R V + V D F+E+
Sbjct: 201 KILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLER 260
Query: 199 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 258
A + +G P GP I + + L + + G + ERL A ++
Sbjct: 261 LVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFL 320
Query: 259 KPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316
P + T D + +EIFGP+ + +Y D DE I +NA+++GL+AG+ + +
Sbjct: 321 SPGIIDVTDAAD---VPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALF 377
Query: 317 NTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSY 357
+ +R G V N + PFGG SG R Y
Sbjct: 378 ERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYY 419
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 212 bits (543), Expect = 3e-64
Identities = 124/377 (32%), Positives = 183/377 (48%), Gaps = 37/377 (9%)
Query: 7 RYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RYYA A ++ + L GV I PWNFPL +F ++ ALA GNT
Sbjct: 138 RYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNT 197
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
++ K AEQTPL A +LLHEAG+P VL +V G G G AL +H +D + FTGST
Sbjct: 198 VIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTE 257
Query: 126 TGKIVLQ-LAAKSN-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAG 182
T K++ + LA + + P+ E GGK+ IV A ++A ++ A F + GQ C A
Sbjct: 258 TAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSAL 316
Query: 183 SRTFVHESVYDQFVE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
++ E + ++F+E K ++K VGDP+ GP ID + + +
Sbjct: 317 RLLYLQEEIAERFIEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAHT------ 368
Query: 241 GAKLETGGERL-------GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLD 291
+L G L GY++ P + V L E+FGP+ ++++K DLD
Sbjct: 369 --ELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLD 424
Query: 292 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQ 347
E I+ NA+ YGL G+ + + + G+++IN AI PFGG+
Sbjct: 425 EAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNIT--GAIVGRQPFGGWGL 482
Query: 348 SGQGREKGSYSLSNYLQ 364
SG G + G NYL
Sbjct: 483 SGTGPKAGGP---NYLL 496
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 2e-62
Identities = 126/356 (35%), Positives = 172/356 (48%), Gaps = 13/356 (3%)
Query: 18 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77
GLT + G T EPIGV I +N PL + +V PA+A G +++K A TPLS
Sbjct: 108 GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLS 166
Query: 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 137
L LLHEAGLP G V A L + V +F GS G ++ +S
Sbjct: 167 CLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIGSARVGWML-----RS 220
Query: 138 NLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 194
L P T LE GG +P IV AD+D F++ GQ C + R FV + D
Sbjct: 221 KLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADD 280
Query: 195 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 254
F ++ A A K VVGDP + GP I + +++ +++ V GA+L GG+RL
Sbjct: 281 FAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDT 340
Query: 255 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314
Y PTV D ++ EIFGPV + Y DLDE I ++N+ A VFT +LD
Sbjct: 341 TY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLD 398
Query: 315 TANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
A +R L +V +N F +PF G +QSG G Y++ + Q K V
Sbjct: 399 VALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 2e-57
Identities = 112/338 (33%), Positives = 172/338 (50%), Gaps = 11/338 (3%)
Query: 34 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 93
EP+GV I WN+PL + + A+A GNT+VLK +E +P ++ ++KLL + L P
Sbjct: 108 EPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPS 166
Query: 94 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153
+ ++ G L D + FTGS GK+V+Q AA+ NL P TLELGGKSP I
Sbjct: 167 YVRVIEGGVEVTTELLKEPF--DHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVI 223
Query: 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 213
V + ++ AA + F N GQ C A VH S+ D+F+E A A+K G+ K
Sbjct: 224 VDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIE-ALKEAIKEFFGEDPK 282
Query: 214 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 273
++ +++ + I+ D G K+ GGE + + Y+ PT+ D +
Sbjct: 283 KSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE-VDIENKYVAPTIIVNPDLDSPLM 338
Query: 274 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-- 331
++EIFGP+ IL Y+++DEV++ N+ LA F + ++ G+V IN
Sbjct: 339 QEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDC 398
Query: 332 CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
F + + +PFGG SG G G Y + K V+
Sbjct: 399 VFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 2e-56
Identities = 119/371 (32%), Positives = 177/371 (47%), Gaps = 25/371 (6%)
Query: 7 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
RYYA + G + E GV I PWNFPL +F ++ ALA GNT+
Sbjct: 143 RYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTV 191
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 126
+ K AEQT L A +L+ EAG P G + ++ G G GAAL S + +AFTGST
Sbjct: 192 IAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEV 251
Query: 127 GKIVLQLAAKSNLKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
+++ Q A+ PV L E GG++ IV A ++ + F + GQ C A
Sbjct: 252 AQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRV 311
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--- 241
V E V D+ + + VG P GP ID+E + +L +I
Sbjct: 312 LCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKI 371
Query: 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNA 299
A+L R G ++ PT+F DD+ +E+FGPV +++YK +LD+++ + N
Sbjct: 372 AQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQ 429
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG-REKG 355
+ YGL GV + T + + RVG+ ++N + A + PFGG SG G + G
Sbjct: 430 TGYGLTMGVHSRIETTYRWIEKHARVGNCYVN-RNQVGAVVGVQPFGGQGLSGTGPKAGG 488
Query: 356 SYSLSNYLQVK 366
+ L QV+
Sbjct: 489 PHYLYRLTQVQ 499
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 2e-55
Identities = 112/344 (32%), Positives = 169/344 (49%), Gaps = 18/344 (5%)
Query: 33 HEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLHEA 88
+ P+G I+PWNFPL W+V P L GN +LK A A ++++ +A
Sbjct: 124 YRPLGTILAIMPWNFPL----WQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDA 179
Query: 89 GLPPGVLNIVSGYGPTAGAALASHMEVDK----LAFTGSTTTGKIVLQLAAKSNLKPVTL 144
G+P GV ++ A S M D + TGS G + A + LK L
Sbjct: 180 GIPQGVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVL 233
Query: 145 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 204
ELGG PFIV DAD++ A + A + N GQ C A R + E + F E+ A A
Sbjct: 234 ELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAA 293
Query: 205 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 264
+GDP GP + +++ + + + GA+L GGE++ G Y PTV
Sbjct: 294 ALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLA 353
Query: 265 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 324
V +M ++E+FGPV +I KD + ++ +N S++GL+A +FT + A + L
Sbjct: 354 NVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLE 413
Query: 325 VGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368
G V+IN + DA + FGG K+SG GRE + L + ++ V
Sbjct: 414 CGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 3e-53
Identities = 136/369 (36%), Positives = 192/369 (52%), Gaps = 41/369 (11%)
Query: 7 RYYAGWADKIQG----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 62
RYYA A ++ G L P G + LH GV I PWNFPL +F +V ALA
Sbjct: 654 RYYAAQARRLFGAPEKLPGP-TGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAA 711
Query: 63 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 122
GNT++ K AEQTPL A KLLHEAG+P VL ++ G G T GAAL + + +AFTG
Sbjct: 712 GNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTG 771
Query: 123 STTTGKIVLQ-LAAKSNLKPVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYA 170
ST T +I+ + LAA+ V L E GG++ IV D+ DV +A
Sbjct: 772 STETARIINRTLAARDG-PIVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA------ 822
Query: 171 LFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 229
F + GQ C A FV E + D+ +E A+A + VGDP GP ID+E
Sbjct: 823 -FRSAGQRCSALRVLFVQEDIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAEAKAN 880
Query: 230 ILKYIRSGVDGGAKL--ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 287
+ +I + A+L + G+++ PT F D + + E+FGP+ +++Y
Sbjct: 881 LDAHIER-MKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRY 937
Query: 288 K--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PF 342
K DLD+VI NA+ YGL G+ + +TA+ + +RVG+V++N + A + PF
Sbjct: 938 KASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVN-RNQIGAVVGVQPF 996
Query: 343 GGYKQSGQG 351
GG SG G
Sbjct: 997 GGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 5e-53
Identities = 127/367 (34%), Positives = 182/367 (49%), Gaps = 27/367 (7%)
Query: 7 RYYAGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RYYAG A D LT H P+G I PWNFPL +F ++ ALA GN+
Sbjct: 219 RYYAGQARDTFGNLT------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS 266
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
++ K AEQTPL A +LLHEAG+PPGVL ++ G G T GAAL + V + FTGST
Sbjct: 267 VLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTE 326
Query: 126 TGKIVLQLAAKSNLKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
+++ + AK +P+ L E GG++ IV A ++ + F + GQ C A
Sbjct: 327 VARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALR 386
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGA 242
+ E V D+ + + VG+P + GP ID+E I K+I G
Sbjct: 387 VLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRL 446
Query: 243 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNAS 300
+ KG ++ PT+ D L + E+FGPV +++YK +LDEVI + NA+
Sbjct: 447 VHQAAAPNSLQKGTFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQINAT 504
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSY 357
YGL GV T +T + G++++N ++ A + PFGG SG G + G
Sbjct: 505 GYGLTLGVHTRIDETIAHVTERAHAGNLYVN-RNIVGAVVGVQPFGGEGLSGTGPKAGG- 562
Query: 358 SLSNYLQ 364
YL
Sbjct: 563 --PLYLL 567
|
Length = 769 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-52
Identities = 123/336 (36%), Positives = 166/336 (49%), Gaps = 29/336 (8%)
Query: 33 HEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 91
EP+GV I WN+PL L VG A+A GN +V+K +E +P +A KLL E L
Sbjct: 98 KEPLGVVLIIGAWNYPLQLTLVPLVG-AIAAGNCVVIKPSEVSPATA----KLLAE--LI 150
Query: 92 PGVLN-----IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 146
P L+ +V G G L D + +TGST+ GKIV+Q AAK +L PVTLEL
Sbjct: 151 PKYLDKECYPVVLG-GVEETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLEL 207
Query: 147 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 206
GGKSP V + D+D AA + F N GQ C A V ++FVE +K
Sbjct: 208 GGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK-TLKE 266
Query: 207 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 266
G+ K G I+ F+++ K + G K+ GG+ K YI PTV T V
Sbjct: 267 FYGEDPKESPDYGRIINDRHFQRLKKLLSGG-----KVAIGGQ-TDEKERYIAPTVLTDV 320
Query: 267 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 326
K + ++EIFGP+ I+ +LDE I+ N+ + LA VF++N N ++ G
Sbjct: 321 KPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSG 380
Query: 327 SVWINCFDVFDAAI----PFGGYKQSGQGREKGSYS 358
V +N D PFGG SG G G YS
Sbjct: 381 GVCVN--DTIMHYTLDSLPFGGVGNSGMGAYHGKYS 414
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 4e-51
Identities = 116/374 (31%), Positives = 188/374 (50%), Gaps = 29/374 (7%)
Query: 8 YYAGWADKIQGLTAPADGPYHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
+ G + ++ G P++ P H+ + P+G+ G I +NFP + W AL CGN +
Sbjct: 126 FAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCV 185
Query: 67 VLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 122
V K A TPL + ++KL L + LP + G G G A+A + ++FTG
Sbjct: 186 VWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTG 244
Query: 123 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182
S+ G +V Q + LEL G + IV +DAD+ A +A GQ C
Sbjct: 245 SSKVGLMV-QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTC 303
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP---QIDSEQFEKILKYIRSGVD 239
R +HES+YD +E+ + + +GDP + G GP + FEK ++ I+S
Sbjct: 304 RRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS--- 360
Query: 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
G K+ TGG + ++G +++PT+ + D + K+E+FGPV ++K+K L+E I+ +N+
Sbjct: 361 QGGKILTGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNS 419
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP---------FGGYKQSGQ 350
GL++ +FT N +T +G + +C + + IP FGG K +G
Sbjct: 420 VPQGLSSSIFTRNPETIFKW-----IGPLGSDC-GIVNVNIPTNGAEIGGAFGGEKATGG 473
Query: 351 GREKGSYSLSNYLQ 364
GRE GS S Y++
Sbjct: 474 GREAGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 5e-51
Identities = 121/352 (34%), Positives = 174/352 (49%), Gaps = 25/352 (7%)
Query: 35 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 94
P+GV I P+N+P+ + K+ PAL GN +VLK Q ++AL++ H AG P G+
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217
Query: 95 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 154
++ V+G G G L H V+ ++FTG T + ++ K+ + P+ +ELGGK IV
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIV 273
Query: 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 214
EDAD+D AA F GQ C A V ESV D VEK NA K VG P
Sbjct: 274 LEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP--- 330
Query: 215 GIQQGPQIDSEQFEKILKYIRSGVDG----GAKLETGGERLGAKGYYIKPTVFTGVKDDM 270
+ I E +I V GA +R +G I P + V+ DM
Sbjct: 331 --EDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDM 385
Query: 271 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 330
IA +E FGPV +++ ++E I NAS +GL VFT +++ A + A+ G+V I
Sbjct: 386 RIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQI 445
Query: 331 NCF-----DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 377
N D F PF G K SG G + + S++ +VK+ V L P++
Sbjct: 446 NSAPARGPDHF----PFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493
|
Length = 496 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 2e-50
Identities = 114/355 (32%), Positives = 165/355 (46%), Gaps = 22/355 (6%)
Query: 29 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA 88
V ++ +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P +A+ +++L EA
Sbjct: 130 VYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEA 189
Query: 89 GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 148
G P GVLN+V G A L H +V ++F GST G+ + + K V G
Sbjct: 190 GAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHG-KRVQALGGA 247
Query: 149 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 208
K+ +V DAD D AA+ A + GQ C A S V D++V + A K +
Sbjct: 248 KNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVPEIRERAEKIRI 306
Query: 209 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY----YIKPTVFT 264
G G + GP I + +++ I G GA++ G GY ++ PT+
Sbjct: 307 GPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLE 366
Query: 265 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 324
V M ++EIFGPV +L+ L+E I NAS YG +FT + A +
Sbjct: 367 RVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIE 426
Query: 325 VGSVWINCFDVFDAAIP-------FGGYKQS--GQGREKGSYSLSNYLQVKAVVT 370
VG V +N IP F G+K S G G Y + K V T
Sbjct: 427 VGQVGVN------VPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 2e-49
Identities = 119/375 (31%), Positives = 176/375 (46%), Gaps = 66/375 (17%)
Query: 7 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
RYYA Q H+P+G I PWNFPL +F ++ AL GNT+
Sbjct: 659 RYYAA-----QARRLLNGPG------HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTV 707
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 126
+ K AEQTPL A +LLHEAG+P L ++ G G T GAAL + + + FTGST
Sbjct: 708 LAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEV 767
Query: 127 GKIVLQLAAKSNLKPVTL--ELGGKSPFIVCED---------ADVDKAAELAHYALFFNQ 175
+++ + AK + PV L E GG++ IV D ADV +A F +
Sbjct: 768 ARLIQRTLAKRSGPPVPLIAETGGQNAMIV--DSSALPEQVVADVIASA-------FDSA 818
Query: 176 GQCCCAGSRTFVHESVYDQFVEKANAL--AMK-RVVGDPFKGGIQQGPQIDSEQFEKILK 232
GQ C A + E V D+ + L AM +GDP++ GP ID+E I
Sbjct: 819 GQRCSALRVLCLQEDVADRVLT---MLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEA 875
Query: 233 YIRSGVDGGAKLETGGERL--------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQ 282
+I + G + KG ++ PT+ + D+ + E+FGPV
Sbjct: 876 HI-------EAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-IDSISDL---EREVFGPVL 924
Query: 283 SILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI 340
++++K +LD VI NA+ YGL G+ + +T + +R G++++N + A+
Sbjct: 925 HVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNII--GAV 982
Query: 341 ----PFGGYKQSGQG 351
PFGG SG G
Sbjct: 983 VGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 8e-47
Identities = 107/329 (32%), Positives = 163/329 (49%), Gaps = 17/329 (5%)
Query: 33 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 92
H P GV P+NFP + + PAL GNT+V K +E TP A KL +AGLP
Sbjct: 132 HRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPA 191
Query: 93 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 152
GVLN+V G G G ALA+H ++D L FTGS TG ++ + A K + LE+GG +P
Sbjct: 192 GVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPL 250
Query: 153 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP 211
++ E AD+D A L + F + GQ C R V + D F+ + A+A + VG
Sbjct: 251 VIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRW 310
Query: 212 FKGGIQQ-----GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF--T 264
+ G I + + ++ + G K +L A + P + T
Sbjct: 311 D----AEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVT 366
Query: 265 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 324
GV + + +E FGP+ +++Y D DE I+ +N +++GL+AG+ + + + + + +R
Sbjct: 367 GVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIR 423
Query: 325 VGSV-WINCFDVFDAAIPFGGYKQSGQGR 352
G V W +A PFGG SG R
Sbjct: 424 AGIVNWNKPLTGASSAAPFGGVGASGNHR 452
|
Length = 487 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 6e-46
Identities = 110/336 (32%), Positives = 165/336 (49%), Gaps = 19/336 (5%)
Query: 33 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 92
H P GV P+NFP + + PAL GNT+V K +E TP A KL +AGLP
Sbjct: 130 HRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPA 189
Query: 93 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 152
GVLN+V G G ALA+H ++D L FTGS+ TG ++ + A K + LE+GG +P
Sbjct: 190 GVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPL 248
Query: 153 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGD- 210
IV E AD+D A L + F + GQ C R V + D F+ + +A + VG
Sbjct: 249 IVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAW 308
Query: 211 -----PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF-- 263
PF G + I + +++L + G K +L + P +
Sbjct: 309 DAEPQPFMGAV-----ISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDV 363
Query: 264 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 323
TGV + + +E FGP+ +++Y D DE I +N +++GL+AG+ + + + + + +
Sbjct: 364 TGVAE---LPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEI 420
Query: 324 RVGSV-WINCFDVFDAAIPFGGYKQSGQGREKGSYS 358
R G V W +A PFGG SG R Y+
Sbjct: 421 RAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYA 456
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 162 bits (410), Expect = 1e-44
Identities = 121/354 (34%), Positives = 174/354 (49%), Gaps = 16/354 (4%)
Query: 31 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 90
++ EP+GV I P+NFP ++ W A+ CGNT +LK +E+ P +++ +++L EAGL
Sbjct: 245 SIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGL 304
Query: 91 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 150
P GVLNIV G T A+ ++ ++F GS T G + AA K + +G K+
Sbjct: 305 PDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KRIQSNMGAKN 362
Query: 151 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFVEKANALAMKRV 207
+V DA++D A F GQ C A S FV + S D+ VE+A AL K
Sbjct: 363 HGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKAL--KVT 420
Query: 208 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY----YIKPTVF 263
G + GP I + E+I + I+SGVD GAKL G + GY +I PT+
Sbjct: 421 CGSEPDADL--GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTIL 478
Query: 264 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 323
+GV DM K+EIFGPV ++ DE I N ++YG A +FT + A +
Sbjct: 479 SGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDI 538
Query: 324 RVGSVWINC-FDVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQVKAVVTALKN 374
G + IN V F G K S G G + + Q+K V K+
Sbjct: 539 EAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKD 592
|
Length = 604 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 160 bits (408), Expect = 1e-44
Identities = 117/398 (29%), Positives = 171/398 (42%), Gaps = 67/398 (16%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQ------------IIPWNF------ 47
R+ +A+++ Y Q L P GV + + P+NF
Sbjct: 139 LRFNVKYAEEL----------YAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188
Query: 48 ----PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 103
P LM GN ++ K ++ LS V K+L EAGLPPGV+N V G GP
Sbjct: 189 LAGAPALM-----------GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGP 237
Query: 104 TAGAALASHMEVDKLAFTGSTTT-----GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158
G + + + L FTGST T +I L + E GGK+ +V A
Sbjct: 238 VVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSA 297
Query: 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 218
DVD F QGQ C A SR +V ES++ + E+ + +GDP
Sbjct: 298 DVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFM 357
Query: 219 GPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKD 275
G ID + F++I YI + D A++ GG+ + GY+++PTV T K ++ +
Sbjct: 358 GAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TE 415
Query: 276 EIFGPVQSILKYKD--LDEVIQR-SNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWI 330
EIFGPV ++ Y D +E ++ S Y L +F + ALR G+ +I
Sbjct: 416 EIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYI 475
Query: 331 NCFDVFDAAI----PFGGYKQSGQGREKGSYSLSNYLQ 364
N D A+ PFGG + SG + GS L
Sbjct: 476 N--DKPTGAVVGQQPFGGARASGTNDKAGS---PLNLL 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 5e-44
Identities = 112/358 (31%), Positives = 163/358 (45%), Gaps = 30/358 (8%)
Query: 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 85
P + + EP+GV I WNFP L+ V A+A GN +VLK +E P ++ ++KL+
Sbjct: 92 PAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI 151
Query: 86 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 145
L + ++ G G AL + DK+ FTGS G+I++ AAK +L PVTLE
Sbjct: 152 -PEYLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLE 207
Query: 146 LGGKSPFIVCEDADVDKAAE---LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 202
LGGK P IV D+ A + N GQ C A V ES ++
Sbjct: 208 LGGKCPVIVDSTVDLKVAVRRIAGGKWGC--NNGQACIAPDYVLVEESFAPTLID----- 260
Query: 203 AMKRVVGDPF-KGGIQQG--PQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 259
A+K + F + + +I + + L + K+ GGER K YI+
Sbjct: 261 ALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGER-DEKNLYIE 319
Query: 260 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319
PT+ D I +EIFGP+ I+ K ++E I+ N+ LAA VFT N + +
Sbjct: 320 PTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRI 379
Query: 320 MRALRVGSVWINCFDVFDAAI-------PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370
+ G V N D + PFGG +SG G G +S + KAV+
Sbjct: 380 VAETSSGGVTFN-----DTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 153 bits (387), Expect = 1e-41
Identities = 113/366 (30%), Positives = 168/366 (45%), Gaps = 16/366 (4%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGN 64
FR+ A +A ++ + +T + P+ G I P+NF + PAL GN
Sbjct: 139 FRFNAKYARELYEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GN 197
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T++ K ++ LS V ++L EAGLPPGV+N V G GP + + ++ + FTGST
Sbjct: 198 TVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGST 257
Query: 125 TT-----GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
T ++ L N + E GGK +V ADV+ F QGQ C
Sbjct: 258 PTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKC 317
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
A SR +V S++ +F + A + VGDP G G ID + F KI+KYI
Sbjct: 318 SACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKS 377
Query: 240 GGAKLET--GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQ 295
+ L GG+ + GY+++PTV + K+EIFGPV ++ Y D E++
Sbjct: 378 DPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILD 437
Query: 296 R-SNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWIN--CFDVFDAAIPFGGYKQSGQ 350
+ + YGL VF + D + LR G+ +IN PFGG + SG
Sbjct: 438 LVDSTTSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASGT 497
Query: 351 GREKGS 356
+ G
Sbjct: 498 NDKAGG 503
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-40
Identities = 116/350 (33%), Positives = 170/350 (48%), Gaps = 44/350 (12%)
Query: 33 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 92
H P+G I PWNFPL +F +V ALA GN+++ K AEQTPL A ++L EAG+P
Sbjct: 766 HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPA 825
Query: 93 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLEL 146
GV+ ++ G G T GAAL + V + FTGST ++ LQ L + P+ E
Sbjct: 826 GVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAET 884
Query: 147 GGKSPFIVCEDA-------DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 199
GG++ IV A DV +A F + GQ C A + + V D+
Sbjct: 885 GGQNAMIVDSSALTEQVVADVLASA-------FDSAGQRCSALRVLCLQDDVADR----- 932
Query: 200 NALAMKR------VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK---LETGGER 250
L M R +G+P + GP ID+E I ++I++ G
Sbjct: 933 -TLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSE 991
Query: 251 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGV 308
G ++ PT+ D L K E+FGPV +++Y LDE+I++ NAS YGL GV
Sbjct: 992 DWQSGTFVPPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGV 1049
Query: 309 FTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 355
T +T + + VG++++N ++ A + PFGG SG G + G
Sbjct: 1050 HTRIDETIAQVTGSAHVGNLYVN-RNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 135 bits (340), Expect = 2e-35
Identities = 106/361 (29%), Positives = 166/361 (45%), Gaps = 10/361 (2%)
Query: 12 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 71
W + T+ P + + EP+GV I WN+P L+ V A++ GN +VLK +
Sbjct: 89 WMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPS 148
Query: 72 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 131
E P S+ ++KLL E L + +V G A L + DK+ +TGS+ G++++
Sbjct: 149 ELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTALL--EQKWDKIFYTGSSKIGRVIM 205
Query: 132 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FNQGQCCCAGSRTFVHES 190
AAK +L PV LELGGKSP +V D D+ + N GQ C + +
Sbjct: 206 AAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKE 264
Query: 191 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 250
+ ++ A ++ G ++S F+++ K + + K+ GGE+
Sbjct: 265 YAPKVID-AMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK 322
Query: 251 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 310
+ I PT+ V D LI +EIFGP+ IL +L+E + LAA +FT
Sbjct: 323 -DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFT 381
Query: 311 HNLDTANTLMRALRVGSVWINCFDVFDA--AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368
HN + G + +N V A +PFGG +SG G G +S + KAV
Sbjct: 382 HNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
Query: 369 V 369
+
Sbjct: 442 L 442
|
Length = 484 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 5e-31
Identities = 104/367 (28%), Positives = 164/367 (44%), Gaps = 45/367 (12%)
Query: 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 85
P + + EP+GV WNFP+ + + A+A GN +VLK +E P ++ +++ +
Sbjct: 99 PATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI 158
Query: 86 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 145
L + ++ G GP G L H + DK+ FTGS G+I++ AAK +L PV LE
Sbjct: 159 -PKYLDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALE 214
Query: 146 LGGKSPFIV-CEDADVDK--------AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 196
LGGK P IV + D + A GQ C A V E +
Sbjct: 215 LGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCA-----GQACIAIDYVLVEERFAPILI 269
Query: 197 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR------SGVDGGAKLETGGER 250
E + +K+ G+ + ++ + F+++ ++ S V GG+
Sbjct: 270 ELLKST-IKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS-------- 320
Query: 251 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 310
+ K +I+PT+ D I +EIFGP+ I+ K +++ I N+ LA FT
Sbjct: 321 IDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFT 380
Query: 311 HNLDTANTLMRALRVGSVWINCFDVFDA-------AIPFGGYKQSGQGREKGSYSLSNYL 363
+N ++ GSV N DA ++PFGG +SG GR G YS +
Sbjct: 381 NNEKLKRRILSETSSGSVTFN-----DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFS 435
Query: 364 QVKAVVT 370
KAV+
Sbjct: 436 HEKAVLR 442
|
Length = 484 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 6e-26
Identities = 81/324 (25%), Positives = 134/324 (41%), Gaps = 31/324 (9%)
Query: 6 FRYYAGWADKIQGLTAPAD--GPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPAL 60
R A + P + G Q H P G I +NFPL + ++ AL
Sbjct: 66 LRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGAL 125
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
A GN +++K + + +LLH AG LPP + +++G G T AL H +
Sbjct: 126 AMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPNPKMVL 184
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQC 178
FTGS+ + +LA + + LEL G + ++ DA VD A + GQ
Sbjct: 185 FTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQK 241
Query: 179 CCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237
C A S FV E+ VEK AL +R + D G +Q + ++ ++ +
Sbjct: 242 CTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ------TFTTLAMIAHMEN- 294
Query: 238 VDGGAKLETGGERLGAK------GYYIKPTVFTGVKDDMLIAK---DEIFGPVQSILKYK 288
G+ L G+ L G + +F + + + + +EIFGP +++YK
Sbjct: 295 -LLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYK 353
Query: 289 DLDE--VIQRSNASQYGLAAGVFT 310
V++ L A +++
Sbjct: 354 KDQLALVLELLERMHGSLTAAIYS 377
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 92/315 (29%), Positives = 127/315 (40%), Gaps = 44/315 (13%)
Query: 37 GVAGQIIPWNFPLLMFAW----KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LP 91
GVA I +NFP W K PAL G +++K A T V K + E+G LP
Sbjct: 146 GVAVHINAFNFP----VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLP 201
Query: 92 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK----PVTLELG 147
G L ++ G + G L E D +AFTGS T +L A N+ E
Sbjct: 202 EGALQLICG---SVGDLLDHLGEQDVVAFTGSAATAA---KLRAHPNIVARSIRFNAEAD 255
Query: 148 GKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 198
+ I+ DA + LF + GQ C A R FV E+ D +E
Sbjct: 256 SLNAAILGPDATPGTPE----FDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEA 311
Query: 199 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI---RSG---VDGGAKLETGGERLG 252
A K VVGDP G++ GP + EQ E + + + V GG
Sbjct: 312 LKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADA 371
Query: 253 AKGYYIKPTVFTGVKDDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 308
KG + PT+ DD A E FGPV +++ Y L E I+ + + L A V
Sbjct: 372 EKGAFFPPTLLLC--DDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASV 429
Query: 309 FTHNLDTANTLMRAL 323
T++ A L+
Sbjct: 430 VTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 1e-22
Identities = 90/343 (26%), Positives = 139/343 (40%), Gaps = 59/343 (17%)
Query: 8 YYAGWADKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAW--- 54
YYA + DG + Q + P GVA I +NFP AW
Sbjct: 111 YYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP----AWGLW 166
Query: 55 -KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH 112
K PAL G +++K A T + K + AG LP G L++V G + A L H
Sbjct: 167 EKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDH 222
Query: 113 M-EVDKLAFTGSTTTGKI------VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 165
+ D ++FTGS T + V+Q + + N++ +L ++ DA A
Sbjct: 223 LQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAPGSEA- 276
Query: 166 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 216
+ LF + GQ C A R FV E++YD E A K VG+P G+
Sbjct: 277 ---FDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGV 333
Query: 217 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDM 270
+ GP + Q + + + + A++ G A + PT+ G D
Sbjct: 334 RMGPLVSRAQLAAVRAGL-AALRAQAEVLFDGGGFALVDADPAVAACVGPTLL-GASDPD 391
Query: 271 ---LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 310
+ E+FGPV ++L Y+D + + Q L A V++
Sbjct: 392 AATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYS 434
|
Length = 521 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 8e-21
Identities = 101/371 (27%), Positives = 156/371 (42%), Gaps = 35/371 (9%)
Query: 24 DGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 82
DG + + + P GVA QI +NFP+ K PA G + K A T A +
Sbjct: 132 DGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALV 191
Query: 83 KLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK- 140
+ + E+GL P G L ++ G +AG L D +AFTGS T +L A N+
Sbjct: 192 RTMVESGLLPEGSLQLICG---SAGDLLDHLDHRDVVAFTGSAATAD---RLRAHPNVLE 245
Query: 141 ---PVTLELGGKSPFIVCEDADVDKAAELAHYA------LFFNQGQCCCAGSRTFVHESV 191
E + I+ EDA D+ E +A L GQ C A R V +++
Sbjct: 246 RGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIKAGQKCTAIRRVIVPKAL 304
Query: 192 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-ER 250
+ ++ A K V+GDP + G+ GP + EQ + + + + GA++ GG R
Sbjct: 305 LEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR 364
Query: 251 LGAKGYYIKPTVFTGVKDDMLIAKD-EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 309
L G + PT+ E FGPV + Y D E + + L A +
Sbjct: 365 L--DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLA 422
Query: 310 THNLDTANTLMRALRVGSVWINCFDVFDAA--------IP---FGGYKQSGQGREKGSY- 357
T + + A + L ++ + DAA +P GG ++G G E G
Sbjct: 423 TSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLR 482
Query: 358 SLSNYLQVKAV 368
S+ +Y+Q A+
Sbjct: 483 SVKHYMQRTAI 493
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 3e-19
Identities = 92/316 (29%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 37 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVL 95
GVA I +NFP+ K+ PA G ++K A T V +L+ E+G LP G L
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209
Query: 96 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155
++ G +AG L D + FTGS T + +L A N+ + PF
Sbjct: 210 QLICG---SAGDLLDHLDGQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA- 256
Query: 156 EDAD--------VDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 198
+AD D + LF + GQ C A R V ++ D +E
Sbjct: 257 -EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315
Query: 199 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA- 253
A K VVGDP G++ G EQ E + + + + + A++ GG E +GA
Sbjct: 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGAD 374
Query: 254 --KGYYIKPTVFTGVKDDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 307
KG + PT+ DD L A E FGPV +++ Y DLDE I+ + + L A
Sbjct: 375 AEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVAS 432
Query: 308 VFTHNLDTANTLMRAL 323
+ T + + A L+
Sbjct: 433 LVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 4e-15
Identities = 76/311 (24%), Positives = 112/311 (36%), Gaps = 42/311 (13%)
Query: 46 NFPLLMFAWKVG-----PALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPPG 93
NFP A+ V ALA G +V+K T+E L A + L GLP G
Sbjct: 116 NFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPAG 169
Query: 94 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSPF 152
V +++ G G G AL H + + FTGS G+ + AA P ELG +P
Sbjct: 170 VFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPV 229
Query: 153 IVCEDADVDKAAELA---HYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVV 208
+ A ++ +A +L GQ C V D F+
Sbjct: 230 FILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA 289
Query: 209 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 268
GI + + E + G L G G PT+F V
Sbjct: 290 QTMLTPGIAEAYRQGVEA--------LAAAPGVRVLAGGAAAEGGNQA--APTLFK-VDA 338
Query: 269 DMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLMRA 322
+A E+FGP +++Y D E++ + A + L A + L A L+
Sbjct: 339 AAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPV 398
Query: 323 L--RVGSVWIN 331
L + G + N
Sbjct: 399 LERKAGRLLFN 409
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-15
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 27/290 (9%)
Query: 35 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 94
P G I P+NFPL + A ++ AL GN +LK + + +LLH G+P
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATD 201
Query: 95 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 154
++++ GPT L FTGS+ K+ +LA + + K V LE G I+
Sbjct: 202 VDLIHSDGPTMNKIL-LEANPRMTLFTGSS---KVAERLALELHGK-VKLEDAGFDWKIL 256
Query: 155 CED-ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPF 212
D +DVD A + GQ C A S F HE+ ++K ALA +R + D
Sbjct: 257 GPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-- 314
Query: 213 KGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAK------GYYIKPTVFTG 265
+ GP + + E+IL ++ + GAK+ GG+ L G Y VF
Sbjct: 315 ---LTIGP-VLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVP 370
Query: 266 VKDDML-----IAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGV 308
+++ + + E+FGP Q + +YKD L V++ L A V
Sbjct: 371 LEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAV 420
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 9e-11
Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 14/197 (7%)
Query: 7 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
R IQ + P +G +V+ PIGV I+P PL +A N
Sbjct: 74 RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQC 130
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHMEVDKLAFTG 122
+ + P + LL +A I+ Y P LA SH ++D + TG
Sbjct: 131 IFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG 189
Query: 123 STTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
G+ + A K S PV G SP +V E AD ++A+ H + FF+Q C +
Sbjct: 190 ----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244
Query: 182 GSRTFVHESVYDQFVEK 198
+V + V D E+
Sbjct: 245 EQNLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 5e-06
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 9/179 (5%)
Query: 24 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSAL 79
D + EPIGV I P P +K +L N+I+ + + T +A
Sbjct: 84 DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143
Query: 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 139
+ + AG P ++ + L + L TG K AA S+
Sbjct: 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSG 198
Query: 140 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 198
KP G +P ++ E AD+ +A + + F+ G C + V +SVYD+ +
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 1e-04
Identities = 69/325 (21%), Positives = 126/325 (38%), Gaps = 56/325 (17%)
Query: 34 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSALYVSKLLHEAG 89
EP+GV +IP P +K AL N I+ + + + +A + + AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 90 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-- 147
P G++ + L H +VD + TG K AA S+ KP +G
Sbjct: 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK-----AAYSSGKPA---IGVG 205
Query: 148 -GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 206
G P + E AD+ +A + + F+ G C + V + +YD+ +KR
Sbjct: 206 PGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA-----ELKR 260
Query: 207 VVGDPFKGGIQQGPQI-DSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI------- 258
+G + E+ EK+ K + D G L + +G I
Sbjct: 261 -----------RGAYFLNEEEKEKLEKAL---FDDGGTLN--PDIVGKSAQKIAELAGIE 304
Query: 259 --KPTVF-----TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLA---AG 307
+ T TGV + +++ E PV + + +D +E ++++ +YG A A
Sbjct: 305 VPEDTKVLVAEETGVGPEEPLSR-EKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAV 363
Query: 308 VFTHNLDTANTLMRALRVGSVWINC 332
+ +++ + + V + +N
Sbjct: 364 IHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 32/194 (16%)
Query: 45 WN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVS---KLLHEAGLPPGVLNIVS 99
WN +P L FA +LA GN +++K L AL V ++L EAG P ++ + +
Sbjct: 208 WNTYPGL-FA-----SLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAA 261
Query: 100 GYGPTAGAA--LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157
+ P AA LA+ V + FTGS G+ + Q A ++ V E G + I+
Sbjct: 262 -FDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQ---VYTEKAGVNTVIIEST 317
Query: 158 ADVDKAAELAHYALFFNQGQCCCA---------GSRTFVHESVYDQFVEKANALAMKRVV 208
D ++L GQ C G RT YD+ V A A+ ++
Sbjct: 318 DDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLL 376
Query: 209 GDPFK-----GGIQ 217
GDP + G IQ
Sbjct: 377 GDPARATAVLGAIQ 390
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 74/318 (23%), Positives = 123/318 (38%), Gaps = 54/318 (16%)
Query: 31 TLHE--PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA 88
TL E P GV G I P P LA GN +V + Y +L+++A
Sbjct: 91 TLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA 150
Query: 89 ----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 144
G P ++ V L +H +++ L TG G V++ A S K +
Sbjct: 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKAI-- 204
Query: 145 ELG---GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 201
G G P +V E AD++KAA F+ C A +SV D +
Sbjct: 205 --GAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIA---- 258
Query: 202 LAMKRVVGDPFKGGIQQGPQIDSEQFEKIL--------------KYIRSGVDGGAKLETG 247
AM+R ++ EQ E++L K++ G D L+
Sbjct: 259 -AMQR----------NGAYVLNDEQAEQLLEVVLLTNKGATPNKKWV--GKDASKILKAA 305
Query: 248 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--A 305
G + A I+ + KD + +E P+ +++ K+ DE I+ + ++G
Sbjct: 306 GIEVPAD---IRLIIVETDKDHPFVV-EEQMMPILPVVRVKNFDEAIELAVELEHGNRHT 361
Query: 306 AGVFTHNLDTANTLMRAL 323
A + + N++ + RA+
Sbjct: 362 AIIHSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.97 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.85 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.79 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.53 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.52 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.74 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.79 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.75 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.7 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.66 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.65 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.61 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.55 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.54 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.11 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.9 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 91.64 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 84.06 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-92 Score=670.20 Aligned_cols=376 Identities=64% Similarity=1.055 Sum_probs=367.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.+|||+.|++..++..++.......+++++|+|||+.|.|||||+....|+++|||++||++|+||++.+|+|+..+
T Consensus 125 ~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~ 204 (501)
T KOG2450|consen 125 AIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYL 204 (501)
T ss_pred hhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHH
Confidence 67889999999999988888877888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++|+|.|...+.+|.+|++++.|+||||+.+|+.|.+.+++.++||+.+|+|||+|.||++|+|++
T Consensus 205 ~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld 284 (501)
T KOG2450|consen 205 ASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLD 284 (501)
T ss_pred HHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecccchH
Confidence 99999999999999999999999999999999999999999999999999999987899999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhh-cccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
.|++.+..+.|+|+||+|++.+|+|||+++||+|+++++++.++ +++|+|+|+.+.+||.+++.|++|++.||+.++++
T Consensus 285 ~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~e 364 (501)
T KOG2450|consen 285 LAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKE 364 (501)
T ss_pred HHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999966 99999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++.+||.+..+.|+|+.|||+.++.++|.+++||+||||++|++|++.||+|+++|+++|||++.|||+|.+++++++
T Consensus 365 Ga~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va 444 (501)
T KOG2450|consen 365 GATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVA 444 (501)
T ss_pred CCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHH
Confidence 99999999887778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCC
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 377 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~~~ 377 (378)
+++++|+||||++..++...||||+|+||+|++.|.+++.+|++.|+++++.+++.|
T Consensus 445 ~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 445 NALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKLPQKNS 501 (501)
T ss_pred HHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999988876
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=669.50 Aligned_cols=377 Identities=86% Similarity=1.396 Sum_probs=358.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+.++++..++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 162 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l 241 (538)
T PLN02466 162 FARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYA 241 (538)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHH
Confidence 56788999999988877765533344568999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++|+|+|++|+++|.+.+.+..|++||++|.|.||||+++|+.|++.+++.+++|+++|+|||||+||++|||++
T Consensus 242 ~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~ 321 (538)
T PLN02466 242 AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD 321 (538)
T ss_pred HHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHH
Confidence 99999999999999999997778899999999999999999999999999988854789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++++|||++++|+|+++|.+++.++++|+|.|+++++||+++.++++++++++++++++|
T Consensus 322 ~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~G 401 (538)
T PLN02466 322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESG 401 (538)
T ss_pred HHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||+..+..|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 402 a~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~ 481 (538)
T PLN02466 402 ATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSR 481 (538)
T ss_pred CEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 99999998655568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 378 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~~~~ 378 (378)
++++|.|+||+++..++.+||||+|.||+|+++|.+|+++|++.|++.+.+++|.|+
T Consensus 482 ~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~~ 538 (538)
T PLN02466 482 ALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538 (538)
T ss_pred hCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCCC
Confidence 999999999998777788999999999999999999999999999999999999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=662.94 Aligned_cols=369 Identities=39% Similarity=0.669 Sum_probs=348.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++++..++..+. ..+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 112 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~ 191 (482)
T PRK11241 112 AASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 191 (482)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHH
Confidence 5678999999988776654443 223456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.+++.++|+|+|++++++|++.+.++.|++||++|.|+||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 192 l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~-~l~~~~lElGGknp~IV~~dADl 270 (482)
T PRK11241 192 LAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADL 270 (482)
T ss_pred HHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEcCCCCH
Confidence 99999999999999999999777889999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++++
T Consensus 271 d~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 350 (482)
T PRK11241 271 DKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEK 350 (482)
T ss_pred HHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 351 Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~ 430 (482)
T PRK11241 351 GARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVG 430 (482)
T ss_pred CCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999754346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++|.||||+.....+.+||||+|.||+|+++|.+|+++||+.|++.+.
T Consensus 431 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 431 EALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 999999999998766667789999999999999999999999999999764
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-86 Score=662.95 Aligned_cols=377 Identities=57% Similarity=0.969 Sum_probs=356.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++
T Consensus 125 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l 204 (501)
T PLN02766 125 AAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFY 204 (501)
T ss_pred HHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHH
Confidence 56789999999888777654433345578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.+++.++|+|+|+++++++++.+.+..|++||++|.|.||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++
T Consensus 205 ~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~ 284 (501)
T PLN02766 205 AHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVD 284 (501)
T ss_pred HHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHH
Confidence 99999999999999999997778899999999999999999999999999988844789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++.+++++++++|++++.+|
T Consensus 285 ~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G 364 (501)
T PLN02766 285 MAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREG 364 (501)
T ss_pred HHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++
T Consensus 365 a~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~ 444 (501)
T PLN02766 365 ATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSR 444 (501)
T ss_pred CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999997654568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 378 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~~~~ 378 (378)
++++|+|+||++...++.+||||+|.||+|+++|.+|+++|++.|++.+..-+-.|+
T Consensus 445 ~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~~~~~~ 501 (501)
T PLN02766 445 SIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNSPWL 501 (501)
T ss_pred hCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEeccccccC
Confidence 999999999998777788999999999999999999999999999999998777775
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-86 Score=654.77 Aligned_cols=368 Identities=50% Similarity=0.822 Sum_probs=349.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+..++++.+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 100 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l 179 (472)
T COG1012 100 AADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALAL 179 (472)
T ss_pred HHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHH
Confidence 57899999999998888764444467889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++|+++|.+.+.++.|+.||+++.|.||||+++|+.|++.+++ ++||+++|||||||+||++|||++
T Consensus 180 ~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~~k~~~lELGGk~p~IV~~dAdl~ 258 (472)
T COG1012 180 AELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-NLKPVTLELGGKSPAIVLEDADLD 258 (472)
T ss_pred HHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-cCCcEEEECCCCCCeEECCCCCHH
Confidence 9999999999999999999877799999999999999999999999999999986 899999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhh-cccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|++.|+++++||+++.+++++++++|++++++
T Consensus 259 ~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~ 337 (472)
T COG1012 259 AAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAE 337 (472)
T ss_pred HHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999 65 99999899999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|++++.||+ ... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.+++
T Consensus 338 G~~~~~Gg~-~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~ 415 (472)
T COG1012 338 GARLLAGGK-RPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVA 415 (472)
T ss_pred CCEEEeCCc-CCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 999999998 333 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 321 RALRVGSVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 321 ~~l~~g~v~vN~~~--~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|++..+..
T Consensus 416 ~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 416 RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred hcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 99999999999975 345778999999999999999999999999999988754
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-86 Score=602.48 Aligned_cols=370 Identities=41% Similarity=0.674 Sum_probs=353.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
...+++|||+.|.+++++..+.. ...+..+.++|+||+++|+|||||......+..+||++||+||+||++++|++++.
T Consensus 125 ~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLa 204 (503)
T KOG2451|consen 125 SAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALA 204 (503)
T ss_pred hHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHH
Confidence 35789999999999999886643 45677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCC---chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 81 VSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~---~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
++++.++||+|+|++|++.++ ..++++.|+.+|.++.|+||||+.+|+.++++++. ++|++.+||||+.|+||++|
T Consensus 205 la~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsas-tvKkvslELGGNAPfIVFdd 283 (503)
T KOG2451|consen 205 LAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSAS-TVKKVSLELGGNAPFIVFDD 283 (503)
T ss_pred HHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhh-hhhheehhhcCCCceEEecC
Confidence 999999999999999999963 45789999999999999999999999999999887 89999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||+|.|++..+.++|.++||.|.++.|+|||+++||+|+..|.++++++++|+.+|+++..||+++..+.++++.++++|
T Consensus 284 adld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DA 363 (503)
T KOG2451|consen 284 ADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDA 363 (503)
T ss_pred cCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 238 VDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
+++|+++++||+... -..+|++|||+.+++.+|.+..||+|||+.+|++|+|+||+++++|+++.||++|+||+|.++.
T Consensus 364 vsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~ 443 (503)
T KOG2451|consen 364 VSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRL 443 (503)
T ss_pred HhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHH
Confidence 999999999999544 3459999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
.+++++|++|.|-+|.--..+...||||+|+||+|++++++|+++|+..|.+++..
T Consensus 444 ~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~ 499 (503)
T KOG2451|consen 444 FRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGT 499 (503)
T ss_pred HHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeecC
Confidence 99999999999999987777889999999999999999999999999999999864
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-85 Score=637.80 Aligned_cols=370 Identities=35% Similarity=0.635 Sum_probs=350.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++...+...+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 116 (409)
T PRK10090 37 TADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 116 (409)
T ss_pred HHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 5788999999998877654332 234567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.+++.++|+|+|+++++++++.+.+..|++|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 117 l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADl 195 (409)
T PRK10090 117 FAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADL 195 (409)
T ss_pred HHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCH
Confidence 99999999999999999999777889999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCC-CccccccCCHHHHHHHHHHHHHhhh
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|.++ ++++||+++++++++++++|+++++
T Consensus 196 d~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~ 275 (409)
T PRK10090 196 DLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVE 275 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||++||||+|.+.+.++
T Consensus 276 ~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~ 355 (409)
T PRK10090 276 EGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKA 355 (409)
T ss_pred CCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 99999999986555689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|.|+||+.....+..||||+|+||+|+++|.+||++|++.|++++++
T Consensus 356 ~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 356 IKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred HHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHhcceEEEEEec
Confidence 99999999999998766667899999999999999999999999999998764
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-84 Score=652.58 Aligned_cols=369 Identities=31% Similarity=0.435 Sum_probs=345.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+.+++...++..+. ..+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 215 ~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~ 294 (604)
T PLN02419 215 GLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVI 294 (604)
T ss_pred HHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHH
Confidence 5788999999998887765442 234567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
++++|.++|+|+|++|+++|++ +.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 295 l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~-~lk~v~LELGGknp~IV~~DADl 372 (604)
T PLN02419 295 LAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA-KGKRIQSNMGAKNHGLVLPDANI 372 (604)
T ss_pred HHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc-cCCcEEEecCCCCeEEEcCCCCH
Confidence 9999999999999999999854 678889999999999999999999999998886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++|||||++ +|+|+++|.++++++++|+|.|+++++||+++++++++++++|++++++
T Consensus 373 d~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~ 451 (604)
T PLN02419 373 DATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDD 451 (604)
T ss_pred HHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCccc----CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+|||++++|+++|||++||||+|.+++
T Consensus 452 GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a 531 (604)
T PLN02419 452 GAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAA 531 (604)
T ss_pred CCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 99999999742 13589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCC-CCCCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEeCC
Q 017060 317 NTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~-~~~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
.++++++++|.|+||+.. ...+.+||||+|.||+| +++|.+|+++|++.|+|+++.+
T Consensus 532 ~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 591 (604)
T PLN02419 532 RKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQK 591 (604)
T ss_pred HHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEccC
Confidence 999999999999999864 33477999999999999 7999999999999999988863
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-84 Score=647.20 Aligned_cols=370 Identities=46% Similarity=0.833 Sum_probs=348.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++.++++..++..+.. .+...+.+|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 110 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~ 189 (486)
T cd07140 110 SIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLT 189 (486)
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHH
Confidence 56789999999988876554321 22346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+..++++|.++|+|+|+++++++++.+.++.|+.||+++.|.||||+++|+.|++.++..+++|+++|+|||||+||++|
T Consensus 190 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~d 269 (486)
T cd07140 190 ALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFAD 269 (486)
T ss_pred HHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCC
Confidence 99999999999999999999999777889999999999999999999999999998885478999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++|+++
T Consensus 270 adl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a 349 (486)
T cd07140 270 CDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERG 349 (486)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+ |++|||+++|+++|||++||||+|.++
T Consensus 350 ~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~ 429 (486)
T cd07140 350 VKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINK 429 (486)
T ss_pred HHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHH
Confidence 999999999997644568999999999999999999999999999999998 699999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++++|.|+||+++...+.+||||+|+||+|+++|.+||++||+.|+++++
T Consensus 430 a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 430 ALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 99999999999999999877777899999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-83 Score=641.40 Aligned_cols=368 Identities=38% Similarity=0.668 Sum_probs=345.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.++..+. ..+...++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 103 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~ 182 (472)
T TIGR03374 103 IVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 182 (472)
T ss_pred HHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHH
Confidence 4678899999887776653221 124457899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++ +|+|++++++|++.+.++.|++||++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 183 l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGGk~p~iV~~dadl 260 (472)
T TIGR03374 183 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP-SIKRTHMELGGKAPVIVFDDADI 260 (472)
T ss_pred HHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-cccceEEecCCCCeeEECCCCCH
Confidence 99999985 99999999999777889999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|+|+||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++.+++++++++|++++++
T Consensus 261 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 340 (472)
T TIGR03374 261 DAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKAL 340 (472)
T ss_pred HHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 G-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 g-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
| +++++||......|+|+.|||+.+++++|.+++||+||||++|++|+|.|||++++|+++|||++||||+|.+++.++
T Consensus 341 G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~ 420 (472)
T TIGR03374 341 GHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRL 420 (472)
T ss_pred CCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 9 799999976444689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++|.|+||+.....+.+||||+|.||+|+++|.+||++|++.|+++++
T Consensus 421 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 421 SARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence 9999999999999877778899999999999999999999999999998753
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-83 Score=642.73 Aligned_cols=368 Identities=42% Similarity=0.728 Sum_probs=346.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC------CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCCh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA------DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 75 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~ 75 (378)
+++.++|++.+++...++..+. ..+...+.+|+|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 103 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp 182 (477)
T cd07113 103 SANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTP 182 (477)
T ss_pred HHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 4678999999988776654321 1223567899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+++..+.++|.++|+|+|++|++++++. .+..|++||++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||+
T Consensus 183 ~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGGkn~~iV~ 260 (477)
T cd07113 183 LTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQAAS-DLTRVTLELGGKNAAAFL 260 (477)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-hcCceEeecCCCCeeEEC
Confidence 9999999999999999999999998665 88999999999999999999999999999887 789999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++++++++++++|+
T Consensus 261 ~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 340 (477)
T cd07113 261 KDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLD 340 (477)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++|+++++||......|+|+.|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 341 ~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~ 420 (477)
T cd07113 341 DARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSK 420 (477)
T ss_pred HHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 99999999999997544468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++++|+|+||++....+.+||||+|.||+|+++|.++|++||+.|++.++
T Consensus 421 ~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 421 ALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999998776778899999999999999999999999999999875
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-83 Score=642.96 Aligned_cols=368 Identities=79% Similarity=1.317 Sum_probs=349.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 108 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l 187 (476)
T cd07142 108 AARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLA 187 (476)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHH
Confidence 57789999999888777655433334567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++|+|+|+++++++++.+.++.|.+||++|.|+||||+++|+.|.+.+++.+++|+++|+|||||+||++|||++
T Consensus 188 ~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~ 267 (476)
T cd07142 188 AKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD 267 (476)
T ss_pred HHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHH
Confidence 99999999999999999997777899999999999999999999999999988754689999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++|+|||++++|+|+++|.+++.++++|+|.++++++||+++.++++++++++++++++|
T Consensus 268 ~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~G 347 (476)
T cd07142 268 KAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEG 347 (476)
T ss_pred HHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||.....+|+|+.|||+.++++++.+++||+||||++|++|+|++|||+++|++++||++||||+|.+++.++++
T Consensus 348 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~ 427 (476)
T cd07142 348 ATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSR 427 (476)
T ss_pred CEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999998655578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++|.|+||+++..++.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 428 ~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 428 ALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred hCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 999999999998877888999999999999999999999999999885
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=635.80 Aligned_cols=364 Identities=28% Similarity=0.437 Sum_probs=336.1
Q ss_pred HHHHHHHHHHHHhhhcC----ccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQG----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|+++.++++.+ .......+...++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~ 154 (484)
T PLN02174 75 LRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPAS 154 (484)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHH
Confidence 56789999998887765 22222223457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.+ ++|+|++++++|. .+.+..|+. +++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 155 ~~~l~~l~~~-~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~d 230 (484)
T PLN02174 155 SALLAKLLEQ-YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSD 230 (484)
T ss_pred HHHHHHHHHH-hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCC
Confidence 9999999999 6999999999984 445667776 899999999999999999999887 79999999999999999999
Q ss_pred cCHHHHHHHHHHHHh-hcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 158 ADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 158 adl~~aa~~i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
||++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+|.+ ++++||+++++++++++++|++
T Consensus 231 ADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~ 309 (484)
T PLN02174 231 TDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDE 309 (484)
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 69999999999999999999999999999999999999988 7899999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
+ .+|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 310 a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a 387 (484)
T PLN02174 310 K-EVSDKIVYGGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLK 387 (484)
T ss_pred H-HcCCEEEECCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHH
Confidence 8 7899999999753 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 317 NTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++++|.|+||++... .+.+||||+|+||+|+++|.+|+++||+.|+|.++.
T Consensus 388 ~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 388 ERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred HHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECC
Confidence 99999999999999987543 367899999999999999999999999999998763
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=636.74 Aligned_cols=368 Identities=30% Similarity=0.491 Sum_probs=344.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+..++...+.......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l 172 (462)
T PRK13968 93 SANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLI 172 (462)
T ss_pred HHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH
Confidence 56788999988877654332222345678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.+++.++|+|+|+++++++++.. ...++.||++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||++
T Consensus 173 ~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p~iV~~dAdl~ 250 (462)
T PRK13968 173 AQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_pred HHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCceEECCCCCHH
Confidence 99999999999999999985544 4458899999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.++++++++++++++.+|
T Consensus 251 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G 330 (462)
T PRK13968 251 LAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEG 330 (462)
T ss_pred HHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|.+||++++|++++||++||||+|.+.+.++++
T Consensus 331 a~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~ 410 (462)
T PRK13968 331 ARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAA 410 (462)
T ss_pred CEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHH
Confidence 99999997644458999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++|+|+||+....++.+||||+|+||+|+++|.+||++|++.|++.+.
T Consensus 411 ~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 411 RLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred hCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 99999999999877778899999999999999999999999999999775
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-83 Score=641.57 Aligned_cols=369 Identities=42% Similarity=0.691 Sum_probs=348.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..+++..++..+.. .+...+.+|+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 126 ~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 205 (498)
T PLN02278 126 GASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALA 205 (498)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 56789999999988776654433 24456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++++.+.++.|+.||++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 206 l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl 284 (498)
T PLN02278 206 AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA-TVKRVSLELGGNAPFIVFDDADL 284 (498)
T ss_pred HHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh-cCCcEEEecCCCCeeEECCCCCH
Confidence 99999999999999999998777788999999999999999999999999998886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++++|+++|.++++++++|+|.++++++||++++.++++++++|++++++
T Consensus 285 ~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T PLN02278 285 DVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSK 364 (498)
T ss_pred HHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 365 Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~ 444 (498)
T PLN02278 365 GAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVS 444 (498)
T ss_pred CCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999764446899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++|.|+||+.....+.+||||+|.||+|+++|.+||++|++.|+++++
T Consensus 445 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 445 EALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 999999999998765567789999999999999999999999999999765
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-83 Score=641.15 Aligned_cols=370 Identities=64% Similarity=1.101 Sum_probs=350.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 112 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l 191 (481)
T cd07141 112 AIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYL 191 (481)
T ss_pred HHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHH
Confidence 56788999999988877654433344568899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++++.+.+..|+.|+++|.|+||||+.+++.|++.++..+++|+++|+|||||+||++|||++
T Consensus 192 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~ 271 (481)
T cd07141 192 ASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLD 271 (481)
T ss_pred HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHH
Confidence 99999999999999999997777889999999999999999999999999988754689999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.|+++++||++++++++++.++|++++++|
T Consensus 272 ~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 351 (481)
T cd07141 272 YAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEG 351 (481)
T ss_pred HHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||+..+..|+|+.|||+.++++++++++||+||||++|++|+|++||++++|++++||++||||+|.+++.++++
T Consensus 352 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~ 431 (481)
T cd07141 352 AKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSN 431 (481)
T ss_pred CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 99999998655578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++|+|+||++...++.+||||+|.||+|+++|.+++++||+.|++.++
T Consensus 432 ~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 481 (481)
T cd07141 432 ALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTIK 481 (481)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEEC
Confidence 99999999999877778899999999999999999999999999998763
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-83 Score=635.86 Aligned_cols=364 Identities=42% Similarity=0.707 Sum_probs=343.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 162 (448)
T TIGR01780 83 AASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALA 162 (448)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHH
Confidence 46788999988887776654432 34456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcC
Q 017060 81 VSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dad 159 (378)
++++|.++|+|+|++|+++++ +.+.++.|++|++++.|.||||+.+|+.|++.++. +++|+++|+|||||+||++|+|
T Consensus 163 l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV~~dad 241 (448)
T TIGR01780 163 LARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIVFDDAD 241 (448)
T ss_pred HHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEECCCCC
Confidence 999999999999999999986 67788999999999999999999999999998887 7899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|+++++
T Consensus 242 l~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 321 (448)
T TIGR01780 242 IDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVE 321 (448)
T ss_pred HHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|++||++++|+++|||++||||+|.++++++
T Consensus 322 ~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~ 401 (448)
T TIGR01780 322 KGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRV 401 (448)
T ss_pred CCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHH
Confidence 99999999976544689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 366 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k 366 (378)
++++++|.|+||+....++.+||||+|.||+|+++|.+|+++|++.|
T Consensus 402 ~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 402 AEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 99999999999998766778999999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-83 Score=633.79 Aligned_cols=367 Identities=35% Similarity=0.586 Sum_probs=344.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCC--C-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA--D-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++..++++.+..... . .+...+++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 166 (457)
T PRK09406 87 CAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTA 166 (457)
T ss_pred HHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHH
Confidence 4678899999988776543221 1 234568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.++.++|.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++||
T Consensus 167 ~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~~iV~~da 244 (457)
T PRK09406 167 LYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDPFIVMPSA 244 (457)
T ss_pred HHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCeeEECCCC
Confidence 9999999999999999999986 34567789999999999999999999999998887 789999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||++++.++++++++|++++
T Consensus 245 dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 324 (457)
T PRK09406 245 DLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAV 324 (457)
T ss_pred CHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|++||++++|+++|||++||||+|.+.+.+
T Consensus 325 ~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 404 (457)
T PRK09406 325 AAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQER 404 (457)
T ss_pred HCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 99999999998655569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++++|+|+||+.+...+.+||||+|+||+|+++|.+++++||+.|++.+
T Consensus 405 ~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 405 FIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 9999999999999988778889999999999999999999999999999865
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=638.09 Aligned_cols=369 Identities=45% Similarity=0.787 Sum_probs=348.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++.+.++..+...+...+.+|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+
T Consensus 109 ~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l 188 (488)
T PRK13252 109 GADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKL 188 (488)
T ss_pred HHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHH
Confidence 47789999999888776654433445678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|+++|+|+|++|++++++. .++.|+.|+++|.|.||||+++|+.|.+.++. .++|+++|+|||||+||++|||++
T Consensus 189 ~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~-~l~~~~lElgG~~p~iV~~dAdl~ 266 (488)
T PRK13252 189 AEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA-SLKEVTMELGGKSPLIVFDDADLD 266 (488)
T ss_pred HHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEEcCCCCeeEECCCCCHH
Confidence 9999999999999999998665 88999999999999999999999999998887 689999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++++|
T Consensus 267 ~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 346 (488)
T PRK13252 267 RAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEG 346 (488)
T ss_pred HHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.+||++++|++++||++||||+|.+++.
T Consensus 347 a~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~ 426 (488)
T PRK13252 347 ARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAH 426 (488)
T ss_pred CEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHH
Confidence 99999996432 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 427 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 427 RVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred HHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 9999999999999997766778999999999999999999999999999998874
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-83 Score=636.59 Aligned_cols=369 Identities=48% Similarity=0.838 Sum_probs=349.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++...++..+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 103 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l 182 (480)
T cd07559 103 AIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVL 182 (480)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHH
Confidence 46788999998887766654434455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc---
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA--- 158 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da--- 158 (378)
++++.++ +|+|++|++++.+.+.++.|++||++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++||
T Consensus 183 ~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~p~~lElGGk~p~iV~~dA~~~ 260 (480)
T cd07559 183 MELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-NLIPVTLELGGKSPNIFFDDAMDA 260 (480)
T ss_pred HHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCcEEeccCCCCeEEEcCCcccc
Confidence 9999996 99999999999777889999999999999999999999999998887 789999999999999999999
Q ss_pred --CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 159 --DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 159 --dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|+|+++++||+++++++++++++|++
T Consensus 261 ~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 340 (480)
T cd07559 261 DDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDI 340 (480)
T ss_pred ccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCC
Q 017060 237 GVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 312 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 312 (378)
++++|+++++||.... ..|+|+.|||+.+++++|.++++|+||||++|++|+|++|+|+++|++++||++||||+|
T Consensus 341 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 420 (480)
T cd07559 341 GKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRD 420 (480)
T ss_pred HHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCC
Confidence 9999999999997642 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 313 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 313 ~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
.+++.++++++++|+|+||+.+...+.+||||+|.||+|+++|.+|+++|++.|++++++
T Consensus 421 ~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 480 (480)
T cd07559 421 INRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVSY 480 (480)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEeC
Confidence 999999999999999999987777788999999999999999999999999999998764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=634.68 Aligned_cols=370 Identities=58% Similarity=1.011 Sum_probs=350.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.+++++.++++..++..+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+
T Consensus 111 ~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l 190 (481)
T cd07143 111 SADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYM 190 (481)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHH
Confidence 56789999999988766654433445678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++++.+.+..|+.||++|.|.||||+.+|+.|.+.+++.+++|+++|+|||||+||++|||++
T Consensus 191 ~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~ 270 (481)
T cd07143 191 TKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLE 270 (481)
T ss_pred HHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHH
Confidence 99999999999999999997778899999999999999999999999999988754688999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||+++..+++++.++|++++++|
T Consensus 271 ~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~g 350 (481)
T cd07143 271 SAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEG 350 (481)
T ss_pred HHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||......|+|+.|||+.++++++.++++|+||||++|++|+|.+||++++|++++||++||||+|.+.+.++++
T Consensus 351 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 430 (481)
T cd07143 351 ATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVAN 430 (481)
T ss_pred CEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999998655578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++|+|+||+.+...+.+||||+|.||+|+++|.+++++||+.|++.++
T Consensus 431 ~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 431 ALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 99999999999877778899999999999999999999999999999875
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-82 Score=633.41 Aligned_cols=368 Identities=48% Similarity=0.813 Sum_probs=346.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++....++..+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 103 ~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l 182 (475)
T cd07117 103 AADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLEL 182 (475)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHH
Confidence 56788999988877766554433344578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++ +|+|++|++++.+.+.+..|+.|+++|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 183 ~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dADl~ 260 (475)
T cd07117 183 AKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-KLIPATLELGGKSANIIFDDANWD 260 (475)
T ss_pred HHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCcEEEeCCCCCeEEECCCCChH
Confidence 9999985 99999999998777889999999999999999999999999998886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 261 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G 340 (475)
T cd07117 261 KALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEG 340 (475)
T ss_pred HHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||.... ..|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|++++||++||||+|.+++.
T Consensus 341 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 420 (475)
T cd07117 341 AKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRAL 420 (475)
T ss_pred CEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHH
Confidence 99999997532 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++|+|+||+++..++.+||||+|+||+|+++|.+|+++||+.|+++++
T Consensus 421 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 421 RVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 999999999999999877778899999999999999999999999999999765
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-82 Score=634.04 Aligned_cols=369 Identities=39% Similarity=0.678 Sum_probs=345.2
Q ss_pred HHHHHHHHHHHHhhhcCccCC----CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++...++..+ ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t 181 (481)
T TIGR03216 102 GAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181 (481)
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 456788999888776655432 1123456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCch-hhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+.++.++|.++|+|+|++++++|.+. +.++.|..||++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 182 ~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~-~~~~~~lElgG~n~~iV~~ 260 (481)
T TIGR03216 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD-GVKPVSFELGGKNAAIVFA 260 (481)
T ss_pred HHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence 99999999999999999999998654 478889999999999999999999999999887 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++
T Consensus 261 dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 340 (481)
T TIGR03216 261 DCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYAL 340 (481)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccC-----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecC
Q 017060 237 GVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 311 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~ 311 (378)
++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+||++++|+++|||++||||+
T Consensus 341 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~ 420 (481)
T TIGR03216 341 AVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTE 420 (481)
T ss_pred HHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECC
Confidence 9999999999997532 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 312 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 312 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
|.+.++++++++++|.|+||+....++.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 421 DLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999776678899999999999999999999999999999765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-82 Score=634.36 Aligned_cols=370 Identities=45% Similarity=0.781 Sum_probs=350.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l 180 (482)
T cd07119 101 VANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180 (482)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHH
Confidence 56788999999887766654444455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++|+|+|+++++++++.+.+..|++|+++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 181 ~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGkn~~iV~~dADl~ 259 (482)
T cd07119 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFE 259 (482)
T ss_pred HHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEECCCCCHH
Confidence 9999999999999999998777789999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++.++++++++++++++++|
T Consensus 260 ~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 339 (482)
T cd07119 260 TAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEG 339 (482)
T ss_pred HHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||.... ..|+|+.|||+.+++++|.++++|+||||++|++|+|++||++++|++++||++||||+|.+.++
T Consensus 340 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~ 419 (482)
T cd07119 340 ARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARAN 419 (482)
T ss_pred CEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 99999997532 25899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++||+.|++++++
T Consensus 420 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 420 RVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999997667788999999999999999999999999999999886
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-82 Score=634.44 Aligned_cols=369 Identities=66% Similarity=1.108 Sum_probs=350.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+
T Consensus 108 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l 187 (476)
T cd07091 108 SIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYL 187 (476)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHH
Confidence 56788999999888776655444556678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++++.+.+..|..|+++|.|.||||+.+|+.|.+.++..+++|+++|+|||||+||++|||++
T Consensus 188 ~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~ 267 (476)
T cd07091 188 AELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLD 267 (476)
T ss_pred HHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHH
Confidence 99999999999999999997777889999999999999999999999999988765789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|
T Consensus 268 ~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 347 (476)
T cd07091 268 KAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEG 347 (476)
T ss_pred HHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||......|+|++|||+.++++++.++++|+||||++|++|+|++||++++|++++||++||||+|.++++++++
T Consensus 348 a~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~ 427 (476)
T cd07091 348 ATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSR 427 (476)
T ss_pred CEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999998655578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
++++|+|+||+.+..++.+||||+|+||+|+++|.+|+++|++.|++.+
T Consensus 428 ~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 428 ALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred hcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 9999999999987778889999999999999999999999999999853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-82 Score=628.66 Aligned_cols=367 Identities=37% Similarity=0.603 Sum_probs=347.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+.++++..+...+...+...++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 84 ~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l 163 (455)
T cd07120 84 AISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAI 163 (455)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHH
Confidence 57889999999988776654433445678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-cCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 82 SKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 82 ~~~l~~-aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++|++ +|+|+|+++++++.+.+.++.|++||+++.|.||||+++++.|.+.+++ +++|+++|+|||||+||++|+|+
T Consensus 164 ~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~~daDl 242 (455)
T cd07120 164 IRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVFDDADL 242 (455)
T ss_pred HHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEECCCCCH
Confidence 999999 7999999999998777789999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||++++++++++++++++++++
T Consensus 243 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 322 (455)
T cd07120 243 DAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAA 322 (455)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 241 GAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 241 ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+.++
T Consensus 323 ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~ 402 (455)
T cd07120 323 GAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAM 402 (455)
T ss_pred CCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 999999875432 25899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|.|+||++....+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 403 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 403 RVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 9999999999999998777788999999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-82 Score=632.71 Aligned_cols=370 Identities=44% Similarity=0.778 Sum_probs=348.5
Q ss_pred HHHHHHHHHHHHhhhcCccCC---CC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTAP---AD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++||+.+++++.++... .. .+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~ 193 (503)
T PLN02467 114 VAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVT 193 (503)
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHH
Confidence 467889999999888765421 11 23457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+..++++|.++|+|+|++++++|++.+.++.|+.|+++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 194 ~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~d 272 (503)
T PLN02467 194 CLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDD 272 (503)
T ss_pred HHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhc-cCCcEEEECCCCCceEECCC
Confidence 99999999999999999999999777889999999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.++++++.++|+++
T Consensus 273 ADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a 352 (503)
T PLN02467 273 VDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTA 352 (503)
T ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 238 VDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+.+|+++++||.... ..|+|++|||+.++++++.++++|+||||++|++|+|.+||++++|++++||+++|||+|.+.
T Consensus 353 ~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 432 (503)
T PLN02467 353 KSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLER 432 (503)
T ss_pred HHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 999999999997532 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|.|+||+.......+||||+|.||+|+++|.+|+++|++.|++.+..
T Consensus 433 a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~ 489 (503)
T PLN02467 433 CERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYI 489 (503)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEec
Confidence 999999999999999997766678999999999999999999999999999999864
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-82 Score=633.50 Aligned_cols=369 Identities=54% Similarity=0.915 Sum_probs=348.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+
T Consensus 111 ~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l 190 (484)
T cd07144 111 IIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190 (484)
T ss_pred HHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 56789999999988866554433445578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|++|++++.+.+.++.|..|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 191 ~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~-~~~~~~lElGGk~p~iV~~dADl~ 269 (484)
T cd07144 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ-NLKAVTLECGGKSPALVFEDADLD 269 (484)
T ss_pred HHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCeEEEEcCCCCeEEECCCCCHH
Confidence 9999999999999999999777889999999999999999999999999998886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhh-cccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|.+++++ +++|+|.++++++||+++.++++++.++|++++++
T Consensus 270 ~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 349 (484)
T cd07144 270 QAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKE 349 (484)
T ss_pred HHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999985 89999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 241 GAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 241 ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|++++||++||||+|.+.+.
T Consensus 350 ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~ 429 (484)
T cd07144 350 GAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAH 429 (484)
T ss_pred CCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 999999997543 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++|.|+||+.+..++.+||||+|+||+|+++|.+|+++||+.|++.++
T Consensus 430 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 430 RVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999877677899999999999999999999999999999875
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-82 Score=628.63 Aligned_cols=368 Identities=42% Similarity=0.703 Sum_probs=347.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++.+.++..+...+...+..|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 83 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l 162 (456)
T cd07107 83 AAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRL 162 (456)
T ss_pred HHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHH
Confidence 46788999988887777665544455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.+++.++ +|+|++|++++++.+.++.|++|++++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 163 ~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dadl~ 240 (456)
T cd07107 163 AELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFPDADPE 240 (456)
T ss_pred HHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECCCCCHH
Confidence 9999996 99999999998777788999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHH-hhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 162 KAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 162 ~aa~~i~~~~-~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
.|++.+++++ |.++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++..++++++++|++++++
T Consensus 241 ~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 320 (456)
T cd07107 241 AAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKRE 320 (456)
T ss_pred HHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHC
Confidence 9999999995 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||++++|++++||++||||+|.+++
T Consensus 321 Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~ 400 (456)
T cd07107 321 GARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQA 400 (456)
T ss_pred CCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHH
Confidence 999999997532 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|.|+||+.....+.+||||+|+||+|+++|.+|+++||+.|+++++
T Consensus 401 ~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 401 HRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred HHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999999876677899999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-82 Score=627.73 Aligned_cols=369 Identities=53% Similarity=0.938 Sum_probs=350.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 84 ~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l 163 (453)
T cd07115 84 AADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRI 163 (453)
T ss_pred HHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 57889999999888877655544556678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+++++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++. +++|+++|+||+||+||++|||++
T Consensus 164 ~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~dAdl~ 242 (453)
T cd07115 164 AELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFADADLD 242 (453)
T ss_pred HHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCCCCHH
Confidence 9999999999999999999777788999999999999999999999999998887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++++|
T Consensus 243 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 322 (453)
T cd07115 243 AAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEG 322 (453)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||......|+|++|||+.++++++.+++||+||||++|++|+|.|||++++|++++||++||||+|.+.++++++
T Consensus 323 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~ 402 (453)
T cd07115 323 ARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAA 402 (453)
T ss_pred CEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHH
Confidence 99999997654468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++|+|+||+.+..++.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus 403 ~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 403 ALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred hcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999877788899999999999999999999999999999765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-82 Score=623.43 Aligned_cols=365 Identities=37% Similarity=0.590 Sum_probs=343.8
Q ss_pred HHHHHHHHHHHHhhhcC-ccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQG-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..+++... +..+.. +...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~ 141 (429)
T cd07100 63 CAWICRYYAENAEAFLADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALA 141 (429)
T ss_pred HHHHHHHHHHHHHHhcCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 46788999999888754 333332 4457889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
|.++|.++|+|+|+++++++++ +....|+.|++++.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 142 l~~~l~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl 219 (429)
T cd07100 142 IEELFREAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADL 219 (429)
T ss_pred HHHHHHHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCH
Confidence 9999999999999999999855 567889999999999999999999999999886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.+++.++++|+|+|+++++||++++.++++++++|++++++
T Consensus 220 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 220 DKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++++||++||||+|.+.+++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 99999999764446899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++|.|+||++....+.+||||+|.||+|+++|.++|++|++.|++.
T Consensus 380 ~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 380 RRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 9999999999998777788999999999999999999999999999885
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=629.57 Aligned_cols=368 Identities=30% Similarity=0.520 Sum_probs=342.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..
T Consensus 120 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~ 199 (508)
T PLN02315 120 IIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199 (508)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHH
Confidence 57789999999888776654432 34455778999999999999999999999999999999999999999999999887
Q ss_pred ----HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 81 ----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 81 ----l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+.++|.++|+|+|++|++++ +.+.+..|+.||++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 200 ~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~-~~~~~~lElgGknp~iV~~ 277 (508)
T PLN02315 200 MTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNA-RFGKCLLELSGNNAIIVMD 277 (508)
T ss_pred HHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCCEEEecCCCCeEEECC
Confidence 67888999999999999998 77789999999999999999999999999998886 7889999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.++++.+||+++..+++++.+++++
T Consensus 278 dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 357 (508)
T PLN02315 278 DADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEI 357 (508)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||...+..|+|++|||+ +++++|.+++||+||||++|++|+|+|||++++|+++|||++||||+|.+++
T Consensus 358 a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a 436 (508)
T PLN02315 358 IKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETI 436 (508)
T ss_pred HHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 999999999999864456899999999 5899999999999999999999999999999999999999999999999999
Q ss_pred HHHHH--HcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 317 NTLMR--ALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~~--~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++ ++++|.|+||+.... .+.+||||+|.||+|+++|.+++++||+.|++++++
T Consensus 437 ~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 437 FKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred HHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence 99985 799999999985443 467899999999999999999999999999998875
|
|
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=629.22 Aligned_cols=369 Identities=39% Similarity=0.684 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..++++.+...+. ..+...+.+|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 104 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~ 183 (475)
T PRK13473 104 IVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALK 183 (475)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHH
Confidence 5678899998888876654321 123356889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.+++.++ +|+|++|++++.+.+.+..|++|+++|.|.||||+++|+.|.+.++. +++|+++|+|||||+||++|||+
T Consensus 184 l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dADl 261 (475)
T PRK13473 184 LAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD-SVKRTHLELGGKAPVIVFDDADL 261 (475)
T ss_pred HHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEECCCCCH
Confidence 99999999 99999999999777889999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
|.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.|+++++||+++++++++++++|+++.++
T Consensus 262 d~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 341 (475)
T PRK13473 262 DAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKAL 341 (475)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 G-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 g-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
| +++++||+.....|+|+.|||+.++++++.++++|+||||++|++|+|+||||+++|++++||++||||+|.+++.++
T Consensus 342 G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~ 421 (475)
T PRK13473 342 GHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRV 421 (475)
T ss_pred CCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 9 999999986544689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|++.+++
T Consensus 422 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 422 SARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 99999999999998766778999999999999999999999999999998764
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=631.35 Aligned_cols=369 Identities=42% Similarity=0.749 Sum_probs=345.8
Q ss_pred HHHHHHHHHHHHhh-hcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|+++.+++ ..++..+.. +...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~ 180 (488)
T TIGR02299 102 AAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAAR 180 (488)
T ss_pred HHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHH
Confidence 46778888888773 344433332 3456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++.+.+.++.|+.|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 181 l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~-~l~~~~lElGGknp~iV~~dAdl 259 (488)
T TIGR02299 181 LAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD-TLKRFSMELGGKSPVIVFDDADL 259 (488)
T ss_pred HHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCeEEEEcCCCCeEEECCCCCH
Confidence 99999999999999999998777788899999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++++++++++++|++++++
T Consensus 260 ~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 339 (488)
T TIGR02299 260 ERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKE 339 (488)
T ss_pred HHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC-------CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 241 GAKLETGGERLG-------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 241 ga~~~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 340 Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 419 (488)
T TIGR02299 340 GATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDV 419 (488)
T ss_pred CCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999987532 2589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|++++++
T Consensus 420 ~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 420 GRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred HHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999987766778999999999999999999999999999999875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-81 Score=627.33 Aligned_cols=367 Identities=45% Similarity=0.752 Sum_probs=345.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+..+++..+...+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 101 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~ 180 (473)
T cd07097 101 AGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWA 180 (473)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHH
Confidence 5678899999888876654332 234567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.+++.++|+|+|++|++++++.+++..|+.|++++.|.||||+.+++.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 181 l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dadl 259 (473)
T cd07097 181 LVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAA-RGARVQLEMGGKNPLVVLDDADL 259 (473)
T ss_pred HHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCcEEEECCCCCeeEECCCCCH
Confidence 99999999999999999999777789999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++++++++++++|++++++
T Consensus 260 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 339 (473)
T cd07097 260 DLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSE 339 (473)
T ss_pred HHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 241 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 241 ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
|+++++||.... +.|+|++|||+.++++++.+++||+||||++|++|+|++||++++|+++|||+++|||+|.+.+.+
T Consensus 340 Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~ 419 (473)
T cd07097 340 GAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATH 419 (473)
T ss_pred CCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 999999997543 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCC-CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 017060 319 LMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++|+|+||+... ..+.+||||+|.||+| +++|.+|+++|++.|++.
T Consensus 420 ~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 420 FKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 99999999999998654 3467999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-81 Score=623.64 Aligned_cols=367 Identities=47% Similarity=0.786 Sum_probs=347.1
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.++..+ ...+...++.|+|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~ 164 (454)
T cd07118 85 AADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLM 164 (454)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHH
Confidence 467889999988777665433 2234556889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|+++|+|+|+++++++++.+.+..|+.|+++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 165 l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~dAdl 243 (454)
T cd07118 165 LAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADADL 243 (454)
T ss_pred HHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECCCCCH
Confidence 99999999999999999998777789999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|+++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++|++++++
T Consensus 244 ~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 323 (454)
T cd07118 244 DAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAE 323 (454)
T ss_pred HHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 GAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||.... ..|+|++|||+.++++++.++++|+||||++|++|+|++||++++|++++||++||||+|.+.++++
T Consensus 324 ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~ 403 (454)
T cd07118 324 GATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTV 403 (454)
T ss_pred CCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHH
Confidence 999999998654 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++|.|+||++....+.+||||+|+||+|+++|.+++++||+.|++.
T Consensus 404 ~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 404 ARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 99999999999998777788999999999999999999999999999885
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-81 Score=624.65 Aligned_cols=368 Identities=46% Similarity=0.808 Sum_probs=348.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l 162 (457)
T cd07090 83 SADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLL 162 (457)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHH
Confidence 56788999999888766654434466778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++++ +.++.|+.|++++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 163 ~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dAdl~ 240 (457)
T cd07090 163 AEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLE 240 (457)
T ss_pred HHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECCCCCHH
Confidence 999999999999999999854 588999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.++++++||+++.++++++.++|++++++|
T Consensus 241 ~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 320 (457)
T cd07090 241 NAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEG 320 (457)
T ss_pred HHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC-----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 242 AKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 242 a~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|.||||+++|++++||++||||+|.+.+
T Consensus 321 a~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~ 400 (457)
T cd07090 321 AKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRA 400 (457)
T ss_pred CEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHH
Confidence 99999997532 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|.|+||+.+..++.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus 401 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 401 HRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 9999999999999999877778899999999999999999999999999999775
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-81 Score=624.57 Aligned_cols=367 Identities=48% Similarity=0.843 Sum_probs=345.1
Q ss_pred HHHHHHHHHHHHhhhcC---ccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQG---LTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++.+++++.. ...+ ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~ 162 (456)
T cd07110 83 VAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLT 162 (456)
T ss_pred HHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHH
Confidence 46778999998887743 2222 1235567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+..+.++|.++|+|+|+++++++++.+.++.|+.||+++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|
T Consensus 163 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~iV~~d 241 (456)
T cd07110 163 ELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDD 241 (456)
T ss_pred HHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCeeEECCC
Confidence 99999999999999999999999777788999999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.|+++++||+++++++++++++++++
T Consensus 242 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a 321 (456)
T cd07110 242 ADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARG 321 (456)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 238 VDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+.+|+++++||+... ..|+|+.|||+.+++++|.++++|+||||++|++|+|.|||++++|++++||+++|||+|.+.
T Consensus 322 ~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~ 401 (456)
T cd07110 322 KEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAER 401 (456)
T ss_pred HhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 999999999997643 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++++|+|+||+.+...+.+||||+|+||+|+++|.+||++|++.|+++
T Consensus 402 ~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 402 CDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999997766788999999999999999999999999999885
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=623.74 Aligned_cols=368 Identities=43% Similarity=0.693 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCCC----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLT-APAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++.+++++.++. ++.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~ 164 (459)
T cd07089 85 PIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPL 164 (459)
T ss_pred HHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChH
Confidence 5678999999988876654 2321 2456789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++..+.++|.++|+|+|+++++++++.+++..|..||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 165 ~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n~~iV~~ 243 (459)
T cd07089 165 SALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKSANIVLD 243 (459)
T ss_pred HHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCeeEECC
Confidence 999999999999999999999999777789999999999999999999999999999887 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++.++++++++++++
T Consensus 244 dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~ 323 (459)
T cd07089 244 DADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIAR 323 (459)
T ss_pred CCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 237 GVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++|+++++||.... ..|+|+.|||+.++++++.+++||+||||++|++|+|+|||++++|++++||++||||+|.+
T Consensus 324 a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~ 403 (459)
T cd07089 324 GRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVD 403 (459)
T ss_pred HHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 9999999999997543 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
.++++++++++|+|+||+....++.+||||+|.||+|+++|.+|+++||+.|++.+
T Consensus 404 ~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 404 RAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred HHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 99999999999999999987777889999999999999999999999999999863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-81 Score=625.97 Aligned_cols=368 Identities=35% Similarity=0.492 Sum_probs=343.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++...++..+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~ 181 (478)
T cd07085 102 GLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMR 181 (478)
T ss_pred HHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHH
Confidence 4567889988877776665432 234557899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++ +.+.+..|++|++++.|.||||+++++.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 182 l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dADl 259 (478)
T cd07085 182 LAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA-NGKRVQALGGAKNHAVVMPDADL 259 (478)
T ss_pred HHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-cCCcEEecCCCCCceEECCCCCH
Confidence 99999999999999999998 45678899999999999999999999999998886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++++
T Consensus 260 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 339 (478)
T cd07085 260 EQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEE 339 (478)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||.... .+|+|+.|||+.++++++.++++|+||||++|++|+|++||++++|+++|||++||||+|.+++
T Consensus 340 Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~ 419 (478)
T cd07085 340 GAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAA 419 (478)
T ss_pred CCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 999999997422 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|.|+||+.... .+.+||||+|.||+| +++|.+|+++|++.|+++++
T Consensus 420 ~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 420 RKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred HHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 99999999999999986443 467899999999999 57899999999999999875
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=624.18 Aligned_cols=368 Identities=50% Similarity=0.853 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l 170 (462)
T cd07112 91 AANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRL 170 (462)
T ss_pred HHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHH
Confidence 46788999999888777654443455678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc-CH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DV 160 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da-dl 160 (378)
.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+++|+.|++.++..++||+++|+||+||+||++|+ |+
T Consensus 171 ~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl 250 (462)
T cd07112 171 AELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDL 250 (462)
T ss_pred HHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCH
Confidence 99999999999999999997778899999999999999999999999999988844789999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++|++++++
T Consensus 251 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ 330 (462)
T cd07112 251 DAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAE 330 (462)
T ss_pred HHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 241 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 241 ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
|+++++||.... ..|+|+.|||+.+++++++++++|+||||++|++|+|.+|||+++|++++||++||||+|.+.+.+
T Consensus 331 Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~ 410 (462)
T cd07112 331 GARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHR 410 (462)
T ss_pred CCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHH
Confidence 999999987532 258999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++|.|+||+++...+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 411 ~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 411 VARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred HHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 999999999999998777788999999999999999999999999999885
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-81 Score=623.42 Aligned_cols=366 Identities=41% Similarity=0.676 Sum_probs=344.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH-H
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-L 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~-~ 79 (378)
+++.++|++.++++..++..+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~ 175 (465)
T cd07151 96 AMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGL 175 (465)
T ss_pred HHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHH
Confidence 56788999988888766554432 355678899999999999999999999999999999999999999999999996 6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcC
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dad 159 (378)
++.++|.++|+|+|+++++++++.+.+..|++|+.++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||
T Consensus 176 ~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~p~iV~~daD 254 (465)
T cd07151 176 LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKKVALELGGNNPFVVLEDAD 254 (465)
T ss_pred HHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCC
Confidence 899999999999999999998777888999999999999999999999999999887 7899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.++++.+||+++.+++++++++++++++
T Consensus 255 l~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~ 334 (465)
T cd07151 255 IDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVE 334 (465)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|+|||++++|+++|||++||||+|.++++++
T Consensus 335 ~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~ 411 (465)
T cd07151 335 EGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF 411 (465)
T ss_pred CCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHH
Confidence 99999999864 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 320 MRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++|.|+||+.+.. .+.+||||+|.||+|+++|.++|++|++.|+++++
T Consensus 412 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 412 ARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred HHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999997654 46799999999999999999999999999999764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-81 Score=622.48 Aligned_cols=366 Identities=45% Similarity=0.748 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+.+++.+...+...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+
T Consensus 84 ~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l 163 (454)
T cd07109 84 AARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRL 163 (454)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56788999998888877655544456789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++.+.+.++.|++|+++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|+|++
T Consensus 164 ~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~~daDl~ 242 (454)
T cd07109 164 AELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFADADLE 242 (454)
T ss_pred HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEECCCCCHH
Confidence 9999999999999999998777889999999999999999999999999998886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.+ ++++||++++++++++.++|++++++|
T Consensus 243 ~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~g 321 (454)
T cd07109 243 AALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARG 321 (454)
T ss_pred HHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999986 689999999999999999999999999
Q ss_pred CeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 242 AKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 242 a~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|+|.+|||+++|++++||++||||+|.+.+++
T Consensus 322 a~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~ 401 (454)
T cd07109 322 ARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALR 401 (454)
T ss_pred CEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHH
Confidence 99999987532 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCC-CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 319 LMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~-~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++|.|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 402 ~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 402 VARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999976 45677899999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-81 Score=624.92 Aligned_cols=367 Identities=46% Similarity=0.764 Sum_probs=342.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++..+++..+...+...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+
T Consensus 103 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l 182 (479)
T cd07116 103 AIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL 182 (479)
T ss_pred HHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56788999998877666544433444578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC----
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED---- 157 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d---- 157 (378)
++++.++ +|+|++|+++|.+.+.+..|+.||++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|
T Consensus 183 ~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~~~p~~lElGGk~p~iV~~da~~~ 260 (479)
T cd07116 183 MELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NIIPVTLELGGKSPNIFFADVMDA 260 (479)
T ss_pred HHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-CCCeEEEECCCCCeEEEecCcccc
Confidence 9999998 99999999998777889999999999999999999999999999887 78999999999999999987
Q ss_pred --cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 158 --ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 158 --adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|++.|++.++++. +++||.|++++|+|||++++|+|+++|.++++++++|+|.++++.+||+++++++++++++|+
T Consensus 261 ~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~ 339 (479)
T cd07116 261 DDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYID 339 (479)
T ss_pred cccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 79999999999864 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecC
Q 017060 236 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 311 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~ 311 (378)
+++++|+++++||.... ..|+|+.|||+.+++ +|.+++||+||||++|++|+|+|||++++|+++|||+++|||+
T Consensus 340 ~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~ 418 (479)
T cd07116 340 IGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTR 418 (479)
T ss_pred HHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcC
Confidence 99999999999997532 258999999999875 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 312 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 312 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
|.+++.++++++++|.|+||+.+...+.+||||+|.||+|+++|.+||++|++.|++.+++
T Consensus 419 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 479 (479)
T cd07116 419 DGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVSY 479 (479)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEeC
Confidence 9999999999999999999998777778999999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-81 Score=622.77 Aligned_cols=368 Identities=32% Similarity=0.552 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.+...+. ..+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 177 (474)
T cd07130 98 MIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIA 177 (474)
T ss_pred HHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHH
Confidence 4677889988887776654432 234456888999999999999999999999999999999999999999999999988
Q ss_pred HHHH----HHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 81 VSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 81 l~~~----l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++++ |.++|+|+|++++++++ .+.++.|++|+++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 178 l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~p~iV~~ 255 (474)
T cd07130 178 VTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRSLLELGGNNAIIVME 255 (474)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHh-cCCCEEEEcCCCCeEEECC
Confidence 7766 57899999999999984 4578999999999999999999999999998887 7889999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++.+++++++++|++
T Consensus 256 dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 335 (474)
T cd07130 256 DADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEE 335 (474)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||+..+..|+|++|||+.++++ |.+++||+||||++|++|+|++||++++|+++|||++||||+|.+++
T Consensus 336 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a 414 (474)
T cd07130 336 AKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNA 414 (474)
T ss_pred HHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 99999999999986544689999999988766 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHH--cceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 317 NTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~~~--l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++ +++|.|+||+.+. ..+.+||||+|.||+|+++|.+++++|++.|++.+++
T Consensus 415 ~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 415 FRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred HHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence 999987 8999999998654 3577999999999999999999999999999988764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-81 Score=628.19 Aligned_cols=368 Identities=29% Similarity=0.461 Sum_probs=341.5
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++|++.+++++.+...+ ...+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 135 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~ 213 (522)
T cd07123 135 LIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNY 213 (522)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHH
Confidence 467889999998887665433 22355678999998 999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCC------cceeecCCCCcEE
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFI 153 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~------~v~~e~gG~~~~i 153 (378)
.+.++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+++|+.|++.+++ +++ |+++|+|||||+|
T Consensus 214 ~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~-~l~~~~~~~~v~lElGGkn~~I 292 (522)
T cd07123 214 LVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGE-NLDRYRTYPRIVGETGGKNFHL 292 (522)
T ss_pred HHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh-hcccccccCCEEEECCCCCeeE
Confidence 999999999999999999999777789999999999999999999999999999886 555 8999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++
T Consensus 293 V~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~ 372 (522)
T cd07123 293 VHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGY 372 (522)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhC-CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHHHcCC-CCceEEEe
Q 017060 234 IRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQ-YGLAAGVF 309 (378)
Q Consensus 234 i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~~v~ 309 (378)
|++++++ |+++++||......|+|++|||+.+++++|.+++||+||||++|++|+| ++|+|+++|+++ |||++|||
T Consensus 373 v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vf 452 (522)
T cd07123 373 IDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIF 452 (522)
T ss_pred HHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEE
Confidence 9999999 9999999975444689999999999999999999999999999999994 799999999985 99999999
Q ss_pred cCCHHHHHHHHHHc--ceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 017060 310 THNLDTANTLMRAL--RVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 310 s~d~~~~~~~~~~l--~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~ 371 (378)
|+|.+++.++++++ ++|.|+||+.+.. .+.+||||+|.||+| +++|.+++++|++.|++++.
T Consensus 453 t~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 453 AQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred eCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 99999999999997 5999999987543 357899999999996 99999999999999999765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-81 Score=622.19 Aligned_cols=366 Identities=41% Similarity=0.690 Sum_probs=343.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++++++.+.++..+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 85 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 164 (456)
T cd07145 85 TIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPL 164 (456)
T ss_pred HHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 56789999988877766543322 1345678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.++.++|.++|+|+|+++++++++.+.++.|++|++++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 165 ~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~n~~iV~~ 243 (456)
T cd07145 165 TAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGSDPMIVLK 243 (456)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeeEECC
Confidence 999999999999999999999999777889999999999999999999999999999887 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++|++
T Consensus 244 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 323 (456)
T cd07145 244 DADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVND 323 (456)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||..+ .|+|++|||+.+++++++++++|+||||++|++|+|++||++++|++++||++||||+|.+.+
T Consensus 324 a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 401 (456)
T cd07145 324 AVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRA 401 (456)
T ss_pred HHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 999999999999753 389999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
.++++++++|+|+||+.+.. .+.+||||+|.||+|+++|++||++|++.|++++
T Consensus 402 ~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 402 LKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 99999999999999987654 3578999999999999999999999999999853
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-81 Score=628.60 Aligned_cols=370 Identities=40% Similarity=0.625 Sum_probs=347.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 133 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l 212 (512)
T cd07124 133 AIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKL 212 (512)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHH
Confidence 56788999999988866554444456778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-----CCCcceeecCCCCcEEEcC
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-----~~~~v~~e~gG~~~~iV~~ 156 (378)
.+++.++|+|+|+++++++.+.+.+..|+.||++|.|.||||+++|+.|.+.+++. +++|+++|+|||||+||++
T Consensus 213 ~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~ 292 (512)
T cd07124 213 VEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDE 292 (512)
T ss_pred HHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECC
Confidence 99999999999999999997778899999999999999999999999999988763 5899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.|+++++||++++.++++++++|++
T Consensus 293 daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~ 372 (512)
T cd07124 293 DADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEI 372 (512)
T ss_pred CCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCC--CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 237 GVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
+++ |+++++||..... .|+|+.|||+.++++++.+++||+||||++|++|+|+|||++++|++++||++||||+|.+
T Consensus 373 a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~ 451 (512)
T cd07124 373 GKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPE 451 (512)
T ss_pred HHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 988 8999999976432 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017060 315 TANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
.+.++++++++|.|+||+.... .+.+||||+|+||+| +++|.+|+++||+.|++++++
T Consensus 452 ~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 452 HLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTENF 512 (512)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEeC
Confidence 9999999999999999986533 467899999999999 788999999999999998864
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-81 Score=622.81 Aligned_cols=364 Identities=46% Similarity=0.803 Sum_probs=343.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+.......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+
T Consensus 100 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l 179 (467)
T TIGR01804 100 IADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKV 179 (467)
T ss_pred HHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHH
Confidence 56789999999888776654433234568999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+++|+.|.+.+++ ++||+++|+|||||+||++|||++
T Consensus 180 ~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~~~~lElGG~~~~iV~~dADl~ 258 (467)
T TIGR01804 180 AELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLKHVTMELGGKSPLIVFDDADLE 258 (467)
T ss_pred HHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEecCCCCeeEECCCCCHH
Confidence 9999999999999999998767889999999999999999999999999998886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++.+|
T Consensus 259 ~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 338 (467)
T TIGR01804 259 LAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEG 338 (467)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||.... ..|+|+.|||+.++++++++++||+||||++|++|+|.|||++++|++++||+++|||+|.+++.
T Consensus 339 a~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~ 418 (467)
T TIGR01804 339 ATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAH 418 (467)
T ss_pred CEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 99999997532 25899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 366 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k 366 (378)
++++++++|+|+||+++...+.+||||+|+||+|+++|.+|+++||+.|
T Consensus 419 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 419 RVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999998777778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=622.44 Aligned_cols=369 Identities=36% Similarity=0.608 Sum_probs=345.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 99 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~ 178 (478)
T cd07086 99 MIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIA 178 (478)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence 46778999998888776554322 34456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc----CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 81 VSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 81 l~~~l~~a----glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++++|.++ |+|+|+++++++++. .+..|..|+++|.|.||||+++++.|.+.+++ +++|+++|+|||||+||++
T Consensus 179 l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~p~iV~~ 256 (478)
T cd07086 179 VTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVAR-RFGRVLLELGGNNAIIVMD 256 (478)
T ss_pred HHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCcEEeecCCCCcEEEcC
Confidence 99999999 999999999998654 88899999999999999999999999998887 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++|++
T Consensus 257 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 336 (478)
T cd07086 257 DADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEI 336 (478)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCC--CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 237 GVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++|+++++||+.... .|+|++|||+.++++++.++++|+||||++|++|+|+|||++++|+++|||++||||+|.+
T Consensus 337 a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~ 416 (478)
T cd07086 337 AKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416 (478)
T ss_pred HHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 99999999999976433 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--cceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 315 TANTLMRA--LRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~--l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++ +++|+|+||+.... .+.+||||+|.||+|+++|.+++++|++.|++++++
T Consensus 417 ~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07086 417 EAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 477 (478)
T ss_pred HHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEeC
Confidence 99999999 99999999987543 467899999999999999999999999999998864
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-81 Score=621.31 Aligned_cols=365 Identities=35% Similarity=0.554 Sum_probs=340.6
Q ss_pred HHHHHHHHHHHHhhhcCccCC-----CCCCcceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCCh
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 75 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~ 75 (378)
+++.++|++..+++..++..+ ...+...+..++|+ |||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 100 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 179 (472)
T TIGR03250 100 VADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTP 179 (472)
T ss_pred HHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 567899999998877665432 11234568899998 999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+++.++.++|.++|+|+|++|++++.+.+.+..|++|++++.|.||||+.+|+.|.+.++ ++|+++|+|||||+||+
T Consensus 180 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~~lElGGk~p~iV~ 256 (472)
T TIGR03250 180 LSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG---YRRQVLELGGNDPLIVM 256 (472)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc---CCceEEecCCCCeEEEC
Confidence 999999999999999999999999877778999999999999999999999999988764 57999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++..++++++++++
T Consensus 257 ~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~ 336 (472)
T TIGR03250 257 EDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVN 336 (472)
T ss_pred CCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|.+||++++|++++||++||||+|.++
T Consensus 337 ~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~ 413 (472)
T TIGR03250 337 EAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDY 413 (472)
T ss_pred HHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHH
Confidence 999999999999864 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+.++++++++|+|+||+.+... +.+||||+|.||+| +++|.+||++|++.|++++++
T Consensus 414 ~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 414 ITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred HHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEeC
Confidence 9999999999999999876443 55899999999999 567899999999999998763
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-81 Score=627.31 Aligned_cols=370 Identities=30% Similarity=0.452 Sum_probs=343.9
Q ss_pred HHHHHHHHHHHHhhhcCccC-CCCCCcceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++|++.+++++.++.. ....+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 135 ~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~ 213 (533)
T TIGR01236 135 LIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNY 213 (533)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHH
Confidence 47889999999988876544 223455678999999 999999999999999999999999 899999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCC------cceeecCCCCcEE
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFI 153 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~------~v~~e~gG~~~~i 153 (378)
+++++|.++|+|+|++|+++|++.+.++.|+.||+++.|.||||+++|+.|++.+++ .++ ++++|+|||||+|
T Consensus 214 ~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~-~l~~~~~~~~v~lElGGknp~I 292 (533)
T TIGR01236 214 LTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVAS-NLDRYHNFPRIVGETGGKDFHV 292 (533)
T ss_pred HHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh-hccccccCCcEEEEcCCCCeEE
Confidence 999999999999999999999777889999999999999999999999999999887 555 4999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.++++++.++
T Consensus 293 V~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~ 372 (533)
T TIGR01236 293 VHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKY 372 (533)
T ss_pred ECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCC--CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHH-HcCCCCceEEE
Q 017060 234 IRSGVDGG--AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGV 308 (378)
Q Consensus 234 i~~a~~~g--a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v 308 (378)
+++++++| +++++||......|+|++|||+.+++++|++++||+||||++|++|+| ++||++++ |+++|||+++|
T Consensus 373 i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~V 452 (533)
T TIGR01236 373 IERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAV 452 (533)
T ss_pred HHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEE
Confidence 99999987 799999976444689999999999999999999999999999999998 59999999 88999999999
Q ss_pred ecCCHHHHHHHHHHcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeCC
Q 017060 309 FTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 309 ~s~d~~~~~~~~~~l~--~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
||+|.+.+.+++++++ +|.|+||+.... .+.+||||+|.||+| +++|.+||++|++.|++....-
T Consensus 453 ft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~~ 522 (533)
T TIGR01236 453 FAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETFV 522 (533)
T ss_pred EeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEcc
Confidence 9999999999999977 999999976543 467899999999998 8999999999999999988753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=618.72 Aligned_cols=364 Identities=33% Similarity=0.488 Sum_probs=340.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++..++++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 86 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~ 165 (455)
T cd07148 86 AIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPL 165 (455)
T ss_pred HHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccH
Confidence 46788999998888766543321 2345688999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.++.++|.++|+|+|++++++++ .+.++.|++|+++|.|.||||+++|+.|.+.++. .+|+++|+|||||+||++
T Consensus 166 ~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~~p~iV~~ 242 (455)
T cd07148 166 SCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGAAPVIVDR 242 (455)
T ss_pred HHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCCCceEECC
Confidence 9999999999999999999999984 4678999999999999999999999999998875 489999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++.+++++++++|++
T Consensus 243 dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 322 (455)
T cd07148 243 SADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNE 322 (455)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||... .++|++|||+.+++++|.+++||+||||++|++|+|++||++++|++++||++||||+|.+.+
T Consensus 323 a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~ 400 (455)
T cd07148 323 AVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVA 400 (455)
T ss_pred HHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 999999999999754 478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 317 NTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
.++++++++|.|+||++.... +.+||||+|.||+|+++|.+++++|++.|++.+
T Consensus 401 ~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 401 LKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 999999999999999876443 468999999999999999999999999999853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=621.81 Aligned_cols=369 Identities=41% Similarity=0.719 Sum_probs=348.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+
T Consensus 124 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l 203 (494)
T PRK09847 124 AARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRL 203 (494)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHH
Confidence 56789999999988877665544455668999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc-CH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DV 160 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da-dl 160 (378)
++++.++|+|+|++|++++.+.+.+..|+.|+++|.|.||||+.+|+.|.+.++..+++|+.+|+||+||+||++|+ |+
T Consensus 204 ~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl 283 (494)
T PRK09847 204 AGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDL 283 (494)
T ss_pred HHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCH
Confidence 99999999999999999997778889999999999999999999999999988744789999999999999999997 99
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++.+++|+|.++++.+||+++..+++++.++|++++++
T Consensus 284 ~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ 363 (494)
T PRK09847 284 QQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESK 363 (494)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
| ++++||... ..+.|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||++||||+|.+.+.+++
T Consensus 364 G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~ 441 (494)
T PRK09847 364 G-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMS 441 (494)
T ss_pred C-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9 999998753 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|++.++.
T Consensus 442 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 493 (494)
T PRK09847 442 RRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL 493 (494)
T ss_pred HhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEec
Confidence 9999999999998777778999999999999999999999999999998753
|
|
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=618.87 Aligned_cols=367 Identities=48% Similarity=0.830 Sum_probs=347.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.+++++.+++++.++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 85 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~ 164 (457)
T cd07114 85 LAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLE 164 (457)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHH
Confidence 56789999988887766554433 45567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
++++|.++|+|+|+++++++++.+.+..|.+|++++.|.||||+++++.+++.+++ +++|+++|+|||||+||++|||+
T Consensus 165 l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dAdl 243 (457)
T cd07114 165 LAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVFDDADL 243 (457)
T ss_pred HHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEECCCCCH
Confidence 99999999999999999999777788999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.|++++|.++||.|++++++|||++++++|+++|.++++++++|+|.++++++||+++++++++++++|++++++
T Consensus 244 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 323 (457)
T cd07114 244 DAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREE 323 (457)
T ss_pred HHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||.... ..|+|++|||+.++++++.++++|+||||++|++|+|.|||++++|++++||++||||+|.+.+
T Consensus 324 ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~ 403 (457)
T cd07114 324 GARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARA 403 (457)
T ss_pred CCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHH
Confidence 999999997543 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++++|+|+||+.+...+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 404 ~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 404 HRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred HHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999998777788999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=620.79 Aligned_cols=367 Identities=42% Similarity=0.722 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 99 ~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~ 178 (468)
T cd07088 99 TADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178 (468)
T ss_pred HHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 56788999999888777655433 35567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|+++|+|+|+++++++++.+.++.|+.|+++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 179 l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~iV~~dadl 257 (468)
T cd07088 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NITKVSLELGGKAPAIVMKDADL 257 (468)
T ss_pred HHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCH
Confidence 99999999999999999999777788999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++.+||+++.+++++++++|++++++
T Consensus 258 ~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 337 (468)
T cd07088 258 DLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEA 337 (468)
T ss_pred HHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 GAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|++||++++|++++||++||||+|.++++++
T Consensus 338 ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~ 417 (468)
T cd07088 338 GATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRA 417 (468)
T ss_pred CCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 999999997643 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++|.|+||+.....+..||||+|.||+|+++|.+|+++||+.|++.
T Consensus 418 ~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 418 TNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 99999999999997765566799999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-80 Score=616.38 Aligned_cols=363 Identities=45% Similarity=0.741 Sum_probs=340.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.+++++..+. .++..+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+
T Consensus 83 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l 160 (446)
T cd07106 83 AVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKL 160 (446)
T ss_pred HHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 4667788887763 22223323355678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++ +|+|+++++++ +.+.+..|.+|+++|.|.||||+++++.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 161 ~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~dADl~ 237 (446)
T cd07106 161 GELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDID 237 (446)
T ss_pred HHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECCCCCHH
Confidence 9999996 99999999998 45688999999999999999999999999998886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||+++++++++++++++++..+|
T Consensus 238 ~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 317 (446)
T cd07106 238 AVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKG 317 (446)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||......|+|+.|||+.+++++|.++++|+||||++|++|+|++||++++|++++||++||||+|.+.++++++
T Consensus 318 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~ 397 (446)
T cd07106 318 AKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVAR 397 (446)
T ss_pred CEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999998654468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 398 ~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 398 RLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred hCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 999999999998877888999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-80 Score=615.51 Aligned_cols=363 Identities=39% Similarity=0.639 Sum_probs=341.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH-HH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~-~~ 80 (378)
+++.+++++.+++...+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..
T Consensus 77 ~i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~ 156 (443)
T cd07152 77 AIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVV 156 (443)
T ss_pred HHHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHH
Confidence 56788899988766655554444566678999999999999999999999999999999999999999999999996 78
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++ +.+.+..|+.|+++|.|.||||+.+++.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 157 l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl 234 (443)
T cd07152 157 IARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADL 234 (443)
T ss_pred HHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCH
Confidence 99999999999999999998 56788999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++..+++++.++|++++++
T Consensus 235 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 314 (443)
T cd07152 235 DLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAA 314 (443)
T ss_pred HHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||.. +|+|++|||+.+++++|+++++|+||||++|++|+|++||++++|++++||++||||+|.+++.+++
T Consensus 315 Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~ 391 (443)
T cd07152 315 GARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALA 391 (443)
T ss_pred CCEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHH
Confidence 9999999974 4899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 017060 321 RALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~ 369 (378)
+++++|.|+||++.... +.+||||+|.||+| +++|.+||++|++.|++.
T Consensus 392 ~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 392 DRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 99999999999876543 67999999999999 888999999999999885
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-80 Score=616.42 Aligned_cols=366 Identities=38% Similarity=0.587 Sum_probs=340.0
Q ss_pred HHHHHHHHHHHHhhhcCccC-CC--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTA-PA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++..+.++.+... +. ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~ 161 (454)
T cd07101 82 VAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTA 161 (454)
T ss_pred HHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 46778999988887654432 21 1234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
..+.+++.++|+|+|+++++++.+.+.++.|++| ++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++||
T Consensus 162 ~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dA 238 (454)
T cd07101 162 LWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIVLEDA 238 (454)
T ss_pred HHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEECCCC
Confidence 9999999999999999999999877888999987 5889999999999999999887 789999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++.++++++++++++++
T Consensus 239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~ 318 (454)
T cd07101 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAV 318 (454)
T ss_pred CHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 239 DGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 239 ~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
++|+++++||.... ..|+|+.|||+.+++++|.+++||+||||++|++|+|+|||++++|++++||++||||+|.+++.
T Consensus 319 ~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~ 398 (454)
T cd07101 319 AKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGR 398 (454)
T ss_pred HCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99999999987432 25799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 318 TLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~---~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 399 RIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 999999999999998643 35678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-80 Score=617.10 Aligned_cols=365 Identities=42% Similarity=0.683 Sum_probs=345.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~ 164 (451)
T cd07150 85 TPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLK 164 (451)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHH
Confidence 46778999999888776655543 45667899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++.+.+.+..|+.|+++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 165 l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~iV~~dadl 243 (451)
T cd07150 165 IAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLIVLADADL 243 (451)
T ss_pred HHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEECCCCCh
Confidence 99999999999999999998777889999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.++++++++++++++++
T Consensus 244 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 323 (451)
T cd07150 244 DYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAK 323 (451)
T ss_pred HHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||.. .|+|++|||+.++++++.++++|+||||++|++|+|++||++++|+++|||++||||+|.+++++++
T Consensus 324 Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~ 400 (451)
T cd07150 324 GAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLA 400 (451)
T ss_pred CCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 9999999864 4899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 321 RALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++|.|+||++... .+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 401 ~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 401 ERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 9999999999998654 3678999999999999999999999999999853
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-80 Score=622.35 Aligned_cols=370 Identities=35% Similarity=0.549 Sum_probs=344.9
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++++..++..+ ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..
T Consensus 133 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~ 212 (511)
T TIGR01237 133 AIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAK 212 (511)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 467889999998887665432 2345567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEEc
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV~ 155 (378)
+.++|.++|+|+|++|++++.+.+.++.|+.||+++.|.||||+++|+.|++.++. .+++|+++|+|||||+||+
T Consensus 213 l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~ 292 (511)
T TIGR01237 213 IVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVD 292 (511)
T ss_pred HHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEEC
Confidence 99999999999999999999777889999999999999999999999999988773 3689999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++++
T Consensus 293 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~ 372 (511)
T TIGR01237 293 ESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIE 372 (511)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++| ++++||......|+|+.|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 373 ~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~ 451 (511)
T TIGR01237 373 QGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDH 451 (511)
T ss_pred HHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence 999888 7888887544468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~-~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||+.... .+.+||||+|.||+|+ ++|.+++++||+.|++..++
T Consensus 452 ~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 452 IERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTENI 511 (511)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEeC
Confidence 999999999999999987543 3568999999999995 78999999999999998763
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-80 Score=618.00 Aligned_cols=370 Identities=43% Similarity=0.729 Sum_probs=346.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..++...++..+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 101 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 180 (478)
T cd07131 101 AIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALK 180 (478)
T ss_pred HHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHH
Confidence 46678899988887766554422 23457899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
++++|.++|+|+|+++++++.+.+.+..|++|+++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 181 l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dADl 259 (478)
T cd07131 181 LVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR-PNKRVALEMGGKNPIIVMDDADL 259 (478)
T ss_pred HHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeEEECCCCCH
Confidence 99999999999999999999777789999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|+++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||++++.+++++++++++++++
T Consensus 260 ~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 339 (478)
T cd07131 260 DLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEE 339 (478)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||.... ..|+|+.|||+.+++++++++++|+||||++|++|+|++||++++|++++||++||||+|.+++
T Consensus 340 Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a 419 (478)
T cd07131 340 GATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKA 419 (478)
T ss_pred CCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHH
Confidence 999999997532 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++++|+|+||+.... .+.+||||+|+||+| +++|.+|+++|++.|+|++++
T Consensus 420 ~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07131 420 FRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVDY 477 (478)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEeC
Confidence 99999999999999987653 578999999999999 888999999999999998864
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-80 Score=614.17 Aligned_cols=366 Identities=35% Similarity=0.550 Sum_probs=344.5
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..+++..+.. .+...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~ 161 (452)
T cd07102 82 MLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGER 161 (452)
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 4567889998888765543 333455667889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|+++|+|+|++|++++++ +.+..|+.|++++.|.||||+++|+.|++.+++ .++|+.+|+|||||+||++|||+
T Consensus 162 l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~dADl 239 (452)
T cd07102 162 FAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRPDADL 239 (452)
T ss_pred HHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcCCCCH
Confidence 9999999999999999999966 788999999999999999999999999998886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|+++||.|++++++|||++++|+|+++|++++.++++|+|.++++++||+++.++++++++++++++++
T Consensus 240 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 319 (452)
T cd07102 240 DAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK 319 (452)
T ss_pred HHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCccc---CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 241 GAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 241 ga~~~~gg~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
|+++++||... ...|+|+.|||+.+++++|.++++|+||||++|++|+|.+||++++|+++|||+++|||+|.+++.
T Consensus 320 ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 320 GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99999998753 236899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|+|+||+....++.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 400 ~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 400 ALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 9999999999999998766778999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-80 Score=617.01 Aligned_cols=365 Identities=43% Similarity=0.709 Sum_probs=343.0
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.+.. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~ 182 (471)
T cd07139 103 PAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYL 182 (471)
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHH
Confidence 5678899999887765422 232234567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+.+++.|.+.+++ +++|+++|+||+||+||++|||+
T Consensus 183 l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~~~~~~lElGG~np~iV~~dADl 260 (471)
T cd07139 183 LAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-RLARVTLELGGKSAAIVLDDADL 260 (471)
T ss_pred HHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCEEEEEcCCCCeeEECCCCCH
Confidence 99999999999999999998 55688999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++.+
T Consensus 261 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 340 (471)
T cd07139 261 DAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAE 340 (471)
T ss_pred HHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 241 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 241 ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
|+++++||.... ..|+|+.|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.+.+
T Consensus 341 ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~ 420 (471)
T cd07139 341 GARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLA 420 (471)
T ss_pred CCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 999999997543 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++|.|+||+.. .++.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 421 ~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 421 VARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 9999999999999866 5678999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-80 Score=614.25 Aligned_cols=362 Identities=41% Similarity=0.670 Sum_probs=341.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++.++++..++..+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 85 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~ 164 (453)
T cd07094 85 AIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPL 164 (453)
T ss_pred HHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchH
Confidence 46788999999888876654322 2456688899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.+++++|.++|+|+|+++++++++.++++.|++||++|.|.||||+++++.|.+.+ .++|+++|+|||||+||++
T Consensus 165 ~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~~~iV~~ 241 (453)
T cd07094 165 SALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNAPVIVDR 241 (453)
T ss_pred HHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCCceEECC
Confidence 9999999999999999999999997777899999999999999999999999998876 4689999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++++++++
T Consensus 242 dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 321 (453)
T cd07094 242 DADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEE 321 (453)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||.. .|+|++|||+.+++++|.++++|+||||++|++|+|++||++++|+++|||++||||+|.+++
T Consensus 322 a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a 398 (453)
T cd07094 322 AVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVA 398 (453)
T ss_pred HHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHH
Confidence 99999999999864 478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
.++++++++|+|+||++... .+.+||||+|+||+|+++|.+|+++|++.|+++
T Consensus 399 ~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 399 FKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred HHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 99999999999999997654 578999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=615.59 Aligned_cols=370 Identities=29% Similarity=0.419 Sum_probs=338.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+.....++..+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l 180 (487)
T PRK09457 101 MINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELT 180 (487)
T ss_pred HHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHH
Confidence 45677888877766655443322345578999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|+++++++ +.+.+..|+.|+++|.|.||||+++|+.|.+.++.+..+++++|+|||||+||++|||++
T Consensus 181 ~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~ 259 (487)
T PRK09457 181 VKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADID 259 (487)
T ss_pred HHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHH
Confidence 9999999999999999998 567899999999999999999999999999987764567889999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccch-HHHHHHHHHHHhhcccCCCC-CCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
.|++.+++++|.++||.|++++|+|||++++ |+|+++|.++++++++|+|. ++++++||+++.++++++.++++++++
T Consensus 260 ~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 339 (487)
T PRK09457 260 AAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLA 339 (487)
T ss_pred HHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 99999999999999999996 788999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||...+..|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 340 ~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~ 418 (487)
T PRK09457 340 LGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQF 418 (487)
T ss_pred CCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 999999988654446899999999 6889999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 017060 320 MRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
++++++|.|+||+.... .+.+||||+|.||+|+++|..+ .+|++.|++..+...
T Consensus 419 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~ 473 (487)
T PRK09457 419 LLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDS 473 (487)
T ss_pred HHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEeccc
Confidence 99999999999986543 4678999999999999999555 559999999988644
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=617.41 Aligned_cols=368 Identities=35% Similarity=0.584 Sum_probs=344.4
Q ss_pred HHHHHHHHHHHHhhhcCccC--CCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++||+.++.+..+... +...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 198 (500)
T cd07083 119 AIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGY 198 (500)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHH
Confidence 56789999999888766542 2234556788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC------CcceeecCCCCcEE
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL------KPVTLELGGKSPFI 153 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~------~~v~~e~gG~~~~i 153 (378)
.+.++|.++|+|+|+++++++.+.+.+..|+.|+++|.|.||||+.+|+.|.+.+++ ++ +|+++|+|||||+|
T Consensus 199 ~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~-~~~~~~~~~~v~lElgG~~~~i 277 (500)
T cd07083 199 KVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR-LAPGQTWFKRLYVETGGKNAII 277 (500)
T ss_pred HHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh-ccccccccCcEEEecCCCCeEE
Confidence 999999999999999999999777889999999999999999999999999998886 44 89999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++
T Consensus 278 V~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~ 357 (500)
T cd07083 278 VDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSY 357 (500)
T ss_pred ECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecC
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTH 311 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~ 311 (378)
+++++++| ++++||......|+|+.|||+.+++++|.+++||+||||++|++|+ |++||++++|+++|||+++|||+
T Consensus 358 i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~ 436 (500)
T cd07083 358 IEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSR 436 (500)
T ss_pred HHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeC
Confidence 99998887 8999997655568999999999999999999999999999999999 99999999999999999999999
Q ss_pred CHHHHHHHHHHcceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 017060 312 NLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 312 d~~~~~~~~~~l~~g~v~vN~~~~~~--~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~ 371 (378)
|.+.+.++++++++|+|+||+.+... +.+||||+|.||+| +++|.+++++|++.|+++.+
T Consensus 437 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 437 KREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 99999999999999999999975543 56899999999999 68999999999999999875
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-79 Score=613.11 Aligned_cols=362 Identities=45% Similarity=0.717 Sum_probs=339.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++..++.+..+.. ....+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l 176 (466)
T cd07138 101 GIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIIL 176 (466)
T ss_pred HHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHH
Confidence 35577888887766644322 23457889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++++.+.+..|+.|++++.|.||||+++|+.|.+.++. +++|+++|+|||||+||++|||++
T Consensus 177 ~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~~p~iV~~dADl~ 255 (466)
T cd07138 177 AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TVKRVALELGGKSANIILDDADLE 255 (466)
T ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEECCCCCHH
Confidence 9999999999999999998777789999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|
T Consensus 256 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~G 335 (466)
T cd07138 256 KAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEG 335 (466)
T ss_pred HHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 242 AKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 242 a~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+++++||.... ..|+|+.|||+.++++++++++||+||||++|++|+|.|||++++|+++|||+++|||+|.+++++
T Consensus 336 a~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~ 415 (466)
T cd07138 336 ARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARA 415 (466)
T ss_pred CEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 99999996432 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++|+|+||+.. .++.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 416 ~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 416 VARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999999864 5678999999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-79 Score=610.72 Aligned_cols=365 Identities=43% Similarity=0.713 Sum_probs=343.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.+++++..++.+.+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~ 163 (450)
T cd07092 84 AVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLL 163 (450)
T ss_pred HHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 5678889998887776543321 123456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.+ |+|+|+++++++++.+.++.|++|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 164 l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~~dAdl 241 (450)
T cd07092 164 LAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADL 241 (450)
T ss_pred HHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEECCCCCH
Confidence 9999999 999999999998777788999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++++++++++++|+++. +
T Consensus 242 ~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ 320 (450)
T cd07092 242 DAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-A 320 (450)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|++|||+.++++++.++++|+||||++|++|+|.||||+++|++++||++||||+|.+.+++++
T Consensus 321 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~ 400 (450)
T cd07092 321 HARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLS 400 (450)
T ss_pred CCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999865557899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++|.|+||++....+.+||||+|+||+|+++|.+++++|++.|++.
T Consensus 401 ~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 401 ARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 9999999999998777788999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-79 Score=617.68 Aligned_cols=368 Identities=38% Similarity=0.589 Sum_probs=341.8
Q ss_pred HHHHHHHHHHHHhhhcCccCC-C--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.++++..+.... . ......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 118 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~ 197 (524)
T PRK09407 118 VALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTA 197 (524)
T ss_pred HHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence 456789999988876554321 1 1124678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
..+.++|.++|+|+|+++++++.+.+.++.|++| +|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++||
T Consensus 198 ~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~-~~~~v~lElGGknp~iV~~dA 274 (524)
T PRK09407 198 LAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGR-RLIGFSLELGGKNPMIVLDDA 274 (524)
T ss_pred HHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceeEECCCC
Confidence 9999999999999999999999777888889876 7899999999999999998887 789999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++
T Consensus 275 Dl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~ 354 (524)
T PRK09407 275 DLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAV 354 (524)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 239 DGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 239 ~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
++|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|+||||+++|++++||++||||+|.+++.
T Consensus 355 ~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~ 434 (524)
T PRK09407 355 AKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGR 434 (524)
T ss_pred hCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 99999999997432 25799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 318 TLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~---~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|.|+||+... .++.+||||+|.||+|+++|.+|+++|++.|+|.++.
T Consensus 435 ~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 435 AIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred HHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 999999999999998643 3467899999999999999999999999999998764
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-79 Score=605.56 Aligned_cols=364 Identities=32% Similarity=0.451 Sum_probs=336.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++..+.++.+.......+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l 143 (431)
T cd07095 64 MAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELM 143 (431)
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHH
Confidence 45678888888877765543333456788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++ +.+.+..|++|+++|.|.||||+++|+.|.+.++.+..+++.+|+|||||+||++|||++
T Consensus 144 ~~~~~~ag~P~g~~~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~ 222 (431)
T cd07095 144 VELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADID 222 (431)
T ss_pred HHHHHHhCcChhHheEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 456789999999999999999999999999987764578999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
.|++.+++++|.|+||.|++++++|||++ ++|+|+++|.++++++++|+|.++++.+||+++.++++++.+++++++++
T Consensus 223 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ 302 (431)
T cd07095 223 AAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLAL 302 (431)
T ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||...+..|+|++|||+ +++++|.+++||+||||++|++|+|++||++++|++++||++||||+|.+.+.+++
T Consensus 303 ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~ 381 (431)
T cd07095 303 GGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFL 381 (431)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 99999999765557899999999 68888999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 017060 321 RALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~ 368 (378)
+++++|.|+||+.... .+.+||||+|.||+|+++|.+|+++|+ .|++
T Consensus 382 ~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~ 429 (431)
T cd07095 382 ARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA 429 (431)
T ss_pred HhCCcceEEECCCCCCCCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence 9999999999986543 466899999999999999999999554 4443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-79 Score=608.42 Aligned_cols=362 Identities=40% Similarity=0.617 Sum_probs=339.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++.++....++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 82 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 161 (451)
T cd07146 82 AADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPL 161 (451)
T ss_pred HHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchH
Confidence 56889999998877766543321 2445688999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++..+.++|.++|+|+|+++++++++.+++..|++|+++|.|+||||+.+++.|.+.++ .+|+++|+|||||+||++
T Consensus 162 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~p~iV~~ 238 (451)
T cd07146 162 SAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGNDPLIVMD 238 (451)
T ss_pred HHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCceEEECC
Confidence 99999999999999999999999877788999999999999999999999999988764 578999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||++++.+++++++++++
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~ 318 (451)
T cd07146 239 DADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEE 318 (451)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||.. .|+|++|||+.+++++|.++++|+||||++|++|+|+|||++++|+++|||+++|||+|.+++
T Consensus 319 a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 395 (451)
T cd07146 319 AIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTI 395 (451)
T ss_pred HHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999864 489999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCC-CCcchHHHHHhhhhceEEE
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ-GREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~-g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|.+|+++|++.|+++
T Consensus 396 ~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 396 KRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred HHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999999987544 46789999999995 8999999999999999885
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-79 Score=610.02 Aligned_cols=365 Identities=40% Similarity=0.614 Sum_probs=341.5
Q ss_pred HHHHHHHHHHHHhhhcCcc-CC-C--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLT-AP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++++.+.. .+ . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~ 161 (453)
T cd07099 82 ALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLV 161 (453)
T ss_pred HHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 5677899999887765432 22 1 135567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+..++++|.++|+|+|+++++++++ +.+..|++| ++|.|.||||+++++.|.+.+++ +++|+++|+|||||+||++|
T Consensus 162 ~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~d 238 (453)
T cd07099 162 GELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMIVLAD 238 (453)
T ss_pred HHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEEECCC
Confidence 9999999999999999999999965 678888887 59999999999999999999887 68999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||++++.++++++++++++
T Consensus 239 adl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a 318 (453)
T cd07099 239 ADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA 318 (453)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++|+++++||......|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|++++||++||||+|.++++
T Consensus 319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 398 (453)
T cd07099 319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE 398 (453)
T ss_pred HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHH
Confidence 99999999999764346899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 318 TLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999999999998754 3578999999999999999999999999999885
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-79 Score=616.25 Aligned_cols=368 Identities=38% Similarity=0.587 Sum_probs=341.8
Q ss_pred HHHHHHHHHHHHhhhc-CccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQ-GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+.+++++. ++......+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..
T Consensus 137 ~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~ 216 (514)
T PRK03137 137 AIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAK 216 (514)
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 4678899999887764 322222345567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-----CCCcceeecCCCCcEEEc
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-----~~~~v~~e~gG~~~~iV~ 155 (378)
+.++|.++|+|+|+++++++++.+.++.|++|++++.|.||||+++|+.|++.+++. +++|+++|+|||||+||+
T Consensus 217 l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~ 296 (514)
T PRK03137 217 FVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVD 296 (514)
T ss_pred HHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEEC
Confidence 999999999999999999997778899999999999999999999999999988741 578999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++. ++||+++++++++++++|+
T Consensus 297 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~ 375 (514)
T PRK03137 297 EDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIE 375 (514)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++ +++++||......|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||++||||+|.++
T Consensus 376 ~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~ 454 (514)
T PRK03137 376 IGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREH 454 (514)
T ss_pred HHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99887 69999997655568999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 017060 316 ANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++++|+|+||+.+.. .+.+||||+|.||+| +++|.+++++||+.|++...
T Consensus 455 a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 455 LEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred HHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence 999999999999999986533 366899999999999 69999999999999999765
|
|
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-81 Score=621.48 Aligned_cols=366 Identities=50% Similarity=0.806 Sum_probs=344.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l 172 (462)
T PF00171_consen 93 AIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLL 172 (462)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHH
T ss_pred hhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccc
Confidence 57889999999999877665555678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++|+|+|+++++++++.+.+..|++||+++.|.||||+++++.|.+.+++ +++|+++|+|||||+||++|||+|
T Consensus 173 ~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~lelgG~~p~iV~~daDld 251 (462)
T PF00171_consen 173 AELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLELGGKNPVIVDPDADLD 251 (462)
T ss_dssp HHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEEECEEEEEEE-TTSHHH
T ss_pred hhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-ccccccccccccceeeEecccccc
Confidence 9999999999999999999888999999999999999999999999999999886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|+++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.++++++++++++++.+|
T Consensus 252 ~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 331 (462)
T PF00171_consen 252 KAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEG 331 (462)
T ss_dssp HHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTT
T ss_pred cccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCC---cccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 242 AKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 242 a~~~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+++++|| ......|+|++|||+.+++++|+++++|+||||++|++|+|++|+++++|++++||+++|||+|.+.+++
T Consensus 332 a~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~ 411 (462)
T PF00171_consen 332 AKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAER 411 (462)
T ss_dssp SEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccccc
Confidence 9999999 3345678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCC-CCccCCCCCCCCCcchHHHHHhhhhceEE
Q 017060 319 LMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 368 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~-~pfgG~~~sG~g~~~g~~~l~~~~~~k~~ 368 (378)
+++++++|+|+||+++..... +||||+|.||+|+++|.+||++|++.|+|
T Consensus 412 ~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 412 LARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred ccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999999999999998776555 59999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-79 Score=605.24 Aligned_cols=364 Identities=41% Similarity=0.686 Sum_probs=342.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh-HH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-AL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~-~~ 79 (378)
+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +.
T Consensus 64 ~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~ 143 (431)
T cd07104 64 AIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGL 143 (431)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHH
Confidence 46778899988877666554433 45667899999999999999999999999999999999999999999999988 56
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcC
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dad 159 (378)
.+.++|.++|+|+|+++++++++.+.+..|+.|++++.|.||||+++++.|++.+++ +++|+++|+|||||+||++|+|
T Consensus 144 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 144 LIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCC
Confidence 899999999999999999999777788999999999999999999999999999887 7899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++.|++.+++++|.++||.|++++++|||++++|+|+++|.+++..+++|+|.++++++||++++.+++++.+++++++.
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~ 302 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVA 302 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|+|||++++|++++||++||||+|.+.++++
T Consensus 303 ~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 379 (431)
T cd07104 303 AGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAF 379 (431)
T ss_pred CCCEEEeCCCC---CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 99999999864 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 320 MRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++|+|+||+++.. .+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 380 ~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 380 AERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred HHhcCcCeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 99999999999998654 378999999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-79 Score=607.98 Aligned_cols=367 Identities=47% Similarity=0.740 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..+++..++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~ 162 (451)
T cd07103 83 AASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALA 162 (451)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHH
Confidence 46778899888887776655433 45678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++++.+.++.|++|+++|.|.||||+.+++.|.+.+++ +++|+++|+|||||+||++|||+
T Consensus 163 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl 241 (451)
T cd07103 163 LAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVFDDADL 241 (451)
T ss_pred HHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCH
Confidence 99999999999999999999777788999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.|+++++||+++..+++++.+++++++++
T Consensus 242 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ 321 (451)
T cd07103 242 DKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAK 321 (451)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|+.|||+.++++++.++++|+||||++|++|+|.+||++++|++++||++||||+|.+.+++++
T Consensus 322 ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 401 (451)
T cd07103 322 GAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVA 401 (451)
T ss_pred CCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999765446899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++|.|+||+.....+.+||||+|.||+|+++|++++++||+.|+++
T Consensus 402 ~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 402 EALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999998877788999999999999999999999999999885
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-79 Score=608.33 Aligned_cols=366 Identities=46% Similarity=0.760 Sum_probs=343.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++.+.++..+...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l 163 (457)
T cd07108 84 LADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLL 163 (457)
T ss_pred HHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHH
Confidence 46788999998887776655543455668899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.+++.++ +|+|+++++++.+.+.++.|++|+++|.|.||||+.+++.|++.+++ +++|+++|+|||||+||++|||++
T Consensus 164 ~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~~dAdl~ 241 (457)
T cd07108 164 AEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFPDADLD 241 (457)
T ss_pred HHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEECCCCCHH
Confidence 9999997 99999999998777788999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHH-HhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh-
Q 017060 162 KAAELAHYA-LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD- 239 (378)
Q Consensus 162 ~aa~~i~~~-~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~- 239 (378)
.|++.++++ +|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++++++++
T Consensus 242 ~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 321 (457)
T cd07108 242 DAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLST 321 (457)
T ss_pred HHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhC
Confidence 999999999 599999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 240 GGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 240 ~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+|+++++||.... ..|+|+.|||+.+++++|.+++||+||||++|++|+|++||++++|++++||++||||+|.++
T Consensus 322 ~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~ 401 (457)
T cd07108 322 SGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGR 401 (457)
T ss_pred CCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHH
Confidence 9999999997532 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHH-HHhhhhceEEE
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAVV 369 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~-l~~~~~~k~~~ 369 (378)
++++++++++|.|+||+.....+.+||||+|.||+|+++|.++ +++||+.|++.
T Consensus 402 a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 402 ALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred HHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 9999999999999999987667789999999999999999977 79999999885
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-79 Score=606.86 Aligned_cols=362 Identities=38% Similarity=0.594 Sum_probs=337.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-----CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++..+.+..++..+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~ 164 (452)
T cd07147 85 AIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPL 164 (452)
T ss_pred HHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 4567889998887766554321 13445678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.+++++|.++|+|+|++++++++ .+.+..|+.|+++|.|.||||+.+|+.|.+.++. +|+++|+|||||+||++
T Consensus 165 ~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~~p~iV~~ 240 (452)
T cd07147 165 SALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAAVIVDS 240 (452)
T ss_pred HHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCCCcEEECC
Confidence 9999999999999999999999984 4678899999999999999999999999987653 69999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.++++++++++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 320 (452)
T cd07147 241 DADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNE 320 (452)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||.. .|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|++++||++||||+|.+++
T Consensus 321 a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a 397 (452)
T cd07147 321 AVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKA 397 (452)
T ss_pred HHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999875 489999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++++++|+|+||+.+.. .+.+||||+|+||+|+++|.+|+++|++.|++.+
T Consensus 398 ~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 398 LRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 99999999999999987654 4678999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-79 Score=601.81 Aligned_cols=363 Identities=39% Similarity=0.632 Sum_probs=338.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++..++++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 64 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~ 143 (432)
T cd07105 64 AAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWL 143 (432)
T ss_pred HHHHHHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHH
Confidence 56788999998877655444422 34567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCC---chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 81 VSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~---~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.+++.++|+|+|++|+++++ +.+++..|++|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|
T Consensus 144 l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 144 IGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCC
Confidence 999999999999999999974 23578899999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++| ++++||++++.++++++++++++
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a 297 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDA 297 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988 57899999999999999999999
Q ss_pred hhCCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 238 VDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
+++|+++++||.... ..|+|+.|||+.+++++|.+++||+||||++|++|+|.+||++++|++++||++||||+|.+.+
T Consensus 298 ~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~ 377 (432)
T cd07105 298 LSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARA 377 (432)
T ss_pred HHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 999999999997643 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++++++|+|+||++... .+.+||||+|.||+|+++|.+|+++|++.|++.+
T Consensus 378 ~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 378 LAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 99999999999999997654 4789999999999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-78 Score=606.98 Aligned_cols=367 Identities=31% Similarity=0.449 Sum_probs=341.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.++..+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 102 ~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~ 181 (477)
T TIGR01722 102 GLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVK 181 (477)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHH
Confidence 45678899988887776554322 34456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+|+++++++ +.+.+..|+.||+++.|+||||+.+++.|.+.++. .+||+++|+||+||+||++|||+
T Consensus 182 l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~-~~~~v~lElGG~n~~iV~~dADl 259 (477)
T TIGR01722 182 LAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA-HGKRVQALGGAKNHMVVMPDADK 259 (477)
T ss_pred HHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCceEECCCCCH
Confidence 99999999999999999998 45668889999999999999999999999998876 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++|+|||+++ ++|+++|+++++++++|+|.++++++||+++.+++++++++|++++++
T Consensus 260 ~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 338 (477)
T TIGR01722 260 DAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAE 338 (477)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCccc--C--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERL--G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~--~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||... . ..|+|++|||+.+++++|.++++|+||||++|++|+|++||++++|+++|||++||||+|.+++
T Consensus 339 Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 418 (477)
T TIGR01722 339 GAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAA 418 (477)
T ss_pred CCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 99999999752 1 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|.|+||+.... .+.+||||+|.||+| +++|.+++++||+.|+++++
T Consensus 419 ~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 419 RRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred HHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 99999999999999985433 467899999999999 58899999999999999876
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-79 Score=606.91 Aligned_cols=353 Identities=48% Similarity=0.787 Sum_probs=331.8
Q ss_pred HHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHH
Q 017060 3 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 82 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~ 82 (378)
++.+++++.+++...+ ....++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.
T Consensus 125 ~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 194 (480)
T cd07111 125 ARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFA 194 (480)
T ss_pred HHHHHHHHHHHHHhcC----------CcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHH
Confidence 4556666666654321 245689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHH
Q 017060 83 KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDK 162 (378)
Q Consensus 83 ~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~ 162 (378)
++++++|+|+|+++++++.+ +.+..|+.|+++|.|.||||+.+|+.|.+.+++ .++|+++|+|||||+||++|+|++.
T Consensus 195 ~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~ 272 (480)
T cd07111 195 EICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAG-TGKKLSLELGGKSPFIVFDDADLDS 272 (480)
T ss_pred HHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-cCCcEEEEcCCCceEEECCCCCHHH
Confidence 99999999999999999854 678899999999999999999999999998887 7899999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCC
Q 017060 163 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242 (378)
Q Consensus 163 aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga 242 (378)
|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|++++++|+
T Consensus 273 aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga 352 (480)
T cd07111 273 AVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGA 352 (480)
T ss_pred HHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHH
Q 017060 243 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 322 (378)
Q Consensus 243 ~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~ 322 (378)
++++||......|+|+.|||+.++++++.+++||+||||++|++|+|.+|||+++|++++||++||||+|.+.+.+++++
T Consensus 353 ~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~ 432 (480)
T cd07111 353 DVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALS 432 (480)
T ss_pred EEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 99998875444689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 017060 323 LRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 367 (378)
Q Consensus 323 l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~ 367 (378)
+++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 433 l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 433 LKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred CCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999999999987777789999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-78 Score=604.29 Aligned_cols=367 Identities=47% Similarity=0.839 Sum_probs=345.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|+++.+.+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l 163 (455)
T cd07093 84 AAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLL 163 (455)
T ss_pred HHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHH
Confidence 45678888888777555444444566778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++.+.+.+..|+.|++++.|.||||+.+++.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 164 ~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dAdl~ 242 (455)
T cd07093 164 AELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFADADLD 242 (455)
T ss_pred HHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECCCCCHH
Confidence 9999999999999999998777888999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||+++.++++++.++|++++.+|
T Consensus 243 ~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~g 322 (455)
T cd07093 243 RAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEG 322 (455)
T ss_pred HHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||.... ..|+|+.|||+.++++++.++++|+||||++|++|+|.+||++++|+.++||++||||+|.+.++
T Consensus 323 a~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~ 402 (455)
T cd07093 323 ATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAH 402 (455)
T ss_pred CEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 99999997543 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 403 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 403 RVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 9999999999999998777778999999999999999999999999999885
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-78 Score=605.75 Aligned_cols=368 Identities=34% Similarity=0.477 Sum_probs=338.9
Q ss_pred HHHHHHHHHHHHhhhcCc--cCC-----C-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCC
Q 017060 2 TTRLFRYYAGWADKIQGL--TAP-----A-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 73 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--~~~-----~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~ 73 (378)
+++.++|++.++.+...+ ..+ . ..+...+.+|+|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 117 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~ 196 (496)
T PLN00412 117 SGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQ 196 (496)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 457789998887665432 221 1 11234578899999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 74 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 74 ~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
+|.++..++++|.++|+|+|++|++++++.+.++.|..|++++.|.|||| .+|+.|.+.++ ++|+++|+|||||+|
T Consensus 197 t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~---~~~~~lElGG~~p~i 272 (496)
T PLN00412 197 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG---MVPLQMELGGKDACI 272 (496)
T ss_pred CcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC---CCcEEEEcCCCceEE
Confidence 99999999999999999999999999877788999999999999999999 99999988764 689999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.+ ++++||+++.+++++++++
T Consensus 273 V~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~ 351 (496)
T PLN00412 273 VLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGL 351 (496)
T ss_pred EcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 7899999999999999999
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
|++++.+|+++++++.. .|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||++||||+|.
T Consensus 352 i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~ 428 (496)
T PLN00412 352 VMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 428 (496)
T ss_pred HHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 99999999999987753 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCC
Q 017060 314 DTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 377 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~~~ 377 (378)
+++.++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|++++++..+.+
T Consensus 429 ~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~~~~~~ 493 (496)
T PLN00412 429 NKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493 (496)
T ss_pred HHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEecCCCCc
Confidence 9999999999999999999754 345789999999999999999999999999999988765543
|
|
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-78 Score=603.61 Aligned_cols=368 Identities=34% Similarity=0.574 Sum_probs=338.1
Q ss_pred HHHHHHHHHHHHhhhcCc-cCCCC---CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..+++.... ..+.. .+...++.++|+|||++|+|||||+..++.++++||++||+||+|||+.+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~ 162 (465)
T cd07098 83 TCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWS 162 (465)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHH
Confidence 467788888877664332 22222 13456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH----HHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 78 ALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 78 ~~~l~~~----l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
+..++++ |.++|+|+|++|++++++ +.++.|+.|++++.|.||||+++++.|.+.+++ +++|+++|+|||||+|
T Consensus 163 ~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~~~~i 240 (465)
T cd07098 163 SGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 9876555 568999999999999955 789999999999999999999999999999887 7899999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++..+++|+|.++++++||++++++++++.++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEe
Q 017060 234 IRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 309 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 309 (378)
+++++.+|+++++||.... ..|+|+.|||+.++++++.++++|+||||++|++|+|.+||++++|++++||++|||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999986432 258999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 310 THNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 310 s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
|+|.+.++++++++++|.|+||+.+. ..+.+||||+|.||+|+++|.+++++|++.|++.++
T Consensus 401 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 99999999999999999999998653 347899999999999999999999999999999775
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-78 Score=604.00 Aligned_cols=369 Identities=29% Similarity=0.418 Sum_probs=336.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.......++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 99 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l 178 (484)
T TIGR03240 99 MIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEET 178 (484)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHH
Confidence 45677888877766655443222234568889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.+++.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+++|+.|.+.++....+++++|+|||||+||++|||++
T Consensus 179 ~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~ 257 (484)
T TIGR03240 179 VKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADID 257 (484)
T ss_pred HHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 567889999999999999999999999999987764567899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccch-HHHHHHHHHHHhhcccCCC-CCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
.|++.+++++|.++||.|+++++||||++++ |+|+++|.++++++++|+| .|+++++||+++.++++++.++++++++
T Consensus 258 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 337 (484)
T TIGR03240 258 AAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLA 337 (484)
T ss_pred HHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999985 9999999999999999997 5788999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||...+..++|++|||+ +++++|.++++|+||||++|++|+|++||++++|+++|||++||||+|.++++++
T Consensus 338 ~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~ 416 (484)
T TIGR03240 338 LGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRF 416 (484)
T ss_pred CCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 999999988754446799999999 5888999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 320 MRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++++|.|+||+... ..+.+||||+|.||+|+++|.++++ |++.|++++++.
T Consensus 417 ~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~~ 470 (484)
T TIGR03240 417 LLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEAD 470 (484)
T ss_pred HHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEecc
Confidence 9999999999998654 3467899999999999999976655 999999999963
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-78 Score=596.51 Aligned_cols=362 Identities=32% Similarity=0.463 Sum_probs=332.7
Q ss_pred HHHHHHHHHHHHhhhcCcc---CCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..+.+..+.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~ 143 (432)
T cd07137 64 LVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPAT 143 (432)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHH
Confidence 5678899998876655431 111 123356789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.+++++|.++ +|+|++|+++| +.+.+..|++| +++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|
T Consensus 144 ~~~l~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~d 219 (432)
T cd07137 144 SALLAKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDST 219 (432)
T ss_pred HHHHHHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCC
Confidence 99999999995 99999999998 55678888887 69999999999999999998886 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHh-hcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 158 ADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 158 adl~~aa~~i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
||++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.+++.+++.|+| ++++++||++++.+++++.++|++
T Consensus 220 Adl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~ 298 (432)
T cd07137 220 VDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDD 298 (432)
T ss_pred CCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHH
Confidence 999999999999999 599999999999999999999999999999999999999 568999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++. |+++++||... ..|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 299 a~~-ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a 376 (432)
T cd07137 299 PSV-ADKIVHGGERD-EKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELK 376 (432)
T ss_pred HHh-CCeEEeCCCcC-CCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 988 89999998753 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 317 NTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 377 ~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 377 RRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred HHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence 9999999999999998654 34778999999999999999999999999998853
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-78 Score=597.08 Aligned_cols=359 Identities=33% Similarity=0.508 Sum_probs=331.8
Q ss_pred HHHHHHHHHHHHhhhcCc-cCCCC---CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++.+.+. ..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~ 142 (449)
T cd07136 63 VLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNT 142 (449)
T ss_pred HHHHHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHH
Confidence 467899999988876543 22211 24467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+..+.+++.++ +|+|+++++++ +.+.+..|+.|+ +|.|.||||+++|+.|++.+++ .++|+++|+|||||+||++|
T Consensus 143 ~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~d 218 (449)
T cd07136 143 SKVIAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDED 218 (449)
T ss_pred HHHHHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCC
Confidence 99999999998 99999999998 556688888765 9999999999999999998886 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|.+++++++.|+|.+ ++++||++++.++++++++|+++
T Consensus 219 ADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a 297 (449)
T cd07136 219 ANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG 297 (449)
T ss_pred CCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999987 88999999999999999999863
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
++++||... ..|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 298 -----~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~ 371 (449)
T cd07136 298 -----KIVFGGNTD-RETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEK 371 (449)
T ss_pred -----eEEECCCcC-CCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 899998753 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 318 TLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++|.|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 372 ~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 372 KVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred HHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 999999999999998754 347889999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-78 Score=600.14 Aligned_cols=364 Identities=29% Similarity=0.422 Sum_probs=335.3
Q ss_pred HHHHHHHHHHHHhhhcCcc---CC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLT---AP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++...+.. .+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~ 150 (484)
T PLN02203 71 LTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPAT 150 (484)
T ss_pred HHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHH
Confidence 4677899998877765431 11 1234467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC-
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE- 156 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~- 156 (378)
+.++.+++.++ +|+|++|+++| +.+++..|+.| .+|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 151 ~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d 226 (484)
T PLN02203 151 SAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSL 226 (484)
T ss_pred HHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccC
Confidence 99999999996 99999999998 77889999999 49999999999999999999887 7899999999999999997
Q ss_pred --CcCHHHHHHHHHHHHhh-cCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 157 --DADVDKAAELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 157 --dadl~~aa~~i~~~~~~-~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|+|++.|++.+++++|. |+||.|++++|+|||++++|+|+++|.+++.++++|+|.++ +++||+++.+++++++++
T Consensus 227 ~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~ 305 (484)
T PLN02203 227 SSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNL 305 (484)
T ss_pred CCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHH
Confidence 69999999999999996 89999999999999999999999999999999999999886 689999999999999999
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
|++++.+ +++++||.. +..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 306 i~~a~~~-~~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~ 383 (484)
T PLN02203 306 LKDPRVA-ASIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNE 383 (484)
T ss_pred HHHHHhC-CeEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 9999876 788888875 23689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 314 DTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++.++++++++|.|+||++.. ..+.+||||+|+||+|+++|.+++++|++.|++.++.
T Consensus 384 ~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 384 KLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 9999999999999999998743 3477899999999999999999999999999998773
|
|
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-78 Score=604.41 Aligned_cols=364 Identities=27% Similarity=0.339 Sum_probs=327.5
Q ss_pred HHHHHHHHHHHHhhhcC--------ccCCCCC-C-cceeeeeee-ceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADKIQG--------LTAPADG-P-YHVQTLHEP-IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+.+++++.+ +..+... + ...++.++| +|||++|+|||||+...++++++||++||+||+||
T Consensus 100 ~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKP 179 (513)
T cd07128 100 GIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKP 179 (513)
T ss_pred HHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 57889999999887652 2222111 2 235678999 59999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCC
Q 017060 71 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGG 148 (378)
Q Consensus 71 s~~~~~~~~~l~~~l~~ag-lP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG 148 (378)
|+.+|+++.+++++|.++| +|+|++++++|++.++...+ +++|.|.||||+++|+.|++.++ ..+++|+++|+||
T Consensus 180 s~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGG 256 (513)
T cd07128 180 ATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADS 256 (513)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccC
Confidence 9999999999999999999 99999999998644443332 57899999999999999999753 2378999999999
Q ss_pred CCcEEEcCCcC-----HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCC
Q 017060 149 KSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 223 (378)
Q Consensus 149 ~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~ 223 (378)
|||+||++||| ++.+++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++
T Consensus 257 knp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~ 336 (513)
T cd07128 257 LNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVS 336 (513)
T ss_pred cCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCC
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhCCCeEeeCCccc-------CCCCeeeeceeeccCCC--cccccccccccceEEeeecCCHHHHH
Q 017060 224 SEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYKDLDEVI 294 (378)
Q Consensus 224 ~~~~~~~~~~i~~a~~~ga~~~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai 294 (378)
+.++++++++|++++++ +++++||... ...|+|++|||+.++++ ++.+++||+||||++|++|+|++|++
T Consensus 337 ~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai 415 (513)
T cd07128 337 REQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAI 415 (513)
T ss_pred HHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHH
Confidence 99999999999999988 9999999652 13589999999998886 48999999999999999999999999
Q ss_pred HHHHcCCCCceEEEecCCHHHHHHHHHHcc--eeEEEEcCCCC---------CCCCCCccCCCCCCCCCc-chHHHHHhh
Q 017060 295 QRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV---------FDAAIPFGGYKQSGQGRE-KGSYSLSNY 362 (378)
Q Consensus 295 ~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g~v~vN~~~~---------~~~~~pfgG~~~sG~g~~-~g~~~l~~~ 362 (378)
+++|+++|||++||||+|.+++++++++|+ +|+|+||+.+. ..+.+||||+|.||+|++ +|.+++++|
T Consensus 416 ~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~ 495 (513)
T cd07128 416 ELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHY 495 (513)
T ss_pred HHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHh
Confidence 999999999999999999999999999997 99999998642 235789999999999999 479999999
Q ss_pred hhceEEE
Q 017060 363 LQVKAVV 369 (378)
Q Consensus 363 ~~~k~~~ 369 (378)
++.|++.
T Consensus 496 ~~~k~v~ 502 (513)
T cd07128 496 MQRTAVQ 502 (513)
T ss_pred heeeeee
Confidence 9999883
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-78 Score=595.17 Aligned_cols=362 Identities=32% Similarity=0.462 Sum_probs=333.8
Q ss_pred HHHHHHHHHHHHhhhcCccC-CC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTA-PA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++...+... .. ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+
T Consensus 64 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 143 (434)
T cd07133 64 SIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRT 143 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHH
Confidence 56788999988876554332 11 124457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++.++|.++ +|+|+++++++ +.+.+..|..++ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 144 ~~~l~~l~~~a-lP~g~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~d 219 (434)
T cd07133 144 SALLAELLAEY-FDEDEVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPD 219 (434)
T ss_pred HHHHHHHHHHh-CCcCeEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCC
Confidence 99999999997 99999999998 456788888765 9999999999999999998886 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+ ++++++||+++++++++++++|+++
T Consensus 220 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a 297 (434)
T cd07133 220 ADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDA 297 (434)
T ss_pred CCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999886 4678999999999999999999999
Q ss_pred hhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 238 VDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|+|.+||++++|++++||++||||+|.++
T Consensus 298 ~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~ 377 (434)
T cd07133 298 RAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAE 377 (434)
T ss_pred HhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 999999999887533 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 316 ANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++++|.|+||++.. .++.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus 378 a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 378 QDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred HHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 99999999999999998753 3478999999999999999999999999999884
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-78 Score=601.67 Aligned_cols=362 Identities=31% Similarity=0.493 Sum_probs=331.5
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|+++..+++.... ... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 72 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t 151 (493)
T PTZ00381 72 TVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHT 151 (493)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHH
Confidence 3566788888777654322 111 123457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++.+++.++ +|+|++++++| +.+.+..|++|+ +|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 152 ~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~d 227 (493)
T PTZ00381 152 SKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKS 227 (493)
T ss_pred HHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCC
Confidence 99999999996 99999999998 667888899887 9999999999999999998887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.+.++++. |++.++++++||+++.+++++++++++
T Consensus 228 Adl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~-- 304 (493)
T PTZ00381 228 CNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK-- 304 (493)
T ss_pred CCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH--
Confidence 99999999999999999999999999999999999999999999999986 766688999999999999999999997
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
++|+++++||..+ ..++|+.|||+.+++++|.+++||+||||++|++|+|++|||+++|++++||++||||+|.+.++
T Consensus 305 -~~ga~~~~gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~ 382 (493)
T PTZ00381 305 -DHGGKVVYGGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKE 382 (493)
T ss_pred -hCCCcEEECCCcC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHH
Confidence 3688999999753 35789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 318 TLMRALRVGSVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~--~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|.|+||+.. ...+.+||||+|.||+|+++|.+|+++||+.|++..+.
T Consensus 383 ~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 383 LVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred HHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 99999999999999864 34578999999999999999999999999999998774
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-78 Score=595.58 Aligned_cols=359 Identities=32% Similarity=0.463 Sum_probs=331.9
Q ss_pred HHHHHHHHHHHHhhhcCc-cCCCC----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGL-TAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++||+..++++... ..... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 70 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~ 149 (436)
T cd07135 70 VKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPH 149 (436)
T ss_pred HHHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 567889999988776432 22211 2446788999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++..+.+++.+ |+|+|+++++++.+.+.+ .|+.|+ +|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 150 ~~~~l~~l~~~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~ 225 (436)
T cd07135 150 TAALLAELVPK-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTK 225 (436)
T ss_pred HHHHHHHHHHH-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECC
Confidence 99999999999 699999999998665554 588999 9999999999999999998876 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+| ++++++||+++.++++++.+++++
T Consensus 226 dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~ 304 (436)
T cd07135 226 NADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDT 304 (436)
T ss_pred CCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999998
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
+ |+++++||.... .|+|++|||+.++++++.++++|+||||++|++|+|+||||+++|++++||++||||+|.+.+
T Consensus 305 a---g~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a 380 (436)
T cd07135 305 T---KGKVVIGGEMDE-ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEI 380 (436)
T ss_pred c---CCeEEECCCcCC-CCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 7 789999997643 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 317 NTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 381 ~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 381 DHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred HHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 9999999999999998653 3578999999999999999999999999999874
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-77 Score=603.34 Aligned_cols=369 Identities=31% Similarity=0.459 Sum_probs=341.2
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++++..+.. .+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 133 ~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 212 (518)
T cd07125 133 AIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAAR 212 (518)
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHH
Confidence 4677899999888766443 444446677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC--CCCcceeecCCCCcEEEcCCc
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~--~~~~v~~e~gG~~~~iV~~da 158 (378)
++++|.++|+|+|+++++++++.+.+..|++|+++|.|.||||+++++.|++.++++ .++|+++|+|||||+||++||
T Consensus 213 l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dA 292 (518)
T cd07125 213 AVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTA 292 (518)
T ss_pred HHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCC
Confidence 999999999999999999997666889999999999999999999999999987752 378999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.++||.|++++++|||++++|+|+++|.+++.++++|+|.++++++||++++++++++++++++++
T Consensus 293 Dl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 372 (518)
T cd07125 293 LPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMR 372 (518)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
. ++++++||......|+|+.|||+.++ +|.+++||+||||++|++|+ |++|||+++|++++||++||||+|.+.+
T Consensus 373 ~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~ 449 (518)
T cd07125 373 G-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREI 449 (518)
T ss_pred h-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHH
Confidence 7 46888888753336899999999887 88999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhhceEEEEeCC
Q 017060 317 NTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~-~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++++|.|+||+.... .+.+||||+|.||+|+ ++|.+++++||+.|++.+++.
T Consensus 450 ~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 450 EYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEcc
Confidence 99999999999999987643 3678999999999995 788999999999999998863
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-77 Score=594.57 Aligned_cols=362 Identities=45% Similarity=0.699 Sum_probs=338.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-----CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|+++.++++.++..+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~ 164 (453)
T cd07149 85 AIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPL 164 (453)
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchH
Confidence 4677888888887776654331 12334578899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.++.++|.++|+|+|+++++++++.+++..|++|+++|.|.||||+++++.|.+.++ ++|+++|+|||||+||++
T Consensus 165 ~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk~p~iV~~ 241 (453)
T cd07149 165 SALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDA 241 (453)
T ss_pred HHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCCceEEECC
Confidence 99999999999999999999999877777899999999999999999999999988753 679999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++.+++|+|.++++++||++++.+++++++++++
T Consensus 242 dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~ 321 (453)
T cd07149 242 DADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEE 321 (453)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++.+|+++++||.. .|+|+.|||+.++++++.++++|+||||++|++|+|++||++++|++++||++||||+|.+.+
T Consensus 322 a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~ 398 (453)
T cd07149 322 AVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKA 398 (453)
T ss_pred HHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHH
Confidence 99999999999864 478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
.++++++++|+|+||+.+.. .+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 399 ~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 399 LKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999999987654 467899999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-77 Score=612.23 Aligned_cols=366 Identities=25% Similarity=0.323 Sum_probs=329.5
Q ss_pred HHHHHHHHHHHHhhhc--------CccCCCC-C-Ccceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADKIQ--------GLTAPAD-G-PYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+..+++.. ++..+.. . +...++.++|+ |||++|+|||||+..+++++++||++||+||+||
T Consensus 100 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KP 179 (663)
T TIGR02278 100 GIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKP 179 (663)
T ss_pred HHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5788999999887632 3333322 1 23468999997 9999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCC
Q 017060 71 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGG 148 (378)
Q Consensus 71 s~~~~~~~~~l~~~l~~ag-lP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG 148 (378)
|+.+|+++.+++++|.++| +|+|++|+++++.. ..+..++++|.|.||||+++|+.|++.++ ..+++|+++|+||
T Consensus 180 s~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~---~~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGG 256 (663)
T TIGR02278 180 ATPTAYVAEALVRTMVESGLLPEGSLQLICGSAG---DLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADS 256 (663)
T ss_pred CCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChH---HHHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCC
Confidence 9999999999999999999 99999999998532 23333467899999999999999998743 2378999999999
Q ss_pred CCcEEEcCCcC-----HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCC
Q 017060 149 KSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 223 (378)
Q Consensus 149 ~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~ 223 (378)
|||+||++||| ++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++
T Consensus 257 k~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~ 336 (663)
T TIGR02278 257 LNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS 336 (663)
T ss_pred CCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCC
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcc-cccccccccceEEeeecCCHHHHHHHHHcCCC
Q 017060 224 SEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM-LIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302 (378)
Q Consensus 224 ~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 302 (378)
++++++++++|++++++|+++++||.... .|+|++|||+.+++++| .+++||+||||++|++|+|.+||++++|+++|
T Consensus 337 ~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~ 415 (663)
T TIGR02278 337 LEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGG 415 (663)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCcCC-CCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCC
Confidence 99999999999999999999999997532 58999999999988875 78999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHHHc--ceeEEEE-cCC-------C-CCCCCCCccCCCCCCCCCc-chHHHHHhhhhceEEEE
Q 017060 303 GLAAGVFTHNLDTANTLMRAL--RVGSVWI-NCF-------D-VFDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 303 gl~~~v~s~d~~~~~~~~~~l--~~g~v~v-N~~-------~-~~~~~~pfgG~~~sG~g~~-~g~~~l~~~~~~k~~~~ 370 (378)
||++||||+|.+.+++++++| ++|.|+| |+. . ...+.+||||+|+||+|++ +|.+++++|++.|++..
T Consensus 416 gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 416 SLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence 999999999999999999999 7999999 641 1 1235689999999999999 46899999999999976
Q ss_pred e
Q 017060 371 A 371 (378)
Q Consensus 371 ~ 371 (378)
.
T Consensus 496 ~ 496 (663)
T TIGR02278 496 S 496 (663)
T ss_pred C
Confidence 5
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-76 Score=593.95 Aligned_cols=365 Identities=37% Similarity=0.529 Sum_probs=342.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|+++.++++.++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 103 ~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~ 182 (473)
T cd07082 103 TIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL 182 (473)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 46778999988888766543321 3456789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.++.++|.++|+|+|+++++++.+.+.++.|.+|+++|.|.||||+++++.|.+.++ ++|+++|+||+||+||++
T Consensus 183 ~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelgg~n~~iV~~ 259 (473)
T cd07082 183 LGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP---MKRLVLELGGKDPAIVLP 259 (473)
T ss_pred HHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC---CCcEEEEcCCCCeEEECC
Confidence 99999999999999999999999977778999999999999999999999999998765 689999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++.++++++++++++
T Consensus 260 dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~ 339 (473)
T cd07082 260 DADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDD 339 (473)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||... .|+|+.||++.+++++++++++|+||||++|++|+|++|+++++|++++||++||||+|.+.+
T Consensus 340 a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 417 (473)
T cd07082 340 AVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKA 417 (473)
T ss_pred HHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHH
Confidence 999999999999753 389999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
.++++++++|+|+||++.... +.+||||+|.||+|+++|.+|+++|++.|++.++
T Consensus 418 ~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 418 RKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence 999999999999999976543 5689999999999999999999999999999764
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-77 Score=586.82 Aligned_cols=363 Identities=36% Similarity=0.503 Sum_probs=335.3
Q ss_pred HHHHHHHHHHHHhhhcCc-cCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGL-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..+....+. ..+. ..+...++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~ 142 (433)
T cd07134 63 VLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHT 142 (433)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHH
Confidence 356778888776554332 1211 134567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++.++++++ +|+|+++++++ +.+.+..|++|+ ++.|.||||+.+|+.|.+.+++ .++|+++|+|||||+||++|
T Consensus 143 ~~~~~~~~~~a-~p~g~v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~d 218 (433)
T cd07134 143 SAVIAKIIREA-FDEDEVAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDET 218 (433)
T ss_pred HHHHHHHHHHh-CCcCEEEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCC
Confidence 99999999999 99999999998 557888899987 9999999999999999998886 67899999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCC-CCCCccccccCCHHHHHHHHHHHHH
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++.++.|+| .+.++++||++++.++++++++|++
T Consensus 219 AD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~ 298 (433)
T cd07134 219 ADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDD 298 (433)
T ss_pred CCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988887 8899999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|+++++|++++||++||||+|.+.+
T Consensus 299 a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 377 (433)
T cd07134 299 AVAKGAKVEFGGQFD-AAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANV 377 (433)
T ss_pred HHhCCCEEEeCCCcC-CCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 999999999999753 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 317 NTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++++++|.|+||+.+. ..+.+||||+|+||+|+++|.+++++||+.|++.
T Consensus 378 ~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 378 NKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred HHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 9999999999999998754 3477999999999999999999999999999884
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-76 Score=591.70 Aligned_cols=366 Identities=26% Similarity=0.338 Sum_probs=325.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC---------CCcceeeeeee-ceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCC
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD---------GPYHVQTLHEP-IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 71 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P-~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps 71 (378)
+++.++||+.+++.+.++..... ........++| +|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 105 ~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs 184 (521)
T PRK11903 105 GIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPA 184 (521)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 57899999999887765332110 12234677899 699999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCCC
Q 017060 72 EQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGK 149 (378)
Q Consensus 72 ~~~~~~~~~l~~~l~~ag-lP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG~ 149 (378)
+.+|+++..+.+++.++| +|+|++++++|++.++...| +++|.|.||||+++|+.|++.++ ..+++|+++|+|||
T Consensus 185 ~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGk 261 (521)
T PRK11903 185 TATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSL 261 (521)
T ss_pred CcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeecccc
Confidence 999999999999999999 99999999998665554444 78999999999999999998643 23689999999999
Q ss_pred CcEEEcCCcC-----HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCH
Q 017060 150 SPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 224 (378)
Q Consensus 150 ~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~ 224 (378)
||+||++|+| ++.+++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.
T Consensus 262 np~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~ 341 (521)
T PRK11903 262 NSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSR 341 (521)
T ss_pred CceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCH
Confidence 9999999999 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhCCCeEeeCCccc------CCCCeeeeceeeccCCC--cccccccccccceEEeeecCCHHHHHHH
Q 017060 225 EQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYKDLDEVIQR 296 (378)
Q Consensus 225 ~~~~~~~~~i~~a~~~ga~~~~gg~~~------~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~ 296 (378)
.++++++++|+.. .+|+++++||... ...|+|++|||+.++++ ++.+++||+||||++|++|+|++|++++
T Consensus 342 ~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~ 420 (521)
T PRK11903 342 AQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALAL 420 (521)
T ss_pred HHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHH
Confidence 9999999999965 5799999999642 12489999999987654 4788999999999999999999999999
Q ss_pred HHcCCCCceEEEecCCHHHHHHHHHHc--ceeEEEEcCCCC---------CCCCCCccCCCCCCCCCcc-hHHHHHhhhh
Q 017060 297 SNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------FDAAIPFGGYKQSGQGREK-GSYSLSNYLQ 364 (378)
Q Consensus 297 ~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v~vN~~~~---------~~~~~pfgG~~~sG~g~~~-g~~~l~~~~~ 364 (378)
+|+++|||++||||+|.++++++++++ ++|+|+||+... ..+.+||||+|.||+|+++ |.+++++||+
T Consensus 421 ~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~ 500 (521)
T PRK11903 421 ARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHR 500 (521)
T ss_pred HhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhc
Confidence 999999999999999999999999999 899999997532 2357899999999999985 5899999999
Q ss_pred ceEEEEe
Q 017060 365 VKAVVTA 371 (378)
Q Consensus 365 ~k~~~~~ 371 (378)
.|++...
T Consensus 501 ~~~~~~~ 507 (521)
T PRK11903 501 RSAVQAS 507 (521)
T ss_pred cceeeCC
Confidence 8877543
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-76 Score=581.42 Aligned_cols=361 Identities=32% Similarity=0.458 Sum_probs=328.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCC----CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++++++.+.....+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 142 (443)
T cd07132 63 VKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPAT 142 (443)
T ss_pred HHHHHHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHH
Confidence 4567889988877765432221 123457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+..+.++|.++ +|+|+++++++++.. ...++. +++|.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|
T Consensus 143 ~~~l~~~~~~~-lp~gv~~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~d 218 (443)
T cd07132 143 AKLLAELIPKY-LDKECYPVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKS 218 (443)
T ss_pred HHHHHHHHHHh-CCcCeEEEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCC
Confidence 99999999986 999999999995444 556665 589999999999999999998876 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.++||.|++++++|||++++|+|+++|.+++++++.|+| ++++++||++++++++++++++++
T Consensus 219 ADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~- 296 (443)
T cd07132 219 CDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG- 296 (443)
T ss_pred CCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999998888 788999999999999999999974
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||... ..++|+.|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||++||||+|.+.+.
T Consensus 297 ----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~ 371 (443)
T cd07132 297 ----GKVAIGGQTD-EKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVIN 371 (443)
T ss_pred ----CEEEeCCccC-CCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHH
Confidence 4888988753 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 318 TLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++++++|.|+||++... .+.+||||+|+||+|+++|.+||++|++.|++.++++
T Consensus 372 ~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 372 KILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred HHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 9999999999999987533 4678999999999999999999999999999987754
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-75 Score=621.15 Aligned_cols=368 Identities=35% Similarity=0.506 Sum_probs=342.6
Q ss_pred HHHHHHHHHHHHhhhcCc--cCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGL--TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
++++++||+.+++++.+. .++...+..++..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.
T Consensus 649 aid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~ 728 (1038)
T PRK11904 649 AVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAA 728 (1038)
T ss_pred HHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHH
Confidence 688999999999887654 245556788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC--CCCcceeecCCCCcEEEcCC
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~--~~~~v~~e~gG~~~~iV~~d 157 (378)
.+.++|.++|+|+|++|+++|++.+++..|+.||+++.|.||||+++++.|.+.++++ ..+|+++|+|||||+||++|
T Consensus 729 ~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~d 808 (1038)
T PRK11904 729 EAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDST 808 (1038)
T ss_pred HHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCC
Confidence 9999999999999999999998888999999999999999999999999999988753 25799999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||+|.|++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 809 Adld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a 888 (1038)
T PRK11904 809 ALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERM 888 (1038)
T ss_pred CCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCH
Q 017060 238 VDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
.+ |+++++||..++ ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.
T Consensus 889 ~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~ 965 (1038)
T PRK11904 889 KR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIE 965 (1038)
T ss_pred Hc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCH
Confidence 76 899999987643 2599999999963 567788999999999999998 6999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017060 314 DTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+.++++++++++|+|+||+.... ...+||||+|.||+| +.+|+++|.+|++.|+|+++.
T Consensus 966 ~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 966 ETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred HHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 99999999999999999987553 356799999999999 688999999999999998874
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-75 Score=585.96 Aligned_cols=353 Identities=33% Similarity=0.491 Sum_probs=324.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++..++...+ ...++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 138 ~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l 206 (500)
T TIGR01238 138 AVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206 (500)
T ss_pred HHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHH
Confidence 46778888887755432 1368999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCC--CCcceeecCCCCcEEEcCCcC
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~--~~~v~~e~gG~~~~iV~~dad 159 (378)
.++|.++|+|+|+++++++.+.+.++.|+.|+++|.|+||||+.+++.|.+.++++. .+|+++|+|||||+||++|+|
T Consensus 207 ~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAd 286 (500)
T TIGR01238 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTAL 286 (500)
T ss_pred HHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCC
Confidence 999999999999999999876688999999999999999999999999999888632 279999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++++||+++++++++++++|+++++
T Consensus 287 ld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 366 (500)
T TIGR01238 287 PEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQ 366 (500)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCc---ccCCCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 240 GGAKLETGGE---RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 240 ~ga~~~~gg~---~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
.|+++..++. .....|+|++|||+.+ +++.++++|+||||++|++|+ +++|||+++|++++||++||||+|.+
T Consensus 367 ~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~ 444 (500)
T TIGR01238 367 TQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIET 444 (500)
T ss_pred cCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 9998874432 1223689999999974 678889999999999999998 79999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceE
Q 017060 315 TANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 367 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~ 367 (378)
.+.++++++++|.|+||+.... .+.+||||+|.||+| +++|.+++++|++.|.
T Consensus 445 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 445 TYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500 (500)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhcC
Confidence 9999999999999999986543 356799999999999 7999999999999873
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-76 Score=606.05 Aligned_cols=366 Identities=27% Similarity=0.366 Sum_probs=326.6
Q ss_pred HHHHHHHHHHHHhhhc--------CccCCCC-CC-cceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADKIQ--------GLTAPAD-GP-YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~--------~~~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+.++++.. ++..+.. .+ ...+..++|+ |||++|+|||||+..+++++++||++||+||+||
T Consensus 104 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KP 183 (675)
T PRK11563 104 GIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKP 183 (675)
T ss_pred HHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEEC
Confidence 4678899999886643 3332221 12 2257889997 9999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCC
Q 017060 71 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGG 148 (378)
Q Consensus 71 s~~~~~~~~~l~~~l~~ag-lP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG 148 (378)
|+.+|+++..+.+++.++| +|+|++|+++|+.. ..+..+++++.|.||||+++|+.|++.++ ..+++|+++|+||
T Consensus 184 se~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGG 260 (675)
T PRK11563 184 ATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADS 260 (675)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCC
Confidence 9999999999999999999 99999999998532 33334467999999999999999998532 2378999999999
Q ss_pred CCcEEEcCCcC-----HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCC
Q 017060 149 KSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 223 (378)
Q Consensus 149 ~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~ 223 (378)
|||+||++||| +|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++
T Consensus 261 knp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~ 340 (675)
T PRK11563 261 LNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALAS 340 (675)
T ss_pred cCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcC
Confidence 99999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhCCCeEeeCCccc-------CCCCeeeeceeeccCCC--cccccccccccceEEeeecCCHHHHH
Q 017060 224 SEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYKDLDEVI 294 (378)
Q Consensus 224 ~~~~~~~~~~i~~a~~~ga~~~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai 294 (378)
.+++++++++|++++++ +++++||... ...|+|++|||+.++++ ++.++++|+||||++|++|+|+|||+
T Consensus 341 ~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai 419 (675)
T PRK11563 341 LEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAI 419 (675)
T ss_pred HHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHH
Confidence 99999999999999998 9999999631 13589999999999988 57899999999999999999999999
Q ss_pred HHHHcCCCCceEEEecCCHHHHHHHHHHcc--eeEEEEcCCCC--------C-CCCCCccCCCCCCCCCc-chHHHHHhh
Q 017060 295 QRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV--------F-DAAIPFGGYKQSGQGRE-KGSYSLSNY 362 (378)
Q Consensus 295 ~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g~v~vN~~~~--------~-~~~~pfgG~~~sG~g~~-~g~~~l~~~ 362 (378)
+++|+++|||++||||+|.+.+.+++++++ +|.||||+.+. . .+.+||||+|.||+|++ +|.+++++|
T Consensus 420 ~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f 499 (675)
T PRK11563 420 ELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHY 499 (675)
T ss_pred HHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHh
Confidence 999999999999999999999999999997 99999997532 1 26789999999999999 469999999
Q ss_pred hhceEEEEe
Q 017060 363 LQVKAVVTA 371 (378)
Q Consensus 363 ~~~k~~~~~ 371 (378)
++.|++...
T Consensus 500 ~~~k~~~~~ 508 (675)
T PRK11563 500 MQRTAVQGS 508 (675)
T ss_pred heeeeeecC
Confidence 999988543
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-74 Score=568.10 Aligned_cols=357 Identities=33% Similarity=0.505 Sum_probs=326.3
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++...+.. ... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~ 142 (426)
T cd07087 63 VLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPAT 142 (426)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHH
Confidence 4677889988877654322 111 123457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.+++++|.+ |+|+|++++++++ .+.+..|++|+ ++.|+||||+++++.|.+.+++ +++|+++|+|||||+||++|
T Consensus 143 ~~~l~~~~~~-~~P~gv~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~d 218 (426)
T cd07087 143 SALLAKLIPK-YFDPEAVAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKD 218 (426)
T ss_pred HHHHHHHHHH-hCCCCEEEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCC
Confidence 9999999999 6999999999984 45688899998 9999999999999999998887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.++||.|++++++|||++++|+|+++|.+++++++.++| ++++++||+++.+++++++++++++
T Consensus 219 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a 297 (426)
T cd07087 219 ANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG 297 (426)
T ss_pred CCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999986665 5788999999999999999999864
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
++++||... ..|+|++|||+.+++++|.++++|+||||++|++|+|++||++++|++++||++||||+|.+.++
T Consensus 298 -----~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 371 (426)
T cd07087 298 -----KVVIGGQVD-KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQE 371 (426)
T ss_pred -----eEEeCCccC-CCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 788888653 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 318 TLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus 372 ~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 372 RVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred HHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 999999999999998754 3478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-72 Score=556.82 Aligned_cols=367 Identities=51% Similarity=0.860 Sum_probs=345.8
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.+++++.+++++.+.. .....+...+.+++|+||+++|+|||||+...++.+++||++||+||+|||+.+|.++..
T Consensus 62 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~ 141 (432)
T cd07078 62 AADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALL 141 (432)
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 4677888888888776654 333456678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+++++++++++.+....|.+|+++|.|.||||.++++.|.+.+++ +++|+++|+||+|++||++|+|+
T Consensus 142 l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~ 220 (432)
T cd07078 142 LAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADL 220 (432)
T ss_pred HHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCH
Confidence 99999999999999999998766688999999999999999999999999999887 68999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|++++++|||++++++|+++|.++++++++|+|.|+++++||+++++++++++++|+++.++
T Consensus 221 ~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 300 (432)
T cd07078 221 DAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAE 300 (432)
T ss_pred HHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCC-CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 GAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||..... .|+|++|||+.+++++++++++|+||||++|++|++.+|+++++|+.++||++||||+|.+.++++
T Consensus 301 g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~ 380 (432)
T cd07078 301 GAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRV 380 (432)
T ss_pred CCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHH
Confidence 9999999876533 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 320 MRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++|+|+||+.+.. .+.+||||.|.||+|+++|++|+++|++.|++.
T Consensus 381 ~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 381 AERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HHhcCcceEEECCCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999998777 788999999999999999999999999999885
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-73 Score=605.73 Aligned_cols=353 Identities=32% Similarity=0.494 Sum_probs=327.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++++|||+.+++.... ...++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+
T Consensus 746 aidflryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~l 814 (1318)
T PRK11809 746 AVDFLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQA 814 (1318)
T ss_pred HHHHHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHH
Confidence 68899999988765311 2468999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-----CCCcceeecCCCCcEEEcC
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-----~~~~v~~e~gG~~~~iV~~ 156 (378)
+++|.++|+|+|++|+++|.+.+++..|+.||+|+.|.||||+++|+.|.+.++++ ..+|+++|+||+|++||++
T Consensus 815 v~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVds 894 (1318)
T PRK11809 815 VRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDS 894 (1318)
T ss_pred HHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECC
Confidence 99999999999999999998888999999999999999999999999999988762 1279999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||+|.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.+.++++||+++.++++++.++|++
T Consensus 895 dAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~ 974 (1318)
T PRK11809 895 SALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQA 974 (1318)
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecC
Q 017060 237 GVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTH 311 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~ 311 (378)
++++|++++.++.... ..|+|+.|||+.. +++..+++|+||||++|++|+ +++|+|+++|+++|||+++|||+
T Consensus 975 a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Sr 1052 (1318)
T PRK11809 975 MRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTR 1052 (1318)
T ss_pred HHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeC
Confidence 9999999998875432 4599999999974 567788999999999999996 79999999999999999999999
Q ss_pred CHHHHHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceE
Q 017060 312 NLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 367 (378)
Q Consensus 312 d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~ 367 (378)
|.++++++++++++|+||||+.... ...+||||+|.||+| +.+|+++|.+|++.+.
T Consensus 1053 d~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1053 IDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred CHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 9999999999999999999986543 356799999999999 5899999999998763
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-72 Score=558.23 Aligned_cols=344 Identities=25% Similarity=0.324 Sum_probs=308.3
Q ss_pred HHHHHHHHHHHHhhhcCccC--CC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTA--PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++||+..+++..+... +. ..+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 106 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~ 185 (489)
T cd07126 106 TRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVM 185 (489)
T ss_pred HHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHH
Confidence 57889999988877655432 21 2345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.+++++|.++|+|+|++++++|.+.+ ...++.|++++.|.||||+++|+.|...++ +++.+|+||+||+||++|+
T Consensus 186 ~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da 260 (489)
T cd07126 186 EQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLALELH----GKVKLEDAGFDWKILGPDV 260 (489)
T ss_pred HHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHHHHhC----CCEEeecCCCCceEECCCc
Confidence 99999999999999999999986655 455788999999999999999999987655 4689999999999999999
Q ss_pred -CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccc-hHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 159 -DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 159 -dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|.+.++++++|+ +++||+++.. .+++.+++++
T Consensus 261 ~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~ 334 (489)
T cd07126 261 SDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDK 334 (489)
T ss_pred ccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHH
Confidence 999999999999999999999999999999995 6899999999999999874 4789999998 8999999999
Q ss_pred hhh-CCCeEeeCCcccCC----CC-eeeeceeecc------CCCcccccccccccceEEeeecCC--HHHHHHHHHcCCC
Q 017060 237 GVD-GGAKLETGGERLGA----KG-YYIKPTVFTG------VKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQY 302 (378)
Q Consensus 237 a~~-~ga~~~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~ 302 (378)
+++ +|+++++||..... .+ .|++|||+.. ++++|.+++||+||||++|++|+| ++||++++|+++|
T Consensus 335 a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~ 414 (489)
T cd07126 335 LLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHA 414 (489)
T ss_pred HHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCC
Confidence 997 89999999976432 23 3899999852 567999999999999999999999 9999999999999
Q ss_pred CceEEEecCCHHHHHHHHHHcceeE--EEEcCCCCCCCC----CCccCCCCCCCCCcchH
Q 017060 303 GLAAGVFTHNLDTANTLMRALRVGS--VWINCFDVFDAA----IPFGGYKQSGQGREKGS 356 (378)
Q Consensus 303 gl~~~v~s~d~~~~~~~~~~l~~g~--v~vN~~~~~~~~----~pfgG~~~sG~g~~~g~ 356 (378)
||++||||+|.++++++++++++|. |+||+.....+. .||||+|.||+|+++..
T Consensus 415 gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~ 474 (489)
T cd07126 415 HLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI 474 (489)
T ss_pred CceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHH
Confidence 9999999999999999999999999 669987665544 89999999999987654
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-72 Score=604.26 Aligned_cols=357 Identities=31% Similarity=0.490 Sum_probs=331.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
++++++||+.+++...+ ...++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+
T Consensus 654 aid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l 722 (1208)
T PRK11905 654 AVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARA 722 (1208)
T ss_pred HHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHH
Confidence 57899999998876542 2357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC--CCCcceeecCCCCcEEEcCCcC
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~--~~~~v~~e~gG~~~~iV~~dad 159 (378)
+++|.++|+|+|++|+++|++.+++..|++||+++.|.||||+++++.|.+.++++ ..+|+++|+|||||+||++|||
T Consensus 723 ~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAd 802 (1208)
T PRK11905 723 VRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSAL 802 (1208)
T ss_pred HHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCC
Confidence 99999999999999999998888999999999999999999999999999988863 2589999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+|.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.+.++++||++++++++++.++|+++++
T Consensus 803 le~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~ 882 (1208)
T PRK11905 803 PEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRA 882 (1208)
T ss_pred HHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 240 GGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 240 ~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
.|+.+..++.... ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+.+
T Consensus 883 ~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~ 960 (1208)
T PRK11905 883 AGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETI 960 (1208)
T ss_pred CCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHH
Confidence 9998887764322 4699999999973 567888999999999999997 7999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~--~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|+|+||+..... ..+||||+|.||+| +.+|+++|.+|++.|+++++
T Consensus 961 ~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 961 AHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred HHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 999999999999999876543 56899999999999 59999999999999999765
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-73 Score=521.81 Aligned_cols=358 Identities=30% Similarity=0.457 Sum_probs=322.8
Q ss_pred HHHHHHHHHHhhhcCccCC----CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 4 RLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+.++|+..+.+++...... ..--...++..+|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++.
T Consensus 69 ~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~ 148 (477)
T KOG2456|consen 69 NEIRYALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAK 148 (477)
T ss_pred HHHHHHHHhhHHhccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHH
Confidence 4455665555554332211 112346789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcC
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dad 159 (378)
.+++++.++ ++.+.+.++.|.-++ ...|..+ ++|.|.||||+.+|+.|+.++++ +++||++|+|||+|++|++|+|
T Consensus 149 ~lakllp~Y-ld~~~~~VV~Ggv~E-Tt~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d 224 (477)
T KOG2456|consen 149 LLAKLLPQY-LDQDLIRVVNGGVPE-TTELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCD 224 (477)
T ss_pred HHHHHHHHh-cCcceEEEecCCCch-HHHHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcC
Confidence 999999999 999999999995444 4556655 89999999999999999998887 8999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++-++++|+++++.|+||.|.+|++|+++.+++.+++++++..+++. .|...+++.+++.+++..+++|+...+++.
T Consensus 225 ~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~-- 301 (477)
T KOG2456|consen 225 LKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET-- 301 (477)
T ss_pred HHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC--
Confidence 99999999999999999999999999999999999999999999886 487788899999999999999999999853
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
.+++.||..+. ...|+.|||+.++++++++|+||+||||++|+.+++++|+|+++|+.+-.|++|+||+|.+..+++
T Consensus 302 --~kv~~Gg~~d~-~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~ 378 (477)
T KOG2456|consen 302 --GKVAIGGESDE-SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRF 378 (477)
T ss_pred --CceecCCccch-hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHH
Confidence 57888998654 456999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCC--CCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 320 MRALRVGSVWINCF--DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 320 ~~~l~~g~v~vN~~--~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
.++..+|.|.+|+. +..-..+||||++.||+|+++|++|+++|++.|++..+
T Consensus 379 l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 379 LTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred HHhccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 99999999999994 44567899999999999999999999999999998766
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-71 Score=546.49 Aligned_cols=353 Identities=23% Similarity=0.338 Sum_probs=313.0
Q ss_pred HHHHHHHHHHHHhhhc--CccCCC-------CCCcceeeeeeeceEEEEEcCCCcchHH--HHHhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADKIQ--GLTAPA-------DGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++|++..+++.. +..... ..+...+.+++|+|||++|+|||||+.. .++++++||++||+||+||
T Consensus 63 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKp 142 (454)
T cd07129 63 TTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKA 142 (454)
T ss_pred HHHHHHHHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEc
Confidence 4667888888776432 222110 1123457889999999999999999987 4589999999999999999
Q ss_pred CCCChhhHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-CCCcceee
Q 017060 71 AEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLE 145 (378)
Q Consensus 71 s~~~~~~~~~l~~~l----~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-~~~~v~~e 145 (378)
|+.+|.++.++.+++ .++|+|+|++|++++++.+.+..|++|++++.|+||||+.+|+.|.+.++++ +++|+++|
T Consensus 143 s~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lE 222 (454)
T cd07129 143 HPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAE 222 (454)
T ss_pred CCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEee
Confidence 999999999988876 4889999999999997767899999999999999999999999999988863 58999999
Q ss_pred cCCCCcEEEcCCc---CHHHHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCcccccc
Q 017060 146 LGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 221 (378)
Q Consensus 146 ~gG~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl 221 (378)
+|||||+||++|+ |++.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++| |+
T Consensus 223 lGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~ 292 (454)
T cd07129 223 LGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TM 292 (454)
T ss_pred cCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CC
Confidence 9999999999999 89999999999999999999999999999999 9999999999999988754 66
Q ss_pred CCHHHHHHHHHHHHHhhhC-CCeEeeCCcccCCCCeeeeceeeccCC---CcccccccccccceEEeeecCCHHHHHHHH
Q 017060 222 IDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297 (378)
Q Consensus 222 ~~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 297 (378)
+++...++..+.|++++++ |+++++||... .+|+|++|||+...+ ++|.++++|+||||++|++|+|.||+++++
T Consensus 293 ~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~ 371 (454)
T cd07129 293 LTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVA 371 (454)
T ss_pred cChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHH
Confidence 7777778888889999888 99999999754 368999999998655 689999999999999999999999999999
Q ss_pred HcCCCCceEEEecCC--HHHHHHHHHHc--ceeEEEEcCCCCCC---CCCCccC-CCCCCCCCc--chHHHHHhhhhc
Q 017060 298 NASQYGLAAGVFTHN--LDTANTLMRAL--RVGSVWINCFDVFD---AAIPFGG-YKQSGQGRE--KGSYSLSNYLQV 365 (378)
Q Consensus 298 n~~~~gl~~~v~s~d--~~~~~~~~~~l--~~g~v~vN~~~~~~---~~~pfgG-~~~sG~g~~--~g~~~l~~~~~~ 365 (378)
|++++||++||||+| .+.+++++++| ++|+|+||+++... +.+|||| +|.||+|++ +|.+++++||++
T Consensus 372 n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 372 EALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred hcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 999999999999999 79999999999 69999999875432 4789999 999999998 799999999986
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-70 Score=541.29 Aligned_cols=354 Identities=24% Similarity=0.284 Sum_probs=314.8
Q ss_pred HHHHHHHHHHHHhhhc--Ccc---CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQ--GLT---APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++..+.... ++. .+...+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus 62 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~ 141 (442)
T cd07084 62 DQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSI 141 (442)
T ss_pred hHHHHHHHHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchH
Confidence 4677899998886542 221 11112345789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCC-CCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 77 SALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 77 ~~~~l~~~l~~agl-P~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
++..+.++|.++|+ |+++++++++++. .+..|+.|++++.|+||||+++++.|++.++. +|+++|+|||||+||+
T Consensus 142 ~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~ 217 (442)
T cd07084 142 VMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLG 217 (442)
T ss_pred HHHHHHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEEC
Confidence 99999999999998 9999999999765 88999999999999999999999999987653 7999999999999999
Q ss_pred CCc-CHHHHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 156 EDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 156 ~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
+|+ |++.+++.+++++|.++||.|++++++|||++ ++++|+++|.++++++++| ++.+||++++ ++.++
T Consensus 218 ~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~ 288 (442)
T cd07084 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAM 288 (442)
T ss_pred CChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHH
Confidence 999 69999999999999999999999999999999 9999999999999999998 6789998765 45556
Q ss_pred HHHhhhC-CCeEeeCCcccC------CCCeeeeceeeccCCCcc---cccccccccceEEeeecCC--HHHHHHHHHcCC
Q 017060 234 IRSGVDG-GAKLETGGERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSILKYKD--LDEVIQRSNASQ 301 (378)
Q Consensus 234 i~~a~~~-ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~ 301 (378)
|+++.++ |+++++||.... ..|+|++|||+.+++++| .+++||+||||++|++|+| ++|+++++|+++
T Consensus 289 i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~ 368 (442)
T cd07084 289 IAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMH 368 (442)
T ss_pred HHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCC
Confidence 7777777 589999987522 248999999999999887 9999999999999999999 999999999999
Q ss_pred CCceEEEecCCHHHHHHHHHHc-ceeEEEEcCC-CC-CCCCCCccC-CCCCCCCCcc-hHHHHHhhhhceEE
Q 017060 302 YGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF-DV-FDAAIPFGG-YKQSGQGREK-GSYSLSNYLQVKAV 368 (378)
Q Consensus 302 ~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~~-~~-~~~~~pfgG-~~~sG~g~~~-g~~~l~~~~~~k~~ 368 (378)
+||++||||+|.+.++++++++ ++|+||||+. +. ..+..|||| .|.||+|++. |.+++++|++...+
T Consensus 369 ~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 369 GSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred CCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 9999999999999999999999 9999999976 33 345577766 8899999986 99999999987543
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-69 Score=530.23 Aligned_cols=319 Identities=22% Similarity=0.247 Sum_probs=287.6
Q ss_pred cceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHH----HHcCCCCCcEEEEeCCc
Q 017060 27 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYG 102 (378)
Q Consensus 27 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l----~~aglP~g~v~~v~~~~ 102 (378)
...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|++++.+
T Consensus 89 ~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~ 168 (429)
T cd07121 89 GLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPT 168 (429)
T ss_pred cceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCC
Confidence 34578899999999999999999999999999999999999999999999999999887 47899999999999876
Q ss_pred hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCC
Q 017060 103 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182 (378)
Q Consensus 103 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 182 (378)
.+.++.|++||++|.|.||||+++|+.|++. .+|+++|+|||||+||++|||++.|++.+++++|.++||.|+++
T Consensus 169 ~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~ 243 (429)
T cd07121 169 IETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAE 243 (429)
T ss_pred hHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCcc
Confidence 7789999999999999999999999999764 47999999999999999999999999999999999999999999
Q ss_pred CeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC--CCeEeeCCccc---CCCCee
Q 017060 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GAKLETGGERL---GAKGYY 257 (378)
Q Consensus 183 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--ga~~~~gg~~~---~~~g~~ 257 (378)
+|+|||++++|+|+++|+++ . .++++.++++++.++++++.+. |++++.||... ...|+|
T Consensus 244 ~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~ 308 (429)
T cd07121 244 KEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIE 308 (429)
T ss_pred ceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCC
Confidence 99999999999999999885 1 2478999999999999999864 68999988531 124778
Q ss_pred ee---ceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCc--eEEEecCCHHHHHHHHHHcceeEEEEcC
Q 017060 258 IK---PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRALRVGSVWINC 332 (378)
Q Consensus 258 ~~---Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 332 (378)
+. |||+.+++++|+++++|+||||++|++|+|+|||++++|+++||| +++|||+|.++++++++++++|+||||+
T Consensus 309 ~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~ 388 (429)
T cd07121 309 VPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNG 388 (429)
T ss_pred CCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcC
Confidence 77 499999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CCCCCCCCCccCCCCCCC--CCcchHHHHHhhhhceEEEEe
Q 017060 333 FDVFDAAIPFGGYKQSGQ--GREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 333 ~~~~~~~~pfgG~~~sG~--g~~~g~~~l~~~~~~k~~~~~ 371 (378)
... +.+||||+|.|++ |..-| +|+ +..|+++.+
T Consensus 389 ~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~~~ 423 (429)
T cd07121 389 PSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFTRR 423 (429)
T ss_pred CCc--CccccCCCccceEEecCCcC-cCc---cChhhhhee
Confidence 644 6789999999998 55444 555 555555544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-67 Score=523.72 Aligned_cols=356 Identities=19% Similarity=0.249 Sum_probs=297.4
Q ss_pred HHHHHHHHHHHHhhhcCccC---CCC-CCc---ceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCC
Q 017060 2 TTRLFRYYAGWADKIQGLTA---PAD-GPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 74 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~---~~~-~~~---~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~ 74 (378)
.++.++|++..+.++.++.. +.. .+. ..+..++|+||+++|+|||||+++.++++++||++||+||+|||+.+
T Consensus 153 ~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~t 232 (551)
T TIGR02288 153 GLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGA 232 (551)
T ss_pred HHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCccc
Confidence 35678899988877766543 221 111 22347899999999999999999999999999999999999999999
Q ss_pred hhhHH----HHHHHHHHcCCCCCcEEEEeCC-chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCC
Q 017060 75 PLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 149 (378)
Q Consensus 75 ~~~~~----~l~~~l~~aglP~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~ 149 (378)
|+++. ++.++|.++|+|+|++|++++. +.++++.|+.||+++.|.||||+.+|++|.+.++. +++++|+|||
T Consensus 233 pl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~---~~v~lElGGk 309 (551)
T TIGR02288 233 ILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ---AQVYTEKAGV 309 (551)
T ss_pred chhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---CcEEeecCCc
Confidence 99665 6779999999999999999985 67789999999999999999999999999987653 6899999999
Q ss_pred CcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEecc---------chHHHHHHHHHHHhhcccCCCCCCCccccc
Q 017060 150 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGDPFKGGIQQGP 220 (378)
Q Consensus 150 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~~~~~~~~~gp 220 (378)
||+||++|+|++.+++.+++++|.++||.|++++|+|||++ ++|+|+++|.++++++ +|+|.++.+++||
T Consensus 310 np~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gp 388 (551)
T TIGR02288 310 NTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGA 388 (551)
T ss_pred CeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccC
Confidence 99999999999999999999999999999999999999999 7999999999999999 9999999999999
Q ss_pred cCCHHHHHHHHHHHHHhhhCCCeEeeCCccc---CCCC-eeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHH
Q 017060 221 QIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296 (378)
Q Consensus 221 l~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 296 (378)
++++++++++ +++++.| +++.||... ..+| +|++|||+...+++|.+++||+||||++|++|+|.||||++
T Consensus 389 lis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~ 463 (551)
T TIGR02288 389 IQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVEL 463 (551)
T ss_pred cCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHH
Confidence 9999999995 5566678 566666432 1134 68999999544458999999999999999999999999999
Q ss_pred HHcC--CCC-ceEEEecCCHHHHHHHHHHc--ceeEEEEcCCCCC--CCCCCccCCCCCCCCCc-chHHHHHhhhhce
Q 017060 297 SNAS--QYG-LAAGVFTHNLDTANTLMRAL--RVGSVWINCFDVF--DAAIPFGGYKQSGQGRE-KGSYSLSNYLQVK 366 (378)
Q Consensus 297 ~n~~--~~g-l~~~v~s~d~~~~~~~~~~l--~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~~-~g~~~l~~~~~~k 366 (378)
+|++ ++| |+++|||+|.++++++.+++ ..|.++||..... +...+|++.+.||.+.- +..+.-..|...|
T Consensus 464 aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~~~~r 541 (551)
T TIGR02288 464 ARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDGAFVANR 541 (551)
T ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccchhhhhcc
Confidence 9998 556 99999999999999999999 2344444432211 23457788888887643 3445555565433
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-67 Score=522.28 Aligned_cols=322 Identities=22% Similarity=0.237 Sum_probs=287.8
Q ss_pred cceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHH----HcCCCCCcEEEEeCCc
Q 017060 27 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYG 102 (378)
Q Consensus 27 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~~~ 102 (378)
...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++++ ++|+|+|+++++++.+
T Consensus 121 ~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~ 200 (465)
T PRK15398 121 GLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPT 200 (465)
T ss_pred ceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCC
Confidence 456888999999999999999999999999999999999999999999999999999876 6899999999999866
Q ss_pred hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCC
Q 017060 103 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182 (378)
Q Consensus 103 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 182 (378)
.+.++.|++||++|.|.||||+++|+.|++ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 201 ~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~ 275 (465)
T PRK15398 201 IETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAE 275 (465)
T ss_pred HHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCC
Confidence 678899999999999999999999999987 247899999999999999999999999999999999999999999
Q ss_pred CeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcc---cCCCCeee-
Q 017060 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYI- 258 (378)
Q Consensus 183 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~---~~~~g~~~- 258 (378)
+|+|||++++|+|+++|+++ ..|+++.++++++.++++++.+++++++.|+.. ....|+++
T Consensus 276 ~rvlV~~si~d~f~~~l~~~---------------~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~ 340 (465)
T PRK15398 276 KEVIVVDSVADELMRLMEKN---------------GAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVP 340 (465)
T ss_pred ceEEEeHHHHHHHHHHHHHc---------------CCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCC
Confidence 99999999999999999885 137999999999999999654445566766542 11246655
Q ss_pred --eceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCc--eEEEecCCHHHHHHHHHHcceeEEEEcCCC
Q 017060 259 --KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRALRVGSVWINCFD 334 (378)
Q Consensus 259 --~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~ 334 (378)
.|||+.+++++|++++||+||||++|++|+|+|||++++|+++||| ++||||+|.++++++++++++|+|+||+..
T Consensus 341 ~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~ 420 (465)
T PRK15398 341 KDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPS 420 (465)
T ss_pred CCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCC
Confidence 4799999999999999999999999999999999999999999998 999999999999999999999999999764
Q ss_pred CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 335 VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 335 ~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+ +.+||||.|.|.+ ..+|+.| ...|..|+++.|.
T Consensus 421 -~-~~~p~gg~~~s~~-~~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 421 -Y-AGLGLGGEGFTTF-TIATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred -c-cccCcCCCCCcee-eecccCC-CCccchhhhhhhe
Confidence 3 6789999999985 2347777 7777777776654
|
|
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-67 Score=481.95 Aligned_cols=343 Identities=35% Similarity=0.619 Sum_probs=325.9
Q ss_pred cceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHH----HHHcCCCCCcEEEEeCCc
Q 017060 27 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYG 102 (378)
Q Consensus 27 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~----l~~aglP~g~v~~v~~~~ 102 (378)
...+++++|+||+..|.|||||+-..+.+++.||.+||.+|+|-|+.+.++.....++ |+..|-|++++|++.+ -
T Consensus 180 Kg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-l 258 (583)
T KOG2454|consen 180 KGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-L 258 (583)
T ss_pred ccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-C
Confidence 3458899999999999999999999999999999999999999999999988765555 5566999999999998 4
Q ss_pred hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCC
Q 017060 103 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182 (378)
Q Consensus 103 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 182 (378)
++.++.|.+|++++.+.|.||+.+++.|++.+++ .++|+++|+|||+++||.+|+|++..+..++++.|..+||.|...
T Consensus 259 pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGi 337 (583)
T KOG2454|consen 259 PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGI 337 (583)
T ss_pred cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccce
Confidence 6889999999999999999999999999999887 899999999999999999999999999999999999999999999
Q ss_pred CeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccC----CCCeee
Q 017060 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYI 258 (378)
Q Consensus 183 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~ 258 (378)
+|++||+++||.|+..|.++++.++.|.|.....++|.+++..+++.++.++++|+++||++..||.+.. ..|.|+
T Consensus 338 ER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF 417 (583)
T KOG2454|consen 338 ERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYF 417 (583)
T ss_pred eEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998542 468999
Q ss_pred eceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcceeEEEEcCCCCCC-
Q 017060 259 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD- 337 (378)
Q Consensus 259 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~- 337 (378)
+||++.+++++|.+++||.||||++++.+++.|++++++|++++||+++||+.|..+.++++++|++|.|.||+...+.
T Consensus 418 ~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~ 497 (583)
T KOG2454|consen 418 PPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYM 497 (583)
T ss_pred CCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhhe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987764
Q ss_pred CCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 338 AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 338 ~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
-++||||+|.||+|+..|.+||.-.++.|+|++.
T Consensus 498 cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 498 CQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred eccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 5689999999999999999999999999999765
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-67 Score=511.59 Aligned_cols=320 Identities=20% Similarity=0.247 Sum_probs=279.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.+++++..++. .++..+. ..+...+.+++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++
T Consensus 74 ~~~~~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~ 150 (406)
T cd07079 74 MAEGLRQVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSN 150 (406)
T ss_pred HHHHHHHHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHH
Confidence 35667777765542 2333322 2234568899999999999995 56 67889999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCCch-hhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 79 LYVSKLLH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~l~----~aglP~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
..+.+++. ++|+|+|++|++++.+. ..++.|.+||++|.|+||||+++|+.|++.+ ++|+++|+|||||+|
T Consensus 151 ~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~I 226 (406)
T cd07079 151 RALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVY 226 (406)
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEE
Confidence 99999887 88999999999998543 6788899999999999999999999998765 589999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++|.+++++
T Consensus 227 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~---------------------------- 277 (406)
T cd07079 227 VDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE---------------------------- 277 (406)
T ss_pred EeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------
Confidence 99999999999999999999999 9999999999999999999999997764
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
.|++++.|+.. ..|++|| ++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 278 ------~ga~~~~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~ 343 (406)
T cd07079 278 ------AGVELRGDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENY 343 (406)
T ss_pred ------CCCEEecCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCH
Confidence 24565433321 1377888 688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCC----CCcchHHHHHhhhhceEEEEe
Q 017060 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ----GREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~----g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++++++|.|+||+.+...+..||||.|+||+ |+++|.+++++|++.|++...
T Consensus 344 ~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 344 ETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred HHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence 9999999999999999999776666789999999998 899999999999999998753
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-65 Score=513.15 Aligned_cols=357 Identities=18% Similarity=0.224 Sum_probs=305.9
Q ss_pred HHHHHHHHHHHHhhhcCccC---CCC----CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCC
Q 017060 2 TTRLFRYYAGWADKIQGLTA---PAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 74 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~ 74 (378)
+++.++|++++++.+.++.. +.. ........++|+||+++|+|||||+++.+..+++||++||+||+|||+.+
T Consensus 153 a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a 232 (549)
T cd07127 153 GLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAA 232 (549)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCccc
Confidence 45677888888877655422 111 11112347899999999999999999999999999999999999999999
Q ss_pred hhhHH----HHHHHHHHcCCCCCcEEEEeCC-chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCC
Q 017060 75 PLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 149 (378)
Q Consensus 75 ~~~~~----~l~~~l~~aglP~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~ 149 (378)
|+++. .+.++|.++|+|+|+||++++. +.++++.|+.||+++.|.||||+.+|++|.+.++. +|+++|+|||
T Consensus 233 ~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~---~~v~~ElGGk 309 (549)
T cd07127 233 ILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ---AQVYTEKAGV 309 (549)
T ss_pred chhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc---CcEEEecCCc
Confidence 98864 4668999999999999999985 46789999999999999999999999999998764 6899999999
Q ss_pred CcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEecc---------chHHHHHHHHHHHhhcccCCCCCCCccccc
Q 017060 150 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGDPFKGGIQQGP 220 (378)
Q Consensus 150 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~~~~~~~~~gp 220 (378)
|++||++|+|++.+++.+++++|.++||.|++++|+|||++ ++|+|+++|.++++++ +|+|.+..+.+||
T Consensus 310 n~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gp 388 (549)
T cd07127 310 NTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGA 388 (549)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCC
Confidence 99999999999999999999999999999999999999999 8999999999999999 9999999999999
Q ss_pred cCCHHHHHHHHHHHHHhhhCCCeEeeCCcccC---CCC-eeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHH
Q 017060 221 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296 (378)
Q Consensus 221 l~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 296 (378)
++++++++++.+ +++.|. +++||.... .+| ++++|||+.+.+++|.+++||+||||++|++|+|.+|++++
T Consensus 389 li~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~ 463 (549)
T cd07127 389 IQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIEL 463 (549)
T ss_pred cCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHH
Confidence 999999999865 444565 777776432 134 56799999988899999999999999999999999999999
Q ss_pred HHcCC--C-CceEEEecCCHHHHHHHHHHc-ce-eEEEEcCCCCCCCC--CCccCCCCCCCCC-cchHHHHHhhhhceE
Q 017060 297 SNASQ--Y-GLAAGVFTHNLDTANTLMRAL-RV-GSVWINCFDVFDAA--IPFGGYKQSGQGR-EKGSYSLSNYLQVKA 367 (378)
Q Consensus 297 ~n~~~--~-gl~~~v~s~d~~~~~~~~~~l-~~-g~v~vN~~~~~~~~--~pfgG~~~sG~g~-~~g~~~l~~~~~~k~ 367 (378)
+|++. + ||+++|||+|.+.++++.+++ ++ |.++||+....... +||||.+.||.+. .+.......|...|-
T Consensus 464 an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~ 542 (549)
T cd07127 464 ARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRF 542 (549)
T ss_pred HHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcce
Confidence 99974 4 699999999999999999996 44 59999966544344 4599999999885 455566667775543
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-66 Score=508.21 Aligned_cols=326 Identities=18% Similarity=0.245 Sum_probs=283.5
Q ss_pred CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHH----HcCCCCCcEEEEeCC
Q 017060 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGY 101 (378)
Q Consensus 26 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~~ 101 (378)
+...++.|+|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|++++.
T Consensus 86 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~ 165 (439)
T cd07081 86 NGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP 165 (439)
T ss_pred CCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCC
Confidence 4456899999999999999999999999999999999999999999999999988888775 679999999999987
Q ss_pred chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccC
Q 017060 102 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181 (378)
Q Consensus 102 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a 181 (378)
+.+.++.|++||+++.|.||||+++ .+.+++ ++||+++|+|||+|+||++|||++.|++.+++++|.++||.|++
T Consensus 166 ~~~~g~~L~~~~~V~~V~FTGs~~v----~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a 240 (439)
T cd07081 166 SIELAQRLMKFPGIGLLLATGGPAV----VKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICAS 240 (439)
T ss_pred CHHHHHHHHcCCCCCEEEEECCHHH----HHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence 7778999999999999999999984 445555 68999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCc-c-cCCCCeeee
Q 017060 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-R-LGAKGYYIK 259 (378)
Q Consensus 182 ~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~-~-~~~~g~~~~ 259 (378)
.+|+|||+++||+|+++|.++ .||+++.++++++.++|+++.++|++++.|+. . ....|+|+.
T Consensus 241 ~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~ 305 (439)
T cd07081 241 EQSVIVVDSVYDEVMRLFEGQ---------------GAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVP 305 (439)
T ss_pred CCEEEEcHHHHHHHHHHHHHc---------------CCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccC
Confidence 999999999999999999885 28999999999999999999999998754432 1 112588999
Q ss_pred ce---eeccCC--CcccccccccccceEEeeecCCHHHHHHHHHcC----CCCceEEEecCC---HHHHHHHHHHcceeE
Q 017060 260 PT---VFTGVK--DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHN---LDTANTLMRALRVGS 327 (378)
Q Consensus 260 Pt---vl~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~s~d---~~~~~~~~~~l~~g~ 327 (378)
|| ++.+++ ++|.+++||+||||++|++|+|+|||++++|++ +|||+++|||+| .++++++++++++|.
T Consensus 306 pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~ 385 (439)
T cd07081 306 QETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSR 385 (439)
T ss_pred CCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceE
Confidence 98 888888 899999999999999999999999999999965 799999999999 999999999999999
Q ss_pred EEEcCCCCC-C--CCCCccCCCCCCCC-----CcchH--HHHHhhhhceEEEEe
Q 017060 328 VWINCFDVF-D--AAIPFGGYKQSGQG-----REKGS--YSLSNYLQVKAVVTA 371 (378)
Q Consensus 328 v~vN~~~~~-~--~~~pfgG~~~sG~g-----~~~g~--~~l~~~~~~k~~~~~ 371 (378)
|+||+.... . -.--|||++.+-.| ..+.. -+...|++.|++.+|
T Consensus 386 V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (439)
T cd07081 386 FVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVALR 439 (439)
T ss_pred EEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeecC
Confidence 999976522 1 22356666653332 22222 246678888877654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-66 Score=507.29 Aligned_cols=320 Identities=22% Similarity=0.275 Sum_probs=278.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.+++.. ++..+. ..+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++
T Consensus 80 ~~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~ 156 (417)
T PRK00197 80 IAEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSN 156 (417)
T ss_pred HHHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHH
Confidence 345677777766543 333322 22345789999999999999886 4 67889999999999999999999999999
Q ss_pred HHHHHHH----HHcCCCCCcEEEEeCCc-hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 79 LYVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~l----~~aglP~g~v~~v~~~~-~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
.++++++ .++|+|+|++|++++.+ ...+..|.+|+++|.|+||||+++|+.+++.+ ++|+++|+|||||+|
T Consensus 157 ~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~I 232 (417)
T PRK00197 157 RALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIY 232 (417)
T ss_pred HHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEE
Confidence 9988885 68899999999999644 45788898999999999999999999998753 589999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++|.+++++++++
T Consensus 233 V~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 287 (417)
T PRK00197 233 VDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE------------------------ 287 (417)
T ss_pred EeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999877532
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
++ ++... .+ |+ |||+ +++|.++++|+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 288 ----------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~ 349 (417)
T PRK00197 288 ----------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDY 349 (417)
T ss_pred ----------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCH
Confidence 11 11100 12 22 9998 46799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEe
Q 017060 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g----~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++++++|.|+||++....+..||||.|+||+| +++|.+|+++|++.|++.+.
T Consensus 350 ~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 350 AAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred HHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 99999999999999999997766677899999999999 99999999999999999875
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=522.24 Aligned_cols=316 Identities=19% Similarity=0.221 Sum_probs=280.0
Q ss_pred HHHHHHHHHHHHhhhcCccCC---CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.+. +..++..+ ...+...+..|+|+|||++|+||| |+... +++++||++||+||+|||+.+|+++
T Consensus 370 ~~~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~ 446 (718)
T PLN02418 370 LAASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSN 446 (718)
T ss_pred HHHHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHH
Confidence 567789999874 34444433 123444688999999999999999 99998 8999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCc----EEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEE
Q 017060 79 LYVSKLLHEAGLPPGV----LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~----v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV 154 (378)
..|++++.++ +|+|+ +|++++ +.+.+..|..||+++.|+||||++.++.+ ++. ++||+++|+|||||+||
T Consensus 447 ~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~~~---aa~-~~k~v~lELGGk~p~iV 520 (718)
T PLN02418 447 AILHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVSQI---KAS-TKIPVLGHADGICHVYV 520 (718)
T ss_pred HHHHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHHHH---HHh-cCCCEEEeCCCcceEEE
Confidence 9999999999 99996 999997 56789999999999999999999755444 444 68999999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.++.++|.| ||.|++.+|+|||+++||+ | .+.++|
T Consensus 521 ~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~--------------G-------------------~~~~~i 566 (718)
T PLN02418 521 DKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN--------------G-------------------GLNDLL 566 (718)
T ss_pred eCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--------------c-------------------cHHHHH
Confidence 99999999999999999999 9999999999999999997 1 358899
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++|+++ +||+... | ++. + ++|.+++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+
T Consensus 567 ~~a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~ 635 (718)
T PLN02418 567 VALRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSE 635 (718)
T ss_pred HHHHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHH
Confidence 9999999999 6876432 3 233 3 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCC--CCcc--hHHHHHhhhhceEEEEe
Q 017060 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREK--GSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~--g~~~--g~~~l~~~~~~k~~~~~ 371 (378)
++.++++++++|.||||+.+...+..||||+|+||+ |+++ |.+||++|++.|++.+.
T Consensus 636 ~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 636 VAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 999999999999999999876667789999999999 9774 99999999999999765
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-63 Score=496.14 Aligned_cols=326 Identities=18% Similarity=0.205 Sum_probs=291.5
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH----HHHHHHHcCCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~----l~~~l~~aglP~g~v~~v~~ 100 (378)
.+...+.+++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|.++.. +.++++++|+|+|++|++++
T Consensus 94 ~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g 173 (488)
T TIGR02518 94 KEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITV 173 (488)
T ss_pred CCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcC
Confidence 34557889999999999999999999999999999999999999999999999997 45556899999999999998
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCccc
Q 017060 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~ 180 (378)
.+.+.++.|++|+++|.|.||||+..++.+ .. ..+|+++|+|||+|+||++|||++.|++.++.++|+++||.|+
T Consensus 174 ~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~ 248 (488)
T TIGR02518 174 PTIEGTNELMKNKDTSLILATGGEAMVKAA----YS-SGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICA 248 (488)
T ss_pred CCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence 777889999999999999999999976543 22 5789999999999999999999999999999999999999999
Q ss_pred CCCeEEEeccchHHHHHHHHHH-------HhhcccCCC-CCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccC
Q 017060 181 AGSRTFVHESVYDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 252 (378)
Q Consensus 181 a~~~v~V~~~~~~~f~~~l~~~-------~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~ 252 (378)
+.+++|||++++|+|+++|.++ .+.+++|+| +++++++||+++.++++++.++++.++.+|+++++||..
T Consensus 249 a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~-- 326 (488)
T TIGR02518 249 SEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN-- 326 (488)
T ss_pred CCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--
Confidence 9999999999999999999998 899999996 678999999999999999999999999999999999852
Q ss_pred CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHc----CCCCceEEEecCCHHHHHHHHHHcceeEE
Q 017060 253 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLDTANTLMRALRVGSV 328 (378)
Q Consensus 253 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 328 (378)
.+++++++ ++|.||||++|++|+|+||||+++|+ .++||+++|||+|.+++++|++++++|+|
T Consensus 327 ------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V 393 (488)
T TIGR02518 327 ------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRM 393 (488)
T ss_pred ------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEE
Confidence 24567776 79999999999999999999999887 68999999999999999999999999999
Q ss_pred EEcCCCC------CCCCCC-----ccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 329 WINCFDV------FDAAIP-----FGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 329 ~vN~~~~------~~~~~p-----fgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+||++.. .....| ||+++-+++. .+-|++.+++.|++....+
T Consensus 394 ~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~~ 446 (488)
T TIGR02518 394 LVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGVR 446 (488)
T ss_pred EEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEeccc
Confidence 9996532 112223 6666666655 3889999999999988763
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-63 Score=488.76 Aligned_cols=326 Identities=20% Similarity=0.281 Sum_probs=279.5
Q ss_pred CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHH----HcCCCCCcEEEEeCC
Q 017060 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGY 101 (378)
Q Consensus 26 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~~ 101 (378)
+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++. ++|+|+|+++++++.
T Consensus 86 ~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~ 165 (436)
T cd07122 86 EKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEP 165 (436)
T ss_pred CCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCC
Confidence 4456889999999999999999999999999999999999999999999999999888764 789999999999987
Q ss_pred chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccC
Q 017060 102 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181 (378)
Q Consensus 102 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a 181 (378)
+.+.++.|++||++|.|.||||+++++ .+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++
T Consensus 166 ~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a 240 (436)
T cd07122 166 SIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICAS 240 (436)
T ss_pred ChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCC
Confidence 777889999999999999999999764 3343 67899999999999999999999999999999999999999999
Q ss_pred CCeEEEeccchHHHHHHHHHHHhhc-------ccCCC-CCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCC
Q 017060 182 GSRTFVHESVYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 253 (378)
Q Consensus 182 ~~~v~V~~~~~~~f~~~l~~~~~~~-------~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 253 (378)
++|+|||++++|+|+++|.++...+ ++|++ .+.++.+||+++..+++++.+.+..+...|++++.++
T Consensus 241 ~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~----- 315 (436)
T cd07122 241 EQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE----- 315 (436)
T ss_pred CCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe-----
Confidence 9999999999999999999988876 88888 4677889999999998888887777777777666544
Q ss_pred CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcC----CCCceEEEecCCHHHHHHHHHHcceeEEE
Q 017060 254 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHNLDTANTLMRALRVGSVW 329 (378)
Q Consensus 254 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 329 (378)
+.+++++|+++ +|.||||++|++|+|++||++++|++ +|||++||||+|.++++++++++++|.||
T Consensus 316 ---------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~ 385 (436)
T cd07122 316 ---------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRIL 385 (436)
T ss_pred ---------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEE
Confidence 45677888877 56899999999999999999999997 79999999999999999999999999999
Q ss_pred EcCCCCCC-CCCCcc--------CCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 330 INCFDVFD-AAIPFG--------GYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 330 vN~~~~~~-~~~pfg--------G~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
||+...+. ....+. |.+..|-+..++.-..+.|++.|+|.++
T Consensus 386 IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (436)
T cd07122 386 VNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAYR 436 (436)
T ss_pred EeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeeccC
Confidence 99865421 111111 1222333344445667788888887653
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-62 Score=519.52 Aligned_cols=331 Identities=19% Similarity=0.311 Sum_probs=298.1
Q ss_pred CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHH----HcCCCCCcEEEEeCC
Q 017060 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGY 101 (378)
Q Consensus 26 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~~ 101 (378)
+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|++++.
T Consensus 99 ~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~ 178 (862)
T PRK13805 99 EFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEP 178 (862)
T ss_pred CCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCC
Confidence 4456889999999999999999999999999999999999999999999999998888865 689999999999987
Q ss_pred chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccC
Q 017060 102 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181 (378)
Q Consensus 102 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a 181 (378)
+.+.++.|++|+++|.|.||||+.+++ .++. +++|+++|+|||||+||++|||++.|++.|++++|+|+||.|++
T Consensus 179 ~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a 253 (862)
T PRK13805 179 SVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICAS 253 (862)
T ss_pred CHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCC
Confidence 778899999999999999999999754 3343 68999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeE-eeCCccc---CCCCee
Q 017060 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL-ETGGERL---GAKGYY 257 (378)
Q Consensus 182 ~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~-~~gg~~~---~~~g~~ 257 (378)
++++|||++++|+|+++|.++ .+|+++.+++++++++|+++++.|++. +.|+... ...|++
T Consensus 254 ~~~v~V~~~i~d~f~~~l~~~---------------g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~ 318 (862)
T PRK13805 254 EQAVIVDDEIYDEVKEEFASH---------------GAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFK 318 (862)
T ss_pred CceEEEehhhHHHHHHHHHHh---------------CCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCC
Confidence 999999999999999999885 268999999999999999887655532 4455321 124788
Q ss_pred eecee------eccCCCcccccccccccceEEeeecCCHHHHHHHHHc----CCCCceEEEecCCHHHHHHHHHHcceeE
Q 017060 258 IKPTV------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLDTANTLMRALRVGS 327 (378)
Q Consensus 258 ~~Ptv------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 327 (378)
+.||+ +.++++++++++ |+||||++|++|+|++|||+++|+ .++||+++|||+|.+.++++++++++|+
T Consensus 319 ~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~ 397 (862)
T PRK13805 319 VPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACR 397 (862)
T ss_pred CCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccE
Confidence 99987 677889999877 899999999999999999999988 4799999999999999999999999999
Q ss_pred EEEcCCC----------CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 017060 328 VWINCFD----------VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 378 (378)
Q Consensus 328 v~vN~~~----------~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~~~~ 378 (378)
|+||... .+.+.+|||| |.||.|..+|..|+++|++.|.|..+...+.||
T Consensus 398 v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 398 ILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred EEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 9999875 3568899997 999999999999999999999999998888886
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-63 Score=456.69 Aligned_cols=367 Identities=28% Similarity=0.448 Sum_probs=339.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
.++++||++.++.++....+.. ..+..+...++|+ |.|.+|+|+||-....-...+||| +||+|+||||..+.+++.
T Consensus 162 Lidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssY 240 (561)
T KOG2455|consen 162 LIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSY 240 (561)
T ss_pred HHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHH
Confidence 4789999999999998876553 5567777888887 999999999999988888888999 899999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEE
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV 154 (378)
++.++|+|||+|+|++|+++++++..++.+..+|++.++.||||..+-+.+++..++ ...++++.|+||||..+|
T Consensus 241 ii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfV 320 (561)
T KOG2455|consen 241 IIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFV 320 (561)
T ss_pred HHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEe
Confidence 999999999999999999999999999999999999999999999999999988765 356789999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCC-CCCCccccccCCHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
+++||++.++...++++|.++||.|.+.+|+||++++++.+.++|.+.-+++++|+| .|.++.+||+++...++|++++
T Consensus 321 H~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~ 400 (561)
T KOG2455|consen 321 HASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKV 400 (561)
T ss_pred ccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999997 8889999999999999999999
Q ss_pred HHHhhhC-CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHH-HcCCCCceEEEe
Q 017060 234 IRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGVF 309 (378)
Q Consensus 234 i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~ 309 (378)
|+.|+.. -.++++||+.++..|+|+.|||+...+|..+++.||+||||++|+.|+| ++|+++++ |.++|+|+.+||
T Consensus 401 le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiF 480 (561)
T KOG2455|consen 401 LEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIF 480 (561)
T ss_pred HHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccc
Confidence 9999774 3688999999999999999999999999999999999999999999975 78999998 568999999999
Q ss_pred cCCHHHHHHHHHHcc--eeEEEEcCCCCCC--CCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 017060 310 THNLDTANTLMRALR--VGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 310 s~d~~~~~~~~~~l~--~g~v~vN~~~~~~--~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~ 369 (378)
+.|.+.+.+..+.|+ +|+.|||+..+.+ ...||||.+.||+. ..+|++-+.+|+.++++-
T Consensus 481 aqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ik 545 (561)
T KOG2455|consen 481 AQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIK 545 (561)
T ss_pred cccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhh
Confidence 999999999999996 9999999987653 67899999999987 578999999999987763
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-62 Score=456.01 Aligned_cols=351 Identities=43% Similarity=0.803 Sum_probs=328.3
Q ss_pred CHHHHHHHHHHHHhhhcCccCCCC--C--CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 1 MTTRLFRYYAGWADKIQGLTAPAD--G--PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
|.++.+||++.|.+++++..+|.. . .-.++++++|+|||++|.|||||+..+.|+.+.+|++-
T Consensus 525 msi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~------------- 591 (881)
T KOG2452|consen 525 MSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ------------- 591 (881)
T ss_pred ceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH-------------
Confidence 357899999999999999987732 2 23468999999999999999999999999999988532
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
..++.+ -.|++++++|++.-+++.|..||+++.|-||||++.|+.|++.++..+.|++.+|+||++|+|++.
T Consensus 592 ----~~k~~e----~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifa 663 (881)
T KOG2452|consen 592 ----VLKFAE----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFA 663 (881)
T ss_pred ----Hhhhhh----hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEe
Confidence 112222 247899999999999999999999999999999999999999999989999999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||+++|+.....+.|++-|..|.+..|+||.+++.|+|+.++.+.++++++|+|+|.+++-||--..+++.++.+|.+.
T Consensus 664 d~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~ 743 (881)
T KOG2452|consen 664 DCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQH 743 (881)
T ss_pred cCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++..|+++.+||++.+.+|.|++|||+.+++.+|.+..||.||||+.|.+|+ |+|+.++.+|++++||++.|||+|..
T Consensus 744 ~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~ 823 (881)
T KOG2452|consen 744 GVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDIN 823 (881)
T ss_pred HhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccc
Confidence 9999999999999998899999999999999999999999999999999997 58899999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
.+.++++.|.+|+|+||.+...+...||||+|+||+|...|.+.|.+|.+.|++++.+
T Consensus 824 k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 824 KALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred hhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEeeC
Confidence 9999999999999999999888888999999999999999999999999999998753
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-62 Score=476.34 Aligned_cols=316 Identities=19% Similarity=0.195 Sum_probs=282.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.+++++..+++..++..+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++.++
T Consensus 69 ~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l 145 (397)
T cd07077 69 NIDTERGITASVGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRAL 145 (397)
T ss_pred HHHHHHHHHHhcCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHH
Confidence 3556777776655555443332 3357899999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHc---CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 82 SKLLHEA---GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 82 ~~~l~~a---glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.+++.++ |+|+++++++++.+.+.+..|++|+++|.|+||||+++++.+.+.+. .+|++.|+||++++||++|+
T Consensus 146 ~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~da 222 (397)
T cd07077 146 ALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETA 222 (397)
T ss_pred HHHHHHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCC
Confidence 9999987 99999999999877788999999999999999999999999987652 47999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|++ ||.|++++++|||++++|+|+++|.+++..
T Consensus 223 d~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------- 268 (397)
T cd07077 223 DEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------- 268 (397)
T ss_pred CHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh---------------------------------
Confidence 9999999999999999 999999999999999999999999997753
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHH----HHHHHHHcCCCCceEEEecCCHH
Q 017060 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD----EVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
+|+++..|++ ++|+.|| ++|.+.++|+||||+++++|+|++ +|++++|+++|||+++|||+|.+
T Consensus 269 -~G~~~~~g~~-----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~ 336 (397)
T cd07077 269 -EGLKVPQETK-----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKIN 336 (397)
T ss_pred -cCcCcCCCce-----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 4677776663 4677776 678888999999999999999996 66678899999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCC--CCCCccCCC--CCCCCCcch-HHHHHhhhhceEEE
Q 017060 315 TANTLMRALRVGSVWINCFDVFD--AAIPFGGYK--QSGQGREKG-SYSLSNYLQVKAVV 369 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~--~~~pfgG~~--~sG~g~~~g-~~~l~~~~~~k~~~ 369 (378)
+++++++++++|.|+||+..... ..+||||.| .||+|+++| .+++++|++.|++.
T Consensus 337 ~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 337 KVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred HHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999999999999999876543 678999999 899999999 99999999999885
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-60 Score=463.37 Aligned_cols=307 Identities=55% Similarity=0.874 Sum_probs=287.4
Q ss_pred HHHHHHHHHHHHhhhcCccC-CCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.+... ....+...+.+++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..
T Consensus 58 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~ 137 (367)
T cd06534 58 AIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALA 137 (367)
T ss_pred HHHHHHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 46778899988887766332 23456678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+.++|.++|+|+++++++++++++....|..|+++|.|.||||+++++.|.+.+++ +++|+++|++|+|++||++|+|+
T Consensus 138 l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~ 216 (367)
T cd06534 138 LAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADL 216 (367)
T ss_pred HHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCH
Confidence 99999999999999999999776788999999999999999999999999999887 68899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.++||.|+++++||||++++|+|+++|.
T Consensus 217 ~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~---------------------------------------- 256 (367)
T cd06534 217 DAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV---------------------------------------- 256 (367)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc----------------------------------------
Confidence 9999999999999999999999999999999999999997
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|++.+++++++++++|+|||+++|++|++.+|+++++|++++||++||||+|.+.+++++
T Consensus 257 --------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 316 (367)
T cd06534 257 --------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316 (367)
T ss_pred --------------------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHH
Confidence 567777888999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 321 RALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+++++|+|+||+.+.. .+..||||.|+||+|+++|.+++++|++.|++.
T Consensus 317 ~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred HhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 9999999999998776 788999999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-62 Score=461.32 Aligned_cols=354 Identities=34% Similarity=0.524 Sum_probs=320.5
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
++||||||+.+++.-.+ ....+|+|+++||+|||||+..+..+++.||++||+|+-||.+++|+.+..-
T Consensus 214 AVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~a 282 (769)
T COG4230 214 AVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQA 282 (769)
T ss_pred HHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHH
Confidence 68999999999876322 1456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC--CcceeecCCCCcEEEcCCcC
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~--~~v~~e~gG~~~~iV~~dad 159 (378)
.+++.++|+|++++|+++|++..++..|+.++++++|.||||+++++.|.+..+++.. .|++.|+||.|.|||+.+|-
T Consensus 283 V~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL 362 (769)
T COG4230 283 VRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSAL 362 (769)
T ss_pred HHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhh
Confidence 9999999999999999999999999999999999999999999999999998887544 47899999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
-|.++..++.|+|..+||.|.+...+++++++.|..+++|+-.+.++++|+|..-.+++||+|+.+....++++|+..+.
T Consensus 363 ~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~ 442 (769)
T COG4230 363 AEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRS 442 (769)
T ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecC--CHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 240 GGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 240 ~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
.|-.+..-....+ ..|.|+.||+++-..-+ -++.|+||||+.|++|+ ++++.|+-+|.+.|||+..|||+-++++
T Consensus 443 ~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~--eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti 520 (769)
T COG4230 443 KGRLVHQAAAPNSLQKGTFVAPTLIELENLD--ELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETI 520 (769)
T ss_pred cccchhhccCCCccCCceeeCceeEEcCCHH--HHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHH
Confidence 7744432222212 47999999999754433 24899999999999997 7899999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEE
Q 017060 317 NTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 368 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~ 368 (378)
.++.+++++|++|||.-... ...+||||.+-||+| ..+|+..|..|...+..
T Consensus 521 ~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 521 AHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred HHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 99999999999999986543 466899999999999 57899999999876543
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-61 Score=496.59 Aligned_cols=317 Identities=17% Similarity=0.195 Sum_probs=270.4
Q ss_pred HHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 3 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
++.++++++. .+..++..+. ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 4456676662 2332333221 12334578899999999999999 9998 689999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC----cEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 80 YVSKLLHEAGLPPG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 80 ~l~~~l~~aglP~g----~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
.+++++.++ +|+| +++++++ .++.+..|..|+++|.|+||||+.+|+.|++.++ +|+.+|+|||||+||+
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~ 513 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVD 513 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEEC
Confidence 999999999 9987 6899985 5677888999999999999999999999988753 7999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.++.+.|.+ ||.|++++|+|||++++|+ | .+.++++
T Consensus 514 ~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~ 559 (715)
T TIGR01092 514 KSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLID 559 (715)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHH
Confidence 9999999987777776655 9999999999999999985 0 2556777
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
++.++|+++. ||.... .|+. ..+++|.+++||+||||++|++|+|++|||+++|++++||++||||+|.+.
T Consensus 560 ~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~ 630 (715)
T TIGR01092 560 MLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENV 630 (715)
T ss_pred HHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHH
Confidence 7778899985 775422 2332 125689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCC----cchHHHHHhhhhceEEEEe
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR----EKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~----~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++++|.|+||+.....+..||||.|+||+|+ ++|.+++++|++.|++.+.
T Consensus 631 a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 631 AEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG 690 (715)
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence 9999999999999999876666778999999999995 4899999999999999776
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-60 Score=461.18 Aligned_cols=319 Identities=19% Similarity=0.189 Sum_probs=270.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|+++.++.. ++..+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++
T Consensus 68 ~~~~~~~~a~~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~ 144 (398)
T TIGR00407 68 IADGVKDVIELADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSN 144 (398)
T ss_pred HHHHHHHHhcCCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHH
Confidence 567889999888764 444432 23556789999999999999997 7 66888999999999999999999999999
Q ss_pred HHHHHH----HHHcCCCCCcEEEEeCCc-hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 79 LYVSKL----LHEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~----l~~aglP~g~v~~v~~~~-~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
..++++ |.++|+|+|++|++++.+ .+.+..|..||++|.|+||||+.+++.+++. ..+|+++|+|||||+|
T Consensus 145 ~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~i 220 (398)
T TIGR00407 145 KALVEVIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIY 220 (398)
T ss_pred HHHHHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEE
Confidence 999999 559999999999999744 4578889999999999999999999988764 3579999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.+ ||.|++++|+|||++++|+|+++|.+++.++.+. ++. .+.++++
T Consensus 221 V~~dADl~~Aa~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~--------~~~------~~~i~~~ 285 (398)
T TIGR00407 221 LDESADLIKAIKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT--------IHA------DAYALKL 285 (398)
T ss_pred EeCCCCHHHHHHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE--------Eec------CHHHHHH
Confidence 999999999999999999965 9999999999999999999999999999876431 211 1334434
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
+.. | | ||++ +.++.+++||+||||++|++|+|++||++++|++++||++||||+|.
T Consensus 286 v~~----g------~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~ 341 (398)
T TIGR00407 286 LEL----G------P-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENK 341 (398)
T ss_pred Hhc----c------C-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCH
Confidence 331 1 1 2444 23368899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCC----CCCCCCcchHHHHHhhhhce
Q 017060 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYK----QSGQGREKGSYSLSNYLQVK 366 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~----~sG~g~~~g~~~l~~~~~~k 366 (378)
++++++++++++|.|+||+.+.+.+..|||=-. .++..+.+|+.+++.|+..|
T Consensus 342 ~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 342 ANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 999999999999999999988777778997222 24567889999999999875
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-58 Score=416.06 Aligned_cols=370 Identities=30% Similarity=0.516 Sum_probs=340.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
.+|+++|...+.+.+.+...|.. .+.-....|-|+|+|.+|+.+|||....-|.-+.|+.+||+|+|||.+.+|+++..
T Consensus 119 yvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiA 198 (507)
T KOG2453|consen 119 YVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIA 198 (507)
T ss_pred HHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHH
Confidence 36889999999999999988755 45555778999999999999999999888999999999999999999999988764
Q ss_pred ----HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 81 ----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 81 ----l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+.+.|.+-.+|.+..+..+| +.+.++++..+.+++.+.||||++.++.+.....+ +..+..+|+||+|+.||.+
T Consensus 199 vtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa-rfgk~llelggnnaiiv~e 276 (507)
T KOG2453|consen 199 VTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA-RFGKLLLELGGNNAIIVNE 276 (507)
T ss_pred HHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH-HhhhHHHhhcCCceEEEec
Confidence 55567777899999999988 67899999999999999999999999999888776 4567899999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||+..++...++++...+||.|+..+|+++|+++||+.+++|++..+++++|.|+|+.+-+||+-+.+...+.+..++.
T Consensus 277 dadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~vee 356 (507)
T KOG2453|consen 277 DADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEE 356 (507)
T ss_pred cccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
+++.|.++..||+..+.+|+|++|||++ +.+|.+++.+|.|.||++|..|++++||+++-|+.+.||++|+||+|...+
T Consensus 357 ak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~ni 435 (507)
T KOG2453|consen 357 AKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNI 435 (507)
T ss_pred HHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHH
Confidence 9999999999999888899999999998 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc--ceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 017060 317 NTLMRAL--RVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 317 ~~~~~~l--~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
-+...-. ++|.|.||-+... .-.-.|||-|.+|-|++.|.+++++|+++.+-++++.+
T Consensus 436 frw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctinysk 496 (507)
T KOG2453|consen 436 FRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINYSK 496 (507)
T ss_pred HhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeeccc
Confidence 8887654 7999999986443 23458999999999999999999999999988888754
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=268.70 Aligned_cols=271 Identities=18% Similarity=0.197 Sum_probs=207.9
Q ss_pred CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCC----CcEEEEe--
Q 017060 26 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIVS-- 99 (378)
Q Consensus 26 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~----g~v~~v~-- 99 (378)
+...+++++|+|++++|+|||+|+ ..+++++.||++||++|+|||+.+|.++..|.++|.++ +|+ +.++++.
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~ 180 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP 180 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence 345688999999999999999999 79999999999999999999999999999999999999 787 8888884
Q ss_pred CCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCc-EEEcCCc----CHHHHHHHHHHHHhhc
Q 017060 100 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIVCEDA----DVDKAAELAHYALFFN 174 (378)
Q Consensus 100 ~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~-~iV~~da----dl~~aa~~i~~~~~~~ 174 (378)
|.++++++.+.+++ |.|+||||+++++.|++.++. + +..+|+|||++ +|+++++ |++.+++.++++.+.+
T Consensus 181 g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~ 255 (422)
T cd07080 181 GGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRY 255 (422)
T ss_pred CCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHH
Confidence 55556888888886 999999999999999998774 3 56999999955 5555568 9999999999999999
Q ss_pred CCCcccCCCeEEEeccc---hHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017060 175 QGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 175 ~Gq~C~a~~~v~V~~~~---~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
+||.|.|++++||+++. +++|.++|.++++++.-..|.. +. +.+...++...-..+...+......
T Consensus 256 ~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~~---- 324 (422)
T cd07080 256 DQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGVS---- 324 (422)
T ss_pred hhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCCC----
Confidence 99999999999999999 8999999999998876443321 11 3333333333222222222211110
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcc
Q 017060 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 324 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 324 (378)
.+.+. +|+...... + .....+=.+.|+.+++++|++..++. +--|++++..+.+. .++++.+.
T Consensus 325 ~~~~~----~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 325 RDLGW----TVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALA 387 (422)
T ss_pred CCCCe----EEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHH
Confidence 11111 233322222 1 11344558899999999999999986 55699999988777 77888875
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=238.48 Aligned_cols=319 Identities=19% Similarity=0.241 Sum_probs=253.4
Q ss_pred HHHHHHHHHHHhhhcCccC--CCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 3 TRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
++-++..+.+.+++..... ..+.|.+.+-.|.|+||+++|. ...| +..+...+-||++||+||||.+..+..++..
T Consensus 80 a~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIY-EsRP-nVtvdaaaLclKsGNAvILRGGsea~~Sn~a 157 (417)
T COG0014 80 ADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIY-ESRP-NVTVDAAALCLKSGNAVILRGGSEAIHSNAA 157 (417)
T ss_pred HHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEE-ecCC-ccHHHHHHHHHhcCCEEEEeCcHHHhhhHHH
Confidence 4445555665555543221 1345778899999999999997 4566 4567778899999999999999999999888
Q ss_pred HHHH----HHHcCCCCCcEEEEeCCchh-hHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 81 VSKL----LHEAGLPPGVLNIVSGYGPT-AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 81 l~~~----l~~aglP~g~v~~v~~~~~~-~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+.++ |.++|+|.+.||+++..+.+ +.+.|..+.-+|.|.-.||....+.+.+. ...||+-.+-|++.++|+
T Consensus 158 i~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~----a~vPVi~~~~G~CHiyvd 233 (417)
T COG0014 158 IVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVEN----ATVPVIEHGVGNCHIYVD 233 (417)
T ss_pred HHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhC----CcCCEEecCcceEEEEec
Confidence 7776 55679999999999975444 44455555669999999999998888765 346999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
.+||+|.|.+.++.++....+ .|++.+.++||+.+.++|+..|.+.+..
T Consensus 234 ~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~------------------------------ 282 (417)
T COG0014 234 ESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE------------------------------ 282 (417)
T ss_pred ccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh------------------------------
Confidence 999999999999999998887 8999999999999999999999887763
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeecc--CCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTG--VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~--~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
.|.++....+... ++.. .+....=+..|...+++.|..+++.+|||+.+|....+++-+|.|+|.
T Consensus 283 ----~gvelr~d~~~~~---------~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~ 349 (417)
T COG0014 283 ----AGVELRGDAEALA---------LLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDY 349 (417)
T ss_pred ----cCeEEEcCHHHHH---------hccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCH
Confidence 2334433222100 1111 122222246788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCC----CCCCCCcchHHHHHhhhhceEEEEe
Q 017060 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYK----QSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~----~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+.+++|.+.+++..||||..+.|....-||=-. ++...+.+|+.||+++|.+|.+...
T Consensus 350 ~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 350 ANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred HHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 999999999999999999998887666665322 2446688999999999999998654
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-20 Score=166.05 Aligned_cols=296 Identities=20% Similarity=0.227 Sum_probs=230.9
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHc----CCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~a----glP~g~v~~v~~ 100 (378)
++..-+..-.|+||.++|-- .-| -.+..-.+-|++.||.+++|....+..+...+.++.+++ |.|.+.++++..
T Consensus 101 dgL~L~qvt~PiGvLLVIFE-SRP-d~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s 178 (433)
T KOG4165|consen 101 DGLELEQVTVPIGVLLVIFE-SRP-DCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS 178 (433)
T ss_pred CCceEEEeeccceEEEEEec-cCc-hHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec
Confidence 45556777899999999842 233 334445567999999999999999999988888887766 678999999987
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCccc
Q 017060 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~ 180 (378)
.+++.+.|.-+.-||.|.-.||.+..+.|... ...||...-.|.+.+.|++|||++.|.+-+..+++.+. -.|+
T Consensus 179 -REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYP-AaCN 252 (433)
T KOG4165|consen 179 -REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYP-AACN 252 (433)
T ss_pred -HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEeccccCHHHHHHHHhcccCCCc-hhhh
Confidence 56788888888889999999999998888654 34699999999999999999999999887666666554 4899
Q ss_pred CCCeEEEeccc-hHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeee
Q 017060 181 AGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 259 (378)
Q Consensus 181 a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~ 259 (378)
+.+.+++|++. ...|++.|...+. .+|.++.+|.+...
T Consensus 253 AmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~gVtl~agpkl~~------- 291 (433)
T KOG4165|consen 253 AMETLLIHKDLEQSPFFDDLINMLK----------------------------------EEGVTLHAGPKLAA------- 291 (433)
T ss_pred hHHHHhccHhhhhcchHHHHHHHHH----------------------------------hcCeEEecChhHHh-------
Confidence 99999999983 4456665555433 34555555443211
Q ss_pred ceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcceeEEEEcCCCCCCCC
Q 017060 260 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA 339 (378)
Q Consensus 260 Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~ 339 (378)
++.-.++...-++.|.-.-.+++-.+++.++||+.+|....+++-+|.|+|...+++|.+.+++..|+.|....|...
T Consensus 292 --~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDG 369 (433)
T KOG4165|consen 292 --LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADG 369 (433)
T ss_pred --hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeeccccccccc
Confidence 111113444556777777788999999999999999999999999999999999999999999999999998888877
Q ss_pred CCccCCCCCCCC----CcchHHHHHhhhhceEEEEe
Q 017060 340 IPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 340 ~pfgG~~~sG~g----~~~g~~~l~~~~~~k~~~~~ 371 (378)
+-||=--+-|+. +.+|+-|++-.+.+|.+...
T Consensus 370 fRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 370 FRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred ccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 778643344432 46788888888888876443
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-16 Score=154.25 Aligned_cols=302 Identities=18% Similarity=0.219 Sum_probs=204.5
Q ss_pred eeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCC----CcEEEE--eCCc
Q 017060 29 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGYG 102 (378)
Q Consensus 29 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~----g~v~~v--~~~~ 102 (378)
.+.++.|.|++++|.|.|.|.. .++.++.+|.+||..|+|.|...+.++..|.+.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 6788999999999999999975 6667888999999999999999999999999999886 553 456666 4545
Q ss_pred hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCC
Q 017060 103 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182 (378)
Q Consensus 103 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 182 (378)
.++.+.+.+ ..|.++.+||.++.+.+.+.... .++.+....-.+..++..+++++.+++.+..-.+...+|.|.||
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~--~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLPP--GARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCC--CCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 667777764 48999999999999999884432 34555555667777888888999999999999999999999999
Q ss_pred CeEEEec---cchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH-----HHHhhhCCCeEeeCCcccCCC
Q 017060 183 SRTFVHE---SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY-----IRSGVDGGAKLETGGERLGAK 254 (378)
Q Consensus 183 ~~v~V~~---~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~-----i~~a~~~ga~~~~gg~~~~~~ 254 (378)
+.+||.. .-.++|.++|.+.+.+..---|... .+.+....+... +..+...+.++..+..
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~----- 302 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDD----- 302 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCC-----
Confidence 9999993 3467888888777765432222111 111121222222 2233333434442221
Q ss_pred CeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEEcCC
Q 017060 255 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF 333 (378)
Q Consensus 255 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~~ 333 (378)
+ .-||+.... +.. .....+=.+.|+++++.+|++..++....--|++++... ....++++.+ ..|.-.|
T Consensus 303 ~---~~~V~~~~~--~~~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri--- 372 (399)
T PF05893_consen 303 N---SWTVIVSPE--PPL-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI--- 372 (399)
T ss_pred C---CEEEEECCC--ccc-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee---
Confidence 1 123443222 111 223445589999999999999999988551278887654 4555666644 4443333
Q ss_pred CCCCCCCCccCCCCCCC-CCcchHHHHHhhhh
Q 017060 334 DVFDAAIPFGGYKQSGQ-GREKGSYSLSNYLQ 364 (378)
Q Consensus 334 ~~~~~~~pfgG~~~sG~-g~~~g~~~l~~~~~ 364 (378)
.|.|-...--. +..-|.+.|.+|++
T Consensus 373 ------v~~G~m~~~~~g~~hDG~~~L~~lvR 398 (399)
T PF05893_consen 373 ------VPLGQMLDFDPGWPHDGMYPLRRLVR 398 (399)
T ss_pred ------CCCCcCCCCCCCCCcCCHhHHHHHhC
Confidence 22322221111 24557888888876
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-13 Score=118.34 Aligned_cols=172 Identities=19% Similarity=0.237 Sum_probs=134.2
Q ss_pred CcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHH
Q 017060 150 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 229 (378)
Q Consensus 150 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 229 (378)
.-+||++|+|++.|+..++.++-.--+ ..+.-.|+|||++.|+|+++++.+++.+. + .+.++..+.|
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~-----~va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------P-----QVANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------h-----hhccCcHHHH
Confidence 457999999999999999999854443 56777899999999999999999887543 2 2455667777
Q ss_pred HHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCC-ceEEE
Q 017060 230 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG-LAAGV 308 (378)
Q Consensus 230 ~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g-l~~~v 308 (378)
..+.|+. -+++++.+.... .-..-.|.++.+.+.+.. . +-..+|+++..|++..||+++.++..-. -++||
T Consensus 73 sl~~i~~---l~~~~I~~~~~~--~~~~aSPilV~d~~h~~f--g-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsi 144 (215)
T PF07368_consen 73 SLKKIKC---LNAKTIVADFEN--VPPPASPILVCDFTHSYF--G-DGPTGVITLHTFRTPKEAIELCAKETLPFDSVSI 144 (215)
T ss_pred HHHHHHh---cCCeEEEecccC--CCCCCCCEEEcCCCHHHc--C-CCCCeEEEEEccCCHHHHHHHHhcCCCCcceEEE
Confidence 7777774 578898874321 123448999998776543 2 2455799999999999999999986333 39999
Q ss_pred ecCCHHHHHHHHHHcceeEEEEcCCCCC-CCCCCc
Q 017060 309 FTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPF 342 (378)
Q Consensus 309 ~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pf 342 (378)
|++..+.+.+++.+|++..++|||.... .|-.++
T Consensus 145 W~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~ 179 (215)
T PF07368_consen 145 WNEKLASAYELAARLPCDTFYINCFNVDLSPIMPF 179 (215)
T ss_pred eCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhh
Confidence 9999999999999999999999997643 344443
|
The function of this family is unknown. |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-14 Score=114.15 Aligned_cols=144 Identities=26% Similarity=0.295 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc----CCCCeeeeceeeccCC
Q 017060 192 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVK 267 (378)
Q Consensus 192 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~ 267 (378)
.....+.|.+..+.+++-+...+.++. .+..+|+.++|+.- +...|... -..|+|..||++. ++
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~------~~~~~r~~yl~~ya~~~f~~~tiLs-vt 75 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSE------DPLDGRFIYLPGYAEGNFVGPTILS-VT 75 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCc------CccCCceEEeeccccCCcccceEEE-ec
Confidence 466778888888889988877888886 67778888888862 33333211 1468999999998 99
Q ss_pred CcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcceeEEEEcCC-CCCCCCCCccCCC
Q 017060 268 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYK 346 (378)
Q Consensus 268 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~-~~~~~~~pfgG~~ 346 (378)
|+|.++.||+||||+....-++++|+|.++|+++||-...+||.+.+.++++....++|.+-+|.. |.-.+...|.|.+
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999985 4445666676654
Q ss_pred C
Q 017060 347 Q 347 (378)
Q Consensus 347 ~ 347 (378)
.
T Consensus 156 ~ 156 (157)
T KOG2449|consen 156 K 156 (157)
T ss_pred C
Confidence 3
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.7e-08 Score=105.89 Aligned_cols=111 Identities=16% Similarity=0.073 Sum_probs=87.4
Q ss_pred ccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEE
Q 017060 19 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 98 (378)
Q Consensus 19 ~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v 98 (378)
..+|+++|+++.....|+|+++|++||| ..++.+++.||++||+||+||++.++. .+. .+|..+.+.+
T Consensus 1062 ~~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~--~Lp~~~~~~~ 1129 (1208)
T PRK11905 1062 QELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------ALA--DLPGLVAARI 1129 (1208)
T ss_pred ccCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HHH--hCcccccccc
Confidence 3478899999999999999999999999 447889999999999999999987551 222 2566555544
Q ss_pred eCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC--Ccceeec
Q 017060 99 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLEL 146 (378)
Q Consensus 99 ~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~--~~v~~e~ 146 (378)
.++..+..+++++.|.|+|++++.+.+.+..+++.+ .|++.|.
T Consensus 1130 -----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 -----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred -----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 233467777889999999999999999999887643 3444444
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.033 Score=53.82 Aligned_cols=259 Identities=19% Similarity=0.206 Sum_probs=146.9
Q ss_pred CCCcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCeEE--EeCCCC-ChhhHHHHHHHHHHcCCCCCcEEE
Q 017060 24 DGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIV--LKTAEQ-TPLSALYVSKLLHEAGLPPGVLNI 97 (378)
Q Consensus 24 ~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~vv--lkps~~-~~~~~~~l~~~l~~aglP~g~v~~ 97 (378)
..|...-.++.|+--|+++.|. -|| .+.++..+||-.+|+.=| .-|+.. .......|+ ..+.+|..+ +
T Consensus 77 ~~Gv~~g~~~~Pi~rvGlYVPGG~a~~p-StvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----I 150 (393)
T TIGR00069 77 EPGVILGQRVRPLERVGLYVPGGRAPYP-STVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE----V 150 (393)
T ss_pred CCCeEEEEEEEEeheEEEEeCCCCCcch-HHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe----e
Confidence 3456667889999999999996 355 345666789999998544 455432 122333333 456666543 2
Q ss_pred EeCCchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec-CCCC--cEEEcCCcCHHHHHHHHHHH
Q 017060 98 VSGYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKS--PFIVCEDADVDKAAELAHYA 170 (378)
Q Consensus 98 v~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~-gG~~--~~iV~~dadl~~aa~~i~~~ 170 (378)
..-.|...-.+|. +-|++|.|+=.|..-+.. ++.... . .|-..+ .|-+ .+|-+++||.+..+..++.-
T Consensus 151 y~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~--AK~~v~-g--~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQ 225 (393)
T TIGR00069 151 YKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTA--AKKLVF-G--DVGIDMPAGPSEVLVIADETANPEFVAADLLSQ 225 (393)
T ss_pred hhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhc-C--ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 2211333222332 247889888777765533 222111 1 121111 2322 34445568999888777755
Q ss_pred HhhcCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCC
Q 017060 171 LFFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 248 (378)
Q Consensus 171 ~~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg 248 (378)
+=+... .+.+++-.+ +.++..+.+.+++..+. +. +.+++++++
T Consensus 226 AEHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r~----~i~~~al~~-------- 270 (393)
T TIGR00069 226 AEHDPD-----AQAILVTTSEELAEAVQEEIERQLATLP------------------RR----EIARKSLED-------- 270 (393)
T ss_pred hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------hH----HHHHHHHHh--------
Confidence 533332 334555443 33444444444443321 00 111222111
Q ss_pred cccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeE
Q 017060 249 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGS 327 (378)
Q Consensus 249 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~ 327 (378)
+| .++.++|++|+++++|..-.- ...|+++|. +++..++ ++|.
T Consensus 271 -----------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p---~~~l~~I~nAGa 314 (393)
T TIGR00069 271 -----------------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNP---EELLPKIRNAGS 314 (393)
T ss_pred -----------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhcCccce
Confidence 22 345679999999999985433 345888886 4677777 5999
Q ss_pred EEEcCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 328 VWINCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 328 v~vN~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
|++..+... +..+|= +|..+..+..+..+|+++-++.
T Consensus 315 iFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 315 IFLGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred eccCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 999876431 223343 5667888888899998876654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0082 Score=58.00 Aligned_cols=280 Identities=20% Similarity=0.241 Sum_probs=154.5
Q ss_pred HHHHHHHHHHhhhcCccCC------CCCCcceeeeeeeceEEEEEcC---CCcchHHHHHhhhchhccCCeEE--EeCCC
Q 017060 4 RLFRYYAGWADKIQGLTAP------ADGPYHVQTLHEPIGVAGQIIP---WNFPLLMFAWKVGPALACGNTIV--LKTAE 72 (378)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~~~~AL~~Gn~vv--lkps~ 72 (378)
+.++..+...+..+....+ ...|..+..++.|+--|+++.| .-||.. .++..+||-.+|+.=| ..|++
T Consensus 79 eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypSt-vLM~avPAkvAGv~~Iv~~tPp~ 157 (425)
T COG0141 79 EALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPST-VLMNAVPAKVAGVEEIVVVTPPP 157 (425)
T ss_pred HHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHH-HHHhhccHhhcCCceEEEECCCC
Confidence 4455555555555544433 2356778889999999999999 567744 5556789999999543 45555
Q ss_pred CChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC----CCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCC
Q 017060 73 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH----MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 148 (378)
Q Consensus 73 ~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~----~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG 148 (378)
..- .+..+.-..+.+|+.. +++ + | |...-.+|.-. +.+|.|+=.|..-+..+ |.... ...-+=+.-|-
T Consensus 158 ~~g-v~p~iL~AA~~~Gv~e-Iy~-v-G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~-g~V~ID~~AGP 229 (425)
T COG0141 158 KDG-VNPEILAAARLAGVDE-VYK-V-G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS-GVVGIDMIAGP 229 (425)
T ss_pred CCC-CCHHHHHHHHHhCcHH-HHH-c-c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh-CCcccCCCCCC
Confidence 422 2333333344455432 111 1 2 33333344433 78999988887665332 11111 11111111222
Q ss_pred CCc-EEEcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHH
Q 017060 149 KSP-FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 227 (378)
Q Consensus 149 ~~~-~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~ 227 (378)
..- +|-++++|.+..+..++.-+=++.. .+.+++-.+ ++|.+++.+.+.+..--- .+.
T Consensus 230 SEvlViAD~ta~p~~vA~DLLsQAEHd~~-----a~aiLvT~s--~~la~~v~~~v~~~l~~l--------------~~~ 288 (425)
T COG0141 230 SEVLVIADETANPDFVAADLLSQAEHDPD-----AQAILVTDS--EELAEAVEAAVERQLETL--------------PRA 288 (425)
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHhhcCCC-----ceEEEEeCc--HHHHHHHHHHHHHHHHhc--------------cHH
Confidence 223 3344568999988877755543332 344666554 455555544443211000 001
Q ss_pred HHHHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEE
Q 017060 228 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 307 (378)
Q Consensus 228 ~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 307 (378)
+. +.+++ +-+| .|+-++|++|+++++|..-.- ..-
T Consensus 289 ei----~~~~l-------------------------------------~~~g---~iilv~~l~ea~~~~N~~APE-HLe 323 (425)
T COG0141 289 EI----ARKAL-------------------------------------ENYG---AIILVDDLDEAVEISNEYAPE-HLE 323 (425)
T ss_pred HH----HHHHH-------------------------------------HhCC---eEEEECCHHHHHHHHHhhChH-hhh
Confidence 11 11111 0122 455679999999999985433 456
Q ss_pred EecCCHHHHHHHHHHc-ceeEEEEcCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 017060 308 VFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 366 (378)
Q Consensus 308 v~s~d~~~~~~~~~~l-~~g~v~vN~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k 366 (378)
|.++|+. .++.++ ++|.|+++.+... +..+|= +|+-+..+..++..|.++-
T Consensus 324 i~~~~p~---~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~ 384 (425)
T COG0141 324 LQTENPR---ELLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRS 384 (425)
T ss_pred hhhcCHH---HHHHHhcccceeeecCCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHH
Confidence 8888865 677778 5999999986432 233444 4555666666777776643
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.041 Score=53.78 Aligned_cols=259 Identities=20% Similarity=0.220 Sum_probs=145.6
Q ss_pred CCCcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCeEE--EeCCCCChhhHHHHHHHHHHcCCCCCcEEEE
Q 017060 24 DGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 98 (378)
Q Consensus 24 ~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~vv--lkps~~~~~~~~~l~~~l~~aglP~g~v~~v 98 (378)
..|...-.++.|+--|+++.|. -||. +.++..+||-.+|+.=| .-|+.... ....+.-..+.+|..+ +.
T Consensus 109 ~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e----Iy 182 (425)
T PRK00877 109 APGVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE----VY 182 (425)
T ss_pred cCCeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe----ee
Confidence 3455667889999999999996 4663 45666789999998543 45554222 2333333456666543 22
Q ss_pred eCCchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceee-cCCCCc--EEEcCCcCHHHHHHHHHHHH
Q 017060 99 SGYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LGGKSP--FIVCEDADVDKAAELAHYAL 171 (378)
Q Consensus 99 ~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e-~gG~~~--~iV~~dadl~~aa~~i~~~~ 171 (378)
.-.|...-.+|. +-|++|.|+=.|..=+.. ++.... + .|-.. +.|-+= +|-+++||.+..+..++.-+
T Consensus 183 ~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~-g--~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQA 257 (425)
T PRK00877 183 KVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVF-G--VVGIDMIAGPSEILVIADETADPDFVAADLLSQA 257 (425)
T ss_pred ccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHc-C--CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 211333223332 346888888777765533 121111 1 11111 123222 33445689988887777555
Q ss_pred hhcCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCc
Q 017060 172 FFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 249 (378)
Q Consensus 172 ~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~ 249 (378)
=+... .+.++|-.+ +.++..+.+.+++..+. + .+.++++++
T Consensus 258 EHd~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~ia~~sl~---------- 300 (425)
T PRK00877 258 EHDPD-----AQSILVTTSEELAEAVAAEVERQLATLP------------------R----AEIARASLE---------- 300 (425)
T ss_pred ccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHH----------
Confidence 33332 334555443 23333333333333211 0 011111111
Q ss_pred ccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEE
Q 017060 250 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSV 328 (378)
Q Consensus 250 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v 328 (378)
-+| .++.++|+||+++++|..-.- ...|.++|+. .+..++ ++|.|
T Consensus 301 ---------------------------~~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGai 346 (425)
T PRK00877 301 ---------------------------GQG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAI 346 (425)
T ss_pred ---------------------------hCC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCcccee
Confidence 122 345679999999999985433 3568888864 677777 59999
Q ss_pred EEcCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 329 WINCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 329 ~vN~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++..+... +..+|= +|..+..+..+...|+++-++.
T Consensus 347 FlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 347 FLGPYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred ccCCCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 99875431 122333 5667888888999998876653
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.052 Score=53.03 Aligned_cols=259 Identities=17% Similarity=0.191 Sum_probs=145.6
Q ss_pred CCcceeeeeeeceEEEEEcCC-Ccch-HHHHHhhhchhccCCeEE--EeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPW-NFPL-LMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~~~~AL~~Gn~vv--lkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 100 (378)
.|...-.++.|+--|+++.|. .+|+ .+.++..+||-.+|+.=| .-|+.........|+ ....+|..+ +..-
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE----IYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe----ehhc
Confidence 455667789999999999995 3333 345666789999998544 455533223333333 446666543 2221
Q ss_pred CchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec-CCCC--cEEEcCCcCHHHHHHHHHHHHhh
Q 017060 101 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKS--PFIVCEDADVDKAAELAHYALFF 173 (378)
Q Consensus 101 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~-gG~~--~~iV~~dadl~~aa~~i~~~~~~ 173 (378)
.|...-.+|. +-|++|.|+=.|..-+..+ +.... . .|-..+ .|-+ -+|-++++|.+..+..++.-+=+
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-g--~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 254 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQLF-G--RVGIDLFAGPTETLVIADDTADPELVATDLLGQAEH 254 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc-C--ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 1333222332 2478999987777655332 22111 1 121111 2333 23444568999888777755543
Q ss_pred cCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017060 174 NQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 174 ~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
... .+.++|-.+ +.++..+.+.+++..+. + .+.++++++
T Consensus 255 d~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~sl~------------ 295 (426)
T PRK12447 255 GPN-----SPAVLITTSRKLAEEVLAEIERLLAILP------------------T----ADVASAAWR------------ 295 (426)
T ss_pred CCC-----CceEEEECCHHHHHHHHHHHHHHHHhCC------------------H----HHHHHHHHH------------
Confidence 332 334555443 23444444444333221 0 011122211
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEE
Q 017060 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWI 330 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~v 330 (378)
-+| .++.++|++|+++++|..-.- ...|.++|. ..+..++ ++|.|++
T Consensus 296 -------------------------~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFl 343 (426)
T PRK12447 296 -------------------------DYG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALFL 343 (426)
T ss_pred -------------------------hCC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceecc
Confidence 122 345679999999999986433 356888886 4677888 5999999
Q ss_pred cCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 331 NCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 331 N~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
..+... +..+|= +|..+..+..+..+|.+.-++.
T Consensus 344 G~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 344 GERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred CCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeEE
Confidence 765431 223343 5667888888889998876553
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.03 Score=54.52 Aligned_cols=261 Identities=20% Similarity=0.222 Sum_probs=123.3
Q ss_pred CCcceeeeeeeceEEEEEcCC-Ccch-HHHHHhhhchhccCCeEE--EeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPW-NFPL-LMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~~~~AL~~Gn~vv--lkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 100 (378)
.|...-.++.|+--|+++.|. .+|+ .+.++.++||-.+|..=| .-|+...-.....+.-....+|..+ |--+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence 466667889999999999993 3343 345666789999998544 4555443233344555566677643 2222 2
Q ss_pred CchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceee-cCCCC--cEEEcCCcCHHHHHHHHHHHHhh
Q 017060 101 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LGGKS--PFIVCEDADVDKAAELAHYALFF 173 (378)
Q Consensus 101 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e-~gG~~--~~iV~~dadl~~aa~~i~~~~~~ 173 (378)
|...-.+|. .-|++|.|+=.|..=+..+=...... |-.. +.|-+ -+|-++++|.+..+..++.-+=+
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~-----V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD-----VGIDMIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS------EES------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC-----cccCCCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 333223333 23789999888877654422222221 1111 12322 34455678999988877766544
Q ss_pred cCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCC
Q 017060 174 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 253 (378)
Q Consensus 174 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 253 (378)
... .+.++|-.+ +++.+++.+.+.+..-. +... + .++.+++
T Consensus 247 d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~r~---~----i~~~sl~-------------- 287 (412)
T PF00815_consen 247 DPD-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LPRR---E----IAEKSLE-------------- 287 (412)
T ss_dssp -TT------EEEEEES---HHHHHHHHHHHHHHHTT------------TTH---H----HHHHHHT--------------
T ss_pred CCC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CCch---H----HHHHHHH--------------
Confidence 443 233566544 44555544444321100 0000 0 1111111
Q ss_pred CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEEcC
Q 017060 254 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 332 (378)
Q Consensus 254 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~ 332 (378)
+| .++.++|++|+++++|..-.- ...|.++|+ +++.+++ ++|.|++..
T Consensus 288 ------------------------~g---~ii~~~~l~ea~~~~N~~APE-HLel~~~~~---~~~~~~i~~AGaiFlG~ 336 (412)
T PF00815_consen 288 ------------------------NG---AIIVVDSLEEAIELANEYAPE-HLELQVEDP---EELLEKIRNAGAIFLGE 336 (412)
T ss_dssp ------------------------T----EEEE-SSHHHHHHHHHHH--S-EEEEESTTH---HHHGGG--S-SEEEEST
T ss_pred ------------------------CC---eEEEECCHHHHHHHHHHhhHH-HHHHHHcCH---HHHHHHhhccChhhcCC
Confidence 11 456779999999999985433 567889886 4677888 599999997
Q ss_pred CCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 333 FDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 333 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+.. .+..+|=+ |..+..|..+...|++.-++.
T Consensus 337 ~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 337 YTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp T--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEEEE
T ss_pred CCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceeeEE
Confidence 643 13445554 456777778888998876654
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.072 Score=51.64 Aligned_cols=259 Identities=19% Similarity=0.186 Sum_probs=143.6
Q ss_pred CCcceeeeeeeceEEEEEcCCC-cch-HHHHHhhhchhccCCeEE--EeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWN-FPL-LMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n-~P~-~~~~~~~~~AL~~Gn~vv--lkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 100 (378)
.|...-.++.|+--|+++.|.- +|+ .+.++..+||-.+|+.=| .-|+...-.....+.-..+.+|..+ +..-
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e----iy~v 157 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE----IYKV 157 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE----Eecc
Confidence 4667788999999999999964 443 345666789999998544 4555432222233333445666443 2222
Q ss_pred CchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceee-cCCCC--cEEEcCCcCHHHHHHHHHHHHhh
Q 017060 101 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LGGKS--PFIVCEDADVDKAAELAHYALFF 173 (378)
Q Consensus 101 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e-~gG~~--~~iV~~dadl~~aa~~i~~~~~~ 173 (378)
.|...-.+|. +-|.+|.|+=.|..-+..+ +.... . .+-.. ..|-+ -+|-+++||.+..+..++.-+=+
T Consensus 158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~-g--~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH 232 (390)
T cd06572 158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVS-G--DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEH 232 (390)
T ss_pred CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhc-C--CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhcc
Confidence 2333333333 3578898887776655332 11111 1 11111 12322 33445568999888777654433
Q ss_pred cCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017060 174 NQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 174 ~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
.. ..+.+++-.+ ..++..+.+.+.+..+. .. + .++.+.
T Consensus 233 ~~-----~a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~---~----~~~~~~------------- 272 (390)
T cd06572 233 DP-----DSQAILVTTSEELAEAVEEEVERQLAELP---------------RR---E----IAAKSL------------- 272 (390)
T ss_pred CC-----CCeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH---H----HHHHHH-------------
Confidence 22 1334555443 23333334433333221 00 0 011111
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEE
Q 017060 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWI 330 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~v 330 (378)
+-+| .++.++|++|+++++|..-.- ..-|+++|.. .+..++ ++|.|++
T Consensus 273 ------------------------~~~g---~ii~~~~~~eai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGsiFl 321 (390)
T cd06572 273 ------------------------LDYG---AIILVDDLEEAIELANEYAPE-HLELQTEDPE---ELLEKIRNAGSIFL 321 (390)
T ss_pred ------------------------HhCC---EEEEECCHHHHHHHHHhhchh-hheeHhcCHH---HHHhhCccceEEee
Confidence 0112 455679999999999985433 4568888865 477777 5999999
Q ss_pred cCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 017060 331 NCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368 (378)
Q Consensus 331 N~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~ 368 (378)
..+... ++.+|- +|..+..+..+...|+++-++
T Consensus 322 G~~tp~a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 322 GPYTPEALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred cCCCchhhhccccCCCCccCC-----CcceeecCCCCHHHheeccee
Confidence 876431 234555 455677777788888876555
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.074 Score=52.05 Aligned_cols=259 Identities=20% Similarity=0.207 Sum_probs=143.9
Q ss_pred CCcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCeEE--EeCCCCC-hhhHHHHHHHHHHcCCCCCcEEEE
Q 017060 25 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIV--LKTAEQT-PLSALYVSKLLHEAGLPPGVLNIV 98 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~vv--lkps~~~-~~~~~~l~~~l~~aglP~g~v~~v 98 (378)
.|...-.++.|+.-|+++.|. -|| .+.++.++||-.+|+.=| .-|+... ......|+ ..+.+|..+ +.
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy 183 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLP-STALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH----IL 183 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCcc-HHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe----ee
Confidence 455667889999999999996 455 345666789999998543 4555321 22333333 456666543 22
Q ss_pred eCCchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCC-Ccceee-cCCCCc--EEEcCCcCHHHHHHHHHHH
Q 017060 99 SGYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLE-LGGKSP--FIVCEDADVDKAAELAHYA 170 (378)
Q Consensus 99 ~~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~-~~v~~e-~gG~~~--~iV~~dadl~~aa~~i~~~ 170 (378)
.-.|...-.+|. .-|++|.|+=.|..-+..+ +.... .. .-|-.. ..|-+= +|-++++|.+.++..++.-
T Consensus 184 ~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQ 260 (431)
T PLN02926 184 KAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAA--KMILQ-NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQ 260 (431)
T ss_pred ccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHH--HHHhh-CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 211333223332 2468898887777655331 11111 10 001111 123332 3344568888888777755
Q ss_pred HhhcCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCC
Q 017060 171 LFFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 248 (378)
Q Consensus 171 ~~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg 248 (378)
+=+... .+.++|-.+ +.++..+.+.++++.+. + .+.+++++
T Consensus 261 AEHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~sl---------- 303 (431)
T PLN02926 261 AEHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP------------------R----GEIASKAL---------- 303 (431)
T ss_pred hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHH----------
Confidence 543332 334555444 22333333333332211 0 01111111
Q ss_pred cccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeE
Q 017060 249 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGS 327 (378)
Q Consensus 249 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~ 327 (378)
.- -.++.++|++|+++++|..-.- ...|+++|. +.+..++ ++|.
T Consensus 304 ------------------------------~~-g~iivv~~l~ea~~~~N~~APE-HLei~~~~~---~~~l~~i~nAGa 348 (431)
T PLN02926 304 ------------------------------GH-SFIVVARDMAEAISFSNLYAPE-HLIVNVEDA---ESWLDKIDNAGS 348 (431)
T ss_pred ------------------------------HC-CEEEEECCHHHHHHHHHhhChH-hheehhcCH---HHHHhhcCccce
Confidence 11 2456779999999999985433 345888886 4677777 5999
Q ss_pred EEEcCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 328 VWINCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 328 v~vN~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
|++..+... +..+|= +|..+..|..+...|+++-++.
T Consensus 349 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 349 VFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred eccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeEE
Confidence 999765431 233444 5567788888889998866553
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.099 Score=50.91 Aligned_cols=258 Identities=15% Similarity=0.184 Sum_probs=144.3
Q ss_pred CCcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCeEE--EeCCCCChhhHHHHHHHHHHcCCCCCcEEEEe
Q 017060 25 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 99 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~vv--lkps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 99 (378)
.|...-.++.|+--|+++.|. -|| .+.++..+||-.+|+.=| .-|+...... ..+.-..+.+|... +..
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPp~~~~i~-p~iL~Aa~~~Gv~e----Iy~ 173 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYP-STVLMTATLAQVAGVENIVVVTPPQPNGVS-QEVLAACYITQVNQ----VFQ 173 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCcc-HHHHHhhccHhhcCCCeEEEEeCcCCCCCC-HHHHHHHHHcCCCe----eec
Confidence 455567789999999999996 355 345666789999999544 3555332222 23333446666543 222
Q ss_pred CCchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceee-cCCCC--cEEEcCCcCHHHHHHHHHHHHh
Q 017060 100 GYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LGGKS--PFIVCEDADVDKAAELAHYALF 172 (378)
Q Consensus 100 ~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e-~gG~~--~~iV~~dadl~~aa~~i~~~~~ 172 (378)
-.|...-.+|. +-|++|.|+=.|..=+..+ +.... . .|-.. ..|-+ .+|-++++|.+..+..++.-+=
T Consensus 174 iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-g--~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE 248 (416)
T PRK13770 174 VGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYLF-G--QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAE 248 (416)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc-C--CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhc
Confidence 11333222332 2478888887776655331 11111 1 11111 12322 3344556899988877775553
Q ss_pred hcCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcc
Q 017060 173 FNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 250 (378)
Q Consensus 173 ~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~ 250 (378)
+... .+.++|-.+ +.++..+.+.+++..+. +. +.++++++
T Consensus 249 Hd~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp------------------r~----~i~~~al~----------- 290 (416)
T PRK13770 249 HDEL-----ARTYVISEDAQVLKDLESRIAKALPNVD------------------RY----DIVSKSIA----------- 290 (416)
T ss_pred cCCC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC------------------hH----HHHHHHHH-----------
Confidence 3332 334555433 33444444444333221 00 11111111
Q ss_pred cCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEE
Q 017060 251 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVW 329 (378)
Q Consensus 251 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~ 329 (378)
-+| .++.++|+||+++++|..-.- ..-|.++|. +.+..++ ++|.|+
T Consensus 291 --------------------------~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiF 337 (416)
T PRK13770 291 --------------------------NQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVGALF 337 (416)
T ss_pred --------------------------hCC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEeceec
Confidence 122 345679999999999985433 345888886 4677888 499999
Q ss_pred EcCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 330 INCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 330 vN~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+..+... +..+|= +|..+..+..+...|++.-++.
T Consensus 338 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 338 IGHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred cCCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceeeE
Confidence 9876431 223444 5566777777888888876553
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0014 Score=72.75 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=78.4
Q ss_pred cCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEe
Q 017060 20 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 99 (378)
Q Consensus 20 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 99 (378)
.+|+++|+++.....|+|+|+|+++..- ..+.+++.+|++||.+|+..++. ... ++ +++|..+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~---~~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL---HRA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch---hHH----HH--HhccHHHHhHhh
Confidence 4788999999999999999999987433 57889999999999988874432 222 22 348888877653
Q ss_pred CCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC
Q 017060 100 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 139 (378)
Q Consensus 100 ~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~ 139 (378)
-. .........++.|.|.|..+..+.+.+..+++.+
T Consensus 1240 ~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1240 LA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred hc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 21 1122234569999999999999999998888554
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.44 Score=45.83 Aligned_cols=248 Identities=17% Similarity=0.210 Sum_probs=135.1
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEE--eCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCCc
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG 102 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~ 102 (378)
.|...-.++.|+--|+++.|.-|| .+.+...++|-.+|+.=|+ -|+ .. .....|+ ..+.+|..+ |--+ | |
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp-~~-i~p~vL~-aa~~~Gv~e--Iy~v-G-G 154 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPP-RG-VTGELLA-VAKELGVKG--VLAI-G-G 154 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCC-CC-CCHHHHH-HHHHcCCCe--eecc-c-C
Confidence 555667789999999999997666 4566678899999995444 343 22 2333333 456666543 1112 2 3
Q ss_pred hhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCC
Q 017060 103 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182 (378)
Q Consensus 103 ~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 182 (378)
...-.++...-++|.|+=.|..-+..+=..... ..-+=.--|-..-+|+-+++|.+..+..++.-+=+... .
T Consensus 155 AQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~-----a 226 (368)
T PRK13769 155 PHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ---YVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT-----S 226 (368)
T ss_pred HHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhC---CcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC-----C
Confidence 222234443337888877776654331111111 11111112333445555567777766666544422221 3
Q ss_pred CeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeeecee
Q 017060 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTV 262 (378)
Q Consensus 183 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 262 (378)
+.+++-.+ +++.+++.+.+.+. +.. .
T Consensus 227 ~~iLvT~s--~~la~~V~~~v~~~---------------------------~~~-----~-------------------- 252 (368)
T PRK13769 227 FAYLLSTD--AELLKAAEEIYRRE---------------------------RTS-----S-------------------- 252 (368)
T ss_pred cEEEEECC--HHHHHHHHHHHHHH---------------------------HHh-----c--------------------
Confidence 34555444 44455544433310 000 0
Q ss_pred eccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEEcCCCCC-----
Q 017060 263 FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF----- 336 (378)
Q Consensus 263 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~~~~~----- 336 (378)
.|- ..++.++|++|+++++|..-.- ...|.+. +.+..++ ++|.|+++.+...
T Consensus 253 ---------------~~~-~~iivv~~leeai~~~N~~APE-HLel~~~-----~~~~~~i~nAGsiFl~~p~a~GDY~a 310 (368)
T PRK13769 253 ---------------MGP-LEVRKVAGVEEAVRFIDEIAPE-HLEVWGR-----REVAYRVRNVGAVSVNMPSPYLDYVA 310 (368)
T ss_pred ---------------CCC-CeEEEECCHHHHHHHHHhhChH-heEeeCc-----HHHHhhCCccCChhcCCchhhhcccc
Confidence 000 2567789999999999985332 2334452 2355677 5999999553222
Q ss_pred --CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 337 --DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 337 --~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+..+|= +|..+..|..+...|+++-++.
T Consensus 311 GpNHvLPT-----~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 311 GISHVLPT-----GGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred CCCCcCCC-----CcceeccCCCcHHHcccceeEE
Confidence 122343 5567777888888888866553
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.64 E-value=1.4 Score=44.42 Aligned_cols=108 Identities=17% Similarity=0.203 Sum_probs=75.0
Q ss_pred CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeC
Q 017060 21 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 21 ~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 100 (378)
+++++|++++....|.|-|+++.+ +....+.+++.+|+.||.+++-+... +++.+.. +|.++-..+.-
T Consensus 629 LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~-------~aa~~~~--l~~~v~~~~~~ 696 (769)
T COG4230 629 LPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSG-------LAALLKD--LPSAVASRIQV 696 (769)
T ss_pred cCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcch-------HHHHHHh--chhhhhhheee
Confidence 677889999999999999999865 55667889999999999999876432 2222222 55554333222
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec
Q 017060 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 146 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~ 146 (378)
.++ + ...-.++.+.|.|..+..+.+.+..+.+. .|++.-.
T Consensus 697 ~~~----~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~-Gpiv~~~ 736 (769)
T COG4230 697 AKD----W-TADIPFDAVLFHGDSDRLRALCEAIAARD-GPIVSVQ 736 (769)
T ss_pred ccc----h-hhccceeeEEecCCHHHHHHHHHHHhcCC-CCeEEee
Confidence 122 2 23446899999999999999988777633 3544433
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.06 E-value=0.24 Score=49.10 Aligned_cols=111 Identities=13% Similarity=0.057 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceE---EeeecCCHHHHHHHHH
Q 017060 222 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ---SILKYKDLDEVIQRSN 298 (378)
Q Consensus 222 ~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl---~v~~~~~~~eai~~~n 298 (378)
.+..++.+++..+.+.++++..++...+.. +.|-.+.++...+++.....++ .|++.. .........+...+.+
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 355677888888888888887777666543 3566778888777776655544 344433 2334455667778889
Q ss_pred cCCCCc--eEEEec-CCHHHHHHHHHHcceeEEEEcCCCC
Q 017060 299 ASQYGL--AAGVFT-HNLDTANTLMRALRVGSVWINCFDV 335 (378)
Q Consensus 299 ~~~~gl--~~~v~s-~d~~~~~~~~~~l~~g~v~vN~~~~ 335 (378)
+.+.|. ..+.|. .=.-.+.+++-.|.+|+++||-+..
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 999994 555665 4345677899999999999998654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 378 | ||||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-138 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-138 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-138 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-138 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-137 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-137 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-137 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-137 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-136 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-136 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-135 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-135 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-126 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-94 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 6e-94 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-93 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 4e-93 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 4e-93 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-92 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-90 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-87 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-87 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-86 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-86 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-86 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 3e-83 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 5e-82 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 7e-81 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 5e-79 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-78 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-76 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 4e-74 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-74 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 3e-73 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 7e-73 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-71 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 7e-71 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-70 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-70 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 6e-68 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 7e-66 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-65 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-64 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-64 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-64 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 6e-64 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 2e-63 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 7e-62 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-61 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 3e-60 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-58 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-57 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-53 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 7e-53 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 6e-52 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 8e-52 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-51 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-50 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-49 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 5e-49 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-48 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-48 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 8e-48 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-47 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 7e-46 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 9e-46 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-45 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 7e-45 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-44 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-44 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 7e-44 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 7e-43 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 9e-41 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 8e-39 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-37 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 1e-36 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-34 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 5e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-34 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-33 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-32 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-28 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 8e-28 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-27 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 4e-27 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-14 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 2e-14 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 2e-14 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 2e-14 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 2e-13 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-08 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 4e-06 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 2e-05 |
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 378 | |||
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-179 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-175 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-174 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-168 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-167 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-156 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-154 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-150 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-144 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-144 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-137 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-136 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-136 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-135 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-134 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-132 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-131 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-130 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-118 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-108 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-108 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-101 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 6e-86 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 1e-83 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 1e-81 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 2e-78 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 3e-76 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 2e-66 |
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 708 bits (1831), Expect = 0.0
Identities = 226/376 (60%), Positives = 281/376 (74%), Gaps = 2/376 (0%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL
Sbjct: 125 GCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPAL 184
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AF
Sbjct: 185 SCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAF 244
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC
Sbjct: 245 TGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCI 304
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG
Sbjct: 305 AASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKE 364
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N +
Sbjct: 365 GAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNT 424
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGL+AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y
Sbjct: 425 FYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFH 484
Query: 361 NYLQVKAVVTAL--KN 374
Y +VK V + KN
Sbjct: 485 EYTEVKTVTIKISQKN 500
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 708 bits (1829), Expect = 0.0
Identities = 231/372 (62%), Positives = 278/372 (74%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 124 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 183
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF
Sbjct: 184 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 243
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC C
Sbjct: 244 TGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSC 303
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 304 AGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 363
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 364 GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 361 NYLQVKAVVTAL 372
Y +VK V +
Sbjct: 484 AYTEVKTVTVKV 495
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 693 bits (1790), Expect = 0.0
Identities = 165/374 (44%), Positives = 245/374 (65%), Gaps = 6/374 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGP----YHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 56
M+ + FRY+AGW DKIQG T P + T EP+GV G +IPWN+PL+M +WK
Sbjct: 140 MSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKT 199
Query: 57 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 116
LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G L+ H +V
Sbjct: 200 AACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVR 259
Query: 117 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176
K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKG 319
Query: 177 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236
+ C A R FV ES+++QFV+K K +G+P + GPQ K+++Y +
Sbjct: 320 ENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQR 379
Query: 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVI 294
GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+
Sbjct: 380 GVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+KQSG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 355 GSYSLSNYLQVKAV 368
G +L+ YL++K V
Sbjct: 500 GEAALNEYLRIKTV 513
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 685 bits (1770), Expect = 0.0
Identities = 162/381 (42%), Positives = 221/381 (58%), Gaps = 4/381 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 59
L+ Y AG A ++G T G L EP+GV G I PWNFP ++ + +V A
Sbjct: 126 FCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWA 185
Query: 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
+ G T+VLK +E T +++ +++L EAG+P GV N+V+GYG AG LA VD +A
Sbjct: 186 IGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVA 245
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
FTGS G + ++AA+ +K V LELGGK P IV DAD+D AA+ Y ++ N GQCC
Sbjct: 246 FTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCC 304
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
+GSR V E + D +E+ ++ K GDP + G I EK+ Y+ +G+
Sbjct: 305 ISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGIT 364
Query: 240 GGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
GA+L GGER+G G Y PTVF GV DM IA++EIFGPV S L +K DE + +N
Sbjct: 365 SGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALAN 424
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 358
A+++GL+A V++ NL+TA +R +R G WIN +P GGYK+SG GRE G Y
Sbjct: 425 ATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYG 484
Query: 359 LSNYLQVKAVVTALKNPA-WL 378
Y Q K V L PA W
Sbjct: 485 FDEYSQFKGVHVTLGRPAPWF 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 681 bits (1761), Expect = 0.0
Identities = 160/383 (41%), Positives = 225/383 (58%), Gaps = 7/383 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 56
F YYA A+K+ + L EPIGV G I PWN+P+LM WKV
Sbjct: 113 DVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKV 172
Query: 57 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 116
PALA G +LK +E L+ L + ++ E GLPPGVLNI++G GP AGA LA+H +VD
Sbjct: 173 APALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVD 232
Query: 117 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176
K+AFTGS+ TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ G
Sbjct: 233 KVAFTGSSATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNG 291
Query: 177 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236
Q C A SR +HES+ +F+ + + DP + G + GP + Q+EKILK++ +
Sbjct: 292 QICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSN 351
Query: 237 GVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 294
GA + TGG R KG++I+PT+ T V +M I ++E+FGPV + + +E I
Sbjct: 352 AKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAI 411
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
+N + YGL A V +++L+ + +A + G VW+NC P+GG K+SG GRE
Sbjct: 412 DLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGREL 471
Query: 355 GSYSLSNYLQVKAVVTALKNPAW 377
G + L NYL VK V + W
Sbjct: 472 GEWGLDNYLSVKQVTQYISEEPW 494
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 681 bits (1760), Expect = 0.0
Identities = 146/382 (38%), Positives = 214/382 (56%), Gaps = 6/382 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 59
+F Y+AG ADK G + P + + EP+GV QI PWN+PLL +WK+ PA
Sbjct: 135 DIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPA 194
Query: 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
LA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G G ++ H EVD ++
Sbjct: 195 LATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVS 254
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A +F+ GQ C
Sbjct: 255 FTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVC 313
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
AGSR V S+ D+F + K +G+ F + GP I +E KI Y+
Sbjct: 314 SAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKA 373
Query: 240 GGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 295
GA + GG+R G + +PTV T M I ++E+FGPV ++ ++ E IQ
Sbjct: 374 EGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQ 433
Query: 296 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 355
+N S YGLA VF+ ++ A + L++G+VWIN F + A P+GGYKQSG GRE G
Sbjct: 434 LANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELG 493
Query: 356 SYSLSNYLQVKAVVTALKNPAW 377
L YL K ++T
Sbjct: 494 KEGLEEYLVSKHILTNTNPQLV 515
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 673 bits (1739), Expect = 0.0
Identities = 147/378 (38%), Positives = 218/378 (57%), Gaps = 8/378 (2%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ YYAG A + G G T EP+GV I+ WN+P ++ AWK PAL
Sbjct: 121 AAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPAL 180
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K++F
Sbjct: 181 ACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSF 239
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ C
Sbjct: 240 TGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCT 298
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
G+R FV + QF+E+ VVGDP + G I Q +K+L ++
Sbjct: 299 NGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358
Query: 241 GAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 294
GA++ GGE L GY++ P V +DDM K+EIFGPV S+L + +EV+
Sbjct: 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVL 418
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK SG GRE
Sbjct: 419 QRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGREN 478
Query: 355 GSYSLSNYLQVKAVVTAL 372
G ++ Y Q+K V+ +
Sbjct: 479 GQATVDYYSQLKTVIVEM 496
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 670 bits (1731), Expect = 0.0
Identities = 157/380 (41%), Positives = 228/380 (60%), Gaps = 11/380 (2%)
Query: 6 FRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
F +YA +A+ ++ T P D + T+ P G G I PWN PL++ W++ PALA GN
Sbjct: 132 FAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGN 191
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK AE +P +A ++++L EA LPPGV N+V G+G AGAAL +H V L TG T
Sbjct: 192 TVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGET 251
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + + +F G+ C A SR
Sbjct: 252 ETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSR 310
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
V E +++ FV K A VG P + GP I E +++L Y+ +G GA+L
Sbjct: 311 LLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARL 370
Query: 245 ETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296
GGER ++G Y+ PTVF G ++ M IA++EIFGPV + +KD +E +++
Sbjct: 371 LVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRK 429
Query: 297 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 356
+N ++YGLAA VFT +L+ A+ L L G V++N +V PFGG K SG RE G+
Sbjct: 430 ANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGT 489
Query: 357 YSLSNYLQVKAVVTALKNPA 376
Y+L Y +K + L+ P
Sbjct: 490 YALDFYTDLKTIALPLRPPH 509
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 665 bits (1718), Expect = 0.0
Identities = 154/381 (40%), Positives = 217/381 (56%), Gaps = 7/381 (1%)
Query: 1 MTTRLFRYYAGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 59
F ++ G A + G P G T P+GV I WN+P + WK PA
Sbjct: 116 SGADAFEFFGGIAPSALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPA 174
Query: 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
L GN +V K +E TPL AL ++++L EAGLP G+ N++ G T G L +H +V K++
Sbjct: 175 LVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVS 233
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
TGS TG+ V AA +LK VT+ELGGKSP IV +DAD++ A A F++ GQ C
Sbjct: 234 LTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVC 292
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
G+R FV + +F+E ++GDP GP + Q EK+L YI G
Sbjct: 293 SNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKA 352
Query: 240 GGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 296
GA L TGG + +G Y++PTVF V DDM IA++EIFGPV +L + D DEV+ R
Sbjct: 353 EGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLAR 412
Query: 297 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 356
+NA+++GLA GVFT +L A+ ++ L G++WIN +++ IPFGG KQSG GRE +
Sbjct: 413 ANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSA 472
Query: 357 YSLSNYLQVKAVVTALKNPAW 377
+L +Y ++K V +
Sbjct: 473 AALEHYSELKTVYVSTGKVDA 493
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 653 bits (1688), Expect = 0.0
Identities = 134/365 (36%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
FR++AG A + GL A + +P+GV I PWN+PL+M AWK+ PALA GN
Sbjct: 129 FRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGN 188
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
+VLK +E TPL+AL +++L + P GV+NI+ G G T G L H +V ++ TGS
Sbjct: 189 CVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSI 247
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
TG+ ++ A S++K +ELGGK+P IV +DAD++ E ++N GQ C A R
Sbjct: 248 ATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACR 306
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAK 243
+ + +YD VEK A G P + GP E++ K + G K
Sbjct: 307 IYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIK 366
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
+ TGGE+ GYY PT+ G D I + E+FGPV S+ + + ++V+ +N SQYG
Sbjct: 367 VITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYG 426
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
LA+ V+T ++ A+ + L+ G W+N + + +P GG K SG G++ Y L +Y
Sbjct: 427 LASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYT 486
Query: 364 QVKAV 368
V+ V
Sbjct: 487 VVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 653 bits (1688), Expect = 0.0
Identities = 125/374 (33%), Positives = 198/374 (52%), Gaps = 4/374 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 59
+R++AG + A P + +PIG+ G I PWN+PL+M AWK+ PA
Sbjct: 126 AIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPA 185
Query: 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 119
+ GNT+V K +EQTPL+AL +++L+ + LP GV+N+++G G T G AL +H +V ++
Sbjct: 186 IGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVS 244
Query: 120 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
TG TGK VL AAK +K LELGGK+P IV DAD++ ++N GQ C
Sbjct: 245 ITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDC 303
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
A R + +Y++ V + + GP I Q +++ ++ D
Sbjct: 304 TAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAAD 363
Query: 240 -GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
++ TGG +G++ +PTV G + I + E+FGPV S+ ++ D+ + +N
Sbjct: 364 QKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWAN 423
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 358
S YGLA+ V+T ++ A L+ G WIN + +P GG KQSG G++ Y+
Sbjct: 424 DSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYA 483
Query: 359 LSNYLQVKAVVTAL 372
L +Y V+ ++
Sbjct: 484 LEDYTAVRHIMINH 497
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 605 bits (1562), Expect = 0.0
Identities = 144/379 (37%), Positives = 204/379 (53%), Gaps = 5/379 (1%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ Y+AG ADK+ EP+GV G I+ WN PL + K+ PAL
Sbjct: 112 GSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPAL 171
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
G TIVLK A +TPL+A ++++ E GLP GVL++V G G G AL S+ ++D F
Sbjct: 172 LAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTF 230
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS+ G+ V + AA+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C
Sbjct: 231 TGSSAVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCV 289
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
+R S YD+ V VG P Q GP I +Q ++ YI G++
Sbjct: 290 NQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEE 349
Query: 241 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
GA+L GG R G++I+PTVF V + M IA++EIFGPV +I+ Y ++ I +N
Sbjct: 350 GARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAN 409
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 358
S YGLA V+T ++ + + +R G+ IN + FD PFGGYK SG GRE G
Sbjct: 410 DSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEG 468
Query: 359 LSNYLQVKAVVTALKNPAW 377
+ ++ Q K+V+ +
Sbjct: 469 VEHFTQQKSVLLPMGYTVA 487
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 598 bits (1544), Expect = 0.0
Identities = 135/372 (36%), Positives = 192/372 (51%), Gaps = 10/372 (2%)
Query: 6 FRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
YYA ++ +G + + + P+GV I PWNF L + + GN
Sbjct: 142 LEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGN 201
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK A TP+ A ++L +AGLP GV+N V G G G L H + + FTGS
Sbjct: 202 TVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSK 261
Query: 125 TTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
G + + AA ++LK V +E+GGK +V DAD+D AAE + F GQ C
Sbjct: 262 DVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKC 321
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
AGSR +H+ VYD+ +EK ALA VGDP GP ID + FEKI+ YI G
Sbjct: 322 SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381
Query: 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
G +L TGGE + G++I+PT+ + + +I ++EIFGPV + K D D ++ +N
Sbjct: 382 EG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANN 440
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKGS 356
++YGL V T N R VG+++ N C PFGG+K SG + G
Sbjct: 441 TEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGP 500
Query: 357 YSLSNYLQVKAV 368
L+ ++Q K V
Sbjct: 501 DYLALHMQAKTV 512
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 593 bits (1532), Expect = 0.0
Identities = 137/366 (37%), Positives = 205/366 (56%), Gaps = 6/366 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
R + + A +G ++ IGV G I PWN+P+ KV PAL G T
Sbjct: 132 IRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCT 191
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+VLK +E PLSA+ +++L EA LP GV N+++G G G+ L++H +++ ++FTGST
Sbjct: 192 MVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTR 251
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
GK + + A+ LK V LELGGK I+ DAD+D A + F+N GQ C A +R
Sbjct: 252 AGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRM 309
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
V +++YD+ ++ A +A K VG + G GP + EQ++KI I+SG+D GA L
Sbjct: 310 LVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLV 369
Query: 246 TGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
TGG L +GYY++PTVF VK M I ++EIFGPV S+L + DE + +N ++Y
Sbjct: 370 TGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEY 429
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 362
GL + + + + +R G V +N + FGG K SG+ RE G + + +
Sbjct: 430 GLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHE-LPGGSYFGGVKFSGRAREGGLWGIKEF 488
Query: 363 LQVKAV 368
L KA+
Sbjct: 489 LDTKAI 494
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 588 bits (1518), Expect = 0.0
Identities = 144/372 (38%), Positives = 216/372 (58%), Gaps = 9/372 (2%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M F D + D + E IGV+G I PWNFP + K+ A
Sbjct: 109 MGLNHFVAARDALDNYEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAF 164
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A G+ +VLK +E+TP +A+ ++++ + G+P GV N+V+G G G L+ H +V ++F
Sbjct: 165 AAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSF 224
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS TG +++ AAK + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C
Sbjct: 225 TGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCT 283
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AG+R V + D F+ + + VG+P + G Q GP I +QF+++ YI G++
Sbjct: 284 AGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEE 343
Query: 241 GAKLETGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297
GA+L GG KGY+ +PT+F V + M IA++EIFGPV S++ Y DLDE IQ +
Sbjct: 344 GAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIA 403
Query: 298 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 357
N ++YGLA V + +T + + R++ G+V IN +PFGGYKQSG GRE G Y
Sbjct: 404 NDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQSGLGREWGDY 462
Query: 358 SLSNYLQVKAVV 369
+ +L+VK++
Sbjct: 463 GIEEFLEVKSIA 474
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 579 bits (1494), Expect = 0.0
Identities = 128/373 (34%), Positives = 191/373 (51%), Gaps = 12/373 (3%)
Query: 6 FRYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
YYA A + + ++ + P+G I PWNFP+ +F + +A G
Sbjct: 142 IEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVG 201
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT++ K AE + V ++ HEAG PPGV+N + G G GA L H + + FTGS
Sbjct: 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS 261
Query: 124 TTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 178
G + + A + + K +E GGK+ IV E AD D AAE + + QGQ
Sbjct: 262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQK 321
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C A SR + + Y+ +E+ A + VG P + GP + +EQ K+L YI G
Sbjct: 322 CSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGK 380
Query: 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
+ G +L GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E ++ +N
Sbjct: 381 NEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVAN 439
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 356
+ YGL GV++ + R VG+++ N PFGG+K SG + G+
Sbjct: 440 DTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499
Query: 357 -YSLSNYLQVKAV 368
L +L++KAV
Sbjct: 500 LDYLRLFLEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 541 bits (1397), Expect = 0.0
Identities = 129/367 (35%), Positives = 194/367 (52%), Gaps = 7/367 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
+ A + ++ G +P++ P + GV G I PWNFPL + V PALA GN
Sbjct: 118 TKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGN 177
Query: 65 TIVLKTAEQTPLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
+V+K A TP++ + ++ EAG+P GV++ V+G G G +H ++FTGS
Sbjct: 178 AVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGS 237
Query: 124 TTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182
T G+ V +LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C +
Sbjct: 238 TPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSI 297
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242
+R V +V+D+F+EK GDP G GP I+ Q + + I GA
Sbjct: 298 NRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA 357
Query: 243 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
++ G +G + P VF+ V DM IA++EIFGP+ S+LK D + +NAS +
Sbjct: 358 TVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDF 414
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSN 361
GL+A V++ ++D A + G V IN V D + FGG K SG GR G +++
Sbjct: 415 GLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEE 474
Query: 362 YLQVKAV 368
+ + +
Sbjct: 475 FTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 506 bits (1305), Expect = e-179
Identities = 118/382 (30%), Positives = 173/382 (45%), Gaps = 16/382 (4%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
R KI G P D Y EP+GV I P+N+PL K+ +
Sbjct: 123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
GN +V+K + PL A K L +AG PP + +++ G + + V ++F
Sbjct: 183 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSF 241
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+ + +K +ELGG P IV EDAD+D AA+ ++ GQ C
Sbjct: 242 TGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 298
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
A VY + VE+ VGDP + GP I ++++ I V+
Sbjct: 299 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 241 GAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 297
G ++ GG RLG Y++PT DM++ K E+F PV ++ KDLD+ I+ +
Sbjct: 359 GGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 298 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-PFGGYKQSGQGREKGS 356
N YGL A VF ++ +R L VG+++IN PFGG K+SG RE
Sbjct: 417 NGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIG 476
Query: 357 YSLSNYLQVKAVVTALK-NPAW 377
Y++ K +V K W
Sbjct: 477 YAVEAVTAYKTIVFNYKGKGVW 498
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 497 bits (1282), Expect = e-175
Identities = 134/378 (35%), Positives = 187/378 (49%), Gaps = 14/378 (3%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGP 58
+ R+ A A ++ G T D EP+GV I P+N+P+ + A K+ P
Sbjct: 116 IIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAP 175
Query: 59 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 118
AL GNT+V K A Q LS + + + L +AG P G++ +V+G G G L H +D +
Sbjct: 176 ALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235
Query: 119 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 178
FTG TTTG+ ++ K+ + PV LELGGK P IV +DAD+ A F GQ
Sbjct: 236 TFTGGTTTGER---ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQR 292
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C A R FV +SV DQ V L + VG P P ID + I I +
Sbjct: 293 CTAIKRVFVQDSVADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDAL 351
Query: 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
+ GA L +G +R +G + PT+ V M +A +E FGPV I++ KD +E I SN
Sbjct: 352 ENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSN 408
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSY 357
S YGL A +FT + D A + + L VG+V IN PF G K+SG G +
Sbjct: 409 QSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKP 468
Query: 358 SLSNYLQVKAVVTALKNP 375
SL + + + V L
Sbjct: 469 SLLSMTRERVTVLNLAEN 486
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 492 bits (1270), Expect = e-174
Identities = 119/378 (31%), Positives = 196/378 (51%), Gaps = 14/378 (3%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
F+ A + + + P+D + T EP+G+ G I P+NFPL + A K+ PA+A GN
Sbjct: 102 FKLAAFYVKEHRDEVIPSDD-RLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNV 160
Query: 66 IVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
IV + + PL + ++K++ A +P GV N+++G G G + + +V+ ++FT
Sbjct: 161 IVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFT 220
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
GS+ G+++ + A K + LELGG +P IV +DAD++KA F GQ C +
Sbjct: 221 GSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCIS 277
Query: 182 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241
V ES+ D+F+E A VG+P GP I E E + K + +D G
Sbjct: 278 VGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEG 337
Query: 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 301
KL GG+R PT+ V D ++ K E F PV I++ + +E+I +N+++
Sbjct: 338 GKLLLGGKR---DKALFYPTILE-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTE 392
Query: 302 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLS 360
YGL + +FT++++ + L G V IN +F +PFGG K+SG GRE Y++
Sbjct: 393 YGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAME 452
Query: 361 NYLQVKAVVTALKNPAWL 378
+K ++ + +
Sbjct: 453 EMSNIKTIIISKAENLYF 470
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 478 bits (1232), Expect = e-168
Identities = 105/365 (28%), Positives = 156/365 (42%), Gaps = 5/365 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
+ G + H+P GV P+NFP + + PAL GN
Sbjct: 110 VAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNC 169
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+V K +E TP A K +AGLP GVLN+V G G G ALA+H +D L FTGS+
Sbjct: 170 VVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSR 228
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
TG ++ K + LE+GG +P +V E AD+D A + F + GQ C R
Sbjct: 229 TGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRL 288
Query: 186 FVHESVY-DQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
V + + D + + A++ VG + G I E +LK + GA+
Sbjct: 289 LVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQ 348
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
+ + P + V +E FGP+ +++Y D I+ +NA+QYG
Sbjct: 349 PLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYG 407
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 362
LAAG+ + + + + R G V N ++ PFGG SG R Y+
Sbjct: 408 LAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYC 467
Query: 363 LQVKA 367
A
Sbjct: 468 AYPVA 472
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 477 bits (1229), Expect = e-167
Identities = 90/417 (21%), Positives = 146/417 (35%), Gaps = 47/417 (11%)
Query: 6 FRYYAGWADKIQGLTAPADGP----------YHVQTLHEPIGVAGQIIPWNFPLLMFAWK 55
YYA + + A DG L GVA I +NFP K
Sbjct: 112 LSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEK 171
Query: 56 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHME 114
PAL G +++K A T + + +AG LPPG L+I+ G ++ L
Sbjct: 172 AAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRS 228
Query: 115 VDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKAAELAH 168
D ++FTGS T + A + ++ + I+C DA D +
Sbjct: 229 FDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVV 288
Query: 169 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 228
+ GQ C A R FV E+ + +E A K VG+P ++ G + EQ+E
Sbjct: 289 REMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYE 348
Query: 229 KILKYIRSGVDGGAKLETGGERL-----GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPV 281
+L I + + + P +F + L+ E+FGPV
Sbjct: 349 NVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPV 408
Query: 282 QSILKYKDLD--------EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 333
S+ Y+ + + Q L A +++++ L L ++
Sbjct: 409 ASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAI 468
Query: 334 DVFDAAI-----------PFGGYKQSGQGREKGSY-SLSNYLQVKAVVTALKNPAWL 378
GG ++G G E G +L+ Y + A+ A L
Sbjct: 469 SPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAASAAIGTL 525
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 448 bits (1154), Expect = e-156
Identities = 129/365 (35%), Positives = 202/365 (55%), Gaps = 3/365 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
Y A WA + +G +D P ++ +GV I+PWNFP + A K+ PAL GN
Sbjct: 112 IDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGN 171
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
TIV+K +E TP +A+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS
Sbjct: 172 TIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 231
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
+ G+ ++ AA N+ V LELGGK+P IV +DAD++ A + + N GQ C R
Sbjct: 232 SAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAER 290
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
+V + +YDQFV + G+P + I GP I++ E++ + + V+ GA+
Sbjct: 291 VYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGAR 350
Query: 244 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
+ GG+ + KGYY PT+ V+ +M I +E FGPV ++ + L++ I +N S YG
Sbjct: 351 VAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYG 410
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
L + ++T NL+ A ++ L+ G +IN + G+++SG G G + L YL
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYL 470
Query: 364 QVKAV 368
Q + V
Sbjct: 471 QTQVV 475
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-154
Identities = 126/376 (33%), Positives = 185/376 (49%), Gaps = 14/376 (3%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGP 58
+ Y A +++G EP+G+ I P+N+P+ + K+ P
Sbjct: 107 IINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAP 166
Query: 59 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 118
AL GN I K Q +S L +++ EAGLP GV N ++G G G + H V+ +
Sbjct: 167 ALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226
Query: 119 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 178
FTGST G+ + ++A ++P+ LELGGK IV EDAD++ A+ F GQ
Sbjct: 227 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQR 283
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C A R V ESV D+ VEK + +G+P P ID++ + + I
Sbjct: 284 CTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDAN 342
Query: 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
D GA T +R +G I P +F V DM +A +E FGPV I++ ++E I+ SN
Sbjct: 343 DKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISN 399
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSY 357
S+YGL A +FT++ A + L VG+V IN PF G K+SG G + Y
Sbjct: 400 KSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 459
Query: 358 SLSNYLQVKAVVTALK 373
S+ VK+VV +K
Sbjct: 460 SIEAMTTVKSVVFDIK 475
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 449 bits (1157), Expect = e-150
Identities = 121/372 (32%), Positives = 190/372 (51%), Gaps = 10/372 (2%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
YYA ++ P +EP GVA I PWNFPL + A+ GN
Sbjct: 636 LEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGN 695
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
+V K + T + ++ +L EAGLP GV N G G G L H ++ +AFTGS
Sbjct: 696 CVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSM 755
Query: 125 TTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
TG +++ AAK +N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C
Sbjct: 756 ETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKC 815
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239
A SR V ++VYD+F+E+ ++A VG G D + + I +Y G
Sbjct: 816 SACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKR 875
Query: 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299
G L +GY++ T+ G+K + IA++EIFGPV ++++ KD D+ I+ +N+
Sbjct: 876 EGHVLY-ESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANS 934
Query: 300 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGS 356
+Q+ L G+F+ + + R RVG+++IN + PFGG + SG G + G
Sbjct: 935 TQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGP 994
Query: 357 YSLSNYLQVKAV 368
L +++ + V
Sbjct: 995 DYLLHFMDPRVV 1006
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 415 bits (1070), Expect = e-144
Identities = 120/365 (32%), Positives = 184/365 (50%), Gaps = 8/365 (2%)
Query: 6 FRYYAGWADKIQGL-TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
+ ++ G+ P+D + P+GV I P+NFP+ + + PA+A G
Sbjct: 112 LDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALG 171
Query: 64 NTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 122
N++V K QT +S ++K AGLP GVLN++ G + ++ ++FTG
Sbjct: 172 NSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231
Query: 123 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 182
ST G+ + ++A K + LELGG +PF V DADVD+A + A + F +QGQ C
Sbjct: 232 STAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMII 290
Query: 183 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242
+R VH+ VYD+FVEK A + GD GP I+ Q EK L+ I G
Sbjct: 291 NRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGI 350
Query: 243 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
+L G+R+ G + P VF G ++ IA+ E+F P+ +I+K E I +N ++Y
Sbjct: 351 ELAVEGKRV---GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEY 407
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSN 361
GL++ VFT +L+ + G +N V D+ I FGG K SG GR + +
Sbjct: 408 GLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEE 467
Query: 362 YLQVK 366
+ K
Sbjct: 468 FTVTK 472
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 416 bits (1071), Expect = e-144
Identities = 107/371 (28%), Positives = 174/371 (46%), Gaps = 10/371 (2%)
Query: 6 FRYYAGWADKIQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
Y G + I G P++ H + P+G+ G I +NFP+ ++ W A+ CGN
Sbjct: 127 CDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGN 186
Query: 65 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
+ K A T L ++ V+K++ + LP + ++ G G G A+A V+ L+F
Sbjct: 187 VCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSF 245
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST GK V + + LELGG + I EDAD+ A +A GQ C
Sbjct: 246 TGSTQVGKQVGLMVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCT 304
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
R F+HES++D+ V + + VG+P+ + GP + L +
Sbjct: 305 TARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKE 364
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
G + GG+ + G Y++PT+ TG+ D IA E F P+ + K+++ +EV +N
Sbjct: 365 GGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEV 424
Query: 301 QYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSY 357
+ GL++ +FT +L + + G V +N + FGG K +G GRE GS
Sbjct: 425 KQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSD 484
Query: 358 SLSNYLQVKAV 368
+ Y++
Sbjct: 485 AWKQYMRRSTC 495
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 399 bits (1027), Expect = e-137
Identities = 138/368 (37%), Positives = 192/368 (52%), Gaps = 6/368 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
Y A I+G P+D + P GV I WNFPL + K+GPAL GN
Sbjct: 118 IDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGN 177
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK ++TPL+ + ++ EAGLP GVLN+++G G G L + TGST
Sbjct: 178 TMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGST 237
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
GK + + +A + PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R
Sbjct: 238 VAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVER 296
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
+VH SVYD+F+ K L VGDP Q GP+ + + + I + + GA +
Sbjct: 297 LYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATV 356
Query: 245 ETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
TGG+ G + +PTV VK D ++ +E FGP+ I+K +++ I+ N S
Sbjct: 357 ATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDS 416
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGL+A V T + N + L VG V+IN G+KQSG G E G + L
Sbjct: 417 IYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLE 476
Query: 361 NYLQVKAV 368
YL+ K V
Sbjct: 477 QYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 396 bits (1020), Expect = e-136
Identities = 142/368 (38%), Positives = 210/368 (57%), Gaps = 2/368 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
++A +I G T P + + +PIGV I PWNFP M K GPALA G
Sbjct: 115 IEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGC 174
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T+VLK A QTP SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST
Sbjct: 175 TMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGST 234
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G+ +++ A ++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R
Sbjct: 235 EIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANR 293
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
+V + VYD+F EK K +GD G+ GP ID + K+ ++I ++ GA++
Sbjct: 294 LYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARV 353
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
GG+ G + +PT+ V + ++K+E FGP+ + ++KD +VI ++N +++GL
Sbjct: 354 VCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGL 413
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
AA + +L + AL G V IN + + PFGG K SG GRE Y + +YL+
Sbjct: 414 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLE 473
Query: 365 VKAVVTAL 372
+K + L
Sbjct: 474 IKYMCIGL 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-136
Identities = 147/368 (39%), Positives = 213/368 (57%), Gaps = 2/368 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
++A ++ G T P + + EPIGV I PWNFP M A KVGPALA G
Sbjct: 118 IEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGC 177
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
IV+K AE TP SAL ++ L AG+P GVL++V G G + S+ V KL+FTGST
Sbjct: 178 PIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST 237
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G++++ +A +K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R
Sbjct: 238 AVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNR 296
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
FVHE VYD F +K A K VG + G GP I+ +K+ +I + GA L
Sbjct: 297 FFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASL 356
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
TGG+R + +PTV TGVK DM +AK+E FGP+ + ++ +E+++ +N +++GL
Sbjct: 357 MTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGL 416
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
AA +++ ++ + AL G V IN + + PFGG KQSG GRE Y + +Y+
Sbjct: 417 AAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVV 476
Query: 365 VKAVVTAL 372
+K + A+
Sbjct: 477 IKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-135
Identities = 147/369 (39%), Positives = 213/369 (57%), Gaps = 4/369 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
++A A ++ G T PA + + +P+GV I PWNFP M K PALA G
Sbjct: 138 IEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGC 197
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
T++++ A+ TPL+AL + L +AG+P GVL IV+G GA L S+ V KL+FTGST
Sbjct: 198 TMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGST 257
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G++++ A +K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R
Sbjct: 258 EVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANR 316
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
+V VYD+F EK A + VG+ + G+ GP I+ + K+ +I V GAKL
Sbjct: 317 IYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKL 376
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
TGG+ LG G + +P + TGV DML+AK+E FGP+ + + +EVI ++N + +GL
Sbjct: 377 ITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
AA +T N A + AL G V N + + PFGG KQSG GRE Y + YL+
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLE 494
Query: 365 VKAVVTALK 373
K + +A K
Sbjct: 495 TKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 391 bits (1006), Expect = e-134
Identities = 130/374 (34%), Positives = 191/374 (51%), Gaps = 3/374 (0%)
Query: 6 FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
F Y A + T P + P+GV G I+PWNFP+ M A K+ ALA G
Sbjct: 117 FDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGC 176
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
V+K A +TPL+ + ++ + LP G++N+V G G L H +V L+FTGST
Sbjct: 177 PSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGST 236
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G+ ++ A +K + LELGG +PFIV +DAD++ AA+ F GQ C +R
Sbjct: 237 EVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANR 295
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
FVHE V D F +K K VGD GI GP I+ + F+K+ ++++ +D GA L
Sbjct: 296 IFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASL 355
Query: 245 ETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 303
G + G + PTV GV +M ++E FGP+ + ++ +EVI N +++G
Sbjct: 356 VAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFG 415
Query: 304 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 363
LA+ VFT + + A + LR G V N PFGG K SG GRE G L ++
Sbjct: 416 LASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFV 475
Query: 364 QVKAVVTALKNPAW 377
+ + V +
Sbjct: 476 EAQTVPRGFAENLY 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 387 bits (997), Expect = e-132
Identities = 139/368 (37%), Positives = 203/368 (55%), Gaps = 6/368 (1%)
Query: 6 FRYYAGWADKIQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
+++ A ++ G L +PIGVA I PWNFP M KVG ALA G
Sbjct: 116 LEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGC 175
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV---SGYGPTAGAALASHMEVDKLAFT 121
T+V+K AE TP SAL +++L +AG+P GV N++ G A+ + V K++FT
Sbjct: 176 TVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFT 235
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
GSTTTGKI+L AA +++K V++ELGG +PFIV + A+VD+A A + F N GQ C
Sbjct: 236 GSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC 294
Query: 182 GSRTFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
++ V ++D FV+ A A+ VG+ F+ G QGP I+ + EK+ K + V
Sbjct: 295 SNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSK 354
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GA + TGG+R + +PT+ V DML +E FGP+ ++K+ +E I +NA+
Sbjct: 355 GATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAA 414
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
GLA ++ + + L VG V +N + PFGG KQSG GRE Y +
Sbjct: 415 DVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGID 474
Query: 361 NYLQVKAV 368
YL++K V
Sbjct: 475 EYLELKYV 482
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 384 bits (989), Expect = e-131
Identities = 110/370 (29%), Positives = 166/370 (44%), Gaps = 2/370 (0%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
+ YYA ++ T + L + GV PWNFPL P GN
Sbjct: 93 ICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGN 152
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
I+LK A P SA +K++ AG P G L + +A + +A TGS
Sbjct: 153 PILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIA-DPRIQGVALTGSE 211
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G V + A K NLK T+ELGG FIV +DAD + + A +N GQ C + R
Sbjct: 212 RGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKR 270
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
V +S YD+ + + + GDP + P + EK+ ++ +D GAK+
Sbjct: 271 IIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKV 330
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
+ +KG + +PT+ T + D + E+FGP+ + +D + IQ +N S YGL
Sbjct: 331 FYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGL 390
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
+ V ++D A + + G IN + +PFGG K+SG GRE L ++
Sbjct: 391 GSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN 450
Query: 365 VKAVVTALKN 374
V+ KN
Sbjct: 451 EHLVIDVTKN 460
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 379 bits (975), Expect = e-130
Identities = 115/365 (31%), Positives = 169/365 (46%), Gaps = 2/365 (0%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
L +YA + + P+GV I+PWNFPL P L GN
Sbjct: 96 LCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGN 155
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
+ +LK A A ++++L EAG P GV V+ + + + TGS
Sbjct: 156 SYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSV 214
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G + A LK LELGG PFIV DAD++ A + A + N GQ C A R
Sbjct: 215 RAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKR 273
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
V E + F ++ A A +GDP GP + +++ + +++ V GA+L
Sbjct: 274 FIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARL 333
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
GGE++ +G Y TV V DM + E+FGPV +I KD + +N S++GL
Sbjct: 334 LLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGL 393
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
+A +FT + A + L G V+IN + DA + FGG K+SG GRE + L +
Sbjct: 394 SATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN 453
Query: 365 VKAVV 369
V+ V
Sbjct: 454 VQTVW 458
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 352 bits (904), Expect = e-118
Identities = 79/400 (19%), Positives = 137/400 (34%), Gaps = 45/400 (11%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGP---------YHVQTLHEPIGVAGQIIPWNFPLLM 51
T R +A + A D P ++ +G NFPL
Sbjct: 93 RTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAF 152
Query: 52 FA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTA 105
A ALA G +++K P ++ V++ + +A LP + ++ G
Sbjct: 153 SAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRAL 212
Query: 106 GAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA- 163
G AL SH E+ + FTGS G+ + LA + P ELG +P + A KA
Sbjct: 213 GQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKAD 272
Query: 164 -AELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 221
A+ ++ GQ C F + F+E A +L P
Sbjct: 273 LADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSL------IRQQSPSTLLTPG 326
Query: 222 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIF 278
I + + G D G + + +F ++ ++EIF
Sbjct: 327 IRDSYQS---QVVSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIF 379
Query: 279 GPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT--ANTLMRAL--RVGSVWINCF- 333
GP I+ +++ +++ S L A + D + L+ L G + N +
Sbjct: 380 GPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWP 439
Query: 334 --DVFDAAIPFGGYKQS---GQGREKGSYSLSNYLQVKAV 368
A+ GG + G+ ++ +L+ A
Sbjct: 440 TGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAY 479
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 337 bits (867), Expect = e-108
Identities = 113/373 (30%), Positives = 178/373 (47%), Gaps = 15/373 (4%)
Query: 5 LFRYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 62
RYYA K+ G GP GV I PWNFPL +F +V AL
Sbjct: 617 FCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMA 676
Query: 63 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 122
GN++V K AEQTP A LLHEAG+P L +V+G G GAAL +H ++ + FTG
Sbjct: 677 GNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTG 735
Query: 123 STTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
ST + + + A + + P+ E GG + I A ++ A+ + F + GQ C
Sbjct: 736 STEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCS 795
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
A FV E V D+ +E A + +GDP GP ID E +++ +I
Sbjct: 796 ALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM-KT 854
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSN 298
A+L G +G ++ P +F + +E+FGP+ +++Y+ +L+ V++
Sbjct: 855 EARLHFAGPA--PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYRPENLERVLRAIE 910
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKG 355
+ YGL GV + D+ ++ ++VG++++N PFGG SG G + G
Sbjct: 911 RTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGG 970
Query: 356 SYSLSNYLQVKAV 368
+ L+ + + V
Sbjct: 971 PHYLARFATEQTV 983
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 323 bits (829), Expect = e-108
Identities = 73/391 (18%), Positives = 133/391 (34%), Gaps = 34/391 (8%)
Query: 5 LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
F Y ++ G+ D T+ EP+G+ I+P P +K +L N
Sbjct: 74 EFIYNKYKDEQTCGIL-EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRN 132
Query: 65 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
I+ + S +KL+ +A G P ++ + AL H ++ +
Sbjct: 133 GIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILA 192
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TG K AA S+ KP G P ++ E AD+ +A + F+ G C
Sbjct: 193 TGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCA 247
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
+ V + VYD+ E+ + + +++ ID KI+ + +
Sbjct: 248 SEQAVIVVDEVYDEVKERFASHKAHVLSKTDAD-KVRKVLLIDGALNAKIVGQPATAI-- 304
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS--- 297
E G ++ A + V D A E P + + + ++ + ++
Sbjct: 305 ---AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTM 360
Query: 298 -NASQYGLAAGVFTH---NLDTANTLMRALRVGSVWINCFDVFDA---AIPFGGYKQS-- 348
G +G++T+ N D ++ + IN F
Sbjct: 361 VEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL 420
Query: 349 GQGREKGSYSLSN-----YLQVKAVVTALKN 374
G G G+ N + K V +N
Sbjct: 421 GCGSWGGNSISENVGPKHLINKKTVAKRAEN 451
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 309 bits (793), Expect = e-101
Identities = 90/397 (22%), Positives = 139/397 (35%), Gaps = 47/397 (11%)
Query: 2 TTRLFRYYAGWA----------DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 51
TT R +A D PA ++ + P+G NFPL
Sbjct: 127 TTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAVFGASNFPLAF 185
Query: 52 --FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTA 105
ALA G +V+K P + V++ + A G+ PGV +++ G
Sbjct: 186 STAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDV 245
Query: 106 GAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAA 164
G AL H + + FTGS G+ + L A P ELG +P + +A +A
Sbjct: 246 GHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAE 305
Query: 165 ELAH---YALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGP 220
L +L GQ C V E D+F A K GI +
Sbjct: 306 TLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAY 365
Query: 221 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEI 277
+ +F K E + G P +F L +E+
Sbjct: 366 RDGQARFAT---------RNAVKPLLATE---SSGRDASPNLFETTGAQFLADHALGEEV 413
Query: 278 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD--TANTLMRAL--RVGSVWINCF 333
FGP+ +++ E+ + + Q L A + D TA L L + G V +N F
Sbjct: 414 FGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGF 473
Query: 334 ----DVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQ 364
+V D+ + G Y S G+ S+ +L+
Sbjct: 474 PTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 267 bits (684), Expect = 6e-86
Identities = 56/400 (14%), Positives = 120/400 (30%), Gaps = 51/400 (12%)
Query: 7 RYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
++ + ++ + + V + P+GV +IP P +K ++ GN+
Sbjct: 79 KHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNS 138
Query: 66 IVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 121
IV + L +++ E AG P G ++ ++ L H + + T
Sbjct: 139 IVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILAT 198
Query: 122 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 181
G + K AA S+ P G P + A++ +A + + F+ G C +
Sbjct: 199 GGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICAS 253
Query: 182 GSRTFVHESVYDQFVEK--------ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233
V + + + + ++ + P I + + I
Sbjct: 254 EQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313
Query: 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 293
V A++ E T V + ++ E P+ + + E
Sbjct: 314 AGLTVPADARVLIAEE--------------TKVGAKIPYSR-EKLAPILAFYTAETWQEA 358
Query: 294 IQRSNASQY----GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA---------- 339
+ S Y G + + + + V + +N
Sbjct: 359 CELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPAL 418
Query: 340 -IPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 378
+ G S G N ++ + T + +
Sbjct: 419 TLGCGAVGGSSSSDNIGPE---NLFNIRRIATGVLELEDI 455
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 264 bits (676), Expect = 1e-83
Identities = 100/376 (26%), Positives = 162/376 (43%), Gaps = 23/376 (6%)
Query: 6 FRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 64
FR+ A +A ++ + G I P+NF + G GN
Sbjct: 170 FRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAI-GGNLAGAPALMGN 228
Query: 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 124
++ K ++ L++ V ++L EAGLPP ++ V GPT G + S + + FTGS
Sbjct: 229 VVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSV 288
Query: 125 TTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179
T K + + A++ + E GGK+ V ADVD + F GQ C
Sbjct: 289 PTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKC 348
Query: 180 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSG- 237
A SR +V +S++ Q + + VGDP + G ID++ F +I K++
Sbjct: 349 SACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHAR 408
Query: 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQ 295
+ GG+ + GYY++P + I K+EIFGPV ++ Y D E ++
Sbjct: 409 SSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLK 468
Query: 296 RSNA-SQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----PFGGYKQS 348
++ + YGL VF + R LR G+ +IN ++ PFGG + S
Sbjct: 469 LVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKST--GSVVGQQPFGGARAS 526
Query: 349 GQGREKGSYSLSNYLQ 364
G + G +Y+
Sbjct: 527 GTNDKPGGP---HYIL 539
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 1e-81
Identities = 107/331 (32%), Positives = 164/331 (49%), Gaps = 16/331 (4%)
Query: 29 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA 88
PIGV G I P+NFP+++ W A+A GNT +LK +E+TPL + +L +A
Sbjct: 135 AANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA 194
Query: 89 GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 148
GLP GV N+V G + H E+ ++F GS G+ V + ++ NLK V G
Sbjct: 195 GLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGA 252
Query: 149 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 208
K+ IV DA+++ A F + G+ C A + V E + D+F+ K +
Sbjct: 253 KNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKI 312
Query: 209 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVK 267
G+ G+ GP I + ++ L YI G++ GA+L G GY++ PT+F V
Sbjct: 313 GNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVT 372
Query: 268 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 327
+M I KDEIF PV S+++ K+L E I+ +N S++ A +FT N + + G
Sbjct: 373 TEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGM 432
Query: 328 VWINCFDVFDAAIP-------FGGYKQSGQG 351
+ IN +P F G+K S G
Sbjct: 433 LGIN------LGVPAPMAFFPFSGWKSSFFG 457
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 2e-78
Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 20/333 (6%)
Query: 31 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 90
++ +P+G+ I P+NFP ++ W PA+ACGN +LK +E+ P + +++L+ EAGL
Sbjct: 158 SIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGL 217
Query: 91 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 150
P G+LN+V+G A A+ +H ++ ++F GST + V AA N K G K+
Sbjct: 218 PAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKN 275
Query: 151 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT-FVHESVYDQFVEKANALAMKRVVG 209
I+ DAD+D+AA A + + G+ C A S V E ++ ++K + +G
Sbjct: 276 HMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIG 335
Query: 210 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTG 265
GP + E ++I I SG++ GAKL G G++I +F
Sbjct: 336 PYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDD 395
Query: 266 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 325
V DM I K EIFGPV S+++ ++ +E + +YG ++T + D A + +
Sbjct: 396 VTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINI 455
Query: 326 GSVWINCFDVFDAAIP-------FGGYKQSGQG 351
G V +N IP FGG+K S G
Sbjct: 456 GMVGVN------VPIPVPLAYHSFGGWKSSSFG 482
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 3e-76
Identities = 108/362 (29%), Positives = 165/362 (45%), Gaps = 30/362 (8%)
Query: 26 PYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 84
+ EP+GV I WN+P L VG A+A GN +VLK +E + A ++ +
Sbjct: 111 QDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG-AIAAGNAVVLKPSELSENMASLLATI 169
Query: 85 LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 144
+ + L + +++G G L D + +TGST GKI++ AAK +L PVTL
Sbjct: 170 IPQY-LDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTL 225
Query: 145 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 204
ELGGKSP V ++ D+D A + F N GQ C A S+ +Q VE +
Sbjct: 226 ELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVE-----KL 280
Query: 205 KRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKP 260
K+ + + + ++ I + F++++ I G K+ GG A YI P
Sbjct: 281 KKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE-----GQKVAYGGTG-DAATRYIAP 334
Query: 261 TVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320
T+ T V + ++EIFGPV I+ + L+E IQ N + LA +F+ N ++
Sbjct: 335 TILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI 394
Query: 321 RALRVGSVWINCFDVF----DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPA 376
G V N DV ++PFGG SG G G S + ++ L P
Sbjct: 395 AETSSGGVAAN--DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSC---LVRPL 449
Query: 377 WL 378
Sbjct: 450 MN 451
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 216 bits (553), Expect = 2e-66
Identities = 99/339 (29%), Positives = 157/339 (46%), Gaps = 22/339 (6%)
Query: 26 PYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 84
P + EP GV I P+N+P+ L +G A+ GNT ++K +E TP ++ + K+
Sbjct: 121 PSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIG-AIIGGNTCIIKPSETTPETSAVIEKI 179
Query: 85 LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 144
+ EA P + ++ G G + L S D + FTGS GK+V+Q AAK +L PV L
Sbjct: 180 IAEA-FAPEYVAVIQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVL 235
Query: 145 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 204
ELGGK P IV DAD+D+ + F N GQ A +VH SV D +E +
Sbjct: 236 ELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RL 290
Query: 205 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 264
V G + Q ++++ + ++ G + + TV
Sbjct: 291 VERVKTELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKRALSATVVD 346
Query: 265 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRAL 323
GV+ + + +E+FGP+ +L++ + I + N LA VF ++D A ++ +
Sbjct: 347 GVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI 406
Query: 324 RVGSVWINCFDVF----DAAIPFGGYKQSGQGREKGSYS 358
+ G +N V +PFGG SG G G +S
Sbjct: 407 QSGDAQVN--GVMLHAFSPYLPFGGIGASGMGEYHGHFS 443
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.53 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.4 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-91 Score=694.35 Aligned_cols=374 Identities=44% Similarity=0.755 Sum_probs=357.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+.+++++.++..+...+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l 188 (490)
T 2wme_A 109 GADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188 (490)
T ss_dssp HHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHH
Confidence 56889999999999888776666667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++|+|+|++.++++.|++||++|.|.||||+.+|+.+.+.++.+++||+++|||||||+||++|||++
T Consensus 189 ~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~ 268 (490)
T 2wme_A 189 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLD 268 (490)
T ss_dssp HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHH
Confidence 99999999999999999998889999999999999999999999999988766555789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.++++++.++|++++++|
T Consensus 269 ~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 348 (490)
T 2wme_A 269 RAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQK 348 (490)
T ss_dssp HHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||+... .+|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 349 a~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~ 428 (490)
T 2wme_A 349 ARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428 (490)
T ss_dssp CEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred CEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHH
Confidence 99999998643 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCC
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 375 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~ 375 (378)
++++++++|.|+||++....+.+||||+|+||+|+++|.+||++||+.|+|+++..+.
T Consensus 429 ~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g~~ 486 (490)
T 2wme_A 429 RAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDY 486 (490)
T ss_dssp HHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred HHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECCCC
Confidence 9999999999999998777888999999999999999999999999999999997543
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-88 Score=677.45 Aligned_cols=376 Identities=39% Similarity=0.696 Sum_probs=357.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 136 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~ 215 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215 (520)
T ss_dssp HHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHH
Confidence 56789999999988877655433 45678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++.+.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 216 l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl 294 (520)
T 3ed6_A 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADF 294 (520)
T ss_dssp HHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 295 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 374 (520)
T 3ed6_A 295 ELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE 374 (520)
T ss_dssp HHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||+... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 375 Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 454 (520)
T 3ed6_A 375 GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454 (520)
T ss_dssp TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 999999998642 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC--CCCCC
Q 017060 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK--NPAWL 378 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~--~~~~~ 378 (378)
+++++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++.. ...||
T Consensus 455 ~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 455 QRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp HHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred HHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 999999999999999988778899999999999999999999999999999999875 34565
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-88 Score=671.79 Aligned_cols=369 Identities=40% Similarity=0.653 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+.++++..++..+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 114 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 193 (484)
T 3ifg_A 114 AASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALA 193 (484)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 57889999999988776655433 45678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++.+.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 194 l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 194 MAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP-TVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGG-GTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhc-cCCceEEecCCCCeEEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 273 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 352 (484)
T 3ifg_A 273 DAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAK 352 (484)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 353 Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 432 (484)
T 3ifg_A 353 GASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVA 432 (484)
T ss_dssp TCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHH
T ss_pred CCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999865557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++|+|+||+.....+.+||||+|+||+|+++|.+||++|++.|+|++.
T Consensus 433 ~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 433 EALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999777788999999999999999999999999999999864
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-87 Score=669.79 Aligned_cols=370 Identities=29% Similarity=0.465 Sum_probs=354.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|
T Consensus 90 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 169 (484)
T 3ros_A 90 CVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALT 169 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56789999999998877655444566789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|++.+.++ |++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 170 ~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~ 247 (484)
T 3ros_A 170 AKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQ 247 (484)
T ss_dssp HHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEEECTTCCHH
T ss_pred HHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcceeCCCCCHH
Confidence 99999999999999999998777788 9999999999999999999999999987 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 248 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 327 (484)
T 3ros_A 248 VLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAG 327 (484)
T ss_dssp HHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 328 a~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~ 407 (484)
T 3ros_A 328 AKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSA 407 (484)
T ss_dssp CEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHH
T ss_pred CeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 99999998655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++..
T Consensus 408 ~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 408 QIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred hCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999987788999999999999999999999999999999998753
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-87 Score=670.33 Aligned_cols=370 Identities=36% Similarity=0.597 Sum_probs=354.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeee-eeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+...+...++++ +|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 113 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 192 (506)
T 3rh9_A 113 AAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIA 192 (506)
T ss_dssp HHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence 56789999999999888766544556778899 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++|.+.+.++.|++||++|.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 193 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl 271 (506)
T 3rh9_A 193 FFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE-QVKKLALELGGNAPFIVFDDADL 271 (506)
T ss_dssp HHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT-TTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh-cCCceEEecCCCCceEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999999886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 272 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 351 (506)
T 3rh9_A 272 EAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDK 351 (506)
T ss_dssp HHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCC-CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 GAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||...+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 352 Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~ 431 (506)
T 3rh9_A 352 GASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRV 431 (506)
T ss_dssp TCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHH
T ss_pred CCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 9999999986444 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 432 ~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 432 AAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999998888888999999999999999999999999999998874
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-87 Score=671.40 Aligned_cols=371 Identities=43% Similarity=0.719 Sum_probs=355.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 127 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 206 (528)
T 3u4j_A 127 CADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIR 206 (528)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHH
Confidence 56789999999988877665543 46678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 207 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl 285 (528)
T 3u4j_A 207 LAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADL 285 (528)
T ss_dssp HHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHh-cCCceEEecCCCCeeEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 286 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 365 (528)
T 3u4j_A 286 DAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITS 365 (528)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCC-CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 GAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 366 Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 445 (528)
T 3u4j_A 366 GAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQT 445 (528)
T ss_dssp TCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHH
T ss_pred CCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHH
Confidence 9999999986544 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++++|+|+||+++...+.+||||+|+||+|+++|.+||++|++.|+|+++..
T Consensus 446 ~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 446 IRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp HHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred HHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 999999999999988788999999999999999999999999999999998863
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-87 Score=671.05 Aligned_cols=369 Identities=44% Similarity=0.821 Sum_probs=351.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCC----CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++||+.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 141 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~t 220 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLT 220 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHH
Confidence 5788999999998877765443 223357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCCCCcEEEcC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+.+++++|.++|+|+|++|+++|.+.+.++.|++||++|.|.||||+.+|+.|++.++ + ++||+++|+|||||+||++
T Consensus 221 a~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~-~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 221 ALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALS-NVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH-TCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHh-cCCeEEEECCCcCeEEECC
Confidence 9999999999999999999999987788999999999999999999999999999988 6 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|+|+++++||+++.+++++++++|++
T Consensus 300 dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~ 379 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQR 379 (517)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHHHcCCCCceEEEecCCHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++|+++++||+.....|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.+
T Consensus 380 a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~ 459 (517)
T 2o2p_A 380 GVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459 (517)
T ss_dssp HHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHH
T ss_pred HHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHH
Confidence 99999999999986544699999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++++|+|+||+++...+.+||||+|+||+|+++|.+||++|++.|+|+++
T Consensus 460 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 460 KALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 999999999999999999877778999999999999999999999999999999876
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-86 Score=665.70 Aligned_cols=372 Identities=60% Similarity=1.054 Sum_probs=353.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 126 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 205 (501)
T 1bxs_A 126 CIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHM 205 (501)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHH
Confidence 46789999999988877654444455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|.+.+.++.|++||++|.|.||||+.+|+.|++.++..++||+++|+|||||+||++|||++
T Consensus 206 ~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~ 285 (501)
T 1bxs_A 206 GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLD 285 (501)
T ss_dssp HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHH
Confidence 99999999999999999997788899999999999999999999999999998823789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 286 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 365 (501)
T 1bxs_A 286 NAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 365 (501)
T ss_dssp HHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||+.....|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 366 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 445 (501)
T 1bxs_A 366 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 445 (501)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHH
Confidence 99999997644468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|+|.++..
T Consensus 446 ~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 446 ALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred hcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 9999999999987777889999999999999999999999999999988753
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-86 Score=667.05 Aligned_cols=376 Identities=43% Similarity=0.788 Sum_probs=355.4
Q ss_pred HHHHHHHHHHHHhhhcCccC-C---CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTA-P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++.+++++.++.. + ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 193 (503)
T 3iwj_A 114 VAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLT 193 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHH
Confidence 56789999999988766541 1 1235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.++|+|+|++++++|.+.+.++.|+.||++|.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 194 ~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-~l~~v~lElGGk~p~iV~~d 272 (503)
T 3iwj_A 194 CLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFED 272 (503)
T ss_dssp HHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGG-GTCCEEEECCCCEEEEECSS
T ss_pred HHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhc-CCCCEEEECCCCCceEEcCC
Confidence 99999999999999999999999888899999999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 273 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 352 (503)
T 3iwj_A 273 VDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNA 352 (503)
T ss_dssp SCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 238 VDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 353 ~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 432 (503)
T 3iwj_A 353 KSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLER 432 (503)
T ss_dssp HHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHH
T ss_pred HHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 999999999998654 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC--CCCCC
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK--NPAWL 378 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~--~~~~~ 378 (378)
++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+|.++.. .+.||
T Consensus 433 a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 433 CERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred HHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 9999999999999999987778899999999999999999999999999999998864 44565
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-87 Score=667.84 Aligned_cols=368 Identities=39% Similarity=0.670 Sum_probs=351.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+.++++..++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 134 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~ 213 (504)
T 3ek1_A 134 AASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALA 213 (504)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 56789999999988776654432 35678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++.+.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 214 l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 214 LGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP-TIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh-hcCCeEecCCCCCeeEEcCCCCH
Confidence 99999999999999999998888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 293 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 372 (504)
T 3ek1_A 293 DAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSK 372 (504)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||+. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 373 Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 373 GAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 9999999975 35899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++|+|+||+.....+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 451 ~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 451 EALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 9999999999998777789999999999999999999999999999998875
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-86 Score=665.88 Aligned_cols=372 Identities=62% Similarity=1.055 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+++++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 125 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 204 (500)
T 1o04_A 125 VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYV 204 (500)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHH
Confidence 46789999999888777654443455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|.+.+.++.|++||++|.|.||||+.+|+.|++.++..++||+++|+|||||+||++|||++
T Consensus 205 ~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~ 284 (500)
T 1o04_A 205 ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMD 284 (500)
T ss_dssp HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHH
Confidence 99999999999999999997788999999999999999999999999999998823789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 285 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 364 (500)
T 1o04_A 285 WAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 364 (500)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||+.....|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 365 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 444 (500)
T 1o04_A 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 444 (500)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 99999997643468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|.++..
T Consensus 445 ~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 445 ALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred hCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 9999999999987777889999999999999999999999999999988753
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-87 Score=666.14 Aligned_cols=369 Identities=34% Similarity=0.623 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 127 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~ 206 (498)
T 4f3x_A 127 IIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206 (498)
T ss_dssp HHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHH
Confidence 5678999999998877665432 245678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++ +|+|++|+++|++.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 207 l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dADl 284 (498)
T 4f3x_A 207 LARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADL 284 (498)
T ss_dssp HHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCceeecCCCCCcEEECCCCCH
Confidence 99999999 99999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 285 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 285 EAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-eEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 241 GA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 99 99999986555799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 445 a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 99999999999998877789999999999999999999999999999998763
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-86 Score=664.40 Aligned_cols=372 Identities=37% Similarity=0.603 Sum_probs=352.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 193 (497)
T 3k2w_A 114 TATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTE 193 (497)
T ss_dssp HHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 5678999999998887765443 345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 194 l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 194 LGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE-YMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTT-TTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhh-cCCCeEEEcCCCCceEEcCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 273 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 352 (497)
T 3k2w_A 273 DKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQ 352 (497)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcc--cCC--CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 241 GAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||+. .+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 353 Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 432 (497)
T 3k2w_A 353 GATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANI 432 (497)
T ss_dssp HCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHH
T ss_pred CCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Confidence 9999999973 222 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 017060 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
+++++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++...
T Consensus 433 ~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~ 490 (497)
T 3k2w_A 433 NQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEAE 490 (497)
T ss_dssp HHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEccc
Confidence 9999999999999999887788999999999999999999999999999999998754
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-86 Score=661.68 Aligned_cols=370 Identities=42% Similarity=0.728 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 128 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 207 (515)
T 2d4e_A 128 AAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATK 207 (515)
T ss_dssp HHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHH
Confidence 5678999999998887765443 345567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++|.+.++++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 208 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~-~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 208 LAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-cCCceEecCCCcCeEEEcCCCCH
Confidence 99999999999999999999777889999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 287 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 366 (515)
T 2d4e_A 287 ERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKRE 366 (515)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC--------CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCC
Q 017060 241 GAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 312 (378)
Q Consensus 241 ga~~~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 312 (378)
|+++++||+... ..|+|++|||+.+ +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 367 Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 445 (515)
T 2d4e_A 367 GARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRD 445 (515)
T ss_dssp TCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSB
T ss_pred CCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCC
Confidence 999999997543 2689999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 313 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 313 ~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+|+++|++.|+|.++..
T Consensus 446 ~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 446 LERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp HHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred HHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcCC
Confidence 9999999999999999999987777899999999999999999999999999999998753
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-86 Score=662.88 Aligned_cols=368 Identities=39% Similarity=0.662 Sum_probs=350.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 113 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 192 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANAL 192 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHH
Confidence 56789999999988877654433344678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++| +.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 193 ~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-~l~pv~lELGGk~p~iV~~dADl~ 270 (495)
T 3b4w_A 193 AEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLA 270 (495)
T ss_dssp HHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTCCHH
T ss_pred HHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCceeecCCCcceEEECCCCCHH
Confidence 9999999999999999999 88899999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 271 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 350 (495)
T 3b4w_A 271 AAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEG 350 (495)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 242 AKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 242 a~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+++++||+... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 351 a~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 430 (495)
T 3b4w_A 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKI 430 (495)
T ss_dssp CEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHH
T ss_pred CEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHH
Confidence 99999997643 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|+|+||+++ ..+.+||||+|.||+|+++|.+||++|++.|+|.++.
T Consensus 431 ~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 431 SQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999987 7789999999999999999999999999999998875
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-86 Score=657.87 Aligned_cols=369 Identities=38% Similarity=0.667 Sum_probs=351.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++.+..++..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 111 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 190 (481)
T 3jz4_A 111 AASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190 (481)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 5678899999888776655443 345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 191 l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 191 LAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTT-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeEEEcCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 270 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 349 (481)
T 3jz4_A 270 DKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEK 349 (481)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017060 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 350 Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 429 (481)
T 3jz4_A 350 GARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVG 429 (481)
T ss_dssp TCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 99999999865456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++|.|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++
T Consensus 430 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 430 EALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999877788999999999999999999999999999999875
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-86 Score=662.98 Aligned_cols=369 Identities=40% Similarity=0.748 Sum_probs=350.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 122 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l 201 (503)
T 1a4s_A 122 AWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVIL 201 (503)
T ss_dssp HHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56789999999988776554433344678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|.+ ++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 202 ~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 202 AEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCceEEecCCcCeEEECCCCCHH
Confidence 999999999999999999977 889999999999999999999999999999886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 280 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 359 (503)
T 1a4s_A 280 NAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEG 359 (503)
T ss_dssp HHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCccc--C----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 242 AKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 242 a~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++||+.. . ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 360 a~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (503)
T 1a4s_A 360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439 (503)
T ss_dssp CEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred CEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 9999999754 2 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|.++.
T Consensus 440 a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 440 AHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999998777788999999999999999999999999999998864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-86 Score=664.50 Aligned_cols=368 Identities=41% Similarity=0.721 Sum_probs=351.2
Q ss_pred HHHHHHHHHHHHhh----hcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++.++++ +.++..+...+. .+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 192 (517)
T 3r31_A 114 PTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLG 192 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSH
T ss_pred HHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHH
Confidence 57889999999988 777665544455 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.++|+|+|++++++| +.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lElGGk~p~IV~~d 270 (517)
T 3r31_A 193 ALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG-HLKHVTMELGGKSPMIVFDD 270 (517)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhc-CCCcEEEEcCCcCeEEEecC
Confidence 99999999999999999999999 78899999999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 271 ADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 271 ADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp SCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 238 VDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
+++|+++++||...+ ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 999999999993121 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++++++|+|+||+.+...+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 9999999999999999998878899999999999999999999999999999998875
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=662.57 Aligned_cols=370 Identities=36% Similarity=0.577 Sum_probs=351.2
Q ss_pred HHHHHHHHHHH-HhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+ ++...++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 138 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 138 AIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 57889999998 66677766654456778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCC------CCcceeecCCCCcEEE
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN------LKPVTLELGGKSPFIV 154 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~------~~~v~~e~gG~~~~iV 154 (378)
|++++.++|+|+|++++++|++.++++.|++||++|.|.||||+.+|+.|++.+++ + +||+++|+|||||+||
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~~~~~~~lkpv~lELGGk~p~IV 296 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV-VRPGQNHLKRVIVEMGGKDTVVV 296 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS-CCTTCCSCCEEEEECCCCCEEEE
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh-ccccccccccEEEecCCCCceEE
Confidence 99999999999999999999888899999999999999999999999999999886 5 8999999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|
T Consensus 297 ~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 297 DRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 377 ~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 455 (538)
T 3qan_A 377 EIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455 (538)
T ss_dssp HHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHH
Confidence 9999999 999999875447999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEc-CCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeCC
Q 017060 315 TANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN-~~~~~-~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++++++|+|+|| ++... .+.+||||+|+||+| +++|.+||++|++.|+|+++..
T Consensus 456 ~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 456 HIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred HHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 99999999999999999 55544 788999999999999 9999999999999999998863
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-85 Score=655.65 Aligned_cols=369 Identities=35% Similarity=0.641 Sum_probs=349.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 108 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 187 (479)
T 2imp_A 108 TADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187 (479)
T ss_dssp HHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 46789999998887776653322 34567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
++++|.++|+|+|++++++|++.++++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 188 l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 188 FAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEEcCCcCeEEECCCCCH
Confidence 99999999999999999999777789999999999999999999999999999886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCC-CCccccccCCHHHHHHHHHHHHHhhh
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-GGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.| +++++||+++.+++++++++|+++++
T Consensus 267 ~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 346 (479)
T 2imp_A 267 ELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVE 346 (479)
T ss_dssp HHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017060 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||+..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 347 ~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~ 426 (479)
T 2imp_A 347 EGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKA 426 (479)
T ss_dssp TTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHH
T ss_pred CCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 99999999975333689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 427 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 427 IKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999876678999999999999999999999999999999764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-85 Score=657.38 Aligned_cols=367 Identities=37% Similarity=0.661 Sum_probs=348.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 125 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 204 (495)
T 1wnd_A 125 IVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204 (495)
T ss_dssp HHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHH
Confidence 46789999999888776654422 34467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++ +|+|++++++|.+.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 205 l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl 282 (495)
T 1wnd_A 205 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADI 282 (495)
T ss_dssp HHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh-cCCccccccCCCCeEEECCcCCH
Confidence 99999999 99999999999777889999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 283 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 362 (495)
T 1wnd_A 283 EAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 362 (495)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CeEeeCCc-ccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 241 G-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 241 g-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
| +++++||+ ... .|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+++++
T Consensus 363 G~a~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 441 (495)
T 1wnd_A 363 GHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 441 (495)
T ss_dssp SSCEEEECCSBCSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHH
T ss_pred CCeEEEECCcccCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 9 99999997 432 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++|+|+||+++...+.+||||+|.||+|+++|.+||++|++.|+|+++
T Consensus 442 ~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 442 VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999877778999999999999999999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-86 Score=659.65 Aligned_cols=365 Identities=37% Similarity=0.532 Sum_probs=345.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC--C----CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCCh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 75 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~ 75 (378)
+++.++|++.+++++.++..+.. . +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 113 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp 192 (505)
T 3prl_A 113 TADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGS 192 (505)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTH
T ss_pred HHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 56789999999988776543321 1 45678899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+++.+|++++.++|+|+|++++++|.+.++++.|++||++|.|.||||+.+|+.|++.++ ++|+++|+|||||+||+
T Consensus 193 ~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~ 269 (505)
T 3prl_A 193 LSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVL 269 (505)
T ss_dssp HHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEEC
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccC
Confidence 999999999999999999999999988889999999999999999999999999998865 78999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|. +++++||+++.+++++++++|+
T Consensus 270 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~ 348 (505)
T 3prl_A 270 DDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLID 348 (505)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++|+++++||+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 349 ~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 425 (505)
T 3prl_A 349 DALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDR 425 (505)
T ss_dssp HHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHH
T ss_pred HHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHH
Confidence 999999999999974 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 316 ANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++++++++|+|+||++.. ..+.+||||+|+||+|+++|.+|+++|++.|+|+++..
T Consensus 426 a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 426 AINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp HHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCC
Confidence 99999999999999999865 46889999999999999999999999999999998864
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-85 Score=649.02 Aligned_cols=369 Identities=31% Similarity=0.497 Sum_probs=350.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.+.......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 93 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l 172 (462)
T 3etf_A 93 SAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMI 172 (462)
T ss_dssp HHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 46789999999988776653333456688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++ +.+.+..|++||+++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 173 ~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 173 ARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCccEECCCCCHH
Confidence 9999999999999999998 45778899999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++.++++++++++++++++|
T Consensus 251 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 330 (462)
T 3etf_A 251 LAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEG 330 (462)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 331 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~ 410 (462)
T 3etf_A 331 ARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAA 410 (462)
T ss_dssp CEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHH
T ss_pred CEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999998655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+|.++.
T Consensus 411 ~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 411 RLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred hCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999999998877889999999999999999999999999999998763
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-84 Score=650.79 Aligned_cols=364 Identities=37% Similarity=0.606 Sum_probs=340.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeee-eeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++...+........ ..+...++. ++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 128 ~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 206 (497)
T 3i44_A 128 GSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAML 206 (497)
T ss_dssp HHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHH
Confidence 456778888776554332221 124456788 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++++.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||
T Consensus 207 l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD- 284 (497)
T 3i44_A 207 FAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD- 284 (497)
T ss_dssp HHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-
T ss_pred HHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-
Confidence 99999999999999999999888899999999999999999999999999999887 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 285 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (497)
T 3i44_A 285 IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDE 364 (497)
T ss_dssp TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCc-ccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 241 GAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 241 ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 365 Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 444 (497)
T 3i44_A 365 GATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCR 444 (497)
T ss_dssp TCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred CCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHH
Confidence 999999994 322 26999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|+|+||. ....+.+||||+|.||+|+++|.+||++|++.|+|+
T Consensus 445 ~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 445 RIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 999999999999995 555688999999999999999999999999999885
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-85 Score=657.33 Aligned_cols=371 Identities=28% Similarity=0.454 Sum_probs=348.4
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.++..+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 128 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~ 207 (521)
T 4e4g_A 128 GLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIR 207 (521)
T ss_dssp HHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 567899999988877765433 2235568899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++|+ .+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 208 l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl 285 (521)
T 4e4g_A 208 LAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADL 285 (521)
T ss_dssp HHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCH
Confidence 999999999999999999994 5567999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++++
T Consensus 286 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 286 DQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCccc----CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 240 GGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 240 ~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+|+++++||... ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 999999999752 2468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEeCCC
Q 017060 316 ANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
++++++++++|.|+||++... .+.+||||+|.||+| +++|.+||++|++.|+|+++++.
T Consensus 446 a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~~ 507 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWPS 507 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECCCC
T ss_pred HHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEecCc
Confidence 999999999999999997654 478999999999999 79999999999999999998754
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-85 Score=653.56 Aligned_cols=369 Identities=38% Similarity=0.606 Sum_probs=350.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++++..++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 112 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 191 (487)
T 2w8n_A 112 SAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALA 191 (487)
T ss_dssp HHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 5678999999998877765443 245567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEe---CCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 81 VSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~---~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+++++.++|+|+|++|+++ |.+.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 192 l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 192 LAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN-SVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT-TTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEecCCCCeEEECCC
Confidence 9999999999999999999 7667789999999999999999999999999999886 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhh-cccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.+++++ +++|+|.|+++++||+++.+++++++++|++
T Consensus 271 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 350 (487)
T 2w8n_A 271 ANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350 (487)
T ss_dssp SCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCe-eeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 237 GVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
++++|+++++||+... .|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 351 a~~~Ga~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 351 AVSKGATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHTTTCEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHCCCEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 9999999999997642 588 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|++.++.
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~~ 486 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGG 486 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEECC
T ss_pred HHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEec
Confidence 999999999999999998777788999999999999999999999999999998753
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-84 Score=649.48 Aligned_cols=362 Identities=33% Similarity=0.584 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+.. +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 176 (486)
T 3pqa_A 98 SIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIEL 176 (486)
T ss_dssp HHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHH
Confidence 46789999999998877665543 56789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc----CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 82 SKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 82 ~~~l~~a----glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
++++.++ |+|+|++++++|++.++++.|++||++|.|.||||+.+|+.|++.++ +||+++|+|||||+||++|
T Consensus 177 ~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~d 253 (486)
T 3pqa_A 177 AKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKD 253 (486)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCC
Confidence 9999999 99999999999988888999999999999999999999999998765 7899999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|+|+++++||+++.+++++++++|+++
T Consensus 254 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 333 (486)
T 3pqa_A 254 ADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKA 333 (486)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.++++
T Consensus 334 ~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~ 408 (486)
T 3pqa_A 334 IDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSL 408 (486)
T ss_dssp HHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHH
T ss_pred HHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHH
Confidence 9999999999975 5899999999 9999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 318 TLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|+|+||+++.. .+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 409 ~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 409 KFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 9999999999999998653 458999999999999999999999999999999885
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-84 Score=651.48 Aligned_cols=364 Identities=31% Similarity=0.488 Sum_probs=345.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CC--CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++.+++++.++..+. .. +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 119 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 119 AVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 5678899999988877665433 22 336789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.++++++.++|+|+|++++++|.+ ++++.|++||++|.|.||||+.+|+.|++.++ ++|+++|+|||||+||++
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~ 274 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLE 274 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECC
Confidence 99999999999999999999999976 88999999999999999999999999998876 789999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++
T Consensus 275 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~ 354 (501)
T 1uxt_A 275 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 354 (501)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCC-eeeeceeeccCC---CcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCC
Q 017060 237 GVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 312 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 312 (378)
++++|+++++||+. .| +|++|||+.+++ ++|.+++||+||||++|++|+|+|||++++|+++|||++||||+|
T Consensus 355 a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 431 (501)
T 1uxt_A 355 AVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRD 431 (501)
T ss_dssp HHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCC
T ss_pred HHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCC
Confidence 99999999999975 57 999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcceeEEEEcCC-CCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 313 LDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 313 ~~~~~~~~~~l~~g~v~vN~~-~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+|+++|++.|+++++.
T Consensus 432 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 432 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp HHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred HHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 999999999999999999998 556788999999999999999999999999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-84 Score=649.96 Aligned_cols=373 Identities=34% Similarity=0.562 Sum_probs=332.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCC--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH-
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA- 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~- 78 (378)
+++.++|++.++++..+ ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 114 ~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 114 AGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 46778899988877665 4332 2356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-CCCcceeecCCCCcEEEcCC
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-~~~~v~~e~gG~~~~iV~~d 157 (378)
.++.+++.++|+|+|++++++|++.+.++.|++||++|.|.||||+.+|+.|++.+++. +++|+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 99999999999999999999997788999999999999999999999999999987741 57999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 273 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 352 (508)
T 3r64_A 273 ADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELA 352 (508)
T ss_dssp SCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.++++
T Consensus 353 ~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 353 KKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 9999999999975 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC-----CCCCCC
Q 017060 318 TLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL-----KNPAWL 378 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~-----~~~~~~ 378 (378)
++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+|+++|++.|+|+++. ..+.||
T Consensus 430 ~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp HHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEECCSTTCCCC---
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccchhcchhhc
Confidence 9999999999999998654 688999999999999999999999999999999885 467775
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-83 Score=646.95 Aligned_cols=368 Identities=34% Similarity=0.553 Sum_probs=344.7
Q ss_pred HHHHHHHHHHHHhhhcCccCC--CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++||+.+++++.+...+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 138 AIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 567899999999888776532 223456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEE
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV 154 (378)
.+++++.++|+|+|++++++|.+.++++.|++||++|.|+||||+.+|+.|++.+++ .+++|+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999999999999999777889999999999999999999999999998871 378999999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+| ++++++||+++.+++++++++|
T Consensus 298 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 377 ~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~ 455 (516)
T 1uzb_A 377 EIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKRE 455 (516)
T ss_dssp HHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHH
T ss_pred HHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 9999998 899999753346899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 017060 315 TANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++++|.|+||+... ..+.+||||+|.||+| +++|.+++++|++.|+|+++
T Consensus 456 ~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 456 HLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999998643 3578999999999999 57999999999999999875
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-84 Score=645.68 Aligned_cols=369 Identities=29% Similarity=0.507 Sum_probs=344.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 123 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 202 (500)
T 2j6l_A 123 YVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202 (500)
T ss_dssp HHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHH
Confidence 46788999998887776654432 34456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----HcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 81 VSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 81 l~~~l~----~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+++++. ++|+|+|++++++| +.++++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 203 l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~-~l~~v~lELGGk~p~iV~~ 280 (500)
T 2j6l_A 203 VTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE-RFGRSLLELGGNNAIIAFE 280 (500)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhcc-CCCceEEEcCCCCceEECC
Confidence 888866 46999999999999 77889999999999999999999999999999887 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++
T Consensus 281 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 281 DADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp TCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||+..+..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 99999999999976444689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--HHcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 317 NTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~--~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+++++.
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred HHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEeC
Confidence 9999 679999999998654 3467899999999999999999999999999998863
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-84 Score=644.46 Aligned_cols=364 Identities=35% Similarity=0.522 Sum_probs=343.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CC----cce-eeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCCh
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 75 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~ 75 (378)
+++.++|++.+++++.++..+.. .+ ... +..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 104 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp 183 (475)
T 1euh_A 104 TAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183 (475)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcCh
Confidence 56889999999888766543322 23 356 8999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017060 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+++.+++++|.++|+|+|++++++|.+.+.++.|++||++|.|.||||+++|+.|++.++ ++|+++|+|||||+||+
T Consensus 184 ~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEEC
Confidence 999999999999999999999999977778999999999999999999999999998765 78999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.| ++++||+++.+++++++++++
T Consensus 261 ~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++|+++++||+. .|+|++|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.++
T Consensus 340 ~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~ 416 (475)
T 1euh_A 340 DANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPR 416 (475)
T ss_dssp HHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHH
T ss_pred HHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHH
Confidence 999999999999975 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcC-CCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~-~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|.|+||+ +....+.+||||+|+||+|+++|.+|+++|++.|++++++
T Consensus 417 ~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 417 AFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence 99999999999999999 6555788999999999999999999999999999998874
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-84 Score=645.10 Aligned_cols=368 Identities=32% Similarity=0.522 Sum_probs=327.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH-
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA- 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~- 78 (378)
+++.++|++.+++++.++..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 108 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 108 TIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 5678999999998877766543 2356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.++.++|.++|+|+|+++++++++.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dA 266 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR-AFKRMALELGGNNPFAVLSDA 266 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH-HTCEEEEEECCCEEEEECTTS
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh-hccchhhhcCCCCceEEcCCC
Confidence 9999999999999999999999877899999999999999999999999999999887 789999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++..+++++++++++++
T Consensus 267 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 267 DVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp CHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++||++||||+|.+++++
T Consensus 347 ~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 423 (485)
T 4dng_A 347 TDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423 (485)
T ss_dssp HTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 999999999975 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 319 LMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.|++.+++.
T Consensus 424 ~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 479 (485)
T 4dng_A 424 FALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQ 479 (485)
T ss_dssp HHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC-
T ss_pred HHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecC
Confidence 999999999999998654 6889999999999999999999999999999998864
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-83 Score=641.47 Aligned_cols=373 Identities=31% Similarity=0.489 Sum_probs=348.3
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++...++..+ ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 107 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 186 (486)
T 1t90_A 107 GIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEK 186 (486)
T ss_dssp HHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 467789998877777665433 1234567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++| +.+.+..|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 187 l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl 264 (486)
T 1t90_A 187 LVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANL 264 (486)
T ss_dssp HHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc-cCCcEEeccCCCCcEEECCCCCH
Confidence 99999999999999999998 56789999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCe-EEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++| +|||++ +|+|+++|.++++++++|+|.++++++||+++..++++++++++++++
T Consensus 265 ~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 265 EDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 240 GGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 240 ~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 9999999997432 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEeCCCCCC
Q 017060 319 LMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTALKNPAW 377 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~~~~~~~ 377 (378)
+++++++|+|+||+.... .+.+||||+|+||+| +++|.+|+++|++.|++..++.+|..
T Consensus 424 ~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~ 485 (486)
T 1t90_A 424 FRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPDF 485 (486)
T ss_dssp HHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCCCCC
T ss_pred HHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCCCCC
Confidence 999999999999986433 578999999999999 89999999999999999999877753
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-83 Score=641.73 Aligned_cols=363 Identities=39% Similarity=0.676 Sum_probs=321.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++++++++.++.. +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 110 ~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 185 (478)
T 3ty7_A 110 GLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVIL 185 (478)
T ss_dssp HHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHH
Confidence 46788999999888766432 23578999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|+++++++++.++++.|+.||++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 186 ~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~ 264 (478)
T 3ty7_A 186 AEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIK 264 (478)
T ss_dssp HHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT-TTCEEECCCCCCCEEEECTTSCHH
T ss_pred HHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh-cCCceEEecCCCCCcccCCCCCHH
Confidence 9999999999999999999888899999999999999999999999999998876 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 265 ~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 344 (478)
T 3ty7_A 265 EAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEG 344 (478)
T ss_dssp HHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCccc-C--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 242 AKLETGGERL-G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 242 a~~~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 345 a~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 424 (478)
T 3ty7_A 345 AELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHK 424 (478)
T ss_dssp CEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHH
T ss_pred CEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 9999999432 2 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017060 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++++|+|+||+ +...+.+||||+|+||+|+++|.+||++||+.|+|+.
T Consensus 425 ~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 425 VARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 99999999999999 6667889999999999999999999999999999974
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-82 Score=638.64 Aligned_cols=375 Identities=28% Similarity=0.419 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
++++++|++.+++++.+...... .+...+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.+
T Consensus 166 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~ 244 (563)
T 4e3x_A 166 LIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYA 244 (563)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHH
Confidence 57899999999999887543322 234457778889999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCC------cceeecCCCCcEEE
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFIV 154 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~------~v~~e~gG~~~~iV 154 (378)
++++|.++|+|+|++|+|+|++.++++.|++||+++.|.||||+.+|+.|++.+++ +++ |+++|+|||||+||
T Consensus 245 l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p~IV 323 (563)
T 4e3x_A 245 VYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNFHFV 323 (563)
T ss_dssp HHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCccccCCceeccCCCCCceee
Confidence 99999999999999999999888899999999999999999999999999999887 566 49999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCC-CCCCccccccCCHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+| .|+++++||+++.+++++++++
T Consensus 324 ~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~ 403 (563)
T 4e3x_A 324 HSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKW 403 (563)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHhhh-CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHH-HcCCCCceEEEe
Q 017060 234 IRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGVF 309 (378)
Q Consensus 234 i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~ 309 (378)
|+++++ +|+++++||+.+...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++||
T Consensus 404 i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~ 483 (563)
T 4e3x_A 404 LEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVF 483 (563)
T ss_dssp HHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEE
T ss_pred HHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEE
Confidence 999996 89999999987666799999999999999999999999999999999996 79999999 789999999999
Q ss_pred cCCHHHHHHHHHHcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC--CCCCCC
Q 017060 310 THNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL--KNPAWL 378 (378)
Q Consensus 310 s~d~~~~~~~~~~l~--~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~--~~~~~~ 378 (378)
|+|.+++++++++++ +|+|+||+.+.. .+.+||||+|.||+| +++|.++|++|++.|+|..+. ++++|+
T Consensus 484 t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~~~~~~~y 559 (563)
T 4e3x_A 484 AQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRY 559 (563)
T ss_dssp CSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECSCCCCSSC
T ss_pred eCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCcCCCcccC
Confidence 999999999999975 999999997643 578999999999998 899999999999999999886 344453
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-82 Score=630.55 Aligned_cols=373 Identities=30% Similarity=0.452 Sum_probs=346.1
Q ss_pred HHHHHHHHHHHHhhhcCcc-CC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLT-AP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++|++.++.++.... .. ...+......++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 91 FLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 4567888888887765433 22 223455677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcC
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dad 159 (378)
.+.+++.++|+|+|+++++++ +.+.+..|..| +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dAd 246 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELGGKDPAIVLESAN 246 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECCCCEEEEECTTSC
T ss_pred HHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCCCcCccccCchhh
Confidence 999999999999999999998 56778888876 8999999999999999999887 7899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017060 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++|+|.++++++||+++..+++++.++++++++
T Consensus 247 l~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 326 (474)
T 4h7n_A 247 LELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVE 326 (474)
T ss_dssp HHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 240 GGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 240 ~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+|++++.||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 327 ~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~ 406 (474)
T 4h7n_A 327 KGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALK 406 (474)
T ss_dssp TTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHH
T ss_pred hCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHH
Confidence 9999999998643 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC---CCCCCC
Q 017060 319 LMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL---KNPAWL 378 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~---~~~~~~ 378 (378)
+++++++|+|+||+... ..+..||||+|.||+| +++|.+|+++|++.|+|.++. ..|+|+
T Consensus 407 ~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 407 VARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp HHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred HHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999998754 3578999999999998 788999999999999999985 578896
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-81 Score=624.21 Aligned_cols=359 Identities=29% Similarity=0.424 Sum_probs=329.4
Q ss_pred HHHHHHHHHHHhhhcCccCC----CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 3 TRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
++.++|++.....+...... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~ 163 (469)
T 3sza_A 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMA 163 (469)
T ss_dssp HHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHH
T ss_pred HHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 45567777665554332211 11244678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017060 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.++++++.++ +|+|++++++|. .+....|+.| ++|.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++||
T Consensus 164 ~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dA 239 (469)
T 3sza_A 164 SLLATIIPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNC 239 (469)
T ss_dssp HHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCC
Confidence 9999999998 999999999994 4455667777 89999999999999999999887 799999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++ .|+|.++++++||+++.+++++++++|
T Consensus 240 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i---- 314 (469)
T 3sza_A 240 DLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI---- 314 (469)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH----
Confidence 999999999999999999999999999999999999999999999988 599999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 315 -~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~ 392 (469)
T 3sza_A 315 -EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKK 392 (469)
T ss_dssp -TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHH
T ss_pred -cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHH
Confidence 589999999864 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 319 LMRALRVGSVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~--~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++|.|+||+.. ...+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 393 ~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 393 MIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp HHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred HHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 9999999999999975 34688999999999999999999999999999998874
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-80 Score=656.96 Aligned_cols=370 Identities=32% Similarity=0.532 Sum_probs=349.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
++++++||+.+++++.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 632 aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~ 711 (1026)
T 4f9i_A 632 AIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711 (1026)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHH
Confidence 5789999999999887655332 356678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEEc
Q 017060 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV~ 155 (378)
++++|.++|+|+|++|+|+|++.++++.|++||+++.|.||||+.+|+.|.+.++. ++++|+++|+|||||+||+
T Consensus 712 l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~ 791 (1026)
T 4f9i_A 712 LVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIID 791 (1026)
T ss_dssp HHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEEC
T ss_pred HHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEEC
Confidence 99999999999999999999888899999999999999999999999999998873 3679999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017060 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+
T Consensus 792 ~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~ 871 (1026)
T 4f9i_A 792 DDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAE 871 (1026)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++| ++++||..+...|+|+.|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 872 ~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~ 950 (1026)
T 4f9i_A 872 IGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEH 950 (1026)
T ss_dssp HHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHH
T ss_pred HHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHH
Confidence 999998 9999997655459999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||+.+.. .+.+||||+|.||+| +++|.++|++|++.|+|+++.
T Consensus 951 a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 951 LAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 999999999999999997653 478999999999999 578999999999999999885
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-79 Score=610.36 Aligned_cols=357 Identities=28% Similarity=0.469 Sum_probs=331.1
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++++.+.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 93 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 172 (457)
T 3lns_A 93 VLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPET 172 (457)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHH
T ss_pred HHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 4578899998888765432 221 134568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.++ +|+|++|+++| +.+.+..|++ +++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 173 ~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~d 248 (457)
T 3lns_A 173 SAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPD 248 (457)
T ss_dssp HHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCCCCCeECCC
Confidence 99999999999 99999999999 6788899998 789999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.+++++++ |.++ ++||+++.+++++++++|+++
T Consensus 249 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a 323 (457)
T 3lns_A 249 ADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT 323 (457)
T ss_dssp CCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987 6666 999999999999999999986
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHc-CCCCceEEEecCCHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~s~d~~~~ 316 (378)
. +++++||.... .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+++
T Consensus 324 ~---~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a 399 (457)
T 3lns_A 324 Q---GQVLVGSQADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVA 399 (457)
T ss_dssp C---SEEEECCCEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHH
T ss_pred C---CeEEeCCccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHH
Confidence 3 59999997533 6899999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 317 NTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 400 ~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 400 KGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999743 468899999999999999999999999999999764
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-80 Score=616.77 Aligned_cols=362 Identities=28% Similarity=0.388 Sum_probs=338.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++.+.++..+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 185 (490)
T 3ju8_A 106 MVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELT 185 (490)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHH
Confidence 46788999998888777654322334567789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcc-eeecCCCCcEEEcCCcCH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV-TLELGGKSPFIVCEDADV 160 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v-~~e~gG~~~~iV~~dadl 160 (378)
++++.++|+|+|+++++++ +.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+ ++|+|||||+||++|||+
T Consensus 186 ~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 186 LKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-QPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-CTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-cCCCcEEeecCCCCeEEECCCCCH
Confidence 9999999999999999999 67889999999999999999999999999998886 78898 799999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccc-hHHHHHHHHHHHhhcccCC-CCCCCccccccCCHHHHHHHHHHHHHhh
Q 017060 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
+.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|.++++++++|+ |.|+++++||+++.+++++++++|++++
T Consensus 264 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~ 343 (490)
T 3ju8_A 264 DAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLI 343 (490)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 9999999999999999999 9999999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017060 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+++++
T Consensus 344 ~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~ 422 (490)
T 3ju8_A 344 GKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQ 422 (490)
T ss_dssp HTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHH
Confidence 99999999997655679999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 319 LMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++|+|+||++... .+.+||||+|.||++ ++++|++.|+|+++.
T Consensus 423 ~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 423 FLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999997653 578999999999974 589999999998774
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-79 Score=614.45 Aligned_cols=366 Identities=25% Similarity=0.350 Sum_probs=329.1
Q ss_pred HHHHHHHHHHHHhhhcCc-------cCCCC-CC-cceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCC
Q 017060 2 TTRLFRYYAGWADKIQGL-------TAPAD-GP-YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 71 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps 71 (378)
+++.++||+.+++++.+. ..+.. .+ ...+..++|+ |||++|+|||||+...++++++||++||+||+|||
T Consensus 108 ~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs 187 (534)
T 2y53_A 108 GIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187 (534)
T ss_dssp HHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 467789999988776432 11211 12 2457889997 99999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCCC
Q 017060 72 EQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGK 149 (378)
Q Consensus 72 ~~~~~~~~~l~~~l~~ag-lP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG~ 149 (378)
+.+|+++..+++++.++| +|+|++|+|+|.+.++...+ +++|.|.||||+.+|+.|++.++ ..++||+++|+|||
T Consensus 188 ~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk 264 (534)
T 2y53_A 188 TATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSL 264 (534)
T ss_dssp GGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCC
T ss_pred CcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCC
Confidence 999999999999999999 89999999998654433332 57999999999999999998764 23789999999999
Q ss_pred CcEEEcCCc-----CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCH
Q 017060 150 SPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 224 (378)
Q Consensus 150 ~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~ 224 (378)
||+||++|| |++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.
T Consensus 265 ~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred CeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhCCCeEeeCCcccC------CCCeeeeceeeccCCCc--ccccccccccceEEeeecC---CH---
Q 017060 225 EQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK---DL--- 290 (378)
Q Consensus 225 ~~~~~~~~~i~~a~~~ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~--- 290 (378)
+++++++++|+++ .+|+++++||+... ..|+|++|||+.+++++ |.+++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~ 423 (534)
T 2y53_A 345 EQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423 (534)
T ss_dssp HHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---C
T ss_pred HHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccC
Confidence 9999999999999 68999999987421 35899999999999887 6899999999999999999 99
Q ss_pred --HHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc--ceeEEEEcCCCC---------CCCCCCccCCCCCCCCCc-chH
Q 017060 291 --DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------FDAAIPFGGYKQSGQGRE-KGS 356 (378)
Q Consensus 291 --~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v~vN~~~~---------~~~~~pfgG~~~sG~g~~-~g~ 356 (378)
||||+++|+++|||++||||+|.++++++++++ ++|+|+||++.. ..+.+||||+|+||+|++ +|.
T Consensus 424 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~ 503 (534)
T 2y53_A 424 PEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGL 503 (534)
T ss_dssp TTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGG
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchH
Confidence 999999999999999999999999999999999 899999998642 357899999999999999 699
Q ss_pred HHHHhhhhceEEEEe
Q 017060 357 YSLSNYLQVKAVVTA 371 (378)
Q Consensus 357 ~~l~~~~~~k~~~~~ 371 (378)
+++++|++.|++...
T Consensus 504 ~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 504 RALAFYHRRSAIQAA 518 (534)
T ss_dssp GGGGGGEEEEEEEEE
T ss_pred HHHHHHhhhheeecC
Confidence 999999999998765
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-77 Score=634.82 Aligned_cols=365 Identities=30% Similarity=0.467 Sum_probs=341.6
Q ss_pred HHHHHHHHHHHHhhhcCcc--CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
++++++||+.+++++.+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.
T Consensus 614 ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~ 693 (1001)
T 3haz_A 614 AADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAR 693 (1001)
T ss_dssp HHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHH
Confidence 5789999999999877653 34455677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC--CCCcceeecCCCCcEEEcCC
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~--~~~~v~~e~gG~~~~iV~~d 157 (378)
.+++++.++|+|+|++|+++|++.+ +..|++||+||.|+||||+.+|+.|.+.++++ +++|+++|+|||||+||++|
T Consensus 694 ~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~d 772 (1001)
T 3haz_A 694 EAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADAT 772 (1001)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCC
Confidence 9999999999999999999998777 99999999999999999999999999988863 47899999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++.+++++++++|+++
T Consensus 773 ADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a 852 (1001)
T 3haz_A 773 ALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM 852 (1001)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++| ++ +||.... .|+|+.|||+.+ +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.++
T Consensus 853 ~~~g-~v-~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~ 927 (1001)
T 3haz_A 853 KTEA-RL-HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDS 927 (1001)
T ss_dssp HHHS-EE-EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHH
T ss_pred HhcC-eE-eccccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHH
Confidence 9888 88 8887543 599999999974 6788999999999999999996 79999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017060 316 ANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||+.... .+.+||||+|.||+| +++|.++|++|++.|+|+++.
T Consensus 928 a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 928 IEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999999999997653 367899999999999 578999999999999999875
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-74 Score=576.04 Aligned_cols=353 Identities=20% Similarity=0.308 Sum_probs=317.6
Q ss_pred HHHHHHHHHHHHhh--hcCccC----CC--CCC-cceeeeeeeceEEEEEcCCCcchHHH--HHhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+.++++ ..+... +. +.+ ...+++++|+|||++|+|||||+... ++++++||++||+||+||
T Consensus 94 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKp 173 (510)
T 1ez0_A 94 TANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKG 173 (510)
T ss_dssp HHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEEC
Confidence 46789999998876 433321 11 112 13578999999999999999999874 499999999999999999
Q ss_pred CCCChhhHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC--Cccee
Q 017060 71 AEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTL 144 (378)
Q Consensus 71 s~~~~~~~~~l~~~l----~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~--~~v~~ 144 (378)
|+.+|+++.++++++ .++|+|+|++++++|.+.+.++.|++||++|.|+||||+.+|+.|++.+++ ++ +|+++
T Consensus 174 s~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~l~~~pv~l 252 (510)
T 1ez0_A 174 HTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE-RPEPIPFYG 252 (510)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc-cCCCccEEE
Confidence 999999999999998 567999999999999777889999999999999999999999999999887 54 99999
Q ss_pred ecCCCCcEEEcCCcCHH--HHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCcccccc
Q 017060 145 ELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 221 (378)
Q Consensus 145 e~gG~~~~iV~~dadl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl 221 (378)
|+|||||+||++|||++ .|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++ ||+
T Consensus 253 ELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~ 322 (510)
T 1ez0_A 253 ELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STL 322 (510)
T ss_dssp ECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCC
T ss_pred ECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCC
Confidence 99999999999999999 99999999999999999999999999999 999999999999998864 678
Q ss_pred CCHHHHHHHHHHHHHhhh-CCCeEeeCCcccCCCCeeeeceeeccCCCc---ccccccccccceEEeeecCCHHHHHHHH
Q 017060 222 IDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRS 297 (378)
Q Consensus 222 ~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~ 297 (378)
+++.+.+++.++++++++ +|+++++||. .|+|+.|||+.+++++ |.+++||+||||++|++|+|+||||+++
T Consensus 323 ~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~a 398 (510)
T 1ez0_A 323 LTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLS 398 (510)
T ss_dssp SSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHH
Confidence 888899999999999984 7999999997 2899999999887777 9999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCH--HHHHHHHHHc--ceeEEEEcCCCC---CCCCCCccC-CCCCCCCC--cchHHHHHhhhhceE
Q 017060 298 NASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQGR--EKGSYSLSNYLQVKA 367 (378)
Q Consensus 298 n~~~~gl~~~v~s~d~--~~~~~~~~~l--~~g~v~vN~~~~---~~~~~pfgG-~~~sG~g~--~~g~~~l~~~~~~k~ 367 (378)
|+++|||++||||+|. ++++++++++ ++|+|+||++.. ..+.+|||| +|.||+|+ ++|.+||++|++.|+
T Consensus 399 N~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~ 478 (510)
T 1ez0_A 399 EMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVA 478 (510)
T ss_dssp HTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEE
T ss_pred hcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEE
Confidence 9999999999999987 7899999999 799999999764 357899999 79999885 479999999999887
Q ss_pred EE
Q 017060 368 VV 369 (378)
Q Consensus 368 ~~ 369 (378)
+.
T Consensus 479 ~~ 480 (510)
T 1ez0_A 479 YQ 480 (510)
T ss_dssp EE
T ss_pred Ec
Confidence 64
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-74 Score=580.82 Aligned_cols=354 Identities=23% Similarity=0.328 Sum_probs=318.6
Q ss_pred HHHHHHHHHHHHhhh--cCccC----CC---CCCcceeeeeeeceEEEEEcCCCcchHHHH--HhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~--~~~~~----~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+..+++. .+... +. ..+...++.++|+|||++|+|||||+...+ +++++||++||+||+||
T Consensus 127 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKp 206 (528)
T 3v4c_A 127 TTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKG 206 (528)
T ss_dssp HHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEEC
Confidence 567899999998872 22221 11 123456889999999999999999998754 89999999999999999
Q ss_pred CCCChhhHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC--Cccee
Q 017060 71 AEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTL 144 (378)
Q Consensus 71 s~~~~~~~~~l~~~l----~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~--~~v~~ 144 (378)
|+.+|+++.++++++ .++|+|+|++|++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ ++ +|+++
T Consensus 207 s~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~-~~~~~pv~l 285 (528)
T 3v4c_A 207 HSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAA-RPEPIPFFG 285 (528)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEE
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhh-ccCCCceEE
Confidence 999999999998875 468999999999999888899999999999999999999999999999887 67 89999
Q ss_pred ecCCCCcEEEcCCc---CHHHHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCccccc
Q 017060 145 ELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGP 220 (378)
Q Consensus 145 e~gG~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gp 220 (378)
|+|||||+||++|| |++.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|++++++++.| +.+||
T Consensus 286 ElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp 359 (528)
T 3v4c_A 286 ELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTD 359 (528)
T ss_dssp ECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCH
T ss_pred ecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCH
Confidence 99999999999999 88999999999999999999999999999997 9999999999999988654 57899
Q ss_pred cCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCc---ccccccccccceEEeeecCCHHHHHHHH
Q 017060 221 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRS 297 (378)
Q Consensus 221 l~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~ 297 (378)
+++....+++.++++ ++|+++++||+. .|+|+.|||+.+++++ |.+++||+||||++|++|+|+||||+++
T Consensus 360 ~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~a 433 (528)
T 3v4c_A 360 GIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELA 433 (528)
T ss_dssp HHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHH
Confidence 998888888777764 479999999975 6899999999988777 8999999999999999999999999999
Q ss_pred HcCCCCceEEEecC--CHHHHHHHHHHcc--eeEEEEcCCCC---CCCCCCccC-CCCCCCCCcc--hHHHHHhhhhceE
Q 017060 298 NASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPFGG-YKQSGQGREK--GSYSLSNYLQVKA 367 (378)
Q Consensus 298 n~~~~gl~~~v~s~--d~~~~~~~~~~l~--~g~v~vN~~~~---~~~~~pfgG-~~~sG~g~~~--g~~~l~~~~~~k~ 367 (378)
|+++|||+++|||+ |.+++++++++++ +|+|+||+++. ..+.+|||| +|.||+|+++ |.+|+++|+++|+
T Consensus 434 N~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~ 513 (528)
T 3v4c_A 434 RGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVA 513 (528)
T ss_dssp HHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEE
T ss_pred hcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHH
Confidence 99999999999999 8899999999997 99999999765 358899999 9999999975 9999999999987
Q ss_pred E
Q 017060 368 V 368 (378)
Q Consensus 368 ~ 368 (378)
+
T Consensus 514 ~ 514 (528)
T 3v4c_A 514 Y 514 (528)
T ss_dssp E
T ss_pred h
Confidence 5
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-70 Score=543.27 Aligned_cols=331 Identities=17% Similarity=0.180 Sum_probs=264.4
Q ss_pred HHHHHHHHHHHHhhhc------CccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCC
Q 017060 2 TTRLFRYYAGWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 72 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~ 72 (378)
+++.++|++++++.+. ++..+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+
T Consensus 84 ~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~ 161 (468)
T 1vlu_A 84 KGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGK 161 (468)
T ss_dssp STTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCG
T ss_pred hHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCC
Confidence 3467889998888776 333221 12445689999999999999999 9 89999999999999999999999
Q ss_pred CChhhHHHHHHHHH----H----cCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCccee
Q 017060 73 QTPLSALYVSKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 144 (378)
Q Consensus 73 ~~~~~~~~l~~~l~----~----aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~ 144 (378)
.+|+++..+++++. + +|+|+|++|+++ +++++++.|.+||++|.|.||||+.+|+.|++.+ +||+++
T Consensus 162 ~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~l 236 (468)
T 1vlu_A 162 ESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLG 236 (468)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTT
T ss_pred ccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEe
Confidence 99999999999995 8 999999999999 6667899999999999999999999999998764 689999
Q ss_pred ecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhccc---CCCCCCCcccccc
Q 017060 145 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQ 221 (378)
Q Consensus 145 e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl 221 (378)
|+|||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++ |+|+++|.++++++++ |+|.+
T Consensus 237 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-------- 306 (468)
T 1vlu_A 237 HADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-------- 306 (468)
T ss_dssp BCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH--------
T ss_pred ecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH--------
Confidence 99999999999999999999999999999999 99999999999999 9999999999999987 77532
Q ss_pred CCHHHHHHHHHH-HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcC
Q 017060 222 IDSEQFEKILKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300 (378)
Q Consensus 222 ~~~~~~~~~~~~-i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 300 (378)
+++ |++++ ++++||+ | +.||++ +++++.+++||+||||++|++|+|+||||+++|++
T Consensus 307 ---------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 364 (468)
T 1vlu_A 307 ---------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTH 364 (468)
T ss_dssp ---------HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTS
T ss_pred ---------hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhC
Confidence 344 56554 3566775 4 789997 68899999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHHHcceeEEEEcCCCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 301 ~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfg-----G~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+|||++||||+|.++++++++++++|+|+||++....+.+||| |+|.||+|++ |.+|+++|++.|++.++.
T Consensus 365 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 365 SSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999999999999987777889999 9999999999 999999999999998863
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-68 Score=531.08 Aligned_cols=327 Identities=16% Similarity=0.223 Sum_probs=299.4
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHH----HHHHHcCCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~----~~l~~aglP~g~v~~v~~ 100 (378)
.+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++
T Consensus 98 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g 177 (464)
T 3k9d_A 98 NEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTV 177 (464)
T ss_dssp TTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSS
T ss_pred CCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 4566788999999999999999999999999999999999999999999999999755 456889999999999999
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecC-CCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcc
Q 017060 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~g-G~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C 179 (378)
.+.+.++.|++||++|.|+||||+.+. +.+++ ++||+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|
T Consensus 178 ~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C 251 (464)
T 3k9d_A 178 PTIQGTDQLMKHKDTAVILATGGSAMV----KAAYS-SGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTIC 251 (464)
T ss_dssp CCHHHHHHHHHCTTEEEEEECSCHHHH----HHHTT-SSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCST
T ss_pred CCHHHHHHHHhCCCCCEEEEeCChHHH----HHHHh-cCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 878899999999999999999999853 44444 78998 7888 99999999999999999999999999999999
Q ss_pred cCCCeEEEeccchHHHHHHHHHHH-------hhcccCCCC-CCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017060 180 CAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 180 ~a~~~v~V~~~~~~~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
++++++|||++++|+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||..
T Consensus 252 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~- 330 (464)
T 3k9d_A 252 ASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET- 330 (464)
T ss_dssp TSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-
T ss_pred CCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-
Confidence 999999999999999999999975 567889887 78899999999999999999999999999999998863
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHH----HHHHcCCCCceEEEecCCHHHHHHHHHHcceeE
Q 017060 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 327 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 327 (378)
++++++++. +|+||||++|++|+|+|||| +++|++++||+++|||+|.++++++++++++|+
T Consensus 331 -------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~ 396 (464)
T 3k9d_A 331 -------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSR 396 (464)
T ss_dssp -------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEE
T ss_pred -------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeE
Confidence 356677764 89999999999999999997 799999999999999999999999999999999
Q ss_pred EEEcCCCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 328 VWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 328 v~vN~~~~---------~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
|+||++.. ..+.+|||| +.+|.|..+|..|+++|++.|+|.+..+
T Consensus 397 v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 397 LLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp EEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred EEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 99999764 468899998 7899999999999999999999988754
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-69 Score=531.98 Aligned_cols=321 Identities=18% Similarity=0.170 Sum_probs=274.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC---CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.++++..++..+.. .+...++.++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|+++
T Consensus 104 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~ 181 (463)
T 2h5g_A 104 LAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSN 181 (463)
T ss_dssp HHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHH
Confidence 46788999988877776653321 3445789999999999999887 87766 8999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEE
Q 017060 79 LYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 79 ~~l~~~l~~a----glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV 154 (378)
.++++++.++ | |+|+++++++ +.++++.|++||++|.|.||||+.+|+.|++.++ +||+++|+|||||+||
T Consensus 182 ~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV 256 (463)
T 2h5g_A 182 RILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYV 256 (463)
T ss_dssp HHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEE
T ss_pred HHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEE
Confidence 9999999999 8 9999999999 6778999999999999999999999999998765 7899999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.| ||.|++++|+|||++++| ||+ ++ +++
T Consensus 257 ~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~-----~~---~~i 302 (463)
T 2h5g_A 257 DSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL-----FD---QII 302 (463)
T ss_dssp CTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-----HH---HHH
T ss_pred cCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-----HH---HHH
Confidence 99999999999999999999 999999999999999998 232 23 357
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++|++++.|+... ..++|+ +++|.+++||+||||++|++|+|+||||+++|+.++||++||||+|.+
T Consensus 303 ~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 373 (463)
T 2h5g_A 303 DMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDEN 373 (463)
T ss_dssp HHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred HHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHH
Confidence 77788999998555422 234443 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhceEEEEeC
Q 017060 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g--~~--~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++++++|.|+||++....+.+||||+|+||+| ++ +|.+||++|++.|+|.++.
T Consensus 374 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 374 TAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 9999999999999999998777788999999999999 65 8999999999999998874
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-68 Score=524.34 Aligned_cols=323 Identities=22% Similarity=0.240 Sum_probs=273.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.+++++.+++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++
T Consensus 102 ~~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 178 (444)
T 4ghk_A 102 MVEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESN 178 (444)
T ss_dssp HHHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHH
T ss_pred HHHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 345677777776543 333221 23556789999999999999998 8 58899999999999999999999999999
Q ss_pred HHHHHHH----HHcCCCCCcEEEEeCCch-hhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 79 LYVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~l----~~aglP~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
.++++++ .++|+|+|++++++|.+. ..+..|..||++|.|.||||+.+++.+++.+ ++|+++|+|||||+|
T Consensus 179 ~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~I 254 (444)
T 4ghk_A 179 TALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVY 254 (444)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEE
Confidence 9999997 789999999999998554 5788888999999999999999999998764 589999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhccc---CCCCCCCccccccCCHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 230 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~ 230 (378)
|++|||++.|++.+++++|.|+| .|++++|+|||++++|+|+++|.++++++++ |+|. .
T Consensus 255 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~ 316 (444)
T 4ghk_A 255 VDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------A 316 (444)
T ss_dssp ECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------H
T ss_pred ECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------H
Confidence 99999999999999999999999 9999999999999999999999999999887 6542 2
Q ss_pred HHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEec
Q 017060 231 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 310 (378)
Q Consensus 231 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s 310 (378)
.++++++. . | ++ +++++.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 317 ~~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 373 (444)
T 4ghk_A 317 RAVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVT 373 (444)
T ss_dssp HHHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEEC
T ss_pred HHHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEe
Confidence 45566542 1 1 11 356789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 017060 311 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 311 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g----~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+|.++++++++++++|.|+||++..+.+..||||.|+||+| +++|.+|+++|++.|+|+++.
T Consensus 374 ~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 374 EDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp SBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999999998877888999999999998 678999999999999998764
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-67 Score=519.20 Aligned_cols=321 Identities=21% Similarity=0.216 Sum_probs=281.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.++++ .++..+. ..+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 46778888887765 3433221 22445688999999999999875 478999999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017060 79 LYVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~l~----~aglP~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
.++++++. ++|+|+|++|++++. .++.++.|..||++|.|+||||+.+|+.|++.+ .+|+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 679999999999984 456788899999999999999999999998875 489999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017060 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.|+| .|++++|+|||++++|+|+++|.+++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999887642
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017060 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
+.||... .+ |+ ||| +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 1122211 12 33 886 345788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 017060 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g----~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++++|.|+||+.....+.+||||.|+||+| +++|.+|+++|++.|+|.++.
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999997777788999999999997 468999999999999998874
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-65 Score=504.00 Aligned_cols=328 Identities=19% Similarity=0.262 Sum_probs=275.5
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHH----HcCCCCCcEEEEeC
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~ 100 (378)
.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|+++++++
T Consensus 93 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g 172 (452)
T 3my7_A 93 DNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQ 172 (452)
T ss_dssp ----CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSS
T ss_pred CCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcC
Confidence 34557889999999999999999999999999999999999999999999999998888765 78999999999999
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCccc
Q 017060 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~ 180 (378)
.+.+.++.|++||+++.|.||||+.+++ .++. ++||+++|+|||+|+||++|||++.|++.++.++|+++||.|+
T Consensus 173 ~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~ 247 (452)
T 3my7_A 173 PSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCA 247 (452)
T ss_dssp CCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTT
T ss_pred CCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccC
Confidence 8888999999999999999999998654 3443 6899999999999999999999999999999999999999999
Q ss_pred CCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc---CCCCee
Q 017060 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYY 257 (378)
Q Consensus 181 a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~~~g~~ 257 (378)
+++++|||++++|+|+++|+++ .||+++++++++++++++++...|++++ |+... ...|+|
T Consensus 248 a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v~-G~~~~~~~~~~G~~ 311 (452)
T 3my7_A 248 SEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKIV-GQPATAIAEMAGVK 311 (452)
T ss_dssp CEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGGT-TCCHHHHHHHHTCC
T ss_pred CCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeEe-cCccchhHHhCCce
Confidence 9999999999999999999874 4999999999999999998766777764 66532 135899
Q ss_pred eecee-------eccCCCcccccccccccceEEeeecCCHHHHHHHHHcCC----CCceEEEecCCHHHHHH---HHHHc
Q 017060 258 IKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVFTHNLDTANT---LMRAL 323 (378)
Q Consensus 258 ~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~s~d~~~~~~---~~~~l 323 (378)
++||+ +.++++++++.+ |+||||++|++|+|+|||++++|++. +||+++|||+|.+.+++ +++++
T Consensus 312 v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l 390 (452)
T 3my7_A 312 VPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKM 390 (452)
T ss_dssp CCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHC
T ss_pred eCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhC
Confidence 99997 778888999876 89999999999999999999999985 99999999999887777 99999
Q ss_pred ceeEEEEcCCCCCC-----------CCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCC
Q 017060 324 RVGSVWINCFDVFD-----------AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 375 (378)
Q Consensus 324 ~~g~v~vN~~~~~~-----------~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~ 375 (378)
++|+|+||++..+. +.+++ |++..|.+..++.-+.+.+.+.|+|..+.+|+
T Consensus 391 ~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 391 KTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp CCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECCC---
T ss_pred CEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 99999999975431 22233 56667777777778899999999999988764
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.023 Score=54.10 Aligned_cols=260 Identities=17% Similarity=0.179 Sum_probs=147.6
Q ss_pred CCCcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCe-EE-EeCCCCChhhHHHHHHHHHHcCCCCCcEEEE
Q 017060 24 DGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNT-IV-LKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 98 (378)
Q Consensus 24 ~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~-vv-lkps~~~~~~~~~l~~~l~~aglP~g~v~~v 98 (378)
..|...-.++.|+--|+++.|. .||. +.+...+||-.+|+. +| .-|++.. .....+.-..+.+|..+ +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EE
Confidence 4566677889999999999994 4664 456667899999996 33 3444322 22333444455666543 33
Q ss_pred eCCchhhHHHHhh----CCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec-CCCCc--EEEcCCcCHHHHHHHHHHHH
Q 017060 99 SGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYAL 171 (378)
Q Consensus 99 ~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~-gG~~~--~iV~~dadl~~aa~~i~~~~ 171 (378)
.-.|...-.+|.- -|.+|.|+=.|..=+..+ +.... + .|-..+ .|-+= +|-++++|.+..+..++.-+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQA 266 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQA 266 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHH
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhh
Confidence 3224333333432 478999998888766542 22221 1 132222 23333 33345689999888877665
Q ss_pred hhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017060 172 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 172 ~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
=+... .+.++|..+ ++|.+++.+.+.++--.. .. .+.+.+.++
T Consensus 267 EHd~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l-----------~r---~~i~~~sl~---------------- 309 (423)
T 4gic_A 267 EHDED-----AQAILISPD--AAHLEAVQASIERLLPGM-----------ER---AEVIRTSLE---------------- 309 (423)
T ss_dssp TTCTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGC-----------TT---HHHHHHHHH----------------
T ss_pred ccCCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhC-----------cc---HHHHHHHHh----------------
Confidence 44332 334666554 455555555443321000 00 011111111
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcc-eeEEEE
Q 017060 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWI 330 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~v 330 (378)
-+| .++.++|++|+++++|..-.- ..-|.++|+. .+..+++ +|.|++
T Consensus 310 -------------------------~~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFl 357 (423)
T 4gic_A 310 -------------------------RRG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFM 357 (423)
T ss_dssp -------------------------HHC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEE
T ss_pred -------------------------cCc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeec
Confidence 122 355679999999999985433 4668888865 6778885 999999
Q ss_pred cCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 017060 331 NCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368 (378)
Q Consensus 331 N~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~ 368 (378)
..+... ++.+|= +|..++.+..+...|++.-++
T Consensus 358 G~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 358 GRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp C----------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred CCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 875431 233444 455666666778888876554
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.055 Score=51.59 Aligned_cols=258 Identities=19% Similarity=0.181 Sum_probs=145.8
Q ss_pred CcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCeEEE--eCCCCChhhHHHHHHHHHHcCCCCCcEEEEeC
Q 017060 26 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 26 ~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 100 (378)
|...-.++.|+--|+++.|. -|| .+.++..+||-.+|+.=|+ -|+ .....+.-..+.+|..+ +..-
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp----~i~p~iL~AA~l~Gv~e----Iy~v 184 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPP----PIADEILYAAQLCGVQD----VFNV 184 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECS----SCCHHHHHHHHHTTCCE----EEEC
T ss_pred CcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCC----CCCHHHHHHHHHcCCCE----Eeec
Confidence 55567789999999999996 566 4556667899999995444 444 12223334445666543 2222
Q ss_pred CchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec-CCCCc--EEEcCCcCHHHHHHHHHHHHhh
Q 017060 101 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYALFF 173 (378)
Q Consensus 101 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~-gG~~~--~iV~~dadl~~aa~~i~~~~~~ 173 (378)
.|...-.+|. +-|++|.|+=.|..=+..+ |.........|-..+ .|-+= +|-++++|.+..+..++.-+=+
T Consensus 185 GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 185 GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 2333333333 2477888887777655432 211100011222222 23333 3334568888887777655533
Q ss_pred cCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCC
Q 017060 174 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 253 (378)
Q Consensus 174 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 253 (378)
... .+.++|-.+ ++|.+++.+.+.++--..| . .+ .++.
T Consensus 263 d~~-----a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r---~~----ia~~----------------- 300 (434)
T 1kae_A 263 GPD-----SQVILLTPA--ADMARRVAEAVERQLAELP-----------R---AE----TARQ----------------- 300 (434)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------T---HH----HHHH-----------------
T ss_pred CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------h---HH----HHHH-----------------
Confidence 332 334566544 4444444443332110000 0 00 0111
Q ss_pred CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEEcC
Q 017060 254 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 332 (378)
Q Consensus 254 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~ 332 (378)
-+..- .++.++|++|+++++|..-.- ..-|.++|+. .+..++ ++|.|++..
T Consensus 301 -----------------------sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 301 -----------------------ALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGD 352 (434)
T ss_dssp -----------------------HHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEEST
T ss_pred -----------------------HHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCC
Confidence 11222 566789999999999985443 4678898864 677888 599999997
Q ss_pred CCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 333 FDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 333 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+.. .+..+|=+ |..++.+..+...|++.-++.
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred CCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 643 23556654 445666667788888765553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 378 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-147 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-146 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-127 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-103 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 4e-88 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-84 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-76 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 6e-67 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 9e-37 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-25 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 9e-18 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 422 bits (1087), Expect = e-147
Identities = 224/364 (61%), Positives = 277/364 (76%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT
Sbjct: 123 LRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNT 182
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST
Sbjct: 183 VVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTE 242
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR
Sbjct: 243 VGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL 302
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE
Sbjct: 303 FVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLE 362
Query: 246 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 305
GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+
Sbjct: 363 CGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLS 422
Query: 306 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 365
AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +V
Sbjct: 423 AGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEV 482
Query: 366 KAVV 369
K V
Sbjct: 483 KTVT 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 421 bits (1084), Expect = e-146
Identities = 231/372 (62%), Positives = 278/372 (74%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPAL
Sbjct: 118 MVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 177
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
A GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF
Sbjct: 178 ATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 237
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC C
Sbjct: 238 TGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSC 297
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
AGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 298 AGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 357
Query: 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S
Sbjct: 358 GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 417
Query: 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 360
YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L
Sbjct: 418 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 477
Query: 361 NYLQVKAVVTAL 372
Y +VK V +
Sbjct: 478 AYTEVKTVTVKV 489
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 373 bits (958), Expect = e-127
Identities = 147/380 (38%), Positives = 219/380 (57%), Gaps = 8/380 (2%)
Query: 1 MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 60
+ YYAG A + G G T EP+GV I+ WN+P ++ AWK PAL
Sbjct: 121 AAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPAL 180
Query: 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 120
ACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K++F
Sbjct: 181 ACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSF 239
Query: 121 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180
TGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ C
Sbjct: 240 TGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCT 298
Query: 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240
G+R FV + QF+E+ VVGDP + G I Q +K+L ++
Sbjct: 299 NGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358
Query: 241 GAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 294
GA++ GGE L GY++ P V +DDM K+EIFGPV S+L + +EV+
Sbjct: 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVL 418
Query: 295 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 354
QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK SG GRE
Sbjct: 419 QRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGREN 478
Query: 355 GSYSLSNYLQVKAVVTALKN 374
G ++ Y Q+K V+ + +
Sbjct: 479 GQATVDYYSQLKTVIVEMGD 498
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 311 bits (797), Expect = e-103
Identities = 125/344 (36%), Positives = 190/344 (55%), Gaps = 3/344 (0%)
Query: 27 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 86
+ +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL+AL +++L
Sbjct: 130 HTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK 189
Query: 87 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 146
+ P GV+NI+ G G T G L H +V ++ TGS TG+ ++ S++K +EL
Sbjct: 190 DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTASSIKRTHMEL 247
Query: 147 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 206
GGK+P IV +DAD++ E ++N GQ C A R + + +YD VEK A
Sbjct: 248 GGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATL 307
Query: 207 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTG 265
G P + GP E++ K + G K+ TGGE+ GYY PT+ G
Sbjct: 308 KSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAG 367
Query: 266 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 325
D I + E+FGPV S+ + + ++V+ +N SQYGLA+ V+T ++ A+ + L+
Sbjct: 368 ALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQY 427
Query: 326 GSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
G W+N + + +P GG K SG G++ Y L +Y V+ V+
Sbjct: 428 GCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 273 bits (698), Expect = 4e-88
Identities = 127/373 (34%), Positives = 190/373 (50%), Gaps = 12/373 (3%)
Query: 6 FRYYAGWADKIQGLTAPADGPY--HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACG 63
YYA A + + ++ + P+G I PWNFP+ +F + +A G
Sbjct: 142 IEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVG 201
Query: 64 NTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
NT++ K AE + V ++ HEAG PPGV+N + G G GA L H + + FTGS
Sbjct: 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS 261
Query: 124 TTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 178
G + + A + + K +E GGK+ IV E AD D AAE + + QGQ
Sbjct: 262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQK 321
Query: 179 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238
C A SR + + Y+ +E+ A + VG P + GP + +EQ K+L YI G
Sbjct: 322 CSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGK 380
Query: 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298
+ G + GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E ++ +N
Sbjct: 381 NEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVAN 439
Query: 299 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 356
+ YGL GV++ + R VG+++ N PFGG+K SG + G+
Sbjct: 440 DTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499
Query: 357 YS-LSNYLQVKAV 368
L +L++KAV
Sbjct: 500 LDYLRLFLEMKAV 512
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 263 bits (672), Expect = 1e-84
Identities = 123/369 (33%), Positives = 178/369 (48%), Gaps = 8/369 (2%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
G A EP+G+ I P+N+P+ + K+ PAL GN
Sbjct: 113 EGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNV 172
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 125
I K Q +S L +++ EAGLP GV N ++G G G + H V+ + FTGST
Sbjct: 173 IAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTG 232
Query: 126 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 185
G+ + ++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R
Sbjct: 233 IGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRV 289
Query: 186 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 245
V ESV D+ VEK + + + P ID++ + + I D GA
Sbjct: 290 LVMESVADELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATAL 348
Query: 246 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 305
T +R +G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL
Sbjct: 349 TEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQ 405
Query: 306 AGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
A +FT++ A + L VG+V IN PF G K+SG G + YS+
Sbjct: 406 ASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTT 465
Query: 365 VKAVVTALK 373
VK+VV +K
Sbjct: 466 VKSVVFDIK 474
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 239 bits (610), Expect = 9e-76
Identities = 101/365 (27%), Positives = 151/365 (41%), Gaps = 13/365 (3%)
Query: 7 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
+ WA+ + EP+GV I WN+P + + A+A GN +
Sbjct: 74 KELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAV 133
Query: 67 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 126
+LK +E + A ++ L+ + + G D + +TGST
Sbjct: 134 ILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAV 190
Query: 127 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 186
GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F N GQ C A
Sbjct: 191 GKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYIL 249
Query: 187 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 246
S+ +Q VEK G+ K G I+ F+++ I +
Sbjct: 250 CDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQK------VA 302
Query: 247 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 306
G YI PT+ V + ++EIFGPV I+ + L+E IQ N + LA
Sbjct: 303 HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLAL 362
Query: 307 GVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 364
VF++N ++ G V N + +PFGG SG G G S +
Sbjct: 363 YVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSH 422
Query: 365 VKAVV 369
++ +
Sbjct: 423 RRSCL 427
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 217 bits (554), Expect = 6e-67
Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 6/345 (1%)
Query: 27 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 86
EP+GV I P+N+PL K+ + GN +V+K + PL A K L
Sbjct: 147 TEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL 206
Query: 87 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 146
+AG PP + +++ G A + + V ++FTGST G+ V+++ +K +EL
Sbjct: 207 DAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMEL 262
Query: 147 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 206
GG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 263 GGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSL 322
Query: 207 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKP-TVFTG 265
VGDP + GP I ++++ I V+ G ++ GG RLG
Sbjct: 323 RVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPAD 382
Query: 266 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 325
DM++ K E+F PV S ++ KDLD+ I+ +N YGL A VF ++ +R L V
Sbjct: 383 RVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEV 442
Query: 326 GSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369
G+++IN PFGG K+SG RE Y++ K +V
Sbjct: 443 GAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 135 bits (341), Expect = 9e-37
Identities = 55/369 (14%), Positives = 99/369 (26%), Gaps = 48/369 (13%)
Query: 6 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 65
G D + + ++ + + I + + AL GNT
Sbjct: 81 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNT 140
Query: 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YGPTAGAALASHMEVDKLAFTGST 124
I+L+ S + + EA + T + + + + +
Sbjct: 141 ILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIP 200
Query: 125 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 184
G ++ + PV G V E AD+ KA + A C A +
Sbjct: 201 RGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEK 259
Query: 185 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 244
VHE + +F+ K V ++ E
Sbjct: 260 LLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPT----------- 308
Query: 245 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 304
E + +I K++DE I+ G
Sbjct: 309 -------------------------------EYLDLIIAIKVVKNVDEAIEHIKKYSTGH 337
Query: 305 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK----GSYSLS 360
+ + T N A + + +V++N F FG + G ++ G L
Sbjct: 338 SESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLR 397
Query: 361 NYLQVKAVV 369
K VV
Sbjct: 398 ELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 104 bits (260), Expect = 2e-25
Identities = 64/392 (16%), Positives = 119/392 (30%), Gaps = 39/392 (9%)
Query: 6 FRYYAGWADKIQGLTAPAD---------GPYHVQTLHEPIGVAGQIIPWNFPLL--MFAW 54
R +A + A D ++ +G NFPL
Sbjct: 94 LRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGG 153
Query: 55 KVGPALACGNTIVLKTAEQTPLS----ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 110
ALA G +++K P + A + + L + LP + ++ G G AL
Sbjct: 154 DTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALV 213
Query: 111 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH-- 168
SH E+ + FTGS G+ + LA + G + + A+LA
Sbjct: 214 SHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQF 273
Query: 169 -YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 227
++ GQ C F + Q + +++ +
Sbjct: 274 VASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVS 333
Query: 228 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 287
I + + ++EIFGP I+
Sbjct: 334 RGSDDGIDVTFS---------QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384
Query: 288 KDLDEVIQRSNASQYGLAAGVFTHNLDT--ANTLMRALR--VGSVWINCF----DVFDAA 339
+++ +++ S L A + D + L+ L G + N + +V A
Sbjct: 385 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAM 444
Query: 340 I---PFGGYKQSGQGREKGSYSLSNYLQVKAV 368
+ P+ S G+ ++ +L+ A
Sbjct: 445 VHGGPYPASTHSA-STSVGAEAIHRWLRPVAY 475
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 81.8 bits (201), Expect = 9e-18
Identities = 43/341 (12%), Positives = 90/341 (26%), Gaps = 33/341 (9%)
Query: 7 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 66
+ A D + + + + V ++ + + A ++ GN
Sbjct: 85 KDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAA 144
Query: 67 VLKTAEQTPLSALYVSKLL---HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 123
+LK +++ + ++K++ + + S ++ ++ D+
Sbjct: 145 ILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVV 204
Query: 124 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 183
+++ + PV G + EDAD+ KA ++ A C
Sbjct: 205 PRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNA-ME 263
Query: 184 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 243
++ + N V I + D
Sbjct: 264 TLLINPKFSKWWEVLENLTLEGGVT-------------------------IHATKDLKTA 298
Query: 244 LETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 302
LG TV + D E + + IQ N
Sbjct: 299 YFDKLNELGKLTEAIQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHINTHSS 355
Query: 303 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG 343
+ T N A M+ + V+ N F +G
Sbjct: 356 RHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYG 396
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.35 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=5.7e-87 Score=667.73 Aligned_cols=373 Identities=60% Similarity=1.052 Sum_probs=359.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++
T Consensus 119 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l 198 (494)
T d1bxsa_ 119 CIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHM 198 (494)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHH
T ss_pred hhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHH
Confidence 46789999999998888777766777889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
+++|.++|+|+|++|+|+|++.++++.|++||+++.|.||||+.+|+.|++.+++.++||+++|+|||||+||++|||++
T Consensus 199 ~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~ 278 (494)
T d1bxsa_ 199 GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLD 278 (494)
T ss_dssp HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchh
Confidence 99999999999999999998888999999999999999999999999999988875789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++.+++++++++|++++++|
T Consensus 279 ~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 358 (494)
T d1bxsa_ 279 NAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 358 (494)
T ss_dssp HHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||....+.|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++
T Consensus 359 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~ 438 (494)
T d1bxsa_ 359 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 438 (494)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHH
Confidence 99999998777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
++++|+|+||+++...+.+||||+|.||+|+++|.+|+++||+.|+|++++..
T Consensus 439 ~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~~~ 491 (494)
T d1bxsa_ 439 ALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQ 491 (494)
T ss_dssp HSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSC
T ss_pred hCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEecCC
Confidence 99999999999888888999999999999999999999999999999999753
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=4.9e-86 Score=660.64 Aligned_cols=373 Identities=62% Similarity=1.053 Sum_probs=359.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..++..+...+...++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++
T Consensus 119 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l 198 (494)
T d1o04a_ 119 VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYV 198 (494)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHH
Confidence 46788999999998888877766677889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++++++|+|+|++|+|+|++.+.++.|+.||+++.|.||||+++|+.|++.++.+++||+++|+||+||+||++|||+|
T Consensus 199 ~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~ 278 (494)
T d1o04a_ 199 ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMD 278 (494)
T ss_dssp HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHH
Confidence 99999999999999999998888999999999999999999999999999887755889999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++++|||++++|+|++++.++++.+++|+|.++++++||++++.++++++++|++++++|
T Consensus 279 ~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 358 (494)
T d1o04a_ 279 WAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 358 (494)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||....+.|+|++|||+.++++++.+++||+||||++|++|+|++||++++|+++|||++||||+|.+.++++++
T Consensus 359 a~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~ 438 (494)
T d1o04a_ 359 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 438 (494)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHH
Confidence 99999998777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
++++|+|+||+++...+.+||||+|.||+|+++|.+||++||+.|+|+++++.
T Consensus 439 ~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~p~ 491 (494)
T d1o04a_ 439 ALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQ 491 (494)
T ss_dssp HCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECSC
T ss_pred hCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeCCC
Confidence 99999999999888888999999999999999999999999999999999763
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=2.9e-83 Score=641.20 Aligned_cols=375 Identities=39% Similarity=0.739 Sum_probs=356.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.++++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 122 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l 201 (503)
T d1a4sa_ 122 AWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVIL 201 (503)
T ss_dssp HHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred hhhcccccccccccccccccccCCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56788999999988877666555677789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017060 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++|++++ +.++++.|++||++|.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 202 ~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~ 279 (503)
T d1a4sa_ 202 AEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCcEEEECCCcCcEEECCCccHH
Confidence 9999999999999999999 67899999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017060 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.++||.|++++|+|||++++++|++++.+.++++++|+|.++.+++||++++.+++++++++++++++|
T Consensus 280 ~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~G 359 (503)
T d1a4sa_ 280 NAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEG 359 (503)
T ss_dssp HHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCccc------CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 242 AKLETGGERL------GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 242 a~~~~gg~~~------~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++||... ...|+|++|||+.+++++|.++++|+||||++|++|+|.|||++++|+++|||++||||+|.+.
T Consensus 360 a~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~ 439 (503)
T d1a4sa_ 360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439 (503)
T ss_dssp CEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred CEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence 9999999742 2468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC-CCCCC
Q 017060 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK-NPAWL 378 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~-~~~~~ 378 (378)
+.++++++++|+|+||++....+.+||||+|.||+|+++|.+||++||+.|+|++++. -+.||
T Consensus 440 ~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 440 AHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDSLF 503 (503)
T ss_dssp HHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSCCCCCC
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCCCCCCCC
Confidence 9999999999999999988888889999999999999999999999999999999974 44444
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.6e-82 Score=628.76 Aligned_cols=367 Identities=36% Similarity=0.644 Sum_probs=341.5
Q ss_pred HHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHH
Q 017060 4 RLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 82 (378)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~ 82 (378)
+.++|++...........+ ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~ 185 (474)
T d1wnda_ 106 DVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLA 185 (474)
T ss_dssp HHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHH
T ss_pred ccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHH
Confidence 3445555544433332222 234567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHH
Q 017060 83 KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDK 162 (378)
Q Consensus 83 ~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~ 162 (378)
++++++ +|+|++|++++++.++++.|++||+|+.|.||||+++|+.|.+.+++ ++||+++|+|||||+||++|||++.
T Consensus 186 ~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~-~~k~~~lElgG~~p~iV~~dad~~~ 263 (474)
T d1wnda_ 186 ELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEA 263 (474)
T ss_dssp HHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHH
T ss_pred HHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhc-CCCeEEEEcCCCCceEEcCchhhhh
Confidence 999875 99999999999888999999999999999999999999999999887 7899999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCC
Q 017060 163 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 242 (378)
Q Consensus 163 aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga 242 (378)
|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.++++.+||+++..+.+++.+++++++.+|+
T Consensus 264 a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga 343 (474)
T d1wnda_ 264 VVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGH 343 (474)
T ss_dssp HHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSS
T ss_pred hhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred e-EeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017060 243 K-LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 243 ~-~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
. ++.|+....+.|+|+.|||+.++++++.+++||+||||++|++|+|+|||++++|+++|||+++|||+|.++++++++
T Consensus 344 ~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~ 423 (474)
T d1wnda_ 344 IKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSA 423 (474)
T ss_dssp CEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHH
T ss_pred eEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHH
Confidence 5 556666666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++|+|+||++....+.+||||+|.||+|+++|.+||++||+.|+|++++
T Consensus 424 ~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 424 RLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred hCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 999999999998888889999999999999999999999999999999875
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.9e-80 Score=623.29 Aligned_cols=369 Identities=34% Similarity=0.560 Sum_probs=342.3
Q ss_pred HHHHHHHHHHHHhhhcCccCC--CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017060 2 TTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++|++..++...+.... ...+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~ 217 (516)
T d1uzba_ 138 AIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHH
Confidence 467889999988887665432 234566788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEE
Q 017060 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV 154 (378)
++.+++.++|+|+|++|+++|.+.++++.|++||+++.|.||||+++|+.|++.++. .++||+++|+|||||+||
T Consensus 218 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV 297 (516)
T d1uzba_ 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceee
Confidence 999999999999999999999888899999999999999999999999999998762 367899999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017060 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.++||.|++++++|||++++|+|++++.++++++++| |.++++++||+++..++++++++|
T Consensus 298 ~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i 376 (516)
T d1uzba_ 298 DETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred ecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 568899999999999999999999
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017060 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++|+.+ ++|...+..|+|+.|||+.++++++.+++||+||||++|++|+|.|||++++|+++|||++||||+|.+
T Consensus 377 ~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~ 455 (516)
T d1uzba_ 377 EIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKRE 455 (516)
T ss_dssp HHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHH
T ss_pred HHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHH
Confidence 9999988755 566655667999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcch-HHHHHhhhhceEEEEeC
Q 017060 315 TANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKG-SYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g-~~~l~~~~~~k~~~~~~ 372 (378)
.++++++++++|+|+||++.. ..+.+||||+|.||+|+++| .++|++|++.|+|+.|+
T Consensus 456 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 456 HLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEcC
Confidence 999999999999999999754 35789999999999998765 79999999999999874
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.1e-74 Score=579.53 Aligned_cols=372 Identities=31% Similarity=0.470 Sum_probs=336.4
Q ss_pred HHHHHHHHHHHHhhhcCccCC-----CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 2 TTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++.++++..+.... ...+...+++|+|+|||++|+|||||+.++++++++||++||+||+|||+.+|+
T Consensus 117 ~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~ 196 (499)
T d1ky8a_ 117 AVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 196 (499)
T ss_dssp HHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred ccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchh
Confidence 466778888887776654321 223456789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++..+.+++.++|+|.++++++.+++ +....|++|++++.+.||||...++.+.+.++ .+|+++|+||+||+||++
T Consensus 197 ~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~---~~~~~lElgG~np~iV~~ 272 (499)
T d1ky8a_ 197 PAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLE 272 (499)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECT
T ss_pred hhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEEeeccc---ccceEEecCCCCeEEEcC
Confidence 99999999999999999999999865 56788999999999999999999999988654 479999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|+++||.|++++++|||++++|+|+++|+++++++++|+|.|+++++||+++.++++++++++++
T Consensus 273 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 352 (499)
T d1ky8a_ 273 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 352 (499)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCC-eeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017060 237 GVDGGAKLETGGERLGAKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
++.+|++++.||....... .+..+++...+.++|.+++||+||||++|++|+|.+||++++|++++||++||||+|.+.
T Consensus 353 a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~ 432 (499)
T d1ky8a_ 353 AVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 432 (499)
T ss_dssp HHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHH
T ss_pred HHHcCCEEeeeeccccccccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence 9999999999998654221 122223334456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC-CCCC
Q 017060 316 ANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK-NPAW 377 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~-~~~~ 377 (378)
++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+|+++||+.|+|+++++ .+.|
T Consensus 433 ~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 433 IRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 496 (499)
T ss_dssp HHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSC
T ss_pred HHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcCCCCCCC
Confidence 999999999999999998654 4789999999999999999999999999999999975 5555
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.1e-73 Score=561.04 Aligned_cols=360 Identities=29% Similarity=0.415 Sum_probs=321.7
Q ss_pred HHHHHHHHHHHHhhhcCccC----CCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017060 2 TTRLFRYYAGWADKIQGLTA----PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.+++++.....+..... ....+...++.|+|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+
T Consensus 65 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~ 144 (446)
T d1ad3a_ 65 VLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHM 144 (446)
T ss_dssp HHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHH
T ss_pred HHHHHHHHHHHHHHhhcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccc
Confidence 35567777776655544321 12234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017060 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++++. +|+++++++.+.+... ..+ .++++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|
T Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~d 220 (446)
T d1ad3a_ 145 ADLLATLIPQY-MDQNLYLVVKGGVPET-TEL-LKERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKD 220 (446)
T ss_dssp HHHHHHHHHHH-SCTTTEEECCCSHHHH-HHH-TTSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSS
T ss_pred ccccccccccc-ccccccccccccchhh-hhh-cccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecC
Confidence 99999999875 8999999998865544 334 45689999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.++||.|++++|+|||++++|+|++++.++++.+ +|++.++++++||++++.++++++++++++
T Consensus 221 ADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a 299 (446)
T d1ad3a_ 221 CDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ 299 (446)
T ss_dssp SCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS
T ss_pred CchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch
Confidence 9999999999999999999999999999999999999999999998887 799999999999999999999998887654
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+...|+. ....++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 300 -----~~~~g~~-~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~ 373 (446)
T d1ad3a_ 300 -----KVAHGGT-WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIK 373 (446)
T ss_dssp -----CEEECCC-EETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHH
T ss_pred -----hccccee-ecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHH
Confidence 3333333 2346789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017060 318 TLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+||++||+.|+|+++.
T Consensus 374 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 374 KMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp HHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred HHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEcc
Confidence 999999999999998653 4688999999999999999999999999999999874
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2.9e-71 Score=552.11 Aligned_cols=364 Identities=35% Similarity=0.525 Sum_probs=333.0
Q ss_pred HHHHHHHHHHHhhhcCccC------CCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017060 3 TRLFRYYAGWADKIQGLTA------PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
++.+++++..+........ ....+...+++|+|+|||++|+|||||+...+..+++||++||+||+|||+.+|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~ 183 (474)
T d1euha_ 104 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSI 183 (474)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHH
T ss_pred HHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchH
Confidence 4566777666554432211 1223455688999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017060 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.+++++|.++|+|+|++|++++++.++++.|..||+++.|.||||..+++.+.+.++ .+|+++|+||+||+||++
T Consensus 184 ~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~---~k~~~~e~gG~~~~iV~~ 260 (474)
T d1euha_ 184 SGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLE 260 (474)
T ss_dssp HHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc---cceEEEecCCcceEEEEC
Confidence 99999999999999999999999988889999999999999999999999999988754 579999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017060 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.++||.|++++++|||++++++|++.++++...++.|++.+.. .++|++.....+++.+.+..
T Consensus 261 dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 339 (474)
T d1euha_ 261 DADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLIND 339 (474)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTC-SBCCCSCHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCccccc-ccccccchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999988765 57999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017060 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
....+...+..+.. .|+|+.|||+..++++|.+++||+||||++|++|+|+||||+++|++++||+++|||+|.+.+
T Consensus 340 ~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~ 416 (474)
T d1euha_ 340 ANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 416 (474)
T ss_dssp HHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred hhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHH
Confidence 99888887765443 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017060 317 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++++|+|+||++... .+.+||||+|+||+|+++|.+||++||+.|+|+++.+
T Consensus 417 ~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 474 (474)
T d1euha_ 417 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 474 (474)
T ss_dssp HHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEEecC
Confidence 99999999999999997544 5779999999999999999999999999999999864
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=4.6e-63 Score=494.69 Aligned_cols=351 Identities=21% Similarity=0.307 Sum_probs=287.8
Q ss_pred HHHHHHHHHHHHhhhcCccC------C---CCCCcceeeeeeeceEEEEEcCCCcchHHH--HHhhhchhccCCeEEEeC
Q 017060 2 TTRLFRYYAGWADKIQGLTA------P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||++++++...... + ...+...+..++|+|||++|+|||||+... ..++++||++||+||+||
T Consensus 90 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKP 169 (504)
T d1ez0a_ 90 TANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKG 169 (504)
T ss_dssp HHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecC
Confidence 57789999998877544321 1 112345678899999999999999998643 458999999999999999
Q ss_pred CCCChhhHHHHHH----HHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcc--ee
Q 017060 71 AEQTPLSALYVSK----LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV--TL 144 (378)
Q Consensus 71 s~~~~~~~~~l~~----~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v--~~ 144 (378)
|+.+|.++.++.+ +|+++|+|+|++++++|++.++++.|++||+++.|.||||+.+|+.|.+.+++ +++|+ ++
T Consensus 170 s~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~-~~~~~~l~~ 248 (504)
T d1ez0a_ 170 HTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE-RPEPIPFYG 248 (504)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEE
T ss_pred cccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhc-ccccccccc
Confidence 9999998876654 46677999999999999888999999999999999999999999999999887 66665 55
Q ss_pred ecCCCCcEEEcCCcCHHHHH--HHHHHHHhhcCCCcccCCCeEEEeccch-HHHHHHHHHHHhhcccCCCCCCCcccccc
Q 017060 145 ELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQGPQ 221 (378)
Q Consensus 145 e~gG~~~~iV~~dadl~~aa--~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~~~~~~~~~gpl 221 (378)
|+|||||+||++|||++.|+ +.++.++|.++||.|++++++||+++.+ +.|++.+.+.++. .++++.+||+
T Consensus 249 ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~------~~~~~~~gp~ 322 (504)
T d1ez0a_ 249 ELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ------QSPSTLLTPG 322 (504)
T ss_dssp ECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH------CCCBCCSSHH
T ss_pred cccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh------cccccccccc
Confidence 99999999999999999875 4789999999999999999999887765 4677777666553 2456789999
Q ss_pred CCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeec---cCCCcccccccccccceEEeeecCCHHHHHHHHH
Q 017060 222 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT---GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 298 (378)
Q Consensus 222 ~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 298 (378)
++..+++++ ++.+.++|+.+..|+.. +.+..|+++. ++..++++++||+||||++|++|+|+|||++++|
T Consensus 323 i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an 395 (504)
T d1ez0a_ 323 IRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSE 395 (504)
T ss_dssp HHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred hhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHH
Confidence 998887765 56666788888887763 2333333332 3335688999999999999999999999999999
Q ss_pred cCCCCceEEEecCC--HHHHHHHHHHcc--eeEEEEcCCCCC---CC----CCCccCCCCCCCCCcchHHHHHhhhhceE
Q 017060 299 ASQYGLAAGVFTHN--LDTANTLMRALR--VGSVWINCFDVF---DA----AIPFGGYKQSGQGREKGSYSLSNYLQVKA 367 (378)
Q Consensus 299 ~~~~gl~~~v~s~d--~~~~~~~~~~l~--~g~v~vN~~~~~---~~----~~pfgG~~~sG~g~~~g~~~l~~~~~~k~ 367 (378)
+++|||++||||+| ..++.+++++|+ +|+|+||++++. .. ..||||.+.||.+ +.|.+++++|+++..
T Consensus 396 ~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~ 474 (504)
T d1ez0a_ 396 MLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVA 474 (504)
T ss_dssp TCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEE
T ss_pred CCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhh
Confidence 99999999999964 458889999996 899999997642 12 2478888999944 569999999987644
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=6.4e-54 Score=419.41 Aligned_cols=322 Identities=19% Similarity=0.148 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHH
Q 017060 3 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 82 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~ 82 (378)
++.+++++...+...+...+..........++|+|+++++.|||||+..+++++++||++||+||+|||+.+|.++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 44555565554444444333223345677889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCC-cEEEcCC
Q 017060 83 KLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCED 157 (378)
Q Consensus 83 ~~l~~a----glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~-~~iV~~d 157 (378)
+++.++ |+|.++++.+.+........+..++.+. |+||+..+..+.+.+++ ..+++.+|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYL---SLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTC---SEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhcccccccC---eEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence 998876 5555567777765555556665544433 33333334444555554 4566777777655 5788899
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017060 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.++.+.|.+ ||.|++++|++||++++|+|+++|.+...+..++.+.++..
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~--------------------- 291 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT--------------------- 291 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH---------------------
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh---------------------
Confidence 99999999999998876 99999999999999999999999999887755443222100
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017060 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
..+.+.+... ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 292 ------------------~~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~ 350 (414)
T d1o20a_ 292 ------------------REIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 350 (414)
T ss_dssp ------------------HHHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred ------------------hhhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHH
Confidence 0111112211 2234589999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhceEEEEe
Q 017060 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g--~~--~g~~~l~~~~~~k~~~~~ 371 (378)
++++++++|.|+||+.+.+....|||+.+++|+| +. +|++||++|++.|+|+++
T Consensus 351 ~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 351 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred HHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 9999999999999997766555566666666653 22 389999999999999764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.9e-46 Score=361.53 Aligned_cols=311 Identities=17% Similarity=0.176 Sum_probs=223.0
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHH--------HHcCCCCCcEE
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL--------HEAGLPPGVLN 96 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l--------~~aglP~g~v~ 96 (378)
.+...+..+.|+||+++| ++++| ..++...+.||++||+||+||++.++.|+..+.+++ .++|+|+++++
T Consensus 105 ~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i~ 182 (436)
T d1vlua_ 105 DGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182 (436)
T ss_dssp TTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEE
T ss_pred ccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceEE
Confidence 455677889999999998 56777 567788899999999999999999999998877765 46699999999
Q ss_pred EEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCC
Q 017060 97 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176 (378)
Q Consensus 97 ~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~G 176 (378)
++++ ..+.+..|..|+++|.|+||||...++.+.+. ...|++.+++|++|++|++|||++.|++.++.++|.+.|
T Consensus 183 ~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g 257 (436)
T d1vlua_ 183 LIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA 257 (436)
T ss_dssp ECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC---
T ss_pred Eecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCccceeecccccHHHHHHHHHHHhccCCC
Confidence 9987 56788999999999999999999998877554 335999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCe
Q 017060 177 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 256 (378)
Q Consensus 177 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 256 (378)
| |++.++++||+++++.|...+....+. |. .+. .+. .++....+..... ++ ..+.
T Consensus 258 ~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~----~~~~~~~~~~~~~------~~---~~~~ 312 (436)
T d1vlua_ 258 G-CNAMETLLINPKFSKWWEVLENLTLEG---GV------TIH--ATK----DLKTAYFDKLNEL------GK---LTEA 312 (436)
T ss_dssp --CCCCEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECH----HHHHHHHHHHHHH------TC---CCHH
T ss_pred c-cccccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCH----HHHHHhhhhhhhc------cc---cccc
Confidence 7 889999999999998886655544332 10 000 111 2222222211111 11 0122
Q ss_pred eeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcceeEEEEcCCCCC
Q 017060 257 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 336 (378)
Q Consensus 257 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~ 336 (378)
...|++....+.+ +.+|.|+|+++|++++|+||||+++|+.++||+++|||+|.+.+++|++++++|.|+||+.+.+
T Consensus 313 ~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf 389 (436)
T d1vlua_ 313 IQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF 389 (436)
T ss_dssp HHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG
T ss_pred ccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCcc
Confidence 2333333322222 5799999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCCcc-----CCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017060 337 DAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 337 ~~~~pfg-----G~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
....+|| |+ .++..+.+|+.||+++|..|.+...
T Consensus 390 ~Dg~~~g~g~e~Gi-st~k~h~rGp~gl~~ltt~k~~~~g 428 (436)
T d1vlua_ 390 ADGFRYGFGAEVGI-STSKIHARGPVGLDGLVSYQYQIRG 428 (436)
T ss_dssp CC-----------------------CCSGGGEEEEEEEEC
T ss_pred CCCCcccCcceeeE-ecCCCCCCCCcChHHhceEEEEEEC
Confidence 7666776 33 2345567999999999999988764
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.35 E-value=0.051 Score=49.85 Aligned_cols=257 Identities=18% Similarity=0.157 Sum_probs=147.6
Q ss_pred CCcceeeeeeeceEEEEEcCCC---cchHHHHHhhhchhccCCe--EEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEe
Q 017060 25 GPYHVQTLHEPIGVAGQIIPWN---FPLLMFAWKVGPALACGNT--IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 99 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~AL~~Gn~--vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~ 99 (378)
.|...-.++.|+=-|+++.|.- ||. ++++..+||..+|+. |+.-|+...|. +.-..+.+|... +..
T Consensus 110 ~Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~----iy~ 180 (431)
T d1k75a_ 110 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VFN 180 (431)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EEE
T ss_pred CCceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc----eEe
Confidence 4566778899999999999964 664 456667899999984 44566544442 233345555443 333
Q ss_pred CCchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCccee-ecCCCC--cEEEcCCcCHHHHHHHHHHHHh
Q 017060 100 GYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-ELGGKS--PFIVCEDADVDKAAELAHYALF 172 (378)
Q Consensus 100 ~~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~-e~gG~~--~~iV~~dadl~~aa~~i~~~~~ 172 (378)
-.|...-.+|. +-|++|.|+=.|+.=+..+=.....+ ...+-. -+.|-+ -+|-++++|.+.++..++.-+=
T Consensus 181 ~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~--~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAE 258 (431)
T d1k75a_ 181 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR--LDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 258 (431)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHS--TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred cCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhccc--CCccccccccCCceEEEEecCCCCHHHHHHHHHhccC
Confidence 22433333343 24678888888877665432222221 001111 122333 3444566888888877776664
Q ss_pred hcCCCcccCCCeEEEecc--chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcc
Q 017060 173 FNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 250 (378)
Q Consensus 173 ~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~ 250 (378)
+... .+.+++..+ ..+++.+.+.+++..+. . . +. ++..
T Consensus 259 H~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~----r-----------~---~i----~~~s------------- 298 (431)
T d1k75a_ 259 HGPD-----SQVILLTPAADMARRVAEAVERQLAELP----R-----------A---ET----ARQA------------- 298 (431)
T ss_dssp TCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS----S-----------C---HH----HHHH-------------
T ss_pred Cccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch----H-----------H---HH----HHhh-------------
Confidence 4443 233566544 23444444444333211 0 0 00 0000
Q ss_pred cCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEE
Q 017060 251 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVW 329 (378)
Q Consensus 251 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~ 329 (378)
+ +-. .++.++|++|+++++|..-.- ...|.++|+. ++..++ ++|.|+
T Consensus 299 ----------------------~--~~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIf 346 (431)
T d1k75a_ 299 ----------------------L--NAS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVF 346 (431)
T ss_dssp ----------------------H--TTC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEE
T ss_pred ----------------------h--ccc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhh
Confidence 0 011 244579999999999985443 4678888865 577777 699999
Q ss_pred EcCCCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017060 330 INCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 330 vN~~~~---------~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+..+.. .++.+|=|| ..++.+.-+...|++.-++.
T Consensus 347 lG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 347 LGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred cCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence 987643 235566655 45666666778888766553
|