BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017061
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05865|FOLC_BACSU Folylpolyglutamate synthase OS=Bacillus subtilis (strain 168)
GN=folC PE=3 SV=2
Length = 430
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 149/278 (53%), Gaps = 25/278 (8%)
Query: 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRE 136
LGRM +LM RLG+P K + H+AGT GKGST AF+ S+L+ GY+VG +TSP+I T E
Sbjct: 24 LGRMKQLMARLGHPEKKIRAFHVAGTNGKGSTVAFIRSMLQEAGYTVGTFTSPYIITFNE 83
Query: 137 RMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNH-VDI 195
R++V + P+S + L +++K ++ + E G T FE++TA AF FA+ H VD
Sbjct: 84 RISVNGI--PISDEEWTALVNQMKPHVEALDQTEYGQPTEFEIMTACAFLYFAEFHKVDF 141
Query: 196 AVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLV 255
+ E GLGG D+TN++ +VIT+IG +H LG ++E IA K+GIIK G P+V
Sbjct: 142 VIFETGLGGRFDSTNVVEP---LLTVITSIGHDHMNILGNTIEEIAGEKAGIIKEGIPIV 198
Query: 256 LGGPFLPHIEHILRDEASLMCSQVVSAYDAGIRATINGL---SMFNDRPCQSCDIIVQAE 312
P ++R EA + S +DA + L F+ + + C
Sbjct: 199 TAVT-QPEALQVIRHEAERHAAPFQSLHDACVIFNEEALPAGEQFSFKTEEKC------- 250
Query: 313 RDLKLSIELLDVKLCMIGNHQLHNALTATCAALCLRDQ 350
D++ +IG HQ NA + AA L +
Sbjct: 251 --------YEDIRTSLIGTHQRQNAALSILAAEWLNKE 280
>sp|A6H751|FOLC_BOVIN Folylpolyglutamate synthase, mitochondrial OS=Bos taurus GN=FPGS
PE=2 SV=1
Length = 585
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 127/265 (47%), Gaps = 40/265 (15%)
Query: 93 KFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKAL 152
+ +HI GTKGKGST AF ILR+ G G ++SPH+ +RER+ + +P+S++
Sbjct: 92 QLNIIHITGTKGKGSTCAFTERILRSYGLKTGFFSSPHLVQVRERIRIN--GQPISSELF 149
Query: 153 NCLFHKIKGVLDEAIRLENGCIT---HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDAT 209
F ++ L+E + ++ C++ +F LT MAF +F Q VD+AV+E G+GGA D T
Sbjct: 150 TKHFWRLYHRLEET-KDDSSCVSMPGYFRFLTLMAFHVFLQEKVDLAVLEVGIGGAYDCT 208
Query: 210 NIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP-LVLGGPFLPHIEHIL 268
NII + IT++G +HT LG ++E IA K GI K G P + P P +L
Sbjct: 209 NIIRKPVVCG--ITSLGIDHTGLLGDTMEKIAWQKGGIFKSGVPAFTVLQPDEPLA--VL 264
Query: 269 RDEASLMCSQVVSAYDAGIRATINGLSMFNDRPCQSCDIIVQAERDLKLSIELLDVKLCM 328
RD A + + C + + L L +E
Sbjct: 265 RDRAQQISCPLYL--------------------CPPLQALEEGGPPLTLGLE-------- 296
Query: 329 IGNHQLHNALTATCAALCLRDQGGY 353
G HQ NA A A C Q GY
Sbjct: 297 -GEHQRSNAALALQVARCWLQQKGY 320
>sp|Q924L9|FOLC_CRIGR Folylpolyglutamate synthase, mitochondrial OS=Cricetulus griseus
GN=FPGS PE=2 SV=1
Length = 587
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 26/214 (12%)
Query: 92 SKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSA-- 149
++ +H+ GTKGKGST AF ILR+ G G ++SPH+ +RER+ + +P+S
Sbjct: 94 NQLNIIHVTGTKGKGSTCAFTERILRSYGLKTGFFSSPHLVQVRERIRIN--GKPISPEL 151
Query: 150 --KALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARD 207
K L+H+++ D++ +F LT MAF +F Q VD+AV+E G+GGA D
Sbjct: 152 FTKHFWRLYHQLEEFKDDS---HVAMPAYFRFLTLMAFHVFLQEKVDLAVVEVGIGGAYD 208
Query: 208 ATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP----LVLGGPFLPH 263
TNII + ++++G +HT+ LG ++E IA K GI K G P L GP
Sbjct: 209 CTNIIRKPVVCG--VSSLGMDHTSLLGDTVEKIAWQKGGIFKPGVPAFTVLQPEGPLA-- 264
Query: 264 IEHILRDEAS------LMCSQVVSAYDAGIRATI 291
+LRD A +C + + D G+ T+
Sbjct: 265 ---VLRDRAQQTSCPLYLCPPLEALEDGGLPLTL 295
>sp|Q05932|FOLC_HUMAN Folylpolyglutamate synthase, mitochondrial OS=Homo sapiens GN=FPGS
PE=1 SV=3
Length = 587
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 18/188 (9%)
Query: 93 KFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKAL 152
+ +H+ GTKGKGST AF ILR+ G G ++SPH+ +RER+ + +P+S +
Sbjct: 95 RLNIIHVTGTKGKGSTCAFTECILRSYGLKTGFFSSPHLVQVRERIRIN--GQPISPELF 152
Query: 153 NCLFHKIKGVLDEAIRLENGCIT---HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDAT 209
F ++ L+E + C++ +F LT MAF +F Q VD+AV+E G+GGA D T
Sbjct: 153 TKYFWRLYHRLEETK--DGSCVSMPPYFRFLTLMAFHVFLQEKVDLAVVEVGIGGAYDCT 210
Query: 210 NIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP----LVLGGPFLPHIE 265
NII + ++++G +HT+ LG ++E IA K GI K G P L GP
Sbjct: 211 NIIRKPVVCG--VSSLGIDHTSLLGDTVEKIAWQKGGIFKQGVPAFTVLQPEGPLA---- 264
Query: 266 HILRDEAS 273
+LRD A
Sbjct: 265 -VLRDRAQ 271
>sp|P15925|FOLC_LACCA Folylpolyglutamate synthase OS=Lactobacillus casei GN=fgs PE=1 SV=1
Length = 428
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 22/216 (10%)
Query: 46 MNF---MNYLDSLKNFEKSGVPKGAGTDSDDGFDLGRMNRLMDRLGNPHSKFKTVHIAGT 102
MN+ + Y+ S K+G D R+ L+ LGNP + + +H+ GT
Sbjct: 1 MNYTETVAYIHSFPRLAKTG-------------DHRRILTLLHALGNPQQQGRYIHVTGT 47
Query: 103 KGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGV 162
GKGS A ++ +L A G +VG YTSP I ER+ + + P+ AL ++
Sbjct: 48 NGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMID--HEPIPDAALVNAVAFVRAA 105
Query: 163 LDEAIRLE-NGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASV 221
L+ + + + +T FE +TA+ + F Q VD+AVIE G+GG D+TN+I+ SV
Sbjct: 106 LERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVITP---VVSV 162
Query: 222 ITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVLG 257
+T + +H LG ++ IA K+GIIK G P+V G
Sbjct: 163 LTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVTG 198
>sp|Q12676|FOLD_YEAST Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FOL3 PE=1 SV=1
Length = 427
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRE 136
L R+ +L++ LGNP + + +HIAGT GKGS +LSS+L+ + Y +G +T+PH+ + +
Sbjct: 7 LSRITKLLEHLGNPQNSLRVLHIAGTNGKGSVCTYLSSVLQQKSYQIGKFTTPHLVHVTD 66
Query: 137 RMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIA 196
+ + N+P+ + + I+ L+ + + T FE+LT AF F
Sbjct: 67 SITIN--NKPIPLER----YQNIRLQLEALNKSHSLKCTEFELLTCTAFKYFYDVQCQWC 120
Query: 197 VIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVL 256
VIE GLGG DATN+I + A IT I +H + LG +L I+ K+GII G P +
Sbjct: 121 VIEVGLGGRLDATNVIPGANKACCGITKISLDHESFLGNTLSEISKEKAGIITEGVPFTV 180
>sp|P48760|FOLC_MOUSE Folylpolyglutamate synthase, mitochondrial OS=Mus musculus GN=Fpgs
PE=1 SV=3
Length = 587
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 98/166 (59%), Gaps = 11/166 (6%)
Query: 92 SKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSA-- 149
++ +H+ GTKGKGST AF ILR G G ++SPH+ +RER+ + +P+S
Sbjct: 94 NRLNIIHVTGTKGKGSTCAFTERILRNYGLKTGFFSSPHMVQVRERIRIN--GKPISPEL 151
Query: 150 --KALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARD 207
K CL+++++ D++ ++F LT MAF +F Q VD+AV+E G+GGA D
Sbjct: 152 FTKHFWCLYNQLEEFKDDS---HVSMPSYFRFLTLMAFHVFLQEKVDLAVVEVGIGGAFD 208
Query: 208 ATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP 253
TNII + ++++G +HT+ LG ++E IA K GI K G P
Sbjct: 209 CTNIIRKPVVCG--VSSLGIDHTSLLGDTVEKIAWQKGGIFKPGVP 252
>sp|Q8W035|FPGS3_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS3 PE=1
SV=1
Length = 492
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 87 LGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRE--RMNVGRLN 144
L + S+ K +H+AGTKGKGST F SILR G G +TSPH+ +RE R+N ++
Sbjct: 51 LEDAVSQMKIIHVAGTKGKGSTCTFAESILRCYGLRTGLFTSPHLIDVRERFRLNGIEIS 110
Query: 145 RPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGG 204
+ C FHK+K E E T+F L +AF +F VD+ ++E GLGG
Sbjct: 111 QEKFVNYFWCCFHKLK----EKTSNEVPMPTYFCFLALLAFKIFTTEQVDVVILEVGLGG 166
Query: 205 ARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP-LVLGGPFLPH 263
DATN+I + I+++G +H LG +L IA K+GI K G P + P
Sbjct: 167 RFDATNVIQKPVVCG--ISSLGYDHMEILGYTLAEIAAEKAGIFKSGVPAFTVAQP--DE 222
Query: 264 IEHILRDEASLMCS--QVVSAYDAGIRATING 293
+L ++AS + QVV D+ R + G
Sbjct: 223 AMRVLNEKASKLEVNLQVVEPLDSSQRLGLQG 254
>sp|Q8K9X3|FOLC_BUCAP Bifunctional protein FolC OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=folC PE=3 SV=1
Length = 418
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 16/209 (7%)
Query: 70 DSDDGFDLGRMNRLMDRLG--NPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYT 127
D D +L + + +LG N S F TV GT GKG+T A L +L GY VG YT
Sbjct: 19 DKKDRKNLFELKLIAKKLGLLNLKSFFFTV--GGTNGKGTTCAMLEKLLLDSGYQVGLYT 76
Query: 128 SPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFAL 187
SPH+ ER+ V L +S K H ++ +A + N +T+FE +T A L
Sbjct: 77 SPHLINYSERIKVNGL--YLSEKD-----HIFSFLIIDAEK-GNVSLTYFEFITLSALFL 128
Query: 188 FAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGI 247
F+Q +DI ++E GLGG DATNII S SVIT IG +HT+ LG +I KSGI
Sbjct: 129 FSQYSLDIIILEVGLGGRLDATNIIDSD---LSVITNIGIDHTSCLGTDRISIGREKSGI 185
Query: 248 IKYGRPLVLGGPFLP-HIEHILRDEASLM 275
+ G+ V+G +P ++ I +++ +++
Sbjct: 186 FRKGKIAVIGEKNIPISVDEIAKEKKTIL 214
>sp|O74742|FOLE_SCHPO Probable folylpolyglutamate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=met7 PE=2 SV=1
Length = 505
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 13/190 (6%)
Query: 92 SKFKTVHIAGTKGKGSTAAFLSSIL--------RAEGYSVGCYTSPHIKTIRERMNVGRL 143
++ +H+AGTKGKGST AF SSIL R+ +G YTSPH++++ ER+ +
Sbjct: 77 NRLNVIHVAGTKGKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQLN-- 134
Query: 144 NRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLG 203
+P+S + F + L+ A+ ++ +F LT MA+ +F +VD A+IE G+G
Sbjct: 135 GKPISQELFTKYFFDVWERLENAVGSDSEKPMYFRFLTLMAWHVFISENVDAAIIEVGIG 194
Query: 204 GARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVLGGPFLPH 263
G D+TN+I A+ +T++G +HT+ LG ++ IA K+GI K + L P
Sbjct: 195 GEYDSTNLIEKP--YATAVTSLGLDHTSLLGNTIAEIAWQKAGIYKES-AIALTCEQAPE 251
Query: 264 IEHILRDEAS 273
++L++ A+
Sbjct: 252 AMNVLKNRAA 261
>sp|Q9UTD0|FOLD_SCHPO Probable folylpolyglutamate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fol3 PE=3 SV=1
Length = 417
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRE 136
L RM +L+ LGNP F V IAGT GKGS +++ + L G YTSPH R+
Sbjct: 7 LQRMLQLLKHLGNPQESFCAVQIAGTNGKGSICSYIYTSLLQAAIKTGRYTSPHFLEPRD 66
Query: 137 RMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIA 196
+++ + S + N + ++ V D R + T FE+LTA AF F + V +A
Sbjct: 67 TISIN--GQIASEEIFNTCWKQVIEV-DRRFRTK---ATEFELLTATAFQCFHHSGVRVA 120
Query: 197 VIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVL 256
VIE G+GG DATN+ L S+I+ I +H A LG +LE IA K+GI K P V+
Sbjct: 121 VIETGMGGRLDATNVFEEPVL--SIISRICLDHQAFLGNTLEAIAKEKAGIFKKNVPCVV 178
Query: 257 GG 258
G
Sbjct: 179 DG 180
>sp|P43775|FOLC_HAEIN Folylpolyglutamate synthase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=folC PE=3 SV=1
Length = 437
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRE 136
L R+ + ++L H + + GT GKG+T L +IL G VG Y+SPH+ E
Sbjct: 31 LDRIKSVAEKLDLLHPVPYVITVGGTNGKGTTCRLLETILLNHGLRVGVYSSPHLLRYNE 90
Query: 137 RMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIA 196
R+ + + P A + F +DE + +T+FE T A LF Q +D+
Sbjct: 91 RVRIQNQDLPDEAHTASFAF------IDEN---KTESLTYFEFSTLSALHLFKQAKLDVV 141
Query: 197 VIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVL 256
++E GLGG DATNI+ S +VIT+I +HT LG + E IA K+GI + P+V+
Sbjct: 142 ILEVGLGGRLDATNIVDSH---LAVITSIDIDHTDFLGDTREAIAFEKAGIFRENCPVVI 198
Query: 257 GGPFLPHIEHILRDEASLMCSQV 279
G P +P + D+A + QV
Sbjct: 199 GEPNVP---QTMLDQAEKLHCQV 218
>sp|F4J2K2|FPGS2_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS2 PE=1
SV=1
Length = 625
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 121/261 (46%), Gaps = 38/261 (14%)
Query: 93 KFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKAL 152
+ K +H+AGTKGKGST F +ILR G+ G +TSPH+ +RER + L+ +S +
Sbjct: 130 ELKVIHVAGTKGKGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFRIDGLD--ISEEKF 187
Query: 153 NCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNII 212
F + +L E F+ LT +AF +F VD+AVIE GLGG D+TN+I
Sbjct: 188 LQYFWECWKLLKEKAVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVGLGGKLDSTNVI 247
Query: 213 SSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
+ I ++G +H LG +L IA K+GI K P +P
Sbjct: 248 QKPVVCG--IASLGMDHMDILGNTLADIAFHKAGIFK---------PQIP---------- 286
Query: 273 SLMCSQVVSAYDAGIRATINGLSMFNDRPCQSCDIIVQAERDLKLSIELLD-VKLCMIGN 331
+ Q+ A D ++ T N L V E L + LD V L + G+
Sbjct: 287 AFTVPQLSEAMDV-LQKTANNLE-------------VPLEVVAPLEPKKLDGVTLGLSGD 332
Query: 332 HQLHNALTATCAALCLRDQGG 352
HQL NA A + C + G
Sbjct: 333 HQLVNAGLAVSLSRCWLQRTG 353
>sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1
SV=1
Length = 571
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 93 KFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKAL 152
K +H+AGTKGKGST F SI+R G+ G +TSPH+ +RER + ++ +S +
Sbjct: 111 KMNVIHVAGTKGKGSTCTFTESIIRNYGFRTGLFTSPHLIDVRERFRLDGVD--ISEEKF 168
Query: 153 NCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNII 212
F L E E T+F L +AF +FA VD A++E GLGG DATN +
Sbjct: 169 LGYFWWCYNRLKERTNEEIPMPTYFRFLALLAFKIFAAEEVDAAILEVGLGGKFDATNAV 228
Query: 213 SSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP 253
+ I+++G +H LG +L IA K+GI K G P
Sbjct: 229 QKPVVCG--ISSLGYDHMEILGDTLGKIAGEKAGIFKLGVP 267
>sp|Q9Y893|FOLE_CANAX Folylpolyglutamate synthase OS=Candida albicans GN=MET7 PE=3 SV=1
Length = 514
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 49 MNYLDSLK-NFEKSGVPKGAGTDSD-DGFDLGRMNRLMDRLG---NPHSKFKTVHIAGTK 103
+N L+SL+ NF K G + + + ++ RLG +K +HI GTK
Sbjct: 22 INALNSLQSNFASIEATKKLGPSVNRNELSINEVHEFTKRLGYTPTDFNKLNIIHITGTK 81
Query: 104 GKGSTAAFLSSILRAEGYS-VGCYTSPHIKTIRERMNVGRLN-RPVSAKALNCLFHKIKG 161
GKGST AF SIL+ S +G YTSPH+K++RER+ R+N +P++ + F ++
Sbjct: 82 GKGSTCAFTESILKQYTISKIGLYTSPHLKSVRERI---RINGQPINQEKFAKYFFEVWD 138
Query: 162 VLDEAIRLENGCIT----------HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNI 211
C T +F+ LT ++F +F Q VD A+ E G+GG D+TNI
Sbjct: 139 KFTTTKSDPQECPTLQPCDQVKPMYFKYLTILSFHVFLQEGVDTAIYEVGVGGTYDSTNI 198
Query: 212 ISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRP 253
I + I+ +G +HT LG ++ +I K+GI K G P
Sbjct: 199 IDKPTVTG--ISALGIDHTFMLGNNIASITENKTGIFKKGVP 238
>sp|P08192|FOLC_ECOLI Bifunctional protein FolC OS=Escherichia coli (strain K12) GN=folC
PE=1 SV=2
Length = 422
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 75 FDLG--RMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIK 132
DLG R++ + RLG +AGT GKG+T L SIL A GY VG Y+SPH+
Sbjct: 28 IDLGLERVSLVAARLGVLKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLV 87
Query: 133 TIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNH 192
ER+ V P SA + F +I+ + +T+FE T A LF Q
Sbjct: 88 RYTERVRVQGQELPESAHTAS--FAEIESARGDI------SLTYFEYGTLSALWLFKQAQ 139
Query: 193 VDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGR 252
+D+ ++E GLGG DATNI+ + +V+T+I +HT LG E+I K+GI + +
Sbjct: 140 LDVVILEVGLGGRLDATNIVDAD---VAVVTSIALDHTDWLGPDRESIGREKAGIFRSEK 196
Query: 253 PLVLGGPFLPH-IEHILRDEASLM 275
P ++G P +P I + +++ +L+
Sbjct: 197 PAIVGEPEMPSTIADVAQEKGALL 220
>sp|Q54CY5|FOLC_DICDI Putative folylpolyglutamate synthase OS=Dictyostelium discoideum
GN=folC PE=3 SV=1
Length = 626
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 97 VHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKAL---- 152
+H+AGTKGKGST A SI+R +G+S G +TSPH+ + RER+ R+N + +K +
Sbjct: 137 IHVAGTKGKGSTCAITESIIREQGFSTGLFTSPHLISPRERI---RINGEMISKEMFSQY 193
Query: 153 --NCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATN 210
NC IK D +L N F LT MA +F + ++E G+GG D+TN
Sbjct: 194 FWNCWDLLIK---DYQTQLPN----FFRYLTLMALKIFQDEAIQCTILEVGIGGRMDSTN 246
Query: 211 IISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRD 270
+ + I+ +G +H LG +L IA+ K+GI+K G P+ LP ++L D
Sbjct: 247 VFPKPMVTG--ISALGYDHQNLLGNTLAEIALEKAGIMKVGIPIFTVSSQLPEAINVLID 304
Query: 271 EAS 273
++
Sbjct: 305 HSN 307
>sp|E7Q9C7|FOLE_YEASB Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
FostersB) GN=MET7 PE=3 SV=2
Length = 548
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|E7KIA3|FOLE_YEASA Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
AWRI796) GN=MET7 PE=3 SV=2
Length = 548
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|E7NMM0|FOLE_YEASO Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
FostersO) GN=MET7 PE=3 SV=2
Length = 548
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|E7QKX4|FOLE_YEASZ Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
Zymaflore VL3) GN=MET7 PE=3 SV=2
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|Q08645|FOLE_YEAST Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MET7 PE=1 SV=1
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|E7KUJ4|FOLE_YEASL Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
Lalvin QA23) GN=MET7 PE=3 SV=2
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|C8ZGZ3|FOLE_YEAS8 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=MET7 PE=3 SV=1
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|A6ZP80|FOLE_YEAS7 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
YJM789) GN=MET7 PE=3 SV=1
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|B5VSC3|FOLE_YEAS6 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=MET7 PE=3 SV=2
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|B3LJR0|FOLE_YEAS1 Folylpolyglutamate synthase OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=MET7 PE=3 SV=1
Length = 548
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKT---VHIAGTKGKGSTAAFLSSIL---RAEGYSV 123
D + L M+ R+G S F VHI GTKGKGSTAAF SSIL + + +
Sbjct: 93 DRKNTMTLLEMHEWSRRIGYSASDFNKLNIVHITGTKGKGSTAAFTSSILGQYKEQLPRI 152
Query: 124 GCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR--------LENGCIT 175
G YTSPH+K++RER+ + P+S + F ++ LD +
Sbjct: 153 GLYTSPHLKSVRERIRIN--GEPISEEKFAKYFFEVWDRLDSTTSSLDKFPHMIPGSKPG 210
Query: 176 HFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG 235
+F+ LT ++F F Q V E G+GG D+TNII + +T +G +HT LG
Sbjct: 211 YFKFLTLLSFHTFIQEDCKSCVYEVGVGGELDSTNIIEKPIVCG--VTLLGIDHTFMLGD 268
Query: 236 SLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
++E IA K GI K G P P IL++ A
Sbjct: 269 TIEEIAWNKGGIFKSGAPAFTVEKQPPQGLTILKERA 305
>sp|Q09509|FOLC_CAEEL Putative folylpolyglutamate synthase OS=Caenorhabditis elegans
GN=F25B5.6 PE=2 SV=1
Length = 510
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 97 VHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLF 156
+H++GTKGKGS AF+ SILR++G G Y+SPH+ +RER+ V +PVS + F
Sbjct: 91 IHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVD--GQPVSEQMFAEEF 148
Query: 157 HKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSG 216
+ ++ + +F+ LT +AF +F + +V + ++E G+GG D TN++
Sbjct: 149 FHVYDIIKR--EHSDNMPAYFKFLTLLAFRIFVKLNVQVMILEVGIGGEYDCTNVVEKPK 206
Query: 217 LAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA---- 272
+ +TT+ +H + LG L IA K+GI K P P E +L A
Sbjct: 207 VCG--VTTLDYDHMSILGNKLSEIAWHKAGIFKESVP-AFYSPTTTEAEEVLIARAISKH 263
Query: 273 -SLMCSQVVSAYDAG--IRATINGLSMFND 299
L + VSAY I I G F++
Sbjct: 264 VPLFQTPPVSAYQFARDISPGIRGAHQFSN 293
>sp|O13492|FOLE_NEUCR Folylpolyglutamate synthase OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=met-6 PE=1 SV=2
Length = 528
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 24 FKKFSIGSKSCFFSTSSEEPELMNFMNYLDSLKNFEKS----GVPKGAGTDSDDGFDLGR 79
+ +I FF+ + + + +D+L + + + AG D +
Sbjct: 18 LRSLTITHHHLFFTKRTMASSARTYNDAIDALNSLQTPFAVIEARRKAGI-RPDAHSVKE 76
Query: 80 MNRLMDRLG---NPHSKFKTVHIAGTKGKGSTAAFLSSIL----RAEGYS--VGCYTSPH 130
M + R+G + VH+AGTKGKG T AF+ SIL R G +G +TSPH
Sbjct: 77 MRAYLARIGYSSQDLDRLNIVHVAGTKGKGGTCAFVDSILTRHQRTHGIPRRIGLFTSPH 136
Query: 131 IKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEV----------- 179
+ +RER+ + ++P+S + F ++ RLE + EV
Sbjct: 137 LIAVRERIRID--SKPISEELFARYFFEVWD------RLETSQLAKDEVELGSKPIYARY 188
Query: 180 LTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLET 239
LT M++ ++ VD+A+ E G+GG DATN++ S I+T+G +H LG +++
Sbjct: 189 LTLMSYHVYLSEGVDVAIYETGIGGEYDATNVVDRP--VVSGISTLGIDHVFVLGDTVDK 246
Query: 240 IAMAKSGIIKYGRPLVLGGPFLPHIEHILRDEA 272
IA K+GI+K G P +P +L+D A
Sbjct: 247 IAWHKAGIMKTGSP-AFTIEQVPSATQVLKDRA 278
>sp|Q89AT2|FOLC_BUCBP Bifunctional protein FolC OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=folC PE=3 SV=1
Length = 426
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 73 DGFD--LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPH 130
D D L R+ + +LG SK + GT GKGST L ++L GY VG YTSPH
Sbjct: 25 DNIDPTLNRVFYVAKKLGVLKSKAFVFIVGGTNGKGSTCHVLENLLLNSGYRVGLYTSPH 84
Query: 131 IKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQ 190
+ ER+ + L L+H I D + +T FE +T A LF
Sbjct: 85 LMRYTERVRINGF-------ELEHLYH-ISAFNDVKYFQNDVLLTRFEFITLSALILFKS 136
Query: 191 NHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKY 250
++DI ++E GLGG DATNI+S+ SVIT I +H+ LG + +I++ KSGI +
Sbjct: 137 YNLDIIILEVGLGGRLDATNILSAD---VSVITNIDIDHSKILGVNRSSISVEKSGIFRK 193
Query: 251 GRPLVLGGPFLPHIEHIL 268
+ ++ P + L
Sbjct: 194 NKIAIVADNNFPKVAQYL 211
>sp|P57265|FOLC_BUCAI Bifunctional protein FolC OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=folC PE=3 SV=1
Length = 411
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 70 DSDDGFDLGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSP 129
D ++L + L +LG S+ +AGT GKG+T A L +L GY VG YTSP
Sbjct: 19 DKKRIYNLTELKFLAKKLGLLKSESFIFTVAGTNGKGTTCAVLERLLLDSGYQVGLYTSP 78
Query: 130 HIKTIRERMNVGRLNRPVSAKALNC-LFHKIKGVLDEAIRLENGC-ITHFEVLTAMAFAL 187
H+ ER+ R+N V + + F + E +R NG +T+FE +T A L
Sbjct: 79 HLINFVERV---RINGFVLHEEEHIDSFQNV-----ELVR--NGVLLTYFEFITLAALIL 128
Query: 188 FAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGI 247
F + +D +++ GLGG DATN S+IT IG +HT+ LG +IA K G+
Sbjct: 129 FKRYSLDCIILKVGLGGRLDATN---IIDSDISIITNIGIDHTSILGRDRISIAREKCGV 185
Query: 248 IKYGRPLVLGGPFLP 262
+ + V+G +P
Sbjct: 186 FRKNKISVIGETDIP 200
>sp|P36001|FOLC_YEAST Probable folylpolyglutamate synthase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RMA1 PE=1 SV=1
Length = 430
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYS-----VGCYTSPHI 131
L R+NRL++ +GNP +HIAGT GK + + FL+SIL+ G +G YT+ +
Sbjct: 10 LPRINRLLEHVGNPQDSLSILHIAGTNGKETVSKFLTSILQHPGQQRQRVLIGRYTTSSL 69
Query: 132 KTIRERMNVGRLNRPVSAKALNCL-FHKIKGVL---DEAIRLENGCITHFEVLTAMAFAL 187
+N + ++ +A++ + + +I+ L D +++L+ + E+LT++A
Sbjct: 70 ------LNAKEEDISINNEAISLIEYSRIEKELIEADSSLKLQ---CNNLELLTSVALVY 120
Query: 188 FAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSG 246
FA+ + +IE GL G +D +II+ IT +G A L L I + +
Sbjct: 121 FAKKNCQWCIIETGLAGKQDPGSIIAGQSRVCCAITNVGISDEAFLCKFLSQITESSTN 179
>sp|Q8PXF3|SRP54_METMA Signal recognition particle 54 kDa protein OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=srp54 PE=3 SV=1
Length = 443
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 93 KFKTVHIAGTKGKGST--AAFLSSILRAEGYSVGCYTSP--------HIKTIRERMNVGR 142
K +T+ + G +G G T AA L+ + +G G + +KT+ E++NVG
Sbjct: 96 KPQTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGF 155
Query: 143 LNRPVSAKALNCLFHKIKG-------VLDEAIR--LENGCITHFEVLTAMAFALFAQNHV 193
+ A+ H +K ++D A R LE I E + A+A +H
Sbjct: 156 YGEEGNPDAVEITIHGLKALEKYDIKIVDTAGRHALEADLIEEMERIHAVA----KPDH- 210
Query: 194 DIAVIEAGLG--GARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGI 247
V++AG+G ++ A S G+ +IT + + TA GG+L ++ K+ I
Sbjct: 211 KFMVLDAGIGQQASQQAHAFNDSVGITGVIITKL--DGTAKGGGALSAVSETKAPI 264
>sp|Q8A254|MURE_BACTN UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=murE
PE=3 SV=1
Length = 482
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTS 128
GNP S+F+ V + GT GK + A L + R GY VG ++
Sbjct: 98 GNPTSQFELVGVTGTNGKTTIATLLYNTFRYFGYKVGLIST 138
>sp|Q8XJ99|MURE_CLOPE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Clostridium perfringens (strain 13 / Type A)
GN=murE PE=3 SV=1
Length = 484
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 87 LGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVG 124
GNP K K + I GT GK ++A + SIL G+ G
Sbjct: 96 FGNPKDKLKIIGITGTNGKTTSAFIIKSILEKAGFMTG 133
>sp|Q64ZL7|MURE_BACFR UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacteroides fragilis (strain YCH46) GN=murE
PE=3 SV=1
Length = 485
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTS 128
GNP SK + V + GT GK + A L + R GY VG ++
Sbjct: 98 GNPSSKLELVGVTGTNGKTTIATLLYNTFRYFGYKVGLIST 138
>sp|Q5LIJ3|MURE_BACFN UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC
9343) GN=murE PE=3 SV=1
Length = 485
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTS 128
GNP SK + V + GT GK + A L + R GY VG ++
Sbjct: 98 GNPSSKLELVGVTGTNGKTTIATLLYNTFRYFGYKVGLIST 138
>sp|Q894B7|MURE_CLOTE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Clostridium tetani (strain Massachusetts /
E88) GN=murE PE=3 SV=1
Length = 485
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVG 124
GNP K K + + GT GK ++ + SIL G+ VG
Sbjct: 100 GNPKDKLKLIGVTGTNGKTTSTFMIKSILEEAGFKVG 136
>sp|Q97H84|MURE1_CLOAB UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase 1 OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=murE1
PE=3 SV=1
Length = 482
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 89 NPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVG 124
NP K K + I GT GK ++ + S+L + GY VG
Sbjct: 98 NPSHKLKLIGITGTNGKTTSTYMMKSMLESSGYKVG 133
>sp|A5I1T6|MURE_CLOBH UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A) GN=murE PE=3 SV=1
Length = 483
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVG 124
GNP K + I GT GK ++ + +IL GY VG
Sbjct: 99 GNPSKHIKIIGITGTNGKTTSTFMMKAILEKAGYKVG 135
>sp|A7FTY1|MURE_CLOB1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Clostridium botulinum (strain ATCC 19397 /
Type A) GN=murE PE=3 SV=1
Length = 483
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVG 124
GNP K + I GT GK ++ + +IL GY VG
Sbjct: 99 GNPSKHIKIIGITGTNGKTTSTFMMKAILEKAGYKVG 135
>sp|Q0A6J7|MURE_ALHEH UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Alkalilimnicola ehrlichei (strain MLHE-1)
GN=murE PE=3 SV=1
Length = 498
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 32/134 (23%)
Query: 53 DSLKNFEKSGVPKGAGTDSDDGFDLGR-MNRLMDRL-GNPHSKFKTVHIAGTKGKGSTAA 110
D E++GVP A D LGR + + RL G+P ++ + V + GT GK S
Sbjct: 76 DERTAAERAGVPLIAVPD------LGRRLGPIAARLYGDPSARMRVVGVTGTDGKTSVTQ 129
Query: 111 FLSSILRAEGY----------------SVGCYTSPHIKTIRE------RMNVGRLNRPVS 148
+L+ +L E + G +T+P +++ R ++ VS
Sbjct: 130 YLAQLLDREAHRCGLVGTLGSGFPDSLQPGTHTTPDAASVQRTLARLHRQGAAQVAMEVS 189
Query: 149 AKALNCLFHKIKGV 162
+ AL+ H++ GV
Sbjct: 190 SHALDQ--HRVAGV 201
>sp|Q11RG9|MURE_CYTH3 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469) GN=murE PE=3 SV=1
Length = 486
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 89 NPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVS 148
+P SK K V + GT GK +T L + R GY G ++ ++ I E V +
Sbjct: 100 SPSSKLKLVGVTGTNGKTTTVTLLYRLFRKLGYKTGLLST--VENIIEDKVVQATHTTPD 157
Query: 149 AKALNCLF 156
A +LN L
Sbjct: 158 AISLNKLL 165
>sp|A6L075|MURE_BACV8 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM
1447 / NCTC 11154) GN=murE PE=3 SV=1
Length = 484
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTS 128
G+P SK + V + GT GK + A L ++ R GY G ++
Sbjct: 98 GDPTSKLELVGVTGTNGKTTIATLLYNMFRKFGYKTGLIST 138
>sp|Q819Q0|MURE_BACCR UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31)
GN=murE PE=3 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPV 147
G P K + I GT GK +T+ + I+RA G+ G + ++K E V N
Sbjct: 95 GQPTHKLHLIGITGTNGKTTTSHIMDEIMRAHGHKTGLIGTINMKIGDETFEVK--NTTP 152
Query: 148 SAKALNCLFHKI 159
A L F K+
Sbjct: 153 DALTLQQTFSKM 164
>sp|Q81WC7|MURE_BACAN UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacillus anthracis GN=murE PE=3 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNV 140
G P K + I GT GK +T+ + I+RA G+ G + ++K E V
Sbjct: 95 GQPTHKLHLIGITGTNGKTTTSHIMDEIMRAHGHKTGLIGTINMKIGDETFEV 147
>sp|A9JRI0|HEAT6_DANRE HEAT repeat-containing protein 6 OS=Danio rerio GN=heatr6 PE=2 SV=1
Length = 1201
Score = 33.1 bits (74), Expect = 4.1, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 270 DEASLMCSQVVSAYDAGIRATINGLSMFNDRPCQSCDIIVQAERDLKLSIELLDVKLCMI 329
D ASL +++ +D I + + N P C+I+VQA R + LS E L +KLC +
Sbjct: 65 DSASLK-TELNLLFDELISENYSSSNHDNIPPEVVCEILVQASRLVPLSQEHLIIKLCQM 123
Query: 330 GNHQLHNAL 338
HQL N L
Sbjct: 124 -IHQLLNQL 131
>sp|Q03523|MURE_BACSU UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Bacillus subtilis (strain 168) GN=murE PE=3
SV=1
Length = 494
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 101/271 (37%), Gaps = 65/271 (23%)
Query: 88 GNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPV 147
G P K + + I GT GK ST + IL+ G G + ++K +G PV
Sbjct: 96 GQPTKKLQLIGITGTNGKTSTTHMVDEILKKAGKRTGLIGTMYMK-------IGDETLPV 148
Query: 148 SAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEA---GLGG 204
K E++ L+ F HVD A++E L
Sbjct: 149 ------------KNTTPESVTLQK------------TFKKMNDKHVDTAIMEVSSHALSL 184
Query: 205 ARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPLVLGGPFLPHI 264
R + +V T + ++H +++ AKS + LGG F +
Sbjct: 185 GR-----VHGCDYDIAVFTNLTQDHL-DYHKTMDEYRHAKSLLFSQ-----LGGAF--NH 231
Query: 265 EHILR------DEASLMCSQVVSAYDAGIRATINGLSMFNDRPCQSCDIIVQAER---DL 315
EH R DEAS +V +A+ I+ + ND + +I + A+ DL
Sbjct: 232 EHPKRAVLNADDEASAYFEKVTAAH-------ISTYGIKNDADVMAKNISITAQGTSFDL 284
Query: 316 KLSIELLDVKLCMIGNHQLHNAL--TATCAA 344
+ + + ++G ++N L ATC A
Sbjct: 285 VTNKGTKHITMSLVGQFNVYNVLAAVATCIA 315
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,865,285
Number of Sequences: 539616
Number of extensions: 5582508
Number of successful extensions: 14471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 14349
Number of HSP's gapped (non-prelim): 63
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)