Your job contains 1 sequence.
>017062
MVLEPNGAVWMEGEEEQPLSVSWTTAAAATATTTARATTEPKEDEMHVNAVSLSGFKSIL
DTDWFLNSTLNNPPQDFTNTTGLLETHQELRAFNAFQETNLFFQPIESHPFTLNPTHSLL
PPNNNDNNSNSHLPFVSGFDLGGEAAGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSN
CFDNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL
LQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIR
EGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVL
PKQIKSVLLDTAGFHDVM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017062
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 805 4.5e-84 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 761 1.7e-75 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 355 1.8e-32 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 355 1.8e-32 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 238 3.4e-32 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 341 5.4e-31 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 313 2.2e-27 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 197 4.8e-17 2
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 199 1.3e-14 2
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 187 3.0e-14 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 192 1.3e-12 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 189 2.0e-12 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 182 3.3e-12 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 185 5.1e-12 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 184 5.8e-12 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 166 6.7e-12 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 179 1.8e-11 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 174 2.4e-11 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 183 2.7e-11 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 180 5.0e-11 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 163 5.4e-11 2
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 160 8.9e-11 2
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 172 9.7e-11 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 171 1.4e-10 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 158 2.9e-10 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 166 4.6e-10 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 172 5.2e-10 1
UNIPROTKB|Q5Z988 - symbol:P0548E04.5 "Os06g0724800 protei... 151 2.5e-09 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 162 2.8e-09 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 162 4.4e-09 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 158 4.6e-09 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 147 5.1e-09 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 150 5.2e-09 3
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 163 5.4e-09 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 158 5.4e-09 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 162 7.5e-09 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 156 1.0e-08 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 153 1.0e-08 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 160 1.1e-08 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 130 3.9e-08 2
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 153 3.9e-08 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 152 5.8e-08 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 151 7.2e-08 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 149 7.7e-08 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 112 9.0e-08 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 150 1.0e-07 1
UNIPROTKB|Q8LII5 - symbol:OJ1167_G06.116 "Putative unchar... 93 1.0e-07 2
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 118 3.6e-07 2
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 138 1.0e-06 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 136 1.8e-06 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 119 1.9e-06 2
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 135 2.1e-06 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 137 2.4e-06 2
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 136 2.9e-06 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 132 3.9e-06 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 108 4.7e-06 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 131 5.8e-06 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 129 6.3e-06 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 133 7.7e-06 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 126 9.5e-06 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 124 1.0e-05 2
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 130 1.2e-05 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 131 1.2e-05 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 128 1.2e-05 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 131 1.4e-05 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 124 1.5e-05 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 129 1.6e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 126 2.5e-05 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 105 3.3e-05 1
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 124 3.6e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 124 3.9e-05 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 124 7.2e-05 2
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 124 7.3e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 117 8.3e-05 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 123 8.9e-05 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 121 9.7e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 123 0.00010 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 123 0.00010 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 122 0.00012 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 109 0.00015 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 114 0.00016 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 121 0.00016 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 122 0.00017 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 120 0.00018 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 107 0.00023 2
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 118 0.00023 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 110 0.00029 1
UNIPROTKB|Q10LR1 - symbol:Os03g0338400 "BHLH transcriptio... 107 0.00034 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 113 0.00046 1
TAIR|locus:2828302 - symbol:AT2G40435 species:3702 "Arabi... 105 0.00050 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 111 0.00053 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 97 0.00062 3
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 117 0.00066 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 114 0.00071 2
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 112 0.00074 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 113 0.00085 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 114 0.00089 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 110 0.00097 1
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 805 (288.4 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 157/193 (81%), Positives = 174/193 (90%)
Query: 186 EGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 245
+GK+KG+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN
Sbjct: 298 KGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 357
Query: 246 DLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRS----PTGEAARVEVRIRE 301
DLHNELESTP GSL S+S P+TPTP TL CRVKEE+ S P G+ ARVEVR+RE
Sbjct: 358 DLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLRE 417
Query: 302 GRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLP 361
GRAVNIHMFC RRPGLLL+TM+ALD+LGLD+QQAVISCFNGFALDVFRAEQC+EGQ++LP
Sbjct: 418 GRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILP 477
Query: 362 KQIKSVLLDTAGF 374
QIK+VL DTAG+
Sbjct: 478 DQIKAVLFDTAGY 490
Score = 56 (24.8 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 54 SGFKSILDTDWFLNSTLNNP-PQDFTNTTGLLETHQELRAFNAF 96
S FK +L+ DWF + N P PQD +L+ + R F F
Sbjct: 37 SQFKPMLEGDWFSS---NQPHPQDLQ----MLQNQPDFRYFGGF 73
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 154/241 (63%), Positives = 187/241 (77%)
Query: 143 GEAAGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMAERR 202
G+ G ASG + + DS ++ S + +GK+KG+PAKNLMAERR
Sbjct: 284 GDDDGLSIDASGGLNYDSEDARGGEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERR 343
Query: 203 RRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQP 262
RRKKLNDRLYMLRSVVPKISKMDRASILGDAI+YLKELLQ+INDL NELES+P S + P
Sbjct: 344 RRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESSPATSSLPP 403
Query: 263 S-TSIQPMTPTPPTLPCRVKEEISRS----PTGEAARVEVRIREGRAVNIHMFCARRPGL 317
+ TS P+TPT PTLP R+KEEI S PTG+ RVEVR+REGRAVNIHMFCARRPGL
Sbjct: 404 TPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVEVRLREGRAVNIHMFCARRPGL 463
Query: 318 LLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLLDTAGFHDV 377
LLS MRA++ LGLD+QQAVISCFNGF LD+F+AEQC++G +LP++IK+VL+ +AGFH +
Sbjct: 464 LLSAMRAVEGLGLDVQQAVISCFNGFTLDIFKAEQCKDGPGLLPEEIKAVLMQSAGFHTM 523
Query: 378 M 378
+
Sbjct: 524 I 524
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 87/191 (45%), Positives = 119/191 (62%)
Query: 191 GLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 250
G P+KNLMAERRRRK+LNDRL MLRSVVP+ISKMDR SILGD I Y+KEL+ RI +L E
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
Query: 251 LESTPTGSLMQPSTSIQPMTPT--PPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIH 308
+ + S + S+ + PP+ + + R+ T R EV RE + I
Sbjct: 252 AATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNST----RFEVERRENGSTRIE 307
Query: 309 MFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDV--FRAEQCRE-GQDVLPKQIK 365
M CA P LL ST+ AL++LG++I+Q VISCF+ FA+ + ++ RE +D ++IK
Sbjct: 308 MACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDT--EEIK 365
Query: 366 SVLLDTAGFHD 376
L +AG+ D
Sbjct: 366 QTLFRSAGYGD 376
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 85/187 (45%), Positives = 112/187 (59%)
Query: 188 KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 247
K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAIDY+KELL +IN L
Sbjct: 171 KLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKL 230
Query: 248 HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNI 307
+E + + S + P + SP E R + E V+I
Sbjct: 231 QDEEQELGNSNNSHHSKLFGDLKDLNANEPL-----VRNSPKFEIDRRD----EDTRVDI 281
Query: 308 HMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSV 367
C+ +PGLLLST+ L++LGL+I+Q VISCF+ F+L +E + + + IK
Sbjct: 282 --CCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQA 339
Query: 368 LLDTAGF 374
L AG+
Sbjct: 340 LFRNAGY 346
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 238 (88.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 47/71 (66%), Positives = 58/71 (81%)
Query: 188 KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 247
K +G P+KNLMAERRRRK+LNDRL +LRS+VPKI+KMDR SILGDAIDY+KELL +IN L
Sbjct: 144 KLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKL 203
Query: 248 HNELESTPTGS 258
+ + + S
Sbjct: 204 QEDEQELGSNS 214
Score = 130 (50.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 303 RAVNIHM--FCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVL 360
R VN H+ C +PGL++ST+ L++LGL+I+Q VISCF+ F+L E + V
Sbjct: 237 REVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT 296
Query: 361 PKQIKSVLLDTAGF 374
+ K L+ AG+
Sbjct: 297 SEATKQALIRNAGY 310
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/187 (43%), Positives = 109/187 (58%)
Query: 188 KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 247
K G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGD IDY+KEL +RI L
Sbjct: 175 KLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTL 234
Query: 248 HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNI 307
E+ TP + + + E + R+ T + +V R I
Sbjct: 235 EEEIGVTPE--------ELDLLNTMKDSSSGNNNEMLVRNST----KFDVENRGSGNTRI 282
Query: 308 HMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSV 367
+ C PG+LLST+ AL+ LGL+I+Q V+SCF+ F + ++ + Q V +IK
Sbjct: 283 EICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIKQT 342
Query: 368 LLDTAGF 374
L +AG+
Sbjct: 343 LFRSAGY 349
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 313 (115.2 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 91/247 (36%), Positives = 131/247 (53%)
Query: 151 PASGFMGLTTTQICATNDSDFHGFG--SSYSNCFDNLEG------KRK---GLPAKNLMA 199
P G L + ND D + G S S+C D ++ K+K G AKNLMA
Sbjct: 259 PVIGEPSLLVNEQQVVNDKDMNENGRVDSGSDCSDQIDDEDDPKYKKKSGKGSQAKNLMA 318
Query: 200 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES---TPT 256
ERRRRKKLNDRLY LRS+VP+I+K+DRASILGDAI+Y+KEL +L +ELE T
Sbjct: 319 ERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETED 378
Query: 257 GSLM-QPSTSIQPMTPTP--PTLPCR-----VKEEISRSPTGEAAR-----VEVRIREGR 303
GS Q S+ T P L C VK+++ + + + V+V +GR
Sbjct: 379 GSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGR 438
Query: 304 AVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQ 363
+ + C +PG M ALDSLGL++ A + + +VF+ E+ + + V +
Sbjct: 439 EFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEK-NDNEMVQAEH 497
Query: 364 IKSVLLD 370
+++ LL+
Sbjct: 498 VRNSLLE 504
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 197 (74.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 41/66 (62%), Positives = 50/66 (75%)
Query: 187 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
G K KNL AER+RRKKLN LY LRS+VP I+KMDRASILGDAIDY+ L +++ +
Sbjct: 277 GGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKE 336
Query: 247 LHNELE 252
L +ELE
Sbjct: 337 LQDELE 342
Score = 79 (32.9 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 27/129 (20%), Positives = 57/129 (44%)
Query: 247 LHNELESTPTGSLMQPSTSIQPMTPTPPTL-PCRVKEEISRSPTGE---AARVEVRIREG 302
L N+ S P QP ++ + P +++ G ++EVR +G
Sbjct: 366 LDNDDASPPNSHQQQPPLAVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQG 425
Query: 303 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQ-DVLP 361
+ + + +PG + M A+++LGL++ ++ + L+VFR R+ + V
Sbjct: 426 NELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRV-MVRDSEVAVQA 484
Query: 362 KQIKSVLLD 370
+++ LL+
Sbjct: 485 DRVRDSLLE 493
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 199 (75.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 195 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 254
++++AER+RR+KL+ R L +VP + KMD+AS+LGDAI Y+K+L ++ L E
Sbjct: 181 EHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRR 240
Query: 255 PTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARR 314
P + + S Q C + + G +E R+ E R V + + C R
Sbjct: 241 PVEAAVLVKKS-QLSADDDDGSSCDENFDGGEATAG-LPEIEARVSE-RTVLVKIHCENR 297
Query: 315 PGLLLSTMRALDSLGLDIQQAVISCFNGFALDV 347
G L++ + ++++GL I + F +LD+
Sbjct: 298 KGALITALSEVETIGLTIMNTNVLPFTSSSLDI 330
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 62 TDWFLNSTLNNPPQDFT-NTTGLLETHQELRAFNAF 96
T WF N ++ P + GLLE + E + AF
Sbjct: 3 TQWFSNMVMDEPSFFHQWQSDGLLEQYTEQQIAVAF 38
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 187 (70.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 54/179 (30%), Positives = 86/179 (48%)
Query: 190 KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN 249
K +KNL AERRRR +LN ++ LR+VVPKI+KM + + L DAI+++K L + +L
Sbjct: 60 KEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQR 119
Query: 250 ELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHM 309
+L +P G + S PT + ++ G + N+ +
Sbjct: 120 QLGDSP-GEAWEKQGSASCSESFVPTENAHYQGQVELISLGSSK-----------YNLKI 167
Query: 310 FCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVL 368
F +R GL + AL S + + F G+A F E E QDV+ +++S+L
Sbjct: 168 FWTKRAGLFTKVLEALCSYKVQVLSLNTISFYGYAESFFTIEVKGE-QDVVMVELRSLL 225
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 49/146 (33%), Positives = 83/146 (56%)
Query: 188 KRKGLPA--KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 245
K K PA ++ AE++RR+KLN R Y LR++VPK+S+MD+AS+L DA+ Y++ L +I+
Sbjct: 240 KEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKID 299
Query: 246 DLHNELES---TPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRI-RE 301
DL E++ T T L S++ +P ++ +V ++ S+S G V+V+I E
Sbjct: 300 DLETEIKKMKMTETDKLDNSSSNT-----SPSSVEYQVNQKPSKSNRGSDLEVQVKIVGE 354
Query: 302 GRAVNIHMFCARRP-GLLLSTMRALD 326
+ + P L+S + +D
Sbjct: 355 EAIIRVQTENVNHPTSALMSALMEMD 380
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 189 (71.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 52/154 (33%), Positives = 78/154 (50%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 413 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKE 472
Query: 253 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIRE---GRAVNIHM 309
+ + + R KE S + A+ +E+ I G V I +
Sbjct: 473 E-----IQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRV 527
Query: 310 FCARR--PGLLLSTMRALDSLGLDIQQAVISCFN 341
C ++ PG M AL L L++ A +S N
Sbjct: 528 QCGKKDHPGARF--MEALKELDLEVNHASLSVVN 559
Score = 45 (20.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 54 SGFKSILDTDWFLNSTLNNPPQDFTNTTGL 83
S + + DT+WF L + Q F N GL
Sbjct: 139 SNDEEVTDTEWFF---LVSMTQSFVNGVGL 165
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 182 (69.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 57/185 (30%), Positives = 88/185 (47%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 414 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
Query: 253 STPTGSLMQPSTSIQPMTPTPPTLPCRVKE-EISRSPTGEAARVEVRIRE-GRAVNIHMF 310
+Q + M VK+ + + +EV ++ G I +
Sbjct: 474 E------LQKQIDV--MNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQ 525
Query: 311 CARR--PGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVL 368
C++R PG M AL L L++ A +S N + +A Q Q+K L
Sbjct: 526 CSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMIQ--QATVKMGNQFFTQDQLKVAL 581
Query: 369 LDTAG 373
+ G
Sbjct: 582 TEKVG 586
Score = 51 (23.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 146 AGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMAERRRR- 204
A F Q + GF G N++ G+G Y + K+K PA E R+R
Sbjct: 81 AVFWQSSHGFAGEDNNN----NNTVLLGWGDGYYKGEEEKSRKKKSNPASAAEQEHRKRV 136
Query: 205 -KKLN 208
++LN
Sbjct: 137 IRELN 141
Score = 47 (21.6 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 54 SGFKSILDTDWFLNSTLNNPPQDFTNTTGL 83
+G + + DT+WF L + Q F TGL
Sbjct: 154 AGDEEVTDTEWFF---LVSMTQSFVKGTGL 180
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 185 (70.2 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 51/146 (34%), Positives = 73/146 (50%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ L + E
Sbjct: 522 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKE 581
Query: 253 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCA 312
+ L S++ P P + A +E +I G I + C
Sbjct: 582 T-----LQSQMESLKKERDARPPAPSGGGGD--GGARCHAVEIEAKIL-GLEAMIRVQCH 633
Query: 313 RRPGLLLSTMRALDSLGLDIQQAVIS 338
+R M AL L LD+ A +S
Sbjct: 634 KRNHPAARLMTALRELDLDVYHASVS 659
Score = 48 (22.0 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 173 GFGSSY-SNCFDNLEGKRKGLPAKNLMAERRRR--KKLN 208
G+G Y C D+ +R PA E R+R ++LN
Sbjct: 103 GWGDGYYKGCDDDKRKQRSSTPAAAAEQEHRKRVLRELN 141
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 184 (69.8 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 60/204 (29%), Positives = 94/204 (46%)
Query: 140 DLGGEAAGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMA 199
D GG G + PA + TT G GSS S G +++A
Sbjct: 120 DSGGGGGGGVVPAP-LQAMETTATARAAVKKGGGGGSSSS-------AAAPGYVQDHIIA 171
Query: 200 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES-TPTGS 258
ERRRR+K+N R L +V+P + KMD+A+ILGDA+ Y+KEL +++ L E P
Sbjct: 172 ERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRPAAM 231
Query: 259 LMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAA--RVEVRIREGRAVNIHMFCARRPG 316
+++ S+ C ++ + GE +EVR+ E R+V + + C G
Sbjct: 232 VVRKSS-------------CSGRQSAAGDGDGEGRVPEIEVRVWE-RSVLVRVQCGNSRG 277
Query: 317 LLLSTMRALDSLGLDIQQAVISCF 340
LL+ + ++ L L I + F
Sbjct: 278 LLVRLLSEVEELRLGITHTSVMPF 301
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 166 (63.5 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 58/178 (32%), Positives = 91/178 (51%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL---HNELE 252
NL AERRRR+KL+ RL LRS VP ++ M +ASI+ DAI Y+ EL + +L +E+E
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME 92
Query: 253 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCA 312
P + + T PM P + EE+ + E ++ +I E R + +
Sbjct: 93 EAPP-EIDEEQTD--PMIK-PEVETSDLNEEMKKLGIEENVQL-CKIGE-RKFWLKIITE 146
Query: 313 RRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLLD 370
+R G+ M + LG +I ++ NG A+ + + Q +E DV +Q K LL+
Sbjct: 147 KRDGIFTKFMEVMRFLGFEIIDISLTTSNG-AILISASVQTQELCDV--EQTKDFLLE 201
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 179 (68.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 51/175 (29%), Positives = 91/175 (52%)
Query: 168 DSDFHGFGSSYSNCFDNLEGKRKGLP--AKNLMAERRRRKKLNDRLYMLRSVVPKISKMD 225
D + + G S N +G RK ++ L++ERRRR ++ D+LY LRS+VP I+KMD
Sbjct: 102 DEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMD 161
Query: 226 RASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTP-TPPTLPCRVKEEI 284
+ASI+GDA+ Y++EL + L +++ + + Q P T P R I
Sbjct: 162 KASIVGDAVLYVQELQSQAKKLKSDIAGLEAS--LNSTGGYQEHAPDAQKTQPFR---GI 216
Query: 285 SRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSL-GLDIQQAVIS 338
+ + + +++V E + + + C + G+ S ++L+SL +Q + +S
Sbjct: 217 NPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLS 271
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 194 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 250
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 251 LESTPTGSLMQP---------STSIQPMTPTPPTLPCRVKE-----EISRSPTGEAARVE 296
LES T L P T +Q + + K+ + P E ++
Sbjct: 113 LESRST-LLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPI-EVLEMK 170
Query: 297 VRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCF 340
V + V + + C+++ ++ + L+SL L+I S F
Sbjct: 171 VTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF 214
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
P ++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDAI Y+KEL +++ + +E
Sbjct: 393 PLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERV 452
Query: 253 STPTGSLMQPST 264
T SL + +T
Sbjct: 453 GTDK-SLSESNT 463
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 180 (68.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 53/151 (35%), Positives = 76/151 (50%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
P ++ AER RR+KLN R Y LR+VVP +SKMD+ S+L DA+ Y+ EL + ++ ELE
Sbjct: 341 PLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV--ELE 398
Query: 253 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREG--RAVNIHMF 310
I P++ C+ +E+ S E ++EV+I E V +
Sbjct: 399 KHAIEIQFNELKEIAGQRNAIPSV-CKYEEKAS-----EMMKIEVKIMESDDAMVRVESR 452
Query: 311 CARRPGLLLSTMRALDSLGLDIQQAVISCFN 341
PG L M AL L L++ A IS N
Sbjct: 453 KDHHPGARL--MNALMDLELEVNHASISVMN 481
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 163 (62.4 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 183 DNLEGKRKGLPAKNL---MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKE 239
DN + KR LP ++L +AERRRR+KLN++ LRS+VP ++KMD+ SILGD I Y+
Sbjct: 350 DNTKDKR--LPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNH 407
Query: 240 LLQRINDLHN 249
L +R+++L N
Sbjct: 408 LRKRVHELEN 417
Score = 59 (25.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 295 VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLD 331
VEV I E + + M C R GLLL ++ L LG++
Sbjct: 438 VEVSIIENDVL-LEMRCEYRDGLLLDILQVLHELGIE 473
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 160 (61.4 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 39/105 (37%), Positives = 68/105 (64%)
Query: 194 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 253
+KN+ ER RRK+LN++L+ LR+VVPKI+KMD+ASI+ DAI ++++L + L +E+
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISV 155
Query: 254 TPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPT---GEAARV 295
+ + + +T+++ + + T+P +K+ S P G A RV
Sbjct: 156 LQSAAAVA-ATAVEDVDDSGVTMPS-MKKLRSTPPLDGGGGALRV 198
Score = 49 (22.3 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 303 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
+ V + + CA+ G + A++SL L + A ++ +G
Sbjct: 242 KTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDG 281
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 172 (65.6 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 195 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 254
++++AER+RR+K+N R L +V+PK+ KMD+A+IL DA Y++EL +++ L + +
Sbjct: 130 EHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAAR 189
Query: 255 PTGSLMQPSTSIQPMT--PTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHM 309
T + M + + M P PP + E+ SPT V + G V + +
Sbjct: 190 VTEAAMATPSPARAMNHLPVPPEI------EVRCSPTNNVVMVRIHCENGEGVIVRI 240
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 255
+++AER+RR+KL R L +++P + KMD+AS+LGDAI ++K L + + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 256 TGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRP 315
S++ S + + S + +EVR+ G+ V I + C ++
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRV-SGKDVLIKILCEKQK 245
Query: 316 GLLLSTMRALDSLGLDIQQAVISCFNGFALDV 347
G ++ M ++ LGL I + + F G D+
Sbjct: 246 GNVIKIMGEIEKLGLSITNSNVLPF-GPTFDI 276
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 158 (60.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 187 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
G G KN++ ER RR+KLN++LY LRSVVP I+KMD+ASI+ DAI+Y++ L
Sbjct: 85 GDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQ 144
Query: 247 LHNE---LESTPTGS 258
+ E LES S
Sbjct: 145 MLREVAALESAAAAS 159
Score = 48 (22.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 296 EVRIRE-G-RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
E+R+ E G R + + + C++R + RAL+ L L + A I+ G
Sbjct: 221 ELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAG 269
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 166 (63.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 44/176 (25%), Positives = 85/176 (48%)
Query: 173 GFGSSYSNCFDNLEGKRKGLPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 231
G G+ C G R + AK +++AER+RR+KL+++ L +++P + K D+ +IL
Sbjct: 99 GRGTKRKTCS---HGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILD 155
Query: 232 DAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGE 291
DAI +K+L +++ L E E+T M + P L C I
Sbjct: 156 DAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQA-- 213
Query: 292 AARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDV 347
+E +I + + I + C + G +++ + +++ L I+ +++ F LD+
Sbjct: 214 LPEIEAKISQNDIL-IRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 51/157 (32%), Positives = 79/157 (50%)
Query: 198 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 257
++E++RR+KLN+R LRS++P ISK+D+ SIL D I+YL++L +R+ +L + ES T
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 258 SLMQPSTSIQPMTPTP-PTLPC-RVKEEISRSPTGEAARVEV---------RIRE-GRAV 305
+ + +P + C K + S GE ++ RI G V
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 306 NIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
I + CA R G+LL M + L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDG 564
>UNIPROTKB|Q5Z988 [details] [associations]
symbol:P0548E04.5 "Os06g0724800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 eggNOG:NOG245311
EMBL:AP003685 EMBL:AP007231 EMBL:AK063523 RefSeq:NP_001175006.1
UniGene:Os.11409 EnsemblPlants:LOC_Os06g50900.1 GeneID:9271931
KEGG:osa:9271931 Uniprot:Q5Z988
Length = 213
Score = 151 (58.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 32/40 (80%), Positives = 37/40 (92%)
Query: 188 KR-KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 226
KR +G+P+KNLMAERRRRK+LNDRL MLRSVVPKISK+ R
Sbjct: 147 KRVEGMPSKNLMAERRRRKRLNDRLSMLRSVVPKISKVYR 186
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 56/186 (30%), Positives = 90/186 (48%)
Query: 195 KN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 253
KN +M+ERRRR+KLN+ +L+S+VP I K+D+ASIL + I YLKEL +R+ +L + +
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKV 246
Query: 254 TPTGSLMQPSTSIQPMTPTPPTLPCRVKEE----ISRSPTGEAARVEVRIREGRAVNIHM 309
+ S +I VKE +S S G + V V + + +++ +
Sbjct: 247 SRPAKRKPCSETIIGGGGGGGGAGA-VKEHHHWVLSESQEGTPSDVRVIVMDKDELHLEV 305
Query: 310 FCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLL 369
C + ++ A+ SL LD+ S +G RA+ V+P I L
Sbjct: 306 QCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLLGLKIRAKYASSAA-VVPAMISETLR 364
Query: 370 DT-AGF 374
AG+
Sbjct: 365 TAVAGY 370
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 162 (62.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 50/161 (31%), Positives = 80/161 (49%)
Query: 190 KGLPAKN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH 248
+G KN +M+ERRRR+KL + +L+SVVP I K+D+ASIL + I YLKEL +R+ +L
Sbjct: 238 QGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEEL- 296
Query: 249 NELESTPTGSLMQPSTS-IQPMTPTPPTLPCRVKEEIS--RSPTGE----AARVEVRIRE 301
E S P+ M+ + T + R K + GE + V V I +
Sbjct: 297 -ESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMD 355
Query: 302 GRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
+ + + + C + L+ A+ + LD+ S +G
Sbjct: 356 NKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDG 396
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 158 (60.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 47/159 (29%), Positives = 82/159 (51%)
Query: 180 NCFDNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYL 237
NC + E + + + ++ ER RRK++N+ L +LRS++P + D+ASI+G AI+Y+
Sbjct: 103 NCKNKEEIENQRMT--HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYV 160
Query: 238 KELLQRINDLHNELEST--PTGSLMQPSTSIQPMTP--TPPTLPCRVKEEISRSPTGEAA 293
KEL + + + T P G S+ + P T + P + ++ S + A
Sbjct: 161 KELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES-SSSPA 219
Query: 294 RVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 332
+EV + E A NI + ++P LL + +L SL L +
Sbjct: 220 EIEVTVAESHA-NIKIMTKKKPRQLLKLITSLQSLRLTL 257
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 147 (56.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 62/230 (26%), Positives = 99/230 (43%)
Query: 41 PKEDEMHVNAVSLSGFKSILDTDWFLNSTLNNPPQDFTNTTGLLETHQELRAFNAFQETN 100
P D++H N + ++W +N QDF N T +L + +
Sbjct: 89 PPCDQLHNNLIHQMASHQQQHSNW------DNGYQDFVNLGPNSATTPDLLSLLHLPRCS 142
Query: 101 LFFQPIESHPFTLNPTXXXXXXXXXXXXXXXXX-XFVSGFDLGGEAAGFIQPASGFMGLT 159
L P HP ++ PT F F + ++ S +G+
Sbjct: 143 L---PPNHHPSSMLPTSFSDIMSSSSAAAVMYDPLFHLNFPMQPRDQNQLRNGSCLLGVE 199
Query: 160 TT-QICATNDSDFHGF-GSSYSNC-FDN--LE---G-KRKGLPAKNLMA---ERRRRKKL 207
Q+ A + F G++ +N F+N LE G RKG ++ ER RR
Sbjct: 200 DQIQMDANGGMNVLYFEGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHF 259
Query: 208 NDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 257
NDR + L++++P +K+DRASI+G+AIDY+KELL+ I + +E G
Sbjct: 260 NDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCG 309
Score = 56 (24.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 291 EAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRA 350
+ V+VRI + V I + ++ LL T + LD L LD+ +F
Sbjct: 366 KVTEVDVRIIDDE-VTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNT 424
Query: 351 EQCREGQDVLPKQIKSVLLD 370
+ C EG V I L++
Sbjct: 425 KIC-EGSCVYASGIADTLME 443
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 150 (57.9 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 200 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPT 256
E++RR+KLN+R LR ++P I+K+D+ SIL D I+YL+EL +R+ +L + EST T
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDT 502
Score = 57 (25.1 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 302 GRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGF-ALDVFRAEQCR-EGQDV 359
G V I + CA R G+LL M + L LD S +G L V C+ +G +
Sbjct: 565 GNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTV----NCKHKGSKI 620
Query: 360 L-PKQIKSVL 368
P IK L
Sbjct: 621 ATPGMIKEAL 630
Score = 37 (18.1 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 40 EPKEDEMHVNAVSLSGFKS 58
+P+ D++H +V + FK+
Sbjct: 351 DPRNDDVHYQSVISTIFKT 369
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 163 (62.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 187 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
G+ + L ++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++
Sbjct: 427 GRAEAL--NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 247 LHNELE 252
+ E E
Sbjct: 485 MEAERE 490
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 158 (60.7 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 47/170 (27%), Positives = 89/170 (52%)
Query: 175 GSSYSNCFDNLEGKRKG-LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 233
GS +C +N G+R+ L ++++AER+RR+KLN+RL L +++P + K D+A++L DA
Sbjct: 112 GSKRKDCVNN-GGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDA 170
Query: 234 IDYLKELLQRINDLHNELESTPTGS----LMQPSTSIQPMTPTPPTLPCRVKEEISRSPT 289
I +LK+L +R+ L E T L++ S + + C +S S +
Sbjct: 171 IKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSS-S 229
Query: 290 GEAA-------RVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 332
E + +E R+ + R + I + C + G ++ + +L+ L++
Sbjct: 230 DEVSIFKQTMPMIEARVSD-RDLLIRVHCEKNKGCMIKILSSLEKFRLEV 278
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 162 (62.1 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 250
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ +E
Sbjct: 450 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 156 (60.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 255
+++AER+RR+KL R L ++VP + KMD+AS+LGDA+ ++K L +R+ +L + +
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 212
Query: 256 TGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRP 315
S++ S + + ++ S E +EVR + V I + C ++
Sbjct: 213 LESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPE---IEVRFSD-EDVLIKILCEKQK 268
Query: 316 GLLLSTMRALDSLGLDIQQAVISCFNGFALDV 347
G L M ++ L + I + + F G LD+
Sbjct: 269 GHLAKIMAEIEKLHILITNSSVLNF-GPTLDI 299
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 153 (58.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 193 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
P ++ AER+RR+KLN R LR+ VP +S+MD+AS+L DA+DY+ EL +R+ L E
Sbjct: 92 PIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAEAR 151
Query: 253 STP 255
P
Sbjct: 152 RAP 154
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/189 (33%), Positives = 93/189 (49%)
Query: 195 KN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 253
KN +++ERRRR+KLN+ +L+S+VP I K+D+ASIL + I YLK L +R+ ELES
Sbjct: 391 KNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVK----ELES 446
Query: 254 TPTGSLMQPSTSIQPMTPTPPTLPCRV--KE---EISRSPTGEAAR----VEVRIREGRA 304
+ +PS Q T T C + KE EI S G+A R V V + + +
Sbjct: 447 SS-----EPSH--QRATETGQQRRCEITGKELVSEIGVSGGGDAGREHHHVNVTVTD-KV 498
Query: 305 VNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQI 364
V + + C + ++ A+ SL LD+ S +G +A+ G V P I
Sbjct: 499 VLLEVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLLGLKIQAKFACSGS-VAPGMI 557
Query: 365 KSVLLDTAG 373
L G
Sbjct: 558 SEALQKAIG 566
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 130 (50.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 32/100 (32%), Positives = 56/100 (56%)
Query: 183 DNLE-GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKE 239
DN + G++K ++ ER RRK++N+ L +LRS++P + + D+ASI+G ++Y+ E
Sbjct: 93 DNKQDGQQK---MSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISE 149
Query: 240 LLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCR 279
L Q + L + + ++ P P P+PP L R
Sbjct: 150 LQQVLQSLEAKKQRKTYAEVLSPRVVPSPR-PSPPVLSPR 188
Score = 63 (27.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 280 VKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISC 339
+ E ++ S + A VEV+ G V + + PG ++ + AL+ L L+I Q I+
Sbjct: 274 INELVANSKSA-LADVEVKF-SGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINT 331
Query: 340 FNGFALDVFRAE---QCREGQDVLPKQIK 365
+ L+ F + +C+ + L +QI+
Sbjct: 332 VDETMLNSFTIKIGIECQLSAEELAQQIQ 360
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 149 IQPASG-FMGLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLM-AERRRRKK 206
+QP +G FMG+ Q TN + +N D L K +G + + ER RR
Sbjct: 169 LQPPNGSFMGVDQDQT-ETNQGVNLMYDEENNNLDDGLNRKGRGSKKRKIFPTERERRVH 227
Query: 207 LNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
DR L++++P +K DRASI+G+AIDY+KELL+ I++
Sbjct: 228 FKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDE 267
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 152 (58.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 51/192 (26%), Positives = 86/192 (44%)
Query: 165 ATNDSDFHGFGSSYSN---CFDNLEGKRKGLPA---KNLMAERRRRKKLNDRLYMLRSVV 218
+T DF G G + F +R PA ++++AER+RR+KL + L ++V
Sbjct: 251 STTTLDFSGRGWQQDDGVGVFQQPPERRSRPPANAQEHVIAERKRREKLQQQFVALATIV 310
Query: 219 PKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQP---MTPTPPT 275
P + K D+ S+LG IDY+K+L +++ L T +P+T+ + +T
Sbjct: 311 PGLKKTDKISLLGSTIDYVKQLEEKVKALEEGSRRTA-----EPTTAFESKCRITVDDDD 365
Query: 276 LPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQA 335
S + + VE I G V + + C R GLL+ + L+ GL I
Sbjct: 366 GGSASSGTDDGSSSSSSPTVEASIH-GNTVLLKICCKERRGLLVMILSELEKQGLSIINT 424
Query: 336 VISCFNGFALDV 347
+ F L++
Sbjct: 425 SVVPFTDSCLNI 436
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 151 (58.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 194 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 252
+KNL +ER+RR+++N +Y LR+VVPKI+K+++ I DA+DY+ ELL L +EL+
Sbjct: 263 SKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 149 (57.5 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 42/152 (27%), Positives = 78/152 (51%)
Query: 195 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 254
++++AER+RR+K+N R L +V+P + KMD+A+IL DA+ Y+KE+ +++++L
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELEQHQNGG 251
Query: 255 PTGSLM--QPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAA--RVEVRIREGRA-VNIHM 309
+++ +P + P V S S T ++ +E +I G V IH
Sbjct: 252 VESAILLKKPCIATSSSDGGCPAASSAVAGS-SSSGTARSSLPEIEAKISHGNVMVRIHG 310
Query: 310 FCARRPGLLLSTMRALDSLGLDIQQAVISCFN 341
+ G L+ + A++ L L I + F+
Sbjct: 311 ENNGK-GSLVRLLAAVEGLHLGITHTNVMPFS 341
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 112 (44.5 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 22/54 (40%), Positives = 41/54 (75%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL 247
++ ER RR+++N+ L +LRS++P+ + + D+ASI+G AI+++KEL Q++ L
Sbjct: 92 HIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSL 145
Score = 80 (33.2 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 248 HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNI 307
H+ +ST T + S S + +P T+ ++ E RS G A +EV + E A ++
Sbjct: 218 HSPRDSTTTTTAASASASASASSSSPATVAAALQSE-HRS--G-LADIEVSLVETHA-SV 272
Query: 308 HMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFAL 345
+ RRPG LL + L +L L + ++ + L
Sbjct: 273 RVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVL 310
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 187 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
G+ + L ++ AER+RR+KLN R Y LR+VVP ISKMD+AS+L DAI Y+ ++ ++I
Sbjct: 314 GREEAL--NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 247 LHNE 250
E
Sbjct: 372 YETE 375
>UNIPROTKB|Q8LII5 [details] [associations]
symbol:OJ1167_G06.116 "Putative uncharacterized protein
OJ1167_G06.116" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 EMBL:AP003817 EMBL:AK242001
EnsemblPlants:LOC_Os07g47960.1 OMA:HAESETS Uniprot:Q8LII5
Length = 157
Score = 93 (37.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 200 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSL 259
ER++ L+++L +LRS+ + + SI+ DA +Y+KEL Q++ L+ E+ +L
Sbjct: 5 ERKKAAALHEKLQILRSITHSHA-LSNTSIITDASEYIKELKQKVVRLNKEIACAEAAAL 63
Query: 260 MQPS 263
Q S
Sbjct: 64 RQNS 67
Score = 83 (34.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 302 GRAVNIHMFCARR-PGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAE 351
G I++F + PGLL+S + A D LGL++ +A SC + F L+ E
Sbjct: 77 GHGFLINVFSDKSCPGLLVSILEAFDELGLNVLEATASCDDTFRLEAVGGE 127
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 118 (46.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 253
++ ER RR+++N+ L +LRS++P+ + + D+ASI+G AID++KEL Q L LE+
Sbjct: 97 HIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQ----LLQSLEA 152
Query: 254 TPTGSLMQP 262
LMQP
Sbjct: 153 QKRTLLMQP 161
Score = 67 (28.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 293 ARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFAL 345
A +EV + E A +I + ARRPG LL + L +L L + ++ AL
Sbjct: 235 ADIEVSLVETHA-SIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLAL 286
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 183 DNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKEL 240
D +E +R ++ ER RR+++N+ L LRS++P + + D+ASI+G AID++KEL
Sbjct: 108 DEVENQRM----THIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKEL 163
Query: 241 LQRINDLHNE-----LESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEIS-RSPTGEAAR 294
Q + L E + TP + S+S+ + ++ + + R G+
Sbjct: 164 EQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTE 223
Query: 295 VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQ-- 352
VE + + V++ + C R +L + +++ L L I IS F + F +
Sbjct: 224 VEATVIQNH-VSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282
Query: 353 -CREG 356
C+ G
Sbjct: 283 GCKLG 287
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPKI--SKMDRASILGDAIDYLKELLQRINDLHNEL-- 251
++ ER RRK++N+ L +LRS++P + D+ASI+G AI+YLKEL + + +
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 252 --ESTPTGSLMQPSTSIQPMTPTPP--TLPCRVKEEISRSPTGEAARVEVRIREGRAVNI 307
E T G +TS P P S + A +EV + E A ++
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHA-SL 245
Query: 308 HMFCARRPGLLLSTMRALDSLGLDI 332
+ +RP LL + ++ SL L +
Sbjct: 246 KILAKKRPRQLLKLVSSIQSLRLTL 270
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 119 (46.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 188 KRKGLPA--KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 245
++ G PA + AER+RR+++N L LR++VP S+MD+A++LG+ + +++EL R +
Sbjct: 13 RKGGSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRAD 72
Query: 246 D 246
D
Sbjct: 73 D 73
Score = 49 (22.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 303 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
R V + CA RPGL+ RA+ S+ +A ++ G
Sbjct: 117 RRVRAWVCCADRPGLMSDLGRAVRSVSARPVRAEVATVGG 156
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 135 (52.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 153 SGFM-GL---TTTQICATNDSDFHGFGSSYSNCFD-NLEGKRKGL-PAKN--LMAERRRR 204
SG++ G+ TTTQ +N D + S + + E +RKG KN ER RR
Sbjct: 164 SGYLLGIDTNTTTQRDESNVGDENNNAQFDSGIIEFSKEIRRKGRGKRKNKPFTTERERR 223
Query: 205 KKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 257
LN+R L+ ++P SK DRASIL D IDY+ EL +R+++L +E G
Sbjct: 224 CHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRCG 276
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 291 EAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 332
+ V+VRI + V I + ++ LL + LD L LD+
Sbjct: 336 KVTEVDVRIVDDE-VTIKVVQKKKINCLLLVSKVLDQLQLDL 376
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 137 (53.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 25/54 (46%), Positives = 42/54 (77%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN 249
++M+ERRRR+KLN+ +L+S++P + K+D+ASIL + I YLK L +R+ +L +
Sbjct: 379 HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELES 432
Score = 41 (19.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 165 ATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMA 199
A ND D G S+++CF + KR PA+ ++A
Sbjct: 304 AANDVD--GVAYSHASCF--VSWKRAN-PAEKVVA 333
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/111 (30%), Positives = 63/111 (56%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELE- 252
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+KEL Q ++ L + +
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
Query: 253 STPTGSLMQP----STSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRI 299
T ++ P + + +P PP L R+ ++ +S + R+ V I
Sbjct: 199 KVYTDQVLSPRPPATVAASCCSPRPPQLSPRLPPQLLKSTPPLSPRLAVPI 249
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 132 (51.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 191 GLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 250
G ++ AER+RR+KLN R LR+ VP +S+MD+AS+L DA Y+ EL R+ L ++
Sbjct: 107 GPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESD 166
Query: 251 LESTPTGSLMQPST 264
+ +PS+
Sbjct: 167 ARQA-AAARFEPSS 179
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 108 (43.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 178 YSNCFDNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKIS-KMDRASILGDAIDY 236
+SN K + +K+ + E+RRR K+N+R +LR ++P K D AS L + IDY
Sbjct: 32 HSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDY 91
Query: 237 LKELLQRINDLHNELESTPTGSLMQPSTSIQP 268
++ L +++ + E + G +P T + P
Sbjct: 92 VQYLQEKVQ----KYEGSYPGWSQEP-TKLTP 118
Score = 65 (27.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 261 QPSTSIQPMTPTPPTLPCRVKEEISRSP-TGEA-ARVEVRIREGRAVNIHMFCARRPGLL 318
QP + + P P LP E+ + P T + + + EG ++I + LL
Sbjct: 185 QPELDDKGLPPLQPILPMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHE--LL 242
Query: 319 LSTMRALDSLGLDIQQAVIS 338
S +AL + G+D+ QA +S
Sbjct: 243 SSLTQALQNAGIDLSQAKLS 262
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 131 (51.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 187 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL-LQ-RI 244
GKR + ++E+RRR ++N+++ L+S++P SK D+AS+L DAI+YLK+L LQ ++
Sbjct: 28 GKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQM 87
Query: 245 NDLHNELESTP 255
+ N L P
Sbjct: 88 LSMRNGLYLPP 98
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 129 (50.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 174 FGSSY--SNCFDNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 231
FG ++ +C +E K + L + +AE+RRR ++N L LR +VP K+D+A++L
Sbjct: 44 FGGNFPADDCVGGIE-KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLA 102
Query: 232 DAIDYLKELLQRIND--LHNELESTPTGSLMQPST 264
I+ +KEL Q+ + + +L + +QP T
Sbjct: 103 TVIEQVKELKQKAAESPIFQDLPTEADEVTVQPET 137
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 133 (51.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 144 EAAGFIQPASGFMGLTT--TQICATNDSDFHGFGSSYSN--CFDNLEGKRKGLPAKNLMA 199
EAAG P+SG T QI +S ++ + KR + +A
Sbjct: 206 EAAG--TPSSGVCKAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLA 263
Query: 200 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSL 259
ERRRR+K+N+++ L+ ++P+ +K + S L DAI+Y+K L +I + + + +
Sbjct: 264 ERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNTQQ 323
Query: 260 MQPSTSIQPMTPTPPTLP 277
P ++ P PP +P
Sbjct: 324 FMPHMAMDMNRP-PPFIP 340
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 126 (49.4 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELE- 252
++ ER RR+++ND L +LRS+ P I + D+ASI+G AID++KEL + L + +
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQKKR 62
Query: 253 -STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEA 292
P L+ P++ +P P S SPT A
Sbjct: 63 RQQPQAHLISPASISASGGGSPSPTPSPRSLITSCSPTAAA 103
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 124 (48.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/89 (32%), Positives = 49/89 (55%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELES 253
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+KEL Q + L +
Sbjct: 134 HITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKKNR 193
Query: 254 TPTGSLM-----QPSTSIQPMTPTPPTLP 277
+ P+ + + PTPP P
Sbjct: 194 KAYADQVLSPRPSPAAAALMVKPTPPISP 222
Score = 48 (22.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 313 RRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAE---QCREGQDVLPKQIKSVLL 369
R PG L + AL+SL L+I I + + F + +C + L ++I+ L
Sbjct: 356 RAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECELSAEELVQEIQQTFL 415
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN---------DLHN 249
AERRRR+++N L LRS++P +K D+AS+L + I+++KEL ++ D H
Sbjct: 113 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAAAGDYHG 172
Query: 250 ELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGR-AVNIH 308
E + + S + Q + PT +E++ +A EG+ V
Sbjct: 173 NDEDDDDAVVGRRSAAAQQLLPTEA-------DELAVDAAVDA--------EGKLVVRAS 217
Query: 309 MFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
+ C RP L+ RAL +L L ++A I+ G
Sbjct: 218 LCCEDRPDLIPDIARALAALRLRARRAEITTLGG 251
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 131 (51.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 253
++ ER RR+++N L LRS++P I + D+ASI+G AID++K L Q++ L + S
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 254 TPTGSLMQ--PS-TSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMF 310
+ + P S++ ++ L KEE S ++E + E VN+ +
Sbjct: 255 QQSDDNKEQIPEDNSLRNISSNK--LRASNKEEQSSK-----LKIEATVIESH-VNLKIQ 306
Query: 311 CARRPGLLLSTMRALDSLGLDIQQA-VISCFN---GFALDVFRAEQCREGQ-DVLPKQIK 365
C R+ G LL ++ L+ L + + S N ++ ++ ++C G D + I+
Sbjct: 307 CTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAAIR 366
Query: 366 SV 367
+
Sbjct: 367 QI 368
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 170 DFHG-FGSSYSNCFDN--LEGKRKG-----LPAKNLMAERRRRKKLNDRLYML 214
+FH S ++ + N LEG + LP L R RRK+ N+ L L
Sbjct: 116 EFHSPIHSETNHYYHNPSLEGVNEAISNQELPFNPLENARSRRKRKNNNLASL 168
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNEL-E 252
++ ER RR+ +ND L LRS++P I + D+A+++G AIDY+K+L Q++ L E
Sbjct: 119 HIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAE 178
Query: 253 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCA 312
+ G + +T+ P S + G VE G V + +
Sbjct: 179 RSGVGVVAAAATAASDGVFVSPQYT-----SYSEARGGSGVDVEATAAVGGHVRVRVAGR 233
Query: 313 RRPGLLLSTMRALDSLGLDI---------QQAVISCFN 341
R G L+ + A++ L L + AV+ CFN
Sbjct: 234 RWTGRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCFN 271
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/197 (28%), Positives = 89/197 (45%)
Query: 187 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
GK KG N ER RR++LN + LR + P +K DRASI+GDAI+Y+ EL + + +
Sbjct: 259 GKGKG--KANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKE 316
Query: 247 LHNELESTPTGS-------LMQP------STSIQPMTPTPPT-LPCRVKEEISRSPTGEA 292
L +E G+ L Q S+S++P+ L ++ + + E
Sbjct: 317 LKILVEQKRHGNNRRKVLKLDQEAAADGESSSMRPVRDDQDNQLHGAIRSSWVQRRSKEC 376
Query: 293 ARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQ 352
V+VRI + VNI + ++ LL + LD L++ V + +F +
Sbjct: 377 -HVDVRIVDDE-VNIKLTEKKKANSLLHAAKVLDEFQLELIHVVGGIIGDHHIFMFNTK- 433
Query: 353 CREGQDVLPKQIKSVLL 369
EG V + LL
Sbjct: 434 VSEGSAVYACAVAKKLL 450
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/80 (36%), Positives = 49/80 (61%)
Query: 198 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 257
+A R RR+++++R+ +L+ +VP +KMD AS+L +AI Y+K L ++I L+N TP
Sbjct: 132 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPP 191
Query: 258 SLMQPSTSIQPMTPTPPTLP 277
Q S ++ +PP P
Sbjct: 192 PQDQASQAVTTSWVSPPPPP 211
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/97 (35%), Positives = 58/97 (59%)
Query: 176 SSYSNCFDNLEGKR-KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI 234
SS S KR + NL +E+RRR ++N+++ L+S++P +K D+AS+L +AI
Sbjct: 182 SSKSGPSSRSSSKRCRAAEVHNL-SEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAI 240
Query: 235 DYLKEL-LQ-RINDLHNELESTPTGSLMQPSTSIQPM 269
+YLK+L LQ ++ + N + P L P T++ P+
Sbjct: 241 EYLKQLQLQVQMLTMRNGINLHP---LCLPGTTLHPL 274
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/132 (31%), Positives = 69/132 (52%)
Query: 140 DLGGEAAGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMA 199
D GGE GF +G G + + A G GS S + NL +
Sbjct: 66 DCGGELGGFCDSEAG--GSSEPE-AAAGARPRGGSGSKRSRAAE----------VHNL-S 111
Query: 200 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL-LQ-RINDLHNELESTPT- 256
E+RRR K+N+++ L+S++P +K D+AS+L +AI+YLK+L LQ ++ + N + P+
Sbjct: 112 EKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSY 171
Query: 257 -GSLMQPSTSIQ 267
++P+ + Q
Sbjct: 172 LSGALEPAQASQ 183
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 105 (42.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 186 EGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 245
EGK ++ + ER RR NDR + L++++P +K ASI+ D I Y+ EL + ++
Sbjct: 15 EGKGSK-KSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVS 73
Query: 246 DLHNELESTPTGS 258
+L +E G+
Sbjct: 74 ELKYLVEKKKCGA 86
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 46/145 (31%), Positives = 67/145 (46%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVP-KISKM-DRASILGDAIDYLKELLQRINDLHNELES 253
++ ER RRK++N L +L+S++P S+ D+ASI+ I YLK+L QR+ L +L++
Sbjct: 104 HIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQLKA 163
Query: 254 TPTGS--------LMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAV 305
T M P S T T T A VEV + E R
Sbjct: 164 TKLNQSPNIFSDFFMFPQYSTATATATA-TASSSSSSHHHHKRLEVVADVEVTMVE-RHA 221
Query: 306 NIHMFCARRPGLLLSTMRALDSLGL 330
NI + +P LL + +SLGL
Sbjct: 222 NIKVLTKTQPRLLFKIINEFNSLGL 246
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 188 KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 247
KR + +AERRRR+K+N+R+ L+ ++P+ +K + S+L D I+Y+K L +IN
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF 206
Query: 248 --HNELE-STPTGSLMQPSTS----IQPMTPTPPTLP 277
H + + P + PS + + P P PP P
Sbjct: 207 MPHMAMGMNQPPAYIPFPSQAHMAGVGPSYP-PPRYP 242
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 124 (48.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGS 258
AERRRR+++N+ L LRS++P +K D+AS+L + I ++KEL +R + +E PT S
Sbjct: 181 AERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKEL-KRETSVISETNLVPTES 239
Score = 38 (18.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 347 VFRAEQCREGQ-DVLPKQIKSV 367
V +A C E + D+LP IK++
Sbjct: 258 VIKASLCCEDRSDLLPDMIKTL 279
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 23/43 (53%), Positives = 34/43 (79%)
Query: 198 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 240
++ERRRR ++N+R+ L+ ++P SK D+ASIL +AIDYLK L
Sbjct: 264 LSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSL 306
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 117 (46.2 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 28/89 (31%), Positives = 52/89 (58%)
Query: 198 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 257
++E++RR K+N+++ L+ ++P +K D+AS+L +AI+YLK+L ++ L + G
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL-----AVMNG 154
Query: 258 SLMQPSTSIQPMTPTPPTLPCRVKEEISR 286
+ P P P PPT R+ E + +
Sbjct: 155 LGLNPMRL--PQVP-PPT-HTRINETLEQ 179
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 183 DNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 242
D+ KR + ++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D I+Y+K L
Sbjct: 269 DSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQS 328
Query: 243 RI 244
+I
Sbjct: 329 QI 330
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 121 (47.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL-----H 248
++ ER RR+++N L +LRS++P+ K D+ASI+G AID++KEL ++ L H
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 249 N-ELESTPTGSLMQPSTSIQPMTPTPPTL 276
N +L + T S Q S Q P +L
Sbjct: 150 NAKLNQSVTSSTSQDSNGEQENPHQPSSL 178
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 165 ATNDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMAE------RRRRKKLNDRLYMLRSVV 218
+ + SD G S+ N +R G ++ AE RRRR ++N+R+ L+ ++
Sbjct: 225 SVSQSDI-GLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELI 283
Query: 219 PKISKMDRASILGDAIDYLKELLQRI 244
P S+ D+ASIL +AIDYLK L ++
Sbjct: 284 PHCSRTDKASILDEAIDYLKSLQMQL 309
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 255
++M+ER+RR+KLND + LRS++P SK D+ ++L +A YLK L I ELE T
Sbjct: 267 HMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEIT----ELEGTN 322
Query: 256 T 256
T
Sbjct: 323 T 323
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 188 KRKGLPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
KR+ A+ + ++ERRRR ++N++L L+ +VP +K D+ASIL +AI+YLK L ++
Sbjct: 224 KRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQI 283
Query: 247 LHNELESTPTGSLMQPSTSIQPMTP 271
+ P +M P T Q M P
Sbjct: 284 MWMTTGIVP---MMFPGTH-QLMPP 304
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 109 (43.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 240
AER+RR+++N L LR +VP S+MD+A++LG+ + Y+++L
Sbjct: 35 AERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKL 76
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 303 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
R V + CA RPGL+ A S+ +A I+ G
Sbjct: 117 RRVKASVCCADRPGLMSELGDAERSVSARAVRAEIATVGG 156
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 48/194 (24%), Positives = 86/194 (44%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELE- 252
++ ER RR+++N+ L LRS+ P I + D+ASI+G I+++KEL Q + L ++
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 253 ---STPT----GSLMQPS-----TSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIR 300
+ P+ ++PS T+ P + + +E+ A VE +I
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKI- 121
Query: 301 EGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAE---QCREGQ 357
G V + + R G L+ + L+ L + IS L F + +C
Sbjct: 122 SGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLSL 181
Query: 358 DVLPKQI-KSVLLD 370
+ L ++ KS + D
Sbjct: 182 EELTLEVQKSFVSD 195
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 32/100 (32%), Positives = 57/100 (57%)
Query: 158 LTTTQICAT-NDSDFHGFGSSYSNCFDNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRS 216
LT + AT N ++ ++ + E G +++++ER+RR+KLND L++
Sbjct: 216 LTKMHVAATYNRQYYYQQAAAAAASASAAEAPPSGNQLQHMISERKRREKLNDSFLALKA 275
Query: 217 VVPKISKMDRASILGDAIDYLKELLQRINDL---HNELES 253
V+P SK D+ SIL A +Y+K L ++++L + ELE+
Sbjct: 276 VLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRELEA 315
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 185 LEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 244
L KR + ++ERRRR ++N+++ L+ ++P +K+D+AS+L +AI+YLK L
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL---- 392
Query: 245 NDLHNELESTPTGSLMQPSTSIQP 268
L ++ S +G + P+ P
Sbjct: 393 -QLQVQIMSMASGYYLPPAVMFPP 415
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 188 KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 247
KR A + +ER+RR K+N R+ L+ +VP SK D+AS+L + I+YLK+L +++ +
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
Query: 248 HN-ELESTPTGSLMQPSTSIQ 267
+ S MQ +Q
Sbjct: 270 SRMNMPSMMLPMAMQQQQQLQ 290
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 107 (42.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 180 NCFDNLEGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKE 239
NC E K + AERRRR+++N L LR++VP KMD+A++L + + ++K+
Sbjct: 66 NCGGGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKK 125
Query: 240 L 240
L
Sbjct: 126 L 126
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 311 CARRPGLLLSTMRALDSLGLDIQQAVISCFNG 342
C R L + RAL LGL++ + ++ G
Sbjct: 170 CDDRADLFVDVKRALQPLGLEVVGSEVTTLGG 201
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPT 256
AERRRR+++N L LRS++P +K D+AS+L + I ++KEL ++ + + + + PT
Sbjct: 139 AERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQ-VPT 195
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 240
+ERRRR ++N++L L+ ++P +K D+ S+L +AIDYLK L
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSL 62
>UNIPROTKB|Q10LR1 [details] [associations]
symbol:Os03g0338400 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 SMART:SM00353 GO:GO:0005634
EMBL:DP000009 EMBL:AP008209 Gene3D:4.10.280.10 EMBL:CM000140
EMBL:GU120349 EMBL:AK073378 RefSeq:NP_001050055.1 UniGene:Os.53575
EnsemblPlants:LOC_Os03g21970.1 GeneID:4332778 KEGG:osa:4332778
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 Uniprot:Q10LR1
Length = 163
Score = 107 (42.7 bits), Expect = 0.00034, P = 0.00034
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 237 LKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTG-EAARV 295
L+E LQ + + + + T LM S I+ + R+ +EI+ + RV
Sbjct: 13 LQEKLQILRSITHSHALSNTSILMDASKYIKELKQKV----VRLNQEIACAQDALRQNRV 68
Query: 296 EVR-IREGRAVNIHMFCARR-PGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQC 353
V +R G VN+ F + PGLL+S + A D LGL + +A SC + F L+ +E
Sbjct: 69 TVETLRHGFLVNV--FSGKSCPGLLVSILEAFDELGLSVLEATASCTDTFRLEAIGSENL 126
Query: 354 REGQD 358
E D
Sbjct: 127 MEKVD 131
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 44/146 (30%), Positives = 69/146 (47%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGS 258
AERRRR+++N L LR ++P +MD+A++L +D +K+L ++ +++ + TP
Sbjct: 72 AERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEI---TQRTP--- 125
Query: 259 LMQPST---SIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNI-HMFCARR 314
+ P T SI+ T T V + A + R I H F
Sbjct: 126 -LPPETNEVSIECFTGDAATAATTVAG--NHKTLYIKASISCDDRPDLIAGITHAF---- 178
Query: 315 PGLLLSTMRA-LDSLGLDIQQAVISC 339
GL L T+RA + SLG +Q I C
Sbjct: 179 HGLRLRTVRAEMTSLGGRVQHVFILC 204
>TAIR|locus:2828302 [details] [associations]
symbol:AT2G40435 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002336 EMBL:AC007020
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 EMBL:AY227635
EMBL:AY649272 EMBL:AK220685 IPI:IPI00531488 RefSeq:NP_565932.1
UniGene:At.37051 ProteinModelPortal:Q8RUZ5 SMR:Q8RUZ5 PRIDE:Q8RUZ5
EnsemblPlants:AT2G40435.1 GeneID:818637 KEGG:ath:AT2G40435
TAIR:At2g40435 HOGENOM:HOG000241360 InParanoid:Q8RUZ5
PhylomeDB:Q8RUZ5 ArrayExpress:Q8RUZ5 Genevestigator:Q8RUZ5
Uniprot:Q8RUZ5
Length = 158
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 33/137 (24%), Positives = 63/137 (45%)
Query: 237 LKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTL-PCRVKEEISRSPTG-EAAR 294
L+E Q + + N T +M S IQ + E+ S PT +
Sbjct: 11 LQEKFQLLRSITNSHAENDTSIIMDASKYIQKLKQKVERFNQDPTAEQSSSEPTDPKTPM 70
Query: 295 VEVRIREGRAVNIHMFCAR-RPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQC 353
V V + + I++F + +PG+L+S + A + +GL++ +A SC + F+L E
Sbjct: 71 VTVETLD-KGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFSLHAMGLEN- 128
Query: 354 REGQDVLPKQIKSVLLD 370
+G+++ + +K + D
Sbjct: 129 EDGENMDAEAVKQAVTD 145
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 111 (44.1 bits), Expect = 0.00053, P = 0.00053
Identities = 33/113 (29%), Positives = 63/113 (55%)
Query: 141 LGGEAAGFIQPASGFM-GLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPA--KNL 197
L E+ +P + + G + + +++D G S+ S +G+ + ++L
Sbjct: 86 LSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSL 145
Query: 198 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 250
A R+RR+++NDRL L+S+VP +K+D +++L DA+ Y+K L +I L +E
Sbjct: 146 YA-RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 97 (39.2 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 246
AERRRR+++N L LR ++P +MD+A++L ++ +K L R +
Sbjct: 73 AERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTRATE 120
Score = 50 (22.7 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 16/48 (33%), Positives = 19/48 (39%)
Query: 311 CARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQD 358
C RPGLL L L A +SC G F CRE ++
Sbjct: 161 CDDRPGLLADIAATFRRLRLRPLSADMSCLGGRTRHAFVL--CREEEE 206
Score = 37 (18.1 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 9 VWMEGEEEQPL 19
+W EG+++Q L
Sbjct: 8 IWQEGKQQQHL 18
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 188 KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 247
KR + ++ERRRR ++N+++ L+ ++P +K+D+AS+L +AI+YLK L L
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL-----QL 363
Query: 248 HNELESTPTGSLMQPS---TSIQPMTPTPP 274
++ S TG + P T++Q + PP
Sbjct: 364 QVQMMSMGTGLCIPPMLLPTAMQHLQ-IPP 392
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 114 (45.2 bits), Expect = 0.00072, Sum P(2) = 0.00071
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 196 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 253
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI++++EL Q + L ++
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 254 TPTGSLMQPSTSIQPMTPTPPT 275
G + T+ + +P T
Sbjct: 259 RILGETGRDMTTTTTSSSSPIT 280
Score = 41 (19.5 bits), Expect = 0.00072, Sum P(2) = 0.00071
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 60 LDTDWFLN-STLNNPPQDFTNTTGLLETHQ 88
+D +FL LN+ +D T L+ +HQ
Sbjct: 93 IDPVYFLKFPVLNDKIEDHNQTQHLMPSHQ 122
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 29/109 (26%), Positives = 58/109 (53%)
Query: 189 RKGLPA-KNLMAERRRRKKLNDRLYMLRSVVPKISKM-DRASILGDAIDYLKELLQRIND 246
R+G ++ +AER RR+K+++++ L+ ++P +K+ +A +L + I+Y++ L +++
Sbjct: 156 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 247 LHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARV 295
L +LE +G+ P+ + P TLP V I RV
Sbjct: 216 LSMKLEVVNSGASTGPTIGVFPSGDLG-TLPIDVHRTIYEQQEANETRV 263
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 199 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 240
AERRRR+++N L LRS++P +K D+AS+L + I+++KEL
Sbjct: 128 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKEL 169
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 25/62 (40%), Positives = 45/62 (72%)
Query: 195 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL---HNEL 251
+++++ER+RR+KLND L++V+P SK D+ASIL A +++K L ++++L + EL
Sbjct: 184 QHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEKNREL 243
Query: 252 ES 253
E+
Sbjct: 244 EA 245
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 110 (43.8 bits), Expect = 0.00098, P = 0.00097
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 135 FVSGFDLGGEAAGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSNCFDNLEGKRKGLPA 194
F++G ++GG G+ SG T +C ++ S + + S + + R
Sbjct: 13 FLAGNEVGG--GGYC--VSGDYMTTMQSLCGSSSSTSSYYPLAISGIGETMAQDRALAAL 68
Query: 195 KNLM-AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 243
+N AERRRR+++N L LR+V+ SK D+A++L + ++EL Q+
Sbjct: 69 RNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 344 0.00097 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 98
No. of states in DFA: 612 (65 KB)
Total size of DFA: 229 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.47u 0.08s 30.55t Elapsed: 00:00:02
Total cpu time: 30.48u 0.08s 30.56t Elapsed: 00:00:02
Start: Fri May 10 10:16:09 2013 End: Fri May 10 10:16:11 2013