Query 017064
Match_columns 378
No_of_seqs 152 out of 1550
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 05:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017064.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017064hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 4.5E-58 9.8E-63 412.2 29.8 307 45-378 1-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 4.3E-54 9.4E-59 396.2 34.7 320 48-378 1-326 (326)
3 KOG0023 Alcohol dehydrogenase, 100.0 4.3E-52 9.4E-57 361.0 27.5 315 42-378 4-354 (360)
4 KOG0024 Sorbitol dehydrogenase 100.0 2.6E-51 5.6E-56 357.1 27.5 311 45-377 2-351 (354)
5 KOG1197 Predicted quinone oxid 100.0 6.9E-51 1.5E-55 341.3 27.9 324 44-378 5-330 (336)
6 COG1062 AdhC Zn-dependent alco 100.0 3.2E-49 6.9E-54 347.1 26.6 311 47-378 2-366 (366)
7 KOG0025 Zn2+-binding dehydroge 100.0 2.8E-48 6.1E-53 331.4 31.0 336 41-377 13-351 (354)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 8.3E-47 1.8E-51 357.6 32.9 312 48-376 1-371 (371)
9 cd08239 THR_DH_like L-threonin 100.0 2.9E-46 6.4E-51 350.0 34.3 306 48-378 1-339 (339)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.1E-46 1.1E-50 350.7 33.3 311 47-377 1-357 (358)
11 PLN02740 Alcohol dehydrogenase 100.0 6.4E-46 1.4E-50 352.5 33.2 315 44-378 7-381 (381)
12 PLN02586 probable cinnamyl alc 100.0 7.4E-46 1.6E-50 349.1 32.8 310 44-378 9-353 (360)
13 cd08291 ETR_like_1 2-enoyl thi 100.0 2E-45 4.3E-50 342.3 34.0 317 48-377 1-324 (324)
14 PLN02178 cinnamyl-alcohol dehy 100.0 4.3E-45 9.3E-50 345.0 33.9 307 49-378 6-348 (375)
15 PLN02827 Alcohol dehydrogenase 100.0 5.8E-45 1.3E-49 345.1 33.8 310 46-378 11-376 (378)
16 cd08292 ETR_like_2 2-enoyl thi 100.0 2.5E-44 5.4E-49 334.8 36.2 322 48-377 1-324 (324)
17 PRK09880 L-idonate 5-dehydroge 100.0 6.7E-45 1.4E-49 341.1 32.5 303 46-378 3-343 (343)
18 TIGR02818 adh_III_F_hyde S-(hy 100.0 2E-44 4.4E-49 340.7 34.1 310 48-378 2-368 (368)
19 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.4E-44 5.2E-49 334.9 32.6 298 51-376 2-328 (329)
20 cd08301 alcohol_DH_plants Plan 100.0 4.5E-44 9.8E-49 338.9 33.5 309 47-376 2-368 (369)
21 cd08300 alcohol_DH_class_III c 100.0 5.5E-44 1.2E-48 337.9 33.3 310 47-377 2-368 (368)
22 PLN02514 cinnamyl-alcohol dehy 100.0 8.8E-44 1.9E-48 335.0 34.1 307 46-378 8-350 (357)
23 KOG0022 Alcohol dehydrogenase, 100.0 2.2E-44 4.8E-49 311.4 26.1 314 45-378 5-375 (375)
24 cd08277 liver_alcohol_DH_like 100.0 2.9E-43 6.2E-48 332.7 34.0 309 47-377 2-365 (365)
25 PLN03154 putative allyl alcoho 100.0 9E-43 2E-47 326.7 35.3 313 48-378 9-345 (348)
26 cd08290 ETR 2-enoyl thioester 100.0 2E-42 4.4E-47 324.4 35.7 328 48-378 1-341 (341)
27 PRK10309 galactitol-1-phosphat 100.0 8.3E-43 1.8E-47 327.6 33.2 310 48-378 1-346 (347)
28 TIGR02819 fdhA_non_GSH formald 100.0 6.1E-43 1.3E-47 331.9 32.2 308 47-378 2-390 (393)
29 TIGR03201 dearomat_had 6-hydro 100.0 1.1E-42 2.5E-47 326.7 32.9 305 51-378 2-349 (349)
30 cd08295 double_bond_reductase_ 100.0 3.9E-42 8.5E-47 321.9 33.1 313 48-378 8-338 (338)
31 TIGR01202 bchC 2-desacetyl-2-h 100.0 2E-42 4.3E-47 319.3 30.0 293 47-377 1-308 (308)
32 cd08230 glucose_DH Glucose deh 100.0 4.7E-42 1E-46 323.4 31.1 305 48-378 1-355 (355)
33 cd08233 butanediol_DH_like (2R 100.0 1.1E-41 2.4E-46 320.6 33.1 306 48-377 1-351 (351)
34 cd08238 sorbose_phosphate_red 100.0 8.5E-42 1.8E-46 327.0 31.5 311 47-378 2-368 (410)
35 cd08294 leukotriene_B4_DH_like 100.0 2.8E-41 6.2E-46 315.0 34.1 309 47-378 2-329 (329)
36 TIGR02825 B4_12hDH leukotriene 100.0 2.2E-41 4.7E-46 315.2 32.6 294 62-377 18-325 (325)
37 cd08293 PTGR2 Prostaglandin re 100.0 3.4E-41 7.3E-46 316.6 33.1 303 61-378 21-345 (345)
38 COG1063 Tdh Threonine dehydrog 100.0 1.9E-41 4.1E-46 316.3 30.5 311 48-378 1-350 (350)
39 cd08246 crotonyl_coA_red croto 100.0 5.1E-41 1.1E-45 320.6 33.4 318 44-377 9-392 (393)
40 cd08237 ribitol-5-phosphate_DH 100.0 2.8E-41 6E-46 316.0 30.7 293 49-378 4-339 (341)
41 cd05284 arabinose_DH_like D-ar 100.0 9E-41 1.9E-45 313.1 34.0 309 48-378 1-340 (340)
42 cd08296 CAD_like Cinnamyl alco 100.0 9.9E-41 2.1E-45 311.8 33.6 304 48-377 1-333 (333)
43 cd08231 MDR_TM0436_like Hypoth 100.0 8.6E-41 1.9E-45 315.7 33.3 308 49-378 2-361 (361)
44 PTZ00354 alcohol dehydrogenase 100.0 2.8E-40 6.1E-45 308.7 34.8 324 47-378 1-328 (334)
45 cd08244 MDR_enoyl_red Possible 100.0 5.9E-40 1.3E-44 305.3 36.0 319 48-378 1-324 (324)
46 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 5.1E-40 1.1E-44 305.9 34.5 317 48-378 1-325 (325)
47 cd08274 MDR9 Medium chain dehy 100.0 2.8E-40 6.1E-45 310.9 32.9 311 48-378 1-350 (350)
48 PRK10754 quinone oxidoreductas 100.0 5.1E-40 1.1E-44 306.3 33.7 322 47-378 1-327 (327)
49 cd05282 ETR_like 2-enoyl thioe 100.0 8.2E-40 1.8E-44 304.2 34.7 308 63-377 14-323 (323)
50 TIGR02817 adh_fam_1 zinc-bindi 100.0 5.5E-40 1.2E-44 307.2 32.6 316 49-377 1-334 (336)
51 TIGR01751 crot-CoA-red crotony 100.0 6.7E-40 1.5E-44 313.1 33.0 319 44-378 4-387 (398)
52 cd08297 CAD3 Cinnamyl alcohol 100.0 3.1E-39 6.8E-44 302.8 34.3 312 48-378 1-341 (341)
53 cd08278 benzyl_alcohol_DH Benz 100.0 2.1E-39 4.5E-44 306.4 33.2 311 47-377 2-365 (365)
54 TIGR02823 oxido_YhdH putative 100.0 3.4E-39 7.3E-44 300.3 34.1 315 49-378 1-323 (323)
55 cd08289 MDR_yhfp_like Yhfp put 100.0 3.8E-39 8.1E-44 300.3 32.9 317 48-378 1-326 (326)
56 cd08283 FDH_like_1 Glutathione 100.0 4.8E-39 1E-43 305.9 33.8 308 48-378 1-386 (386)
57 KOG1198 Zinc-binding oxidoredu 100.0 7.3E-40 1.6E-44 301.7 26.9 322 48-378 5-345 (347)
58 cd08250 Mgc45594_like Mgc45594 100.0 9.4E-39 2E-43 298.0 34.6 313 47-377 1-329 (329)
59 cd08285 NADP_ADH NADP(H)-depen 100.0 5.5E-39 1.2E-43 302.2 32.5 309 48-378 1-351 (351)
60 cd08263 Zn_ADH10 Alcohol dehyd 100.0 6.2E-39 1.3E-43 303.6 32.9 309 48-377 1-367 (367)
61 cd08270 MDR4 Medium chain dehy 100.0 2.1E-38 4.6E-43 292.4 33.7 302 48-378 1-305 (305)
62 cd05278 FDH_like Formaldehyde 100.0 1.7E-38 3.6E-43 298.5 32.3 308 48-378 1-347 (347)
63 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.5E-38 5.5E-43 297.6 32.7 309 48-378 1-350 (350)
64 cd05283 CAD1 Cinnamyl alcohol 100.0 2.9E-38 6.3E-43 295.6 32.9 302 49-377 1-337 (337)
65 PRK10083 putative oxidoreducta 100.0 3E-38 6.5E-43 295.8 32.8 304 48-378 1-337 (339)
66 cd08260 Zn_ADH6 Alcohol dehydr 100.0 5.1E-38 1.1E-42 295.0 33.8 307 48-377 1-344 (345)
67 cd08243 quinone_oxidoreductase 100.0 5.5E-38 1.2E-42 291.3 33.2 309 48-376 1-319 (320)
68 cd08279 Zn_ADH_class_III Class 100.0 3.8E-38 8.3E-43 297.7 32.5 309 48-375 1-362 (363)
69 PRK13771 putative alcohol dehy 100.0 2.7E-38 5.8E-43 295.6 31.1 305 48-378 1-333 (334)
70 cd08299 alcohol_DH_class_I_II_ 100.0 5.4E-38 1.2E-42 297.3 33.5 310 47-378 7-373 (373)
71 COG2130 Putative NADP-dependen 100.0 3.1E-38 6.7E-43 272.7 28.8 299 63-378 27-338 (340)
72 cd08288 MDR_yhdh Yhdh putative 100.0 9.5E-38 2.1E-42 290.6 34.4 316 48-378 1-324 (324)
73 PRK09422 ethanol-active dehydr 100.0 4.9E-38 1.1E-42 294.3 32.6 305 48-378 1-336 (338)
74 cd08276 MDR7 Medium chain dehy 100.0 1.1E-37 2.3E-42 291.5 34.5 313 48-378 1-336 (336)
75 cd08256 Zn_ADH2 Alcohol dehydr 100.0 7.8E-38 1.7E-42 294.3 33.3 305 48-376 1-350 (350)
76 cd05279 Zn_ADH1 Liver alcohol 100.0 8.9E-38 1.9E-42 295.2 33.3 307 49-376 2-364 (365)
77 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.6E-37 3.4E-42 290.7 33.7 305 48-378 1-337 (337)
78 cd05276 p53_inducible_oxidored 100.0 2.1E-37 4.5E-42 287.2 34.2 321 48-376 1-323 (323)
79 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2E-37 4.4E-42 290.5 33.4 306 48-377 1-341 (341)
80 cd08286 FDH_like_ADH2 formalde 100.0 2.8E-37 6.2E-42 289.9 33.8 307 48-378 1-345 (345)
81 cd08284 FDH_like_2 Glutathione 100.0 2.3E-37 4.9E-42 290.5 33.1 304 48-377 1-343 (344)
82 cd08259 Zn_ADH5 Alcohol dehydr 100.0 2.7E-37 5.8E-42 288.4 33.3 305 48-377 1-332 (332)
83 cd08235 iditol_2_DH_like L-idi 100.0 3.5E-37 7.7E-42 289.1 34.0 305 48-377 1-343 (343)
84 cd08253 zeta_crystallin Zeta-c 100.0 5E-37 1.1E-41 285.1 34.6 319 48-378 1-325 (325)
85 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.5E-37 9.8E-42 287.6 33.8 310 48-378 1-338 (338)
86 cd08252 AL_MDR Arginate lyase 100.0 3.7E-37 8.1E-42 288.0 33.0 319 48-377 1-336 (336)
87 cd05286 QOR2 Quinone oxidoredu 100.0 1.1E-36 2.4E-41 282.0 35.5 318 49-378 1-320 (320)
88 cd08249 enoyl_reductase_like e 100.0 1E-37 2.3E-42 292.1 28.8 312 48-378 1-339 (339)
89 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.5E-36 3.2E-41 284.1 34.3 314 48-378 1-342 (342)
90 cd08272 MDR6 Medium chain dehy 100.0 1.5E-36 3.2E-41 282.3 33.6 319 48-378 1-326 (326)
91 cd08282 PFDH_like Pseudomonas 100.0 1E-36 2.2E-41 289.1 33.1 304 48-378 1-375 (375)
92 cd08236 sugar_DH NAD(P)-depend 100.0 1.4E-36 3E-41 285.0 32.9 308 48-376 1-343 (343)
93 TIGR02824 quinone_pig3 putativ 100.0 3.8E-36 8.3E-41 279.2 35.1 323 48-378 1-325 (325)
94 cd08268 MDR2 Medium chain dehy 100.0 4.6E-36 1E-40 279.0 35.5 322 48-378 1-328 (328)
95 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.2E-36 2.6E-41 283.4 31.4 298 48-374 1-324 (325)
96 cd08273 MDR8 Medium chain dehy 100.0 2.5E-36 5.3E-41 281.9 33.2 313 49-376 2-330 (331)
97 cd08287 FDH_like_ADH3 formalde 100.0 3.3E-36 7.1E-41 282.8 32.4 306 48-378 1-345 (345)
98 cd08232 idonate-5-DH L-idonate 100.0 3.5E-36 7.5E-41 281.9 32.2 293 63-378 9-339 (339)
99 cd08234 threonine_DH_like L-th 100.0 5.9E-36 1.3E-40 279.7 33.1 301 48-376 1-333 (334)
100 PRK05396 tdh L-threonine 3-deh 100.0 5.5E-36 1.2E-40 280.8 32.1 307 48-378 1-340 (341)
101 cd08298 CAD2 Cinnamyl alcohol 100.0 7.7E-36 1.7E-40 278.4 32.2 300 48-376 1-329 (329)
102 cd08248 RTN4I1 Human Reticulon 100.0 1E-36 2.2E-41 286.7 26.4 320 48-377 1-350 (350)
103 cd05285 sorbitol_DH Sorbitol d 100.0 1.1E-35 2.3E-40 279.0 32.7 294 63-377 10-342 (343)
104 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1E-35 2.2E-40 283.1 32.0 305 48-376 29-383 (384)
105 PLN02702 L-idonate 5-dehydroge 100.0 2.3E-35 5E-40 278.9 34.1 307 47-377 17-363 (364)
106 cd08242 MDR_like Medium chain 100.0 1E-35 2.2E-40 276.5 30.7 288 48-378 1-319 (319)
107 cd05288 PGDH Prostaglandin deh 100.0 2.2E-35 4.7E-40 275.3 33.1 310 49-376 3-329 (329)
108 cd08251 polyketide_synthase po 100.0 3.3E-35 7.1E-40 270.4 32.5 298 70-376 2-303 (303)
109 cd08271 MDR5 Medium chain dehy 100.0 7.6E-35 1.7E-39 270.8 35.1 318 48-378 1-325 (325)
110 cd08245 CAD Cinnamyl alcohol d 100.0 4.5E-35 9.7E-40 273.4 32.4 302 49-376 1-330 (330)
111 cd08269 Zn_ADH9 Alcohol dehydr 100.0 3.4E-35 7.5E-40 271.8 31.3 296 63-376 7-311 (312)
112 cd08247 AST1_like AST1 is a cy 100.0 2.8E-35 6E-40 277.2 30.8 318 49-378 2-352 (352)
113 cd08241 QOR1 Quinone oxidoredu 100.0 1.4E-34 3E-39 268.5 34.2 320 48-377 1-323 (323)
114 cd05281 TDH Threonine dehydrog 100.0 5.3E-35 1.2E-39 274.1 31.4 307 48-378 1-341 (341)
115 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.3E-34 5.1E-39 265.5 30.9 277 48-343 1-306 (306)
116 TIGR00692 tdh L-threonine 3-de 100.0 3E-34 6.5E-39 268.9 31.4 295 63-378 11-340 (340)
117 cd08275 MDR3 Medium chain dehy 100.0 1.3E-33 2.7E-38 264.0 35.0 319 49-378 1-337 (337)
118 cd05289 MDR_like_2 alcohol deh 100.0 3.5E-34 7.5E-39 264.2 30.4 304 48-376 1-309 (309)
119 cd05195 enoyl_red enoyl reduct 100.0 2E-33 4.3E-38 256.6 30.9 288 76-376 1-293 (293)
120 TIGR03366 HpnZ_proposed putati 100.0 1.6E-33 3.5E-38 256.5 24.5 232 108-357 1-280 (280)
121 cd08267 MDR1 Medium chain dehy 100.0 1.2E-32 2.6E-37 255.4 30.2 295 64-376 15-319 (319)
122 smart00829 PKS_ER Enoylreducta 100.0 1.3E-32 2.8E-37 250.9 29.7 282 80-376 2-288 (288)
123 KOG1196 Predicted NAD-dependen 100.0 3.2E-31 6.9E-36 228.5 26.9 296 65-378 26-340 (343)
124 cd05188 MDR Medium chain reduc 100.0 3.4E-31 7.5E-36 239.7 27.3 236 77-319 1-260 (271)
125 KOG1202 Animal-type fatty acid 100.0 8.8E-31 1.9E-35 257.0 19.5 298 63-378 1429-1741(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 8.7E-29 1.9E-33 225.2 24.0 258 97-376 14-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.8 2E-18 4.4E-23 133.9 7.6 83 75-157 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 2.4E-17 5.3E-22 132.3 12.6 115 200-319 1-117 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 5.9E-14 1.3E-18 112.0 5.1 123 236-376 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 1.7E-11 3.6E-16 115.5 16.3 174 175-377 187-375 (413)
131 PRK09424 pntA NAD(P) transhydr 99.4 3.2E-11 6.9E-16 116.4 16.9 250 75-347 30-334 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.5 3.9E-06 8.4E-11 81.2 16.4 126 187-317 162-313 (511)
133 PRK11873 arsM arsenite S-adeno 98.5 8E-07 1.7E-11 80.5 9.9 167 184-375 73-258 (272)
134 PRK05476 S-adenosyl-L-homocyst 98.2 1.8E-05 3.9E-10 75.2 12.9 104 174-294 196-302 (425)
135 PRK08306 dipicolinate synthase 98.2 0.00013 2.7E-09 66.8 18.0 110 188-314 151-261 (296)
136 PLN02494 adenosylhomocysteinas 98.2 2.4E-05 5.2E-10 74.6 13.5 100 176-292 240-342 (477)
137 TIGR00936 ahcY adenosylhomocys 98.1 4.7E-05 1E-09 72.0 12.4 102 175-293 180-284 (406)
138 TIGR00518 alaDH alanine dehydr 98.0 0.00043 9.3E-09 65.4 16.3 148 189-346 167-330 (370)
139 PRK08324 short chain dehydroge 97.9 5.9E-05 1.3E-09 77.3 10.7 139 141-294 385-560 (681)
140 PRK05786 fabG 3-ketoacyl-(acyl 97.9 0.00012 2.7E-09 64.6 11.5 103 188-294 4-138 (238)
141 PRK00517 prmA ribosomal protei 97.9 0.00021 4.5E-09 63.9 12.8 139 126-291 66-213 (250)
142 PRK12742 oxidoreductase; Provi 97.9 0.00021 4.5E-09 63.1 12.7 103 188-294 5-134 (237)
143 PF11017 DUF2855: Protein of u 97.9 0.0028 6.2E-08 57.5 19.8 240 107-369 32-312 (314)
144 PRK12771 putative glutamate sy 97.9 6.1E-05 1.3E-09 75.5 9.3 124 185-315 133-275 (564)
145 PTZ00075 Adenosylhomocysteinas 97.8 0.00053 1.2E-08 65.8 13.5 101 176-293 240-343 (476)
146 PRK00045 hemA glutamyl-tRNA re 97.8 1.6E-05 3.4E-10 76.6 3.0 144 107-273 90-254 (423)
147 TIGR01035 hemA glutamyl-tRNA r 97.7 0.00027 5.8E-09 68.0 9.8 143 107-273 88-252 (417)
148 TIGR02853 spore_dpaA dipicolin 97.6 0.0042 9.1E-08 56.5 16.5 93 188-294 150-243 (287)
149 KOG1205 Predicted dehydrogenas 97.6 0.00089 1.9E-08 60.0 11.8 107 188-295 11-153 (282)
150 COG4221 Short-chain alcohol de 97.6 0.00051 1.1E-08 59.5 9.7 80 188-271 5-91 (246)
151 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.00053 1.2E-08 63.3 10.6 109 152-274 139-251 (311)
152 PRK07109 short chain dehydroge 97.5 0.00087 1.9E-08 62.6 11.2 80 188-271 7-95 (334)
153 PRK05993 short chain dehydroge 97.5 0.0015 3.2E-08 59.3 12.3 78 188-271 3-86 (277)
154 PLN03209 translocon at the inn 97.5 0.0012 2.6E-08 65.0 12.2 109 179-294 70-210 (576)
155 PRK06139 short chain dehydroge 97.5 0.00036 7.7E-09 65.1 8.2 80 188-271 6-94 (330)
156 PF13460 NAD_binding_10: NADH( 97.5 0.00082 1.8E-08 56.7 9.8 93 192-294 1-100 (183)
157 PRK05693 short chain dehydroge 97.5 0.002 4.3E-08 58.3 12.6 78 190-271 2-82 (274)
158 PRK07533 enoyl-(acyl carrier p 97.5 0.0017 3.7E-08 58.2 11.9 83 188-271 9-98 (258)
159 PRK06182 short chain dehydroge 97.4 0.0024 5.1E-08 57.8 12.5 80 188-271 2-84 (273)
160 COG2518 Pcm Protein-L-isoaspar 97.4 0.00066 1.4E-08 57.7 8.1 105 180-292 64-170 (209)
161 PRK12939 short chain dehydroge 97.4 0.0014 3E-08 58.2 10.6 80 188-271 6-94 (250)
162 PRK07060 short chain dehydroge 97.4 0.0012 2.5E-08 58.6 9.8 79 188-271 8-87 (245)
163 PRK08415 enoyl-(acyl carrier p 97.4 0.0019 4.1E-08 58.5 11.3 106 188-294 4-146 (274)
164 PRK06198 short chain dehydroge 97.4 0.006 1.3E-07 54.6 14.4 84 188-271 5-94 (260)
165 KOG1201 Hydroxysteroid 17-beta 97.4 0.0016 3.5E-08 58.1 9.9 82 187-271 36-124 (300)
166 PRK13394 3-hydroxybutyrate deh 97.4 0.0026 5.6E-08 57.0 11.7 84 188-271 6-94 (262)
167 PRK08339 short chain dehydroge 97.3 0.0019 4.2E-08 58.1 10.4 80 188-271 7-95 (263)
168 PRK08265 short chain dehydroge 97.3 0.0039 8.5E-08 55.9 11.9 80 188-271 5-90 (261)
169 PRK05866 short chain dehydroge 97.3 0.0016 3.4E-08 59.7 9.2 79 189-271 40-127 (293)
170 PRK07806 short chain dehydroge 97.2 0.0062 1.3E-07 54.1 12.7 105 188-292 5-135 (248)
171 PRK08217 fabG 3-ketoacyl-(acyl 97.2 0.0014 3.1E-08 58.2 8.6 84 188-271 4-92 (253)
172 PRK06128 oxidoreductase; Provi 97.2 0.004 8.7E-08 57.2 11.7 107 188-294 54-194 (300)
173 PRK07326 short chain dehydroge 97.2 0.0032 6.9E-08 55.5 10.3 80 188-271 5-92 (237)
174 COG0300 DltE Short-chain dehyd 97.2 0.0021 4.5E-08 57.2 8.8 81 187-271 4-94 (265)
175 COG3967 DltE Short-chain dehyd 97.2 0.0024 5.3E-08 53.7 8.5 77 188-271 4-88 (245)
176 PRK00377 cbiT cobalt-precorrin 97.2 0.0056 1.2E-07 52.6 11.3 99 183-290 35-144 (198)
177 PRK06505 enoyl-(acyl carrier p 97.2 0.0017 3.7E-08 58.7 8.5 83 188-271 6-95 (271)
178 PRK07231 fabG 3-ketoacyl-(acyl 97.2 0.0043 9.4E-08 55.1 11.0 80 188-271 4-91 (251)
179 PRK07832 short chain dehydroge 97.2 0.0058 1.3E-07 55.2 11.7 77 191-271 2-88 (272)
180 PF00670 AdoHcyase_NAD: S-aden 97.2 0.021 4.5E-07 46.8 13.4 100 176-292 9-111 (162)
181 PRK06125 short chain dehydroge 97.1 0.0025 5.4E-08 57.1 9.0 80 188-271 6-91 (259)
182 PRK06181 short chain dehydroge 97.1 0.003 6.5E-08 56.6 9.6 83 189-271 1-88 (263)
183 PRK11705 cyclopropane fatty ac 97.1 0.0029 6.4E-08 60.0 9.8 107 173-291 152-267 (383)
184 PRK09291 short chain dehydroge 97.1 0.0025 5.4E-08 56.9 9.0 77 189-271 2-83 (257)
185 COG2230 Cfa Cyclopropane fatty 97.1 0.0052 1.1E-07 55.0 10.5 117 159-293 49-178 (283)
186 PRK05872 short chain dehydroge 97.1 0.0027 5.9E-08 58.2 9.2 80 188-271 8-95 (296)
187 PRK12828 short chain dehydroge 97.1 0.0028 6E-08 55.8 8.9 84 188-271 6-92 (239)
188 PRK08340 glucose-1-dehydrogena 97.1 0.002 4.4E-08 57.7 8.0 77 191-271 2-86 (259)
189 PRK12829 short chain dehydroge 97.1 0.0038 8.2E-08 55.9 9.6 85 184-272 6-97 (264)
190 PRK07814 short chain dehydroge 97.1 0.0027 5.9E-08 57.0 8.5 80 188-271 9-97 (263)
191 PRK08594 enoyl-(acyl carrier p 97.1 0.013 2.9E-07 52.5 12.9 106 188-294 6-150 (257)
192 PRK08267 short chain dehydroge 97.1 0.0089 1.9E-07 53.5 11.8 78 190-271 2-87 (260)
193 PRK06196 oxidoreductase; Provi 97.0 0.0032 6.9E-08 58.3 9.0 80 188-271 25-109 (315)
194 PRK12367 short chain dehydroge 97.0 0.004 8.6E-08 55.4 9.3 77 188-271 13-89 (245)
195 PRK06914 short chain dehydroge 97.0 0.011 2.3E-07 53.7 12.3 83 189-271 3-91 (280)
196 PRK06057 short chain dehydroge 97.0 0.0035 7.5E-08 56.0 9.0 80 188-271 6-89 (255)
197 PRK06194 hypothetical protein; 97.0 0.004 8.7E-08 56.7 9.5 84 188-271 5-93 (287)
198 PRK05876 short chain dehydroge 97.0 0.0028 6E-08 57.5 8.4 84 188-271 5-93 (275)
199 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0029 6.3E-08 53.3 7.9 88 187-291 34-127 (178)
200 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.0081 1.7E-07 58.6 12.1 82 188-271 209-294 (450)
201 PRK06079 enoyl-(acyl carrier p 97.0 0.011 2.4E-07 52.7 12.0 103 188-294 6-146 (252)
202 PF01488 Shikimate_DH: Shikima 97.0 0.0032 6.9E-08 50.5 7.6 91 188-291 11-109 (135)
203 PRK07825 short chain dehydroge 97.0 0.0043 9.3E-08 56.1 9.3 79 189-271 5-88 (273)
204 PRK05867 short chain dehydroge 97.0 0.0035 7.5E-08 55.9 8.5 80 188-271 8-96 (253)
205 PRK07677 short chain dehydroge 97.0 0.0035 7.5E-08 55.9 8.2 83 189-271 1-88 (252)
206 PRK06949 short chain dehydroge 97.0 0.0054 1.2E-07 54.8 9.5 81 187-271 7-96 (258)
207 PRK06701 short chain dehydroge 97.0 0.011 2.5E-07 53.9 11.8 108 187-294 44-184 (290)
208 PRK12481 2-deoxy-D-gluconate 3 97.0 0.0048 1E-07 55.1 9.1 82 188-271 7-93 (251)
209 PRK06172 short chain dehydroge 97.0 0.0039 8.5E-08 55.5 8.6 84 188-271 6-94 (253)
210 PRK07478 short chain dehydroge 97.0 0.005 1.1E-07 55.0 9.2 80 188-271 5-93 (254)
211 PRK07904 short chain dehydroge 97.0 0.0049 1.1E-07 55.1 9.1 85 186-271 5-97 (253)
212 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.013 2.9E-07 50.0 11.4 78 188-273 27-109 (194)
213 PRK07831 short chain dehydroge 96.9 0.0043 9.3E-08 55.7 8.7 86 186-271 14-107 (262)
214 PLN02657 3,8-divinyl protochlo 96.9 0.011 2.4E-07 56.5 11.9 110 184-293 55-183 (390)
215 PF05368 NmrA: NmrA-like famil 96.9 0.0083 1.8E-07 52.8 10.3 74 192-271 1-74 (233)
216 PRK05854 short chain dehydroge 96.9 0.0042 9.2E-08 57.4 8.6 35 188-222 13-47 (313)
217 PRK07062 short chain dehydroge 96.9 0.0041 8.8E-08 55.9 8.3 35 188-222 7-41 (265)
218 TIGR01832 kduD 2-deoxy-D-gluco 96.9 0.0062 1.3E-07 54.1 9.4 82 188-271 4-90 (248)
219 PRK07576 short chain dehydroge 96.9 0.0051 1.1E-07 55.3 8.9 80 188-271 8-96 (264)
220 PRK06200 2,3-dihydroxy-2,3-dih 96.9 0.0062 1.4E-07 54.6 9.3 80 188-271 5-90 (263)
221 PRK12937 short chain dehydroge 96.9 0.017 3.8E-07 51.0 12.1 106 188-293 4-141 (245)
222 PRK07890 short chain dehydroge 96.9 0.0048 1E-07 55.1 8.5 81 187-271 3-92 (258)
223 PRK06720 hypothetical protein; 96.9 0.0092 2E-07 49.8 9.5 84 188-271 15-103 (169)
224 PRK07774 short chain dehydroge 96.9 0.0053 1.1E-07 54.5 8.7 84 188-271 5-93 (250)
225 PF02353 CMAS: Mycolic acid cy 96.9 0.0016 3.5E-08 58.7 5.3 102 176-291 50-166 (273)
226 PRK07523 gluconate 5-dehydroge 96.9 0.0056 1.2E-07 54.7 8.8 84 188-271 9-97 (255)
227 PRK12938 acetyacetyl-CoA reduc 96.9 0.012 2.6E-07 52.2 10.8 82 188-271 2-91 (246)
228 PRK06935 2-deoxy-D-gluconate 3 96.9 0.0072 1.6E-07 54.1 9.5 83 188-271 14-101 (258)
229 PRK06484 short chain dehydroge 96.9 0.013 2.8E-07 58.3 12.2 103 188-294 268-403 (520)
230 PRK06138 short chain dehydroge 96.9 0.0045 9.8E-08 55.0 8.1 80 188-271 4-91 (252)
231 PRK06197 short chain dehydroge 96.9 0.004 8.7E-08 57.3 7.9 35 188-222 15-49 (306)
232 TIGR00406 prmA ribosomal prote 96.9 0.0097 2.1E-07 54.3 10.3 144 126-291 105-259 (288)
233 PRK09072 short chain dehydroge 96.9 0.0046 9.9E-08 55.5 8.1 80 188-271 4-90 (263)
234 PRK08264 short chain dehydroge 96.8 0.0081 1.8E-07 52.9 9.5 77 188-271 5-83 (238)
235 PRK08862 short chain dehydroge 96.8 0.0059 1.3E-07 53.7 8.5 83 188-270 4-92 (227)
236 PRK06483 dihydromonapterin red 96.8 0.0073 1.6E-07 53.2 9.2 79 189-271 2-84 (236)
237 PRK06603 enoyl-(acyl carrier p 96.8 0.0051 1.1E-07 55.2 8.1 83 188-271 7-96 (260)
238 TIGR03325 BphB_TodD cis-2,3-di 96.8 0.0081 1.7E-07 53.9 9.4 80 188-271 4-89 (262)
239 PRK08277 D-mannonate oxidoredu 96.8 0.006 1.3E-07 55.2 8.6 83 188-270 9-96 (278)
240 PRK08690 enoyl-(acyl carrier p 96.8 0.0067 1.4E-07 54.5 8.8 83 188-271 5-94 (261)
241 PRK08159 enoyl-(acyl carrier p 96.8 0.0079 1.7E-07 54.4 9.3 85 186-271 7-98 (272)
242 PRK07370 enoyl-(acyl carrier p 96.8 0.019 4.1E-07 51.4 11.7 107 188-294 5-150 (258)
243 PRK07063 short chain dehydroge 96.8 0.006 1.3E-07 54.6 8.4 35 188-222 6-40 (260)
244 PRK08177 short chain dehydroge 96.8 0.0065 1.4E-07 53.1 8.3 77 190-271 2-81 (225)
245 CHL00194 ycf39 Ycf39; Provisio 96.8 0.02 4.3E-07 53.1 12.0 95 191-293 2-111 (317)
246 PRK06463 fabG 3-ketoacyl-(acyl 96.8 0.0095 2.1E-07 53.2 9.5 81 188-271 6-89 (255)
247 PRK14175 bifunctional 5,10-met 96.8 0.018 3.9E-07 51.9 11.0 96 167-293 136-232 (286)
248 PRK13943 protein-L-isoaspartat 96.8 0.012 2.7E-07 54.3 10.2 99 182-290 74-179 (322)
249 PRK08628 short chain dehydroge 96.8 0.008 1.7E-07 53.7 8.9 83 188-271 6-93 (258)
250 PRK06500 short chain dehydroge 96.8 0.0093 2E-07 52.9 9.3 80 188-271 5-90 (249)
251 PRK08017 oxidoreductase; Provi 96.8 0.0084 1.8E-07 53.4 9.0 76 190-271 3-84 (256)
252 PRK08213 gluconate 5-dehydroge 96.8 0.008 1.7E-07 53.8 8.9 80 188-271 11-99 (259)
253 PRK12747 short chain dehydroge 96.8 0.029 6.4E-07 49.9 12.5 33 188-220 3-35 (252)
254 PRK07454 short chain dehydroge 96.8 0.0091 2E-07 52.8 9.1 81 187-271 4-93 (241)
255 PRK07985 oxidoreductase; Provi 96.8 0.021 4.6E-07 52.3 11.7 107 188-294 48-188 (294)
256 TIGR02622 CDP_4_6_dhtase CDP-g 96.7 0.013 2.7E-07 55.1 10.5 82 188-271 3-85 (349)
257 PRK08589 short chain dehydroge 96.7 0.0093 2E-07 53.9 9.2 83 188-271 5-92 (272)
258 PRK12826 3-ketoacyl-(acyl-carr 96.7 0.0072 1.6E-07 53.6 8.4 84 188-271 5-93 (251)
259 COG1748 LYS9 Saccharopine dehy 96.7 0.014 3E-07 54.9 10.3 94 190-291 2-99 (389)
260 PRK06180 short chain dehydroge 96.7 0.011 2.4E-07 53.6 9.6 80 188-271 3-88 (277)
261 PLN02253 xanthoxin dehydrogena 96.7 0.0079 1.7E-07 54.5 8.6 80 188-271 17-104 (280)
262 PRK06841 short chain dehydroge 96.7 0.01 2.2E-07 53.0 9.1 80 188-271 14-99 (255)
263 PRK08993 2-deoxy-D-gluconate 3 96.7 0.011 2.3E-07 52.8 9.3 82 188-271 9-95 (253)
264 PRK07035 short chain dehydroge 96.7 0.0079 1.7E-07 53.5 8.4 84 188-271 7-95 (252)
265 PRK08303 short chain dehydroge 96.7 0.011 2.3E-07 54.6 9.4 35 188-222 7-41 (305)
266 PRK06997 enoyl-(acyl carrier p 96.7 0.0077 1.7E-07 54.1 8.2 83 188-271 5-94 (260)
267 KOG0725 Reductases with broad 96.7 0.01 2.2E-07 53.5 9.0 85 187-271 6-99 (270)
268 PRK08085 gluconate 5-dehydroge 96.7 0.0088 1.9E-07 53.3 8.6 84 188-271 8-96 (254)
269 PRK12429 3-hydroxybutyrate deh 96.7 0.0099 2.1E-07 53.0 8.9 84 188-271 3-91 (258)
270 PRK07024 short chain dehydroge 96.7 0.0073 1.6E-07 54.0 7.9 79 189-271 2-88 (257)
271 PRK08643 acetoin reductase; Va 96.7 0.0099 2.1E-07 53.0 8.7 83 189-271 2-89 (256)
272 PRK06113 7-alpha-hydroxysteroi 96.6 0.01 2.2E-07 53.0 8.7 80 188-271 10-98 (255)
273 PRK07097 gluconate 5-dehydroge 96.6 0.012 2.6E-07 52.8 9.2 84 188-271 9-97 (265)
274 PLN02780 ketoreductase/ oxidor 96.6 0.0097 2.1E-07 55.2 8.7 79 188-271 52-142 (320)
275 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.02 4.3E-07 47.6 9.6 96 166-292 21-117 (168)
276 PRK07791 short chain dehydroge 96.6 0.015 3.3E-07 52.9 9.9 36 187-222 4-39 (286)
277 PRK08063 enoyl-(acyl carrier p 96.6 0.0084 1.8E-07 53.2 8.0 81 188-271 3-92 (250)
278 PRK06114 short chain dehydroge 96.6 0.018 3.8E-07 51.4 10.0 84 188-271 7-96 (254)
279 PRK09242 tropinone reductase; 96.6 0.011 2.5E-07 52.7 8.6 35 188-222 8-42 (257)
280 PRK07424 bifunctional sterol d 96.6 0.016 3.4E-07 55.4 9.8 77 188-271 177-255 (406)
281 PRK06718 precorrin-2 dehydroge 96.6 0.057 1.2E-06 46.4 12.4 92 188-291 9-100 (202)
282 PRK07984 enoyl-(acyl carrier p 96.6 0.018 3.8E-07 51.9 9.7 82 188-270 5-93 (262)
283 PRK05653 fabG 3-ketoacyl-(acyl 96.6 0.015 3.3E-07 51.2 9.2 84 188-271 4-92 (246)
284 PRK05717 oxidoreductase; Valid 96.6 0.019 4.2E-07 51.2 9.9 80 188-271 9-94 (255)
285 PRK12823 benD 1,6-dihydroxycyc 96.5 0.0096 2.1E-07 53.3 7.9 83 188-271 7-94 (260)
286 PRK06077 fabG 3-ketoacyl-(acyl 96.5 0.035 7.6E-07 49.2 11.4 104 189-294 6-143 (252)
287 PRK07666 fabG 3-ketoacyl-(acyl 96.5 0.015 3.2E-07 51.3 8.9 84 188-271 6-94 (239)
288 PRK08416 7-alpha-hydroxysteroi 96.5 0.014 3E-07 52.3 8.7 80 188-270 7-96 (260)
289 PRK08703 short chain dehydroge 96.5 0.01 2.3E-07 52.3 7.8 35 188-222 5-39 (239)
290 PRK12384 sorbitol-6-phosphate 96.5 0.014 3E-07 52.2 8.7 34 189-222 2-35 (259)
291 COG2264 PrmA Ribosomal protein 96.5 0.037 8.1E-07 50.0 11.2 147 127-293 109-265 (300)
292 PRK07856 short chain dehydroge 96.5 0.015 3.2E-07 51.9 8.7 35 188-222 5-39 (252)
293 PRK10538 malonic semialdehyde 96.5 0.05 1.1E-06 48.3 12.1 77 191-271 2-84 (248)
294 PRK07453 protochlorophyllide o 96.5 0.018 3.8E-07 53.5 9.5 34 188-221 5-38 (322)
295 PF01262 AlaDh_PNT_C: Alanine 96.5 0.014 3E-07 48.7 7.9 100 190-297 21-145 (168)
296 PF12847 Methyltransf_18: Meth 96.5 0.0061 1.3E-07 46.8 5.3 92 188-290 1-110 (112)
297 PRK13656 trans-2-enoyl-CoA red 96.5 0.042 9.1E-07 51.6 11.6 85 187-272 39-142 (398)
298 KOG1502 Flavonol reductase/cin 96.5 0.022 4.7E-07 52.1 9.4 80 188-271 5-88 (327)
299 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.0057 1.2E-07 59.6 6.3 94 182-294 27-126 (450)
300 PRK07775 short chain dehydroge 96.5 0.018 4E-07 52.0 9.2 80 188-271 9-97 (274)
301 KOG1200 Mitochondrial/plastidi 96.5 0.022 4.7E-07 47.7 8.5 79 190-271 15-100 (256)
302 PRK08226 short chain dehydroge 96.5 0.017 3.6E-07 51.8 8.9 83 188-271 5-92 (263)
303 PF01135 PCMT: Protein-L-isoas 96.5 0.0054 1.2E-07 52.9 5.4 104 180-291 64-172 (209)
304 COG2242 CobL Precorrin-6B meth 96.4 0.027 5.8E-07 47.0 9.1 98 184-291 30-135 (187)
305 PRK05875 short chain dehydroge 96.4 0.013 2.9E-07 52.9 8.2 35 188-222 6-40 (276)
306 PRK08219 short chain dehydroge 96.4 0.026 5.7E-07 49.1 9.8 77 190-271 4-81 (227)
307 PRK06124 gluconate 5-dehydroge 96.4 0.016 3.4E-07 51.7 8.5 84 188-271 10-98 (256)
308 PRK13942 protein-L-isoaspartat 96.4 0.025 5.5E-07 49.1 9.5 99 181-291 69-176 (212)
309 PRK06940 short chain dehydroge 96.4 0.041 8.8E-07 49.8 11.2 103 189-293 2-127 (275)
310 PRK08945 putative oxoacyl-(acy 96.4 0.011 2.3E-07 52.5 7.3 37 186-222 9-45 (247)
311 TIGR03206 benzo_BadH 2-hydroxy 96.4 0.021 4.5E-07 50.6 9.1 84 188-271 2-90 (250)
312 PRK06482 short chain dehydroge 96.4 0.025 5.5E-07 51.1 9.8 78 190-271 3-86 (276)
313 PRK12743 oxidoreductase; Provi 96.4 0.016 3.5E-07 51.7 8.4 83 189-271 2-90 (256)
314 PF02670 DXP_reductoisom: 1-de 96.4 0.085 1.8E-06 41.6 11.2 96 192-289 1-119 (129)
315 PRK08278 short chain dehydroge 96.4 0.016 3.5E-07 52.4 8.4 36 188-223 5-40 (273)
316 PLN02989 cinnamyl-alcohol dehy 96.4 0.029 6.2E-07 52.1 10.1 81 188-271 4-87 (325)
317 PRK08263 short chain dehydroge 96.4 0.026 5.5E-07 51.1 9.5 79 189-271 3-87 (275)
318 PRK08220 2,3-dihydroxybenzoate 96.4 0.056 1.2E-06 47.9 11.6 75 188-271 7-86 (252)
319 PRK07792 fabG 3-ketoacyl-(acyl 96.3 0.023 5E-07 52.3 9.2 83 188-271 11-99 (306)
320 PRK09186 flagellin modificatio 96.3 0.021 4.5E-07 50.9 8.6 35 188-222 3-37 (256)
321 PRK05650 short chain dehydroge 96.3 0.024 5.2E-07 51.1 9.1 81 191-271 2-87 (270)
322 PRK06719 precorrin-2 dehydroge 96.3 0.051 1.1E-06 44.7 10.0 89 188-291 12-100 (157)
323 PRK07067 sorbitol dehydrogenas 96.3 0.026 5.6E-07 50.4 9.1 80 188-271 5-90 (257)
324 PLN00141 Tic62-NAD(P)-related 96.3 0.063 1.4E-06 47.8 11.5 99 188-293 16-133 (251)
325 TIGR01470 cysG_Nterm siroheme 96.3 0.11 2.4E-06 44.8 12.5 92 188-291 8-100 (205)
326 PRK09134 short chain dehydroge 96.3 0.028 6.1E-07 50.2 9.2 81 188-271 8-97 (258)
327 PRK09135 pteridine reductase; 96.3 0.028 6.1E-07 49.7 9.1 35 188-222 5-39 (249)
328 TIGR02469 CbiT precorrin-6Y C5 96.3 0.044 9.5E-07 42.6 9.3 98 183-291 14-122 (124)
329 PRK12936 3-ketoacyl-(acyl-carr 96.2 0.037 8.1E-07 48.8 9.8 80 188-271 5-90 (245)
330 PLN02986 cinnamyl-alcohol dehy 96.2 0.035 7.6E-07 51.4 9.9 81 187-271 3-87 (322)
331 PRK08936 glucose-1-dehydrogena 96.2 0.024 5.3E-07 50.7 8.6 84 188-271 6-95 (261)
332 PRK06179 short chain dehydroge 96.2 0.017 3.8E-07 51.9 7.7 77 188-271 3-83 (270)
333 PRK05599 hypothetical protein; 96.2 0.019 4.1E-07 51.0 7.8 80 191-271 2-87 (246)
334 PLN02730 enoyl-[acyl-carrier-p 96.2 0.067 1.4E-06 49.2 11.5 31 188-218 8-40 (303)
335 PRK06398 aldose dehydrogenase; 96.2 0.021 4.6E-07 51.1 8.0 35 188-222 5-39 (258)
336 PRK03369 murD UDP-N-acetylmura 96.2 0.027 5.8E-07 55.5 9.4 74 186-273 9-82 (488)
337 PLN02896 cinnamyl-alcohol dehy 96.2 0.03 6.5E-07 52.7 9.3 78 187-271 8-89 (353)
338 KOG1210 Predicted 3-ketosphing 96.2 0.048 1E-06 49.2 9.8 85 184-272 28-123 (331)
339 PRK13944 protein-L-isoaspartat 96.2 0.027 5.9E-07 48.6 8.2 98 182-291 66-173 (205)
340 PRK07074 short chain dehydroge 96.2 0.025 5.3E-07 50.5 8.3 79 189-271 2-87 (257)
341 PRK07041 short chain dehydroge 96.2 0.019 4.2E-07 50.2 7.4 75 193-271 1-79 (230)
342 PRK06484 short chain dehydroge 96.2 0.025 5.4E-07 56.3 9.0 80 188-271 4-89 (520)
343 PRK12935 acetoacetyl-CoA reduc 96.2 0.039 8.6E-07 48.8 9.5 81 188-271 5-94 (247)
344 PRK12744 short chain dehydroge 96.1 0.036 7.8E-07 49.5 9.2 84 188-271 7-99 (257)
345 TIGR00507 aroE shikimate 5-deh 96.1 0.049 1.1E-06 49.2 10.1 102 176-292 104-215 (270)
346 PF00106 adh_short: short chai 96.1 0.028 6.1E-07 46.4 7.9 81 190-271 1-90 (167)
347 PRK15181 Vi polysaccharide bio 96.1 0.043 9.2E-07 51.6 10.0 93 175-271 2-100 (348)
348 PRK12825 fabG 3-ketoacyl-(acyl 96.1 0.029 6.3E-07 49.5 8.5 35 188-222 5-39 (249)
349 COG0373 HemA Glutamyl-tRNA red 96.1 0.48 1E-05 45.0 16.6 93 187-291 176-274 (414)
350 KOG1610 Corticosteroid 11-beta 96.1 0.1 2.2E-06 47.1 11.5 84 186-270 26-115 (322)
351 TIGR01289 LPOR light-dependent 96.1 0.045 9.7E-07 50.7 9.8 79 189-271 3-91 (314)
352 PRK12745 3-ketoacyl-(acyl-carr 96.1 0.035 7.6E-07 49.4 8.8 82 190-271 3-90 (256)
353 TIGR00080 pimt protein-L-isoas 96.1 0.049 1.1E-06 47.4 9.5 100 180-291 69-177 (215)
354 PRK04148 hypothetical protein; 96.1 0.063 1.4E-06 42.6 9.0 81 186-278 14-94 (134)
355 TIGR02415 23BDH acetoin reduct 96.1 0.031 6.8E-07 49.6 8.4 82 190-271 1-87 (254)
356 PRK05565 fabG 3-ketoacyl-(acyl 96.0 0.032 6.9E-07 49.3 8.3 83 189-271 5-93 (247)
357 PRK05855 short chain dehydroge 96.0 0.028 6.1E-07 56.5 8.9 84 188-271 314-402 (582)
358 PRK08251 short chain dehydroge 96.0 0.04 8.6E-07 48.8 8.9 34 189-222 2-35 (248)
359 PRK07889 enoyl-(acyl carrier p 96.0 0.046 1E-06 48.9 9.4 82 188-271 6-95 (256)
360 PLN02240 UDP-glucose 4-epimera 96.0 0.052 1.1E-06 50.9 10.1 82 189-271 5-91 (352)
361 TIGR01963 PHB_DH 3-hydroxybuty 96.0 0.039 8.5E-07 49.0 8.8 34 189-222 1-34 (255)
362 PRK06953 short chain dehydroge 96.0 0.044 9.6E-07 47.7 9.0 77 190-271 2-80 (222)
363 PRK12746 short chain dehydroge 96.0 0.044 9.6E-07 48.7 9.1 33 188-220 5-37 (254)
364 PLN02662 cinnamyl-alcohol dehy 96.0 0.051 1.1E-06 50.3 9.8 79 188-270 3-85 (322)
365 PRK06523 short chain dehydroge 96.0 0.034 7.3E-07 49.7 8.3 35 188-222 8-42 (260)
366 TIGR02632 RhaD_aldol-ADH rhamn 96.0 0.034 7.3E-07 57.1 9.2 114 143-271 379-503 (676)
367 PRK05447 1-deoxy-D-xylulose 5- 96.0 0.11 2.4E-06 48.8 11.6 99 190-290 2-121 (385)
368 PRK07578 short chain dehydroge 95.9 0.093 2E-06 44.8 10.4 64 191-271 2-65 (199)
369 PRK05884 short chain dehydroge 95.9 0.047 1E-06 47.7 8.6 74 191-270 2-78 (223)
370 PRK14189 bifunctional 5,10-met 95.9 0.081 1.8E-06 47.7 10.1 97 167-293 136-232 (285)
371 PRK14191 bifunctional 5,10-met 95.9 0.13 2.8E-06 46.4 11.3 97 167-293 135-231 (285)
372 PRK10792 bifunctional 5,10-met 95.8 0.093 2E-06 47.3 10.2 95 168-292 138-232 (285)
373 PRK05557 fabG 3-ketoacyl-(acyl 95.8 0.065 1.4E-06 47.2 9.4 84 188-271 4-93 (248)
374 PF02254 TrkA_N: TrkA-N domain 95.8 0.2 4.4E-06 38.6 11.1 92 192-291 1-96 (116)
375 TIGR01829 AcAcCoA_reduct aceto 95.8 0.041 8.9E-07 48.4 8.0 32 190-221 1-32 (242)
376 KOG1209 1-Acyl dihydroxyaceton 95.8 0.094 2E-06 44.6 9.3 101 188-294 6-141 (289)
377 TIGR01179 galE UDP-glucose-4-e 95.8 0.046 1E-06 50.4 8.7 80 191-271 1-80 (328)
378 PRK08642 fabG 3-ketoacyl-(acyl 95.8 0.062 1.3E-06 47.7 9.2 33 189-221 5-37 (253)
379 COG3288 PntA NAD/NADP transhyd 95.8 0.23 5.1E-06 44.6 12.3 154 186-344 161-337 (356)
380 KOG1208 Dehydrogenases with di 95.8 0.041 9E-07 50.6 8.0 85 187-271 33-124 (314)
381 COG4122 Predicted O-methyltran 95.8 0.069 1.5E-06 46.2 8.9 104 181-291 52-166 (219)
382 PRK06101 short chain dehydroge 95.8 0.077 1.7E-06 46.9 9.6 77 190-270 2-80 (240)
383 PRK07102 short chain dehydroge 95.8 0.038 8.3E-07 48.8 7.6 33 190-222 2-34 (243)
384 PRK13940 glutamyl-tRNA reducta 95.8 0.13 2.7E-06 49.4 11.5 76 187-274 179-255 (414)
385 PRK12827 short chain dehydroge 95.8 0.086 1.9E-06 46.5 9.9 84 188-271 5-97 (249)
386 PLN00198 anthocyanidin reducta 95.8 0.061 1.3E-06 50.2 9.3 79 188-270 8-89 (338)
387 PRK06947 glucose-1-dehydrogena 95.8 0.057 1.2E-06 47.8 8.7 79 190-271 3-90 (248)
388 PRK14192 bifunctional 5,10-met 95.7 0.12 2.6E-06 46.9 10.6 95 169-293 139-233 (283)
389 TIGR02685 pter_reduc_Leis pter 95.7 0.045 9.7E-07 49.2 8.0 32 190-221 2-33 (267)
390 PRK12824 acetoacetyl-CoA reduc 95.7 0.08 1.7E-06 46.6 9.5 80 190-271 3-90 (245)
391 cd05212 NAD_bind_m-THF_DH_Cycl 95.7 0.14 3.1E-06 41.1 9.8 95 168-292 7-101 (140)
392 PLN02653 GDP-mannose 4,6-dehyd 95.7 0.039 8.4E-07 51.6 7.6 83 188-271 5-93 (340)
393 PLN02686 cinnamoyl-CoA reducta 95.7 0.077 1.7E-06 50.3 9.6 36 187-222 51-86 (367)
394 PRK09730 putative NAD(P)-bindi 95.7 0.06 1.3E-06 47.5 8.5 79 190-271 2-89 (247)
395 TIGR03589 PseB UDP-N-acetylglu 95.7 0.059 1.3E-06 50.1 8.7 77 188-271 3-84 (324)
396 PRK07201 short chain dehydroge 95.7 0.05 1.1E-06 55.8 9.0 79 189-271 371-458 (657)
397 PLN02928 oxidoreductase family 95.7 0.06 1.3E-06 50.5 8.7 97 188-291 158-262 (347)
398 PRK00107 gidB 16S rRNA methylt 95.6 0.085 1.8E-06 44.8 8.7 96 185-291 42-145 (187)
399 PLN02650 dihydroflavonol-4-red 95.6 0.086 1.9E-06 49.5 9.8 79 188-270 4-86 (351)
400 PLN02214 cinnamoyl-CoA reducta 95.6 0.088 1.9E-06 49.3 9.7 79 188-271 9-91 (342)
401 PRK08309 short chain dehydroge 95.6 0.29 6.3E-06 41.1 11.8 90 191-285 2-99 (177)
402 PRK12548 shikimate 5-dehydroge 95.6 0.14 3E-06 46.7 10.7 101 187-291 124-236 (289)
403 PF03435 Saccharop_dh: Sacchar 95.6 0.13 2.9E-06 49.0 11.1 91 192-290 1-97 (386)
404 KOG1199 Short-chain alcohol de 95.6 0.057 1.2E-06 44.1 7.0 83 187-272 7-94 (260)
405 PRK11207 tellurite resistance 95.6 0.048 1E-06 46.7 7.2 96 184-291 26-134 (197)
406 PRK06171 sorbitol-6-phosphate 95.6 0.048 1E-06 48.9 7.5 35 188-222 8-42 (266)
407 COG1179 Dinucleotide-utilizing 95.6 0.14 3E-06 44.5 9.7 104 189-295 30-157 (263)
408 PRK10675 UDP-galactose-4-epime 95.5 0.11 2.4E-06 48.4 10.1 80 191-271 2-83 (338)
409 COG0031 CysK Cysteine synthase 95.5 0.1 2.2E-06 47.3 9.2 60 184-245 57-116 (300)
410 cd01075 NAD_bind_Leu_Phe_Val_D 95.5 0.36 7.8E-06 41.4 12.4 80 187-282 26-107 (200)
411 COG1648 CysG Siroheme synthase 95.5 0.25 5.5E-06 42.6 11.3 117 188-317 11-129 (210)
412 PRK14194 bifunctional 5,10-met 95.5 0.15 3.3E-06 46.3 10.3 96 167-293 137-233 (301)
413 TIGR01472 gmd GDP-mannose 4,6- 95.5 0.068 1.5E-06 50.0 8.5 81 190-271 1-88 (343)
414 PF02882 THF_DHG_CYH_C: Tetrah 95.5 0.071 1.5E-06 43.8 7.4 97 167-293 14-110 (160)
415 PRK06123 short chain dehydroge 95.4 0.087 1.9E-06 46.6 8.6 80 189-271 2-90 (248)
416 cd01065 NAD_bind_Shikimate_DH 95.4 0.15 3.3E-06 41.5 9.4 95 187-293 17-118 (155)
417 PRK14188 bifunctional 5,10-met 95.4 0.14 2.9E-06 46.7 9.6 96 167-293 136-232 (296)
418 PLN02427 UDP-apiose/xylose syn 95.4 0.098 2.1E-06 49.9 9.3 76 188-270 13-95 (386)
419 KOG2017 Molybdopterin synthase 95.3 0.046 9.9E-07 49.7 6.3 81 190-274 67-169 (427)
420 PRK10217 dTDP-glucose 4,6-dehy 95.3 0.095 2.1E-06 49.3 9.0 80 190-271 2-84 (355)
421 TIGR01181 dTDP_gluc_dehyt dTDP 95.3 0.08 1.7E-06 48.6 8.3 78 191-271 1-83 (317)
422 PRK14176 bifunctional 5,10-met 95.3 0.17 3.7E-06 45.7 9.9 96 167-293 142-238 (287)
423 KOG1014 17 beta-hydroxysteroid 95.3 0.14 3E-06 46.2 9.2 79 187-271 47-136 (312)
424 PF01370 Epimerase: NAD depend 95.3 0.057 1.2E-06 47.3 6.9 76 192-272 1-76 (236)
425 TIGR01318 gltD_gamma_fam gluta 95.3 0.079 1.7E-06 51.9 8.4 81 188-272 140-237 (467)
426 TIGR02355 moeB molybdopterin s 95.3 0.15 3.3E-06 45.1 9.4 85 190-278 25-131 (240)
427 PF06325 PrmA: Ribosomal prote 95.3 0.057 1.2E-06 49.1 6.8 145 127-293 108-261 (295)
428 PRK08328 hypothetical protein; 95.2 0.22 4.9E-06 43.8 10.5 97 189-289 27-148 (231)
429 PLN02583 cinnamoyl-CoA reducta 95.2 0.19 4E-06 46.1 10.4 79 188-270 5-87 (297)
430 cd01079 NAD_bind_m-THF_DH NAD 95.2 0.22 4.8E-06 42.1 9.7 114 167-293 31-158 (197)
431 PLN03139 formate dehydrogenase 95.2 0.095 2.1E-06 49.6 8.4 88 188-291 198-291 (386)
432 PRK07574 formate dehydrogenase 95.2 0.11 2.5E-06 49.1 9.0 88 188-291 191-284 (385)
433 PLN03075 nicotianamine synthas 95.2 0.11 2.4E-06 47.1 8.4 106 177-291 113-233 (296)
434 PLN00016 RNA-binding protein; 95.2 0.17 3.6E-06 48.2 10.2 99 189-293 52-166 (378)
435 PRK00258 aroE shikimate 5-dehy 95.2 0.23 5.1E-06 45.0 10.6 93 187-291 121-221 (278)
436 PRK12748 3-ketoacyl-(acyl-carr 95.2 0.17 3.6E-06 45.1 9.6 35 188-222 4-40 (256)
437 PRK07069 short chain dehydroge 95.2 0.074 1.6E-06 47.1 7.3 31 192-222 2-32 (251)
438 PRK14190 bifunctional 5,10-met 95.2 0.26 5.7E-06 44.4 10.6 97 167-293 136-232 (284)
439 TIGR01830 3oxo_ACP_reduc 3-oxo 95.1 0.098 2.1E-06 45.8 8.0 80 192-271 1-86 (239)
440 PRK14172 bifunctional 5,10-met 95.1 0.2 4.3E-06 45.0 9.7 96 168-293 137-232 (278)
441 PRK14177 bifunctional 5,10-met 95.1 0.2 4.2E-06 45.2 9.6 97 167-293 137-233 (284)
442 KOG1252 Cystathionine beta-syn 95.1 0.11 2.3E-06 47.4 7.8 60 183-243 97-156 (362)
443 TIGR02356 adenyl_thiF thiazole 95.1 0.19 4.1E-06 43.3 9.2 33 189-222 21-53 (202)
444 PLN02476 O-methyltransferase 95.1 0.18 3.9E-06 45.4 9.3 105 180-290 110-227 (278)
445 PRK14967 putative methyltransf 95.0 0.34 7.4E-06 42.3 11.0 95 184-291 32-159 (223)
446 PRK14180 bifunctional 5,10-met 95.0 0.21 4.6E-06 44.9 9.7 97 167-293 136-232 (282)
447 PRK13243 glyoxylate reductase; 95.0 0.12 2.6E-06 48.2 8.4 33 188-221 149-181 (333)
448 PRK07402 precorrin-6B methylas 95.0 0.32 6.9E-06 41.5 10.5 101 180-291 32-142 (196)
449 KOG4169 15-hydroxyprostaglandi 95.0 0.1 2.2E-06 45.0 7.0 106 189-295 5-140 (261)
450 TIGR03840 TMPT_Se_Te thiopurin 95.0 0.22 4.7E-06 43.2 9.4 99 187-292 33-153 (213)
451 PRK14169 bifunctional 5,10-met 94.9 0.24 5.2E-06 44.6 9.8 97 167-293 134-230 (282)
452 TIGR00715 precor6x_red precorr 94.9 0.08 1.7E-06 47.2 6.7 74 191-271 2-75 (256)
453 PRK06300 enoyl-(acyl carrier p 94.9 0.32 7E-06 44.6 10.9 33 188-220 7-41 (299)
454 PRK05562 precorrin-2 dehydroge 94.9 0.83 1.8E-05 39.8 12.7 116 188-316 24-141 (223)
455 TIGR00438 rrmJ cell division p 94.9 0.15 3.3E-06 43.3 8.2 98 183-291 27-146 (188)
456 PRK14178 bifunctional 5,10-met 94.9 0.34 7.4E-06 43.6 10.6 97 167-293 130-226 (279)
457 PRK14179 bifunctional 5,10-met 94.9 0.26 5.7E-06 44.5 9.8 95 168-293 137-232 (284)
458 PRK06550 fabG 3-ketoacyl-(acyl 94.9 0.14 3.1E-06 44.8 8.2 35 188-222 4-38 (235)
459 COG0569 TrkA K+ transport syst 94.8 0.26 5.6E-06 43.2 9.6 85 191-282 2-87 (225)
460 cd05313 NAD_bind_2_Glu_DH NAD( 94.8 0.68 1.5E-05 41.1 12.2 34 187-221 36-69 (254)
461 PRK07577 short chain dehydroge 94.8 0.13 2.7E-06 45.1 7.8 73 188-271 2-78 (234)
462 COG2226 UbiE Methylase involve 94.8 0.21 4.5E-06 43.9 8.8 104 181-294 44-159 (238)
463 PLN02244 tocopherol O-methyltr 94.8 0.085 1.8E-06 49.4 6.9 96 187-291 117-223 (340)
464 PF01113 DapB_N: Dihydrodipico 94.8 0.04 8.7E-07 43.3 4.0 97 191-293 2-99 (124)
465 COG0686 Ald Alanine dehydrogen 94.8 0.2 4.4E-06 45.2 8.7 95 190-295 169-272 (371)
466 COG2227 UbiG 2-polyprenyl-3-me 94.8 0.24 5.1E-06 43.1 8.9 92 187-290 58-160 (243)
467 PRK12859 3-ketoacyl-(acyl-carr 94.8 0.18 3.8E-06 45.0 8.7 33 188-220 5-39 (256)
468 PRK12549 shikimate 5-dehydroge 94.7 0.22 4.9E-06 45.2 9.3 93 187-291 125-227 (284)
469 PRK12475 thiamine/molybdopteri 94.7 0.2 4.3E-06 46.8 9.0 84 189-276 24-131 (338)
470 PRK14183 bifunctional 5,10-met 94.7 0.31 6.7E-06 43.9 9.8 97 167-293 135-231 (281)
471 PRK14170 bifunctional 5,10-met 94.7 0.27 5.9E-06 44.3 9.5 96 168-293 136-231 (284)
472 PRK12809 putative oxidoreducta 94.7 0.12 2.7E-06 52.7 8.3 81 188-272 309-406 (639)
473 COG1028 FabG Dehydrogenases wi 94.7 0.22 4.7E-06 44.1 9.0 35 188-222 4-38 (251)
474 PRK14173 bifunctional 5,10-met 94.7 0.27 5.9E-06 44.4 9.4 95 168-293 134-229 (287)
475 PRK14187 bifunctional 5,10-met 94.7 0.29 6.4E-06 44.3 9.6 97 167-293 138-234 (294)
476 PRK08317 hypothetical protein; 94.6 0.15 3.4E-06 44.6 7.9 99 181-291 12-124 (241)
477 TIGR01214 rmlD dTDP-4-dehydror 94.6 0.11 2.3E-06 47.2 7.0 60 191-271 1-60 (287)
478 PRK13581 D-3-phosphoglycerate 94.6 1 2.2E-05 44.8 14.3 86 188-291 139-230 (526)
479 COG2910 Putative NADH-flavin r 94.6 0.15 3.3E-06 42.4 6.8 94 191-294 2-107 (211)
480 PRK12550 shikimate 5-dehydroge 94.6 0.37 8E-06 43.5 10.1 98 175-291 109-216 (272)
481 PRK05690 molybdopterin biosynt 94.5 0.31 6.7E-06 43.3 9.5 34 189-223 32-65 (245)
482 PLN02589 caffeoyl-CoA O-methyl 94.5 0.34 7.4E-06 43.0 9.6 103 181-289 72-188 (247)
483 PRK15409 bifunctional glyoxyla 94.5 0.18 3.8E-06 46.8 8.1 33 188-221 144-177 (323)
484 PRK14166 bifunctional 5,10-met 94.5 0.35 7.6E-06 43.6 9.7 97 167-293 135-231 (282)
485 PF05724 TPMT: Thiopurine S-me 94.5 0.1 2.3E-06 45.4 6.2 101 184-291 33-155 (218)
486 PRK07502 cyclohexadienyl dehyd 94.5 0.33 7.1E-06 44.7 9.9 89 190-292 7-101 (307)
487 COG0169 AroE Shikimate 5-dehyd 94.5 0.2 4.4E-06 45.3 8.2 103 175-291 110-226 (283)
488 PRK15469 ghrA bifunctional gly 94.5 0.37 8E-06 44.5 10.2 86 188-291 135-226 (312)
489 PLN02695 GDP-D-mannose-3',5'-e 94.5 0.16 3.4E-06 48.3 7.9 77 186-270 18-94 (370)
490 TIGR01532 E4PD_g-proteo D-eryt 94.4 0.32 7E-06 45.0 9.6 100 191-294 1-123 (325)
491 TIGR01327 PGDH D-3-phosphoglyc 94.4 0.97 2.1E-05 45.0 13.7 87 188-291 137-229 (525)
492 PRK14186 bifunctional 5,10-met 94.4 0.36 7.7E-06 43.9 9.6 96 168-293 137-232 (297)
493 cd05311 NAD_bind_2_malic_enz N 94.4 1.1 2.4E-05 39.2 12.6 94 187-291 23-128 (226)
494 PRK14184 bifunctional 5,10-met 94.4 0.5 1.1E-05 42.7 10.5 97 167-293 135-235 (286)
495 TIGR01831 fabG_rel 3-oxoacyl-( 94.4 0.23 4.9E-06 43.6 8.4 77 192-271 1-86 (239)
496 PRK08644 thiamine biosynthesis 94.3 0.31 6.7E-06 42.2 8.9 33 190-223 29-61 (212)
497 COG1087 GalE UDP-glucose 4-epi 94.3 0.27 5.9E-06 44.2 8.5 77 191-272 2-78 (329)
498 PLN02897 tetrahydrofolate dehy 94.3 0.34 7.3E-06 44.8 9.3 97 167-293 192-288 (345)
499 PRK07688 thiamine/molybdopteri 94.3 0.29 6.3E-06 45.7 9.1 82 190-275 25-130 (339)
500 PRK10084 dTDP-glucose 4,6 dehy 94.3 0.26 5.6E-06 46.2 9.0 79 191-271 2-83 (352)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=4.5e-58 Score=412.24 Aligned_cols=307 Identities=28% Similarity=0.365 Sum_probs=279.2
Q ss_pred CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (378)
Q Consensus 45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v 124 (378)
+.+||++.+.+++++ +++.+++.|+|+++||+|+|+|+|+|++|++.+.|.++.. .+|++||||.+|+|+++|++|
T Consensus 1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~~vG~~V 76 (339)
T COG1064 1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVVEVGEGV 76 (339)
T ss_pred CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEEEecCCC
Confidence 467999999999998 7899999999999999999999999999999999999887 499999999999999999999
Q ss_pred CCCCCCCEEee-CCCC--------------------------CcccccceeccCCceEEcCCCCCHhhhhhccccHHHHH
Q 017064 125 TRLAPGDWVIP-SPPS--------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 177 (378)
Q Consensus 125 ~~~~~Gd~V~~-~~~~--------------------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~ 177 (378)
++|++||||.. +... +|+|+||+++|+.+++++|+++++++||.+.|++.|.|
T Consensus 77 ~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y 156 (339)
T COG1064 77 TGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY 156 (339)
T ss_pred ccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence 99999999987 3311 89999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHh
Q 017064 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLL 256 (378)
Q Consensus 178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~ 256 (378)
++|++ .+++||++|+|.|+ |++|++|+|+|+++|++|+++. .+++|++.++++|++++++..+.+ .+.+++
T Consensus 157 ~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~----~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~-- 228 (339)
T COG1064 157 RALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAIT----RSEEKLELAKKLGADHVINSSDSDALEAVKE-- 228 (339)
T ss_pred eehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEe----CChHHHHHHHHhCCcEEEEcCCchhhHHhHh--
Confidence 99988 99999999999999 7999999999999999999999 589999999999999999977433 344444
Q ss_pred cCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCC-CCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHH
Q 017064 257 ANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 335 (378)
Q Consensus 257 ~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (378)
.+|++||+++...+..+++.|+++|+++++|... ....+++...++.+++++.|+..++. .++++
T Consensus 229 ----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~----------~d~~e 294 (339)
T COG1064 229 ----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR----------ADLEE 294 (339)
T ss_pred ----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH----------HHHHH
Confidence 2999999999777899999999999999999663 34455777888999999999987643 77899
Q ss_pred HHHHHHcCCccccc-eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 336 LLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 336 ~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++|..+|++++.+ +.++++|+++|++.|++++..| ++||++
T Consensus 295 ~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~g-R~Vi~~ 337 (339)
T COG1064 295 ALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRG-RAVIDM 337 (339)
T ss_pred HHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeee-EEEecC
Confidence 99999999999999 6999999999999999999999 999874
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4.3e-54 Score=396.19 Aligned_cols=320 Identities=30% Similarity=0.404 Sum_probs=284.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++.+...+.+.. +++.+.|.|.|+++||+|||+++|+|+.|.....|..+...++|+++|.|++|+|+++|++|++|
T Consensus 1 mka~~~~~~g~~~~-l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 1 MKAVVVEEFGGPEV-LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred CeEEEEeccCCCce-eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence 68999999999877 99999999999999999999999999999999999744434689999999999999999999999
Q ss_pred CCCCEEeeCC-C-CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064 128 APGDWVIPSP-P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205 (378)
Q Consensus 128 ~~Gd~V~~~~-~-~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a 205 (378)
++||||+... . .+|+|+||+.+|++.++++|+++|+++||+++++++|||+++.+..++++|++|||+||+|++|.++
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~a 159 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAA 159 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Confidence 9999999984 2 2599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG 284 (378)
Q Consensus 206 v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~ 284 (378)
+|+||++|+++++++ +++++.++++++|+|+++++.+. +.+++++++++++ +|+|+|++|++.+..++.+|+++
T Consensus 160 iQlAk~~G~~~v~~~----~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~g-vDvv~D~vG~~~~~~~l~~l~~~ 234 (326)
T COG0604 160 IQLAKALGATVVAVV----SSSEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALAPG 234 (326)
T ss_pred HHHHHHcCCcEEEEe----cCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCC-ceEEEECCCHHHHHHHHHHhccC
Confidence 999999998888877 47777779999999999998887 5678999999877 99999999999999999999999
Q ss_pred CEEEEEecCC-CCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHH
Q 017064 285 GTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALS 362 (378)
Q Consensus 285 G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~~a~~ 362 (378)
|+++.+|..+ .....++...++.+.+...+.+.... .++...+.++++.+++++|.+++.++ +|||+|..++..
T Consensus 235 G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a 310 (326)
T COG0604 235 GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR----DPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAA 310 (326)
T ss_pred CEEEEEecCCCCCccccCHHHHhhccEEEEEecceec----chHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHH
Confidence 9999999877 44555666777778888888876432 23667788999999999999999976 899999666665
Q ss_pred HHHcc-CCCCCceEeeC
Q 017064 363 KALGL-HGSQPKQVIKF 378 (378)
Q Consensus 363 ~~~~~-~~~g~kvvv~~ 378 (378)
+...+ +..| |+|+++
T Consensus 311 ~~~~~~~~~G-Kvvl~~ 326 (326)
T COG0604 311 HLLLERRTTG-KVVLKV 326 (326)
T ss_pred HHHcccCCcc-eEEEeC
Confidence 55555 8889 999975
No 3
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-52 Score=360.98 Aligned_cols=315 Identities=24% Similarity=0.263 Sum_probs=278.4
Q ss_pred ccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec
Q 017064 42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG 121 (378)
Q Consensus 42 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 121 (378)
...|.+.++|.+..+++..+ .++.+++.|+++++||+|+++++|+|++|++.+.|.++. .++|+++|||.+|+|+++|
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~-p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvG 81 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLS-PEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVG 81 (360)
T ss_pred ccCchhhEEEEEECCCCCCC-cceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEEC
Confidence 34678889999999998655 788999999999999999999999999999999999998 5899999999999999999
Q ss_pred CCCCCCCCCCEEeeCCC---C-------------------------------CcccccceeccCCceEEcCCCCCHhhhh
Q 017064 122 SAVTRLAPGDWVIPSPP---S-------------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAA 167 (378)
Q Consensus 122 ~~v~~~~~Gd~V~~~~~---~-------------------------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa 167 (378)
++|++|++||||..-.- + +|+|++|+++++.++++||++++.+.||
T Consensus 82 s~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aA 161 (360)
T KOG0023|consen 82 SNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAA 161 (360)
T ss_pred CCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhcc
Confidence 99999999999864210 0 6779999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC-c
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-Q 246 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~-~ 246 (378)
.+.|++.|+|.+|.. .++.||++|.|.|+ |++|.+++|+||++|.+|+++.+. +.+|.+.++.||||..++.. +
T Consensus 162 PlLCaGITvYspLk~-~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~---~~kkeea~~~LGAd~fv~~~~d 236 (360)
T KOG0023|consen 162 PLLCAGITVYSPLKR-SGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTS---SKKKEEAIKSLGADVFVDSTED 236 (360)
T ss_pred chhhcceEEeehhHH-cCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCC---chhHHHHHHhcCcceeEEecCC
Confidence 999999999999987 88999999999999 669999999999999999999852 44677778889999999877 3
Q ss_pred c-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhcccc
Q 017064 247 L-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEK 325 (378)
Q Consensus 247 ~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (378)
. ..+.+.+.+++ .+|-|.+. ....+..++.+++++|++|++|.... +..++..++..+.+++.|+..++.
T Consensus 237 ~d~~~~~~~~~dg--~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~----- 307 (360)
T KOG0023|consen 237 PDIMKAIMKTTDG--GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSR----- 307 (360)
T ss_pred HHHHHHHHHhhcC--cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccH-----
Confidence 3 34667666665 46766665 45667899999999999999996654 788899999999999999988753
Q ss_pred HHHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 326 ATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 326 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.+.++++++..++.++.+++..+++++++||++|++++..+ |.||++
T Consensus 308 -----ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~kgdV~y-RfVvD~ 354 (360)
T KOG0023|consen 308 -----KETQEALDFVARGLIKSPIELVKLSEVNEAYERMEKGDVRY-RFVVDV 354 (360)
T ss_pred -----HHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHHhcCeeE-EEEEEc
Confidence 66889999999999999999999999999999999999998 999875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-51 Score=357.15 Aligned_cols=311 Identities=23% Similarity=0.277 Sum_probs=271.2
Q ss_pred CcccceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCC--CCCccCCCceeEEEEEec
Q 017064 45 SPPSKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVG 121 (378)
Q Consensus 45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG 121 (378)
..+|+++++.++++ +++++.|.|++ .|+||+|++.++|||++|++.+.......+ +.|+++|||.+|+|.++|
T Consensus 2 ~~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG 77 (354)
T KOG0024|consen 2 AADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG 77 (354)
T ss_pred CcccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence 34689999999998 89999999977 999999999999999999999987665543 579999999999999999
Q ss_pred CCCCCCCCCCEEeeCCCC---------------------------CcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064 122 SAVTRLAPGDWVIPSPPS---------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174 (378)
Q Consensus 122 ~~v~~~~~Gd~V~~~~~~---------------------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ 174 (378)
++|+++++||||+.-+.. +|++++|++.++++++|+|+++|++++|++. +++
T Consensus 78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs 156 (354)
T KOG0024|consen 78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS 156 (354)
T ss_pred ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence 999999999999876532 7999999999999999999999999999998 588
Q ss_pred HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HH---
Q 017064 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VK--- 250 (378)
Q Consensus 175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~--- 250 (378)
.+||+.+. +++++|++|||+|+ |++|+++...||++||..+++++. .++|++.++++|++.+.+..... .+
T Consensus 157 V~~HAcr~-~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~---~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~ 231 (354)
T KOG0024|consen 157 VGVHACRR-AGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDL---VANRLELAKKFGATVTDPSSHKSSPQELA 231 (354)
T ss_pred hhhhhhhh-cCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeec---CHHHHHHHHHhCCeEEeeccccccHHHHH
Confidence 89999986 99999999999999 999999999999999977777764 89999999999999998766533 33
Q ss_pred -HHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHH
Q 017064 251 -NVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE 328 (378)
Q Consensus 251 -~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (378)
.+++..+... +|++|||+|.. .++.++..++.+|+++++| ......++++.+...+++++.|++.+
T Consensus 232 ~~v~~~~g~~~-~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry---------- 299 (354)
T KOG0024|consen 232 ELVEKALGKKQ-PDVTFDCSGAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRY---------- 299 (354)
T ss_pred HHHHhhccccC-CCeEEEccCchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeee----------
Confidence 3444444433 99999999975 4688999999999988888 44556788999999999999999864
Q ss_pred HHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 329 CRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 329 ~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.+..+..+++++++|++++. ++.|+++++.+||+.+.+++..+.|+++.
T Consensus 300 ~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 300 CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence 22578899999999999865 67899999999999999999877799986
No 5
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.9e-51 Score=341.29 Aligned_cols=324 Identities=24% Similarity=0.290 Sum_probs=291.7
Q ss_pred CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064 44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~ 123 (378)
.|+..|.+++...|+++. +++++.|.|+|+++|.+||-.|+|+|..|..+..|.+. .++.|++||.|.+|+|+.+|++
T Consensus 5 ~p~~~k~i~v~e~Ggydv-lk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~g 82 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDV-LKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEG 82 (336)
T ss_pred CCchheEEEEeccCCcce-EEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCC
Confidence 455568899999998865 99999999999999999999999999999999999985 3478999999999999999999
Q ss_pred CCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064 124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (378)
Q Consensus 124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~ 203 (378)
|+++++||||+...+ .|.|+++..+|...++++|+.+++++||++.+.++|||.-+++..++++|++||||.|+|++|+
T Consensus 83 vtdrkvGDrVayl~~-~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGl 161 (336)
T KOG1197|consen 83 VTDRKVGDRVAYLNP-FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGL 161 (336)
T ss_pred ccccccccEEEEecc-chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHH
Confidence 999999999998875 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282 (378)
Q Consensus 204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~ 282 (378)
++.|++++.|+++|+++ ++.+|++.+++.|+.|.|+++.++ +.++.++++++| +|+++|++|.+.+..++.+|+
T Consensus 162 ll~Ql~ra~~a~tI~~a----sTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~dt~~~sl~~Lk 236 (336)
T KOG1197|consen 162 LLCQLLRAVGAHTIATA----STAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKDTFAKSLAALK 236 (336)
T ss_pred HHHHHHHhcCcEEEEEe----ccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccchhhHHHHHHhc
Confidence 99999999999999999 789999999999999999999876 588999999988 999999999999999999999
Q ss_pred cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHH
Q 017064 283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTAL 361 (378)
Q Consensus 283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~~a~ 361 (378)
+.|.+|.+|..++....+++..+..+.+.+....+..++ ..+..+.....+++.++.+|.+++.++ +|||+++.+|+
T Consensus 237 ~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi--~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~ 314 (336)
T KOG1197|consen 237 PMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYI--DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH 314 (336)
T ss_pred cCceEEEeccccCCCCCeehhhcChhhhhhccHhhhccc--CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence 999999999888766666766666677766554433332 234556667888999999999999875 79999999999
Q ss_pred HHHHccCCCCCceEeeC
Q 017064 362 SKALGLHGSQPKQVIKF 378 (378)
Q Consensus 362 ~~~~~~~~~g~kvvv~~ 378 (378)
.++++.+..| |+++.+
T Consensus 315 ~diesrktvG-kvlLlp 330 (336)
T KOG1197|consen 315 ADIESRKTVG-KVLLLP 330 (336)
T ss_pred HHHHhhhccc-eEEEeC
Confidence 9999999999 999853
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.2e-49 Score=347.14 Aligned_cols=311 Identities=26% Similarity=0.350 Sum_probs=276.2
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
++++++...+++| ++++++++++|++|||+||+.++|+|++|....+|..|.. +|.++|||.+|+|++||++|++
T Consensus 2 k~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~ 76 (366)
T COG1062 2 KTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTS 76 (366)
T ss_pred CceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccc
Confidence 4688999999988 8999999999999999999999999999999999999884 9999999999999999999999
Q ss_pred CCCCCEEeeCCCC-----------------------------------------------CcccccceeccCCceEEcCC
Q 017064 127 LAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKVSK 159 (378)
Q Consensus 127 ~~~Gd~V~~~~~~-----------------------------------------------~G~~~~~~~~~~~~~~~iP~ 159 (378)
++|||+|+..+.- .++|++|.++++..++|+++
T Consensus 77 vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~ 156 (366)
T COG1062 77 VKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDP 156 (366)
T ss_pred cCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCC
Confidence 9999999876641 35999999999999999999
Q ss_pred CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc
Q 017064 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD 239 (378)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~ 239 (378)
..+++.++.+.|...|.+.+..+.+++++|++|.|.|. |++|++++|-|+..|+..|+.+| .+++|+++++++|++
T Consensus 157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD---~~~~Kl~~A~~fGAT 232 (366)
T COG1062 157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD---INPEKLELAKKFGAT 232 (366)
T ss_pred CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe---CCHHHHHHHHhcCCc
Confidence 99999999999999999999999899999999999999 99999999999999997777776 489999999999999
Q ss_pred EEEccCcc-c-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEE
Q 017064 240 EVFTESQL-E-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGF 315 (378)
Q Consensus 240 ~vi~~~~~-~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 315 (378)
+++|..+. + ++.+..++++ ++|.+|||+|+ ..+++++.+..++|+.+.+|.... ...++++..++.. .++.|+
T Consensus 233 ~~vn~~~~~~vv~~i~~~T~g--G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs 309 (366)
T COG1062 233 HFVNPKEVDDVVEAIVELTDG--GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGS 309 (366)
T ss_pred eeecchhhhhHHHHHHHhcCC--CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEE
Confidence 99999876 3 4668888887 49999999998 556899999999999999995533 3455677777766 899999
Q ss_pred echhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.++.. ..+.++.+++++..+|++... ++.++|+||||||++|.+++.. |-||++
T Consensus 310 ~~G~~-------~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I--R~Vi~~ 366 (366)
T COG1062 310 AFGGA-------RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI--RSVIRF 366 (366)
T ss_pred eecCC-------ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee--eEEecC
Confidence 88754 123668889999999999975 5789999999999999999887 777764
No 7
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.8e-48 Score=331.40 Aligned_cols=336 Identities=53% Similarity=0.849 Sum_probs=302.6
Q ss_pred cccCCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEe
Q 017064 41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120 (378)
Q Consensus 41 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~v 120 (378)
...++...|++++...++|.+++++.+.++|++...+|+||..|+.|||+|+..++|.||..+++|.+-|.|++|.|+.+
T Consensus 13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~v 92 (354)
T KOG0025|consen 13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAV 92 (354)
T ss_pred ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEe
Confidence 33466677999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCch
Q 017064 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 200 (378)
Q Consensus 121 G~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~ 200 (378)
|+++.+|++||+|+......|+|++|.+.+++.++++++.+++++||++..+++|||..|.+.-++++||+|+-.||.++
T Consensus 93 Gs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~ 172 (354)
T KOG0025|consen 93 GSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSG 172 (354)
T ss_pred cCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccH
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHh
Q 017064 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280 (378)
Q Consensus 201 ~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~ 280 (378)
+|++.+|+||++|++-|.++|+.+..++-.+.++++||++++...+..-...++.....+++.+.+||+|+.......+.
T Consensus 173 VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~ 252 (354)
T KOG0025|consen 173 VGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARY 252 (354)
T ss_pred HHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHH
Confidence 99999999999999999999998888888899999999999855443223344433333458999999999999999999
Q ss_pred cccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccc-cHHHHHHHHHHHHHHHHcCCccccc-eeeccccHH
Q 017064 281 LSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSE-KATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQ 358 (378)
Q Consensus 281 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~ 358 (378)
|..||+++.+|+++..+..++...+++|++++.|+++..|.... .++...+++.++.+|++.|+++.+. ...+|++..
T Consensus 253 L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~ 332 (354)
T KOG0025|consen 253 LERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHK 332 (354)
T ss_pred HhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhh
Confidence 99999999999999999999999999999999999999996543 3778889999999999999999885 579999999
Q ss_pred HHHHHHHccCCC-CCceEee
Q 017064 359 TALSKALGLHGS-QPKQVIK 377 (378)
Q Consensus 359 ~a~~~~~~~~~~-g~kvvv~ 377 (378)
.|++........ | |.+|.
T Consensus 333 tald~~L~~~~~~~-Kq~i~ 351 (354)
T KOG0025|consen 333 TALDAALSKFGKSG-KQIIV 351 (354)
T ss_pred HHHHHHHHHhccCC-ceEEE
Confidence 999877665554 4 65554
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=8.3e-47 Score=357.58 Aligned_cols=312 Identities=23% Similarity=0.316 Sum_probs=266.6
Q ss_pred cceEEEcccCCC-----ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecC
Q 017064 48 SKAVVYEREGPP-----DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS 122 (378)
Q Consensus 48 ~~a~~~~~~~~~-----~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~ 122 (378)
||++++..++.+ .+.+++++.|.|.++++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 789999987753 234899999999999999999999999999999999887543 4689999999999999999
Q ss_pred CCCCCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceE
Q 017064 123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH 155 (378)
Q Consensus 123 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~ 155 (378)
+++++++||+|++.+. ..|+|+||+.+++++++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999986321 02689999999999999
Q ss_pred EcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH
Q 017064 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK 234 (378)
Q Consensus 156 ~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~ 234 (378)
++|+++++++|++++++++|||+++...+++++|++|||.|+ |++|++++|+||++|+ +|+++. .+++|++.++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~----~~~~r~~~a~ 233 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD----LNEDKLALAR 233 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHH
Confidence 999999999999999999999999877788999999999996 9999999999999999 577766 5788999999
Q ss_pred hCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCce
Q 017064 235 GLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLS 311 (378)
Q Consensus 235 ~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 311 (378)
++|+++++++.+.+ .+.+++++++ + +|++|||+|. ..+..++++++++|+++.+|.... ...+++...++.++++
T Consensus 234 ~~Ga~~~i~~~~~~~~~~i~~~~~~-g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 311 (371)
T cd08281 234 ELGATATVNAGDPNAVEQVRELTGG-G-VDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT 311 (371)
T ss_pred HcCCceEeCCCchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCE
Confidence 99999999987654 4667777776 4 9999999997 467889999999999999996543 2345666778889999
Q ss_pred EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+.|++...+. ..+.++++++++++|++++. +++|+|+|+++||+.+.+++..+ |+|+
T Consensus 312 i~g~~~~~~~-------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~-~vi~ 371 (371)
T cd08281 312 LKGSYMGSCV-------PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVR-QVIL 371 (371)
T ss_pred EEEEecCCCC-------hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcee-eeeC
Confidence 9998765441 12457788999999999863 56899999999999999998887 7664
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.9e-46 Score=350.04 Aligned_cols=306 Identities=22% Similarity=0.260 Sum_probs=260.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.+++. +++++++.|.++++||+|||.++|+|++|++.+.+.+......|.++|||++|+|+++|++|+++
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (339)
T cd08239 1 MRGAVFPGDRT----VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHF 76 (339)
T ss_pred CeEEEEecCCc----eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccC
Confidence 68999987654 89999999999999999999999999999998877643222357899999999999999999999
Q ss_pred CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
++||+|++.+. ..|+|++|++++.++++++|+++++++|+++++++.|||+++
T Consensus 77 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l 156 (339)
T cd08239 77 RVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL 156 (339)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999987541 148899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~ 259 (378)
.. ..+.+|++|||+|+ |++|++++|+|+++|++ |+++. .++++.++++++|+++++++++.+.+.+.+.+++.
T Consensus 157 ~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 230 (339)
T cd08239 157 RR-VGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVD----PSPERLELAKALGADFVINSGQDDVQEIRELTSGA 230 (339)
T ss_pred Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCC
Confidence 65 78899999999987 99999999999999999 87766 47888999999999999988765555677777765
Q ss_pred CCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHHHH
Q 017064 260 PEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL 337 (378)
Q Consensus 260 g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (378)
+ +|++|||+|+... ..++++++++|+++.+|..... .++. ..++.+++++.|+...+ .+.+++++
T Consensus 231 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~ 297 (339)
T cd08239 231 G-ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS----------VPDMEECA 297 (339)
T ss_pred C-CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC----------HHHHHHHH
Confidence 5 9999999998765 7889999999999999965432 2332 45677999999986532 14578889
Q ss_pred HHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 338 CLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 338 ~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++++|.+++. +++|+|+|+++|++++.+++ .| |+||+|
T Consensus 298 ~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~g-Kvvi~~ 339 (339)
T cd08239 298 EFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SG-KVVFVF 339 (339)
T ss_pred HHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ce-EEEEeC
Confidence 99999998753 56899999999999998875 67 999986
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.1e-46 Score=350.65 Aligned_cols=311 Identities=21% Similarity=0.268 Sum_probs=264.8
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
|||++++..++.+ +++++.|.|.++++||+|||.++|+|++|++.+.|..+. .+|.++|||++|+|+++|+++++
T Consensus 1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~ 75 (358)
T TIGR03451 1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTD 75 (358)
T ss_pred CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcc
Confidence 6899999998876 788999999999999999999999999999998886542 46899999999999999999999
Q ss_pred CCCCCEEeeCCC---------------------------------------CCcccccceeccCCceEEcCCCCCHhhhh
Q 017064 127 LAPGDWVIPSPP---------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA 167 (378)
Q Consensus 127 ~~~Gd~V~~~~~---------------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa 167 (378)
|++||+|++.+. ..|+|+||+.+++++++++|+++++++|+
T Consensus 76 ~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa 155 (358)
T TIGR03451 76 VAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG 155 (358)
T ss_pred cCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhh
Confidence 999999986221 14889999999999999999999999999
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
++++++.++|+++...+.+++|++|||+|+ |++|++++|+||++|++ |+++. .++++.++++++|+++++++.+
T Consensus 156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~----~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVD----IDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCceEEcCCC
Confidence 999999999999887788999999999986 99999999999999996 76665 4788999999999999998876
Q ss_pred cc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceEEEEechhhhcc
Q 017064 247 LE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSS 323 (378)
Q Consensus 247 ~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (378)
.+ .+.+++.+++.+ +|++|||+|+ ..+..++++++++|+++.+|..... ..++++..++.+++++.+++.....
T Consensus 231 ~~~~~~i~~~~~~~g-~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 307 (358)
T TIGR03451 231 TDPVEAIRALTGGFG-ADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL-- 307 (358)
T ss_pred cCHHHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC--
Confidence 54 466778887666 9999999997 4678899999999999999965432 3456666778899999987543211
Q ss_pred ccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 324 EKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
..+.++++++++++|++++. .++|||+|+++|++.+++++.. |++|.
T Consensus 308 -----~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~--k~~~~ 357 (358)
T TIGR03451 308 -----PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL--RSVVE 357 (358)
T ss_pred -----cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc--eeEEe
Confidence 13557889999999999863 5689999999999999988764 77765
No 11
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=6.4e-46 Score=352.49 Aligned_cols=315 Identities=21% Similarity=0.290 Sum_probs=263.3
Q ss_pred CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064 44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~ 123 (378)
.|.+||++++..++++ +.+++++.|.++++||+|||.++|+|++|++.+.|..+....+|.++|||++|+|+++|++
T Consensus 7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 4567999999987754 6788999999999999999999999999999998876433357899999999999999999
Q ss_pred CCCCCCCCEEeeCCC--------------------------------------------------CCcccccceeccCCc
Q 017064 124 VTRLAPGDWVIPSPP--------------------------------------------------SSGTWQSYVVKDQSV 153 (378)
Q Consensus 124 v~~~~~Gd~V~~~~~--------------------------------------------------~~G~~~~~~~~~~~~ 153 (378)
+++|++||||++.+. ..|+|+||++++.++
T Consensus 84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~ 163 (381)
T PLN02740 84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC 163 (381)
T ss_pred CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence 999999999987531 148999999999999
Q ss_pred eEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHH
Q 017064 154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK 232 (378)
Q Consensus 154 ~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~ 232 (378)
++++|+++++++++.+++++.|||+++...+++++|++|||+|+ |++|++++|+||++|+ +|+++. .++++.+.
T Consensus 164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~----~~~~r~~~ 238 (381)
T PLN02740 164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVD----INPEKFEK 238 (381)
T ss_pred eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEc----CChHHHHH
Confidence 99999999999999999999999999877789999999999997 9999999999999999 577776 47889999
Q ss_pred HHhCCCcEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCCC-Cccccchhhh
Q 017064 233 LKGLGADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSKK-PITVSTSAFI 306 (378)
Q Consensus 233 ~~~~ga~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~ 306 (378)
++++|++++++..+. ..+.+++++++ + +|++||++|+ ..+..++.+++++ |+++.+|..... ...++...+
T Consensus 239 a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g-~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~- 315 (381)
T PLN02740 239 GKEMGITDFINPKDSDKPVHERIREMTGG-G-VDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL- 315 (381)
T ss_pred HHHcCCcEEEecccccchHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-
Confidence 999999999987653 34567777776 5 9999999997 4678999999997 999999965432 122333333
Q ss_pred hcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.+++++.|+....+. ....++++++++.+|.+++. +++|+|+|+++|++.+.+++. . |++|+.
T Consensus 316 ~~~~~i~g~~~~~~~-------~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~-k~~~~~ 381 (381)
T PLN02740 316 FDGRSITGSVFGDFK-------GKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-L-RCLLHL 381 (381)
T ss_pred hcCCeEEEEecCCCC-------cHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-e-eEEEeC
Confidence 378899988765431 12457889999999998763 568999999999999988765 3 999863
No 12
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=7.4e-46 Score=349.12 Aligned_cols=310 Identities=19% Similarity=0.277 Sum_probs=256.9
Q ss_pred CCcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064 44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 44 ~~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~ 123 (378)
.|.++.++......+. ++..+++.|.++++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~ 84 (360)
T PLN02586 9 HPQKAFGWAARDPSGV---LSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKN 84 (360)
T ss_pred chhheeEEEecCCCCC---ceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCC
Confidence 4555666666554442 778888999999999999999999999999998876542 256899999999999999999
Q ss_pred CCCCCCCCEEeeCCC----------------------------------CCcccccceeccCCceEEcCCCCCHhhhhhc
Q 017064 124 VTRLAPGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169 (378)
Q Consensus 124 v~~~~~Gd~V~~~~~----------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~ 169 (378)
|++|++||+|+..+. .+|+|+||++++++.++++|+++++++++++
T Consensus 85 v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l 164 (360)
T PLN02586 85 VKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPL 164 (360)
T ss_pred CCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhh
Confidence 999999999974210 1489999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH
Q 017064 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV 249 (378)
Q Consensus 170 ~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~ 249 (378)
++++.|+|+++.....+++|++|||.|+ |++|++++|+||++|++|++++.. .+++.+.++++|++++++..+.
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~---~~~~~~~~~~~Ga~~vi~~~~~-- 238 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSS---SNKEDEAINRLGADSFLVSTDP-- 238 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC---cchhhhHHHhCCCcEEEcCCCH--
Confidence 9999999999977667789999999887 999999999999999998887632 3344556688999999986653
Q ss_pred HHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHH
Q 017064 250 KNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATE 328 (378)
Q Consensus 250 ~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (378)
+.+++.++ ++|++||++|.. .++.++++++++|+++.+|... .+..++...++.++..+.++..++
T Consensus 239 ~~~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~--------- 305 (360)
T PLN02586 239 EKMKAAIG---TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIGG--------- 305 (360)
T ss_pred HHHHhhcC---CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcCC---------
Confidence 34555543 399999999974 5788999999999999998543 345566677777888888876432
Q ss_pred HHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 329 CRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 329 ~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.+.++++++++++|++++.+++|+|+|+++||+.+.+++..| |+|+++
T Consensus 306 -~~~~~~~~~li~~g~i~~~~~~~~l~~~~~A~~~~~~~~~~g-kvvi~~ 353 (360)
T PLN02586 306 -IKETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRY-RFVIDV 353 (360)
T ss_pred -HHHHHHHHHHHHhCCCCCcEEEEeHHHHHHHHHHHHcCCCcE-EEEEEc
Confidence 145788999999999998778899999999999999999888 999874
No 13
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2e-45 Score=342.27 Aligned_cols=317 Identities=30% Similarity=0.452 Sum_probs=266.1
Q ss_pred cceEEEcccCCCc--cceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
||++++..++++. +.+++.+.|.|.++++||+||+.++|+|++|+..+.|.++....+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 6899998887652 22788899999999999999999999999999999887654445789999999999999999999
Q ss_pred C-CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe-CCCchHHH
Q 017064 126 R-LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQ 203 (378)
Q Consensus 126 ~-~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~-g~~g~~G~ 203 (378)
+ |++||+|++....+|+|++|+++++++++++|+++++++++++++.++|||..+ ....+ ++++++|+ |++|++|+
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~ 158 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR 158 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence 6 999999998754348999999999999999999999999999999999997554 44555 55666666 78899999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282 (378)
Q Consensus 204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~ 282 (378)
+++|+|+++|+++++++ .++++.+.++++|++++++++..+ .+.+++.+++.+ +|++||++|+......+++++
T Consensus 159 ~a~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~-~d~vid~~g~~~~~~~~~~l~ 233 (324)
T cd08291 159 MLVRLCKADGIKVINIV----RRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLN-ATIFFDAVGGGLTGQILLAMP 233 (324)
T ss_pred HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCC-CcEEEECCCcHHHHHHHHhhC
Confidence 99999999999998887 578899999999999999887654 467888887766 999999999988888999999
Q ss_pred cCCEEEEEecCCCCCc-cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHH
Q 017064 283 QGGTMVTYGGMSKKPI-TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTA 360 (378)
Q Consensus 283 ~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a 360 (378)
++|+++.+|.....+. .++...++.+++++.+++...+... ...+.+++++++++ +.+++.+ ++|+|+|+++|
T Consensus 234 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a 308 (324)
T cd08291 234 YGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQK----LGPEVVKKLKKLVK-TELKTTFASRYPLALTLEA 308 (324)
T ss_pred CCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcc----cCHHHHHHHHHHHh-CccccceeeEEcHHHHHHH
Confidence 9999999996544433 2555667789999999987655221 12456778888888 8888765 58999999999
Q ss_pred HHHHHccCCCCCceEee
Q 017064 361 LSKALGLHGSQPKQVIK 377 (378)
Q Consensus 361 ~~~~~~~~~~g~kvvv~ 377 (378)
++.+.+++..| |++|+
T Consensus 309 ~~~~~~~~~~G-kvv~~ 324 (324)
T cd08291 309 IAFYSKNMSTG-KKLLI 324 (324)
T ss_pred HHHHHhCCCCC-eEEeC
Confidence 99999999999 99974
No 14
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=4.3e-45 Score=344.98 Aligned_cols=307 Identities=21% Similarity=0.312 Sum_probs=254.1
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
+++.+...+.+.. +...+++.|.++++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 6 ~a~~~~~~~~~~~-l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~ 83 (375)
T PLN02178 6 KAFGWAANDESGV-LSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFK 83 (375)
T ss_pred eeEEEEEccCCCC-ceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccC
Confidence 3433333333322 777888889999999999999999999999999887532 24688999999999999999999999
Q ss_pred CCCEEeeCCC----------------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064 129 PGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174 (378)
Q Consensus 129 ~Gd~V~~~~~----------------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ 174 (378)
+||+|+..+. ..|+|+||+.++++.++++|++++++++++++++..
T Consensus 84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 163 (375)
T PLN02178 84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163 (375)
T ss_pred CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence 9999974210 148999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064 175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 253 (378)
Q Consensus 175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~ 253 (378)
|+|+++..... .++|++|+|.|+ |++|++++|+||++|++|+++++. .+++.+.++++|+++++++.+. +.+.
T Consensus 164 ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~---~~~~~~~a~~lGa~~~i~~~~~--~~v~ 237 (375)
T PLN02178 164 TVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS---SEKEREAIDRLGADSFLVTTDS--QKMK 237 (375)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC---hHHhHHHHHhCCCcEEEcCcCH--HHHH
Confidence 99999876433 368999999987 999999999999999998888732 3445778889999999986642 3555
Q ss_pred HHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHH
Q 017064 254 GLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM 332 (378)
Q Consensus 254 ~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (378)
+.++ + +|++|||+|.+ .+..++++++++|+++.+|... .+..++...++.+++++.|+.... .+.
T Consensus 238 ~~~~--~-~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~----------~~~ 303 (375)
T PLN02178 238 EAVG--T-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG----------MKE 303 (375)
T ss_pred HhhC--C-CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC----------HHH
Confidence 5553 3 99999999986 5689999999999999999643 345567777888999999986542 145
Q ss_pred HHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 333 IDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 333 ~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++++++++|++++.+++|||+|+++|++.+.+++..| |+|+++
T Consensus 304 ~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~g-kvvi~~ 348 (375)
T PLN02178 304 TQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRY-RFVIDV 348 (375)
T ss_pred HHHHHHHHHhCCCcccEEEEeHHHHHHHHHHHHcCCCce-EEEEEe
Confidence 788999999999998888899999999999999999888 999874
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.8e-45 Score=345.07 Aligned_cols=310 Identities=22% Similarity=0.272 Sum_probs=259.8
Q ss_pred cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064 46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
.+||++++.++++. ++++++|.|.++++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|++++
T Consensus 11 ~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~ 83 (378)
T PLN02827 11 ITCRAAVAWGAGEA---LVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVT 83 (378)
T ss_pred ceeEEEEEecCCCC---ceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCc
Confidence 45899999876643 7889999999999999999999999999999887642 3578999999999999999999
Q ss_pred CCCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcC
Q 017064 126 RLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVS 158 (378)
Q Consensus 126 ~~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP 158 (378)
+|++||+|++.+. ..|+|+||+.++++.++++|
T Consensus 84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP 163 (378)
T PLN02827 84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD 163 (378)
T ss_pred ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence 9999999997532 12799999999999999999
Q ss_pred CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC
Q 017064 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA 238 (378)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga 238 (378)
+++++++++.+++++.++|+++.+.+++++|++|||+|+ |++|++++|+|+++|++++++++ .++++.++++++|+
T Consensus 164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~---~~~~~~~~a~~lGa 239 (378)
T PLN02827 164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD---INPEKAEKAKTFGV 239 (378)
T ss_pred CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC---CCHHHHHHHHHcCC
Confidence 999999999999888899988877788999999999997 99999999999999996444442 37889999999999
Q ss_pred cEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCCCCccccc-hhhhhcCceE
Q 017064 239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSKKPITVST-SAFIFKDLSL 312 (378)
Q Consensus 239 ~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~ 312 (378)
++++++++. ..+.+++++++ + +|++||++|.+ .+..+++.++++ |+++.+|.... ...+.. ..++.+++++
T Consensus 240 ~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-~~~~~~~~~~~~~~~~i 316 (378)
T PLN02827 240 TDFINPNDLSEPIQQVIKRMTGG-G-ADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-KPEVSAHYGLFLSGRTL 316 (378)
T ss_pred cEEEcccccchHHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-CccccccHHHHhcCceE
Confidence 999987652 33557777766 4 99999999985 578999999998 99999996543 233333 3567799999
Q ss_pred EEEechhhhccccHHHHHHHHHHHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.|+....+. ....++++++++++|++++ . +++|+|+|+++|++.+.+++. + |+||.+
T Consensus 317 ~g~~~~~~~-------~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~-k~vi~~ 376 (378)
T PLN02827 317 KGSLFGGWK-------PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-L-RCVIHM 376 (378)
T ss_pred EeeecCCCc-------hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-e-EEEEEe
Confidence 998765431 1245778899999999997 3 568999999999999998876 5 999875
No 16
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2.5e-44 Score=334.84 Aligned_cols=322 Identities=30% Similarity=0.518 Sum_probs=277.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.+++++.+++++.++|.|.+.++||+|||.++++|++|+..+.|.++..+..|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 68999988776544488999999999999999999999999999999888765433468899999999999999999999
Q ss_pred CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (378)
Q Consensus 128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~ 207 (378)
++||+|++... .|+|++|++++.+.++++|+++++++++++++.+++||+++.. +++.+|++|||+|++|.+|++++|
T Consensus 81 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~ 158 (324)
T cd08292 81 QVGQRVAVAPV-HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAM 158 (324)
T ss_pred CCCCEEEeccC-CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHH
Confidence 99999999863 4899999999999999999999999999999999999999855 899999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT 286 (378)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~ 286 (378)
+|+++|+++++++ .++++.+.++++|+++++++++.+ ...+++.+++++ +|++|||+|+.....++++++++|+
T Consensus 159 ~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~d~~g~~~~~~~~~~l~~~g~ 233 (324)
T cd08292 159 LAAARGINVINLV----RRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAP-ISVALDSVGGKLAGELLSLLGEGGT 233 (324)
T ss_pred HHHHCCCeEEEEe----cCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHhhcCCcE
Confidence 9999999999998 467777888889999999887653 466888888877 9999999999888999999999999
Q ss_pred EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHH
Q 017064 287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKAL 365 (378)
Q Consensus 287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~ 365 (378)
++.+|.......++++...+.+++++.++....+.....+....+.++++++++.+|.+++. .+.|+++++++|++.+.
T Consensus 234 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~ 313 (324)
T cd08292 234 LVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASM 313 (324)
T ss_pred EEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHH
Confidence 99998653333445555567799999999876653333255567789999999999999854 56899999999999999
Q ss_pred ccCCCCCceEee
Q 017064 366 GLHGSQPKQVIK 377 (378)
Q Consensus 366 ~~~~~g~kvvv~ 377 (378)
++...+ |+|++
T Consensus 314 ~~~~~~-kvvv~ 324 (324)
T cd08292 314 RPGRAG-KVLLR 324 (324)
T ss_pred cCCCCc-eEEeC
Confidence 888888 99874
No 17
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=6.7e-45 Score=341.07 Aligned_cols=303 Identities=19% Similarity=0.198 Sum_probs=250.3
Q ss_pred cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhc-ccCCC-CCCCCccCCCceeEEEEEecCC
Q 017064 46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~ 123 (378)
..++++++..++. +++++.+.| ++++||+|||.++|||++|++.+. |..+. ..++|.++|||++|+|+++ +
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~ 75 (343)
T PRK09880 3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--D 75 (343)
T ss_pred ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--c
Confidence 3568999987776 889999987 689999999999999999999875 43322 1257899999999999999 7
Q ss_pred CCCCCCCCEEeeCC-------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhcccc
Q 017064 124 VTRLAPGDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN 172 (378)
Q Consensus 124 v~~~~~Gd~V~~~~-------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~ 172 (378)
+++|++||+|+..+ ...|+|+||++++++.++++|+++++++++. ..+
T Consensus 76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~ 154 (343)
T PRK09880 76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEP 154 (343)
T ss_pred CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcH
Confidence 88999999998532 1258999999999999999999999987664 346
Q ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHH
Q 017064 173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN 251 (378)
Q Consensus 173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~ 251 (378)
+.+||+++.+ ....+|++|+|+|+ |++|++++|+|+++|++ |+++. .+++++++++++|+++++++++.+..+
T Consensus 155 ~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~ 228 (343)
T PRK09880 155 LAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCAD----VSPRSLSLAREMGADKLVNPQNDDLDH 228 (343)
T ss_pred HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEe----CCHHHHHHHHHcCCcEEecCCcccHHH
Confidence 7899999976 56678999999997 99999999999999995 66665 478999999999999999987765544
Q ss_pred HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064 252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 330 (378)
Q Consensus 252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (378)
+.+.. +++|++|||+|.+ .++.++++++++|+++.+|... ...++++..++.+++++.++... .
T Consensus 229 ~~~~~---g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~-----------~ 293 (343)
T PRK09880 229 YKAEK---GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF-----------T 293 (343)
T ss_pred HhccC---CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec-----------c
Confidence 33322 2499999999985 5689999999999999999543 33456777788899999987531 2
Q ss_pred HHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 331 NMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 331 ~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+.++++++++++|++++. +++|+|+|+++|++.+.+++..| |+++++
T Consensus 294 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~ 343 (343)
T PRK09880 294 EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAA-KVQLVF 343 (343)
T ss_pred ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCce-EEEEeC
Confidence 457889999999999863 46899999999999999888888 999975
No 18
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2e-44 Score=340.66 Aligned_cols=310 Identities=21% Similarity=0.294 Sum_probs=255.6
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++.+..++.. ++++++|.|.++++||+|||.++|+|++|++.+.|.++. .++|.++|||++|+|+++|+++++|
T Consensus 2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~ 77 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSV 77 (368)
T ss_pred ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccC
Confidence 788888877654 788999999999999999999999999999999887653 2578999999999999999999999
Q ss_pred CCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCCC
Q 017064 128 APGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD 160 (378)
Q Consensus 128 ~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~~ 160 (378)
++||||++.+. ..|+|+||+++|.++++++|++
T Consensus 78 ~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~ 157 (368)
T TIGR02818 78 KVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPA 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCC
Confidence 99999987531 0268999999999999999999
Q ss_pred CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc
Q 017064 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD 239 (378)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~ 239 (378)
+++++++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++. .++++++.++++|++
T Consensus 158 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~----~~~~~~~~a~~~Ga~ 232 (368)
T TIGR02818 158 APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID----INPAKFELAKKLGAT 232 (368)
T ss_pred CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCC
Confidence 9999999999999999999987789999999999987 9999999999999999 677776 478899999999999
Q ss_pred EEEccCc--c-cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcCceEE
Q 017064 240 EVFTESQ--L-EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSLK 313 (378)
Q Consensus 240 ~vi~~~~--~-~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~ 313 (378)
++++..+ . ..+.+++++++ + +|++|||+|++ .+..++++++++ |+++.+|.... .+..+....++ ++..+.
T Consensus 233 ~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~ 309 (368)
T TIGR02818 233 DCVNPNDYDKPIQEVIVEITDG-G-VDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWR 309 (368)
T ss_pred eEEcccccchhHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEE
Confidence 9998764 2 23557777776 4 99999999974 568899999886 99999996532 22333344443 344566
Q ss_pred EEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 314 GFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++....+ .....++++++++++|++++. +++|+|+|+++|++.+.+++. . |++|++
T Consensus 310 g~~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~-k~~v~~ 368 (368)
T TIGR02818 310 GSAFGGV-------KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-I-RTVIHY 368 (368)
T ss_pred EeeccCC-------CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-e-eEEeeC
Confidence 6643321 012457889999999998753 578999999999999987754 4 999875
No 19
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.4e-44 Score=334.90 Aligned_cols=298 Identities=18% Similarity=0.182 Sum_probs=250.6
Q ss_pred EEEcccCCCc-cceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCC
Q 017064 51 VVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAP 129 (378)
Q Consensus 51 ~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 129 (378)
+.+..++.+. ..+++++.|.|.++++||+|||.++|+|++|.+.+.|.++.. ..|.++|||++|+|+++|+++++|++
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccCC
Confidence 4455555542 348899999999999999999999999999999998876532 34789999999999999999999999
Q ss_pred CCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH
Q 017064 130 GDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED 182 (378)
Q Consensus 130 Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~ 182 (378)
||+|+..+ ..+|+|+||+.++++.++++|+++++++++.+++++.|||+++..
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~ 160 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR 160 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence 99997421 014899999999999999999999999999999999999999965
Q ss_pred HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
+++++|++|||+|+ |++|++++|+|+++|++|++++ .+++|+++++++|++++++..+.. .. ++
T Consensus 161 -~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~----~~~~~~~~a~~~Ga~~vi~~~~~~---------~~-~~ 224 (329)
T TIGR02822 161 -ASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMT----RGAAARRLALALGAASAGGAYDTP---------PE-PL 224 (329)
T ss_pred -cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHhCCceeccccccC---------cc-cc
Confidence 88999999999998 9999999999999999988887 478899999999999998754321 11 38
Q ss_pred cEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHH
Q 017064 263 ALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 341 (378)
Q Consensus 263 Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (378)
|+++++.+. ..+..++++++++|+++.+|........++...++.+++++.++.... ...+.+++++++
T Consensus 225 d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~l~~ 294 (329)
T TIGR02822 225 DAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT----------RADAREFLELAA 294 (329)
T ss_pred eEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC----------HHHHHHHHHHHH
Confidence 999988875 456889999999999999996433333455666777899998875421 234677889999
Q ss_pred cCCccccceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 342 EGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 342 ~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+|++++.+++|+|+|+++|++.+.+++..| |+||
T Consensus 295 ~g~i~~i~~~~~l~~~~~A~~~~~~~~~~G-kvvl 328 (329)
T TIGR02822 295 QHGVRVTTHTYPLSEADRALRDLKAGRFDG-AAVL 328 (329)
T ss_pred hCCCeeEEEEEeHHHHHHHHHHHHcCCCce-EEEe
Confidence 999987778899999999999999999999 9987
No 20
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=4.5e-44 Score=338.85 Aligned_cols=309 Identities=21% Similarity=0.302 Sum_probs=259.2
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
+||++++..++.+ +++++++.|+++++||+|||.++|+|++|++.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus 2 ~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~ 77 (369)
T cd08301 2 TCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTD 77 (369)
T ss_pred ccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCc
Confidence 6899999887664 788999999999999999999999999999999887652 357899999999999999999999
Q ss_pred CCCCCEEeeCCC------------------------------------------------CCcccccceeccCCceEEcC
Q 017064 127 LAPGDWVIPSPP------------------------------------------------SSGTWQSYVVKDQSVWHKVS 158 (378)
Q Consensus 127 ~~~Gd~V~~~~~------------------------------------------------~~G~~~~~~~~~~~~~~~iP 158 (378)
|++||+|++.+. ..|+|+||+++++.+++++|
T Consensus 78 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 157 (369)
T cd08301 78 LKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKIN 157 (369)
T ss_pred cccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECC
Confidence 999999987521 12789999999999999999
Q ss_pred CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCC
Q 017064 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLG 237 (378)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g 237 (378)
+++++++++++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++. .++++.+.++++|
T Consensus 158 ~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~----~~~~~~~~~~~~G 232 (369)
T cd08301 158 PEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVD----LNPSKFEQAKKFG 232 (369)
T ss_pred CCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcC
Confidence 999999999999999999999888789999999999987 9999999999999999 688777 4788999999999
Q ss_pred CcEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcCce
Q 017064 238 ADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLS 311 (378)
Q Consensus 238 a~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 311 (378)
++.+++..+. ..+.+++++++ + +|++|||+|.. ....++++++++ |+++.+|.... ...+++...++ ++++
T Consensus 233 a~~~i~~~~~~~~~~~~v~~~~~~-~-~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~ 309 (369)
T cd08301 233 VTEFVNPKDHDKPVQEVIAEMTGG-G-VDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRT 309 (369)
T ss_pred CceEEcccccchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCe
Confidence 9999987652 23456677765 4 99999999975 468899999996 99999996543 23334433344 7899
Q ss_pred EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+.|+....+. ....++++++++.+|.+++. +++|+|+|+++|++.+.+++. . |++|
T Consensus 310 i~g~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-k~~~ 368 (369)
T cd08301 310 LKGTLFGGYK-------PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-L-RCIL 368 (369)
T ss_pred EEEEecCCCC-------hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-e-eEEe
Confidence 9998765441 22457889999999988763 568999999999999998875 3 8887
No 21
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=5.5e-44 Score=337.92 Aligned_cols=310 Identities=24% Similarity=0.343 Sum_probs=256.2
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
+||++++...+.+ +++++.|.|.++++||+|||.++|+|++|.+.+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus 2 ~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~ 77 (368)
T cd08300 2 TCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTS 77 (368)
T ss_pred cceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCcc
Confidence 5788888777654 7889999999999999999999999999999998876542 57899999999999999999999
Q ss_pred CCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCC
Q 017064 127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK 159 (378)
Q Consensus 127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~ 159 (378)
|++||+|++.+. ..|+|+||+.++++.++++|+
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 157 (368)
T cd08300 78 VKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINP 157 (368)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCC
Confidence 999999987521 126899999999999999999
Q ss_pred CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCC
Q 017064 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA 238 (378)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga 238 (378)
++++++++++++++.|||+++...+.+++|++|||+|+ |++|++++|+|+++|+ +|+++. .++++.+.++++|+
T Consensus 158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~----~~~~~~~~~~~lGa 232 (368)
T cd08300 158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID----INPDKFELAKKFGA 232 (368)
T ss_pred CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCC
Confidence 99999999999999999999877788999999999986 9999999999999999 577776 47889999999999
Q ss_pred cEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCC-CCccccchhhhhcCceE
Q 017064 239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSL 312 (378)
Q Consensus 239 ~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~ 312 (378)
++++++++. ..+.+++++++ + +|+||||+|+ ..+..++++++++ |+++.+|.... .+..++...+. ++..+
T Consensus 233 ~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~ 309 (368)
T cd08300 233 TDCVNPKDHDKPIQQVLVEMTDG-G-VDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVW 309 (368)
T ss_pred CEEEcccccchHHHHHHHHHhCC-C-CcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeE
Confidence 999988753 34567777776 4 9999999997 4678899999886 99999996532 22333333333 34566
Q ss_pred EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.++....|. ..+.++++++++++|++++. +++|+|+|+++|++.+.+++. . |++|+
T Consensus 310 ~g~~~~~~~-------~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~-k~~~~ 368 (368)
T cd08300 310 KGTAFGGWK-------SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-I-RTVVK 368 (368)
T ss_pred EEEEecccC-------cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-c-eeeeC
Confidence 666554331 13457788999999999863 478999999999999987764 4 99875
No 22
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.8e-44 Score=334.96 Aligned_cols=307 Identities=22% Similarity=0.278 Sum_probs=259.1
Q ss_pred cccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064 46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 46 ~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
..++++++..++++ ++.++++.|.++++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 8 ~~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 8 KKTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred ceEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCcc
Confidence 34799999998875 788999999999999999999999999999998886543 24688999999999999999999
Q ss_pred CCCCCCEEeeCC----------------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccc
Q 017064 126 RLAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIV 171 (378)
Q Consensus 126 ~~~~Gd~V~~~~----------------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~ 171 (378)
+|++||+|+..+ ...|+|+||++++.+.++++|+++++++++++++
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 999999997421 0148999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHH
Q 017064 172 NPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVK 250 (378)
Q Consensus 172 ~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~ 250 (378)
++.|||+++......++|++|+|+|+ |++|++++|+||++|++++++++ +++++. .++++|+++++++.+. .
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~----~~~~~~~~~~~~Ga~~~i~~~~~--~ 236 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISS----SDKKREEALEHLGADDYLVSSDA--A 236 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHhcCCcEEecCCCh--H
Confidence 99999999987666789999999976 99999999999999999888873 455554 4467999988876542 3
Q ss_pred HHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064 251 NVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC 329 (378)
Q Consensus 251 ~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (378)
.+.+.+. ++|++|||+|. ..+..++++++++|+++.+|.... ..+++...++.+++++.|+.....
T Consensus 237 ~~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~--------- 303 (357)
T PLN02514 237 EMQEAAD---SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSM--------- 303 (357)
T ss_pred HHHHhcC---CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCH---------
Confidence 4555443 39999999996 467889999999999999996543 345666778889999999865422
Q ss_pred HHHHHHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 330 RNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 330 ~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
..++++++++.+|.+++.+++|+|+|+.+|++.+++++..| |+|+++
T Consensus 304 -~~~~~~~~~~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~g-k~v~~~ 350 (357)
T PLN02514 304 -KETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRY-RFVVDV 350 (357)
T ss_pred -HHHHHHHHHHHhCCCcCcEEEEcHHHHHHHHHHHHcCCCce-eEEEEc
Confidence 45788999999999988788899999999999999999888 999874
No 23
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-44 Score=311.41 Aligned_cols=314 Identities=23% Similarity=0.291 Sum_probs=272.3
Q ss_pred CcccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (378)
Q Consensus 45 ~~~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v 124 (378)
+.++|+++...++.| +.++|+..++|+..||+||+.++++|++|...+.|..+.. .+|.++|||.+|+|+++|.+|
T Consensus 5 vI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~-~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 5 VITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG-LFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred ceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc-cCceEecccceeEEEEecCCc
Confidence 457899999999998 8899999999999999999999999999999999987543 689999999999999999999
Q ss_pred CCCCCCCEEeeCCCC------------------------------------------------CcccccceeccCCceEE
Q 017064 125 TRLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVWHK 156 (378)
Q Consensus 125 ~~~~~Gd~V~~~~~~------------------------------------------------~G~~~~~~~~~~~~~~~ 156 (378)
+++++||+|+..... ..+|+||.+++...++|
T Consensus 81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 999999999965531 34899999999999999
Q ss_pred cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC
Q 017064 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL 236 (378)
Q Consensus 157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ 236 (378)
|++..+++.++.+.+...|.|.+..+.++++||+++.|+|. |++|+++++-||+.||..|+-+| -+++|.+.++++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvD---iN~~Kf~~ak~f 236 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVD---INPDKFEKAKEF 236 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEe---cCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999 99999999999999996565555 489999999999
Q ss_pred CCcEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCC-CCCccccchhhhhcCc
Q 017064 237 GADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMS-KKPITVSTSAFIFKDL 310 (378)
Q Consensus 237 ga~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~ 310 (378)
|+++.+|+.+. -.+.+.++|++ ++|.-|||+|+ +.+++++.+...| |+-|.+|... ....++.++.++ .+.
T Consensus 237 GaTe~iNp~d~~~~i~evi~EmTdg--GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR 313 (375)
T KOG0022|consen 237 GATEFINPKDLKKPIQEVIIEMTDG--GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGR 313 (375)
T ss_pred CcceecChhhccccHHHHHHHHhcC--CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-ccc
Confidence 99999998843 23568888886 69999999998 5568999999998 9999999553 334566666665 588
Q ss_pred eEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 311 SLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++.|+.++.| ..+..+..+.+...++.++.. ++++||+++++||++|.+++.. |.|+.+
T Consensus 314 ~~~Gs~FGG~-------K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi--R~vl~~ 375 (375)
T KOG0022|consen 314 TWKGSAFGGF-------KSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI--RCVLWM 375 (375)
T ss_pred EEEEEecccc-------cchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE--EEEEeC
Confidence 8999988876 233556777777888888864 6899999999999999998876 777754
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.9e-43 Score=332.68 Aligned_cols=309 Identities=25% Similarity=0.344 Sum_probs=257.6
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
+||++++...+++ ++++++|.|.++++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+++++
T Consensus 2 ~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08277 2 KCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTN 76 (365)
T ss_pred ccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCcc
Confidence 5789988877654 78899999999999999999999999999999988655 357899999999999999999999
Q ss_pred CCCCCEEeeCCC----------------------------------------------CCcccccceeccCCceEEcCCC
Q 017064 127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD 160 (378)
Q Consensus 127 ~~~Gd~V~~~~~----------------------------------------------~~G~~~~~~~~~~~~~~~iP~~ 160 (378)
+++||+|++.+. ..|+|+||++++.+.++++|++
T Consensus 77 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~ 156 (365)
T cd08277 77 LKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPA 156 (365)
T ss_pred CCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCC
Confidence 999999987521 1378999999999999999999
Q ss_pred CCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc
Q 017064 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD 239 (378)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~ 239 (378)
+++++++++++++.|||+++...+++++|++|||+|+ |++|++++|+|+++|+ +|+++. .++++.+.++++|++
T Consensus 157 l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~~~~~ga~ 231 (365)
T cd08277 157 APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD----INEDKFEKAKEFGAT 231 (365)
T ss_pred CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCC
Confidence 9999999999999999999877789999999999986 9999999999999999 577776 478899999999999
Q ss_pred EEEccCccc---HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccC-CEEEEEecCCCCCccccchhhhhcCceEEE
Q 017064 240 EVFTESQLE---VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQG-GTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314 (378)
Q Consensus 240 ~vi~~~~~~---~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 314 (378)
++++..+.. .+.++++++ .+ +|++|||+|. ..+..++++++++ |+++.+|.......++++..++. ++++.|
T Consensus 232 ~~i~~~~~~~~~~~~~~~~~~-~g-~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g 308 (365)
T cd08277 232 DFINPKDSDKPVSEVIREMTG-GG-VDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKG 308 (365)
T ss_pred cEeccccccchHHHHHHHHhC-CC-CCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEe
Confidence 999876532 455777766 34 9999999996 4558899999885 99999996543334455555553 888988
Q ss_pred EechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 315 FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
++.+.+. ....++++++++.++.++.. +++|+|+|+++|++.+.+++ .. |+++.
T Consensus 309 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-k~~i~ 365 (365)
T cd08277 309 SFFGGFK-------SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CI-RTVIT 365 (365)
T ss_pred eecCCCC-------hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-Cc-eEeeC
Confidence 8765441 12356788899999987643 56899999999999998877 44 98873
No 25
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9e-43 Score=326.67 Aligned_cols=313 Identities=21% Similarity=0.269 Sum_probs=253.2
Q ss_pred cceEEEcccC----CCccceEEeee---CCC-CCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCC--ceeEEE
Q 017064 48 SKAVVYEREG----PPDSVIKMIEL---PPV-EVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY--EGVGEV 117 (378)
Q Consensus 48 ~~a~~~~~~~----~~~~~~~~~~~---~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V 117 (378)
+|+|++...- .++. |++.+. +.| ++++|||+|||.++++|+.|+..+.+..+ ....|+++|+ |++|+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~-f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v 86 (348)
T PLN03154 9 NKQVILKNYIDGIPKETD-MEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVS 86 (348)
T ss_pred ceEEEEecCCCCCCCccc-EEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEE
Confidence 4666663321 1223 777773 555 45899999999999999999875443222 1235889998 889999
Q ss_pred EEecCCCCCCCCCCEEeeCCCCCcccccceeccCC--ceEE--cCCCCCHh-hhhhccccHHHHHHHHHHHhccCCCCEE
Q 017064 118 YSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQS--VWHK--VSKDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSI 192 (378)
Q Consensus 118 ~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~--~~~~--iP~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~V 192 (378)
..+|+++++|++||+|++. |+|+||++++.+ ++++ +|++++++ ++++++++++|||+++.+.+++++|++|
T Consensus 87 ~~vg~~v~~~~~Gd~V~~~----~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V 162 (348)
T PLN03154 87 KVVDSDDPNFKPGDLISGI----TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV 162 (348)
T ss_pred EEEecCCCCCCCCCEEEec----CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence 9999999999999999865 689999999875 3544 49999986 7889999999999999888899999999
Q ss_pred EEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcc-c-HHHHHHHhcCCCCCcEEEeCC
Q 017064 193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL-E-VKNVKGLLANLPEPALGFNCV 269 (378)
Q Consensus 193 lV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~-~-~~~i~~~~~~~g~~Dvvid~~ 269 (378)
||+|++|++|++++|+||++|++|++++ .++++.+.++ ++|+++++++++. + .+.+++.+++ | +|++|||+
T Consensus 163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~----~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~-g-vD~v~d~v 236 (348)
T PLN03154 163 FVSAASGAVGQLVGQLAKLHGCYVVGSA----GSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE-G-IDIYFDNV 236 (348)
T ss_pred EEecCccHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC-C-cEEEEECC
Confidence 9999999999999999999999998887 5788888887 7999999998742 3 3556666653 4 99999999
Q ss_pred CCccHHHHHHhcccCCEEEEEecCCCCCcc-----ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCC
Q 017064 270 GGNSASKVLKFLSQGGTMVTYGGMSKKPIT-----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK 344 (378)
Q Consensus 270 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 344 (378)
|+..+..++++++++|+++.+|.....+.. .+...++.+++++.|+....+ .....+.++++++++++|+
T Consensus 237 G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~-----~~~~~~~~~~~~~l~~~G~ 311 (348)
T PLN03154 237 GGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDY-----LHLFPQFLENVSRYYKQGK 311 (348)
T ss_pred CHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHH-----HHHHHHHHHHHHHHHHCCC
Confidence 998889999999999999999965433221 244567789999999876543 1223467889999999999
Q ss_pred ccccce-eeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 345 LKYDME-LVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 345 ~~~~~~-~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++.++ .|+|+++++|++.+++++..| |+||++
T Consensus 312 l~~~~~~~~~L~~~~~A~~~l~~g~~~G-KvVl~~ 345 (348)
T PLN03154 312 IVYIEDMSEGLESAPAALVGLFSGKNVG-KQVIRV 345 (348)
T ss_pred ccCceecccCHHHHHHHHHHHHcCCCCc-eEEEEe
Confidence 998765 799999999999999999999 999974
No 26
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2e-42 Score=324.38 Aligned_cols=328 Identities=51% Similarity=0.834 Sum_probs=276.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCC-CcEEEEEEeeccChhhhhhhcccCCCCCC----CCccCCCceeEEEEEecC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK----VPAVGGYEGVGEVYSVGS 122 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~ 122 (378)
||++++..++.+.+.+.+++.|.|++.+ ++|+||+.++|+|++|...+.|..+.... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 7999999888765448899999998887 99999999999999999998887653322 577899999999999999
Q ss_pred CCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHH
Q 017064 123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202 (378)
Q Consensus 123 ~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G 202 (378)
++..+++||+|++.....|+|++|++++.+.++++|+++++++++++++.++|||+++.....+++|++|||+|++|++|
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg 160 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG 160 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence 99999999999987644589999999999999999999999999999999999999998878899999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----cHHHHHHHhcCCCCCcEEEeCCCCccHHHHH
Q 017064 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGLLANLPEPALGFNCVGGNSASKVL 278 (378)
Q Consensus 203 ~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~ 278 (378)
++++|+|++.|++++++++.....+++.+.++++|++++++++.. ....+++..++ + +|++|||+|+..+...+
T Consensus 161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~-~d~vld~~g~~~~~~~~ 238 (341)
T cd08290 161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-R-PKLALNCVGGKSATELA 238 (341)
T ss_pred HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-C-ceEEEECcCcHhHHHHH
Confidence 999999999999999998542111267788889999999988763 34556777666 4 99999999998888899
Q ss_pred HhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceee---cc
Q 017064 279 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELV---PF 354 (378)
Q Consensus 279 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~---~l 354 (378)
++++++|+++.+|........++....+.+++++.+.....+....++......++++++++.+|.+++. ...| ++
T Consensus 239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (341)
T cd08290 239 RLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPL 318 (341)
T ss_pred HHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCH
Confidence 9999999999998544333445555667899999998876542212355666788999999999999875 3457 99
Q ss_pred ccHHHHHHHHHccCCCCCceEeeC
Q 017064 355 NNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 355 ~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++++++.+.+++..+ |+|+++
T Consensus 319 ~~~~~a~~~~~~~~~~~-k~v~~~ 341 (341)
T cd08290 319 EEFKDALANALKGGGGG-KQVLVM 341 (341)
T ss_pred HHHHHHHHHHhhcCCCC-eEEEeC
Confidence 99999999999999888 999875
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=8.3e-43 Score=327.64 Aligned_cols=310 Identities=24% Similarity=0.287 Sum_probs=252.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
||++++..++. +++.+.|.|.+ +++||+|||.++|+|++|...+..... ...|.++|||++|+|+++|+++++
T Consensus 1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 74 (347)
T PRK10309 1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDD 74 (347)
T ss_pred CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCC
Confidence 68999987664 88999999987 599999999999999999875432111 135789999999999999999999
Q ss_pred CCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 127 LAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 127 ~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
|++||+|++.+. ..|+|++|+.++++.++++|+++++++++.+. ...++|+++
T Consensus 75 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~ 153 (347)
T PRK10309 75 LHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF 153 (347)
T ss_pred CCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH
Confidence 999999997641 14899999999999999999999999999874 355678876
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcE-EEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS-INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~v-i~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~ 259 (378)
....+.+|++|||+|+ |++|++++|+|+++|+++ +++. .++++.+.++++|++++++.++.+.+++.+.+.+.
T Consensus 154 -~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 227 (347)
T PRK10309 154 -HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAID----INSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227 (347)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence 4478899999999986 999999999999999984 5554 47888999999999999988765556677777765
Q ss_pred CCCc-EEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCcccc---chhhhhcCceEEEEechhhhccccHHHHHHHHH
Q 017064 260 PEPA-LGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRNMID 334 (378)
Q Consensus 260 g~~D-vvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (378)
+ +| ++|||+|++ .+..++++++++|+++.+|.... +.+++ ...++.+++++.|++.... .. ...+.++
T Consensus 228 ~-~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~----~~~~~~~ 300 (347)
T PRK10309 228 R-FDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNYS-SP----WPGQEWE 300 (347)
T ss_pred C-CCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEecccc-CC----cchhHHH
Confidence 5 88 999999985 66899999999999999996543 22232 2356779999999865321 00 0124577
Q ss_pred HHHHHHHcCCccc--c-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 335 YLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 335 ~~~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++++++|.+++ . +++|+|+|+++|++.+.+++..| |+|+++
T Consensus 301 ~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvv~~ 346 (347)
T PRK10309 301 TASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPG-KVLLQI 346 (347)
T ss_pred HHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcce-EEEEeC
Confidence 8899999999864 2 56799999999999999998888 999875
No 28
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=6.1e-43 Score=331.88 Aligned_cols=308 Identities=16% Similarity=0.142 Sum_probs=242.6
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCC-------CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEE
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVK-------ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYS 119 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 119 (378)
-||++++..+++ ++++++|.|.++ +|||+|||.++|||++|++.+.|..+. .+|.++|||++|+|++
T Consensus 2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~ 75 (393)
T TIGR02819 2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIE 75 (393)
T ss_pred CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEE
Confidence 489999988775 888999998774 689999999999999999999886542 4689999999999999
Q ss_pred ecCCCCCCCCCCEEeeCCC------------------------------------CCcccccceeccCC--ceEEcCCCC
Q 017064 120 VGSAVTRLAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDS 161 (378)
Q Consensus 120 vG~~v~~~~~Gd~V~~~~~------------------------------------~~G~~~~~~~~~~~--~~~~iP~~~ 161 (378)
+|++|++|++||||++.+. .+|+|+||+.+|+. .++++|+++
T Consensus 76 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~ 155 (393)
T TIGR02819 76 KGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRD 155 (393)
T ss_pred EcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcc
Confidence 9999999999999976310 14899999999964 799999987
Q ss_pred CH----hhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC
Q 017064 162 PM----EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG 237 (378)
Q Consensus 162 ~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g 237 (378)
+. .+++++..++.++|+++.. .++++|++|||.|+ |++|++++|+|+++|++++++++ .+++|.++++++|
T Consensus 156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d---~~~~r~~~a~~~G 230 (393)
T TIGR02819 156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGD---LNPARLAQARSFG 230 (393)
T ss_pred cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHcC
Confidence 53 3466777788899999865 88999999999776 99999999999999999777654 3678999999999
Q ss_pred CcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCc---------------cHHHHHHhcccCCEEEEEecCC-CCCc--
Q 017064 238 ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLSQGGTMVTYGGMS-KKPI-- 298 (378)
Q Consensus 238 a~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-~~~~-- 298 (378)
++.+.+..+. ..+.+.+++++.+ +|++|||+|.+ .++.++++++++|+++.+|... ....
T Consensus 231 a~~v~~~~~~~~~~~v~~~~~~~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~ 309 (393)
T TIGR02819 231 CETVDLSKDATLPEQIEQILGEPE-VDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAV 309 (393)
T ss_pred CeEEecCCcccHHHHHHHHcCCCC-CcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccc
Confidence 9854433333 3356777777666 99999999985 5789999999999999999653 2111
Q ss_pred ---------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---c-eeeccccHHHHHHHHH
Q 017064 299 ---------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---M-ELVPFNNFQTALSKAL 365 (378)
Q Consensus 299 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~-~~~~l~~~~~a~~~~~ 365 (378)
++.....+.+++++.+.... ..+.+.++++++.+|++++. + ++|||+|+++||+.+.
T Consensus 310 ~~~~~~~~~~i~~~~~~~~~~~i~g~~~~----------~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~ 379 (393)
T TIGR02819 310 DAAAKTGSLSIRFGLGWAKSHSFHTGQTP----------VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFD 379 (393)
T ss_pred cccccccccccchHHhhccCceEEeccCC----------hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHh
Confidence 12223344455555553110 11334678999999998763 4 5799999999999998
Q ss_pred ccCCCCCceEeeC
Q 017064 366 GLHGSQPKQVIKF 378 (378)
Q Consensus 366 ~~~~~g~kvvv~~ 378 (378)
+++. + |++|++
T Consensus 380 ~~~~-~-Kvvi~~ 390 (393)
T TIGR02819 380 AGAA-K-KFVIDP 390 (393)
T ss_pred hCCc-e-EEEEeC
Confidence 7754 5 999874
No 29
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.1e-42 Score=326.73 Aligned_cols=305 Identities=21% Similarity=0.252 Sum_probs=254.0
Q ss_pred EEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCC
Q 017064 51 VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPG 130 (378)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 130 (378)
+++..++++ +++++.|.|.++++||+|||.++|+|++|++.+.+......++|.++|||++|+|+++|++++.+ +|
T Consensus 2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~G 77 (349)
T TIGR03201 2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IG 77 (349)
T ss_pred ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CC
Confidence 345556653 78889999999999999999999999999998754332223568999999999999999999887 99
Q ss_pred CEEeeCCC--------------------------CCcccccceeccCCceEEcCC------CCCHhhhhhccccHHHHHH
Q 017064 131 DWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSK------DSPMEYAATIIVNPLTALR 178 (378)
Q Consensus 131 d~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~------~~~~~~aa~~~~~~~ta~~ 178 (378)
|+|++.+. ..|+|+||++++.+.++++|+ ++++++++++++++.++|+
T Consensus 78 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~ 157 (349)
T TIGR03201 78 KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ 157 (349)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence 99986320 248999999999999999999 8999999999999999999
Q ss_pred HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----cHHHHHH
Q 017064 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKG 254 (378)
Q Consensus 179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----~~~~i~~ 254 (378)
++.. ..+++|++|+|+|+ |++|++++|+|+++|++|+++. .++++.++++++|++++++..+. ..+.+++
T Consensus 158 a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~ 231 (349)
T TIGR03201 158 AAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAID----IDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKA 231 (349)
T ss_pred HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHhCCceEecCccccHHHHHHHHHh
Confidence 9975 78999999999999 9999999999999999988876 47889999999999999987653 2355777
Q ss_pred HhcCCCCCc----EEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064 255 LLANLPEPA----LGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC 329 (378)
Q Consensus 255 ~~~~~g~~D----vvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (378)
+++++| +| ++|||+|+.. .+.++++++++|+++.+|.... ...++...++.++.++.|.+...
T Consensus 232 ~t~~~g-~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~---------- 299 (349)
T TIGR03201 232 FAKARG-LRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP---------- 299 (349)
T ss_pred hcccCC-CCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC----------
Confidence 777766 76 8999999865 5678999999999999996543 34455666777788888875321
Q ss_pred HHHHHHHHHHHHcCCcccc--ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 330 RNMIDYLLCLAREGKLKYD--MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 330 ~~~~~~~~~~l~~g~~~~~--~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
...++++++++++|++++. ++.|+|+|+++||+.+.+++..| |+++++
T Consensus 300 ~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~-k~~~~~ 349 (349)
T TIGR03201 300 PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKR-RAILTP 349 (349)
T ss_pred HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccc-eEEecC
Confidence 2457889999999999763 56799999999999999999888 999864
No 30
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.9e-42 Score=321.90 Aligned_cols=313 Identities=23% Similarity=0.262 Sum_probs=254.5
Q ss_pred cceEEEcccCCCccceEEeeeCC----CCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCce--eEEEEEec
Q 017064 48 SKAVVYEREGPPDSVIKMIELPP----VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEG--VGEVYSVG 121 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~----p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG 121 (378)
+|++....+. + +.+++.+.+. |+|+++||+|||+++++|+.|++...|..+.....|+++|+++ .|++..+|
T Consensus 8 ~~~~~~~~~~-~-~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~ 85 (338)
T cd08295 8 LKAYVTGFPK-E-SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD 85 (338)
T ss_pred EecCCCCCCC-c-cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence 3555543433 2 2388988877 7899999999999999999999988885432124578899754 45666688
Q ss_pred CCCCCCCCCCEEeeCCCCCcccccceeccC-CceEEcC-CCCCHh-hhhhccccHHHHHHHHHHHhccCCCCEEEEeCCC
Q 017064 122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVS-KDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 198 (378)
Q Consensus 122 ~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~-~~~~~iP-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~ 198 (378)
+++++|++||+|+++ |+|+||+++++ ..++++| +++++. ++++++++++|||+++.+.+++++|++|||+|++
T Consensus 86 ~~v~~~~vGd~V~~~----g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~ 161 (338)
T cd08295 86 SGNPDFKVGDLVWGF----TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS 161 (338)
T ss_pred cCCCCCCCCCEEEec----CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 999999999999975 68999999999 7999995 678887 7999999999999999888899999999999999
Q ss_pred chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCc--ccHHHHHHHhcCCCCCcEEEeCCCCccHH
Q 017064 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSAS 275 (378)
Q Consensus 199 g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~--~~~~~i~~~~~~~g~~Dvvid~~g~~~~~ 275 (378)
|++|++++|+|+++|++|++++ .++++.+++++ +|+++++++.+ ...+.+++.++ .| +|++||++|+..+.
T Consensus 162 G~vG~~aiqlAk~~G~~Vi~~~----~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~g-vd~v~d~~g~~~~~ 235 (338)
T cd08295 162 GAVGQLVGQLAKLKGCYVVGSA----GSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NG-IDIYFDNVGGKMLD 235 (338)
T ss_pred cHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CC-cEEEEECCCHHHHH
Confidence 9999999999999999999888 57889999988 99999998654 23355666654 34 99999999998889
Q ss_pred HHHHhcccCCEEEEEecCCCCCc-----cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-
Q 017064 276 KVLKFLSQGGTMVTYGGMSKKPI-----TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM- 349 (378)
Q Consensus 276 ~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~- 349 (378)
.++++++++|+++.+|....... ..+...++.+++++.++....+ +....+.++++++++.+|.+++..
T Consensus 236 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~l~~~g~l~~~~~ 310 (338)
T cd08295 236 AVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDY-----LHRYPEFLEEMSGYIKEGKLKYVED 310 (338)
T ss_pred HHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhh-----HHHHHHHHHHHHHHHHCCCeEceee
Confidence 99999999999999985443221 1233556678888888655432 223456788899999999999764
Q ss_pred eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 350 ELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 350 ~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
..|+++++++|++.+++++..| |+|+++
T Consensus 311 ~~~~l~~~~~A~~~~~~~~~~G-kvVl~~ 338 (338)
T cd08295 311 IADGLESAPEAFVGLFTGSNIG-KQVVKV 338 (338)
T ss_pred cccCHHHHHHHHHHHhcCCCCc-eEEEEC
Confidence 4699999999999999999999 999975
No 31
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2e-42 Score=319.27 Aligned_cols=293 Identities=17% Similarity=0.193 Sum_probs=235.7
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccC-hhhhhhhcccCCCC--CCCCccCCCceeEEEEEecCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPIN-PSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~ 123 (378)
+||++++..++. +++.+.+.|.++++||+|||.++||| ++|++.+.|.++.. ..+|.++|||++|+|+++|++
T Consensus 1 ~~ka~~~~~~~~----l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 1 KTQAIVLSGPNQ----IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred CceEEEEeCCCe----EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 468898887654 88999999999999999999999995 79999888876432 257999999999999999999
Q ss_pred CCCCCCCCEEeeCCC--------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064 124 VTRLAPGDWVIPSPP--------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195 (378)
Q Consensus 124 v~~~~~Gd~V~~~~~--------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~ 195 (378)
+ +|++||||+.... ..|+|+||++++++.++++|++++++. ++++ .+.|||+++.+ . ..++++|+|+
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~ 151 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV 151 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence 8 6999999986321 159999999999999999999999865 4454 47899999976 3 3468999999
Q ss_pred CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cH
Q 017064 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SA 274 (378)
Q Consensus 196 g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~ 274 (378)
|+ |++|++++|+||++|++++++++. .+++++.++. .+++|+.+. .+. ++|+||||+|++ .+
T Consensus 152 G~-G~vG~~a~q~ak~~G~~~v~~~~~---~~~rl~~a~~---~~~i~~~~~---------~~~-g~Dvvid~~G~~~~~ 214 (308)
T TIGR01202 152 GH-GTLGRLLARLTKAAGGSPPAVWET---NPRRRDGATG---YEVLDPEKD---------PRR-DYRAIYDASGDPSLI 214 (308)
T ss_pred CC-CHHHHHHHHHHHHcCCceEEEeCC---CHHHHHhhhh---ccccChhhc---------cCC-CCCEEEECCCCHHHH
Confidence 87 999999999999999997777643 5566655543 344544321 122 399999999986 46
Q ss_pred HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---cee
Q 017064 275 SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MEL 351 (378)
Q Consensus 275 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~ 351 (378)
+.++++++++|+++++|... .+..++...++.+++++.++... ..+.++++++++++|++++. +++
T Consensus 215 ~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~l~~~g~i~~~~~it~~ 283 (308)
T TIGR01202 215 DTLVRRLAKGGEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEW----------QPGDLHAVRELIESGALSLDGLITHQ 283 (308)
T ss_pred HHHHHhhhcCcEEEEEeecC-CCcccccchhhhcceEEEEeccc----------chhHHHHHHHHHHcCCCChhhcccee
Confidence 89999999999999999653 34556666777889998876432 12568899999999999863 578
Q ss_pred eccccHHHHHHHHHccCCCCCceEee
Q 017064 352 VPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 352 ~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
|||+|+++||+.+.++...+ |++|+
T Consensus 284 ~~l~~~~~A~~~~~~~~~~~-Kv~~~ 308 (308)
T TIGR01202 284 RPASDAAEAYMTAFSDPDCL-KMILD 308 (308)
T ss_pred ecHHHHHHHHHHHhcCcCce-EEEeC
Confidence 99999999999988777777 99874
No 32
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=4.7e-42 Score=323.41 Aligned_cols=305 Identities=22% Similarity=0.280 Sum_probs=235.8
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC--CCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
||++++...+. + ++++++|.|.++++||+|||.++|+|++|++.+.|.++..+ .+|.++|||++|+|+++|++ +
T Consensus 1 mka~~~~~~~~--~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~ 76 (355)
T cd08230 1 MKAIAVKPGKP--G-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76 (355)
T ss_pred CceeEecCCCC--C-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence 68888875332 2 78999999999999999999999999999999998754322 35789999999999999999 9
Q ss_pred CCCCCCEEeeCCC-----------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064 126 RLAPGDWVIPSPP-----------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 176 (378)
Q Consensus 126 ~~~~Gd~V~~~~~-----------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta 176 (378)
.|++||+|+..+. .+|+|+||++++++.++++|++++ ++ +++..+..++
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~ 154 (355)
T cd08230 77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVV 154 (355)
T ss_pred CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cc-eeecchHHHH
Confidence 9999999986431 248899999999999999999999 43 4444456555
Q ss_pred HHHHHHH------hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHH
Q 017064 177 LRMLEDF------TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250 (378)
Q Consensus 177 ~~~l~~~------~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~ 250 (378)
+.++... ..+.+|++|+|.|+ |++|++++|+||++|++|+++.+.. .+++|+++++++|+++ +++.+.+..
T Consensus 155 ~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~Ga~~-v~~~~~~~~ 231 (355)
T cd08230 155 EKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEELGATY-VNSSKTPVA 231 (355)
T ss_pred HHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE-ecCCccchh
Confidence 5544321 23578999999997 9999999999999999988887421 1578889999999997 455544433
Q ss_pred HHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCC-CCcccc----chhhhhcCceEEEEechhhhccc
Q 017064 251 NVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSK-KPITVS----TSAFIFKDLSLKGFWLQKWLSSE 324 (378)
Q Consensus 251 ~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 324 (378)
+ .+. .. ++|+||||+|.+ .+..++++++++|+++.+|.... ...+++ ...++.+++++.|+....
T Consensus 232 ~-~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~----- 302 (355)
T cd08230 232 E-VKL--VG-EFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN----- 302 (355)
T ss_pred h-hhh--cC-CCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc-----
Confidence 3 222 22 499999999985 56889999999999999996654 233444 345677999999975431
Q ss_pred cHHHHHHHHHHHHHHHHcCC------cccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 325 KATECRNMIDYLLCLAREGK------LKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~g~------~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.+.++++++++.++. +++. +++|+++|+++|++.+.++ .+ |+||+|
T Consensus 303 -----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~--~~-K~v~~~ 355 (355)
T cd08230 303 -----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDG--EI-KVVIEW 355 (355)
T ss_pred -----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccC--Ce-EEEeeC
Confidence 134567777877766 4443 5689999999999988754 35 999986
No 33
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.1e-41 Score=320.61 Aligned_cols=306 Identities=25% Similarity=0.342 Sum_probs=256.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC---CC-------CCCCCccCCCceeEEE
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY---PV-------RPKVPAVGGYEGVGEV 117 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~-------~~~~p~~~G~e~~G~V 117 (378)
||++++..+++ +.+++++.|.++++||+||+.++++|++|+..+.+.. +. ....|.++|||++|+|
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V 76 (351)
T cd08233 1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV 76 (351)
T ss_pred CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence 68999987654 8899999999999999999999999999988765421 10 1136889999999999
Q ss_pred EEecCCCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhcc
Q 017064 118 YSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (378)
Q Consensus 118 ~~vG~~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~ 170 (378)
+++|+++++|++||+|++... ..|+|++|++++.+.++++|+++++++++.+
T Consensus 77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~- 155 (351)
T cd08233 77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV- 155 (351)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence 999999999999999987321 1489999999999999999999999999876
Q ss_pred ccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-
Q 017064 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE- 248 (378)
Q Consensus 171 ~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~- 248 (378)
.+..|||+++ ..+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++. .++++.++++++|++.++++++.+
T Consensus 156 ~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~----~~~~~~~~~~~~ga~~~i~~~~~~~ 229 (351)
T cd08233 156 EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSE----PSEARRELAEELGATIVLDPTEVDV 229 (351)
T ss_pred cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCccCH
Confidence 5688999999 5688999999999986 9999999999999999 676665 478888888999999999987654
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHH
Q 017064 249 VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKAT 327 (378)
Q Consensus 249 ~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (378)
.+.+++.+++.+ +|++|||+|. ..+..++++++++|+++.+|... .+.++++..++.+++++.+.....
T Consensus 230 ~~~l~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~-------- 299 (351)
T cd08233 230 VAEVRKLTGGGG-VDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYT-------- 299 (351)
T ss_pred HHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccC--------
Confidence 456777777655 9999999986 56789999999999999999654 445667777888999999875431
Q ss_pred HHHHHHHHHHHHHHcCCcccc---ceeeccccH-HHHHHHHHccCCC-CCceEee
Q 017064 328 ECRNMIDYLLCLAREGKLKYD---MELVPFNNF-QTALSKALGLHGS-QPKQVIK 377 (378)
Q Consensus 328 ~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~-~~a~~~~~~~~~~-g~kvvv~ 377 (378)
.+.++++++++++|.+++. .++|+++|+ ++|++.+.+++.. | |+||.
T Consensus 300 --~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~-k~v~~ 351 (351)
T cd08233 300 --REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHV-KILVS 351 (351)
T ss_pred --cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCce-EEEeC
Confidence 2567889999999999653 458999996 7999999999975 6 99873
No 34
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=8.5e-42 Score=327.04 Aligned_cols=311 Identities=15% Similarity=0.130 Sum_probs=247.7
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhh-cccC-CC----CCCCCccCCCceeEEEEEe
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVY-PV----RPKVPAVGGYEGVGEVYSV 120 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~-~~----~~~~p~~~G~e~~G~V~~v 120 (378)
.|+++++..++. ++++++|.|.++++||+|||.++|+|++|++.+ .|.. +. ..++|.++|||++|+|+++
T Consensus 2 ~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 2 KTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred CcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 478999988764 889999999999999999999999999999976 4532 11 1136889999999999999
Q ss_pred cCCCC-CCCCCCEEeeCCC---------------CCcccccceeccCC----ceEEcCCCCCHhhhhhc-ccc-HHHHHH
Q 017064 121 GSAVT-RLAPGDWVIPSPP---------------SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATI-IVN-PLTALR 178 (378)
Q Consensus 121 G~~v~-~~~~Gd~V~~~~~---------------~~G~~~~~~~~~~~----~~~~iP~~~~~~~aa~~-~~~-~~ta~~ 178 (378)
|++|+ +|++||||++.+. .+|+|+||++++++ +++++|+++++++++.+ +++ ..+++.
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~ 157 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT 157 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence 99998 6999999987531 14899999999987 68999999999999866 311 112333
Q ss_pred HH--------HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC---cEEEEecCCCCcHHHHHHHHhC--------CCc
Q 017064 179 ML--------EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLKGL--------GAD 239 (378)
Q Consensus 179 ~l--------~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~---~vi~~~~~~~~~~~~~~~~~~~--------ga~ 239 (378)
++ ...+++++|++|+|+|++|++|++++|+|+++|+ +|+++. .+++|++.++++ |++
T Consensus 158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~----~~~~r~~~a~~~~~~~~~~~Ga~ 233 (410)
T cd08238 158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTD----VNDERLARAQRLFPPEAASRGIE 233 (410)
T ss_pred hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEc----CCHHHHHHHHHhccccccccCce
Confidence 32 2457889999999999889999999999999864 677776 578899999887 777
Q ss_pred -EEEccCc--ccHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC--CCccccchhhhhcCceEE
Q 017064 240 -EVFTESQ--LEVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK--KPITVSTSAFIFKDLSLK 313 (378)
Q Consensus 240 -~vi~~~~--~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 313 (378)
.++++.+ ...+.+++++++.+ +|++||++|. ..+..++++++++|+++.++.... .+.+++...++.+++++.
T Consensus 234 ~~~i~~~~~~~~~~~v~~~t~g~g-~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~ 312 (410)
T cd08238 234 LLYVNPATIDDLHATLMELTGGQG-FDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYV 312 (410)
T ss_pred EEEECCCccccHHHHHHHHhCCCC-CCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEE
Confidence 5677653 33456777887766 9999999986 566889999999999887754322 124566677888999999
Q ss_pred EEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 314 GFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
|+.... .+.++++++++++|++++. +++|+|+|+++|++.+. ++..| |+|+.+
T Consensus 313 g~~~~~----------~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~g-Kvvl~~ 368 (410)
T cd08238 313 GTSGGN----------TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGG-KKLIYT 368 (410)
T ss_pred EeCCCC----------HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCc-eEEEEC
Confidence 976431 2457889999999999973 57899999999999999 77788 999864
No 35
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.8e-41 Score=314.97 Aligned_cols=309 Identities=26% Similarity=0.335 Sum_probs=253.8
Q ss_pred ccceEEEccc--CCC-ccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCC
Q 017064 47 PSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 47 ~~~a~~~~~~--~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~ 123 (378)
+|++|++..+ +.+ .+.+++.+.+.|.|+++||+|||.++|+|+.|...... + .+.|.++|+|++|+|++ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~ 74 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---K 74 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---C
Confidence 5899999984 443 24589999999999999999999999999987652211 1 13588999999999995 4
Q ss_pred CCCCCCCCEEeeCCCCCcccccceeccCC---ceEEcCCCCC-----HhhhhhccccHHHHHHHHHHHhccCCCCEEEEe
Q 017064 124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQS---VWHKVSKDSP-----MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195 (378)
Q Consensus 124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~---~~~~iP~~~~-----~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~ 195 (378)
+++|++||+|++. ++|++|++++.+ .++++|++++ ...+++++++++|||+++...+++++|++|||+
T Consensus 75 ~~~~~~Gd~V~~~----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ 150 (329)
T cd08294 75 NSKFPVGTIVVAS----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN 150 (329)
T ss_pred CCCCCCCCEEEee----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 5689999999975 579999999999 9999999998 233346788999999999888999999999999
Q ss_pred CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA 274 (378)
Q Consensus 196 g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~ 274 (378)
|++|++|++++|+|+++|++|++++ .++++.++++++|+++++++++.+ .+.+++.++ .+ +|++||++|++.+
T Consensus 151 ga~g~vG~~aiqlA~~~G~~vi~~~----~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~g-vd~vld~~g~~~~ 224 (329)
T cd08294 151 GAAGAVGSLVGQIAKIKGCKVIGCA----GSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DG-IDCYFDNVGGEFS 224 (329)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CC-cEEEEECCCHHHH
Confidence 9999999999999999999999888 578899999999999999988654 455666665 34 9999999999888
Q ss_pred HHHHHhcccCCEEEEEecCCCCCc------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc
Q 017064 275 SKVLKFLSQGGTMVTYGGMSKKPI------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 348 (378)
Q Consensus 275 ~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 348 (378)
..++++++++|+++.+|....... ......++.+++++.++....+ .....+.++++++++++|.+++.
T Consensus 225 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~ 299 (329)
T cd08294 225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRW-----QDRWPEALKQLLKWIKEGKLKYR 299 (329)
T ss_pred HHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhh-----HHHHHHHHHHHHHHHHCCCCcCC
Confidence 999999999999999985432111 1123346678888888765432 13445678899999999999875
Q ss_pred -ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 349 -MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 349 -~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
...|+++++++|++.+.+++..| |+|+++
T Consensus 300 ~~~~~~l~~~~~A~~~~~~~~~~g-kvvv~~ 329 (329)
T cd08294 300 EHVTEGFENMPQAFIGMLKGENTG-KAIVKV 329 (329)
T ss_pred cccccCHHHHHHHHHHHHcCCCCC-eEEEeC
Confidence 35699999999999999999999 999975
No 36
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.2e-41 Score=315.23 Aligned_cols=294 Identities=23% Similarity=0.336 Sum_probs=242.9
Q ss_pred ceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCc
Q 017064 62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG 141 (378)
Q Consensus 62 ~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G 141 (378)
++++.+.+.|.|++|||+|||.++|+|+.++. |.++.. ..|.++|+|++|+|+++|+ .|++||+|++. +
T Consensus 18 ~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----~ 86 (325)
T TIGR02825 18 DFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----P 86 (325)
T ss_pred ceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe----c
Confidence 38899999999999999999999999997654 333222 3478999999999999874 59999999975 4
Q ss_pred ccccceeccCCceEEc----CCCCCHhhh-hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcE
Q 017064 142 TWQSYVVKDQSVWHKV----SKDSPMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216 (378)
Q Consensus 142 ~~~~~~~~~~~~~~~i----P~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~v 216 (378)
+|++|++++.+++.++ |++++++++ ++++++++|||+++...+++++|++|||+|++|++|++++|+||++|++|
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~V 166 (325)
T TIGR02825 87 GWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 166 (325)
T ss_pred CceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEE
Confidence 6999999999988887 999999997 68899999999999888999999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHH-HHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCC
Q 017064 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKN-VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 217 i~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~-i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 294 (378)
++++ .++++.++++++|+++++++++. +..+ ++..+ +.| +|++||++|++.+..++++++++|+++.+|...
T Consensus 167 i~~~----~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~g-vdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 167 VGAA----GSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDG-YDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred EEEe----CCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCC-eEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence 9888 57889999999999999998763 4444 44444 434 999999999988899999999999999998543
Q ss_pred CC----Ccc--ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHHcc
Q 017064 295 KK----PIT--VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGL 367 (378)
Q Consensus 295 ~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~l~~~~~a~~~~~~~ 367 (378)
.. ... .....++.+++++.++....+ .+....+.++++++++++|++++.. ..|+++++++|++.+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~ 316 (325)
T TIGR02825 241 TYNRTGPLPPGPPPEIVIYQELRMEGFIVNRW----QGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKG 316 (325)
T ss_pred hcccCCCCCCCcchHHHhhhcceEeEEEehhh----hhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcC
Confidence 21 111 123345668888888765433 2233456788999999999999864 569999999999999999
Q ss_pred CCCCCceEee
Q 017064 368 HGSQPKQVIK 377 (378)
Q Consensus 368 ~~~g~kvvv~ 377 (378)
+..| |+|++
T Consensus 317 ~~~g-kvVv~ 325 (325)
T TIGR02825 317 ENLG-KTIVK 325 (325)
T ss_pred CCCC-eEEeC
Confidence 9998 99874
No 37
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.4e-41 Score=316.59 Aligned_cols=303 Identities=22% Similarity=0.249 Sum_probs=239.2
Q ss_pred cceEEeeeCCCCCC-CCcEEEEEEeeccChhhhhhhcccC--CCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC
Q 017064 61 SVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP 137 (378)
Q Consensus 61 ~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 137 (378)
+.+++.+.+.|.+. ++||+|||+++|||+.|+....... ....++|.++|||++|+|+++|+++++|++||+|++..
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 35889999999874 9999999999999999965433211 11124678999999999999999999999999998752
Q ss_pred CCCcccccceeccCCceEEcCCCCCHhh----hhhccccHHHHHHHHHHHhccCCC--CEEEEeCCCchHHHHHHHHHHH
Q 017064 138 PSSGTWQSYVVKDQSVWHKVSKDSPMEY----AATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARH 211 (378)
Q Consensus 138 ~~~G~~~~~~~~~~~~~~~iP~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~VlV~g~~g~~G~~av~la~~ 211 (378)
++|+||+++++++++++|+++++.+ +++++.+++|||+++.+.+++++| ++|||+|++|++|++++|+|++
T Consensus 101 ---~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~ 177 (345)
T cd08293 101 ---WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL 177 (345)
T ss_pred ---CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 5799999999999999999864322 456777899999999887888877 9999999999999999999999
Q ss_pred cCC-cEEEEecCCCCcHHHHHHHHh-CCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEE
Q 017064 212 RGI-HSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288 (378)
Q Consensus 212 ~g~-~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v 288 (378)
+|+ +|++++ .++++.+.+++ +|+++++++++.+ .+.++++++ .| +|++||++|+..+..++++++++|+++
T Consensus 178 ~G~~~Vi~~~----~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~g-vd~vid~~g~~~~~~~~~~l~~~G~iv 251 (345)
T cd08293 178 LGCSRVVGIC----GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EG-VDVYFDNVGGEISDTVISQMNENSHII 251 (345)
T ss_pred cCCCEEEEEc----CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CC-ceEEEECCCcHHHHHHHHHhccCCEEE
Confidence 999 788887 57888888876 9999999987654 456777765 34 999999999988899999999999999
Q ss_pred EEecCCCC--Cccc----cc--hhh-hhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHH
Q 017064 289 TYGGMSKK--PITV----ST--SAF-IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQ 358 (378)
Q Consensus 289 ~~g~~~~~--~~~~----~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~ 358 (378)
.+|..... +... .. ..+ ..+++++.++.... .+....+.++++++++++|.+++... .+++++++
T Consensus 252 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~ 326 (345)
T cd08293 252 LCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLN-----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAG 326 (345)
T ss_pred EEeeeecccCccCccccccchhHHHhhhcceEEEEEEeec-----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHH
Confidence 99853221 1111 11 111 22444444332211 12344567888999999999987643 46999999
Q ss_pred HHHHHHHccCCCCCceEeeC
Q 017064 359 TALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 359 ~a~~~~~~~~~~g~kvvv~~ 378 (378)
+|++.+.+++..| |+|+++
T Consensus 327 ~A~~~~~~~~~~g-kvvl~~ 345 (345)
T cd08293 327 EAFQSMMNGGNIG-KQIVKV 345 (345)
T ss_pred HHHHHHhcCCCCC-eEEEEC
Confidence 9999999999888 999975
No 38
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.9e-41 Score=316.33 Aligned_cols=311 Identities=25% Similarity=0.271 Sum_probs=249.2
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCc-cCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-VGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~ 126 (378)
|++++...++.. .++++.+.|.+.++||+|||.++|||++|++.+++..+.. +.|. ++|||++|+|+++| .++.
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V~evG-~~~~ 75 (350)
T COG1063 1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEVVEVG-VVRG 75 (350)
T ss_pred CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEEEEec-cccC
Confidence 566666665542 3366666667899999999999999999999999976654 3344 99999999999999 7788
Q ss_pred CCCCCEEeeCCCC-------------------------------CcccccceeccCCceEE-cCCCCCHhhhhhccccHH
Q 017064 127 LAPGDWVIPSPPS-------------------------------SGTWQSYVVKDQSVWHK-VSKDSPMEYAATIIVNPL 174 (378)
Q Consensus 127 ~~~Gd~V~~~~~~-------------------------------~G~~~~~~~~~~~~~~~-iP~~~~~~~aa~~~~~~~ 174 (378)
+++||||+..+.. +|+|+||+.+|.+++++ +|++++++.|+... ++.
T Consensus 76 ~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~e-pla 154 (350)
T COG1063 76 FKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTE-PLA 154 (350)
T ss_pred CCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcC-hhh
Confidence 9999999876531 48999999999765555 58888655555555 688
Q ss_pred HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcc-cHHHH
Q 017064 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNV 252 (378)
Q Consensus 175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~-~~~~i 252 (378)
++|++........++++|+|+|+ |++|++++++|+..|+..+++++ .+++|++++++ .|++.+++.... ....+
T Consensus 155 ~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d---~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~ 230 (350)
T COG1063 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVD---RSPERLELAKEAGGADVVVNPSEDDAGAEI 230 (350)
T ss_pred hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence 89877555566666679999999 99999999999999997777775 48999999998 777777776663 45678
Q ss_pred HHHhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064 253 KGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 331 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (378)
.++++++| +|++|||+|... +.+++++++++|+++++|........++...++.|++++.|+.... ...
T Consensus 231 ~~~t~g~g-~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~---------~~~ 300 (350)
T COG1063 231 LELTGGRG-ADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS---------GRE 300 (350)
T ss_pred HHHhCCCC-CCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCC---------Ccc
Confidence 88888877 999999999754 5899999999999999996644322567788999999999984311 224
Q ss_pred HHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 332 MIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 332 ~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.++.+++++.+|++++. ++.++++++++||+.+.+.+....|+++.+
T Consensus 301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 68889999999999986 578999999999999998665334999875
No 39
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=5.1e-41 Score=320.63 Aligned_cols=318 Identities=21% Similarity=0.280 Sum_probs=264.2
Q ss_pred CCcccceEEEc--ccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCC---------CCCCccCCCc
Q 017064 44 MSPPSKAVVYE--REGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR---------PKVPAVGGYE 112 (378)
Q Consensus 44 ~~~~~~a~~~~--~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e 112 (378)
.|.+|+++++. ..+.+.+.+++.+++.|.++++||+|||.++++|++|+....|..... ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 78889998885 344444448899999999999999999999999999998876641100 0123588999
Q ss_pred eeEEEEEecCCCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhh
Q 017064 113 GVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEY 165 (378)
Q Consensus 113 ~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~ 165 (378)
++|+|+++|++++.+++||+|++.+. ..|+|++|++++...++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999998642 148999999999999999999999999
Q ss_pred hhhccccHHHHHHHHHHH--hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064 166 AATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT 243 (378)
Q Consensus 166 aa~~~~~~~ta~~~l~~~--~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~ 243 (378)
++.+++++.|||+++... +++++|++|+|+|++|++|++++++|+++|+++++++ .++++.+.++++|++++++
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~----~s~~~~~~~~~~G~~~~i~ 244 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVV----SSEEKAEYCRALGAEGVIN 244 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCCEEEc
Confidence 999999999999998765 6789999999999999999999999999999998887 5788999999999999998
Q ss_pred cCcc-----------------------cHHHHHHHhcCC-CCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcc
Q 017064 244 ESQL-----------------------EVKNVKGLLANL-PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT 299 (378)
Q Consensus 244 ~~~~-----------------------~~~~i~~~~~~~-g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 299 (378)
.++. +...+.+++++. + +|++|||+|+..+..++++++++|+++.+|........
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g-~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 323 (393)
T cd08246 245 RRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGRED-PDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT 323 (393)
T ss_pred ccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCC-CeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence 6432 234577778876 5 99999999988888999999999999999865443344
Q ss_pred ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHcc-CCCCCceEee
Q 017064 300 VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGL-HGSQPKQVIK 377 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~-~~~g~kvvv~ 377 (378)
++...++.++.++.+.+...+ +.+.+++++++++.+.+. ++.|+++++++|++.+.++ +..| |+++-
T Consensus 324 ~~~~~l~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~g-kvvv~ 392 (393)
T cd08246 324 YDNRYLWMRQKRIQGSHFAND----------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVG-NMAVL 392 (393)
T ss_pred CcHHHHhhheeEEEecccCcH----------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccc-eEEEe
Confidence 555666778888888754321 457788899999998865 4689999999999999988 7888 88863
No 40
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.8e-41 Score=316.02 Aligned_cols=293 Identities=18% Similarity=0.191 Sum_probs=230.2
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC---CCCCCccCCCceeEEEEEecCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---RPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
+++++..+++ +++++.|.|. +++||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|.+
T Consensus 4 ~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 4 QVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred cceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 6777877775 8999999985 9999999999999999999999986532 1257999999999999998764
Q ss_pred CCCCCCEEeeCCC-----------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHH
Q 017064 126 RLAPGDWVIPSPP-----------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED 182 (378)
Q Consensus 126 ~~~~Gd~V~~~~~-----------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~ 182 (378)
+|++||||+..+. .+|+|+||+++|+++++++|+++++++|+++. +..++|+++..
T Consensus 77 ~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~ 155 (341)
T cd08237 77 TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISR 155 (341)
T ss_pred ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHH
Confidence 7999999987532 14889999999999999999999999887654 68889998865
Q ss_pred H--hccCCCCEEEEeCCCchHHHHHHHHHHH-cC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcC
Q 017064 183 F--TTLNSGDSIVQNGATSIVGQCIIQIARH-RG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258 (378)
Q Consensus 183 ~--~~~~~g~~VlV~g~~g~~G~~av~la~~-~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~ 258 (378)
. +.+++|++|||.|+ |++|++++|+|++ .| ++|+++. .+++|++.++..++++.++. ...+
T Consensus 156 ~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~----~~~~k~~~a~~~~~~~~~~~----------~~~~ 220 (341)
T cd08237 156 FEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFG----KHQEKLDLFSFADETYLIDD----------IPED 220 (341)
T ss_pred HhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEe----CcHhHHHHHhhcCceeehhh----------hhhc
Confidence 3 35688999999997 9999999999986 55 5677766 46788888888776654321 1122
Q ss_pred CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHH
Q 017064 259 LPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID 334 (378)
Q Consensus 259 ~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (378)
.+ +|+|||++|+. .+..++++++++|+++.+|.. ..+.+++...++.+++++.|+.... .+.++
T Consensus 221 ~g-~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~k~~~i~g~~~~~----------~~~~~ 288 (341)
T cd08237 221 LA-VDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVS-EYPVPINTRMVLEKGLTLVGSSRST----------REDFE 288 (341)
T ss_pred cC-CcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeec-CCCcccCHHHHhhCceEEEEecccC----------HHHHH
Confidence 24 99999999953 468899999999999999954 3344566677888999999975421 24577
Q ss_pred HHHHHHHcC-----Ccccc-ceeeccc---cHHHHHHHHHccCCCCCceEeeC
Q 017064 335 YLLCLAREG-----KLKYD-MELVPFN---NFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 335 ~~~~~l~~g-----~~~~~-~~~~~l~---~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++++.++ .+++. .++|+++ +++++|+.+.++ ..| |+||++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~g-Kvvi~~ 339 (341)
T cd08237 289 RAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWG-KTVMEW 339 (341)
T ss_pred HHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-Ccc-eEEEEe
Confidence 889999998 34444 3679985 566666666554 677 999875
No 41
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=9e-41 Score=313.07 Aligned_cols=309 Identities=26% Similarity=0.326 Sum_probs=263.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
||++++..++.+ +.+.+.+.|.+++++|+||+.++++|++|+....|.++. ...+|.++|+|++|+|+++|+++.
T Consensus 1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~ 77 (340)
T cd05284 1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD 77 (340)
T ss_pred CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence 688999887643 788899999999999999999999999999998887653 234688999999999999999999
Q ss_pred CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064 126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (378)
Q Consensus 126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~ 179 (378)
.+++||+|++... ..|+|++|+.++.++++++|+++++++++++++.++|||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~ 157 (340)
T cd05284 78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157 (340)
T ss_pred cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 9999999997641 14899999999999999999999999999999999999999
Q ss_pred HHHH-hccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhc
Q 017064 180 LEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257 (378)
Q Consensus 180 l~~~-~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~ 257 (378)
+... ..+.+|++|||+|+ |++|++++|+|+.+| ++|++++ .++++.+.++++|++++++++.....+++++++
T Consensus 158 l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 232 (340)
T cd05284 158 VKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVD----RSEEALKLAERLGADHVLNASDDVVEEVRELTG 232 (340)
T ss_pred HHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEe----CCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhC
Confidence 9876 46889999999996 679999999999999 7998887 467888888999999999887765566777777
Q ss_pred CCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064 258 NLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336 (378)
Q Consensus 258 ~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (378)
+.+ +|+++||+|+ .....++++++++|+++.+|.... ..++....+.+++++.++... ..+.++++
T Consensus 233 ~~~-~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 299 (340)
T cd05284 233 GRG-ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG----------TRAELVEV 299 (340)
T ss_pred CCC-CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEecc----------cHHHHHHH
Confidence 655 9999999997 667899999999999999985432 333444445789998887542 12457788
Q ss_pred HHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 337 ~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++++|.+++.++.|+++++++|++.+.+++..| |+|+.+
T Consensus 300 ~~~l~~g~l~~~~~~~~~~~~~~a~~~~~~~~~~g-kvv~~~ 340 (340)
T cd05284 300 VALAESGKVKVEITKFPLEDANEALDRLREGRVTG-RAVLVP 340 (340)
T ss_pred HHHHHhCCCCcceEEEeHHHHHHHHHHHHcCCccc-eEEecC
Confidence 89999999988778899999999999999999888 998864
No 42
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=9.9e-41 Score=311.80 Aligned_cols=304 Identities=21% Similarity=0.288 Sum_probs=258.5
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++.. +++++.|.|.+.++||+||+.++++|++|+..+.|..+.. ..|.++|||++|+|+++|+++.++
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~ 76 (333)
T cd08296 1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL-SYPRVPGHEVVGRIDAVGEGVSRW 76 (333)
T ss_pred CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC-CCCcccCcceeEEEEEECCCCccC
Confidence 689999988543 8889999999999999999999999999999988865432 458899999999999999999999
Q ss_pred CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
++||+|++.+ ...|+|++|+.++.+.++++|+++++++++.+++++.+||+++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 77 KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 9999998631 1148899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCC
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL 259 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~ 259 (378)
.. ..+.++++|||+| +|++|++++++|+++|+++++++ .++++.+.++++|+++++++...+. ..+++. .
T Consensus 157 ~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~-~-- 227 (333)
T cd08296 157 RN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAIS----RGSDKADLARKLGAHHYIDTSKEDVAEALQEL-G-- 227 (333)
T ss_pred Hh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHcCCcEEecCCCccHHHHHHhc-C--
Confidence 76 4899999999999 59999999999999999998887 4778899999999999998876543 345444 2
Q ss_pred CCCcEEEeCCC-CccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064 260 PEPALGFNCVG-GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338 (378)
Q Consensus 260 g~~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (378)
++|+++|++| +..+..++++++++|+++.+|... ...+++...++.+++++.++.... ...++.+++
T Consensus 228 -~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~ 295 (333)
T cd08296 228 -GAKLILATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT----------ALDSEDTLK 295 (333)
T ss_pred -CCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC----------HHHHHHHHH
Confidence 3999999987 466788999999999999999654 344555566778999999986431 135667788
Q ss_pred HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
+++.+.+++.++.|+++++.+|++.+.+++..| |+|++
T Consensus 296 ~~~~~~l~~~v~~~~~~~~~~a~~~~~~~~~~g-k~v~~ 333 (333)
T cd08296 296 FSALHGVRPMVETFPLEKANEAYDRMMSGKARF-RVVLT 333 (333)
T ss_pred HHHhCCCCceEEEEEHHHHHHHHHHHHCCCCce-eEEeC
Confidence 888998887677899999999999999999999 99874
No 43
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=8.6e-41 Score=315.70 Aligned_cols=308 Identities=24% Similarity=0.322 Sum_probs=254.3
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC--
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR-- 126 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~-- 126 (378)
|++++..+++. +++++.+.|.++++||+|||.++++|++|+....|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (361)
T cd08231 2 RAAVLTGPGKP---LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDV 77 (361)
T ss_pred eEEEEcCCCCC---CEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCccccc
Confidence 67888887742 889999999999999999999999999999999887653 356889999999999999999986
Q ss_pred ----CCCCCEEeeCCC---------------------------------CCcccccceeccCC-ceEEcCCCCCHhhhhh
Q 017064 127 ----LAPGDWVIPSPP---------------------------------SSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT 168 (378)
Q Consensus 127 ----~~~Gd~V~~~~~---------------------------------~~G~~~~~~~~~~~-~~~~iP~~~~~~~aa~ 168 (378)
|++||+|++.+. ..|+|++|++++++ +++++|++++++++++
T Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~ 157 (361)
T cd08231 78 AGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP 157 (361)
T ss_pred cCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHH
Confidence 999999988631 24899999999996 7999999999999999
Q ss_pred ccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 169 ~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
++++++|||+++.....+.+|++|||+|+ |++|++++|+|+++|+ +|++++ .++++.++++++|++.+++.+..
T Consensus 158 ~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~ 232 (361)
T cd08231 158 ANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVID----GSPERLELAREFGADATIDIDEL 232 (361)
T ss_pred hcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCCeEEcCccc
Confidence 98999999999988666779999999985 9999999999999999 888776 47888889999999999987654
Q ss_pred cH----HHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEEechhhh
Q 017064 248 EV----KNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWL 321 (378)
Q Consensus 248 ~~----~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (378)
.. ..+++.+++.+ +|++|||+|+ ..+..++++++++|+++.+|.... ...+++...++.+++++.++....
T Consensus 233 ~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 309 (361)
T cd08231 233 PDPQRRAIVRDITGGRG-ADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD-- 309 (361)
T ss_pred ccHHHHHHHHHHhCCCC-CcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC--
Confidence 21 35777777766 9999999987 456899999999999999986532 223444455678999998876432
Q ss_pred ccccHHHHHHHHHHHHHHHHcC--Ccc--cc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 322 SSEKATECRNMIDYLLCLAREG--KLK--YD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~l~~g--~~~--~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+ +.++++++++.++ .++ .. +++|+++++++|++.+++++ .+ |+||++
T Consensus 310 ----~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~-k~vi~~ 361 (361)
T cd08231 310 ----P----SHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-AL-KVVIDP 361 (361)
T ss_pred ----c----hhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ce-EEEeCC
Confidence 1 2356666777766 333 23 56799999999999998876 46 999874
No 44
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-40 Score=308.73 Aligned_cols=324 Identities=26% Similarity=0.288 Sum_probs=272.5
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
|||++++..++.... +.+.+.+.|++.++||+|||.++++|+.|.....|..+.....|.++|||++|+|+++|++++.
T Consensus 1 ~m~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~ 79 (334)
T PTZ00354 1 MMRAVTLKGFGGVDV-LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKR 79 (334)
T ss_pred CcEEEEEEecCCCcc-eEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCC
Confidence 689999998876543 7778888888999999999999999999999888765433345678999999999999999999
Q ss_pred CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (378)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av 206 (378)
+++||+|+++.. .|+|++|++++.+.++++|+++++.+++.+++++.+||+++...+.+.+|++|+|+|++|++|++++
T Consensus 80 ~~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~ 158 (334)
T PTZ00354 80 FKEGDRVMALLP-GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAA 158 (334)
T ss_pred CCCCCEEEEecC-CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence 999999998753 4899999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc--cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG 284 (378)
Q Consensus 207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~ 284 (378)
++|+++|+++++++ .++++.+.++++|++++++.... ....+.+.+++.+ +|++|||+|+..+..++++++++
T Consensus 159 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~ 233 (334)
T PTZ00354 159 QLAEKYGAATIITT----SSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKG-VNLVLDCVGGSYLSETAEVLAVD 233 (334)
T ss_pred HHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhccC
Confidence 99999999988877 47888888899999999987653 3466777777666 99999999988889999999999
Q ss_pred CEEEEEecCCCCCcc-ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHH
Q 017064 285 GTMVTYGGMSKKPIT-VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALS 362 (378)
Q Consensus 285 G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~ 362 (378)
|+++.++........ ++...++.++.++.++..........+....+.+++++++++++.+++. .+.|++++++++++
T Consensus 234 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 313 (334)
T PTZ00354 234 GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHT 313 (334)
T ss_pred CeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHH
Confidence 999999855443333 5555666777788887654321212334455677889999999998865 46799999999999
Q ss_pred HHHccCCCCCceEeeC
Q 017064 363 KALGLHGSQPKQVIKF 378 (378)
Q Consensus 363 ~~~~~~~~g~kvvv~~ 378 (378)
.+.+++..+ |+|++|
T Consensus 314 ~~~~~~~~~-kvvv~~ 328 (334)
T PTZ00354 314 FLEQNKNIG-KVVLTV 328 (334)
T ss_pred HHHhCCCCc-eEEEec
Confidence 999888888 999875
No 45
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=5.9e-40 Score=305.34 Aligned_cols=319 Identities=22% Similarity=0.275 Sum_probs=268.2
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
||++.+.+++.+.. +++.+.+.|.+.+++|+|+|.++++|++|+....|..+. ....|.++|||++|+|+++|+++.
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~ 79 (324)
T cd08244 1 MRAIRLHEFGPPEV-LVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD 79 (324)
T ss_pred CeEEEEcCCCCccc-eEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence 68888887666543 777787777889999999999999999999988876532 224578899999999999999999
Q ss_pred CCCCCCEEeeCCC-CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064 126 RLAPGDWVIPSPP-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 204 (378)
Q Consensus 126 ~~~~Gd~V~~~~~-~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~ 204 (378)
.+++||+|++... ..|+|++|++++.++++++|+++++.+++.+++.++||| ++...++++++++|+|+|++|++|++
T Consensus 80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~ 158 (324)
T cd08244 80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSL 158 (324)
T ss_pred CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHH
Confidence 9999999998751 138999999999999999999999999999999999995 55566889999999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283 (378)
Q Consensus 205 av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~ 283 (378)
++++|+++|+++++++ .++++.+.++++|++++++..+.. .+.+.+.+++++ +|+++||+|+.....+++++++
T Consensus 159 ~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~ 233 (324)
T cd08244 159 LVQLAKAAGATVVGAA----GGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGG-VTVVLDGVGGAIGRAALALLAP 233 (324)
T ss_pred HHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCC-ceEEEECCChHhHHHHHHHhcc
Confidence 9999999999999888 467788888999999998877644 456777777666 9999999999888999999999
Q ss_pred CCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHH
Q 017064 284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALS 362 (378)
Q Consensus 284 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~ 362 (378)
+|+++.+|.....+..++....+.+++++.++....+ .+....+.+++++++++++.++.. ...|+++++++|++
T Consensus 234 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~ 309 (324)
T cd08244 234 GGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQA----ERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHA 309 (324)
T ss_pred CcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccC----CHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHH
Confidence 9999999865443334454556788999998876432 224556788889999999998765 46799999999999
Q ss_pred HHHccCCCCCceEeeC
Q 017064 363 KALGLHGSQPKQVIKF 378 (378)
Q Consensus 363 ~~~~~~~~g~kvvv~~ 378 (378)
.+.+++..| |+|+++
T Consensus 310 ~~~~~~~~~-kvv~~~ 324 (324)
T cd08244 310 ALEARSTVG-KVLLLP 324 (324)
T ss_pred HHHcCCCCc-eEEEeC
Confidence 999999998 999874
No 46
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=5.1e-40 Score=305.88 Aligned_cols=317 Identities=22% Similarity=0.267 Sum_probs=261.0
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++++.. +++++.|.|.+++++|+|||.++++|++|+....|..+.....|.++|||++|+|+++ +++.+
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~ 77 (325)
T cd05280 1 FKALVVEEQDGGVS-LFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRF 77 (325)
T ss_pred CceEEEcccCCCCc-ceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCC
Confidence 68999998886433 8999999999999999999999999999999998876554456889999999999999 56789
Q ss_pred CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhcc--C-CCCEEEEeCCCc
Q 017064 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL--N-SGDSIVQNGATS 199 (378)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~g~~VlV~g~~g 199 (378)
++||+|++... ..|+|++|+++++++++++|+++++++++.+++.+.+||+++...... . .+++|+|+|++|
T Consensus 78 ~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (325)
T cd05280 78 REGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG 157 (325)
T ss_pred CCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence 99999998631 248999999999999999999999999999999999999998765433 5 357999999999
Q ss_pred hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279 (378)
Q Consensus 200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~ 279 (378)
++|++++|+|+++|++|++++ .++++.+.++++|++++++.++.. ....+...+.+ +|++|||+|+..+..+++
T Consensus 158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~ 231 (325)
T cd05280 158 GVGSIAVAILAKLGYTVVALT----GKEEQADYLKSLGASEVLDREDLL-DESKKPLLKAR-WAGAIDTVGGDVLANLLK 231 (325)
T ss_pred HHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEcchhHH-HHHHHHhcCCC-ccEEEECCchHHHHHHHH
Confidence 999999999999999998888 478888999999999998876532 23334444444 999999999988899999
Q ss_pred hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHH
Q 017064 280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQT 359 (378)
Q Consensus 280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~ 359 (378)
+++++|+++.+|.....+..+++..++.+++++.+...... .+....+.++.+.++++.+...+....|+++++++
T Consensus 232 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (325)
T cd05280 232 QTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNC----PMELRKQVWQKLATEWKPDLLEIVVREISLEELPE 307 (325)
T ss_pred hhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecC----chhHHHHHHHHHHHHHhcCCccceeeEecHHHHHH
Confidence 99999999999965433334455555578999998765432 12334466777777778885555567899999999
Q ss_pred HHHHHHccCCCCCceEeeC
Q 017064 360 ALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 360 a~~~~~~~~~~g~kvvv~~ 378 (378)
+++.+.+++..| |+|+++
T Consensus 308 a~~~~~~~~~~g-k~vv~~ 325 (325)
T cd05280 308 AIDRLLAGKHRG-RTVVKI 325 (325)
T ss_pred HHHHHhcCCcce-EEEEeC
Confidence 999999999998 999875
No 47
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.8e-40 Score=310.90 Aligned_cols=311 Identities=25% Similarity=0.358 Sum_probs=258.3
Q ss_pred cceEEEcccCCCccceEEee-eCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-------------------CCCCCc
Q 017064 48 SKAVVYEREGPPDSVIKMIE-LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------------------RPKVPA 107 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~-~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~ 107 (378)
||++.+..++.+.. +.+.+ .+.|.+.+++|+|||.++++|++|+..+.|.++. ..++|.
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGGLDK-LVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCCccc-eeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 67888877665543 55554 5777789999999999999999999988775431 234688
Q ss_pred cCCCceeEEEEEecCCCCCCCCCCEEeeCC------------------CCCcccccceeccCCceEEcCCCCCHhhhhhc
Q 017064 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169 (378)
Q Consensus 108 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~ 169 (378)
++|||++|+|+++|++++.|++||+|++.+ ...|+|++|++++.+.++++|+++++.+++++
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 999999999999999999999999998842 01489999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH
Q 017064 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV 249 (378)
Q Consensus 170 ~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~ 249 (378)
++++.|||+++ ....+.+|++|||+|++|++|++++++|+++|++++++++ ++ +.+.++++|++.+++......
T Consensus 160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~----~~-~~~~~~~~g~~~~~~~~~~~~ 233 (350)
T cd08274 160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG----AA-KEEAVRALGADTVILRDAPLL 233 (350)
T ss_pred ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC----ch-hhHHHHhcCCeEEEeCCCccH
Confidence 99999999998 5588999999999999999999999999999999988873 33 778888999987766555444
Q ss_pred HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH
Q 017064 250 KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC 329 (378)
Q Consensus 250 ~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (378)
.+ .+.+.+.+ +|++|||+|+.....++++++++|+++.+|........++...++.+++++.++... .
T Consensus 234 ~~-~~~~~~~~-~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 301 (350)
T cd08274 234 AD-AKALGGEP-VDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG----------T 301 (350)
T ss_pred HH-HHhhCCCC-CcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecC----------C
Confidence 44 55666655 999999999988899999999999999998553322445666667899999987653 2
Q ss_pred HHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 330 RNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 330 ~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.+.++++++++.++.+++. ++.|++++++++++.+..++..+ |+|+++
T Consensus 302 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvvi~~ 350 (350)
T cd08274 302 REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVG-KLVLVP 350 (350)
T ss_pred HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCce-EEEEeC
Confidence 3568889999999998865 56899999999999999888888 999874
No 48
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=5.1e-40 Score=306.32 Aligned_cols=322 Identities=23% Similarity=0.276 Sum_probs=265.3
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
+|+++.+.+++.+.. +++.+.+.|.++++||+|||.++|+|++|+....|.++.. .+|..+|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 1 MAKRIEFHKHGGPEV-LQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred CceEEEEeccCChhH-eEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCC
Confidence 589999998887754 9999999999999999999999999999999888776532 35788999999999999999999
Q ss_pred CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (378)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av 206 (378)
+++||+|++.....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++...+.+.+|++|+|+|++|.+|++++
T Consensus 79 ~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~ 158 (327)
T PRK10754 79 IKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158 (327)
T ss_pred CCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHH
Confidence 99999998764445899999999999999999999999999999999999999988788999999999999899999999
Q ss_pred HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG 285 (378)
Q Consensus 207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G 285 (378)
++|+++|+++++++ .++++.+.++++|++++++.+..+ .+.++..+++.+ +|++|||+|+.....++++++++|
T Consensus 159 ~lak~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g 233 (327)
T PRK10754 159 QWAKALGAKLIGTV----GSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKK-VRVVYDSVGKDTWEASLDCLQRRG 233 (327)
T ss_pred HHHHHcCCEEEEEe----CCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCC-eEEEEECCcHHHHHHHHHHhccCC
Confidence 99999999999888 478888889999999999877654 356777777766 999999999988889999999999
Q ss_pred EEEEEecCCCCCccccchhhhhcCceEEE-EechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHH
Q 017064 286 TMVTYGGMSKKPITVSTSAFIFKDLSLKG-FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTAL 361 (378)
Q Consensus 286 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~ 361 (378)
+++.+|........++...+..++..+.. ...... ...+....+.+.++++++++|.+++. ++.|+++++++++
T Consensus 234 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~ 311 (327)
T PRK10754 234 LMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY--ITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAH 311 (327)
T ss_pred EEEEEccCCCCCCCcCHHHHhccCceEEecceeecc--cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHH
Confidence 99999855432222233232222221111 111111 11344556678889999999999853 5789999999999
Q ss_pred HHHHccCCCCCceEeeC
Q 017064 362 SKALGLHGSQPKQVIKF 378 (378)
Q Consensus 362 ~~~~~~~~~g~kvvv~~ 378 (378)
+.+.+++..+ |+|++.
T Consensus 312 ~~~~~~~~~~-~~~~~~ 327 (327)
T PRK10754 312 EILESRATQG-SSLLIP 327 (327)
T ss_pred HHHHcCCCcc-eEEEeC
Confidence 9999999998 999863
No 49
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=8.2e-40 Score=304.23 Aligned_cols=308 Identities=39% Similarity=0.622 Sum_probs=266.8
Q ss_pred eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcc
Q 017064 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142 (378)
Q Consensus 63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~ 142 (378)
+++.+.+.|.+.+++|+|||.++++|+.|...+.|..+..+..|.++|||++|+|+.+|++++.+++||+|++... .|+
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~g~ 92 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-EGT 92 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC-CCc
Confidence 7788888889999999999999999999999888766544456789999999999999999999999999999862 389
Q ss_pred cccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 143 ~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
|++|+.++.+.++++|+++++.+++.+++.+++||+++...+.+.+|++|||+|++|.+|++++++|+++|+++++++
T Consensus 93 ~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~-- 170 (323)
T cd05282 93 WQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVV-- 170 (323)
T ss_pred ceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEe--
Confidence 999999999999999999999999999999999999998888899999999999999999999999999999999988
Q ss_pred CCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcccc
Q 017064 223 RAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 301 (378)
Q Consensus 223 ~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 301 (378)
.++++.+.++++|++++++++.. ....+.+.+++.+ +|+++||+|+.....++++++++|+++.+|........++
T Consensus 171 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 247 (323)
T cd05282 171 --RRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAG-ARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFP 247 (323)
T ss_pred --cChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCC-ceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCC
Confidence 46778888899999999988764 4466777877766 9999999999888889999999999999986544333445
Q ss_pred chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 302 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
...+..+++++.++....+....++....+.+++++++++++.+.+. .+.|++++++++++.+.+++..+ |+|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~ 323 (323)
T cd05282 248 RSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGG-KVLLT 323 (323)
T ss_pred HHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCc-eEeeC
Confidence 55555589999998877664332566777889999999999998865 56899999999999999988888 99874
No 50
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=5.5e-40 Score=307.20 Aligned_cols=316 Identities=23% Similarity=0.295 Sum_probs=255.2
Q ss_pred ceEEEccc---CCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064 49 KAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 49 ~a~~~~~~---~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
|++++..+ +++.. ++..+.|.|.++++||+|||.++++|++|.....|..+.. .+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~vG~~v~ 78 (336)
T TIGR02817 1 KAVGYKKPLPITDPDA-LVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQPKILGWDAAGVVVAVGDEVT 78 (336)
T ss_pred CceeeccccCCCCccc-ceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC-CCCcccceeeEEEEEEeCCCCC
Confidence 46666665 55544 8889999999999999999999999999999887765432 4678999999999999999999
Q ss_pred CCCCCCEEeeCC--CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC-----CCEEEEeCCC
Q 017064 126 RLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT 198 (378)
Q Consensus 126 ~~~~Gd~V~~~~--~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlV~g~~ 198 (378)
.|++||+|++.. ...|+|++|++++.+.++++|+++++++++.++++++|||+++....++.+ |++|||+|++
T Consensus 79 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~ 158 (336)
T TIGR02817 79 LFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGA 158 (336)
T ss_pred CCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCC
Confidence 999999999874 225899999999999999999999999999999999999999988788887 9999999999
Q ss_pred chHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC-ccHHH
Q 017064 199 SIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK 276 (378)
Q Consensus 199 g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~ 276 (378)
|++|++++|+|+++ |++|++++ .++++.+.++++|+++++++.......+++. .+.+ +|+++|++++ .....
T Consensus 159 g~vg~~~~~~ak~~~G~~vi~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~-vd~vl~~~~~~~~~~~ 232 (336)
T TIGR02817 159 GGVGSILIQLARQLTGLTVIATA----SRPESQEWVLELGAHHVIDHSKPLKAQLEKL-GLEA-VSYVFSLTHTDQHFKE 232 (336)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEc----CcHHHHHHHHHcCCCEEEECCCCHHHHHHHh-cCCC-CCEEEEcCCcHHHHHH
Confidence 99999999999998 99999998 5778889999999999998655444556664 4434 9999999864 66789
Q ss_pred HHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHH--HHHHHHHHHHHHcCCccccc-eee-
Q 017064 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC--RNMIDYLLCLAREGKLKYDM-ELV- 352 (378)
Q Consensus 277 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~-~~~- 352 (378)
++++++++|+++.++.. ..++...+..+++++.+..+........+... ...++++++++.++.+++.+ ..|
T Consensus 233 ~~~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 308 (336)
T TIGR02817 233 IVELLAPQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFG 308 (336)
T ss_pred HHHHhccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccC
Confidence 99999999999987521 23344445556677776443210011112222 26788999999999998653 344
Q ss_pred --ccccHHHHHHHHHccCCCCCceEee
Q 017064 353 --PFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 353 --~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
+++++++|++.+.+++..| |+|++
T Consensus 309 ~~~~~~~~~a~~~~~~~~~~g-kvvv~ 334 (336)
T TIGR02817 309 TINAANLKRAHALIESGKARG-KIVLE 334 (336)
T ss_pred CCCHHHHHHHHHHHHcCCccc-eEEEe
Confidence 4789999999999999988 98875
No 51
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=6.7e-40 Score=313.14 Aligned_cols=319 Identities=21% Similarity=0.271 Sum_probs=263.9
Q ss_pred CCcccceEEEcc--cCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--------CC-CCC-ccCCC
Q 017064 44 MSPPSKAVVYER--EGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RP-KVP-AVGGY 111 (378)
Q Consensus 44 ~~~~~~a~~~~~--~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~-~~p-~~~G~ 111 (378)
+|.+||++++.. .+++.+.+.+.+.+.|.+++++|+||+.++++|++|.....+.... .+ ..| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 567899999965 6665445899999999999999999999999999998776553210 00 123 37999
Q ss_pred ceeEEEEEecCCCCCCCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHh
Q 017064 112 EGVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPME 164 (378)
Q Consensus 112 e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~ 164 (378)
|++|+|+++|++++.+++||+|++... ..|+|++|+.++.++++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 999999999999999999999988642 24899999999999999999999999
Q ss_pred hhhhccccHHHHHHHHHH--HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064 165 YAATIIVNPLTALRMLED--FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242 (378)
Q Consensus 165 ~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi 242 (378)
+++.+++.+.+||+++.. .+++.+|++|+|+|++|++|++++++|+++|+++++++ .++++.+.++++|++.++
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~----~~~~~~~~~~~~g~~~~v 239 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVV----SSPEKAEYCRELGAEAVI 239 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCCEEe
Confidence 999999999999999865 46789999999999999999999999999999998877 467888999999999999
Q ss_pred ccCcc-----------------------cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCcc
Q 017064 243 TESQL-----------------------EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT 299 (378)
Q Consensus 243 ~~~~~-----------------------~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 299 (378)
|.++. +...+.+++++.+ +|++|||+|...+..++++++++|+++.+|.....+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 318 (398)
T TIGR01751 240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGED-PDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD 318 (398)
T ss_pred cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence 86542 1234666676655 99999999987788999999999999999976554445
Q ss_pred ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 300 VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++...++.++.++.++....+ +.+++++++++++.+++. .++|++++++++++.+.+++..| |+|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~g-kvvv~~ 387 (398)
T TIGR01751 319 YDNRYLWMRQKRIQGSHFANL----------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQG-NVAVLV 387 (398)
T ss_pred cCHHHHhhcccEEEccccCcH----------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCc-eEEEEe
Confidence 555666677877777654321 346778899999998865 46899999999999999999998 999874
No 52
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.1e-39 Score=302.76 Aligned_cols=312 Identities=27% Similarity=0.373 Sum_probs=265.0
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++ +.. +++.+++.|.+.++||+||+.++++|++|.....|..+...+.|..+|||++|+|+++|+++..+
T Consensus 1 m~a~~~~~~~-~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~ 78 (341)
T cd08297 1 MKAAVVEEFG-EKP-YEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGL 78 (341)
T ss_pred CceEEeeccC-CCC-ceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCC
Confidence 7899998777 222 88999999999999999999999999999998888765433457789999999999999999999
Q ss_pred CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
++||+|++.+. ..|+|++|+.++++.++++|+++++.+++.++..+.|||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~ 158 (341)
T cd08297 79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158 (341)
T ss_pred CCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence 99999987520 148899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCC
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANL 259 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~ 259 (378)
.. .+++++++|||+|+++++|++++++|+++|++|++++ .++++.+.++++|+++++++.+. +...+.+.+++.
T Consensus 159 ~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08297 159 KK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAID----VGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGG 233 (341)
T ss_pred Hh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCC
Confidence 77 5899999999999988899999999999999999998 57788888899999999988764 346677777665
Q ss_pred CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064 260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338 (378)
Q Consensus 260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (378)
+ +|+++|+.+. .....++++++++|+++.+|.......+++...+..+++++.+.... ..+.++++++
T Consensus 234 ~-vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 302 (341)
T cd08297 234 G-AHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG----------TRQDLQEALE 302 (341)
T ss_pred C-CCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC----------CHHHHHHHHH
Confidence 5 9999997664 66688999999999999998654333345555566788888875432 1366888999
Q ss_pred HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++++.+++.++.|++++++++++.+..++..| |+|+++
T Consensus 303 ~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvi~~ 341 (341)
T cd08297 303 FAARGKVKPHIQVVPLEDLNEVFEKMEEGKIAG-RVVVDF 341 (341)
T ss_pred HHHcCCCcceeEEEcHHHHHHHHHHHHcCCccc-eEEEeC
Confidence 999999987777899999999999999999888 999975
No 53
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.1e-39 Score=306.36 Aligned_cols=311 Identities=25% Similarity=0.341 Sum_probs=258.8
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
+||++++..++.+ +++++.+.|.+.++||+|||.++++|++|+....|.++. .+|.++|||++|+|+++|+++.+
T Consensus 2 ~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08278 2 KTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTG 76 (365)
T ss_pred ccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCccc
Confidence 6899999886654 778899999999999999999999999999999887652 46889999999999999999999
Q ss_pred CCCCCEEeeCC------------------------------------------------CCCcccccceeccCCceEEcC
Q 017064 127 LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHKVS 158 (378)
Q Consensus 127 ~~~Gd~V~~~~------------------------------------------------~~~G~~~~~~~~~~~~~~~iP 158 (378)
+++||+|++.. ...|+|++|+++++++++++|
T Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 77 LKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 99999998521 013789999999999999999
Q ss_pred CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC
Q 017064 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA 238 (378)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga 238 (378)
+++++++++.+++++.|||+++...+.+++|++|||+|+ |++|++++|+|+++|++++++++ .++++.+.++++|+
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~---~~~~k~~~~~~~g~ 232 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVD---IVDSRLELAKELGA 232 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHcCC
Confidence 999999999999999999999988889999999999976 99999999999999996444443 47888889999999
Q ss_pred cEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCC-CCCccccchhhhhcCceEEEE
Q 017064 239 DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGF 315 (378)
Q Consensus 239 ~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 315 (378)
+.++++++.+ .+.+.+.+ +.+ +|+++||+|. ..+..++++++++|+++.+|... .....++...++.+++++.++
T Consensus 233 ~~~i~~~~~~~~~~v~~~~-~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T cd08278 233 THVINPKEEDLVAAIREIT-GGG-VDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV 310 (365)
T ss_pred cEEecCCCcCHHHHHHHHh-CCC-CcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence 9999887654 45677777 545 9999999986 56689999999999999998543 223445656666789999887
Q ss_pred echhhhccccHHHHHHHHHHHHHHHHcCCccc--cceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKY--DMELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
..... . ..+.+++++++++++.+++ .+..|+++++++|++.+.+++.. |+||+
T Consensus 311 ~~~~~----~---~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~--k~~~~ 365 (365)
T cd08278 311 IEGDS----V---PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI--KPVLR 365 (365)
T ss_pred ecCCc----C---hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce--EEEEC
Confidence 64321 1 1356788899999999865 24679999999999999877653 88875
No 54
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3.4e-39 Score=300.27 Aligned_cols=315 Identities=23% Similarity=0.260 Sum_probs=259.2
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
|++++...+.+. +++++++|.|.+++++|+|||.++++|++|+..+.|.++.....|..+|||++|+|+. .++..|+
T Consensus 1 ~a~~~~~~~~~~-~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 1 KALVVEKEDGKV-SAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred CeEEEccCCCCc-ceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCC
Confidence 577888877765 4899999999999999999999999999999988887643334688899999999998 5677899
Q ss_pred CCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHh--ccCCCC-EEEEeCCCch
Q 017064 129 PGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT--TLNSGD-SIVQNGATSI 200 (378)
Q Consensus 129 ~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~~g~-~VlV~g~~g~ 200 (378)
+||+|++... ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.... .+.+|+ +|+|+|++|.
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~ 157 (323)
T TIGR02823 78 EGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGG 157 (323)
T ss_pred CCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcH
Confidence 9999998751 2589999999999999999999999999999999999988875443 388898 9999999999
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHh
Q 017064 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280 (378)
Q Consensus 201 ~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~ 280 (378)
+|++++++|+++|+++++++ .++++.+.++++|++++++.++... .++.+.++ ++|+++||+|+..+..++++
T Consensus 158 vg~~~~~la~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~d~vld~~g~~~~~~~~~~ 230 (323)
T TIGR02823 158 VGSLAVAILSKLGYEVVAST----GKAEEEDYLKELGASEVIDREDLSP-PGKPLEKE--RWAGAVDTVGGHTLANVLAQ 230 (323)
T ss_pred HHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHhcCCcEEEccccHHH-HHHHhcCC--CceEEEECccHHHHHHHHHH
Confidence 99999999999999999888 4677778889999999988765332 34444444 39999999999888999999
Q ss_pred cccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHHH
Q 017064 281 LSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTA 360 (378)
Q Consensus 281 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~a 360 (378)
++++|+++.+|.......+.+...++.+++++.+...... ........++.+.+++..+.++..++.|+++++++|
T Consensus 231 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a 306 (323)
T TIGR02823 231 LKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYC----PMALREAAWQRLATDLKPRNLESITREITLEELPEA 306 (323)
T ss_pred hCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecccc----CchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHH
Confidence 9999999999965433333444556678999998764321 112334567778888888888766678999999999
Q ss_pred HHHHHccCCCCCceEeeC
Q 017064 361 LSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 361 ~~~~~~~~~~g~kvvv~~ 378 (378)
++.+.+++..+ |+|+++
T Consensus 307 ~~~~~~~~~~~-k~vv~~ 323 (323)
T TIGR02823 307 LEQILAGQHRG-RTVVDV 323 (323)
T ss_pred HHHHhCCCccc-eEEEeC
Confidence 99999999988 999874
No 55
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3.8e-39 Score=300.29 Aligned_cols=317 Identities=21% Similarity=0.236 Sum_probs=250.6
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++++. ++.+++.+.|.++++||+||+.++++|++|.....+.......+|.++|||++|+|++.| +..+
T Consensus 1 ~~a~~~~~~~~~~-~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~ 77 (326)
T cd08289 1 FQALVVEKDEDDV-SVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRF 77 (326)
T ss_pred CeeEEEeccCCcc-eeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCC
Confidence 6899999887754 488999999999999999999999999999876543221122457899999999999954 5789
Q ss_pred CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhc---cCCCCEEEEeCCCc
Q 017064 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVQNGATS 199 (378)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VlV~g~~g 199 (378)
++||+|++... ..|+|++|+.++++.++++|+++++++++.+++++.|||+++....+ ...+++|||+|++|
T Consensus 78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (326)
T cd08289 78 KPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATG 157 (326)
T ss_pred CCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCc
Confidence 99999998751 25899999999999999999999999999999999999988865332 34578999999999
Q ss_pred hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279 (378)
Q Consensus 200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~ 279 (378)
++|++++|+|+++|++|++++ .++++.+.++++|++++++.++...+.+.+.. +. ++|++|||+|+..+..+++
T Consensus 158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~-~~d~vld~~g~~~~~~~~~ 231 (326)
T cd08289 158 GVGSLAVSILAKLGYEVVAST----GKADAADYLKKLGAKEVIPREELQEESIKPLE-KQ-RWAGAVDPVGGKTLAYLLS 231 (326)
T ss_pred hHHHHHHHHHHHCCCeEEEEe----cCHHHHHHHHHcCCCEEEcchhHHHHHHHhhc-cC-CcCEEEECCcHHHHHHHHH
Confidence 999999999999999999888 47888999999999999987765444555553 33 4999999999988899999
Q ss_pred hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC-CccccceeeccccHH
Q 017064 280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG-KLKYDMELVPFNNFQ 358 (378)
Q Consensus 280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~~~~~~~~~l~~~~ 358 (378)
+++++|+++.+|.......+.++..++.+++++.++..... ......+.+..+...+... ......+.|++++++
T Consensus 232 ~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 307 (326)
T cd08289 232 TLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVEC----PMELRRRIWRRLATDLKPTQLLNEIKQEITLDELP 307 (326)
T ss_pred HhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEec----CchHHHHHHHHHHhhcCccccccccceEeeHHHHH
Confidence 99999999999965433344445666689999999753211 0111223444444444322 222346789999999
Q ss_pred HHHHHHHccCCCCCceEeeC
Q 017064 359 TALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 359 ~a~~~~~~~~~~g~kvvv~~ 378 (378)
+||+.+.+++..| |+|+++
T Consensus 308 ~a~~~~~~~~~~g-kvvv~~ 326 (326)
T cd08289 308 EALKQILQGRVTG-RTVVKL 326 (326)
T ss_pred HHHHHHhcCcccc-eEEEeC
Confidence 9999999999998 999874
No 56
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=4.8e-39 Score=305.93 Aligned_cols=308 Identities=22% Similarity=0.238 Sum_probs=256.0
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
|+++++.+++. +++.+++.|.+ ++++|+||+.++++|++|...+.|.++.. ++|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~ 75 (386)
T cd08283 1 MKALVWHGKGD----VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRN 75 (386)
T ss_pred CeeEEEecCCC----ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCC
Confidence 68899886543 88999999988 59999999999999999999999877653 56889999999999999999999
Q ss_pred CCCCCEEeeCCC----------------------------------------------CCcccccceeccCC--ceEEcC
Q 017064 127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQS--VWHKVS 158 (378)
Q Consensus 127 ~~~Gd~V~~~~~----------------------------------------------~~G~~~~~~~~~~~--~~~~iP 158 (378)
+++||+|++.+. ..|+|++|++++.+ .++++|
T Consensus 76 ~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 76 LKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECC
Confidence 999999987531 14889999999988 899999
Q ss_pred CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCC
Q 017064 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG 237 (378)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g 237 (378)
++++++++++++..++|||+++ ..+.+.+|++|||+|+ |.+|++++++|+++|+. ++++. .++++.+.+++++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~----~~~~~~~~~~~~~ 229 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAID----RVPERLEMARSHL 229 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcC
Confidence 9999999999999999999999 6689999999999976 99999999999999985 77776 4788999999885
Q ss_pred CcEEEccCcc--cHHHHHHHhcCCCCCcEEEeCCCCc----------------------cHHHHHHhcccCCEEEEEecC
Q 017064 238 ADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGN----------------------SASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 238 a~~vi~~~~~--~~~~i~~~~~~~g~~Dvvid~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~ 293 (378)
...++++... ..+.+++++++.+ +|++|||+|+. .+..++++++++|+++.+|..
T Consensus 230 ~~~vi~~~~~~~~~~~l~~~~~~~~-~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~ 308 (386)
T cd08283 230 GAETINFEEVDDVVEALRELTGGRG-PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVY 308 (386)
T ss_pred CcEEEcCCcchHHHHHHHHHcCCCC-CCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCC
Confidence 4567776654 3456777777666 99999999853 457889999999999999865
Q ss_pred CCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCC-
Q 017064 294 SKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHG- 369 (378)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~- 369 (378)
......++....+.+++++.+.... ..+.++++++++.++.+.+. .+.|+++++++|++.+.+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~ 378 (386)
T cd08283 309 GGTVNKFPIGAAMNKGLTLRMGQTH----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDG 378 (386)
T ss_pred CCCcCccCHHHHHhCCcEEEeccCC----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCC
Confidence 4433334544567889998886421 23567888999999998863 467999999999999988874
Q ss_pred CCCceEeeC
Q 017064 370 SQPKQVIKF 378 (378)
Q Consensus 370 ~g~kvvv~~ 378 (378)
.+ |+||+.
T Consensus 379 ~~-k~~~~~ 386 (386)
T cd08283 379 CI-KVVLKP 386 (386)
T ss_pred eE-EEEecC
Confidence 45 999874
No 57
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.3e-40 Score=301.66 Aligned_cols=322 Identities=27% Similarity=0.343 Sum_probs=248.2
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC---CCCccCCCc---eeEEEEEec
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---KVPAVGGYE---GVGEVYSVG 121 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e---~~G~V~~vG 121 (378)
+....+..+.+..++...++.+.|.+.+++++|++.++++|+.|+.+..|.+...+ .+|.+++++ .+|.+...|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g 84 (347)
T KOG1198|consen 5 IRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVG 84 (347)
T ss_pred cceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccc
Confidence 34555555555555577788999999999999999999999999999999887765 677444444 445555556
Q ss_pred -CCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHh------ccCCCCEEEE
Q 017064 122 -SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT------TLNSGDSIVQ 194 (378)
Q Consensus 122 -~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g~~VlV 194 (378)
..+..+..||.+..... .|+|+||.++|...++++|+++++.+||++|++++|||.++.+.+ ++++|++|||
T Consensus 85 ~~~~~~~~~g~~~~~~~~-~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv 163 (347)
T KOG1198|consen 85 DDVVGGWVHGDAVVAFLS-SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV 163 (347)
T ss_pred cccccceEeeeEEeeccC-CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE
Confidence 44556888888777665 599999999999999999999999999999999999999999988 8999999999
Q ss_pred eCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCcc
Q 017064 195 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNS 273 (378)
Q Consensus 195 ~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~ 273 (378)
+||+|++|++|+|+|++.|+.+++++ .++++.++++++|+|+++|+++.+. +.+++.+ +. ++|+||||+|+..
T Consensus 164 ~ggsggVG~~aiQlAk~~~~~~v~t~----~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~-~~DvVlD~vg~~~ 237 (347)
T KOG1198|consen 164 LGGSGGVGTAAIQLAKHAGAIKVVTA----CSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GK-GVDVVLDCVGGST 237 (347)
T ss_pred EeCCcHHHHHHHHHHHhcCCcEEEEE----cccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CC-CccEEEECCCCCc
Confidence 99999999999999999995444444 3888999999999999999999764 5677777 44 4999999999998
Q ss_pred HHHHHHhcccCCEEEEEecCCCCCccccchhhh--hcCceEEE--EechhhhccccHHHHHHHHHHHHHHHHcCCccccc
Q 017064 274 ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFI--FKDLSLKG--FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM 349 (378)
Q Consensus 274 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 349 (378)
...+..++..+|+...++.......+....... .+.+.+.. ....++ .........+.++.+.++++.|++++.+
T Consensus 238 ~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~ie~gkikp~i 316 (347)
T KOG1198|consen 238 LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNY-RWLYFVPSAEYLKALVELIEKGKIKPVI 316 (347)
T ss_pred cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccce-eeeeecCCHHHHHHHHHHHHcCcccCCc
Confidence 888888999888765665333222111111000 11111111 111111 1112233457788999999999999986
Q ss_pred -eeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 350 -ELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 350 -~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+.||++++.+|++++.+++..| |+++++
T Consensus 317 ~~~~p~~~~~ea~~~~~~~~~~G-K~vl~~ 345 (347)
T KOG1198|consen 317 DSVYPFSQAKEAFEKLEKSHATG-KVVLEK 345 (347)
T ss_pred ceeeeHHHHHHHHHHHhhcCCcc-eEEEEe
Confidence 4799999999999999999999 999874
No 58
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=9.4e-39 Score=298.01 Aligned_cols=313 Identities=27% Similarity=0.349 Sum_probs=261.9
Q ss_pred ccceEEEcccCC--CccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCC
Q 017064 47 PSKAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (378)
Q Consensus 47 ~~~a~~~~~~~~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v 124 (378)
.||++++..+++ +. .+++++.+.|.+.++||+|||.++|+|++|+....|.++....+|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 1 SFRKLVVHRLSPNFRE-ATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred CceEEEeccCCCCccc-CceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCC
Confidence 379999998877 44 488999999999999999999999999999998888765444578899999999999999999
Q ss_pred CCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064 125 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 204 (378)
Q Consensus 125 ~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~ 204 (378)
+.+++||+|++... |+|++|++++.+.++++|++ +.+++.+++++.|||+++.....+.+|++|+|+|++|.+|++
T Consensus 80 ~~~~~Gd~V~~~~~--g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~ 155 (329)
T cd08250 80 TDFKVGDAVATMSF--GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQF 155 (329)
T ss_pred CCCCCCCEEEEecC--cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHH
Confidence 99999999998754 89999999999999999997 356788888999999999887889999999999999999999
Q ss_pred HHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283 (378)
Q Consensus 205 av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~ 283 (378)
++++|++.|+++++++ .++++.+.++++|++.+++.+.... ..+....+ .+ +|++||++|+.....+++++++
T Consensus 156 ~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~-vd~v~~~~g~~~~~~~~~~l~~ 229 (329)
T cd08250 156 AVQLAKLAGCHVIGTC----SSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KG-VDVVYESVGGEMFDTCVDNLAL 229 (329)
T ss_pred HHHHHHHcCCeEEEEe----CcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CC-CeEEEECCcHHHHHHHHHHhcc
Confidence 9999999999999888 4677888889999999987766543 34444443 34 9999999998888899999999
Q ss_pred CCEEEEEecCCCCC----------ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ce
Q 017064 284 GGTMVTYGGMSKKP----------ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---ME 350 (378)
Q Consensus 284 ~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~ 350 (378)
+|+++.+|...... ..+ ....+.+++++.++....+. ....+.+.+++++++++.+++. .+
T Consensus 230 ~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~ 303 (329)
T cd08250 230 KGRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYA-----KLIPQHLDRLLQLYQRGKLVCEVDPTR 303 (329)
T ss_pred CCeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHH-----HHHHHHHHHHHHHHHCCCeeeeECCcc
Confidence 99999998654321 111 23456788999998764331 1245678889999999998873 34
Q ss_pred eeccccHHHHHHHHHccCCCCCceEee
Q 017064 351 LVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 351 ~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.|+++++++|++.+.+++..+ |+|++
T Consensus 304 ~~~~~~~~~a~~~~~~~~~~~-kvvv~ 329 (329)
T cd08250 304 FRGLESVADAVDYLYSGKNIG-KVVVE 329 (329)
T ss_pred ccCHHHHHHHHHHHHcCCCCc-eEEeC
Confidence 699999999999999988888 99875
No 59
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.5e-39 Score=302.22 Aligned_cols=309 Identities=22% Similarity=0.233 Sum_probs=251.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.++++ +.+.+.+.|.+.++||+|||.++++|++|+..+.+.++. ...|.++|||++|+|+++|++++++
T Consensus 1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~ 75 (351)
T cd08285 1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDF 75 (351)
T ss_pred CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCcc
Confidence 78999988775 678899989999999999999999999999988776543 2458899999999999999999999
Q ss_pred CCCCEEeeCCC-----------------------------CCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHHH
Q 017064 128 APGDWVIPSPP-----------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTA 176 (378)
Q Consensus 128 ~~Gd~V~~~~~-----------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ta 176 (378)
++||+|++.+. ..|+|++|++++.+ .++++|+++++++++.++..++||
T Consensus 76 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta 155 (351)
T cd08285 76 KPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG 155 (351)
T ss_pred CCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence 99999997431 24899999999974 899999999999999999999999
Q ss_pred HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHH
Q 017064 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG 254 (378)
Q Consensus 177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~ 254 (378)
|+++ ..+.+++|++|||+|+ |++|++++|+|+++|++ ++++. .++++.+.++++|+++++++.+.+ .+.+.+
T Consensus 156 ~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~ 229 (351)
T cd08285 156 FHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVG----SRPNRVELAKEYGATDIVDYKNGDVVEQILK 229 (351)
T ss_pred HHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCceEecCCCCCHHHHHHH
Confidence 9997 4588999999999975 99999999999999996 55554 467888999999999999887644 456777
Q ss_pred HhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCC-Cccccc--hhhhhcCceEEEEechhhhccccHHHHH
Q 017064 255 LLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK-PITVST--SAFIFKDLSLKGFWLQKWLSSEKATECR 330 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (378)
++++.+ +|+++||+|+ ..+..++++++++|+++.+|..... ...++. .....+..++.+..... ..
T Consensus 230 ~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~ 299 (351)
T cd08285 230 LTGGKG-VDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG---------GR 299 (351)
T ss_pred HhCCCC-CcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC---------cc
Confidence 776655 9999999997 4668999999999999999865432 122221 11223455555443210 12
Q ss_pred HHHHHHHHHHHcCCccc---cce-eeccccHHHHHHHHHccCC-CCCceEeeC
Q 017064 331 NMIDYLLCLAREGKLKY---DME-LVPFNNFQTALSKALGLHG-SQPKQVIKF 378 (378)
Q Consensus 331 ~~~~~~~~~l~~g~~~~---~~~-~~~l~~~~~a~~~~~~~~~-~g~kvvv~~ 378 (378)
+.++++++++++|++++ .++ .|+++++++|++.+++++. .+ |++|++
T Consensus 300 ~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~-k~~~~~ 351 (351)
T cd08285 300 LRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLI-KPVIIF 351 (351)
T ss_pred ccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeE-EEEEeC
Confidence 55788899999999998 233 5999999999999999885 45 999875
No 60
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=6.2e-39 Score=303.59 Aligned_cols=309 Identities=22% Similarity=0.299 Sum_probs=260.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC-
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR- 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~- 126 (378)
||++++..++.+ +.+.+.|.|.+.++||+|++.++++|++|+....+.++. .+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~ 75 (367)
T cd08263 1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENP 75 (367)
T ss_pred CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCC
Confidence 689999888654 778889999999999999999999999999988886654 46789999999999999999988
Q ss_pred --CCCCCEEeeCC------------------------------------------------CCCcccccceeccCCceEE
Q 017064 127 --LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHK 156 (378)
Q Consensus 127 --~~~Gd~V~~~~------------------------------------------------~~~G~~~~~~~~~~~~~~~ 156 (378)
|++||+|++.+ ...|+|++|+.++.+.+++
T Consensus 76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (367)
T cd08263 76 YGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAP 155 (367)
T ss_pred CcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEE
Confidence 99999999831 1248899999999999999
Q ss_pred cCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHh
Q 017064 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG 235 (378)
Q Consensus 157 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~ 235 (378)
+|+++++.+++.++++++|||+++.+.+.+.++++|||+| +|++|++++++|+++|++ ++++. .++++.+.+++
T Consensus 156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~----~s~~~~~~~~~ 230 (367)
T cd08263 156 LPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVD----VRDEKLAKAKE 230 (367)
T ss_pred CCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHH
Confidence 9999999999999999999999998888889999999996 599999999999999998 76666 47788888899
Q ss_pred CCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceE
Q 017064 236 LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSL 312 (378)
Q Consensus 236 ~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~ 312 (378)
+|++.+++.+..+ ...+++..++.+ +|++||++++. ....++++++++|+++.++..... ...++...++.+++++
T Consensus 231 ~g~~~v~~~~~~~~~~~l~~~~~~~~-~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 309 (367)
T cd08263 231 LGATHTVNAAKEDAVAAIREITGGRG-VDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKI 309 (367)
T ss_pred hCCceEecCCcccHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEE
Confidence 9999999887644 456777776665 99999999997 778999999999999999854321 2334445555788888
Q ss_pred EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.++... . ..+.++++++++.++.+++. ++.|+++++.++++.+.+++..| |+||+
T Consensus 310 ~~~~~~------~---~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g-~~~~~ 367 (367)
T cd08263 310 IGSYGA------R---PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHG-RAIVE 367 (367)
T ss_pred EecCCC------C---cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccc-eeeeC
Confidence 774321 1 13568889999999998863 46799999999999999999888 99874
No 61
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.1e-38 Score=292.41 Aligned_cols=302 Identities=25% Similarity=0.334 Sum_probs=253.4
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.+.+ +.. +++.+.+.|.++++||+||+.++++|+.|.....+. ..|.++|||++|+|+++|+++..|
T Consensus 1 ~~~~~~~~~~-~~~-~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDA-PLR-LRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCC-Cce-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCC
Confidence 5888887765 443 888899999999999999999999999999876521 235789999999999999999999
Q ss_pred CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (378)
Q Consensus 128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~ 207 (378)
++||+|+++.. .|+|++|++++.++++++|+++++++++++++.+.|||+++...... +|++|+|+|++|++|+++++
T Consensus 74 ~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~ 151 (305)
T cd08270 74 AVGARVVGLGA-MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQ 151 (305)
T ss_pred CCCCEEEEecC-CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHH
Confidence 99999998753 48999999999999999999999999999999999999999876555 59999999999999999999
Q ss_pred HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEE
Q 017064 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTM 287 (378)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~ 287 (378)
+|++.|++++.++ .++++.+.++++|++.+++... ++.++ ++|+++|++|+.....++++++++|++
T Consensus 152 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~-------~~~~~--~~d~vl~~~g~~~~~~~~~~l~~~G~~ 218 (305)
T cd08270 152 LAALAGAHVVAVV----GSPARAEGLRELGAAEVVVGGS-------ELSGA--PVDLVVDSVGGPQLARALELLAPGGTV 218 (305)
T ss_pred HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEeccc-------cccCC--CceEEEECCCcHHHHHHHHHhcCCCEE
Confidence 9999999999888 4688899999999987664332 12222 499999999998889999999999999
Q ss_pred EEEecCCCCCccccchhhhh--cCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHH
Q 017064 288 VTYGGMSKKPITVSTSAFIF--KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKA 364 (378)
Q Consensus 288 v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~ 364 (378)
+.+|........++...+.. +++++.++.+.. +....+.++.++++++++++++. .+.+++++++++++.+
T Consensus 219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~ 292 (305)
T cd08270 219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD------GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEAL 292 (305)
T ss_pred EEEeccCCCcccccHHHHhcccccceEEEEEccC------HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHH
Confidence 99996543233344444444 688888887542 23445778899999999999875 4679999999999999
Q ss_pred HccCCCCCceEeeC
Q 017064 365 LGLHGSQPKQVIKF 378 (378)
Q Consensus 365 ~~~~~~g~kvvv~~ 378 (378)
.+++..| |+|+++
T Consensus 293 ~~~~~~g-kvvi~~ 305 (305)
T cd08270 293 LARRFRG-KAVLDV 305 (305)
T ss_pred HcCCCCc-eEEEeC
Confidence 9999898 999875
No 62
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.7e-38 Score=298.51 Aligned_cols=308 Identities=26% Similarity=0.288 Sum_probs=254.5
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
||++.+.+++. +.+.+.|.|.+ .+++|+|||.++++|++|+....|.++. .++|.++|+|++|+|+++|+++++
T Consensus 1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 75 (347)
T cd05278 1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKR 75 (347)
T ss_pred CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccc
Confidence 68888887665 78889999989 9999999999999999999998887764 356889999999999999999999
Q ss_pred CCCCCEEeeCC-----------------------------CCCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHH
Q 017064 127 LAPGDWVIPSP-----------------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT 175 (378)
Q Consensus 127 ~~~Gd~V~~~~-----------------------------~~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~t 175 (378)
+++||+|++.+ ...|+|++|++++++ +++++|+++++++++.++++++|
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t 155 (347)
T cd05278 76 LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT 155 (347)
T ss_pred cCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence 99999999732 124899999999997 89999999999999999999999
Q ss_pred HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHH
Q 017064 176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK 253 (378)
Q Consensus 176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~ 253 (378)
||+++ ...++++|++|||.|+ |++|++++|+|+++|+ +++++. .++++.+.++++|++++++++..+ .+.++
T Consensus 156 a~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~ 229 (347)
T cd05278 156 GFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVD----SNPERLDLAKEAGATDIINPKNGDIVEQIL 229 (347)
T ss_pred eeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHHHHhCCcEEEcCCcchHHHHHH
Confidence 99998 5688999999999875 9999999999999997 676664 467788888999999999887654 45577
Q ss_pred HHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHH
Q 017064 254 GLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM 332 (378)
Q Consensus 254 ~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (378)
+.+++.+ +|++||++|+ ..+..++++++++|+++.+|..............+.+++++.+.... ..+.
T Consensus 230 ~~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 298 (347)
T cd05278 230 ELTGGRG-VDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP----------VRAR 298 (347)
T ss_pred HHcCCCC-CcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccC----------chhH
Confidence 7776655 9999999998 57789999999999999998543321111222344677777775321 1457
Q ss_pred HHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCC-CCCceEeeC
Q 017064 333 IDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHG-SQPKQVIKF 378 (378)
Q Consensus 333 ~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~-~g~kvvv~~ 378 (378)
++++++++.++.+++. ...|++++++++++.+..++. .+ |+|+++
T Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~vv~~ 347 (347)
T cd05278 299 MPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCI-KVVIRP 347 (347)
T ss_pred HHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCce-EEEecC
Confidence 8889999999999863 467999999999999988877 66 999864
No 63
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.5e-38 Score=297.63 Aligned_cols=309 Identities=25% Similarity=0.313 Sum_probs=257.4
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC-----------CCCCCccCCCceeEE
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPAVGGYEGVGE 116 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~ 116 (378)
||++++..++.+ +++.+.|.|++.++||+||+.++++|++|+..+.|.++. ..+.|.++|||++|+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 77 (350)
T cd08240 1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE 77 (350)
T ss_pred CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence 688888877764 778899999999999999999999999999998875432 123567899999999
Q ss_pred EEEecCCCCCCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhcc
Q 017064 117 VYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (378)
Q Consensus 117 V~~vG~~v~~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~ 170 (378)
|+++|++++.+++||+|++.+. ..|++++|+.++.+.++++|+++++.++++++
T Consensus 78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~ 157 (350)
T cd08240 78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA 157 (350)
T ss_pred EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence 9999999999999999998731 24899999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-
Q 017064 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE- 248 (378)
Q Consensus 171 ~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~- 248 (378)
+.++|||+++.....+.++++|+|+|+ |++|++++|+|++.|+ +|+++. .++++.+.++++|++.+++.++..
T Consensus 158 ~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (350)
T cd08240 158 CSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVD----IDEAKLEAAKAAGADVVVNGSDPDA 232 (350)
T ss_pred chhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCcEEecCCCccH
Confidence 999999999988777778999999975 9999999999999999 566665 478888899999999988876643
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHH
Q 017064 249 VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKAT 327 (378)
Q Consensus 249 ~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (378)
...+.+..++ + +|++||++|. .....++++++++|+++.+|..... ...+......+++++.++.....
T Consensus 233 ~~~~~~~~~~-~-~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~------- 302 (350)
T cd08240 233 AKRIIKAAGG-G-VDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL------- 302 (350)
T ss_pred HHHHHHHhCC-C-CcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH-------
Confidence 3556666666 4 9999999985 5678999999999999999855432 22333344558888887754321
Q ss_pred HHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 328 ECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 328 ~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+.+..++++++++.+++. +..|+++++++|++.+.+++..| |+++++
T Consensus 303 ---~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvv~~ 350 (350)
T cd08240 303 ---EELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVG-RAVLKP 350 (350)
T ss_pred ---HHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccc-eEEecC
Confidence 557788899999998864 56799999999999999999888 999863
No 64
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.9e-38 Score=295.63 Aligned_cols=302 Identities=23% Similarity=0.289 Sum_probs=253.9
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
|++....++.. +++.+.+.|+++++||+|||.++++|++|+....|.... .++|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (337)
T cd05283 1 KGYAARDASGK---LEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFK 76 (337)
T ss_pred CceEEecCCCC---ceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccC
Confidence 35666666643 899999999999999999999999999999998887643 24688999999999999999999999
Q ss_pred CCCEEeeC----------------------------------CCCCcccccceeccCCceEEcCCCCCHhhhhhccccHH
Q 017064 129 PGDWVIPS----------------------------------PPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174 (378)
Q Consensus 129 ~Gd~V~~~----------------------------------~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ 174 (378)
+||+|+.. ....|+|++|+.++.++++++|+++++++++.+.+.+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ 156 (337)
T cd05283 77 VGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGI 156 (337)
T ss_pred CCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHH
Confidence 99999731 02258999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (378)
Q Consensus 175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~ 254 (378)
+||+++.+ ..+.+|++++|.|+ |++|++++++|++.|++++++. .++++.+.++++|++.+++...... ...
T Consensus 157 ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~--~~~ 228 (337)
T cd05283 157 TVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFS----RSPSKKEDALKLGADEFIATKDPEA--MKK 228 (337)
T ss_pred HHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEecCcchhh--hhh
Confidence 99999877 56899999999875 9999999999999999988887 4677888889999999987765332 111
Q ss_pred HhcCCCCCcEEEeCCCCcc-HHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHH
Q 017064 255 LLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI 333 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (378)
. +. ++|++|||+|... ...++++++++|+++.+|.... ...++...++.+++++.++.... .+.+
T Consensus 229 -~-~~-~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~----------~~~~ 294 (337)
T cd05283 229 -A-AG-SLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG----------RKET 294 (337)
T ss_pred -c-cC-CceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC-CCccCHHHHhcCceEEEEecccC----------HHHH
Confidence 1 22 4999999999874 7899999999999999996543 22456666677999999986542 2457
Q ss_pred HHHHHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 334 DYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 334 ~~~~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
+.+++++.++.+++.++.|+++++++||+.+.+++..| |+|++
T Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-k~v~~ 337 (337)
T cd05283 295 QEMLDFAAEHGIKPWVEVIPMDGINEALERLEKGDVRY-RFVLD 337 (337)
T ss_pred HHHHHHHHhCCCccceEEEEHHHHHHHHHHHHcCCCcc-eEeeC
Confidence 78889999999987778899999999999999999988 99874
No 65
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3e-38 Score=295.85 Aligned_cols=304 Identities=22% Similarity=0.244 Sum_probs=244.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++. +.+.+.+.|.++++||+||+.++++|++|+..+.|..+.. ++|.++|||++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~ 75 (339)
T PRK10083 1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAA 75 (339)
T ss_pred CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccC
Confidence 68888887664 8899999999999999999999999999999988876542 468999999999999999999999
Q ss_pred CCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|+..+ ...|+|++|+.++.++++++|+++++++++ +...+.++|+ +.
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~ 153 (339)
T PRK10083 76 RIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VT 153 (339)
T ss_pred CCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HH
Confidence 9999998421 114899999999999999999999998876 4456777885 44
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL 259 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~ 259 (378)
...++++|++|+|+|+ |++|++++|+|++ +|++++++++ .++++.+.++++|+++++++++... +.+.. .+.
T Consensus 154 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~---~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~ 227 (339)
T PRK10083 154 GRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVAD---RIDERLALAKESGADWVINNAQEPLGEALEE--KGI 227 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEc---CCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCC
Confidence 5588999999999995 9999999999996 6998666554 4788899999999999998876433 23322 122
Q ss_pred CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064 260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338 (378)
Q Consensus 260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (378)
+ +|++||++|. ..+..++++++++|+++.+|.... ...++...+..+++++.+... ..+.++++++
T Consensus 228 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 294 (339)
T PRK10083 228 K-PTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL-----------NANKFPVVID 294 (339)
T ss_pred C-CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEec-----------ChhhHHHHHH
Confidence 2 6899999996 467899999999999999986532 333344444557777776532 1246788999
Q ss_pred HHHcCCccc---cceeeccccHHHHHHHHHccC-CCCCceEeeC
Q 017064 339 LAREGKLKY---DMELVPFNNFQTALSKALGLH-GSQPKQVIKF 378 (378)
Q Consensus 339 ~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~-~~g~kvvv~~ 378 (378)
++++|.+++ ..+.|+++++++|++.+.+++ ..+ |+|++|
T Consensus 295 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~-kvvv~~ 337 (339)
T PRK10083 295 WLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCC-KVLLTF 337 (339)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceE-EEEEec
Confidence 999999987 357899999999999998654 456 999875
No 66
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=5.1e-38 Score=295.00 Aligned_cols=307 Identities=23% Similarity=0.287 Sum_probs=260.6
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++.+ +.+.+.+.|.+.+++|+||+.++++|++|+....|..+.. .+|.++|+|++|+|+.+|+++..+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~~~~~ 76 (345)
T cd08260 1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV-TLPHVPGHEFAGVVVEVGEDVSRW 76 (345)
T ss_pred CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC-CCCeeeccceeEEEEEECCCCccC
Confidence 799999887765 7888999999999999999999999999999988865532 457899999999999999999999
Q ss_pred CCCCEEee---------------------------CCCCCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHHHHH
Q 017064 128 APGDWVIP---------------------------SPPSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALR 178 (378)
Q Consensus 128 ~~Gd~V~~---------------------------~~~~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ta~~ 178 (378)
++||+|++ +. ..|+|++|+.++.. +++++|+++++++++.+++.++|||+
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~ 155 (345)
T cd08260 77 RVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFR 155 (345)
T ss_pred CCCCEEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHH
Confidence 99999986 21 15899999999975 89999999999999999999999999
Q ss_pred HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-c-cHHHHHHHh
Q 017064 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLL 256 (378)
Q Consensus 179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~-~~~~i~~~~ 256 (378)
++...+++.++++|+|+| +|++|++++++|+++|+++++++ .++++.+.++++|++++++.+. . ....+.++.
T Consensus 156 ~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 230 (345)
T cd08260 156 ALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVD----IDDDKLELARELGAVATVNASEVEDVAAAVRDLT 230 (345)
T ss_pred HHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHhCCCEEEccccchhHHHHHHHHh
Confidence 998778899999999999 59999999999999999999988 5788888889999999998876 3 345677777
Q ss_pred cCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCC--ccccchhhhhcCceEEEEechhhhccccHHHHHHHH
Q 017064 257 ANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI 333 (378)
Q Consensus 257 ~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (378)
.+ + +|++|||+|+ .....++++++++|+++.+|...... ..++...+..+++++.+.... ....+
T Consensus 231 ~~-~-~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 298 (345)
T cd08260 231 GG-G-AHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM----------PAHRY 298 (345)
T ss_pred CC-C-CCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC----------CHHHH
Confidence 76 5 9999999995 56688999999999999998654332 234445555788888886542 12467
Q ss_pred HHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 334 DYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 334 ~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
++++++++++.+.+. .+.++++++++|++.+++++..| |+|++
T Consensus 299 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~v~~ 344 (345)
T cd08260 299 DAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAG-ITVIT 344 (345)
T ss_pred HHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCc-eEEec
Confidence 788899999988763 46799999999999999999998 98874
No 67
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.5e-38 Score=291.34 Aligned_cols=309 Identities=24% Similarity=0.262 Sum_probs=254.5
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++.+...+.+.. +.+.+.+.|.++++||+||+.++++|+.|+....|..+.. ..|.++|||++|+|+++|. ..+
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~vG~--~~~ 76 (320)
T cd08243 1 MKAIVIEQPGGPEV-LKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV-KFPRVLGIEAVGEVEEAPG--GTF 76 (320)
T ss_pred CeEEEEcCCCCccc-eEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCccccceeEEEEEEecC--CCC
Confidence 57888877665433 7778888888999999999999999999999888765432 4578899999999999995 579
Q ss_pred CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHH
Q 017064 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202 (378)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G 202 (378)
++||+|++... ..|+|++|+.++++.++++|+++++++++.+++++.|||+++.....+.+|++|||+|++|++|
T Consensus 77 ~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g 156 (320)
T cd08243 77 TPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVG 156 (320)
T ss_pred CCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHH
Confidence 99999998752 2489999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282 (378)
Q Consensus 203 ~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~ 282 (378)
++++|+|+++|++|++++ .++++.+.++++|++++++......+.+++. +.+ +|+++||+|+..+..++++++
T Consensus 157 ~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~~-~d~vl~~~~~~~~~~~~~~l~ 229 (320)
T cd08243 157 LAALKLAKALGATVTATT----RSPERAALLKELGADEVVIDDGAIAEQLRAA--PGG-FDKVLELVGTATLKDSLRHLR 229 (320)
T ss_pred HHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEecCccHHHHHHHh--CCC-ceEEEECCChHHHHHHHHHhc
Confidence 999999999999999888 4778888899999999886543344566666 434 999999999988899999999
Q ss_pred cCCEEEEEecCCCCCc--cccchhh--hhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccH
Q 017064 283 QGGTMVTYGGMSKKPI--TVSTSAF--IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNF 357 (378)
Q Consensus 283 ~~G~~v~~g~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~ 357 (378)
++|+++.+|....... ....... +.+++++.++..... ....++.++++++.+.+++. +..|+++++
T Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 301 (320)
T cd08243 230 PGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV--------PQTPLQELFDFVAAGHLDIPPSKVFTFDEI 301 (320)
T ss_pred cCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh--------hHHHHHHHHHHHHCCceecccccEEcHHHH
Confidence 9999999985432211 1111222 357777777654322 23568888999999998864 568999999
Q ss_pred HHHHHHHHccCCCCCceEe
Q 017064 358 QTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 358 ~~a~~~~~~~~~~g~kvvv 376 (378)
++|++.+.+++..+ |+|+
T Consensus 302 ~~a~~~~~~~~~~~-kvvv 319 (320)
T cd08243 302 VEAHAYMESNRAFG-KVVV 319 (320)
T ss_pred HHHHHHHHhCCCCC-cEEe
Confidence 99999999888888 8876
No 68
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.8e-38 Score=297.68 Aligned_cols=309 Identities=27% Similarity=0.356 Sum_probs=258.4
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++.+ +++.+++.|.+++++|+|+|.++++|+.|+....|.++. .+|.++|+|++|+|+.+|+++..+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (363)
T cd08279 1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGV 75 (363)
T ss_pred CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCcccc
Confidence 689999988754 788999999999999999999999999999988887653 467899999999999999999999
Q ss_pred CCCCEEeeCC----------------------------------------------CCCcccccceeccCCceEEcCCCC
Q 017064 128 APGDWVIPSP----------------------------------------------PSSGTWQSYVVKDQSVWHKVSKDS 161 (378)
Q Consensus 128 ~~Gd~V~~~~----------------------------------------------~~~G~~~~~~~~~~~~~~~iP~~~ 161 (378)
++||+|++.+ ...|+|++|+.++++.++++|+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 76 KPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCC
Confidence 9999999842 124899999999999999999999
Q ss_pred CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcE
Q 017064 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADE 240 (378)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~ 240 (378)
++++++.+++++.+||+++....++.+|++|||+|+ |++|++++++|+++|++ +++++ .++++.+.++++|+++
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~----~~~~~~~~~~~~g~~~ 230 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVD----PVPEKLELARRFGATH 230 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHHHhCCeE
Confidence 999999999999999999988889999999999965 99999999999999997 77776 4778888889999999
Q ss_pred EEccCcc-cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEEec
Q 017064 241 VFTESQL-EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWL 317 (378)
Q Consensus 241 vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 317 (378)
+++.+.. ...++.+++.+.+ +|+++|++++ .....++++++++|+++.++.... ....++...+..++..+.++.+
T Consensus 231 vv~~~~~~~~~~l~~~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (363)
T cd08279 231 TVNASEDDAVEAVRDLTDGRG-ADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLY 309 (363)
T ss_pred EeCCCCccHHHHHHHHcCCCC-CCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEe
Confidence 9988764 3456777765555 9999999995 566899999999999999985442 2344555566667777777654
Q ss_pred hhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceE
Q 017064 318 QKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQV 375 (378)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvv 375 (378)
... ...+.+++++++++++.+++. .++|+++++++|++.+.+++..+ .++
T Consensus 310 ~~~-------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~ 362 (363)
T cd08279 310 GSA-------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENAR-GVI 362 (363)
T ss_pred cCc-------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCcee-EEe
Confidence 321 234678889999999998863 46799999999999999887764 443
No 69
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-38 Score=295.58 Aligned_cols=305 Identities=24% Similarity=0.308 Sum_probs=255.9
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
|+++++.+++++ +++++.+.|.+.++||+||+.++++|++|+....|..+.. ++|.++|||++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~ 76 (334)
T PRK13771 1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM-KYPVILGHEVVGTVEEVGENVKGF 76 (334)
T ss_pred CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC-CCCeeccccceEEEEEeCCCCccC
Confidence 689999888864 8899999999999999999999999999999888866532 457889999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.
T Consensus 77 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 77 KPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999998741 1488999999999999999999999999999999999999998
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
.. .+.++++|+|+|++|.+|++++++|+++|+++++++ .++++.+.++++ ++++++.+ ...+.+++. + +
T Consensus 157 ~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~----~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~--~--~ 225 (334)
T PRK13771 157 RA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT----SSESKAKIVSKY-ADYVIVGS-KFSEEVKKI--G--G 225 (334)
T ss_pred hc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHH-HHHhcCch-hHHHHHHhc--C--C
Confidence 75 899999999999999999999999999999998888 467788888888 77777665 333445553 2 3
Q ss_pred CcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCc-cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064 262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI-TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340 (378)
Q Consensus 262 ~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 340 (378)
+|+++||+|+.....++++++++|+++.+|....... .......+.+++++.+.... ..+.++++++++
T Consensus 226 ~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 295 (334)
T PRK13771 226 ADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA----------TKRDVEEALKLV 295 (334)
T ss_pred CcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC----------CHHHHHHHHHHH
Confidence 9999999999888999999999999999996533221 23333445688888876321 235678899999
Q ss_pred HcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 341 REGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 341 ~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++.+++. ++.|+++++++|++.+.+++..| |++++.
T Consensus 296 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~ 333 (334)
T PRK13771 296 AEGKIKPVIGAEVSLSEIDKALEELKDKSRIG-KILVKP 333 (334)
T ss_pred HcCCCcceEeeeEcHHHHHHHHHHHHcCCCcc-eEEEec
Confidence 99998865 46799999999999999988888 998863
No 70
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=5.4e-38 Score=297.26 Aligned_cols=310 Identities=22% Similarity=0.288 Sum_probs=249.0
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
+||+.++..++.+ +.+++.|.|.+.++||+|||.++|+|++|.+.+.|.++. .+|.++|||++|+|+++|++++.
T Consensus 7 ~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~ 81 (373)
T cd08299 7 KCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTT 81 (373)
T ss_pred eeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCcc
Confidence 4788888876654 788999999999999999999999999999999887632 46889999999999999999999
Q ss_pred CCCCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCC
Q 017064 127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK 159 (378)
Q Consensus 127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~ 159 (378)
+++||+|++.+. ..|+|++|++++.+.++++|+
T Consensus 82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 999999987520 148899999999999999999
Q ss_pred CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCC
Q 017064 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA 238 (378)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga 238 (378)
++++++++++++++.+||+++...+++++|++|+|+|+ |++|++++++|+++|+ +|+++. .++++++.++++|+
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~a~~lGa 236 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD----INKDKFAKAKELGA 236 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCC
Confidence 99999999999999999999887789999999999976 9999999999999999 688776 47888999999999
Q ss_pred cEEEccCcc---cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhc-ccCCEEEEEecCCCC-CccccchhhhhcCceE
Q 017064 239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFL-SQGGTMVTYGGMSKK-PITVSTSAFIFKDLSL 312 (378)
Q Consensus 239 ~~vi~~~~~---~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~ 312 (378)
+++++..+. ....+.+++++ ++|+++||+|+ ..+..++..+ +++|+++.+|..... ..++.+. .+.++.++
T Consensus 237 ~~~i~~~~~~~~~~~~v~~~~~~--~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 313 (373)
T cd08299 237 TECINPQDYKKPIQEVLTEMTDG--GVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTW 313 (373)
T ss_pred ceEecccccchhHHHHHHHHhCC--CCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeE
Confidence 999987653 23456666663 49999999996 4456666654 679999999965432 2333332 24467888
Q ss_pred EEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.++....+.. .+.+.++++.+.++.+++. ++.|+++++++|++.+.+++. . |+++++
T Consensus 314 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~-k~~~~~ 373 (373)
T cd08299 314 KGAVFGGWKS-------KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-I-RTVLTF 373 (373)
T ss_pred EEEEecCCcc-------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-c-eEEEeC
Confidence 8887654411 1334456666666655432 568999999999999887664 3 888874
No 71
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3.1e-38 Score=272.70 Aligned_cols=299 Identities=23% Similarity=0.284 Sum_probs=249.0
Q ss_pred eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEec--CCCCCCCCCCEEeeCCCCC
Q 017064 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG--SAVTRLAPGDWVIPSPPSS 140 (378)
Q Consensus 63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~ 140 (378)
|++++.++|.|++||||+|+.|.+++|.-...+...... -.|+-+|...+|.++... |+..+|++||.|.+.
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----
Confidence 899999999999999999999999999443333322211 357778877766555443 557789999999987
Q ss_pred cccccceeccCCceEEcCCCCC--HhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEE
Q 017064 141 GTWQSYVVKDQSVWHKVSKDSP--MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218 (378)
Q Consensus 141 G~~~~~~~~~~~~~~~iP~~~~--~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~ 218 (378)
.+|++|.+++.+.+.|++++.- ......+.++..|||.+|.+.+.+++|++|+|.+|+|++|..+.|+||..|++|+.
T Consensus 101 ~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVG 180 (340)
T COG2130 101 SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVG 180 (340)
T ss_pred ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEE
Confidence 4799999999999999986532 23344567789999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHHHHh-CCCcEEEccCcccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCC
Q 017064 219 IIRDRAGSDEAKEKLKG-LGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK 296 (378)
Q Consensus 219 ~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 296 (378)
++ +++||.+++++ +|+|.++|++.++. +.+++.++. ++|+.||++|++.++..+..|+.++|++.||..+.+
T Consensus 181 ia----Gg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~--GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~Y 254 (340)
T COG2130 181 IA----GGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPK--GIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQY 254 (340)
T ss_pred ec----CCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCC--CeEEEEEcCCchHHHHHHHhhccccceeeeeehhhc
Confidence 99 79999999987 99999999999875 567777876 599999999999999999999999999999988765
Q ss_pred Ccc-cc-----chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccccee-eccccHHHHHHHHHccCC
Q 017064 297 PIT-VS-----TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMEL-VPFNNFQTALSKALGLHG 369 (378)
Q Consensus 297 ~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~-~~l~~~~~a~~~~~~~~~ 369 (378)
+.+ .+ ...++.+.+++.|+...+. ......+..+++.+|+++|+|+...+. -.||++++||.-|.++++
T Consensus 255 N~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~----~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N 330 (340)
T COG2130 255 NAPELPPGPRRLPLLMAKRLRVQGFIVASD----YDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKN 330 (340)
T ss_pred CCCCCCCCcchhhHHHhhhheeEEEEechh----hhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCc
Confidence 533 22 2346678999999887322 123345888999999999999998765 479999999999999999
Q ss_pred CCCceEeeC
Q 017064 370 SQPKQVIKF 378 (378)
Q Consensus 370 ~g~kvvv~~ 378 (378)
.| |+|+++
T Consensus 331 ~G-K~vvKv 338 (340)
T COG2130 331 FG-KLVVKV 338 (340)
T ss_pred cc-eEEEEe
Confidence 99 999975
No 72
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=9.5e-38 Score=290.58 Aligned_cols=316 Identities=21% Similarity=0.236 Sum_probs=259.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..+++++. +.+++.|.|.++++||+|||.++++|++|.....|..+..+.+|.++|||++|+|+. ++++++
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 1 FKALVLEKDDGGTS-AELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred CeeEEEeccCCCcc-eEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCC
Confidence 78999998887633 889999999999999999999999999999988776543334578899999999998 777889
Q ss_pred CCCCEEeeCCC-----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHH--hccC-CCCEEEEeCCCc
Q 017064 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLN-SGDSIVQNGATS 199 (378)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~-~g~~VlV~g~~g 199 (378)
++||+|+++.. ..|+|++|++++.+.++++|+++++++++.+++.++++++++... .... +|++|+|+|++|
T Consensus 78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g 157 (324)
T cd08288 78 KPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAG 157 (324)
T ss_pred CCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCc
Confidence 99999998641 148999999999999999999999999999999999998776421 3444 678999999999
Q ss_pred hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH
Q 017064 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279 (378)
Q Consensus 200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~ 279 (378)
++|++++|+|+++|+++++++ .++++.+.++++|+++++++++... .+++++.+ ++|.++|++++......+.
T Consensus 158 ~vg~~~~~~A~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~~~~~d~~~~~~~~~~~~ 230 (324)
T cd08288 158 GVGSVAVALLARLGYEVVAST----GRPEEADYLRSLGASEIIDRAELSE-PGRPLQKE--RWAGAVDTVGGHTLANVLA 230 (324)
T ss_pred HHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHhcCCCEEEEcchhhH-hhhhhccC--cccEEEECCcHHHHHHHHH
Confidence 999999999999999999988 5788899999999999998765332 44555444 3899999999877778889
Q ss_pred hcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceeeccccHHH
Q 017064 280 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQT 359 (378)
Q Consensus 280 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~l~~~~~ 359 (378)
.++.+|+++.+|.....+...++..++.+++++.+...... ......+.++.+.+++..+.+++.++.|+++++++
T Consensus 231 ~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 306 (324)
T cd08288 231 QTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMA----PIERRRAAWARLARDLDPALLEALTREIPLADVPD 306 (324)
T ss_pred HhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecc----cchhhHHHHHHHHHHHhcCCccccceeecHHHHHH
Confidence 99999999999965322223444455578999998764322 11234567888888999998887778899999999
Q ss_pred HHHHHHccCCCCCceEeeC
Q 017064 360 ALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 360 a~~~~~~~~~~g~kvvv~~ 378 (378)
|++.+.+++..+ |+|+++
T Consensus 307 a~~~~~~~~~~~-~vvv~~ 324 (324)
T cd08288 307 AAEAILAGQVRG-RVVVDV 324 (324)
T ss_pred HHHHHhcCCccC-eEEEeC
Confidence 999999999998 999874
No 73
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=4.9e-38 Score=294.28 Aligned_cols=305 Identities=20% Similarity=0.241 Sum_probs=252.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..+++. ..+++.|.|.+.++||+|||.++++|++|+....|..+. ..|.++|||++|+|+++|+++..|
T Consensus 1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~ 75 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSL 75 (338)
T ss_pred CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccC
Confidence 789999887763 237899999999999999999999999999988886543 236789999999999999999999
Q ss_pred CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
++||+|++.+ ...|+|++|+.++.++++++|+++++.+++++++.+.|||+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 76 KVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 9999998621 0148999999999999999999999999999999999999998
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-c-cHHHHHHHhc
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLA 257 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~-~~~~i~~~~~ 257 (378)
..+.+++|++|||+|+ |++|++++++|++. |+++++++ .++++.+.++++|++.+++++. . ....+++.++
T Consensus 156 -~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~ 229 (338)
T PRK09422 156 -KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVD----INDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG 229 (338)
T ss_pred -HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEe----CChHHHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence 5688999999999995 99999999999984 99999988 5788999999999999998754 3 3455666654
Q ss_pred CCCCCc-EEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064 258 NLPEPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336 (378)
Q Consensus 258 ~~g~~D-vvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (378)
+ +| +++++.++..+..++++++++|+++.+|.... ...++...+..++.++.++.... .+.++++
T Consensus 230 --~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 295 (338)
T PRK09422 230 --G-AHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT----------RQDLEEA 295 (338)
T ss_pred --C-CcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC----------HHHHHHH
Confidence 3 88 55555556667899999999999999985432 23344455566788887654321 2457788
Q ss_pred HHHHHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 337 LCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 337 ~~~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++++|.+.+.++.++++++++|++.+.+++..| |+++++
T Consensus 296 ~~l~~~g~l~~~v~~~~~~~~~~a~~~~~~~~~~g-kvvv~~ 336 (338)
T PRK09422 296 FQFGAEGKVVPKVQLRPLEDINDIFDEMEQGKIQG-RMVIDF 336 (338)
T ss_pred HHHHHhCCCCccEEEEcHHHHHHHHHHHHcCCccc-eEEEec
Confidence 89999999877677799999999999999999988 999864
No 74
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-37 Score=291.50 Aligned_cols=313 Identities=26% Similarity=0.300 Sum_probs=267.5
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++...+.... +.+.+.+.|.++++|++|++.++++|++|+....|.++...+.|.++|||++|+|+++|+++.++
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (336)
T cd08276 1 MKAWRLSGGGGLDN-LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRF 79 (336)
T ss_pred CeEEEEeccCCCcc-eEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCC
Confidence 78999987754433 78888888889999999999999999999999888766544568899999999999999999999
Q ss_pred CCCCEEeeCCC--------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccC
Q 017064 128 APGDWVIPSPP--------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN 187 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 187 (378)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...+.++
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 159 (336)
T cd08276 80 KVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK 159 (336)
T ss_pred CCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCC
Confidence 99999998651 1478999999999999999999999999999999999999998888999
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc-c-cHHHHHHHhcCCCCCcEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLANLPEPALG 265 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~-~-~~~~i~~~~~~~g~~Dvv 265 (378)
+|++|+|+| +|++|++++++|++.|+++++++ .++++.+.++++|++.+++.+. . ....+.+.+++.+ +|++
T Consensus 160 ~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 233 (336)
T cd08276 160 PGDTVLVQG-TGGVSLFALQFAKAAGARVIATS----SSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG-VDHV 233 (336)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC-CcEE
Confidence 999999996 59999999999999999999888 4778888888899999998765 3 3456777777666 9999
Q ss_pred EeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCc
Q 017064 266 FNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 345 (378)
Q Consensus 266 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 345 (378)
||+++......++++++++|+++.+|.............++.+++++.++.... ...+++++++++++.+
T Consensus 234 i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l 303 (336)
T cd08276 234 VEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIEAHRI 303 (336)
T ss_pred EECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHHcCCc
Confidence 999998888999999999999999986544333455566778999999886532 3567788889988888
Q ss_pred ccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 346 KYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 346 ~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.+. ++.|++++++++++.+.+++..+ |+++++
T Consensus 304 ~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~ 336 (336)
T cd08276 304 RPVIDRVFPFEEAKEAYRYLESGSHFG-KVVIRV 336 (336)
T ss_pred ccccCcEEeHHHHHHHHHHHHhCCCCc-eEEEeC
Confidence 765 56899999999999999988888 999874
No 75
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=7.8e-38 Score=294.31 Aligned_cols=305 Identities=25% Similarity=0.305 Sum_probs=250.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--------CCCCCccCCCceeEEEEE
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RPKVPAVGGYEGVGEVYS 119 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~ 119 (378)
||++++.++++ +++++.+.|++.+++|+||+.++++|+.|+..+.|.... ..+.|.++|||++|+|++
T Consensus 1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~ 76 (350)
T cd08256 1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76 (350)
T ss_pred CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence 68999987764 889999999999999999999999999999988775311 013577899999999999
Q ss_pred ecCCCC--CCCCCCEEeeCC----------------------------CCCcccccceeccCC-ceEEcCCCCCHhhhhh
Q 017064 120 VGSAVT--RLAPGDWVIPSP----------------------------PSSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT 168 (378)
Q Consensus 120 vG~~v~--~~~~Gd~V~~~~----------------------------~~~G~~~~~~~~~~~-~~~~iP~~~~~~~aa~ 168 (378)
+|++++ +|++||+|++.+ ...|+|++|+.++++ .++++|+++++++++.
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 999999 999999998721 125899999999988 5789999999999998
Q ss_pred ccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-
Q 017064 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL- 247 (378)
Q Consensus 169 ~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~- 247 (378)
+ .++.|+|+++ ..+++.+|++|+|.|+ |++|++++++|+++|++++++++ .++++.+.++++|++++++.+..
T Consensus 157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~v~~~~~~~ 230 (350)
T cd08256 157 I-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLD---LKDERLALARKFGADVVLNPPEVD 230 (350)
T ss_pred h-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc---CCHHHHHHHHHcCCcEEecCCCcC
Confidence 8 7889999998 6689999999999555 99999999999999998666654 36788888899999999987754
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhh-hhcCceEEEEechhhhcccc
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF-IFKDLSLKGFWLQKWLSSEK 325 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 325 (378)
....+.+++++.+ +|++||++|+ ..+..++++++++|+++.+|.... ...++...+ ..+++++.++....
T Consensus 231 ~~~~~~~~~~~~~-vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~------ 302 (350)
T cd08256 231 VVEKIKELTGGYG-CDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLGP------ 302 (350)
T ss_pred HHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccCc------
Confidence 3466778877766 9999999996 467889999999999999985432 233333332 35677777765321
Q ss_pred HHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 326 ATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
..++++++++++|.+++ .++.|+++++++|++.+++++..+ |+|+
T Consensus 303 -----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~-kvv~ 350 (350)
T cd08256 303 -----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSI-KVVL 350 (350)
T ss_pred -----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCce-EEeC
Confidence 24677899999999987 356899999999999999988887 8875
No 76
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=8.9e-38 Score=295.23 Aligned_cols=307 Identities=24% Similarity=0.369 Sum_probs=253.7
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
|++++...+.+ +++++.+.|.+++++|+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.++
T Consensus 2 ~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~ 76 (365)
T cd05279 2 KAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLK 76 (365)
T ss_pred ceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCC
Confidence 56677766654 788999999999999999999999999999998886543 4578999999999999999999999
Q ss_pred CCCEEeeCCC-----------------------------------------------CCcccccceeccCCceEEcCCCC
Q 017064 129 PGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKDS 161 (378)
Q Consensus 129 ~Gd~V~~~~~-----------------------------------------------~~G~~~~~~~~~~~~~~~iP~~~ 161 (378)
+||+|++... ..|+|++|+.++++.++++|+++
T Consensus 77 ~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~ 156 (365)
T cd05279 77 PGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDA 156 (365)
T ss_pred CCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCC
Confidence 9999987632 13689999999999999999999
Q ss_pred CHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE
Q 017064 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241 (378)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v 241 (378)
++++++.+++++.+||+++...+++.+|++|||+|+ |++|++++++|+++|++++++++ .++++.+.++++|++++
T Consensus 157 ~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~ 232 (365)
T cd05279 157 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD---INKDKFEKAKQLGATEC 232 (365)
T ss_pred CHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCee
Confidence 999999999999999999888889999999999975 99999999999999997555542 37888899999999999
Q ss_pred EccCcc--c-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcc-cCCEEEEEecCC-CCCccccchhhhhcCceEEEE
Q 017064 242 FTESQL--E-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLS-QGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGF 315 (378)
Q Consensus 242 i~~~~~--~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 315 (378)
++..+. + .+.++++++ .+ +|++||++|. ..+..++++++ ++|+++.+|... .....++...+ .++.++.|.
T Consensus 233 v~~~~~~~~~~~~l~~~~~-~~-~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~ 309 (365)
T cd05279 233 INPRDQDKPIVEVLTEMTD-GG-VDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGT 309 (365)
T ss_pred cccccccchHHHHHHHHhC-CC-CcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEE
Confidence 987664 3 355667664 34 9999999986 66788999999 999999998543 23445555556 677888887
Q ss_pred echhhhccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
...++ ...+.+.+++++++++.+++. ++.|+++++++|++.+.+++.. |++|
T Consensus 310 ~~~~~-------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~--~~~~ 364 (365)
T cd05279 310 VFGGW-------KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI--RTIL 364 (365)
T ss_pred eccCC-------chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce--eeee
Confidence 65433 123567788899999988753 5679999999999999876654 7766
No 77
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.6e-37 Score=290.72 Aligned_cols=305 Identities=25% Similarity=0.352 Sum_probs=254.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||+++++.++. +.+.+.+.|.+.++||+|+|.++++|+.|+....|..+.. .+|.++|+|++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 75 (337)
T cd08261 1 MKALVCEKPGR----LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGL 75 (337)
T ss_pred CeEEEEeCCCc----eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCC
Confidence 68888877653 8899999999999999999999999999999988766543 457789999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++.+. ..|+|++|++++++ ++++|+++++++++++ ..++++++++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~- 152 (337)
T cd08261 76 KVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV- 152 (337)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-
Confidence 99999997321 24899999999999 9999999999999877 4678888888
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLP 260 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g 260 (378)
...++.+|++|||+|+ |.+|++++|+|+.+|++|++++ .++++.++++++|++++++++... .+.+.+.+++.+
T Consensus 153 ~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~----~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~ 227 (337)
T cd08261 153 RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVD----IDDERLEFARELGADDTINVGDEDVAARLRELTDGEG 227 (337)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEC----CCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC
Confidence 6689999999999975 8999999999999999999887 478888899999999999888654 456777777655
Q ss_pred CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064 261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 339 (378)
Q Consensus 261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (378)
+|+++||+|+ ..+..++++++++|+++.++... ....++...+..+++++.+... ...+.+++++++
T Consensus 228 -vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l 295 (337)
T cd08261 228 -ADVVIDATGNPASMEEAVELVAHGGRVVLVGLSK-GPVTFPDPEFHKKELTILGSRN----------ATREDFPDVIDL 295 (337)
T ss_pred -CCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCC-CCCccCHHHHHhCCCEEEEecc----------CChhhHHHHHHH
Confidence 9999999986 56688999999999999998543 2333444455667787776521 123567888999
Q ss_pred HHcCCccc--c-ceeeccccHHHHHHHHHccC-CCCCceEeeC
Q 017064 340 AREGKLKY--D-MELVPFNNFQTALSKALGLH-GSQPKQVIKF 378 (378)
Q Consensus 340 l~~g~~~~--~-~~~~~l~~~~~a~~~~~~~~-~~g~kvvv~~ 378 (378)
+++|.+++ . ...|++++++++++.+.+++ ..+ |+|++|
T Consensus 296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-k~v~~~ 337 (337)
T cd08261 296 LESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVI-KVLIEF 337 (337)
T ss_pred HHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceE-EEEEeC
Confidence 99999987 3 56799999999999999884 667 999986
No 78
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.1e-37 Score=287.21 Aligned_cols=321 Identities=25% Similarity=0.330 Sum_probs=268.8
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++.+.. +++.+.+.|.+.+++|+|||.++++|+.|+....|.++....+|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 1 MKAIVIKEPGGPEV-LELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred CeEEEEecCCCccc-ceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCC
Confidence 68999988776544 77888888889999999999999999999998877665444567899999999999999999999
Q ss_pred CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (378)
Q Consensus 128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~ 207 (378)
++||+|++... .|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.....+.++++|+|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~ 158 (323)
T cd05276 80 KVGDRVCALLA-GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ 158 (323)
T ss_pred CCCCEEEEecC-CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence 99999998754 48999999999999999999999999999999999999999887889999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT 286 (378)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~ 286 (378)
++++.|++++++. .++++.+.++++|++.+++..... ...+.+...+.+ +|++||++|+.....++++++++|+
T Consensus 159 ~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~g~~~~~~~~~~~~~~g~ 233 (323)
T cd05276 159 LAKALGARVIATA----GSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRG-VDVILDMVGGDYLARNLRALAPDGR 233 (323)
T ss_pred HHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCC-eEEEEECCchHHHHHHHHhhccCCE
Confidence 9999999998887 467778888889998888776543 355666666545 9999999999888889999999999
Q ss_pred EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHH
Q 017064 287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKAL 365 (378)
Q Consensus 287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~ 365 (378)
++.++........++...++.+++++.++..........+......++++.+++.++.+++. ++.|++++++++++.+.
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 313 (323)
T cd05276 234 LVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRME 313 (323)
T ss_pred EEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHH
Confidence 99998654433344555556789999988765432222344456677888999999998765 56899999999999999
Q ss_pred ccCCCCCceEe
Q 017064 366 GLHGSQPKQVI 376 (378)
Q Consensus 366 ~~~~~g~kvvv 376 (378)
+++..+ |+++
T Consensus 314 ~~~~~~-kvv~ 323 (323)
T cd05276 314 SNEHIG-KIVL 323 (323)
T ss_pred hCCCcc-eEeC
Confidence 888887 8774
No 79
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2e-37 Score=290.48 Aligned_cols=306 Identities=22% Similarity=0.256 Sum_probs=247.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCC----------CCCCCCccCCCceeEEE
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP----------VRPKVPAVGGYEGVGEV 117 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V 117 (378)
||++++..+ . +++++.+.|.++++||+|||.++++|+.|+....|... .....|.++|+|++|+|
T Consensus 1 m~a~~~~~~-~----~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 75 (341)
T cd08262 1 MRAAVFRDG-P----LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75 (341)
T ss_pred CceEEEeCC-c----eEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence 688888765 2 88999999999999999999999999999998887321 01135788999999999
Q ss_pred EEecCCCCC-CCCCCEEeeCCC----------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 118 YSVGSAVTR-LAPGDWVIPSPP----------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 118 ~~vG~~v~~-~~~Gd~V~~~~~----------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
+++|+++++ +++||+|++.+. ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus 76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~ 154 (341)
T cd08262 76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV 154 (341)
T ss_pred EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence 999999997 999999998732 25899999999999999999999999887 566788999986
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH----HHHHHHh
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLL 256 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~----~~i~~~~ 256 (378)
..+++++|++|||+|+ |++|++++|+|+++|++++++++ .++++.+.++++|++++++++..+. ..+....
T Consensus 155 -~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 229 (341)
T cd08262 155 -RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASD---FSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229 (341)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC---CCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHh
Confidence 6689999999999976 99999999999999998666654 3688888999999999998765422 1344455
Q ss_pred cCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHH
Q 017064 257 ANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 335 (378)
Q Consensus 257 ~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (378)
++.+ +|++||++|+. ....++++++++|+++.+|..... ..+.......+++++.+.... ..+.+++
T Consensus 230 ~~~~-~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 297 (341)
T cd08262 230 GGPK-PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES-DNIEPALAIRKELTLQFSLGY----------TPEEFAD 297 (341)
T ss_pred CCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC-CccCHHHHhhcceEEEEEecc----------cHHHHHH
Confidence 5544 99999999984 668899999999999999855322 222322334577777654322 1135778
Q ss_pred HHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 336 LLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 336 ~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
+++++++|.+.+. .+.|++++++++++.+.+++..+ |+|++
T Consensus 298 ~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~-kvvv~ 341 (341)
T cd08262 298 ALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHC-KILVD 341 (341)
T ss_pred HHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCce-EEEeC
Confidence 8899999999863 46799999999999999999888 99975
No 80
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.8e-37 Score=289.95 Aligned_cols=307 Identities=24% Similarity=0.274 Sum_probs=254.5
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
||++++..+++ +++.+.+.|++ .++||+|||.++++|+.|+..+.|.++.. ++|.++|||++|+|+++|+++.+
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~ 75 (345)
T cd08286 1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTN 75 (345)
T ss_pred CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCccc
Confidence 68888887764 88899999886 89999999999999999999988876543 35789999999999999999999
Q ss_pred CCCCCEEeeCCC---------------------------CCcccccceeccCC--ceEEcCCCCCHhhhhhccccHHHHH
Q 017064 127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTAL 177 (378)
Q Consensus 127 ~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ta~ 177 (378)
+++||+|++.+. ..|+|++|+.++.+ .++++|+++++.+++.+++.+++||
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~ 155 (345)
T cd08286 76 FKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGY 155 (345)
T ss_pred cCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHH
Confidence 999999987541 12889999999987 8999999999999999999999999
Q ss_pred HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHH
Q 017064 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGL 255 (378)
Q Consensus 178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~ 255 (378)
+++....++.+|++|||.|+ |++|++++|+|+++| .+++++. .++++.+.++++|++.++++...+ ...+.++
T Consensus 156 ~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (345)
T cd08286 156 ECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVD----LDDNRLEVAKKLGATHTVNSAKGDAIEQVLEL 230 (345)
T ss_pred HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCceeccccccHHHHHHHH
Confidence 98777788999999999886 999999999999999 6777754 467888888999999999887543 3567777
Q ss_pred hcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHH
Q 017064 256 LANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID 334 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (378)
+++.+ +|++|||+|. .....++++++++|+++.+|... ....+++..++.+++++.+.... .+.++
T Consensus 231 ~~~~~-~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 297 (345)
T cd08286 231 TDGRG-VDVVIEAVGIPATFELCQELVAPGGHIANVGVHG-KPVDLHLEKLWIKNITITTGLVD-----------TNTTP 297 (345)
T ss_pred hCCCC-CCEEEECCCCHHHHHHHHHhccCCcEEEEecccC-CCCCcCHHHHhhcCcEEEeecCc-----------hhhHH
Confidence 77655 9999999986 45678889999999999998543 23445556667789998875321 13577
Q ss_pred HHHHHHHcCCcccc---ceeeccccHHHHHHHHHccC--CCCCceEeeC
Q 017064 335 YLLCLAREGKLKYD---MELVPFNNFQTALSKALGLH--GSQPKQVIKF 378 (378)
Q Consensus 335 ~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~--~~g~kvvv~~ 378 (378)
++.++++++.+++. +++|++++++++++.+.+.. ... |+||++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~-k~~~~~ 345 (345)
T cd08286 298 MLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKAL-KVIIDF 345 (345)
T ss_pred HHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCee-EEEEeC
Confidence 78899999998753 46899999999999998763 344 999875
No 81
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.3e-37 Score=290.49 Aligned_cols=304 Identities=24% Similarity=0.257 Sum_probs=251.9
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCC-CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
|+++++..++. +.+++++.|.+. ++||+|+|.++++|+.|+....|.++. ..|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~ 74 (344)
T cd08284 1 MKAVVFKGPGD----VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRT 74 (344)
T ss_pred CeeEEEecCCC----ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCccc
Confidence 67888876643 889999999885 999999999999999999988886653 35788999999999999999999
Q ss_pred CCCCCEEeeCCC------------------------------CCcccccceeccCC--ceEEcCCCCCHhhhhhccccHH
Q 017064 127 LAPGDWVIPSPP------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPL 174 (378)
Q Consensus 127 ~~~Gd~V~~~~~------------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa~~~~~~~ 174 (378)
+++||+|++.+. ..|+|++|+.++.+ .++++|++++++++++++++++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ 154 (344)
T cd08284 75 LKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP 154 (344)
T ss_pred cCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence 999999998541 13889999999975 9999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHH
Q 017064 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNV 252 (378)
Q Consensus 175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i 252 (378)
|||+++.. ..+.+|++|||+|+ |++|++++++|+.+|+ +++++. ..+++.+.++++|+. +++.+.. +...+
T Consensus 155 ta~~~~~~-~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~-~~~~~~~~~~~~l 227 (344)
T cd08284 155 TGYFGAKR-AQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVD----PVPERLERAAALGAE-PINFEDAEPVERV 227 (344)
T ss_pred HHHhhhHh-cCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEc----CCHHHHHHHHHhCCe-EEecCCcCHHHHH
Confidence 99999975 88999999999974 9999999999999997 777775 467888888999986 4555443 44667
Q ss_pred HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064 253 KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 331 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (378)
.+++++.+ +|++|||+|+ ..+..++++++++|+++.+|..............+.+++++.+... ...+
T Consensus 228 ~~~~~~~~-~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 296 (344)
T cd08284 228 REATEGRG-ADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC----------PVRS 296 (344)
T ss_pred HHHhCCCC-CCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC----------Ccch
Confidence 77777655 9999999996 4678999999999999999965433334445566778888775421 1346
Q ss_pred HHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 332 MIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 332 ~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.+++++++++++.+++ .++.|++++++++++.+.+++. + |+|++
T Consensus 297 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-k~Vi~ 343 (344)
T cd08284 297 LFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-L-KVVLD 343 (344)
T ss_pred hHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-e-EEEec
Confidence 7888999999999885 3567999999999999998777 7 99986
No 82
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=2.7e-37 Score=288.36 Aligned_cols=305 Identities=28% Similarity=0.368 Sum_probs=254.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
|+++++..++.. +.+.+.|.|.+.+++|+|+|.++++|++|+....|..+.. +.|.++|||++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~ 76 (332)
T cd08259 1 MKAAILHKPNKP---LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG-KYPLILGHEIVGTVEEVGEGVERF 76 (332)
T ss_pred CeEEEEecCCCc---eEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC-CCCeeccccceEEEEEECCCCccC
Confidence 688888763332 8889999999999999999999999999999988866543 457899999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++.
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~ 156 (332)
T cd08259 77 KPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK 156 (332)
T ss_pred CCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence 99999998751 1489999999999999999999999999999999999999998
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
. +.+.+++++||+|++|++|+++++++++.|+++++++ .++++.+.++++|.+.+++..+ ..+.+.+.. +
T Consensus 157 ~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~ 226 (332)
T cd08259 157 R-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT----RSPEKLKILKELGADYVIDGSK-FSEDVKKLG----G 226 (332)
T ss_pred H-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCcEEEecHH-HHHHHHhcc----C
Confidence 7 8999999999999999999999999999999999888 4667788888899988887655 334444432 3
Q ss_pred CcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHH
Q 017064 262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 341 (378)
Q Consensus 262 ~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (378)
+|++++|+|......++++++++|+++.++........+.......+++++.++... ..+.+++++++++
T Consensus 227 ~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 296 (332)
T cd08259 227 ADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA----------TKADVEEALKLVK 296 (332)
T ss_pred CCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC----------CHHHHHHHHHHHH
Confidence 999999999988889999999999999998554332222333344577777765311 2356788889999
Q ss_pred cCCcccc-ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 342 EGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 342 ~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
++.+++. ++.|+++++++||+.+.+++..+ |+|++
T Consensus 297 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~ 332 (332)
T cd08259 297 EGKIKPVIDRVVSLEDINEALEDLKSGKVVG-RIVLK 332 (332)
T ss_pred cCCCccceeEEEcHHHHHHHHHHHHcCCccc-EEEeC
Confidence 9998865 46899999999999999998888 99874
No 83
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.5e-37 Score=289.06 Aligned_cols=305 Identities=23% Similarity=0.328 Sum_probs=252.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.+++. +.+.+.+.|++.+++|+|||+++++|+.|+....|.++ ....|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~ 75 (343)
T cd08235 1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF 75 (343)
T ss_pred CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCC
Confidence 58888887663 78899999999999999999999999999998887654 22357789999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCc-----eEEcCCCCCHhhhhhccccHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSV-----WHKVSKDSPMEYAATIIVNPLTA 176 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~-----~~~iP~~~~~~~aa~~~~~~~ta 176 (378)
++||+|++.+. ..|+|++|++++.+. ++++|+++++.+++.+ ....+|
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a 154 (343)
T cd08235 76 KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACC 154 (343)
T ss_pred CCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHH
Confidence 99999998631 248999999999998 9999999999999876 678899
Q ss_pred HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHH
Q 017064 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG 254 (378)
Q Consensus 177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~ 254 (378)
|+++.. .++.+|++|||+|+ |++|++++|+|++.|++ +++++ .++++.+.++.+|.++++++++.. .+.+.+
T Consensus 155 ~~~l~~-~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~ 228 (343)
T cd08235 155 INAQRK-AGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSD----LNEFRLEFAKKLGADYTIDAAEEDLVEKVRE 228 (343)
T ss_pred HHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEecCCccCHHHHHHH
Confidence 999966 58999999999975 99999999999999999 77666 477788888889999999887654 456777
Q ss_pred HhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCC-ccccchhhhhcCceEEEEechhhhccccHHHHHHH
Q 017064 255 LLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM 332 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (378)
.+++.+ +|++|||+++. ....++++++++|+++.++...... ..++...+..+++.+.+.... ..+.
T Consensus 229 ~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~ 297 (343)
T cd08235 229 LTDGRG-ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA----------SPED 297 (343)
T ss_pred HhCCcC-CCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC----------Chhh
Confidence 777665 99999999965 6688999999999999998544321 333445566677877765432 1145
Q ss_pred HHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 333 IDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 333 ~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
+++++++++++.+++ ....|+++++.++++.+.+++ .+ |+|+.
T Consensus 298 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~-k~vi~ 343 (343)
T cd08235 298 YKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SL-KIVIT 343 (343)
T ss_pred HHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cE-EEEeC
Confidence 778889999999874 245799999999999999998 87 99873
No 84
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=5e-37 Score=285.06 Aligned_cols=319 Identities=25% Similarity=0.341 Sum_probs=268.9
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++.+.. +.+.+.+.|.+.+++|+|++.++++|++|.....|..+...+.|.++|||++|+|+.+|+++..|
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 1 MRAIRYHEFGAPDV-LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred CceEEEcccCCccc-ceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCC
Confidence 57888877665433 78889999999999999999999999999998887665444578899999999999999999999
Q ss_pred CCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064 128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (378)
Q Consensus 128 ~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~ 203 (378)
++||+|++... ..|++++|+.++++.++++|+++++.+++.+++++.+||+++...+++.+|++|+|+|+++++|+
T Consensus 80 ~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~ 159 (325)
T cd08253 80 KVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGH 159 (325)
T ss_pred CCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHH
Confidence 99999998762 14899999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282 (378)
Q Consensus 204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~ 282 (378)
+++++++++|+++++++ .++++.+.++++|++++++....+ ...+.+.+.+.+ +|++++|+|+......+++++
T Consensus 160 ~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~ 234 (325)
T cd08253 160 AAVQLARWAGARVIATA----SSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQG-VDVIIEVLANVNLAKDLDVLA 234 (325)
T ss_pred HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCc-eEEEEECCchHHHHHHHHhhC
Confidence 99999999999999888 467788888889999998876543 455666666555 999999999988888999999
Q ss_pred cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHH
Q 017064 283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTAL 361 (378)
Q Consensus 283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~ 361 (378)
++|+++.++... ....++...++.+++++.+..... ..+....+.++.+.+++.++.+++. +..|+++++++++
T Consensus 235 ~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 309 (325)
T cd08253 235 PGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYT----ATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAH 309 (325)
T ss_pred CCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehhh----cCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHH
Confidence 999999998543 233344455567788887765322 2345566788888899999988765 5689999999999
Q ss_pred HHHHccCCCCCceEeeC
Q 017064 362 SKALGLHGSQPKQVIKF 378 (378)
Q Consensus 362 ~~~~~~~~~g~kvvv~~ 378 (378)
+.+.++...| |+++++
T Consensus 310 ~~~~~~~~~~-kvv~~~ 325 (325)
T cd08253 310 EAVESGGAIG-KVVLDP 325 (325)
T ss_pred HHHHcCCCcc-eEEEeC
Confidence 9999988888 999864
No 85
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.5e-37 Score=287.62 Aligned_cols=310 Identities=25% Similarity=0.274 Sum_probs=261.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++.+..++++. +.+.+.+.|.+.+++|+|++.++++|+.|.....|.++...+.|.++|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGL--LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCc--eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccC
Confidence 6899999888764 57778888999999999999999999999999888776444567899999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++.+. ..|+|++|+.++.+.++++|+++++.+++.++.++.|||+++.
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~ 158 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVV 158 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 99999986210 1388999999999999999999999999999999999999998
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccH-HHHHHHhcCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLP 260 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~-~~i~~~~~~~g 260 (378)
....+.++++|||.|+ |.+|++++++|+.+|++|++++ .++++.+.++++|++++++...... ..+ ..+.+.+
T Consensus 159 ~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 232 (338)
T cd08254 159 RAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVD----IKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGG 232 (338)
T ss_pred hccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCC
Confidence 8888999999999865 8999999999999999988887 4788888889999999988776543 334 5555545
Q ss_pred CCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064 261 EPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 339 (378)
Q Consensus 261 ~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (378)
+|+++||+|.. .+..++++++++|+++.+|... ....++...++.++.++.++... ..+.+..++++
T Consensus 233 -~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l 300 (338)
T cd08254 233 -FDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGR-DKLTVDLSDLIARELRIIGSFGG----------TPEDLPEVLDL 300 (338)
T ss_pred -ceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCC-CCCccCHHHHhhCccEEEEeccC----------CHHHHHHHHHH
Confidence 99999999864 6689999999999999998543 23345556677788888876432 12567788899
Q ss_pred HHcCCccccceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 340 AREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 340 l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++.+++.++.|++++++++++.+.+++..+ |+|+++
T Consensus 301 l~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~ 338 (338)
T cd08254 301 IAKGKLDPQVETRPLDEIPEVLERLHKGKVKG-RVVLVP 338 (338)
T ss_pred HHcCCCcccceeEcHHHHHHHHHHHHcCCccc-eEEEeC
Confidence 99999987777899999999999999999998 999875
No 86
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=3.7e-37 Score=288.05 Aligned_cols=319 Identities=22% Similarity=0.240 Sum_probs=260.9
Q ss_pred cceEEEcccCCCcc--ceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~--~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
|+++++..++.+.. .+...+.+.|.+.+++|+||+.++++|++|+....+..+. .+.|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 57888888877541 2566778888899999999999999999999988776552 24577899999999999999999
Q ss_pred CCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC-----CCEEEEeCCC
Q 017064 126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT 198 (378)
Q Consensus 126 ~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlV~g~~ 198 (378)
.+++||+|++... ..|+|++|+.++.++++++|+++++++++.+++...+||+++...+.+.+ |++|+|+|++
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~ 159 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA 159 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence 9999999998642 35899999999999999999999999999999999999999888788887 9999999998
Q ss_pred chHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC-ccHHH
Q 017064 199 SIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK 276 (378)
Q Consensus 199 g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~-~~~~~ 276 (378)
|++|++++++|+++| ++|++++ .++++.+.++++|++++++........++.. ++. ++|+++||+|+ ..+..
T Consensus 160 g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~-~~d~vl~~~~~~~~~~~ 233 (336)
T cd08252 160 GGVGSIAIQLAKQLTGLTVIATA----SRPESIAWVKELGADHVINHHQDLAEQLEAL-GIE-PVDYIFCLTDTDQHWDA 233 (336)
T ss_pred chHHHHHHHHHHHcCCcEEEEEc----CChhhHHHHHhcCCcEEEeCCccHHHHHHhh-CCC-CCCEEEEccCcHHHHHH
Confidence 999999999999999 9999888 4678888899999999998765333445533 333 49999999996 57789
Q ss_pred HHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccc--cHHHHHHHHHHHHHHHHcCCccccc----e
Q 017064 277 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSE--KATECRNMIDYLLCLAREGKLKYDM----E 350 (378)
Q Consensus 277 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~~~~~----~ 350 (378)
++++++++|+++.+|... ..++...+..+++++.+..+..+.... .+......++++++++.+|.+++.. .
T Consensus 234 ~~~~l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 310 (336)
T cd08252 234 MAELIAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLG 310 (336)
T ss_pred HHHHhcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeec
Confidence 999999999999998442 334444555688888886653211111 1224456788999999999998652 3
Q ss_pred eeccccHHHHHHHHHccCCCCCceEee
Q 017064 351 LVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 351 ~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.++++++++|++.+.++...+ |++++
T Consensus 311 ~~~~~~~~~a~~~~~~~~~~~-~vv~~ 336 (336)
T cd08252 311 PINAENLREAHALLESGKTIG-KIVLE 336 (336)
T ss_pred CCCHHHHHHHHHHHHcCCccc-eEEeC
Confidence 479999999999999999888 98874
No 87
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.1e-36 Score=282.02 Aligned_cols=318 Identities=25% Similarity=0.312 Sum_probs=265.0
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
+++....++.+.. +.+.+.+.+.+.+++|+|+|.++++|++|+....+.++. .+|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (320)
T cd05286 1 KAVRIHKTGGPEV-LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFK 77 (320)
T ss_pred CeEEEecCCCccc-eEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCC
Confidence 3555555554433 677777777789999999999999999999988776543 3577899999999999999999999
Q ss_pred CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHH
Q 017064 129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (378)
Q Consensus 129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~l 208 (378)
+||+|++... .|+|++|+.++.+.++++|+++++.+++.+++.++++|+++....++.+|++|+|+|++|++|++++++
T Consensus 78 ~G~~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~ 156 (320)
T cd05286 78 VGDRVAYAGP-PGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW 156 (320)
T ss_pred CCCEEEEecC-CCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 9999998751 389999999999999999999999999999999999999998888999999999999989999999999
Q ss_pred HHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEE
Q 017064 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTM 287 (378)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~ 287 (378)
|+++|+++++++ .++++.+.++++|++++++..... ...++..+.+.+ +|++++|+++.....++++++++|++
T Consensus 157 a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g~~ 231 (320)
T cd05286 157 AKALGATVIGTV----SSEEKAELARAAGADHVINYRDEDFVERVREITGGRG-VDVVYDGVGKDTFEGSLDSLRPRGTL 231 (320)
T ss_pred HHHcCCEEEEEc----CCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCC-eeEEEECCCcHhHHHHHHhhccCcEE
Confidence 999999999887 477888888999999998776543 356777776666 99999999998888999999999999
Q ss_pred EEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHc
Q 017064 288 VTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALG 366 (378)
Q Consensus 288 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~ 366 (378)
+.+|........++...+..+++++.+.....+. .++....+.+++++++++++.+.+. ++.|++++++++++.+.+
T Consensus 232 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~ 309 (320)
T cd05286 232 VSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI--ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLES 309 (320)
T ss_pred EEEecCCCCCCccCHHHHHhcCcEEEEEehhhhc--CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHc
Confidence 9998544332233444444788998876654432 2455667788899999999988865 467999999999999999
Q ss_pred cCCCCCceEeeC
Q 017064 367 LHGSQPKQVIKF 378 (378)
Q Consensus 367 ~~~~g~kvvv~~ 378 (378)
+...+ |+|+++
T Consensus 310 ~~~~~-~vv~~~ 320 (320)
T cd05286 310 RKTTG-KLLLIP 320 (320)
T ss_pred CCCCc-eEEEeC
Confidence 88888 999864
No 88
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1e-37 Score=292.06 Aligned_cols=312 Identities=27% Similarity=0.346 Sum_probs=252.4
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
|+++++..++ +.. +++++.+.|.++++||+||+.++++|++|+....+..+ ...|.++|||++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~-~~~-~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPG-GGL-LVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI--PSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCC-CCc-ccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc--cCCCceeeeeeeEEEEEeCCCcCcC
Confidence 6899999885 333 88899999999999999999999999999987755441 1246789999999999999999999
Q ss_pred CCCCEEeeCCC-------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhcc----------CCCC
Q 017064 128 APGDWVIPSPP-------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL----------NSGD 190 (378)
Q Consensus 128 ~~Gd~V~~~~~-------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~ 190 (378)
++||+|++... ..|+|++|++++.+.++++|+++++.+++.+++.+.|||+++.+..++ .+++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~ 156 (339)
T cd08249 77 KVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK 156 (339)
T ss_pred CCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence 99999998753 248999999999999999999999999999999999999998776554 7899
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV 269 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~ 269 (378)
+|+|+|++|.+|++++++|+++|+++++++ ++++.+.++++|++++++.++.. .+.+++.++ . ++|+++|++
T Consensus 157 ~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~-~~d~vl~~~ 229 (339)
T cd08249 157 PVLIWGGSSSVGTLAIQLAKLAGYKVITTA-----SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-G-KLRYALDCI 229 (339)
T ss_pred EEEEEcChhHHHHHHHHHHHHcCCeEEEEE-----CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-C-CeeEEEEee
Confidence 999999999999999999999999998877 34677888899999999887654 455766665 3 499999999
Q ss_pred CC-ccHHHHHHhccc--CCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhc--cccHHHHHHHHHHHHHHHHcCC
Q 017064 270 GG-NSASKVLKFLSQ--GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLS--SEKATECRNMIDYLLCLAREGK 344 (378)
Q Consensus 270 g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~ 344 (378)
|+ ..+..+++++++ +|+++.+|...... ....+.+........+.. ...+......++++.++++++.
T Consensus 230 g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (339)
T cd08249 230 STPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGK 302 (339)
T ss_pred ccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCC
Confidence 98 777999999999 99999998554322 112233333333222211 0123334567888999999999
Q ss_pred cccc-ceeec--cccHHHHHHHHHccC-CCCCceEeeC
Q 017064 345 LKYD-MELVP--FNNFQTALSKALGLH-GSQPKQVIKF 378 (378)
Q Consensus 345 ~~~~-~~~~~--l~~~~~a~~~~~~~~-~~g~kvvv~~ 378 (378)
+.+. ...++ ++++++|++.+..++ ..+ |+|+++
T Consensus 303 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-kvvv~~ 339 (339)
T cd08249 303 LKPHPVRVVEGGLEGVQEGLDLLRKGKVSGE-KLVVRL 339 (339)
T ss_pred ccCCCceecCCcHHHHHHHHHHHHCCCccce-EEEEeC
Confidence 9875 34677 999999999999998 888 999875
No 89
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.5e-36 Score=284.12 Aligned_cols=314 Identities=29% Similarity=0.365 Sum_probs=262.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++...+.+.. +.+.+.+.|.+.+++|+|++.++++|++|+..+.|..+....+|..+|||++|+|+.+|+++..+
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 1 MKAVVIRGHGGPEV-LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred CeEEEEecCCCccc-eeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCC
Confidence 68888876555443 78888888889999999999999999999998887654333457889999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++.+. ..|++++|+.++.+.++++|+++++.+++++++++.+||+++.
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~ 159 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLV 159 (342)
T ss_pred CCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHH
Confidence 99999998632 2478999999999999999999999999999999999999998
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLP 260 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g 260 (378)
+...+.++++++|+|+++++|+++++++++.|+++++++ .++++.+.++.+|.+.+++..+. ....+.+.+.+.+
T Consensus 160 ~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd08266 160 TRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATA----GSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRG 235 (342)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCC
Confidence 888999999999999988999999999999999998887 46777888888898888876553 3355666665544
Q ss_pred CCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064 261 EPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340 (378)
Q Consensus 261 ~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 340 (378)
+|++++++|...+..++++++++|+++.++........++....+.+++++.+..... ...+.++++++
T Consensus 236 -~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l 304 (342)
T cd08266 236 -VDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT----------KAELDEALRLV 304 (342)
T ss_pred -CcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC----------HHHHHHHHHHH
Confidence 9999999999888999999999999999986554333344445567888888876532 24677888999
Q ss_pred HcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 341 REGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 341 ~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++.+++. ++.|++++++++++.+.++...+ |+|++.
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~ 342 (342)
T cd08266 305 FRGKLKPVIDSVFPLEEAAEAHRRLESREQFG-KIVLTP 342 (342)
T ss_pred HcCCcccceeeeEcHHHHHHHHHHHHhCCCCc-eEEEeC
Confidence 99988865 56899999999999999888888 999864
No 90
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-36 Score=282.28 Aligned_cols=319 Identities=24% Similarity=0.308 Sum_probs=266.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++.+.. +.+.+.+.|.+.+++|+|++.++++|++|.....+........|.++|||++|+|+.+|+++..+
T Consensus 1 ~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 1 MKALVLESFGGPEV-FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred CeEEEEccCCCchh-eEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCC
Confidence 68999988887654 77888888889999999999999999999998877654333457889999999999999999999
Q ss_pred CCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064 128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (378)
Q Consensus 128 ~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~ 203 (378)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++....++.+|++++|+|+++.+|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~ 159 (326)
T cd08272 80 RVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH 159 (326)
T ss_pred CCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHH
Confidence 99999998751 14789999999999999999999999999999999999999888899999999999999899999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283 (378)
Q Consensus 204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~ 283 (378)
+++++|+.+|+++++++ .+ ++.+.++++|++.+++........+...+++.+ +|+++||+|+.....+++++++
T Consensus 160 ~~~~~a~~~g~~v~~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~ 233 (326)
T cd08272 160 VAVQLAKAAGARVYATA----SS-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRG-FDVVFDTVGGETLDASFEAVAL 233 (326)
T ss_pred HHHHHHHHcCCEEEEEe----ch-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCC-CcEEEECCChHHHHHHHHHhcc
Confidence 99999999999999887 35 778888889999888776553355777777655 9999999999878889999999
Q ss_pred CCEEEEEecCCCCCccccchhhhhcCceEEEEechh-hhccccHHHHHHHHHHHHHHHHcCCcccc-c-eeeccccHHHH
Q 017064 284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK-WLSSEKATECRNMIDYLLCLAREGKLKYD-M-ELVPFNNFQTA 360 (378)
Q Consensus 284 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~-~~~~l~~~~~a 360 (378)
+|+++.++... +........+++++.+..... +....++....+.+.++++++.++.+++. . +.|++++++++
T Consensus 234 ~g~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 309 (326)
T cd08272 234 YGRVVSILGGA----THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAA 309 (326)
T ss_pred CCEEEEEecCC----ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHH
Confidence 99999998543 222223346888888876532 11223445566788999999999998865 3 78999999999
Q ss_pred HHHHHccCCCCCceEeeC
Q 017064 361 LSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 361 ~~~~~~~~~~g~kvvv~~ 378 (378)
++.+.+++..+ |+|+++
T Consensus 310 ~~~~~~~~~~~-~vv~~~ 326 (326)
T cd08272 310 HARLESGSARG-KIVIDV 326 (326)
T ss_pred HHHHHcCCccc-EEEEEC
Confidence 99999888888 999874
No 91
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1e-36 Score=289.05 Aligned_cols=304 Identities=22% Similarity=0.211 Sum_probs=246.6
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
||++++..++. ++++++|.|.+ +++||+|||.++++|++|++...|..+. ..|.++|||++|+|+++|+++..
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~ 74 (375)
T cd08282 1 MKAVVYGGPGN----VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVES 74 (375)
T ss_pred CceEEEecCCc----eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCc
Confidence 57888876653 88999999986 8999999999999999999999887652 46889999999999999999999
Q ss_pred CCCCCEEeeCCC------------------------------------CCcccccceeccCC--ceEEcCCCCCHh---h
Q 017064 127 LAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPME---Y 165 (378)
Q Consensus 127 ~~~Gd~V~~~~~------------------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~---~ 165 (378)
+++||+|++.+. .+|+|++|++++.+ .++++|++++++ +
T Consensus 75 ~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~ 154 (375)
T cd08282 75 LKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDD 154 (375)
T ss_pred CCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhh
Confidence 999999986211 13889999999975 899999999998 5
Q ss_pred hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEcc
Q 017064 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTE 244 (378)
Q Consensus 166 aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~ 244 (378)
+++++.++.|||+++ ..+.+.+|++|+|.|+ |++|++++|+|+++|+ +++++. .++++.+.++++|++ .+++
T Consensus 155 ~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~----~~~~~~~~~~~~g~~-~v~~ 227 (375)
T cd08282 155 YLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVD----HVPERLDLAESIGAI-PIDF 227 (375)
T ss_pred eeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCCe-Eecc
Confidence 677888899999999 6689999999999876 9999999999999998 677754 478888999999984 5666
Q ss_pred Ccc-cHHHHHHHhcCCCCCcEEEeCCCCcc------------HHHHHHhcccCCEEEEEecCCCCC------------cc
Q 017064 245 SQL-EVKNVKGLLANLPEPALGFNCVGGNS------------ASKVLKFLSQGGTMVTYGGMSKKP------------IT 299 (378)
Q Consensus 245 ~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~~------------~~ 299 (378)
++. ..+.+.+.++ .+ +|+++||+|+.. +..++++++++|+++..|...... ..
T Consensus 228 ~~~~~~~~i~~~~~-~~-~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~ 305 (375)
T cd08282 228 SDGDPVEQILGLEP-GG-VDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELS 305 (375)
T ss_pred CcccHHHHHHHhhC-CC-CCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcccc
Confidence 543 3456777766 34 999999999864 688999999999999887543211 12
Q ss_pred ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 300 VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
++...++.++..+.+.... ..+.++.++++++++++++ .++.|+++++++|++.+.+++ .+ |+|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~-kvvv 373 (375)
T cd08282 306 FDFGLLWAKGLSFGTGQAP----------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET-KVVI 373 (375)
T ss_pred ccHHHHHhcCcEEEEecCC----------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce-EEEe
Confidence 3344455666666554321 2356778889999999986 457899999999999999888 87 9998
Q ss_pred eC
Q 017064 377 KF 378 (378)
Q Consensus 377 ~~ 378 (378)
++
T Consensus 374 ~~ 375 (375)
T cd08282 374 KP 375 (375)
T ss_pred CC
Confidence 64
No 92
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.4e-36 Score=285.03 Aligned_cols=308 Identities=27% Similarity=0.308 Sum_probs=253.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++...+. +.+++.+.|+++++||+||+.++++|+.|+....+.+.. ..|.++|+|++|+|+.+|+++..|
T Consensus 1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~ 74 (343)
T cd08236 1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDL 74 (343)
T ss_pred CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcC
Confidence 68899987653 788999999999999999999999999999988776522 357889999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++++. ..|+|++|+.++.+.++++|+++++++++++ ..+++||+++.
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~ 153 (343)
T cd08236 75 AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR 153 (343)
T ss_pred CCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH
Confidence 99999998721 2589999999999999999999999999888 57889999996
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g 260 (378)
...+.++++|+|+|+ |.+|++++|+|+++|++ +++++ .++++.+.++++|++.+++++.....++.+..++.+
T Consensus 154 -~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (343)
T cd08236 154 -LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVD----IDDEKLAVARELGADDTINPKEEDVEKVRELTEGRG 227 (343)
T ss_pred -hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCC
Confidence 688999999999975 99999999999999998 87777 467788888899999999887654566777777765
Q ss_pred CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCcc---ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064 261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPIT---VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336 (378)
Q Consensus 261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (378)
+|++|||.|+ .....++++++++|+++.+|.... ... .+...++.+++++.++..... .+ ...+.++++
T Consensus 228 -~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~ 300 (343)
T cd08236 228 -ADLVIEAAGSPATIEQALALARPGGKVVLVGIPYG-DVTLSEEAFEKILRKELTIQGSWNSYS----AP-FPGDEWRTA 300 (343)
T ss_pred -CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCC-CcccccCCHHHHHhcCcEEEEEeeccc----cc-cchhhHHHH
Confidence 9999999986 456889999999999999985532 211 123345678999988865322 11 234567888
Q ss_pred HHHHHcCCccc--c-ceeeccccHHHHHHHHHc-cCCCCCceEe
Q 017064 337 LCLAREGKLKY--D-MELVPFNNFQTALSKALG-LHGSQPKQVI 376 (378)
Q Consensus 337 ~~~l~~g~~~~--~-~~~~~l~~~~~a~~~~~~-~~~~g~kvvv 376 (378)
.++++++.+++ . ...+++++++++++.+.+ ++..+ |+|+
T Consensus 301 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~v~ 343 (343)
T cd08236 301 LDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSG-KVLL 343 (343)
T ss_pred HHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCee-EEeC
Confidence 99999999862 2 467999999999999998 55666 8875
No 93
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=3.8e-36 Score=279.25 Aligned_cols=323 Identities=24% Similarity=0.301 Sum_probs=267.2
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
|+++.+..++.+.. +.+.+.+.|.+.+++|+|+|.++++|+.|+....+.++....+|..+|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 1 MKAIEITEPGGPEV-LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred CceEEEccCCCccc-ceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCC
Confidence 57888777665543 67777777778999999999999999999988877654333457899999999999999999999
Q ss_pred CCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHH
Q 017064 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (378)
Q Consensus 128 ~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~ 207 (378)
++||+|++... .|++++|+.++.+.++++|+++++.+++++++++.++|+++.....+.+|++++|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~ 158 (325)
T TIGR02824 80 KVGDRVCALVA-GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ 158 (325)
T ss_pred CCCCEEEEccC-CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHH
Confidence 99999998753 38999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCE
Q 017064 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGT 286 (378)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~ 286 (378)
++++.|++++++. .++++.+.++++|++.+++.... ....+.+..++.+ +|++++|+|+.....++++++++|+
T Consensus 159 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~g~ 233 (325)
T TIGR02824 159 LAKAFGARVFTTA----GSDEKCAACEALGADIAINYREEDFVEVVKAETGGKG-VDVILDIVGGSYLNRNIKALALDGR 233 (325)
T ss_pred HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCC-eEEEEECCchHHHHHHHHhhccCcE
Confidence 9999999999888 46777778888999888876653 3455776666555 9999999998878899999999999
Q ss_pred EEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHH
Q 017064 287 MVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKAL 365 (378)
Q Consensus 287 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~ 365 (378)
++.+|........+++..++.+++++.+...........+......+.+++++++++.+++. +..|++++++++++.+.
T Consensus 234 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 313 (325)
T TIGR02824 234 IVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALME 313 (325)
T ss_pred EEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHH
Confidence 99998543222344555566899999998865422222334456677888999999988764 56799999999999999
Q ss_pred ccCCCCCceEeeC
Q 017064 366 GLHGSQPKQVIKF 378 (378)
Q Consensus 366 ~~~~~g~kvvv~~ 378 (378)
+++..+ |+++++
T Consensus 314 ~~~~~~-~~v~~~ 325 (325)
T TIGR02824 314 SGDHIG-KIVLTV 325 (325)
T ss_pred hCCCcc-eEEEeC
Confidence 888888 999875
No 94
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.6e-36 Score=279.04 Aligned_cols=322 Identities=29% Similarity=0.389 Sum_probs=269.4
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++.+...+.+.. +.+.+.+.|.+.+++|+|+|.++++|+.|.....+..+....+|..+|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 1 MRAVRFHQFGGPEV-LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred CeEEEEeccCCcce-eEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcC
Confidence 57888887665544 77888888889999999999999999999988877655444457889999999999999999999
Q ss_pred CCCCEEeeCCC----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064 128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (378)
Q Consensus 128 ~~Gd~V~~~~~----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~ 203 (378)
++||+|+++.. ..|++++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.++++++|+|++|++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~ 159 (328)
T cd08268 80 AVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL 159 (328)
T ss_pred CCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence 99999998743 24889999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcc
Q 017064 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 282 (378)
Q Consensus 204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~ 282 (378)
+++++++..|+++++++ .+.++.+.++++|++.+++.+... ...+...+.+.+ +|++++++|+.....++++++
T Consensus 160 ~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~ 234 (328)
T cd08268 160 AAIQIANAAGATVIATT----RTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKG-VDVVFDPVGGPQFAKLADALA 234 (328)
T ss_pred HHHHHHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCC-ceEEEECCchHhHHHHHHhhc
Confidence 99999999999999888 467778888889998888877644 345666666655 999999999988889999999
Q ss_pred cCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHH
Q 017064 283 QGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTAL 361 (378)
Q Consensus 283 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~ 361 (378)
++|+++.+|........++....+.+++++.+....... .++......++.+.+++.++.+.+. +..|+++++.+++
T Consensus 235 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (328)
T cd08268 235 PGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAH 312 (328)
T ss_pred cCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHH
Confidence 999999998544322334444457889999888765432 3455666788888888988888765 5679999999999
Q ss_pred HHHHccCCCCCceEeeC
Q 017064 362 SKALGLHGSQPKQVIKF 378 (378)
Q Consensus 362 ~~~~~~~~~g~kvvv~~ 378 (378)
+.+.+++..+ |+|+++
T Consensus 313 ~~~~~~~~~~-~vv~~~ 328 (328)
T cd08268 313 RYLESGQQIG-KIVVTP 328 (328)
T ss_pred HHHHcCCCCc-eEEEeC
Confidence 9999888888 999874
No 95
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.2e-36 Score=283.35 Aligned_cols=298 Identities=27% Similarity=0.373 Sum_probs=242.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++..++ .. .+++.+.+.|+++++||+||+.++++|++|+....+. .. ..+|.++|||++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (325)
T cd08264 1 MKALVFEKSG-IE-NLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVEEVGDHVKGV 76 (325)
T ss_pred CeeEEeccCC-CC-ceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEEEECCCCCCC
Confidence 6888887665 32 3888888888899999999999999999999887642 21 1357789999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++.+. ..|+|++|++++.+.++++|+++++++++.+++++.+||+++.
T Consensus 77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~ 156 (325)
T cd08264 77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK 156 (325)
T ss_pred CCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 99999997632 2489999999999999999999999999999999999999997
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
. +++++|++|+|+|++|++|++++++|+++|++++++++ .+.++++|++++++.++. .+.+++++ + +
T Consensus 157 ~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~--------~~~~~~~g~~~~~~~~~~-~~~l~~~~-~--~ 223 (325)
T cd08264 157 T-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEV-EEKVKEIT-K--M 223 (325)
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH--------HHHHHHhCCCeeecchHH-HHHHHHHh-C--C
Confidence 6 89999999999999999999999999999999887762 256678999999887643 34566666 2 4
Q ss_pred CcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHH
Q 017064 262 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 341 (378)
Q Consensus 262 ~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (378)
+|+++|++|+..+..++++++++|+++.+|........++...++.++.++.+...+ .++.++++++++.
T Consensus 224 ~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~ 293 (325)
T cd08264 224 ADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG----------TRKELLELVKIAK 293 (325)
T ss_pred CCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC----------CHHHHHHHHHHHH
Confidence 999999999887899999999999999998643223445556666777787776432 1245777778886
Q ss_pred cCCccccceeeccccHHHHHHHHHccCCCCCce
Q 017064 342 EGKLKYDMELVPFNNFQTALSKALGLHGSQPKQ 374 (378)
Q Consensus 342 ~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kv 374 (378)
...+ ...+.|+++++++|++.+.+++..+ |+
T Consensus 294 ~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~-kv 324 (325)
T cd08264 294 DLKV-KVWKTFKLEEAKEALKELFSKERDG-RI 324 (325)
T ss_pred cCCc-eeEEEEcHHHHHHHHHHHHcCCCcc-cc
Confidence 4442 2356799999999999999888776 65
No 96
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-36 Score=281.88 Aligned_cols=313 Identities=26% Similarity=0.338 Sum_probs=253.9
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
|++.+...+.+.+ +++.+.+.|.+.+++|+|++.++++|++|+....|..+....+|.++|||++|+|+.+|+++..|+
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 2 REVVVTRRGGPEV-LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred eeEEEccCCCccc-EEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 7888888887766 889999999999999999999999999999988887654334688999999999999999999999
Q ss_pred CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHH
Q 017064 129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (378)
Q Consensus 129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~l 208 (378)
+||+|++... .|+|++|++++.+.++++|+++++.+++.+++++.+||+++.+.+.+.+|++|+|+|++|++|++++++
T Consensus 81 ~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~ 159 (331)
T cd08273 81 VGDRVAALTR-VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLEL 159 (331)
T ss_pred CCCEEEEeCC-CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 9999999754 389999999999999999999999999999999999999998878899999999999999999999999
Q ss_pred HHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEE
Q 017064 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288 (378)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v 288 (378)
|++.|++|++++ . +++.+.++++|++.+ +....+..+. ...++ ++|+++||+|+.....++++++++|+++
T Consensus 160 a~~~g~~v~~~~----~-~~~~~~~~~~g~~~~-~~~~~~~~~~-~~~~~--~~d~vl~~~~~~~~~~~~~~l~~~g~~v 230 (331)
T cd08273 160 ALLAGAEVYGTA----S-ERNHAALRELGATPI-DYRTKDWLPA-MLTPG--GVDVVFDGVGGESYEESYAALAPGGTLV 230 (331)
T ss_pred HHHcCCEEEEEe----C-HHHHHHHHHcCCeEE-cCCCcchhhh-hccCC--CceEEEECCchHHHHHHHHHhcCCCEEE
Confidence 999999998888 4 777888888997653 4433222211 33332 4999999999988889999999999999
Q ss_pred EEecCCCCCc-cccc--------------hhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceee
Q 017064 289 TYGGMSKKPI-TVST--------------SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELV 352 (378)
Q Consensus 289 ~~g~~~~~~~-~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~ 352 (378)
.+|.....+. .+.. .....+++++.+... + ...++....+.++.+++++++|.+++. .+.|
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~ 307 (331)
T cd08273 231 CYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--D-RAEDPKLFRQDLTELLDLLAKGKIRPKIAKRL 307 (331)
T ss_pred EEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--h-cccCHHHHHHHHHHHHHHHHCCCccCCcceEE
Confidence 9985543221 1111 111223333333322 1 223455667889999999999999875 5689
Q ss_pred ccccHHHHHHHHHccCCCCCceEe
Q 017064 353 PFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 353 ~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
++++++++++.+.+++..| |+|+
T Consensus 308 ~~~~~~~a~~~~~~~~~~g-kvv~ 330 (331)
T cd08273 308 PLSEVAEAHRLLESGKVVG-KIVL 330 (331)
T ss_pred cHHHHHHHHHHHHcCCCcc-eEEe
Confidence 9999999999999888888 8875
No 97
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.3e-36 Score=282.76 Aligned_cols=306 Identities=22% Similarity=0.297 Sum_probs=247.2
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
||++++..+++ +.+.+.|.|.+ +++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|+++..
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~ 74 (345)
T cd08287 1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTS 74 (345)
T ss_pred CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCc
Confidence 68889987664 88999999986 9999999999999999999988876653 35789999999999999999999
Q ss_pred CCCCCEEee-CCC-------------------------CCcccccceeccCC--ceEEcCCCCCHhhhh-----hccccH
Q 017064 127 LAPGDWVIP-SPP-------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAA-----TIIVNP 173 (378)
Q Consensus 127 ~~~Gd~V~~-~~~-------------------------~~G~~~~~~~~~~~--~~~~iP~~~~~~~aa-----~~~~~~ 173 (378)
+++||+|++ ... ..|+|++|+.++.+ .++++|++++++.+. ++...+
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~ 154 (345)
T cd08287 75 VKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVM 154 (345)
T ss_pred cCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHH
Confidence 999999987 211 12889999999975 999999999983222 122457
Q ss_pred HHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHH
Q 017064 174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNV 252 (378)
Q Consensus 174 ~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i 252 (378)
.+||+++. .+++.+|++|+|.|+ |++|++++|+|+++|++++++++ .++++.+.++++|++++++++... .+.+
T Consensus 155 ~~a~~~~~-~~~~~~g~~vlI~g~-g~vg~~~~~lak~~G~~~v~~~~---~~~~~~~~~~~~ga~~v~~~~~~~~~~~i 229 (345)
T cd08287 155 GTGHHAAV-SAGVRPGSTVVVVGD-GAVGLCAVLAAKRLGAERIIAMS---RHEDRQALAREFGATDIVAERGEEAVARV 229 (345)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHcCCceEecCCcccHHHHH
Confidence 88999885 588999999999874 99999999999999997555553 366788888999999999987653 4667
Q ss_pred HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064 253 KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 331 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (378)
.+.+++.+ +|+++|++|+ ..+..++++++++|+++.+|.... ...++....+.+++++.+... ...+
T Consensus 230 ~~~~~~~~-~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~ 297 (345)
T cd08287 230 RELTGGVG-ADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPA----------PVRR 297 (345)
T ss_pred HHhcCCCC-CCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecC----------CcHH
Confidence 77777666 9999999986 466899999999999999985542 334454456778999887432 2345
Q ss_pred HHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 332 MIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 332 ~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.++++++++.++.+++ .++.|+++++++|++.+.+.+. . |++|+.
T Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~-k~~~~~ 345 (345)
T cd08287 298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-I-KVLLRP 345 (345)
T ss_pred HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-e-EEEeCC
Confidence 7888999999999986 3467999999999999887654 3 999863
No 98
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.5e-36 Score=281.92 Aligned_cols=293 Identities=25% Similarity=0.356 Sum_probs=236.3
Q ss_pred eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhc-ccCCC-CCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC---
Q 017064 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--- 137 (378)
Q Consensus 63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--- 137 (378)
+.+++.+.|.++++||+|||.++++|++|..... +..+. ...+|.++|+|++|+|+++|+++++|++||+|++.+
T Consensus 9 ~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~ 88 (339)
T cd08232 9 LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRP 88 (339)
T ss_pred eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCc
Confidence 8899999999999999999999999999988763 32211 113577899999999999999999999999998731
Q ss_pred ----------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCC
Q 017064 138 ----------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSG 189 (378)
Q Consensus 138 ----------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g 189 (378)
...|+|++|++++.+.++++|+++++++|+. ..++++||+++.....+ +|
T Consensus 89 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~ 166 (339)
T cd08232 89 CGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AG 166 (339)
T ss_pred CCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CC
Confidence 1248999999999999999999999999876 56788999999876666 99
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 268 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~ 268 (378)
++|||.|+ |++|++++|+|+++|+ +++++. .++++.+.++++|+++++++++.+ +.....+.+++|+++||
T Consensus 167 ~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~----~s~~~~~~~~~~g~~~vi~~~~~~---~~~~~~~~~~vd~vld~ 238 (339)
T cd08232 167 KRVLVTGA-GPIGALVVAAARRAGAAEIVATD----LADAPLAVARAMGADETVNLARDP---LAAYAADKGDFDVVFEA 238 (339)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCCEEEcCCchh---hhhhhccCCCccEEEEC
Confidence 99999875 8999999999999999 666665 467777888899999999877644 22333222349999999
Q ss_pred CCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc
Q 017064 269 VGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY 347 (378)
Q Consensus 269 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 347 (378)
.|+ ..++.++++|+++|+++.+|... .+...++..++.+++++.+... ..+.+++++++++++.+++
T Consensus 239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~ 306 (339)
T cd08232 239 SGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFR-----------FDDEFAEAVRLLAAGRIDV 306 (339)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEec-----------CHHHHHHHHHHHHcCCCCc
Confidence 996 56789999999999999998543 2333344445668888877642 1245778889999998864
Q ss_pred c---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 348 D---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 348 ~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
. .+.|++++++++++.+.+++..| |+|+++
T Consensus 307 ~~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvv~~ 339 (339)
T cd08232 307 RPLITAVFPLEEAAEAFALAADRTRSV-KVQLSF 339 (339)
T ss_pred hhheeEEecHHHHHHHHHHHHhCCCce-eEEEeC
Confidence 3 46799999999999999888888 999975
No 99
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.9e-36 Score=279.72 Aligned_cols=301 Identities=25% Similarity=0.345 Sum_probs=247.2
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.+++. +.+.+.+.|++.++||+|||+++++|+.|+....|.++. .+|.++|+|++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~~vG~~v~~~ 74 (334)
T cd08234 1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVVAVGSKVTGF 74 (334)
T ss_pred CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEEEeCCCCCCC
Confidence 68898887763 889999999999999999999999999999998887654 367899999999999999999999
Q ss_pred CCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
++||+|++... ..|+|++|++++.++++++|+++++.+++.+ ..+.++++++
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l- 152 (334)
T cd08234 75 KVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL- 152 (334)
T ss_pred CCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-
Confidence 99999987211 2489999999999999999999999998876 6788999998
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g 260 (378)
..+++.+|++|||+|+ |.+|++++++|+++|++ ++++. .++++.+.++++|++.+++.+......- +.+.+.+
T Consensus 153 ~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 226 (334)
T cd08234 153 DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAE----PNEEKLELAKKLGATETVDPSREDPEAQ-KEDNPYG 226 (334)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCeEEecCCCCCHHHH-HHhcCCC
Confidence 6689999999999975 99999999999999998 66665 4778888889999998888766543222 4445544
Q ss_pred CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCC-CCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064 261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338 (378)
Q Consensus 261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (378)
+|++|||+|. .....++++++++|+++.+|.... ...+++...++.+++++.+.... .+.++++++
T Consensus 227 -vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 294 (334)
T cd08234 227 -FDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-----------PYTFPRAIA 294 (334)
T ss_pred -CcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-----------HHHHHHHHH
Confidence 9999999985 456889999999999999985443 22334444455578888776431 245788889
Q ss_pred HHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 339 LAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 339 ~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+++++.+++. ..+|++++++++++.+.+ ...+ |+|+
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~-k~vi 333 (334)
T cd08234 295 LLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGAL-KVVV 333 (334)
T ss_pred HHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCce-EEEe
Confidence 9999998753 467999999999999998 7777 8886
No 100
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5.5e-36 Score=280.77 Aligned_cols=307 Identities=22% Similarity=0.269 Sum_probs=243.4
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC-C-CCCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-P-VRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
||++.+.+++.. +++.+.|.|.++++||+||+.++++|++|+.++.+.. . ....+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~ 77 (341)
T PRK05396 1 MKALVKLKAEPG---LWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT 77 (341)
T ss_pred CceEEEecCCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence 688888877642 8999999999999999999999999999999766532 1 1124678899999999999999999
Q ss_pred CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064 126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (378)
Q Consensus 126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~ 179 (378)
.+++||+|++.+. ..|+|++|+.++.++++++|+++++.+++.+ ..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~ 156 (341)
T PRK05396 78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT 156 (341)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence 9999999998621 2489999999999999999999999988755 456666665
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhc
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLA 257 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~ 257 (378)
+.. ...+|++|+|.|+ |++|++++|+|+++|++ ++++. .++++.+.++++|+++++++++.+ .+.++++++
T Consensus 157 ~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T PRK05396 157 ALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITD----VNEYRLELARKMGATRAVNVAKEDLRDVMAELGM 229 (341)
T ss_pred HHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHhCCcEEecCccccHHHHHHHhcC
Confidence 533 3468999999875 99999999999999995 55553 477888899999999999887654 355667776
Q ss_pred CCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064 258 NLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336 (378)
Q Consensus 258 ~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (378)
+.+ +|++|||.|+ ..++.++++++++|+++.+|... ...+++...+..+++++.++.... ..+.+..+
T Consensus 230 ~~~-~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~ 298 (341)
T PRK05396 230 TEG-FDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPP-GDMAIDWNKVIFKGLTIKGIYGRE---------MFETWYKM 298 (341)
T ss_pred CCC-CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCCcccHHHHhhcceEEEEEEccC---------ccchHHHH
Confidence 655 9999999986 45688999999999999998543 233444566777888887764211 11345567
Q ss_pred HHHHHcC-Ccccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 337 LCLAREG-KLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 337 ~~~l~~g-~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++.++ ++.+. .+.|+++++++|++.+.+++ .| |+|++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~g-k~vv~~ 340 (341)
T PRK05396 299 SALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SG-KVILDW 340 (341)
T ss_pred HHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-Cc-eEEEec
Confidence 7888888 34433 46799999999999999877 77 999976
No 101
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7.7e-36 Score=278.41 Aligned_cols=300 Identities=25% Similarity=0.313 Sum_probs=245.0
Q ss_pred cceEEEcccCCCc-cceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
|+++++..++++. +.+.+.+.+.|.++++||+||+.++++|++|+....|..+. ...|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 6888888887431 12777888888899999999999999999999998887654 246889999999999999999999
Q ss_pred CCCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064 127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (378)
Q Consensus 127 ~~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~ 179 (378)
+++||+|++.+. ..|+|++|++++.+.++++|+++++.+++.+++++.|||++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 999999986210 14889999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCC
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~ 259 (378)
+ ..++++++++|+|+|+ |++|++++++|++.|+++++++ .++++.+.++++|++++++.+.. .+.
T Consensus 160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~---------~~~ 224 (329)
T cd08298 160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFT----RSGEHQELARELGADWAGDSDDL---------PPE 224 (329)
T ss_pred H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEc----CChHHHHHHHHhCCcEEeccCcc---------CCC
Confidence 9 6799999999999985 9999999999999999999888 46788888899999888876542 222
Q ss_pred CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064 260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338 (378)
Q Consensus 260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (378)
+ +|+++++.+. .....++++++++|+++.+|........++.. .+.++..+.+.... ..+.++.+++
T Consensus 225 ~-vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~----------~~~~~~~~~~ 292 (329)
T cd08298 225 P-LDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANL----------TRQDGEEFLK 292 (329)
T ss_pred c-ccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCC----------CHHHHHHHHH
Confidence 3 9999998664 55689999999999999887432111112222 23456666665321 2245778889
Q ss_pred HHHcCCccccceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 339 LAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 339 ~l~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+++++.+++.++.|+++++++|++.+.+++..| |+|+
T Consensus 293 l~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-~~v~ 329 (329)
T cd08298 293 LAAEIPIKPEVETYPLEEANEALQDLKEGRIRG-AAVL 329 (329)
T ss_pred HHHcCCCCceEEEEeHHHHHHHHHHHHcCCCcc-eeeC
Confidence 999999887778899999999999999999998 8874
No 102
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1e-36 Score=286.72 Aligned_cols=320 Identities=28% Similarity=0.299 Sum_probs=245.3
Q ss_pred cceEEEcccCCCccceEEeeeCCCCC-CCCcEEEEEEeeccChhhhhhhcccCC--------------CCCCCCccCCCc
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------------VRPKVPAVGGYE 112 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e 112 (378)
||++++..++++.+++++++.+.|.| +++||+|||.++++|++|.....|... ...+.|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 68888888887654578889999988 599999999999999999998877421 012458899999
Q ss_pred eeEEEEEecCCCCCCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCC--
Q 017064 113 GVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-- 188 (378)
Q Consensus 113 ~~G~V~~vG~~v~~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-- 188 (378)
++|+|+.+|++++++++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.+.+.+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 99999999999999999999998652 25899999999999999999999999999999999999999988777754
Q ss_pred --CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 189 --GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 189 --g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
|++|+|+|++|++|++++++|+++|++|+++++ + ++.+.++++|++++++....... ..++.+. ++|++|
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~----~-~~~~~~~~~g~~~~~~~~~~~~~--~~l~~~~-~vd~vi 232 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS----T-DAIPLVKSLGADDVIDYNNEDFE--EELTERG-KFDVIL 232 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC----c-chHHHHHHhCCceEEECCChhHH--HHHHhcC-CCCEEE
Confidence 999999999999999999999999999988772 2 46678888999998887653321 2222333 499999
Q ss_pred eCCCCccHHHHHHhcccCCEEEEEecCCCCCc---cccchhhhhcCceEEEEechhhhc-----cccHHHHHHHHHHHHH
Q 017064 267 NCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI---TVSTSAFIFKDLSLKGFWLQKWLS-----SEKATECRNMIDYLLC 338 (378)
Q Consensus 267 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 338 (378)
|++|+.....++++++++|+++.+|....... .+.... +..++++.......... ..........+.++++
T Consensus 233 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
T cd08248 233 DTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGM-LKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK 311 (350)
T ss_pred ECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchh-hhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence 99999888899999999999999985432111 010000 00111110000000000 0000112467888999
Q ss_pred HHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEee
Q 017064 339 LAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 339 ~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
++++|.+.+. ++.|++++++++++.+.+++..+ |++++
T Consensus 312 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~vv~~ 350 (350)
T cd08248 312 LVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARG-KTVIK 350 (350)
T ss_pred HHhCCCEecccceeecHHHHHHHHHHHhcCCCce-EEEeC
Confidence 9999998865 56899999999999999888877 88874
No 103
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-35 Score=279.00 Aligned_cols=294 Identities=24% Similarity=0.289 Sum_probs=239.6
Q ss_pred eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhccc-CCCC-CCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC---
Q 017064 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--- 137 (378)
Q Consensus 63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--- 137 (378)
+.+++.+.|.+.++||+|||.++++|+.|...+.+. .+.. ...|.++|+|++|+|+++|++++++++||+|++.+
T Consensus 10 ~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 89 (343)
T cd05285 10 LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVP 89 (343)
T ss_pred eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccC
Confidence 888999999999999999999999999999876422 2111 13567899999999999999999999999998621
Q ss_pred ------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEE
Q 017064 138 ------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIV 193 (378)
Q Consensus 138 ------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~Vl 193 (378)
...|+|++|++++++.++++|+++++.+++.+ .++.+||+++ ..+++++|++||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vl 167 (343)
T cd05285 90 CRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVL 167 (343)
T ss_pred CCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEE
Confidence 12489999999999999999999999999877 4788899987 669999999999
Q ss_pred EeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc----HHHHHHHhcCCCCCcEEEeC
Q 017064 194 QNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLANLPEPALGFNC 268 (378)
Q Consensus 194 V~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~----~~~i~~~~~~~g~~Dvvid~ 268 (378)
|+|+ |++|++++|+|+++|++ +++++ .++++.+.++++|++++++.++.+ .+.+.+.+++.+ +|++|||
T Consensus 168 I~g~-g~vG~~a~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~-~d~vld~ 241 (343)
T cd05285 168 VFGA-GPIGLLTAAVAKAFGATKVVVTD----IDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG-PDVVIEC 241 (343)
T ss_pred EECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC-CCEEEEC
Confidence 9876 89999999999999998 66666 467888888999999999887654 566777777755 9999999
Q ss_pred CCCc-cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc
Q 017064 269 VGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY 347 (378)
Q Consensus 269 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 347 (378)
+|+. ..+.++++++++|+++.+|.... ...++......+++++.++... .+.+++++++++++.+++
T Consensus 242 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~ 309 (343)
T cd05285 242 TGAESCIQTAIYATRPGGTVVLVGMGKP-EVTLPLSAASLREIDIRGVFRY-----------ANTYPTAIELLASGKVDV 309 (343)
T ss_pred CCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHhhCCcEEEEeccC-----------hHHHHHHHHHHHcCCCCc
Confidence 9986 67899999999999999985432 2334444566677877775421 156778889999998753
Q ss_pred ---cceeeccccHHHHHHHHHccCC-CCCceEee
Q 017064 348 ---DMELVPFNNFQTALSKALGLHG-SQPKQVIK 377 (378)
Q Consensus 348 ---~~~~~~l~~~~~a~~~~~~~~~-~g~kvvv~ 377 (378)
..+.|+++++.+|++.+.+++. .+ |++|.
T Consensus 310 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~-k~~~~ 342 (343)
T cd05285 310 KPLITHRFPLEDAVEAFETAAKGKKGVI-KVVIE 342 (343)
T ss_pred hHhEEEEEeHHHHHHHHHHHHcCCCCee-EEEEe
Confidence 2467999999999999998753 46 99873
No 104
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1e-35 Score=283.05 Aligned_cols=305 Identities=20% Similarity=0.269 Sum_probs=241.8
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC------CCCCCCCccCCCceeEEEEEec
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVYSVG 121 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG 121 (378)
+...++..+ + +++.++|.|.+++++|+|||.++++|++|+..+.+.. +...++|.++|||++|+|+++|
T Consensus 29 ~~~~~~~~~-~----~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG 103 (384)
T cd08265 29 LGSKVWRYP-E----LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTG 103 (384)
T ss_pred ceeEEEeCC-C----EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEEC
Confidence 455555532 2 8999999999999999999999999999998876321 2223468899999999999999
Q ss_pred CCCCCCCCCCEEeeCC--------------------------CCCcccccceeccCCceEEcCCC-------CCHhhhhh
Q 017064 122 SAVTRLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKD-------SPMEYAAT 168 (378)
Q Consensus 122 ~~v~~~~~Gd~V~~~~--------------------------~~~G~~~~~~~~~~~~~~~iP~~-------~~~~~aa~ 168 (378)
++++.|++||+|++.+ ...|+|++|+.++++.++++|++ +++. +++
T Consensus 104 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~ 182 (384)
T cd08265 104 KNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGA 182 (384)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-Hhh
Confidence 9999999999998621 11489999999999999999986 3455 556
Q ss_pred ccccHHHHHHHHHHH-hccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 169 IIVNPLTALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 169 ~~~~~~ta~~~l~~~-~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
++.++++||+++... +++++|++|+|+|+ |++|++++|+|+++|+ +++++. .++++.+.++++|+++++++++
T Consensus 183 ~~~~~~ta~~al~~~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~----~~~~~~~~~~~~g~~~~v~~~~ 257 (384)
T cd08265 183 LVEPTSVAYNGLFIRGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFE----ISEERRNLAKEMGADYVFNPTK 257 (384)
T ss_pred hhhHHHHHHHHHHhhcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEEcccc
Confidence 667889999999665 68999999999965 9999999999999999 577776 4667888999999999998764
Q ss_pred ----ccHHHHHHHhcCCCCCcEEEeCCCCc--cHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhh
Q 017064 247 ----LEVKNVKGLLANLPEPALGFNCVGGN--SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKW 320 (378)
Q Consensus 247 ----~~~~~i~~~~~~~g~~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (378)
.+...+++++++.+ +|+|+||+|++ .+..++++++++|+++.+|.... ...++...+..+..++.+....
T Consensus 258 ~~~~~~~~~v~~~~~g~g-vDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~-- 333 (384)
T cd08265 258 MRDCLSGEKVMEVTKGWG-ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGH-- 333 (384)
T ss_pred cccccHHHHHHHhcCCCC-CCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeecc--
Confidence 23466888887766 99999999964 56889999999999999985432 2333445555667777776421
Q ss_pred hccccHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 321 LSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
.....+++++++++++.+++. ++.|+++++++|++.+.++ ..+ |+|+
T Consensus 334 -------~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-kvvv 383 (384)
T cd08265 334 -------SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDG-KITI 383 (384)
T ss_pred -------CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCc-eEEe
Confidence 122457889999999998863 4679999999999997654 566 8875
No 105
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.3e-35 Score=278.91 Aligned_cols=307 Identities=23% Similarity=0.263 Sum_probs=239.4
Q ss_pred ccceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCC
Q 017064 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAV 124 (378)
Q Consensus 47 ~~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v 124 (378)
+|+++++..++. +++.+.+.|.+.++||+|||.++++|++|+..+.+.... ...+|.++|||++|+|+++|+++
T Consensus 17 ~~~~~~~~~~~~----l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
T PLN02702 17 ENMAAWLVGVNT----LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV 92 (364)
T ss_pred ccceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence 344444444443 788888888899999999999999999999988763211 11257789999999999999999
Q ss_pred CCCCCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHH
Q 017064 125 TRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 177 (378)
Q Consensus 125 ~~~~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~ 177 (378)
++|++||+|++.+ ...|+|++|+.++.+.++++|+++++.++++.. ...++|
T Consensus 93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~ 171 (364)
T PLN02702 93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGV 171 (364)
T ss_pred CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHH
Confidence 9999999998621 114899999999999999999999999988632 355688
Q ss_pred HHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc---ccHHHHHH
Q 017064 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ---LEVKNVKG 254 (378)
Q Consensus 178 ~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~---~~~~~i~~ 254 (378)
+++ ...++.+|++|+|+|+ |++|++++|+|+++|++++++++ .++++.+.++++|++.+++.+. ...+.+.+
T Consensus 172 ~~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 246 (364)
T PLN02702 172 HAC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVD---VDDERLSVAKQLGADEIVLVSTNIEDVESEVEE 246 (364)
T ss_pred HHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEEecCcccccHHHHHHH
Confidence 887 5588999999999975 99999999999999998666554 3678888889999999876532 22344444
Q ss_pred H--hcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064 255 L--LANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 331 (378)
Q Consensus 255 ~--~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (378)
+ ..+. ++|++|||+|+ ..+..++++++++|+++.+|.... ...+....+..+++++.+++.. ..
T Consensus 247 ~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~ 313 (364)
T PLN02702 247 IQKAMGG-GIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRY-----------RN 313 (364)
T ss_pred HhhhcCC-CCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccC-----------hH
Confidence 3 2233 49999999995 567899999999999999985433 2334555677789998886532 13
Q ss_pred HHHHHHHHHHcCCccc---cceeecc--ccHHHHHHHHHccCCCCCceEee
Q 017064 332 MIDYLLCLAREGKLKY---DMELVPF--NNFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 332 ~~~~~~~~l~~g~~~~---~~~~~~l--~~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.++.++++++++.+.+ ..+.|++ +++++|++.+.+++..+ |+||.
T Consensus 314 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~-kvv~~ 363 (364)
T PLN02702 314 TWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAI-KVMFN 363 (364)
T ss_pred HHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCce-EEEEe
Confidence 5677889999998863 2456555 79999999999888888 99986
No 106
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1e-35 Score=276.46 Aligned_cols=288 Identities=21% Similarity=0.253 Sum_probs=234.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.++++ +.+++++.|.++++||+|||.++++|++|.....|..+ .|.++|||++|+|+++|++ +
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~ 69 (319)
T cd08242 1 MKALVLDGGLD----LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---E 69 (319)
T ss_pred CeeEEEeCCCc----EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---C
Confidence 68899987553 89999999999999999999999999999999888654 4789999999999999987 6
Q ss_pred CCCCEEeeCC---------------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
++||+|...+ ...|+|++|++++.++++++|+++++++++.+ ....++|..+
T Consensus 70 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~ 148 (319)
T cd08242 70 LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL 148 (319)
T ss_pred CCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence 7999997321 12589999999999999999999999988864 3344566555
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g 260 (378)
...++++|++|||+|+ |.+|++++|+|+.+|+++++++ .++++.+.++++|++.+++++.. +.+.+
T Consensus 149 -~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~ 214 (319)
T cd08242 149 -EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVG----RHSEKLALARRLGVETVLPDEAE--------SEGGG 214 (319)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEeCcccc--------ccCCC
Confidence 5688999999999975 9999999999999999988887 57889999999999988876532 33434
Q ss_pred CCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064 261 EPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 339 (378)
Q Consensus 261 ~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (378)
+|++|||+|+ ..+..++++++++|+++..+... ....++...+..++.++.+.... .+++++++
T Consensus 215 -~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~ 279 (319)
T cd08242 215 -FDVVVEATGSPSGLELALRLVRPRGTVVLKSTYA-GPASFDLTKAVVNEITLVGSRCG-------------PFAPALRL 279 (319)
T ss_pred -CCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC-CCCccCHHHheecceEEEEEecc-------------cHHHHHHH
Confidence 9999999987 45688999999999999876432 23445555667788888876432 16678899
Q ss_pred HHcCCcc--cc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 340 AREGKLK--YD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 340 l~~g~~~--~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++++++ +. .+.|+++++++|++.++++. .+ |+||+.
T Consensus 280 ~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~-k~vi~~ 319 (319)
T cd08242 280 LRKGLVDVDPLITAVYPLEEALEAFERAAEPG-AL-KVLLRP 319 (319)
T ss_pred HHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ce-EEEeCC
Confidence 9999984 33 47899999999999998665 56 999864
No 107
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2.2e-35 Score=275.34 Aligned_cols=310 Identities=25% Similarity=0.323 Sum_probs=248.7
Q ss_pred ceEEEcccCC---CccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCC--CCCccCCCceeEEEEEecCC
Q 017064 49 KAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSA 123 (378)
Q Consensus 49 ~a~~~~~~~~---~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~ 123 (378)
++|.+....+ ..+.+++++.+.|.+.+++|+|||.++++|+.|.....+...... ..+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 5555544431 223488999999999999999999999999988765554321111 12457899999999999964
Q ss_pred CCCCCCCCEEeeCCCCCcccccceeccC-CceEEcCCCCC--Hhhhhh-ccccHHHHHHHHHHHhccCCCCEEEEeCCCc
Q 017064 124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVSKDSP--MEYAAT-IIVNPLTALRMLEDFTTLNSGDSIVQNGATS 199 (378)
Q Consensus 124 v~~~~~Gd~V~~~~~~~G~~~~~~~~~~-~~~~~iP~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g 199 (378)
++++||+|+++ ++|++|+.++. +.++++|++++ +.++++ +++++.|||+++...+.+.++++|||+|++|
T Consensus 83 --~~~~Gd~V~~~----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 156 (329)
T cd05288 83 --DFKVGDLVSGF----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAG 156 (329)
T ss_pred --CCCCCCEEecc----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcc
Confidence 79999999976 57999999999 99999999995 555555 8889999999998878899999999999989
Q ss_pred hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHH
Q 017064 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKV 277 (378)
Q Consensus 200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~ 277 (378)
++|++++|+|++.|+++++++ .++++.+.+++ +|++++++.++. ..+.+.+.++ . ++|++|||+|+..+..+
T Consensus 157 ~ig~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~-~~d~vi~~~g~~~~~~~ 230 (329)
T cd05288 157 AVGSVVGQIAKLLGARVVGIA----GSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-D-GIDVYFDNVGGEILDAA 230 (329)
T ss_pred hHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-C-CceEEEEcchHHHHHHH
Confidence 999999999999999999888 46778888887 999999988764 3455666664 3 49999999999888999
Q ss_pred HHhcccCCEEEEEecCCCCCcc-----ccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-cee
Q 017064 278 LKFLSQGGTMVTYGGMSKKPIT-----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MEL 351 (378)
Q Consensus 278 ~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~ 351 (378)
+++++++|+++.+|........ .+....+.+++++.++....+ .....+.+.++++++.+|.+++. ...
T Consensus 231 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~ 305 (329)
T cd05288 231 LTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDY-----ADRFPEALAELAKWLAEGKLKYREDVV 305 (329)
T ss_pred HHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhh-----HHHHHHHHHHHHHHHHCCCcccccccc
Confidence 9999999999999865433221 224455678899888765432 12345778889999999999865 456
Q ss_pred eccccHHHHHHHHHccCCCCCceEe
Q 017064 352 VPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 352 ~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+++++++++++.+.+++..| |+|+
T Consensus 306 ~~l~~~~~a~~~~~~~~~~g-kvvv 329 (329)
T cd05288 306 EGLENAPEAFLGLFTGKNTG-KLVV 329 (329)
T ss_pred ccHHHHHHHHHHHhcCCCcc-ceeC
Confidence 89999999999999888888 8874
No 108
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3.3e-35 Score=270.42 Aligned_cols=298 Identities=25% Similarity=0.306 Sum_probs=247.5
Q ss_pred CCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC-CCCccccccee
Q 017064 70 PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGTWQSYVV 148 (378)
Q Consensus 70 ~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~G~~~~~~~ 148 (378)
.|.+.+++|+||+.++++|+.|+....+.++..+.+|.++|+|++|+|+++|+++.++++||+|++.. ...|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 46788999999999999999999998887654445688999999999999999999999999999874 23589999999
Q ss_pred ccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH
Q 017064 149 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228 (378)
Q Consensus 149 ~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~ 228 (378)
++.+.++++|+++++++++.++..+++||+++. ...+++|++|+|+++++++|++++|+|+++|+++++++ .+++
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~----~~~~ 156 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATA----SSDD 156 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEc----CCHH
Confidence 999999999999999999999999999999985 58999999999999999999999999999999999888 4677
Q ss_pred HHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCC-ccccchhhh
Q 017064 229 AKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFI 306 (378)
Q Consensus 229 ~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~ 306 (378)
+.+.++++|++.+++....+ ...+.+.+++.+ +|+++|++++.....++++++++|+++.++...... ..+.... +
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~ 234 (303)
T cd08251 157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRG-VDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-L 234 (303)
T ss_pred HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH-h
Confidence 88888999999999877644 456777777666 999999999888889999999999999998543211 1222222 3
Q ss_pred hcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 307 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
.+++.+....+..+.. ..+....+.+.++.+++.+|.+++. ++.|++++++++++.+.+++..+ |+++
T Consensus 235 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~iv~ 303 (303)
T cd08251 235 SNNQSFHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIG-KVVV 303 (303)
T ss_pred hcCceEEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcc-eEeC
Confidence 4556665555433322 2344566778889999999998865 57899999999999999988888 8874
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.6e-35 Score=270.84 Aligned_cols=318 Identities=26% Similarity=0.318 Sum_probs=258.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||++++.+++. .+.+.+++.+.|.+.+++|+|||.++++|+.|+....+..... ..|.++|||++|+|+.+|+++..+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~ 78 (325)
T cd08271 1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGW 78 (325)
T ss_pred CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcC
Confidence 78999998884 1228999999999999999999999999999998877654321 236789999999999999999999
Q ss_pred CCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064 128 APGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205 (378)
Q Consensus 128 ~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a 205 (378)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+.+.+.+|++|+|+|+++++|+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~ 158 (325)
T cd08271 79 KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFA 158 (325)
T ss_pred CCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHH
Confidence 99999998751 1489999999999999999999999999999999999999998888999999999999989999999
Q ss_pred HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccC
Q 017064 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG 284 (378)
Q Consensus 206 v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~ 284 (378)
+++|++.|+++++++ ++++.+.+..+|++.+++..... ...+++.+++.+ +|++++|+++......+++++++
T Consensus 159 ~~~a~~~g~~v~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~ 232 (325)
T cd08271 159 VQLAKRAGLRVITTC-----SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRG-VDAVLDTVGGETAAALAPTLAFN 232 (325)
T ss_pred HHHHHHcCCEEEEEE-----cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCC-CcEEEECCCcHhHHHHHHhhccC
Confidence 999999999988876 34666788889999998876543 456777777666 99999999998778899999999
Q ss_pred CEEEEEecCCCCCccccchhhhhcCceEEEEechhhhcccc---HHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHH
Q 017064 285 GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEK---ATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTA 360 (378)
Q Consensus 285 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a 360 (378)
|+++.++...... ....+.+++.+....+........ .....+.+.+++++++++.+++. ++.|+++++.++
T Consensus 233 G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 308 (325)
T cd08271 233 GHLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEA 308 (325)
T ss_pred CEEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHH
Confidence 9999987443221 112233445554444322211111 13456778889999999998764 578999999999
Q ss_pred HHHHHccCCCCCceEeeC
Q 017064 361 LSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 361 ~~~~~~~~~~g~kvvv~~ 378 (378)
++.+.+++..+ |+++++
T Consensus 309 ~~~~~~~~~~~-kiv~~~ 325 (325)
T cd08271 309 LRALKDRHTRG-KIVVTI 325 (325)
T ss_pred HHHHHcCCccc-eEEEEC
Confidence 99999888888 999874
No 110
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.5e-35 Score=273.35 Aligned_cols=302 Identities=26% Similarity=0.305 Sum_probs=250.1
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
|++++.+++.. +++.+.|.|.+.+++|+|++.++++|++|.....|..+. ..+|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~ 76 (330)
T cd08245 1 KAAVVHAAGGP---LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRK 76 (330)
T ss_pred CeEEEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCcccc
Confidence 57778777543 889999999999999999999999999999998886643 24678999999999999999999999
Q ss_pred CCCEEeeCC--------------------------C-CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHH
Q 017064 129 PGDWVIPSP--------------------------P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (378)
Q Consensus 129 ~Gd~V~~~~--------------------------~-~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~ 181 (378)
+||+|+..+ . ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 77 VGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred cCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999998421 0 2488999999999999999999999999999999999999997
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCC
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
. ..+.++++|||+|+ |++|++++++|+++|++|++++ .++++.+.++++|++.+++....+... . .. . +
T Consensus 157 ~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-~~-~-~ 225 (330)
T cd08245 157 D-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAIT----RSPDKRELARKLGADEVVDSGAELDEQ--A-AA-G-G 225 (330)
T ss_pred h-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhCCcEEeccCCcchHH--h-cc-C-C
Confidence 6 78999999999976 7799999999999999999888 477888888899999998766543211 1 22 2 4
Q ss_pred CcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHH
Q 017064 262 PALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 340 (378)
Q Consensus 262 ~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 340 (378)
+|++|||++. .....++++++++|+++.++.........+...++.++.++.++.... ...++++++++
T Consensus 226 ~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll 295 (330)
T cd08245 226 ADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG----------RADLQEALDFA 295 (330)
T ss_pred CCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC----------HHHHHHHHHHH
Confidence 9999999875 566889999999999999985433333333445667888888775431 25677888999
Q ss_pred HcCCccccceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 341 REGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 341 ~~g~~~~~~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
.++.+++.++.|+++++.++++.+.+++..+ |+|+
T Consensus 296 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~-~~v~ 330 (330)
T cd08245 296 AEGKVKPMIETFPLDQANEAYERMEKGDVRF-RFVL 330 (330)
T ss_pred HcCCCcceEEEEcHHHHHHHHHHHHcCCCCc-ceeC
Confidence 9999987778899999999999999999888 8875
No 111
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.4e-35 Score=271.83 Aligned_cols=296 Identities=21% Similarity=0.227 Sum_probs=241.8
Q ss_pred eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhh-cccCCCC-CCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCC
Q 017064 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS 140 (378)
Q Consensus 63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 140 (378)
+++.+++.|.+.++||+|++.++++|+.|+..+ .|..+.. +..|.++|+|++|+|+.+|+++..+++||+|++...
T Consensus 7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-- 84 (312)
T cd08269 7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSG-- 84 (312)
T ss_pred eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecC--
Confidence 888999999999999999999999999999887 6654322 124788999999999999999999999999998764
Q ss_pred cccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEE
Q 017064 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINI 219 (378)
Q Consensus 141 G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~ 219 (378)
|+|++|+.++.+.++++|+++ ..++....++.++++++. ..++++|++|+|+|+ |++|++++|+|+++|++ ++++
T Consensus 85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~ 160 (312)
T cd08269 85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI 160 (312)
T ss_pred CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence 899999999999999999998 233222256788999887 688999999999975 99999999999999999 8777
Q ss_pred ecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCC
Q 017064 220 IRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKP 297 (378)
Q Consensus 220 ~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~ 297 (378)
. ..+++.++++.+|++++++.+.. ....+.+++++.+ +|+++||.|+. ....++++++++|+++.+|......
T Consensus 161 ~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~ 235 (312)
T cd08269 161 D----RRPARLALARELGATEVVTDDSEAIVERVRELTGGAG-ADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGP 235 (312)
T ss_pred C----CCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCC
Confidence 6 46778888899999999886654 4466777777666 99999999864 5688999999999999998554333
Q ss_pred ccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHHccCC-CCCc
Q 017064 298 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHG-SQPK 373 (378)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~l~~~~~a~~~~~~~~~-~g~k 373 (378)
..+++..+..+++++.++... ++....+.+++++++++++.+++ ..+.|++++++++++.+.+++. .+ |
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~ 308 (312)
T cd08269 236 RPVPFQTWNWKGIDLINAVER------DPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFI-K 308 (312)
T ss_pred cccCHHHHhhcCCEEEEeccc------CccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCce-E
Confidence 444555667788887776432 12234577889999999999886 2467999999999999999875 45 8
Q ss_pred eEe
Q 017064 374 QVI 376 (378)
Q Consensus 374 vvv 376 (378)
+++
T Consensus 309 ~~~ 311 (312)
T cd08269 309 GVI 311 (312)
T ss_pred EEe
Confidence 886
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.8e-35 Score=277.21 Aligned_cols=318 Identities=26% Similarity=0.323 Sum_probs=238.2
Q ss_pred ceEEEcccCCCccceEEeeeCCCC-CCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCC-C
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT-R 126 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~-~ 126 (378)
|++++.+++++.. ++..+.|.|. +++++|+||+.++++|++|+....+........|.++|+|++|+|+++|++++ .
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 2 KALTFKNNTSPLT-ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred ceEEEecCCCcce-eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 6788888887743 4444455553 49999999999999999999877542211112367899999999999999998 8
Q ss_pred CCCCCEEeeCCC----CCcccccceeccCC----ceEEcCCCCCHhhhhhccccHHHHHHHHHHHh-ccCCCCEEEEeCC
Q 017064 127 LAPGDWVIPSPP----SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGA 197 (378)
Q Consensus 127 ~~~Gd~V~~~~~----~~G~~~~~~~~~~~----~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlV~g~ 197 (378)
|++||+|++... ..|+|++|++++.+ .++++|+++++.+++.+++++.|||+++...+ .+++|++|+|+|+
T Consensus 81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga 160 (352)
T cd08247 81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG 160 (352)
T ss_pred CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence 999999998752 14899999999987 79999999999999999999999999998877 7999999999999
Q ss_pred CchHHHHHHHHHHHc-CC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc----HHHHHHHhc-CCCCCcEEEeCCC
Q 017064 198 TSIVGQCIIQIARHR-GI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLA-NLPEPALGFNCVG 270 (378)
Q Consensus 198 ~g~~G~~av~la~~~-g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~----~~~i~~~~~-~~g~~Dvvid~~g 270 (378)
++++|++++++|++. |. +++++. ++++.+.++++|++++++.++.. ..++.+.+. +.+ +|++|||+|
T Consensus 161 ~~~vg~~~~~~a~~~~~~~~v~~~~-----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g 234 (352)
T cd08247 161 STSVGRFAIQLAKNHYNIGTVVGTC-----SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGK-FDLILDCVG 234 (352)
T ss_pred CchHHHHHHHHHHhcCCcceEEEEe-----ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCC-ceEEEECCC
Confidence 999999999999987 45 455554 34445577899999999876543 445555444 444 999999999
Q ss_pred C-ccHHHHHHhcc---cCCEEEEEecCCCCCccc---c-------chhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064 271 G-NSASKVLKFLS---QGGTMVTYGGMSKKPITV---S-------TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336 (378)
Q Consensus 271 ~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (378)
+ .....++++++ ++|+++.++.....+... . ....+.+++++........ . ..+. .+.++.+
T Consensus 235 ~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~~ 310 (352)
T cd08247 235 GYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF-L-LDPN--ADWIEKC 310 (352)
T ss_pred CHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEE-E-ecCC--HHHHHHH
Confidence 8 56688999999 999999875332211110 0 0011222322222211110 0 0111 2567888
Q ss_pred HHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 337 LCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 337 ~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++++.++.+++. .+.|+++++++|++.+++++..| |+|+++
T Consensus 311 ~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~g-kvvi~~ 352 (352)
T cd08247 311 AELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKG-KVVIKV 352 (352)
T ss_pred HHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCC-cEEEeC
Confidence 899999998865 56899999999999999998888 999874
No 113
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.4e-34 Score=268.45 Aligned_cols=320 Identities=27% Similarity=0.361 Sum_probs=263.7
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCC-CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 126 (378)
|+++++..++.+.. +.+.+.+ |.+. +++++|++.++++|+.|+....|.+......|..+|||++|.|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 1 MKAVVCKELGGPED-LVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred CeEEEEecCCCcce-eEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 57888876655443 7777777 7666 5999999999999999999888766443345678999999999999999999
Q ss_pred CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHH
Q 017064 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (378)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av 206 (378)
+++||+|++... .|++++|+.++.+.++++|+++++.+++.+...+.+||+++.....+.++++|+|+|++|++|++++
T Consensus 79 ~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~ 157 (323)
T cd08241 79 FKVGDRVVALTG-QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV 157 (323)
T ss_pred CCCCCEEEEecC-CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence 999999999862 3899999999999999999999999999999899999999987789999999999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCC
Q 017064 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGG 285 (378)
Q Consensus 207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G 285 (378)
++|++.|+++++++ .+.++.+.++++|++.+++....+ .+.+...+++.+ +|.+++|+|+.....++++++++|
T Consensus 158 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~g~~~~~~~~~~~~~~g 232 (323)
T cd08241 158 QLAKALGARVIAAA----SSEEKLALARALGADHVIDYRDPDLRERVKALTGGRG-VDVVYDPVGGDVFEASLRSLAWGG 232 (323)
T ss_pred HHHHHhCCEEEEEe----CCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCC-cEEEEECccHHHHHHHHHhhccCC
Confidence 99999999999888 467788888889998888776643 356777777655 999999999977888999999999
Q ss_pred EEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHH
Q 017064 286 TMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKA 364 (378)
Q Consensus 286 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~ 364 (378)
+++.+|........+.....+.+++++.+.....+.. ..+....+.++++++++.++.+++. +..|++++++++++.+
T Consensus 233 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (323)
T cd08241 233 RLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYAR-REPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRAL 311 (323)
T ss_pred EEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccc-hhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHH
Confidence 9999985432211233434567899999887654422 2344556788889999999988765 5679999999999999
Q ss_pred HccCCCCCceEee
Q 017064 365 LGLHGSQPKQVIK 377 (378)
Q Consensus 365 ~~~~~~g~kvvv~ 377 (378)
.++...+ |++++
T Consensus 312 ~~~~~~~-~vvv~ 323 (323)
T cd08241 312 ADRKATG-KVVLT 323 (323)
T ss_pred HhCCCCC-cEEeC
Confidence 9888887 88864
No 114
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.3e-35 Score=274.06 Aligned_cols=307 Identities=27% Similarity=0.330 Sum_probs=244.1
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccC--CCCCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
||++.+..+++. +.+.+.+.|.++++|++|||.++++|+.|...+.+.. ......|..+|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~ 77 (341)
T cd05281 1 MKAIVKTKAGPG---AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT 77 (341)
T ss_pred CcceEEecCCCc---eEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence 688888877652 8889999999999999999999999999998765431 11123567899999999999999999
Q ss_pred CCCCCCEEeeCCC--------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHH
Q 017064 126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (378)
Q Consensus 126 ~~~~Gd~V~~~~~--------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~ 179 (378)
.+++||+|++.+. ..|+|++|++++.++++++|++++++.+ +++..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~ 156 (341)
T cd05281 78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHT 156 (341)
T ss_pred CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHH
Confidence 9999999988521 2488999999999999999999998554 566678888887
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcC
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~ 258 (378)
+. ....+|++|||+|+ |++|++++|+|+++|+ +++++. .++++.+.++++|++++++.+..+...+.+.+++
T Consensus 157 ~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T cd05281 157 VL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASD----PNPYRLELAKKMGADVVINPREEDVVEVKSVTDG 229 (341)
T ss_pred HH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCcceeeCcccccHHHHHHHcCC
Confidence 75 45678999999876 9999999999999999 577664 4778888889999999988765433377777776
Q ss_pred CCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhhcCceEEEEechhhhccccHHHHHHHHHHH
Q 017064 259 LPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 336 (378)
Q Consensus 259 ~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (378)
.+ +|++|||+|+. ....++++++++|+++.+|.... ...++. ..+..+++++.+.... ...+.+.++
T Consensus 230 ~~-vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 298 (341)
T cd05281 230 TG-VDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGR---------KMFETWYQV 298 (341)
T ss_pred CC-CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecC---------CcchhHHHH
Confidence 55 99999999874 56889999999999999985433 222232 2356678887776421 122456778
Q ss_pred HHHHHcCCcccc---ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 337 LCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 337 ~~~l~~g~~~~~---~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
+++++++.+++. ...+++++++++|+.+.+++ .| |+|++.
T Consensus 299 ~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~g-k~vv~~ 341 (341)
T cd05281 299 SALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CG-KVVLYP 341 (341)
T ss_pred HHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-Cc-eEEecC
Confidence 899999998642 45799999999999999998 88 999864
No 115
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.3e-34 Score=265.49 Aligned_cols=277 Identities=24% Similarity=0.350 Sum_probs=228.8
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 127 (378)
||+++..+.++ ..+.+++++.|++.+++|+|||.++++|++|.....|.+.. ...|.++|+|++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 77 (306)
T cd08258 1 MKALVKTGPGP--GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGW 77 (306)
T ss_pred CeeEEEecCCC--CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcC
Confidence 57777766442 23889999999999999999999999999999988876522 2357889999999999999999999
Q ss_pred CCCCEEeeCCC---------------------------CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHH
Q 017064 128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (378)
Q Consensus 128 ~~Gd~V~~~~~---------------------------~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l 180 (378)
++||+|++... ..|+|++|++++.+.++++|+++++.+++ ++...++||+++
T Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l 156 (306)
T cd08258 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAV 156 (306)
T ss_pred CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHH
Confidence 99999998642 14899999999999999999999999887 677788999999
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCC
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL 259 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~ 259 (378)
...+.+.++++|||.| +|++|++++|+|+++|++|+++... +.+++.+.++++|++++ +++..+ ...+.+..++.
T Consensus 157 ~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 157 AERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTE--KDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 8888999999999977 5999999999999999998776433 35667788899999888 776544 35577766665
Q ss_pred CCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHH
Q 017064 260 PEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 338 (378)
Q Consensus 260 g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (378)
+ +|++|||+|+ .....++++++++|+++.+|........++...++.+++++.|+.+++. ++++++++
T Consensus 233 ~-vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~ 301 (306)
T cd08258 233 G-ADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTP----------ASWETALR 301 (306)
T ss_pred C-CCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCch----------HhHHHHHH
Confidence 5 9999999975 5668899999999999999976533455677778889999999987532 45778888
Q ss_pred HHHcC
Q 017064 339 LAREG 343 (378)
Q Consensus 339 ~l~~g 343 (378)
++++|
T Consensus 302 ~~~~~ 306 (306)
T cd08258 302 LLASG 306 (306)
T ss_pred HHhcC
Confidence 88765
No 116
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3e-34 Score=268.85 Aligned_cols=295 Identities=24% Similarity=0.283 Sum_probs=235.5
Q ss_pred eEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCC--CCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCC---
Q 017064 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--- 137 (378)
Q Consensus 63 ~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--- 137 (378)
+++.+.|.|.++++||+|||.++++|+.|+..+.+... ...++|.++|+|++|+|+.+|++++.+++||+|++..
T Consensus 11 ~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 90 (340)
T TIGR00692 11 AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIV 90 (340)
T ss_pred cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCC
Confidence 78889999999999999999999999999987655311 1113467899999999999999999999999998731
Q ss_pred -----------------------CCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEE
Q 017064 138 -----------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 194 (378)
Q Consensus 138 -----------------------~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV 194 (378)
...|+|++|++++++.++++|++++++++ +++..+.+|++++ ...+.+|++|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI 167 (340)
T TIGR00692 91 CGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLV 167 (340)
T ss_pred CCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEE
Confidence 12489999999999999999999998655 5677888998886 355789999999
Q ss_pred eCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-
Q 017064 195 NGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG- 271 (378)
Q Consensus 195 ~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~- 271 (378)
.|+ |++|++++|+|+++|++ |+++. .++++.+.++++|++.+++....+ .+.+.+.+++.+ +|+++||+|+
T Consensus 168 ~~~-g~vg~~a~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~-~d~vld~~g~~ 241 (340)
T TIGR00692 168 TGA-GPIGLMAIAVAKASGAYPVIVSD----PNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG-VDVFLEMSGAP 241 (340)
T ss_pred ECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCC-CCEEEECCCCH
Confidence 775 99999999999999997 66663 478888888999999998876543 456777766655 9999999886
Q ss_pred ccHHHHHHhcccCCEEEEEecCCCCCccccch-hhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccc--c
Q 017064 272 NSASKVLKFLSQGGTMVTYGGMSKKPITVSTS-AFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--D 348 (378)
Q Consensus 272 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~ 348 (378)
..+...+++++++|+++.+|.... ...++.. .++.+++++.+.... ...+.+.+++++++++.+++ .
T Consensus 242 ~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~ 311 (340)
T TIGR00692 242 KALEQGLQAVTPGGRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITGR---------HMFETWYTVSRLIQSGKLDLDPI 311 (340)
T ss_pred HHHHHHHHhhcCCCEEEEEccCCC-CcccchhhhhhhcceEEEEEecC---------CchhhHHHHHHHHHcCCCChHHh
Confidence 456889999999999999985432 2223333 456677777665411 12245678899999999873 2
Q ss_pred -ceeeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 349 -MELVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 349 -~~~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
++.++++++.++++.+.+++ .| |+|++|
T Consensus 312 ~~~~~~l~~~~~a~~~~~~~~-~g-kvvv~~ 340 (340)
T TIGR00692 312 ITHKFKFDKFEKGFELMRSGQ-TG-KVILSL 340 (340)
T ss_pred eeeeeeHHHHHHHHHHHhcCC-Cc-eEEEeC
Confidence 56799999999999999876 47 999986
No 117
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-33 Score=263.97 Aligned_cols=319 Identities=26% Similarity=0.333 Sum_probs=255.6
Q ss_pred ceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCC
Q 017064 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (378)
Q Consensus 49 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 128 (378)
|++.+...+.+.. +.+.+.+.|.+.+++|+||+.++++|++|.....|..+..+..|..+|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 79 (337)
T cd08275 1 RAVVLTGFGGLDK-LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFK 79 (337)
T ss_pred CeEEEcCCCCccc-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCC
Confidence 3455555554433 777788878899999999999999999999988876544334577899999999999999999999
Q ss_pred CCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHH
Q 017064 129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (378)
Q Consensus 129 ~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~l 208 (378)
+||+|+++.. .|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.+|++|+|+|++|++|++++++
T Consensus 80 ~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~ 158 (337)
T cd08275 80 VGDRVMGLTR-FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL 158 (337)
T ss_pred CCCEEEEecC-CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence 9999999754 389999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEE
Q 017064 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTM 287 (378)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~ 287 (378)
|++. .++.+++. ..+++.+.++.+|++.+++..... ...++..++ . ++|+++||+|+.....++++++++|++
T Consensus 159 a~~~--~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~d~v~~~~g~~~~~~~~~~l~~~g~~ 232 (337)
T cd08275 159 CKTV--PNVTVVGT--ASASKHEALKENGVTHVIDYRTQDYVEEVKKISP-E-GVDIVLDALGGEDTRKSYDLLKPMGRL 232 (337)
T ss_pred HHHc--cCcEEEEe--CCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-C-CceEEEECCcHHHHHHHHHhhccCcEE
Confidence 9998 33333322 245577788889999988877543 355666664 3 499999999998888999999999999
Q ss_pred EEEecCCCCC---c-------------cccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ce
Q 017064 288 VTYGGMSKKP---I-------------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-ME 350 (378)
Q Consensus 288 v~~g~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~ 350 (378)
+.+|.....+ . .+.....+.+++++.++.....+. ..+ .....+.++++++.++.+++. ..
T Consensus 233 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 310 (337)
T cd08275 233 VVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKPKIDS 310 (337)
T ss_pred EEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCCceee
Confidence 9998543211 1 111234577899999887643222 122 334568889999999998865 46
Q ss_pred eeccccHHHHHHHHHccCCCCCceEeeC
Q 017064 351 LVPFNNFQTALSKALGLHGSQPKQVIKF 378 (378)
Q Consensus 351 ~~~l~~~~~a~~~~~~~~~~g~kvvv~~ 378 (378)
.|++++++++++.+.+++..+ |+++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~-kvv~~~ 337 (337)
T cd08275 311 VFPFEEVGEAMRRLQSRKNIG-KVVLTP 337 (337)
T ss_pred EEcHHHHHHHHHHHHcCCCcc-eEEEeC
Confidence 799999999999999988888 999874
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=3.5e-34 Score=264.21 Aligned_cols=304 Identities=26% Similarity=0.358 Sum_probs=249.5
Q ss_pred cceEEEcccCCCccceEEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCC--CCCCCCccCCCceeEEEEEecCCCC
Q 017064 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVT 125 (378)
Q Consensus 48 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~v~ 125 (378)
|+++++..++.... +.+.+.+.|.+++++|+|+|.++++|+.|+..+.|... .....|..+|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~ 79 (309)
T cd05289 1 MKAVRIHEYGGPEV-LELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT 79 (309)
T ss_pred CceEEEcccCCccc-eeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence 67888887776543 66777777889999999999999999999998877542 1124578999999999999999999
Q ss_pred CCCCCCEEeeCCC--CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064 126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (378)
Q Consensus 126 ~~~~Gd~V~~~~~--~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~ 203 (378)
.+++||+|+++.. ..|+|++|+.++...++++|+++++..++.+++.+.++|+++.....+.+|++|+|+|++|.+|+
T Consensus 80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~ 159 (309)
T cd05289 80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGS 159 (309)
T ss_pred CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Confidence 9999999998861 13899999999999999999999999999999999999999988777999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhccc
Q 017064 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 283 (378)
Q Consensus 204 ~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~ 283 (378)
++++++++.|++++++++ ++ +.+.++++|++.+++....+..+ ...+.+ +|+++||+|+.....+++++++
T Consensus 160 ~~~~~a~~~g~~v~~~~~----~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~-~d~v~~~~~~~~~~~~~~~l~~ 230 (309)
T cd05289 160 FAVQLAKARGARVIATAS----AA-NADFLRSLGADEVIDYTKGDFER---AAAPGG-VDAVLDTVGGETLARSLALVKP 230 (309)
T ss_pred HHHHHHHHcCCEEEEEec----ch-hHHHHHHcCCCEEEeCCCCchhh---ccCCCC-ceEEEECCchHHHHHHHHHHhc
Confidence 999999999999998873 44 67778889998888776544333 334434 9999999999988999999999
Q ss_pred CCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHH
Q 017064 284 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALS 362 (378)
Q Consensus 284 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~ 362 (378)
+|+++.+|..... . . ..+.+++++....+. +. .+.+++++++++++.+++. ++.|++++++++++
T Consensus 231 ~g~~v~~g~~~~~-~--~--~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 296 (309)
T cd05289 231 GGRLVSIAGPPPA-E--Q--AAKRRGVRAGFVFVE-------PD--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHE 296 (309)
T ss_pred CcEEEEEcCCCcc-h--h--hhhhccceEEEEEec-------cc--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHH
Confidence 9999999854321 1 1 334566666665431 11 4678889999999998764 56899999999999
Q ss_pred HHHccCCCCCceEe
Q 017064 363 KALGLHGSQPKQVI 376 (378)
Q Consensus 363 ~~~~~~~~g~kvvv 376 (378)
.+.+++..+ |+|+
T Consensus 297 ~~~~~~~~~-kvv~ 309 (309)
T cd05289 297 RLESGHARG-KVVL 309 (309)
T ss_pred HHHhCCCCC-cEeC
Confidence 999888877 8774
No 119
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=2e-33 Score=256.58 Aligned_cols=288 Identities=27% Similarity=0.316 Sum_probs=241.3
Q ss_pred CcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceE
Q 017064 76 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155 (378)
Q Consensus 76 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~ 155 (378)
+||+||+.++++|++|+....|..+ .+|.++|||++|+|+++|+++..+++||+|++... |+|++|+.++.+.++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~--g~~~~~~~~~~~~~~ 75 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP--GAFATHVRVDARLVV 75 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec--CcccceEEechhheE
Confidence 5899999999999999998887652 35789999999999999999999999999998754 899999999999999
Q ss_pred EcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh
Q 017064 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG 235 (378)
Q Consensus 156 ~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~ 235 (378)
++|+++++.+++.++++..++|+++.+...+++|++|+|+|++|++|++++++|+.+|+++++++ .++++.+.+++
T Consensus 76 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~ 151 (293)
T cd05195 76 KIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATV----GSEEKREFLRE 151 (293)
T ss_pred eCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHH
Confidence 99999999999999999999999998888999999999999889999999999999999999888 46778888888
Q ss_pred CC--CcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCCC-ccccchhhhhcCce
Q 017064 236 LG--ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLS 311 (378)
Q Consensus 236 ~g--a~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~ 311 (378)
+| ++.+++.... ..+.+++.+.+.+ +|+++|++|+..+..++++++++|+++.+|...... ..+.. ..+.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~ 229 (293)
T cd05195 152 LGGPVDHIFSSRDLSFADGILRATGGRG-VDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGM-RPFLRNVS 229 (293)
T ss_pred hCCCcceEeecCchhHHHHHHHHhCCCC-ceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccch-hhhccCCe
Confidence 88 7888877654 3456777777666 999999999998899999999999999998543321 11222 23456778
Q ss_pred EEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 312 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
+.......+.. ..+....+.+.+++++++++.+++. ...|++++++++++.+.+++..+ |+|+
T Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~ivv 293 (293)
T cd05195 230 FSSVDLDQLAR-ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIG-KVVL 293 (293)
T ss_pred EEEEeHHHHhh-hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCc-eecC
Confidence 77776654422 2344456788899999999998865 45799999999999999988887 8774
No 120
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.6e-33 Score=256.54 Aligned_cols=232 Identities=21% Similarity=0.236 Sum_probs=190.9
Q ss_pred cCCCceeEEEEEecCCCC------CCCCCCEEeeCCC---------------------------------CCccccccee
Q 017064 108 VGGYEGVGEVYSVGSAVT------RLAPGDWVIPSPP---------------------------------SSGTWQSYVV 148 (378)
Q Consensus 108 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~---------------------------------~~G~~~~~~~ 148 (378)
++|||++|+|+++|++|+ +|++||||+..+. .+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 579999999999999999 8999999975321 1389999999
Q ss_pred ccCC-ceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCc
Q 017064 149 KDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGS 226 (378)
Q Consensus 149 ~~~~-~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~ 226 (378)
++++ +++++|+++++++++.+++.+.|+|+++.. ....+|++|||+|+ |++|++++|+||++|++ |+++. .+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~----~~ 154 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAAD----PS 154 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CC
Confidence 9997 799999999999999999989999999976 55679999999997 99999999999999998 65554 47
Q ss_pred HHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEecCC-CCCccccchh
Q 017064 227 DEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMS-KKPITVSTSA 304 (378)
Q Consensus 227 ~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~ 304 (378)
++|.++++++|++++++..+. .+.+.+++.+.+ +|++||++|.+ .++.++++++++|+++.+|... ..+.++++..
T Consensus 155 ~~r~~~a~~~Ga~~~i~~~~~-~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~ 232 (280)
T TIGR03366 155 PDRRELALSFGATALAEPEVL-AERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQ 232 (280)
T ss_pred HHHHHHHHHcCCcEecCchhh-HHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHH
Confidence 889999999999999987543 345666676655 99999999975 4689999999999999999653 2345677788
Q ss_pred hhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcC--Cccc---cceeeccccH
Q 017064 305 FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG--KLKY---DMELVPFNNF 357 (378)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~~~~---~~~~~~l~~~ 357 (378)
++.+++++.|+.... .+.++++++++.++ ++++ .+++|||+|+
T Consensus 233 ~~~~~~~i~g~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 233 VVRRWLTIRGVHNYE----------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HHhCCcEEEecCCCC----------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 889999999975421 24578888999874 4443 2567999874
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-32 Score=255.43 Aligned_cols=295 Identities=29% Similarity=0.342 Sum_probs=231.8
Q ss_pred EEeeeCCCCCCCCcEEEEEEeeccChhhhhhhcccCCC--CCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCC--C
Q 017064 64 KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--S 139 (378)
Q Consensus 64 ~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--~ 139 (378)
++.+.+.|.+.++||+|++.++++|++|.....|..+. ....|..+|||++|+|+++|+++.++++||+|++... .
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~ 94 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKG 94 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCC
Confidence 77888889999999999999999999999988775521 1124678999999999999999999999999998752 2
Q ss_pred CcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEE
Q 017064 140 SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219 (378)
Q Consensus 140 ~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~ 219 (378)
.|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+...+.+|++|+|+|++|++|++++++|+.+|++++++
T Consensus 95 ~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~ 174 (319)
T cd08267 95 GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGV 174 (319)
T ss_pred CceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEE
Confidence 48999999999999999999999999999999999999999887779999999999999999999999999999999888
Q ss_pred ecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc--HHHHHHhcccCCEEEEEecCCCCC
Q 017064 220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS--ASKVLKFLSQGGTMVTYGGMSKKP 297 (378)
Q Consensus 220 ~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~ 297 (378)
+ .+ ++.+.++++|++++++....... ...+.+.+ +|++++|+|+.. ....+..++++|+++.+|......
T Consensus 175 ~----~~-~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~-~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~ 246 (319)
T cd08267 175 C----ST-RNAELVRSLGADEVIDYTTEDFV--ALTAGGEK-YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL 246 (319)
T ss_pred e----CH-HHHHHHHHcCCCEeecCCCCCcc--hhccCCCC-CcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc
Confidence 7 23 77788899999988876654322 34445544 999999999533 234444599999999998543322
Q ss_pred cccc---chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCc
Q 017064 298 ITVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPK 373 (378)
Q Consensus 298 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~k 373 (378)
.... ..........+..... . +. .+.+.+++++++++.+++. ++.|++++++++++.+.+++..+ |
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~----~---~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~-~ 316 (319)
T cd08267 247 LLVLLLLPLTLGGGGRRLKFFLA----K---PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARG-K 316 (319)
T ss_pred cccccccchhhccccceEEEEEe----c---CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCC-c
Confidence 1111 0111111222222211 1 11 4678889999999998864 56899999999999999888877 8
Q ss_pred eEe
Q 017064 374 QVI 376 (378)
Q Consensus 374 vvv 376 (378)
+++
T Consensus 317 vvv 319 (319)
T cd08267 317 VVI 319 (319)
T ss_pred EeC
Confidence 774
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=1.3e-32 Score=250.90 Aligned_cols=282 Identities=28% Similarity=0.361 Sum_probs=235.4
Q ss_pred EEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCC
Q 017064 80 VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159 (378)
Q Consensus 80 V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~ 159 (378)
|||.++++|++|+....|.++ .|.++|||++|+|+++|++++.+++||+|++... |+|++|+.++.+.++++|+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--g~~~~~~~~~~~~~~~~p~ 75 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP--GSFATYVRTDARLVVPIPD 75 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--CceeeEEEccHHHeEECCC
Confidence 899999999999999887653 2578999999999999999999999999998754 8999999999999999999
Q ss_pred CCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-
Q 017064 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA- 238 (378)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga- 238 (378)
++++.+++.+++.+.++|+++.....+.+|++|+|+|++|.+|++++++|++.|++|++++ .++++.+.++++|+
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~ 151 (288)
T smart00829 76 GLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATA----GSPEKRDFLRELGIP 151 (288)
T ss_pred CCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCC
Confidence 9999999999999999999997778999999999999889999999999999999999888 47788888899998
Q ss_pred -cEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCCCC-CccccchhhhhcCceEEEE
Q 017064 239 -DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGF 315 (378)
Q Consensus 239 -~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 315 (378)
+.+++..... .+.+.+.+++++ +|+++|++|+.....++++++++|+++.+|..... ...++... +.+++++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (288)
T smart00829 152 DDHIFSSRDLSFADEILRATGGRG-VDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAV 229 (288)
T ss_pred hhheeeCCCccHHHHHHHHhCCCC-cEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEE
Confidence 7888766543 456777777665 99999999987778899999999999999854321 12233333 4677888877
Q ss_pred echhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 316 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
....+. ..+....+.+.+++++++++.+++. ++.|++++++++++.+.+++..+ |+++
T Consensus 230 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ivv 288 (288)
T smart00829 230 DLDALE--EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIG-KVVL 288 (288)
T ss_pred EHHHhh--cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcc-eEeC
Confidence 665432 1333455677888999999988764 56799999999999999988777 8764
No 123
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=3.2e-31 Score=228.47 Aligned_cols=296 Identities=23% Similarity=0.328 Sum_probs=238.7
Q ss_pred EeeeCCC-CCCCCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCC----CceeEEEEEecCCCCCCCCCCEEeeCCCC
Q 017064 65 MIELPPV-EVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGG----YEGVGEVYSVGSAVTRLAPGDWVIPSPPS 139 (378)
Q Consensus 65 ~~~~~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 139 (378)
..+.+++ ++++++|+||..|.+..|.-...+....+...-.|+.+| ..++|+|++. +..++++||.|.+..
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~-- 101 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV-- 101 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec--
Confidence 3344543 679999999999999998887766644443222344444 2678999994 567899999999874
Q ss_pred CcccccceeccCCc--eEEcCC--CCCH-hhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC
Q 017064 140 SGTWQSYVVKDQSV--WHKVSK--DSPM-EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214 (378)
Q Consensus 140 ~G~~~~~~~~~~~~--~~~iP~--~~~~-~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~ 214 (378)
+|.+|.+++++. .+++|. ++++ ....++.++.+|||.++.+.+..+.|++|+|.||+|++|+++.|+||.+|+
T Consensus 102 --gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc 179 (343)
T KOG1196|consen 102 --GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC 179 (343)
T ss_pred --cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC
Confidence 699999998754 445444 3332 233456778999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcc-cHH-HHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEe
Q 017064 215 HSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL-EVK-NVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 215 ~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~-~~~-~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g 291 (378)
+|++++ ++.||.++++ ++|.|..+|+.++ +.+ .+++..+. ++|+.||++|+...+..+..|+..||++.||
T Consensus 180 ~VVGsa----GS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~--GIDiYfeNVGG~~lDavl~nM~~~gri~~CG 253 (343)
T KOG1196|consen 180 YVVGSA----GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPE--GIDIYFENVGGKMLDAVLLNMNLHGRIAVCG 253 (343)
T ss_pred EEEEec----CChhhhhhhHhccCCccceeccCccCHHHHHHHhCCC--cceEEEeccCcHHHHHHHHhhhhccceEeee
Confidence 999999 7999999997 5899999999987 654 45555554 4999999999999999999999999999999
Q ss_pred cCCCCCcccc-----chhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCccccceee-ccccHHHHHHHHH
Q 017064 292 GMSKKPITVS-----TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELV-PFNNFQTALSKAL 365 (378)
Q Consensus 292 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~l~~~~~a~~~~~ 365 (378)
..+.++.+.+ ...++.|++++.|+....+ .+.+.+.++.+..++++|+|+...+++ .|++.++|+.-|.
T Consensus 254 ~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~-----~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf 328 (343)
T KOG1196|consen 254 MISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY-----LDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLF 328 (343)
T ss_pred eehhccccCCccccchhhheeeeEEeeeEEeech-----hhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHh
Confidence 8875543322 2456779999999765543 456788999999999999999886654 6999999999999
Q ss_pred ccCCCCCceEeeC
Q 017064 366 GLHGSQPKQVIKF 378 (378)
Q Consensus 366 ~~~~~g~kvvv~~ 378 (378)
++++.| |.++.+
T Consensus 329 ~GkNvG-Kqiv~v 340 (343)
T KOG1196|consen 329 HGKNVG-KQLVKV 340 (343)
T ss_pred ccCccc-ceEEEe
Confidence 999999 999864
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=3.4e-31 Score=239.68 Aligned_cols=236 Identities=31% Similarity=0.412 Sum_probs=200.4
Q ss_pred cEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCC------------------
Q 017064 77 DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------ 138 (378)
Q Consensus 77 eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~------------------ 138 (378)
||+|+|.++++|+.|+..+.|..+.....|.++|||++|+|+++|++++.|++||+|++...
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 68999999999999999998876523346789999999999999999999999999998762
Q ss_pred ----CCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC
Q 017064 139 ----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214 (378)
Q Consensus 139 ----~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~ 214 (378)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++|||+|+++ +|+++++++++.|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 1589999999999999999999999999999999999999999877779999999999966 99999999999999
Q ss_pred cEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc-HHHHHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEec
Q 017064 215 HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 215 ~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~ 292 (378)
+|++++ .++++.+.++++|++.+++..... .+.+. ...+.+ +|++|++++. .....++++++++|+++.++.
T Consensus 160 ~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~ 233 (271)
T cd05188 160 RVIVTD----RSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGG-ADVVIDAVGGPETLAQALRLLRPGGRIVVVGG 233 (271)
T ss_pred eEEEEc----CCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCC-CCEEEECCCCHHHHHHHHHhcccCCEEEEEcc
Confidence 999888 467888888999999988876654 33444 444444 9999999998 777899999999999999986
Q ss_pred CCCCCccccchhhhhcCceEEEEechh
Q 017064 293 MSKKPITVSTSAFIFKDLSLKGFWLQK 319 (378)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (378)
.............+.+++++.++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 234 TSGGPPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred CCCCCCcccHHHHHhcceEEEEeecCC
Confidence 554332223456678999999987653
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=8.8e-31 Score=256.98 Aligned_cols=298 Identities=19% Similarity=0.179 Sum_probs=249.4
Q ss_pred eEEeeeCCC---CCCCCcEEEEEEeeccChhhhhhhcccCCCCC------CCCccCCCceeEEEEEecCCCCCCCCCCEE
Q 017064 63 IKMIELPPV---EVKENDVCVKMLAAPINPSDINRIEGVYPVRP------KVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133 (378)
Q Consensus 63 ~~~~~~~~p---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 133 (378)
+++.+-|.. +..++.=+.-|.|+.||..|++...|+.+-.. .-...+|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 566666543 45667778899999999999999998865331 1236788899887 5679999
Q ss_pred eeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC
Q 017064 134 IPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG 213 (378)
Q Consensus 134 ~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g 213 (378)
+++.+. -++++.+.++.++++.+|.+..+++|++.|+.+.||||+|..++..++|+++|||+++|++|++|+.+|.+.|
T Consensus 1499 M~mvpA-ksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G 1577 (2376)
T KOG1202|consen 1499 MGMVPA-KSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHG 1577 (2376)
T ss_pred EEeeeh-hhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcC
Confidence 998763 6789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHH-HHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEE
Q 017064 214 IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN-VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMV 288 (378)
Q Consensus 214 ~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~-i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v 288 (378)
++|+.++ ++.||+++++ ++-..++-|+++.+.+. +...|.|+| +|+|+++...+.++.+++||+-+|||.
T Consensus 1578 ~~VFTTV----GSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeEkLQASiRCLa~~GRFL 1652 (2376)
T KOG1202|consen 1578 CTVFTTV----GSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEEKLQASIRCLALHGRFL 1652 (2376)
T ss_pred CEEEEec----CcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHHHHHHHHHHHHhcCeee
Confidence 9999999 7899999886 36677788888887765 777888888 999999999999999999999999999
Q ss_pred EEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHcc
Q 017064 289 TYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGL 367 (378)
Q Consensus 289 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~ 367 (378)
.+|...-...+-.-+..+.||.+++|....++.. ...+++++.+..+.+=++.|..+|. +++|+-.++++||+.|.++
T Consensus 1653 EIGKfDLSqNspLGMavfLkNvsfHGiLLDsvme-ge~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasG 1731 (2376)
T KOG1202|consen 1653 EIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVME-GEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASG 1731 (2376)
T ss_pred eecceecccCCcchhhhhhcccceeeeehhhhhc-CcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhcc
Confidence 9996544333333367788999999999877644 2344455555555566666777775 6799999999999999999
Q ss_pred CCCCCceEeeC
Q 017064 368 HGSQPKQVIKF 378 (378)
Q Consensus 368 ~~~g~kvvv~~ 378 (378)
++.| |||+++
T Consensus 1732 KHIG-KVvikv 1741 (2376)
T KOG1202|consen 1732 KHIG-KVVIKV 1741 (2376)
T ss_pred Cccc-eEEEEE
Confidence 9999 999974
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=8.7e-29 Score=225.22 Aligned_cols=258 Identities=24% Similarity=0.278 Sum_probs=201.0
Q ss_pred ccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH
Q 017064 97 GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 176 (378)
Q Consensus 97 g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta 176 (378)
|.+|. ++|.++|||++|+|+++|++++++++||+|++. +.|++|++++.+.++++|+++++.+++.+ .++++|
T Consensus 14 ~~~~~--~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta 86 (277)
T cd08255 14 GTEKL--PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATA 86 (277)
T ss_pred cCccC--cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHH
Confidence 44444 478999999999999999999999999999986 46999999999999999999999999988 789999
Q ss_pred HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCC-CcEEEccCcccHHHHHH
Q 017064 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKG 254 (378)
Q Consensus 177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~i~~ 254 (378)
|+++. .+++++|++++|+|+ |.+|++++++|+++|++ ++++. .++++.+.++++| ++.+++... .
T Consensus 87 ~~~~~-~~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~-------~ 153 (277)
T cd08255 87 LNGVR-DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVD----PDAARRELAEALGPADPVAADTA-------D 153 (277)
T ss_pred HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEC----CCHHHHHHHHHcCCCccccccch-------h
Confidence 99986 589999999999975 99999999999999999 87776 4778888889999 565554332 1
Q ss_pred HhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccH--HHHHH
Q 017064 255 LLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKA--TECRN 331 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 331 (378)
.+.+.+ +|++||+++. .....++++++++|+++.+|..... .......+..+.+++.+.....+...... ....+
T Consensus 154 ~~~~~~-~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (277)
T cd08255 154 EIGGRG-ADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEAR 231 (277)
T ss_pred hhcCCC-CCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccc
Confidence 223434 9999999885 5568899999999999999865433 11122334446668777765433111110 12235
Q ss_pred HHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHHccCCCCCceEe
Q 017064 332 MIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 332 ~~~~~~~~l~~g~~~~~-~~~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
.+++++++++++.+++. .+.|+++++++|++.+.+++..-.|+++
T Consensus 232 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 232 NLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 78889999999998865 5679999999999999877322237764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.75 E-value=2e-18 Score=133.91 Aligned_cols=83 Identities=41% Similarity=0.516 Sum_probs=71.2
Q ss_pred CCcEEEEEEeeccChhhhhhhcccCCCCCCCCccCCCceeEEEEEecCCCCCCCCCCEEeeCCCC---------------
Q 017064 75 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS--------------- 139 (378)
Q Consensus 75 ~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--------------- 139 (378)
|+||+|||.++|||++|++.+.|......++|.++|||++|+|+++|+++++|++||+|++.+..
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999999644444789999999999999999999999999999984421
Q ss_pred -----------CcccccceeccCCceEEc
Q 017064 140 -----------SGTWQSYVVKDQSVWHKV 157 (378)
Q Consensus 140 -----------~G~~~~~~~~~~~~~~~i 157 (378)
+|+|+||+++++++++|+
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 799999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=2.4e-17 Score=132.26 Aligned_cols=115 Identities=30% Similarity=0.484 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc-cHHHHHHHhcCCCCCcEEEeCCC-CccHHHH
Q 017064 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVG-GNSASKV 277 (378)
Q Consensus 200 ~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~-~~~~i~~~~~~~g~~Dvvid~~g-~~~~~~~ 277 (378)
++|++++|+||+.|++|++++ .+++|++.++++|+++++++++. ..+.+++++++.+ +|+||||+| ...++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~----~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATD----RSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRG-VDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSS-EEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHhhccccccccccccccccccccccccc-ceEEEEecCcHHHHHHH
Confidence 689999999999999999998 58999999999999999999887 4578999998866 999999999 5677999
Q ss_pred HHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechh
Q 017064 278 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 319 (378)
Q Consensus 278 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (378)
+++++++|+++.+|.....+.+++...++.+++++.|+..++
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 999999999999997765677888899999999999998763
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.46 E-value=5.9e-14 Score=112.03 Aligned_cols=123 Identities=27% Similarity=0.334 Sum_probs=79.5
Q ss_pred CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC--CccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceE
Q 017064 236 LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG--GNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSL 312 (378)
Q Consensus 236 ~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 312 (378)
|||++++|++..+. .... ++|+|||++| .+.+ ..++++| ++|+++.++. .........+...+
T Consensus 1 LGAd~vidy~~~~~------~~~~-~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRDTDF------AGPG-GVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTCSHH------HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred CCcCEEecCCCccc------cCCC-CceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence 69999999986554 3332 4999999999 4433 5666778 9999999873 11112222233333
Q ss_pred EEEechhhhccccHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHHHHccCCCCCceEe
Q 017064 313 KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSKALGLHGSQPKQVI 376 (378)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~l~~~~~a~~~~~~~~~~g~kvvv 376 (378)
....+... ...+...+.++++.+++.+|++++.+. +|||+++++|++.+++++..| |+||
T Consensus 67 ~~~~~~~~---~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~G-KvVl 127 (127)
T PF13602_consen 67 RYSFLFSV---DPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARG-KVVL 127 (127)
T ss_dssp EEECCC-H-----HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SS-EEEE
T ss_pred EEEEEEec---CCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCC-eEeC
Confidence 33332211 000235567999999999999999975 799999999999999999999 9997
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.38 E-value=1.7e-11 Score=115.46 Aligned_cols=174 Identities=13% Similarity=0.091 Sum_probs=129.6
Q ss_pred HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064 175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 253 (378)
Q Consensus 175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~ 253 (378)
++|.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|+++. .++.|...++.+|++.+. . ++
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d----~d~~R~~~A~~~G~~~~~-~-----~e-- 253 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTE----VDPICALQAAMEGYEVMT-M-----EE-- 253 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE----CChhhHHHHHhcCCEEcc-H-----HH--
Confidence 34566655444 468999999999 9999999999999999988765 367788888999985442 1 11
Q ss_pred HHhcCCCCCcEEEeCCCCcc-HHHH-HHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHHH
Q 017064 254 GLLANLPEPALGFNCVGGNS-ASKV-LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 331 (378)
Q Consensus 254 ~~~~~~g~~Dvvid~~g~~~-~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (378)
... ++|+||+|+|... +... +++++++|.++.+|.. +.+++...+..+++++.++..+.. ..
T Consensus 254 -~v~---~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~---------~~ 317 (413)
T cd00401 254 -AVK---EGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVD---------RY 317 (413)
T ss_pred -HHc---CCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcc---------eE
Confidence 122 3899999999865 4554 9999999999999832 456788888889999988764310 01
Q ss_pred HHH--HHHHHHHcCCc-ccc---cee-----eccc-cHHHHHHHHHccCCCCCceEee
Q 017064 332 MID--YLLCLAREGKL-KYD---MEL-----VPFN-NFQTALSKALGLHGSQPKQVIK 377 (378)
Q Consensus 332 ~~~--~~~~~l~~g~~-~~~---~~~-----~~l~-~~~~a~~~~~~~~~~g~kvvv~ 377 (378)
.++ +.+.++.+|++ +.. .+. |+|+ |+.++++.+.++.....|+++.
T Consensus 318 ~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 318 ELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred EcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 233 57899999998 432 345 8899 9999999999876543377764
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.35 E-value=3.2e-11 Score=116.36 Aligned_cols=250 Identities=14% Similarity=0.116 Sum_probs=147.2
Q ss_pred CCcEEEEEEeec-cChhhhhhhc-ccCCCCCCCCccCCCceeEEEEEecCC----CCCCCCCCEEeeCCCCCcccccc--
Q 017064 75 ENDVCVKMLAAP-INPSDINRIE-GVYPVRPKVPAVGGYEGVGEVYSVGSA----VTRLAPGDWVIPSPPSSGTWQSY-- 146 (378)
Q Consensus 75 ~~eVlV~v~~~~-i~~~D~~~~~-g~~~~~~~~p~~~G~e~~G~V~~vG~~----v~~~~~Gd~V~~~~~~~G~~~~~-- 146 (378)
.-+|+|+--|.. .+.+|-.+.. |..-.. . .-+.. +-+|+.+-.- +..++.|..++++.+. ....+.
T Consensus 30 G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~-~-~~v~~---~diilkV~~P~~~e~~~l~~g~~li~~l~p-~~~~~l~~ 103 (509)
T PRK09424 30 GFEVVVESGAGQLASFDDAAYREAGAEIVD-G-AAVWQ---SDIILKVNAPSDDEIALLREGATLVSFIWP-AQNPELLE 103 (509)
T ss_pred CCEEEEeCCCCcCCCCCHHHHHHCCCEEec-C-ccccc---CCEEEEeCCCCHHHHHhcCCCCEEEEEeCc-ccCHHHHH
Confidence 456777766543 3667766554 321110 0 11222 4556655433 3569999998887542 111111
Q ss_pred -------eeccCCceEEcCCCCCHhhhhhccccHHHHHHHH----HHHh----------ccCCCCEEEEeCCCchHHHHH
Q 017064 147 -------VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML----EDFT----------TLNSGDSIVQNGATSIVGQCI 205 (378)
Q Consensus 147 -------~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l----~~~~----------~~~~g~~VlV~g~~g~~G~~a 205 (378)
..+.-+.+.++.+.-++.. ....+-...|.++ .... +..++++|+|.|+ |.+|++|
T Consensus 104 ~l~~~~it~ia~e~vpr~sraq~~d~--lssma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~A 180 (509)
T PRK09424 104 KLAARGVTVLAMDAVPRISRAQSLDA--LSSMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAA 180 (509)
T ss_pred HHHHcCCEEEEeecccccccCCCccc--ccchhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHH
Confidence 1222233433333221111 1111122223332 2221 2467999999999 9999999
Q ss_pred HHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc--------------HHHHHHH-hcCCCCCcEEEeCC
Q 017064 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE--------------VKNVKGL-LANLPEPALGFNCV 269 (378)
Q Consensus 206 v~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~--------------~~~i~~~-~~~~g~~Dvvid~~ 269 (378)
++.|+.+|++|+++. .++++++.++++|++.+ ++..+.. .+...+. ....+++|+||+|+
T Consensus 181 i~~Ak~lGA~V~a~D----~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIeta 256 (509)
T PRK09424 181 IGAAGSLGAIVRAFD----TRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTA 256 (509)
T ss_pred HHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECC
Confidence 999999999877666 48899999999999965 5543311 1122222 22223499999999
Q ss_pred CCc------c-HHHHHHhcccCCEEEEEecCCCCC--ccccchhhhh-cCceEEEEechhhhccccHHHHHHHHHHHHHH
Q 017064 270 GGN------S-ASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIF-KDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 339 (378)
Q Consensus 270 g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (378)
|.+ . .++.++.+++||+++.++...+.+ .+.+...++. +++++.|++.. + .+...++.++
T Consensus 257 g~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~-------P---~~~p~~As~l 326 (509)
T PRK09424 257 LIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL-------P---SRLPTQSSQL 326 (509)
T ss_pred CCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC-------c---hhHHHHHHHH
Confidence 963 2 389999999999999999654443 3444455665 89999997531 1 1223346666
Q ss_pred HHcCCccc
Q 017064 340 AREGKLKY 347 (378)
Q Consensus 340 l~~g~~~~ 347 (378)
+.++.++.
T Consensus 327 la~~~i~l 334 (509)
T PRK09424 327 YGTNLVNL 334 (509)
T ss_pred HHhCCccH
Confidence 77666654
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.53 E-value=3.9e-06 Score=81.24 Aligned_cols=126 Identities=14% Similarity=0.150 Sum_probs=88.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCc--------------ccHHH
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQ--------------LEVKN 251 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~--------------~~~~~ 251 (378)
.++++|+|.|+ |.+|+++++.|+.+|++|++.. .+.++++.++++|++.+. +..+ +..+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d----~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFD----TRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHH
Confidence 35689999999 9999999999999999987776 477889999999998743 3211 11122
Q ss_pred HHHHhc-CCCCCcEEEeCC---CC--c--cHHHHHHhcccCCEEEEEecCCCCCccccc-hhhhh--cCceEEEEec
Q 017064 252 VKGLLA-NLPEPALGFNCV---GG--N--SASKVLKFLSQGGTMVTYGGMSKKPITVST-SAFIF--KDLSLKGFWL 317 (378)
Q Consensus 252 i~~~~~-~~g~~Dvvid~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~--~~~~~~~~~~ 317 (378)
..+++. ...++|++|+|+ |. + ..+..++.+++|+.+|.++...+.+.+... ...+. .++.+.+...
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 223232 122499999999 64 3 237789999999999999866665544331 22222 3488777653
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.49 E-value=8e-07 Score=80.55 Aligned_cols=167 Identities=13% Similarity=0.057 Sum_probs=94.7
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhc
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA 257 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~ 257 (378)
+.+++|++||..|+ |. |..+.++++..|. +|+++. .+++..+.+++ .|.+.+- ... ..+..+.-
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD----~s~~~l~~A~~~~~~~g~~~v~-~~~---~d~~~l~~ 142 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVD----MTPEMLAKARANARKAGYTNVE-FRL---GEIEALPV 142 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEEC----CCHHHHHHHHHHHHHcCCCCEE-EEE---cchhhCCC
Confidence 67889999999998 66 8888888888776 466665 36777776654 4433221 111 12222221
Q ss_pred CCCCCcEEEeCCC-----C--ccHHHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEEechhhhccccHHHHH
Q 017064 258 NLPEPALGFNCVG-----G--NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 330 (378)
Q Consensus 258 ~~g~~Dvvid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (378)
..+.+|+|+.+.. . ..+..+.+.|++||+++..+.....+ ++ ..+.+...+.+......
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~---------- 208 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGA---------- 208 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCC----------
Confidence 1124999996542 1 34588999999999999877443221 11 11122222221111100
Q ss_pred HHHHHHHHHHHcCCccc-c---ceeeccccHHHHHHHH--HccCCCCCceE
Q 017064 331 NMIDYLLCLAREGKLKY-D---MELVPFNNFQTALSKA--LGLHGSQPKQV 375 (378)
Q Consensus 331 ~~~~~~~~~l~~g~~~~-~---~~~~~l~~~~~a~~~~--~~~~~~g~kvv 375 (378)
...+++.+++++..+.. . ...++++++.++++.+ ..++..+ +.+
T Consensus 209 ~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~ 258 (272)
T PRK11873 209 LQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLD-GYI 258 (272)
T ss_pred CCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccC-ceE
Confidence 01233445555533332 2 2358899999999998 5555444 444
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.24 E-value=1.8e-05 Score=75.23 Aligned_cols=104 Identities=15% Similarity=0.131 Sum_probs=75.5
Q ss_pred HHHHHHHHHHhccC-CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064 174 LTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 252 (378)
Q Consensus 174 ~ta~~~l~~~~~~~-~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i 252 (378)
..+|.++.+..++. .|++|+|.|. |.+|...++.++.+|++|+++.+ ++.+...+...|++. .+ +
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~----dp~ra~~A~~~G~~v-~~--------l 261 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEV----DPICALQAAMDGFRV-MT--------M 261 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC----CchhhHHHHhcCCEe-cC--------H
Confidence 34667776643554 8999999999 99999999999999999887763 445544455557642 21 1
Q ss_pred HHHhcCCCCCcEEEeCCCCcc-HH-HHHHhcccCCEEEEEecCC
Q 017064 253 KGLLANLPEPALGFNCVGGNS-AS-KVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 294 (378)
.+... ++|+||+++|... +. ..+..+++|+.++..|...
T Consensus 262 ~eal~---~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 262 EEAAE---LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred HHHHh---CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 22222 3999999999854 43 6789999999999998543
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.23 E-value=0.00013 Score=66.81 Aligned_cols=110 Identities=9% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.+++|+|.|. |.+|+.+++.++.+|++|+++.+ +.++.+.++++|+..+. .+.+.+... ++|+||+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r----~~~~~~~~~~~G~~~~~------~~~l~~~l~---~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGAR----KSAHLARITEMGLSPFH------LSELAEEVG---KIDIIFN 216 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHcCCeeec------HHHHHHHhC---CCCEEEE
Confidence 5899999999 99999999999999999888874 56667777888876431 123334443 3999999
Q ss_pred CCCCccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEE
Q 017064 268 CVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 314 (378)
Q Consensus 268 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 314 (378)
|++...+ ...++.+++++.++.++...+. ..+ ...-.++++..+
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALL 261 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEE
Confidence 9876544 5677899999999999865543 222 233345566554
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.23 E-value=2.4e-05 Score=74.60 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=75.2
Q ss_pred HHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064 176 ALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (378)
Q Consensus 176 a~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~ 254 (378)
.+.++.+..++ -.|++|+|.|. |.+|+..++.++.+|++|+++.+ ++.+...+...|+..+ + .++
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~----dp~r~~eA~~~G~~vv-~-----leE--- 305 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEI----DPICALQALMEGYQVL-T-----LED--- 305 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CchhhHHHHhcCCeec-c-----HHH---
Confidence 46666655454 67999999999 99999999999999999888762 4555555666676532 1 122
Q ss_pred HhcCCCCCcEEEeCCCCcc-H-HHHHHhcccCCEEEEEec
Q 017064 255 LLANLPEPALGFNCVGGNS-A-SKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~~~-~-~~~~~~l~~~G~~v~~g~ 292 (378)
... ..|++|+++|... + ...++.|++++.++.+|.
T Consensus 306 al~---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 306 VVS---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred HHh---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence 222 3899999999864 3 789999999999999984
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.09 E-value=4.7e-05 Score=71.98 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=74.3
Q ss_pred HHHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHH
Q 017064 175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 253 (378)
Q Consensus 175 ta~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~ 253 (378)
.++.++.+..+ ...|++|+|.|. |.+|+..++.++.+|++|+++.. ++.+...+...|+. +.+. ++
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~----dp~r~~~A~~~G~~-v~~l-----ee-- 246 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEV----DPIRALEAAMDGFR-VMTM-----EE-- 246 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeC----ChhhHHHHHhcCCE-eCCH-----HH--
Confidence 35556655434 468999999999 99999999999999999888753 44555555666763 2211 11
Q ss_pred HHhcCCCCCcEEEeCCCCccH-H-HHHHhcccCCEEEEEecC
Q 017064 254 GLLANLPEPALGFNCVGGNSA-S-KVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 254 ~~~~~~g~~Dvvid~~g~~~~-~-~~~~~l~~~G~~v~~g~~ 293 (378)
... +.|++|+++|.... . ..+..+++++.++.+|..
T Consensus 247 -al~---~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 247 -AAK---IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred -HHh---cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 222 38999999998654 3 588999999999999843
No 138
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.96 E-value=0.00043 Score=65.39 Aligned_cols=148 Identities=13% Similarity=0.123 Sum_probs=90.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
+.+|+|.|+ |.+|+.+++.++.+|++|+++.+ +.++.+.+. .+|........ ..+.+.+... ++|++|+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~----~~~~~~~l~~~~g~~v~~~~~--~~~~l~~~l~---~aDvVI~ 236 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDI----NIDRLRQLDAEFGGRIHTRYS--NAYEIEDAVK---RADLLIG 236 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHhcCceeEeccC--CHHHHHHHHc---cCCEEEE
Confidence 456999999 99999999999999998777663 556665554 45553222221 1233444444 3999999
Q ss_pred CCC---C--cc--HHHHHHhcccCCEEEEEecCCCCCcccc------chhhhhcCceEEEE-echhhhccccHHHH-HHH
Q 017064 268 CVG---G--NS--ASKVLKFLSQGGTMVTYGGMSKKPITVS------TSAFIFKDLSLKGF-WLQKWLSSEKATEC-RNM 332 (378)
Q Consensus 268 ~~g---~--~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~ 332 (378)
|++ . +. ....++.+++++.++.++...+...... ...+...++.+.+. ++.+.+.......+ +..
T Consensus 237 a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l 316 (370)
T TIGR00518 237 AVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNAT 316 (370)
T ss_pred ccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHH
Confidence 983 2 22 3778888999999999986555443321 11233356777766 33333222222222 445
Q ss_pred HHHHHHHHHcCCcc
Q 017064 333 IDYLLCLAREGKLK 346 (378)
Q Consensus 333 ~~~~~~~l~~g~~~ 346 (378)
+..+..+..+|.++
T Consensus 317 ~~~l~~~~~~g~~~ 330 (370)
T TIGR00518 317 MPYVLELANHGWRA 330 (370)
T ss_pred HHHHHHHHhccccc
Confidence 55566777667554
No 139
>PRK08324 short chain dehydrogenase; Validated
Probab=97.93 E-value=5.9e-05 Score=77.32 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=86.1
Q ss_pred cccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (378)
Q Consensus 141 G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~ 220 (378)
-++++|..+++..++.+ +.++.+++...... .....+|+++||+|++|++|...++.+...|++|+++.
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 45678888888878777 66777776522110 12234689999999999999999999999999999888
Q ss_pred cCCCCcHHHHHHH-HhCCC---cEEE--ccCcc-cHHH-HHHHhcCCCCCcEEEeCCCCcc-------------------
Q 017064 221 RDRAGSDEAKEKL-KGLGA---DEVF--TESQL-EVKN-VKGLLANLPEPALGFNCVGGNS------------------- 273 (378)
Q Consensus 221 ~~~~~~~~~~~~~-~~~ga---~~vi--~~~~~-~~~~-i~~~~~~~g~~Dvvid~~g~~~------------------- 273 (378)
+ +.++.+.+ ..++. ...+ |..+. .+.. +.+.....|++|++|+++|...
T Consensus 454 r----~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N 529 (681)
T PRK08324 454 L----DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVN 529 (681)
T ss_pred C----CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 5 34443332 33433 1122 22221 1222 2222222335999999998310
Q ss_pred -------HHHHHHhccc---CCEEEEEecCC
Q 017064 274 -------ASKVLKFLSQ---GGTMVTYGGMS 294 (378)
Q Consensus 274 -------~~~~~~~l~~---~G~~v~~g~~~ 294 (378)
++.++..+++ +|++++++...
T Consensus 530 ~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 530 ATGHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 1334555555 68999998543
No 140
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.93 E-value=0.00012 Score=64.60 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=65.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---hCCCcEEEccCcccHHHH----HHHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---GLGADEVFTESQLEVKNV----KGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~~ga~~vi~~~~~~~~~i----~~~~~~~ 259 (378)
.+++|+|+|++|++|..+++.+...|++|+++++ ++++.+.+ + ..+..+.+..+-.+.+.+ .+.....
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR----NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999986 34444333 2 223323333322222221 1111112
Q ss_pred CCCcEEEeCCCCcc------------------------HHHHHHhcccCCEEEEEecCC
Q 017064 260 PEPALGFNCVGGNS------------------------ASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 260 g~~Dvvid~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~ 294 (378)
+++|.++.++|... ++..+.+++++|+++.++...
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 34899999998421 234456667789999988543
No 141
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.92 E-value=0.00021 Score=63.88 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=87.0
Q ss_pred CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHH
Q 017064 126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205 (378)
Q Consensus 126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~a 205 (378)
.+++||+++..+. |.+|.. +...++++++++++-.+..-. ...++..+.. .+.++++||-.|+ |. |..+
T Consensus 66 p~~~g~~~~i~p~----~~~~~~-~~~~~i~i~p~~afgtg~h~t--t~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~ 134 (250)
T PRK00517 66 PIRIGDRLWIVPS----WEDPPD-PDEINIELDPGMAFGTGTHPT--TRLCLEALEK--LVLPGKTVLDVGC-GS-GILA 134 (250)
T ss_pred CEEEcCCEEEECC----CcCCCC-CCeEEEEECCCCccCCCCCHH--HHHHHHHHHh--hcCCCCEEEEeCC-cH-HHHH
Confidence 3568988877653 666654 778899999999877654211 1112333332 2568899999998 54 8887
Q ss_pred HHHHHHcCCc-EEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc----HHH
Q 017064 206 IQIARHRGIH-SINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----ASK 276 (378)
Q Consensus 206 v~la~~~g~~-vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~----~~~ 276 (378)
+.+++ .|+. ++++. .++...+.+++ .+....+.... +. ..||+|+.+..... +..
T Consensus 135 i~~~~-~g~~~v~giD----is~~~l~~A~~n~~~~~~~~~~~~~~----------~~-~~fD~Vvani~~~~~~~l~~~ 198 (250)
T PRK00517 135 IAAAK-LGAKKVLAVD----IDPQAVEAARENAELNGVELNVYLPQ----------GD-LKADVIVANILANPLLELAPD 198 (250)
T ss_pred HHHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCceEEEcc----------CC-CCcCEEEEcCcHHHHHHHHHH
Confidence 76555 5765 66665 35666555543 33311111000 11 13999997766543 367
Q ss_pred HHHhcccCCEEEEEe
Q 017064 277 VLKFLSQGGTMVTYG 291 (378)
Q Consensus 277 ~~~~l~~~G~~v~~g 291 (378)
+.+.|++||.+++.+
T Consensus 199 ~~~~LkpgG~lilsg 213 (250)
T PRK00517 199 LARLLKPGGRLILSG 213 (250)
T ss_pred HHHhcCCCcEEEEEE
Confidence 889999999999876
No 142
>PRK12742 oxidoreductase; Provisional
Probab=97.92 E-value=0.00021 Score=63.09 Aligned_cols=103 Identities=16% Similarity=0.214 Sum_probs=66.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
.++++||+|++|++|...++.+...|++|+.+.+. ++++.+ ...+++...+ ..+-.+.+.+.+.....+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG---SKDAAERLAQETGATAV-QTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHhCCCcEEE
Confidence 46899999999999999999999999998877642 333333 3345565433 233223333444333334599999
Q ss_pred eCCCCccH--------------------------HHHHHhcccCCEEEEEecCC
Q 017064 267 NCVGGNSA--------------------------SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 267 d~~g~~~~--------------------------~~~~~~l~~~G~~v~~g~~~ 294 (378)
+++|.... ......++.+|+++.++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 99985210 12334456789999988543
No 143
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.91 E-value=0.0028 Score=57.52 Aligned_cols=240 Identities=15% Similarity=0.108 Sum_probs=127.7
Q ss_pred ccCCCceeEEEEEecCCCCCCCCCCEEeeCCCC--------------------------CcccccceeccCCceEEcCCC
Q 017064 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS--------------------------SGTWQSYVVKDQSVWHKVSKD 160 (378)
Q Consensus 107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--------------------------~G~~~~~~~~~~~~~~~iP~~ 160 (378)
.+|---+ ++|++ |.+.++.+|.||.+..+. .-.|..|.++..+..+ .
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y----~ 104 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAY----D 104 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCccc----C
Confidence 3444444 56666 788889999999987653 1123333333322211 0
Q ss_pred CCHhhhhhcccc-HHHHHHHHHHHhc---cCCCCEEEEeCCCchHHHHHHHHHH--HcCCcEEEEecCCCCcHHHHHHHH
Q 017064 161 SPMEYAATIIVN-PLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKLK 234 (378)
Q Consensus 161 ~~~~~aa~~~~~-~~ta~~~l~~~~~---~~~g~~VlV~g~~g~~G~~av~la~--~~g~~vi~~~~~~~~~~~~~~~~~ 234 (378)
-+.+..-++..+ +.|.|. |.+... .-..+.|+|..|++=.++..+.+++ ..+.+++.++ +.....+.+
T Consensus 105 ~~~e~~~~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-----S~~N~~Fve 178 (314)
T PF11017_consen 105 PEREDWQMLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-----SARNVAFVE 178 (314)
T ss_pred cchhHHHHHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-----cCcchhhhh
Confidence 012222222222 334442 322121 2334789999999999999999888 3456888887 666677888
Q ss_pred hCC-CcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCC-EEEEEecCCCCCccccchhhhhcCce
Q 017064 235 GLG-ADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGG-TMVTYGGMSKKPITVSTSAFIFKDLS 311 (378)
Q Consensus 235 ~~g-a~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~ 311 (378)
.+| .|.++.|++ |..+... ..-+++|.+|+..+ .....++...= ..+.+|......... ...+. +.+
T Consensus 179 ~lg~Yd~V~~Yd~-----i~~l~~~--~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~-~~~l~--g~~ 248 (314)
T PF11017_consen 179 SLGCYDEVLTYDD-----IDSLDAP--QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEA-PADLP--GPR 248 (314)
T ss_pred ccCCceEEeehhh-----hhhccCC--CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCc-cccCC--CCC
Confidence 998 467776654 4444333 36799999999765 44555555533 456666544332211 11111 111
Q ss_pred EEEEechhhhcc----ccHHHHHHHHHHHHHHHHcCCcccc-c-eeeccccHHHHHHHHHccCC
Q 017064 312 LKGFWLQKWLSS----EKATECRNMIDYLLCLAREGKLKYD-M-ELVPFNNFQTALSKALGLHG 369 (378)
Q Consensus 312 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~g~~~~~-~-~~~~l~~~~~a~~~~~~~~~ 369 (378)
...++....... ..++.+.+.+.+.+.-......... + +.-..+.+.++++.+.+++.
T Consensus 249 ~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 249 PEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred cEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence 111222111111 1122222223222222222223332 3 35789999999999987764
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.87 E-value=6.1e-05 Score=75.54 Aligned_cols=124 Identities=13% Similarity=0.085 Sum_probs=76.2
Q ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC-----------------CcHHHHHHHHhCCCcEEEccCc-
Q 017064 185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----------------GSDEAKEKLKGLGADEVFTESQ- 246 (378)
Q Consensus 185 ~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~ga~~vi~~~~- 246 (378)
...+|++|+|.|+ |+.|+.+++.++..|++|+++..... ....+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3678999999999 99999999999999999877652110 1245667788999988776543
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCCCCCccccchhhhhcCceEEEE
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGF 315 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 315 (378)
.+.. ..... . ++|+||+++|.... ...+.....+|.+..++.... ..... .....+++.+.|.
T Consensus 212 ~~~~-~~~~~-~--~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~-~~~~~-~~~~gk~v~ViGg 275 (564)
T PRK12771 212 EDIT-LEQLE-G--EFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRA-VGEGE-PPFLGKRVVVIGG 275 (564)
T ss_pred CcCC-HHHHH-h--hCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHH-hhccC-CcCCCCCEEEECC
Confidence 2211 11111 1 39999999997542 333444455565544432111 00111 2234566777663
No 145
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.77 E-value=0.00053 Score=65.75 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=71.2
Q ss_pred HHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064 176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (378)
Q Consensus 176 a~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~ 254 (378)
.+.++.+..+ .-.|++|+|.|. |.+|...++.++.+|++|+++.+ ++.+...+...|+..+ . +.+
T Consensus 240 ~~d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~----dp~~a~~A~~~G~~~~------~---lee 305 (476)
T PTZ00075 240 LIDGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEI----DPICALQAAMEGYQVV------T---LED 305 (476)
T ss_pred HHHHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CchhHHHHHhcCceec------c---HHH
Confidence 3344444332 457899999999 99999999999999999887753 3334333344565432 1 222
Q ss_pred HhcCCCCCcEEEeCCCCccH--HHHHHhcccCCEEEEEecC
Q 017064 255 LLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~~~~--~~~~~~l~~~G~~v~~g~~ 293 (378)
+.. ..|+|+.++|...+ ...+..|++++.++.+|-.
T Consensus 306 ll~---~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 306 VVE---TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred HHh---cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 222 39999999997544 5889999999999999844
No 146
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.76 E-value=1.6e-05 Score=76.58 Aligned_cols=144 Identities=19% Similarity=0.196 Sum_probs=89.5
Q ss_pred ccCCCceeEEEEEecCCCCCCCCCCEEe-eCCCC---------------CcccccceeccCCceEEcCCCCCHhhhhhcc
Q 017064 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPS---------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (378)
Q Consensus 107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~---------------~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~ 170 (378)
..-|||+++.+.+|++++++.-.|+.-+ +.... .+.|++.+ ++|+.+..+.+.. .
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~--------~~~k~v~~~t~i~-~ 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAF--------SVAKRVRTETGIG-A 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH--------HHHhhHhhhcCCC-C
Confidence 4579999999999999998866776432 11100 23333333 3344443332222 2
Q ss_pred ccHHHHHHHHHHHhc---cCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHH-HHHHHhCCCcEEEccC
Q 017064 171 VNPLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEA-KEKLKGLGADEVFTES 245 (378)
Q Consensus 171 ~~~~ta~~~l~~~~~---~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~~ 245 (378)
.+.+.++.++..... -.++++|+|.|+ |.+|.++++.++..|+ +++++.+ +.++ .++++.+|.+ +++.
T Consensus 161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r----~~~ra~~la~~~g~~-~~~~- 233 (423)
T PRK00045 161 GAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANR----TLERAEELAEEFGGE-AIPL- 233 (423)
T ss_pred CCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeC----CHHHHHHHHHHcCCc-EeeH-
Confidence 234556666654222 257899999999 9999999999999998 5555553 4555 3466778764 3322
Q ss_pred cccHHHHHHHhcCCCCCcEEEeCCCCcc
Q 017064 246 QLEVKNVKGLLANLPEPALGFNCVGGNS 273 (378)
Q Consensus 246 ~~~~~~i~~~~~~~g~~Dvvid~~g~~~ 273 (378)
+....... ++|+||+|+|.+.
T Consensus 234 ----~~~~~~l~---~aDvVI~aT~s~~ 254 (423)
T PRK00045 234 ----DELPEALA---EADIVISSTGAPH 254 (423)
T ss_pred ----HHHHHHhc---cCCEEEECCCCCC
Confidence 22223233 3999999999754
No 147
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.66 E-value=0.00027 Score=67.96 Aligned_cols=143 Identities=17% Similarity=0.230 Sum_probs=90.4
Q ss_pred ccCCCceeEEEEEecCCCCCCCCCCEEee-CCC---------------CCcccccceeccCCceEE---c-CCCCCHhhh
Q 017064 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIP-SPP---------------SSGTWQSYVVKDQSVWHK---V-SKDSPMEYA 166 (378)
Q Consensus 107 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~---------------~~G~~~~~~~~~~~~~~~---i-P~~~~~~~a 166 (378)
..-|.|++|.+.+|++++++.-.|+.-++ -.. ..+.|++++.++. .+.. + +..+|...+
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~ 166 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA 166 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence 45789999999999999988667764321 100 0467888888776 3222 3 333333222
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHH-HHHHHhCCCcEEEcc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEA-KEKLKGLGADEVFTE 244 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~ 244 (378)
| ..-..+.....++++|+|.|+ |.+|..+++.++..|+ +++++.+ +.++ .++++.+|... ++.
T Consensus 167 A---------v~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r----s~~ra~~la~~~g~~~-i~~ 231 (417)
T TIGR01035 167 A---------VELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANR----TYERAEDLAKELGGEA-VKF 231 (417)
T ss_pred H---------HHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC----CHHHHHHHHHHcCCeE-eeH
Confidence 2 111122233467899999999 9999999999999995 5666653 4444 44667777643 222
Q ss_pred CcccHHHHHHHhcCCCCCcEEEeCCCCcc
Q 017064 245 SQLEVKNVKGLLANLPEPALGFNCVGGNS 273 (378)
Q Consensus 245 ~~~~~~~i~~~~~~~g~~Dvvid~~g~~~ 273 (378)
+.+.+... ++|+||+|++.+.
T Consensus 232 -----~~l~~~l~---~aDvVi~aT~s~~ 252 (417)
T TIGR01035 232 -----EDLEEYLA---EADIVISSTGAPH 252 (417)
T ss_pred -----HHHHHHHh---hCCEEEECCCCCC
Confidence 22333333 3999999998744
No 148
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.63 E-value=0.0042 Score=56.52 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=68.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|++++|.|. |.+|...+..++.+|++|++..| +.++.+.+.+.|...+ . ..++.+... +.|+||+
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R----~~~~~~~~~~~g~~~~-~-----~~~l~~~l~---~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGAR----SSADLARITEMGLIPF-P-----LNKLEEKVA---EIDIVIN 215 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCeee-c-----HHHHHHHhc---cCCEEEE
Confidence 4789999999 99999999999999999888874 4556556666665422 1 123344443 3999999
Q ss_pred CCCCccH-HHHHHhcccCCEEEEEecCC
Q 017064 268 CVGGNSA-SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 268 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 294 (378)
++....+ ...++.++++..++.++..+
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCC
Confidence 9976544 45778899998899888543
No 149
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.63 E-value=0.00089 Score=59.98 Aligned_cols=107 Identities=21% Similarity=0.269 Sum_probs=67.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EE--ccCcccHHHHH----HHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VF--TESQLEVKNVK----GLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~-vi--~~~~~~~~~i~----~~~~~~ 259 (378)
.|+.|+|+||++|+|...+.-.-..|++++.+++... ..++. +.+++.+... ++ ..+-.+.+++. ......
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~r-rl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRAR-RLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhh-hHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999999998888777778999888886532 23333 5556555444 22 11111222222 222344
Q ss_pred CCCcEEEeCCCCccH--------------------------HHHHHhcccC--CEEEEEecCCC
Q 017064 260 PEPALGFNCVGGNSA--------------------------SKVLKFLSQG--GTMVTYGGMSK 295 (378)
Q Consensus 260 g~~Dvvid~~g~~~~--------------------------~~~~~~l~~~--G~~v~~g~~~~ 295 (378)
|++|+.|+++|-... +.++..|++. |++|.++...+
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 569999999984211 3355566554 99999986655
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.61 E-value=0.00051 Score=59.51 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=58.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC--cE--EEccCcc-cH-HHHHHHhcCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--DE--VFTESQL-EV-KNVKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga--~~--vi~~~~~-~~-~~i~~~~~~~g 260 (378)
.++.++|+||++++|.+.++.....|++|+.+.| ..++++.+ .+++. -. .+|-.+. .. ..+..+....+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR----R~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec----cHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 3578999999999999999999999999999996 56666544 56773 22 2333332 22 23455566666
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
.+|+.++++|-
T Consensus 81 ~iDiLvNNAGl 91 (246)
T COG4221 81 RIDILVNNAGL 91 (246)
T ss_pred cccEEEecCCC
Confidence 79999999995
No 151
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.61 E-value=0.00053 Score=63.28 Aligned_cols=109 Identities=19% Similarity=0.178 Sum_probs=74.8
Q ss_pred CceEEcCCCCCHhhhhhccccHHHHHHHHHHHhcc---CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH
Q 017064 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL---NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228 (378)
Q Consensus 152 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~---~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~ 228 (378)
...+++|+.+..+.++... +.+.++.++...... -++.+|+|.|+ |.+|..+++.++..|++.+.+++ .+.+
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~---r~~~ 213 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIAN---RTYE 213 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEe---CCHH
Confidence 5677788998888777665 456677676542222 36899999999 99999999999988875555443 2445
Q ss_pred H-HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064 229 A-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA 274 (378)
Q Consensus 229 ~-~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~ 274 (378)
+ .++++++|+. +++. +.+.+... ..|+||.|++.+..
T Consensus 214 ra~~la~~~g~~-~~~~-----~~~~~~l~---~aDvVi~at~~~~~ 251 (311)
T cd05213 214 RAEELAKELGGN-AVPL-----DELLELLN---EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHHHcCCe-EEeH-----HHHHHHHh---cCCEEEECCCCCch
Confidence 4 4677788874 3322 12223233 38999999998765
No 152
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00087 Score=62.62 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~ 258 (378)
.+++++|+|+++++|...++.+...|++|+++.+. +++. +.+++.|.+.. +..+-.+.+.+. .....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~----~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARG----EEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999998899999998863 3333 23344565433 222222222222 22222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.|.+|++|+++|.
T Consensus 83 ~g~iD~lInnAg~ 95 (334)
T PRK07109 83 LGPIDTWVNNAMV 95 (334)
T ss_pred CCCCCEEEECCCc
Confidence 3459999999985
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0015 Score=59.32 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH----HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN----VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~----i~~~~~~~g~ 261 (378)
.+++|+|+|++|++|...++.+...|++|+++.+ ++++.+.+...+...+ .|..+. ..+. +.+..++ .
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r----~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g--~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCR----KEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGG--R 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCC--C
Confidence 4678999999999999999988889999999985 4556666655565443 233222 2222 2222222 5
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 77 id~li~~Ag~ 86 (277)
T PRK05993 77 LDALFNNGAY 86 (277)
T ss_pred ccEEEECCCc
Confidence 9999999873
No 154
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.53 E-value=0.0012 Score=64.99 Aligned_cols=109 Identities=14% Similarity=0.180 Sum_probs=69.5
Q ss_pred HHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---h-----CCC-----cEEEcc
Q 017064 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---G-----LGA-----DEVFTE 244 (378)
Q Consensus 179 ~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~-----~ga-----~~vi~~ 244 (378)
+.-...+.+.|++|||+||+|++|...++.+...|++|++++|. .++.+.+ . + .|. ..++..
T Consensus 70 ~~~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~g 145 (576)
T PLN03209 70 AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVEC 145 (576)
T ss_pred ccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHHHhhhhccccccccccCceEEEEe
Confidence 33344567789999999999999999999998899999999863 4443322 1 1 121 122322
Q ss_pred CcccHHHHHHHhcCCCCCcEEEeCCCCcc----------------HHHHHHhccc--CCEEEEEecCC
Q 017064 245 SQLEVKNVKGLLANLPEPALGFNCVGGNS----------------ASKVLKFLSQ--GGTMVTYGGMS 294 (378)
Q Consensus 245 ~~~~~~~i~~~~~~~g~~Dvvid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 294 (378)
+-.+.+.+.+..+ ++|+||+++|... ....++.+.. .|+||+++...
T Consensus 146 DLtD~esI~~aLg---giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 146 DLEKPDQIGPALG---NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred cCCCHHHHHHHhc---CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 3233455665554 3999999998531 1223333332 37999998653
No 155
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00036 Score=65.05 Aligned_cols=80 Identities=29% Similarity=0.343 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHHHH----hcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVKGL----LAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~~~----~~~ 258 (378)
.++++||+|+++++|...++.+...|++|+++.+. +++. +.+++.|.+.. +..+-.+.+.+.++ ...
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARD----EEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999988853 4443 23345665543 22222222222222 112
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.|++|++|+++|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999984
No 156
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.51 E-value=0.00082 Score=56.74 Aligned_cols=93 Identities=19% Similarity=0.334 Sum_probs=65.9
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~ 271 (378)
|+|+||+|.+|...++.+...|.+|++++|. +++.+. ..+.+ ++..+-.+.+.+.+...+ +|+||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~----~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~---~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS----PSKAED--SPGVE-IIQGDLFDPDSVKAALKG---ADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESS----GGGHHH--CTTEE-EEESCTTCHHHHHHHHTT---SSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecC----chhccc--ccccc-cceeeehhhhhhhhhhhh---cchhhhhhhh
Confidence 7999999999999999999999999999975 333333 34444 344444455667776664 9999999984
Q ss_pred c-----cHHHHHHhcccCC--EEEEEecCC
Q 017064 272 N-----SASKVLKFLSQGG--TMVTYGGMS 294 (378)
Q Consensus 272 ~-----~~~~~~~~l~~~G--~~v~~g~~~ 294 (378)
. .....++.++..| ++++++...
T Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 71 PPKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred hcccccccccccccccccccccceeeeccc
Confidence 2 2345556555444 888887544
No 157
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.002 Score=58.31 Aligned_cols=78 Identities=18% Similarity=0.186 Sum_probs=52.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcEEE
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPALGF 266 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dvvi 266 (378)
+++||+||+|++|...++.+...|++|+++.+ +.++.+.+...+...+ .|..+. ..++ +.......+++|++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 77 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATAR----KAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI 77 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999889999999885 4555555555555433 233332 2222 222222334599999
Q ss_pred eCCCC
Q 017064 267 NCVGG 271 (378)
Q Consensus 267 d~~g~ 271 (378)
+++|.
T Consensus 78 ~~ag~ 82 (274)
T PRK05693 78 NNAGY 82 (274)
T ss_pred ECCCC
Confidence 99984
No 158
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.48 E-value=0.0017 Score=58.23 Aligned_cols=83 Identities=10% Similarity=-0.012 Sum_probs=50.9
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHH----HHHHhcCCC
Q 017064 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKN----VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~----i~~~~~~~g 260 (378)
.|+++||+|++ +++|.+.++.+...|++|+++.+... ..++.+ ..++++....+..+-.+.+. +.+.....|
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-ARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999997 48999999988889999988875321 122222 23344543344333222222 222222334
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
.+|++|+++|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 69999999974
No 159
>PRK06182 short chain dehydrogenase; Validated
Probab=97.45 E-value=0.0024 Score=57.78 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL 264 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dv 264 (378)
.+++++|+|++|++|...++.+...|++|+++.+ +.++.+.+...+...+ .|..+. ..+. +.+.....+++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAAR----RVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3679999999999999999998889999999885 4555544444444332 232222 2222 2222223345999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
+|+++|.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999984
No 160
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.44 E-value=0.00066 Score=57.70 Aligned_cols=105 Identities=22% Similarity=0.266 Sum_probs=73.3
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcccHHHHHHHhcC
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLAN 258 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~i~~~~~~ 258 (378)
+.+...+++|++||=.|+ +.|+.++-+|+..| +|+.+-+...-.+..+..++.+|.+.+. ...+.+ +-+. .
T Consensus 64 m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~----~G~~-~ 135 (209)
T COG2518 64 MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS----KGWP-E 135 (209)
T ss_pred HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc----cCCC-C
Confidence 335588999999999995 78999999999888 8888875432222244556778885442 222211 1111 1
Q ss_pred CCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEec
Q 017064 259 LPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 259 ~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~ 292 (378)
.+.||.++-+++.+.. +..++.|++||+++..-+
T Consensus 136 ~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 136 EAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 1249999988888777 677899999999988764
No 161
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0014 Score=58.21 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHHHH----hcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGL----LAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~~~----~~~ 258 (378)
++.+++|+|++|++|...+..+...|++++++.+. +++.+ .++..+... ++..+-.+.+.+.+. ...
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL----AAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999988899999888753 33322 223334332 222222222222222 222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|.++|.
T Consensus 82 ~~~id~vi~~ag~ 94 (250)
T PRK12939 82 LGGLDGLVNNAGI 94 (250)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999985
No 162
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0012 Score=58.58 Aligned_cols=79 Identities=23% Similarity=0.291 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
.+.+++|+|++|++|...++.+...|++|+++.+ +.++.+.+ ...+... +..+-.+.+.+.+.....+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAAR----NAAALDRLAGETGCEP-LRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCeE-EEecCCCHHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999999999988875 34444333 3445433 2222222233444333334599999
Q ss_pred eCCCC
Q 017064 267 NCVGG 271 (378)
Q Consensus 267 d~~g~ 271 (378)
+++|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 99985
No 163
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.40 E-value=0.0019 Score=58.52 Aligned_cols=106 Identities=17% Similarity=0.191 Sum_probs=65.3
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLE---VKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g 260 (378)
.|+++||+|++ +++|++.++.+...|++|+++.+.. ...++.+. ..+++....+..+-.+ ++. +.+.....|
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-ALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999996 6999999998888999999877531 11223332 2445544333222222 222 222223334
Q ss_pred CCcEEEeCCCCc-------c--------H---------------HHHHHhcccCCEEEEEecCC
Q 017064 261 EPALGFNCVGGN-------S--------A---------------SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 261 ~~Dvvid~~g~~-------~--------~---------------~~~~~~l~~~G~~v~~g~~~ 294 (378)
++|++|+++|.. . + +..+..+..+|+++.++...
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 699999999841 0 0 23455677789999987543
No 164
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.006 Score=54.57 Aligned_cols=84 Identities=20% Similarity=0.244 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~ 261 (378)
.+++++|.|++|++|...++.+...|++ |+++.+......+..+.++..+.... + |..+. .+.+ +.......++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5689999999999999999999999999 77776531111111223334454322 2 22221 1222 1222122235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 165
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.36 E-value=0.0016 Score=58.07 Aligned_cols=82 Identities=22% Similarity=0.282 Sum_probs=58.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EEccCc-ccH----HHHHHHhcCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQ-LEV----KNVKGLLANL 259 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~--vi~~~~-~~~----~~i~~~~~~~ 259 (378)
-.|+.|||+|+++++|.+.++-...+|++++.+.....+.++..+..+..|-.+ ..|-.+ +++ +++++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~--- 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV--- 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc---
Confidence 348999999999999998887777789987777766667777778888776322 333333 222 3444444
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
|.+|++++++|-
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 359999999984
No 166
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.36 E-value=0.0026 Score=56.96 Aligned_cols=84 Identities=14% Similarity=0.177 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.+.++||+|++|++|...++.+...|++|+++.+......+..+.+++.|.... +..+-.+.+.+. ......+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999888643212222333444554432 222222222221 111122359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.|+|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999985
No 167
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0019 Score=58.05 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCCc-EEEccCccc---HHHHHHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGAD-EVFTESQLE---VKNVKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~ga~-~vi~~~~~~---~~~i~~~~~~ 258 (378)
.|+++||+|+++++|...++.+...|++|+++.+. .++.+.+ ++ .+.+ ..+..+-.+ .+.+.+....
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRN----EENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 47899999999999999999999999999988753 3332222 22 1322 222222222 2222211112
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.|++|++|+++|.
T Consensus 83 ~g~iD~lv~nag~ 95 (263)
T PRK08339 83 IGEPDIFFFSTGG 95 (263)
T ss_pred hCCCcEEEECCCC
Confidence 3469999999984
No 168
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0039 Score=55.94 Aligned_cols=80 Identities=13% Similarity=0.183 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EEccCcccHHH----HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VFTESQLEVKN----VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~ 261 (378)
.+++++|+|+++++|...++.+...|++|+++.+. .++. +..++++... .+..+-.+.+. +.......+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDID----ADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999988899999988853 3333 3334455322 22222222222 2222222335
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 81 id~lv~~ag~ 90 (261)
T PRK08265 81 VDILVNLACT 90 (261)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 169
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0016 Score=59.69 Aligned_cols=79 Identities=18% Similarity=0.307 Sum_probs=50.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHH----HHHhcCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNV----KGLLANL 259 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~ 259 (378)
+.+++|+|++|++|...++.+...|++|+++.+. .++.+ .+.+.+.+. .+..+-.+.+.+ .......
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~----~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARR----EDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999888889999999863 33332 223334332 222222222222 2222223
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
|.+|++|+|+|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 359999999984
No 170
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0062 Score=54.06 Aligned_cols=105 Identities=14% Similarity=0.186 Sum_probs=61.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~ 261 (378)
.++++||+|++|++|...+..+...|.+|+++.|......++ .+.++..+.. ..+..+-.+.+.+ .+.....++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 467999999999999999998888899999887642111111 1122333432 2222222222222 222222235
Q ss_pred CcEEEeCCCCcc--------------------HHHHHHhcccCCEEEEEec
Q 017064 262 PALGFNCVGGNS--------------------ASKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 262 ~Dvvid~~g~~~--------------------~~~~~~~l~~~G~~v~~g~ 292 (378)
+|++|.++|... ++.+...+..+|++++++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 999999887421 1334555566789998875
No 171
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0014 Score=58.24 Aligned_cols=84 Identities=15% Similarity=0.193 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccC--c-ccHHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~--~-~~~~~-i~~~~~~~g~~ 262 (378)
+++++||+|++|++|+..++.+...|++|+++.+.....++..+.++..+... .+..+ + ...++ +.......+.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999899999888753211111222233445442 22222 2 12222 22222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|.+|+++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999883
No 172
>PRK06128 oxidoreductase; Provisional
Probab=97.24 E-value=0.004 Score=57.20 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=64.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC--cHHHHHHHHhCCCcEE-EccCcccHHH----HHHHhcCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKLKGLGADEV-FTESQLEVKN----VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~--~~~~~~~~~~~ga~~v-i~~~~~~~~~----i~~~~~~~g 260 (378)
.++++||+|+++++|...+..+...|++|+++.+.... .++..+.++..|.... +..+-.+.+. +.+.....+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999888899999877643210 1112233444554332 2222222222 222222233
Q ss_pred CCcEEEeCCCCcc---------------------------HHHHHHhcccCCEEEEEecCC
Q 017064 261 EPALGFNCVGGNS---------------------------ASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 261 ~~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~ 294 (378)
++|++|+++|... .+.++..++++|+++.++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 5999999998410 023345566789999987543
No 173
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0032 Score=55.45 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCC---CcEEEccCcccHHH----HHHHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLG---ADEVFTESQLEVKN----VKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g---a~~vi~~~~~~~~~----i~~~~~~~ 259 (378)
.+.+++|+|++|++|...++.+...|++|+++.+. +++.. ..+++. .-+.+..+-.+.+. +.......
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARD----QKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC----HHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999998888889999998853 33332 223332 12222222222222 22222222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
+++|++|++.|.
T Consensus 81 ~~~d~vi~~ag~ 92 (237)
T PRK07326 81 GGLDVLIANAGV 92 (237)
T ss_pred CCCCEEEECCCC
Confidence 359999999874
No 174
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.20 E-value=0.0021 Score=57.19 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=55.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-h----CCCcE-EEccC--c-ccHHHHHHHhc
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G----LGADE-VFTES--Q-LEVKNVKGLLA 257 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~----~ga~~-vi~~~--~-~~~~~i~~~~~ 257 (378)
..+.++||+||++++|...+..+...|.+++.+.| +++|++.+. + .|... ++..| + ...+.+.....
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR----~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVAR----REDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----cHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence 45789999999999999999999999999999996 566665442 2 33222 33322 2 23344444333
Q ss_pred CC-CCCcEEEeCCCC
Q 017064 258 NL-PEPALGFNCVGG 271 (378)
Q Consensus 258 ~~-g~~Dvvid~~g~ 271 (378)
.. +.+|+.|+++|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 32 349999999994
No 175
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.19 E-value=0.0024 Score=53.69 Aligned_cols=77 Identities=21% Similarity=0.191 Sum_probs=55.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-C--cEEEccCccc-----HHHHHHHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-A--DEVFTESQLE-----VKNVKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a--~~vi~~~~~~-----~~~i~~~~~~~ 259 (378)
.|-+|||+|+++++|+..++-....|-+||++.| ++++++.++..- . ..+.|-.+.+ ++.+++..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR----~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-- 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGR----NEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-- 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC----cHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC--
Confidence 4789999999999999999999999999999985 788888776422 2 2223333322 233444444
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
..+++|+|+|-
T Consensus 78 -~lNvliNNAGI 88 (245)
T COG3967 78 -NLNVLINNAGI 88 (245)
T ss_pred -chheeeecccc
Confidence 48999999983
No 176
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.19 E-value=0.0056 Score=52.59 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=63.0
Q ss_pred HhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCC-CcEEEccCcccHHHHHHH
Q 017064 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLG-ADEVFTESQLEVKNVKGL 255 (378)
Q Consensus 183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g-a~~vi~~~~~~~~~i~~~ 255 (378)
...+.++++||-.|+ |. |..++++|+..+ .+++++. .+++..+.+ +.+| .+.+.... .+..+....
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD----~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~ 107 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVD----KDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFT 107 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEE----CCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhh
Confidence 367889999999998 55 999999998764 4677776 355555544 3466 33222111 111221111
Q ss_pred hcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEE
Q 017064 256 LANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTY 290 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~ 290 (378)
..+ .+|.||...+.. .+..+.+.|+++|+++..
T Consensus 108 ~~~--~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 108 INE--KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred cCC--CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 122 499999866543 346778899999999853
No 177
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.19 E-value=0.0017 Score=58.71 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=51.6
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLE---VKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g 260 (378)
.++++||+|+++ ++|.+.++.+...|++|+++.+... ..++.+ ..+++|....+..+-.+ ++. +.+.....|
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 578999999986 9999999999889999988765311 122222 22345644333223222 222 222223334
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
.+|++|+++|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 69999999984
No 178
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.18 E-value=0.0043 Score=55.06 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC--Cc-EEEccCcccHHHHH----HHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVFTESQLEVKNVK----GLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g--a~-~vi~~~~~~~~~i~----~~~~~~ 259 (378)
.+.++||+|++|++|...++.+...|++|+++.|. .++.+.+ ..+. .. ..+..+-.+.+.+. ......
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN----EEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45799999999999999998888889999999864 3333222 2222 21 12222222222222 221222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
+.+|++|.++|.
T Consensus 80 ~~~d~vi~~ag~ 91 (251)
T PRK07231 80 GSVDILVNNAGT 91 (251)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 179
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0058 Score=55.20 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=47.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE----EccCcc-cHHH-HHHHhcCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV----FTESQL-EVKN-VKGLLANLP 260 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v----i~~~~~-~~~~-i~~~~~~~g 260 (378)
+++|+|++|++|...++.+...|++|+++.+. +++. +.++..+...+ .|..+. .... +.+.....+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRD----ADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999888899998887753 3332 22233444321 233322 1222 222222233
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
++|++|+++|.
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 59999999984
No 180
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.15 E-value=0.021 Score=46.78 Aligned_cols=100 Identities=14% Similarity=0.150 Sum_probs=64.5
Q ss_pred HHHHHHHHhc-cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH
Q 017064 176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (378)
Q Consensus 176 a~~~l~~~~~-~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~ 254 (378)
.+.++.+..+ .-.|++++|.|= |-+|...++.++.+|++|+++. .++-+.-.+..-|.+.. .+.+
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e----~DPi~alqA~~dGf~v~---------~~~~ 74 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTE----IDPIRALQAAMDGFEVM---------TLEE 74 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-----SSHHHHHHHHHTT-EEE----------HHH
T ss_pred HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEE----CChHHHHHhhhcCcEec---------CHHH
Confidence 4555554444 567999999998 9999999999999999999887 35655555555565432 2333
Q ss_pred HhcCCCCCcEEEeCCCCccH--HHHHHhcccCCEEEEEec
Q 017064 255 LLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 255 ~~~~~g~~Dvvid~~g~~~~--~~~~~~l~~~G~~v~~g~ 292 (378)
... ..|++|.++|...+ .+-++.|+++--+..+|.
T Consensus 75 a~~---~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 75 ALR---DADIFVTATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp HTT---T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred HHh---hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence 333 38999999998553 678889998888777773
No 181
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0025 Score=57.08 Aligned_cols=80 Identities=23% Similarity=0.286 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHh-CCCc-EEEccCcccHHHHHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGAD-EVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~ga~-~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
.+++++|.|+++++|...++.+...|++|+++.+. .++.+. +.. .+.. ..+..+-.+.+.+.+.....+.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 46899999999999999999888899999988853 333322 222 2322 2232232333444444333346
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 182
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.003 Score=56.65 Aligned_cols=83 Identities=13% Similarity=0.215 Sum_probs=49.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHH----HHHhcCCCCCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNV----KGLLANLPEPA 263 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i----~~~~~~~g~~D 263 (378)
+.++||.|++|++|...++.+...|++|+++.+.....++..+.++..+.... +..+-.+.+.+ .......+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999999999889999999988642111111222334444322 22222222222 22222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|.|+|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999974
No 183
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.14 E-value=0.0029 Score=60.02 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHH
Q 017064 173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 252 (378)
Q Consensus 173 ~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i 252 (378)
....+..+.+..++++|++||-.|+ +.|..+..+++..|++|+++. .+++..+.+++.....-+.....+ .
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giD----lS~~~l~~A~~~~~~l~v~~~~~D---~ 222 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVT----ISAEQQKLAQERCAGLPVEIRLQD---Y 222 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhccCeEEEEECc---h
Confidence 4455666666788999999999997 678888999998899998887 577887777653322111111112 1
Q ss_pred HHHhcCCCCCcEEEeC-----CCC----ccHHHHHHhcccCCEEEEEe
Q 017064 253 KGLLANLPEPALGFNC-----VGG----NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~-----~g~----~~~~~~~~~l~~~G~~v~~g 291 (378)
..+ .+ .+|.|+.. +|. ..++.+.+.|+|||.++...
T Consensus 223 ~~l-~~--~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 RDL-NG--QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhc-CC--CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 222 22 49998743 333 23477889999999998764
No 184
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0025 Score=56.91 Aligned_cols=77 Identities=16% Similarity=0.061 Sum_probs=50.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcE-EEccCcccHHHHHHHhcCCCCCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~-vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
+.++||+|++|++|...++.+...|++|+++++. .++.+.+ +..+... ++..+-.+.+.+.+...+ ++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW--DVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC--CCC
Confidence 4689999999999999999999999999998863 3332222 2333322 222222233445554443 499
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|+++|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999983
No 185
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.12 E-value=0.0052 Score=55.00 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=77.9
Q ss_pred CCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----
Q 017064 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK---- 234 (378)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~---- 234 (378)
+.+++++| -..++..+.+..+++||++||=.|+ |-|.+++.+|+..|++|++++ -++++.+.++
T Consensus 49 ~~~tL~eA------Q~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvT----lS~~Q~~~~~~r~~ 116 (283)
T COG2230 49 PDMTLEEA------QRAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVT----LSEEQLAYAEKRIA 116 (283)
T ss_pred CCCChHHH------HHHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEee----CCHHHHHHHHHHHH
Confidence 33455555 3456667777899999999999997 778999999999999999999 5666665553
Q ss_pred hCCCcEEEccCcccHHHHHHHhcCCCCCcEEE-----eCCCCc----cHHHHHHhcccCCEEEEEecC
Q 017064 235 GLGADEVFTESQLEVKNVKGLLANLPEPALGF-----NCVGGN----SASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 235 ~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi-----d~~g~~----~~~~~~~~l~~~G~~v~~g~~ 293 (378)
+.|...-+ +...+..+...+ .||-|+ +.+|.. .+..+.++|+++|++.+..-.
T Consensus 117 ~~gl~~~v---~v~l~d~rd~~e---~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 117 ARGLEDNV---EVRLQDYRDFEE---PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred HcCCCccc---EEEecccccccc---ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 46654111 000111112211 266665 345542 247888999999999887743
No 186
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0027 Score=58.22 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC--cEE---EccCcc-cHHH-HHHHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--DEV---FTESQL-EVKN-VKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga--~~v---i~~~~~-~~~~-i~~~~~~~ 259 (378)
.|+++||+|++|++|...++.+...|++|+++.+ ++++.+ ..++++. +.. .|..+. .++. +.+.....
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDL----EEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999988885 344433 3344542 211 222221 1222 22222222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
|++|++|+++|.
T Consensus 84 g~id~vI~nAG~ 95 (296)
T PRK05872 84 GGIDVVVANAGI 95 (296)
T ss_pred CCCCEEEECCCc
Confidence 459999999985
No 187
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0028 Score=55.77 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL 264 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dv 264 (378)
+++++||+|++|++|...++.+...|++|+++.+......+..+.+...+...+ .|..+. ..+. +.......+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 478999999999999999998888899999988643212222222333343322 122221 1222 1222222235999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
||+++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999874
No 188
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.09 E-value=0.002 Score=57.68 Aligned_cols=77 Identities=14% Similarity=0.130 Sum_probs=48.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEEEccCcccHHHH----HHHhcCCCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTESQLEVKNV----KGLLANLPEP 262 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~vi~~~~~~~~~i----~~~~~~~g~~ 262 (378)
++||+|+++++|...++.+...|++|+++.+. +++.+ .+++.+..+.+..+-.+.+.+ .......+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRN----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999999888899999988753 33322 223334333333332222222 2222233459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 78 d~li~naG~ 86 (259)
T PRK08340 78 DALVWNAGN 86 (259)
T ss_pred CEEEECCCC
Confidence 999999984
No 189
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0038 Score=55.94 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=52.2
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc--EEEccCcccHHHHHH----Hh
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD--EVFTESQLEVKNVKG----LL 256 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~i~~----~~ 256 (378)
...-++.++||+|++|++|...+..+...|++|+++.+. ++..+.+ ...... .++..+-.+.+.+.. ..
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS----EAALAATAARLPGAKVTATVADVADPAQVERVFDTAV 81 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHH
Confidence 334577999999999999999999999999999888853 3333222 222211 222222222222221 11
Q ss_pred cCCCCCcEEEeCCCCc
Q 017064 257 ANLPEPALGFNCVGGN 272 (378)
Q Consensus 257 ~~~g~~Dvvid~~g~~ 272 (378)
...+++|+||.++|..
T Consensus 82 ~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 82 ERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHhCCCCEEEECCCCC
Confidence 1122499999999854
No 190
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0027 Score=57.05 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCc-EEEccCcccHHHH----HHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTESQLEVKNV----KGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~-~vi~~~~~~~~~i----~~~~~~ 258 (378)
++.++||+|++|++|...++.+...|++|+++.+. +++.+. ++..+.. .++..+-.+.+.+ ......
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999888899999988853 333222 2223322 2222222222222 222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|+++|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999984
No 191
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.06 E-value=0.013 Score=52.45 Aligned_cols=106 Identities=14% Similarity=0.207 Sum_probs=63.4
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC-CCc-EEE--ccCcc-cHHH-HHHHhcC
Q 017064 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL-GAD-EVF--TESQL-EVKN-VKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~-ga~-~vi--~~~~~-~~~~-i~~~~~~ 258 (378)
.|++++|+|++ +++|.+.++.+...|++|+.+.+.. ..+++.+.+ .++ +.. ..+ |-.+. .++. +.+....
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-RLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-cchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 46899999997 7999999988888999998876532 123333333 333 222 222 22221 2222 2223333
Q ss_pred CCCCcEEEeCCCCc-------cH-----------------------HHHHHhcccCCEEEEEecCC
Q 017064 259 LPEPALGFNCVGGN-------SA-----------------------SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 259 ~g~~Dvvid~~g~~-------~~-----------------------~~~~~~l~~~G~~v~~g~~~ 294 (378)
.|++|++|+|+|.. .+ +..+..++++|+++.++...
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 34699999998731 00 12345566789999988543
No 192
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0089 Score=53.50 Aligned_cols=78 Identities=18% Similarity=0.098 Sum_probs=48.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC-Cc-EEE--ccCcc-cHHH-HHHHhcC-CCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-AD-EVF--TESQL-EVKN-VKGLLAN-LPE 261 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g-a~-~vi--~~~~~-~~~~-i~~~~~~-~g~ 261 (378)
+++||+|++|++|...++.+...|++|+++.+ +.++.+.+ ..++ .. .++ |..+. .+.+ +...... .++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI----NEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999988888999999885 34444333 3332 11 222 22222 1222 2222111 235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.|+|.
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK08267 78 LDVLFNNAGI 87 (260)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 193
>PRK06196 oxidoreductase; Provisional
Probab=97.05 E-value=0.0032 Score=58.31 Aligned_cols=80 Identities=21% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHHHH----HhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKG----LLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i~~----~~~~~g~~ 262 (378)
.+.+|+|+|++|++|...+..+...|++|+++.|. .++.+ ...++..-.++..+-.+.+.+.+ .....+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~----~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR----PDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999999888899999998863 33332 22233212233222222222222 22222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 101 D~li~nAg~ 109 (315)
T PRK06196 101 DILINNAGV 109 (315)
T ss_pred CEEEECCCC
Confidence 999999983
No 194
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.004 Score=55.43 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.+++++|+|++|++|...++.+...|++|+++.+.. .++.+.... +....+..+-.+.+.+.+..+ ++|++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~---~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK---INNSESNDE-SPNEWIKWECGKEESLDKQLA---SLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc---hhhhhhhcc-CCCeEEEeeCCCHHHHHHhcC---CCCEEEE
Confidence 368999999999999999998888999999888642 122221111 112233223233344554443 4999999
Q ss_pred CCCC
Q 017064 268 CVGG 271 (378)
Q Consensus 268 ~~g~ 271 (378)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9985
No 195
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.011 Score=53.67 Aligned_cols=83 Identities=17% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cEEEccCccc---HHHHHHHhcCCCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLE---VKNVKGLLANLPEP 262 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga---~~vi~~~~~~---~~~i~~~~~~~g~~ 262 (378)
+.++||+|++|++|...+..+...|++|+++.+..+..++..+.....+. -.++..+-.+ .+.+.+.....+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 57899999999999999998888899999988642111111122222332 1222222222 22233333333459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.|+|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999884
No 196
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0035 Score=56.04 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~D 263 (378)
.|++|+|+|++|++|...++.+...|++|+++.+ ++.+.+ ...+++...+ .|..+. ...+ +.......+++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI----DPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999889999998875 333333 2334544322 232222 1222 222222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (255)
T PRK06057 82 IAFNNAGI 89 (255)
T ss_pred EEEECCCc
Confidence 99999874
No 197
>PRK06194 hypothetical protein; Provisional
Probab=97.04 E-value=0.004 Score=56.67 Aligned_cols=84 Identities=24% Similarity=0.270 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHHH----hcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGL----LANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~----~~~~g~~ 262 (378)
.+.++||+|++|++|...++.+...|++|+++.+.....++..+.+...+... ++..+-.+.+.+.+. ....+.+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999888889999888753211111112222224332 232232222222222 2222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
No 198
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0028 Score=57.47 Aligned_cols=84 Identities=20% Similarity=0.150 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.++++||+|+++++|...++.+...|++|+++.+..+..++..+.++..|.+. .+..+-.+.+.+. ......|.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999988899999887753211111112223344432 2222222222222 222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999984
No 199
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.04 E-value=0.0029 Score=53.33 Aligned_cols=88 Identities=16% Similarity=0.214 Sum_probs=60.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
-.|.+|.|+|. |.+|+..+++++.+|++|++..+. ..........+... ..+.++... .|+|+
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~----~~~~~~~~~~~~~~---------~~l~ell~~---aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRS----PKPEEGADEFGVEY---------VSLDELLAQ---ADIVS 96 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESS----CHHHHHHHHTTEEE---------SSHHHHHHH----SEEE
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEeccc----CChhhhccccccee---------eehhhhcch---hhhhh
Confidence 34899999999 999999999999999999999853 33322234444321 123333333 89999
Q ss_pred eCCCC-cc----H-HHHHHhcccCCEEEEEe
Q 017064 267 NCVGG-NS----A-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 267 d~~g~-~~----~-~~~~~~l~~~G~~v~~g 291 (378)
.+... +. + ...+..|+++..+|.++
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hhhccccccceeeeeeeeeccccceEEEecc
Confidence 88873 21 2 67899999999988876
No 200
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.03 E-value=0.0081 Score=58.60 Aligned_cols=82 Identities=15% Similarity=0.191 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEE-EccCcc-cHHHHHH-HhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEV-FTESQL-EVKNVKG-LLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~~v-i~~~~~-~~~~i~~-~~~~~g~~D 263 (378)
+++++||+|++|++|...++.+...|++|+++.+.. ..++ .+...+++...+ +|..+. ..+.+.. .....+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA--AGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 578999999999999999999999999999887531 2233 333445665432 233322 2222222 222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|+++|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999984
No 201
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.02 E-value=0.011 Score=52.72 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=62.3
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCccc---HHH-HHHHhcCC
Q 017064 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLE---VKN-VKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~---~~~-i~~~~~~~ 259 (378)
.|++++|+|++ +++|.+.++.+...|++|+++.+. ++..+.++++... +.+..+-.+ .++ +.+.....
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN----DRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc----hHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999998 699999999888899999988753 2222233333211 222222222 222 22222223
Q ss_pred CCCcEEEeCCCCcc------------------------------HHHHHHhcccCCEEEEEecCC
Q 017064 260 PEPALGFNCVGGNS------------------------------ASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 260 g~~Dvvid~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~ 294 (378)
|.+|++|+++|... .+..+..++.+|+++.++...
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 45999999998310 022345666789998887543
No 202
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.02 E-value=0.0032 Score=50.45 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=56.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHH-HHHhCCCc--EEEccCcccHHHHHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGAD--EVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
.+.+++|.|+ |++|.+++..+...|++ ++++.| +.+|.+ +++.++.. .++..+ ++..... .+|
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR----t~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~---~~D 77 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR----TPERAEALAEEFGGVNIEAIPLE-----DLEEALQ---EAD 77 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES----SHHHHHHHHHHHTGCSEEEEEGG-----GHCHHHH---TES
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC----CHHHHHHHHHHcCccccceeeHH-----HHHHHHh---hCC
Confidence 4789999999 99999999999999997 666654 455544 44455322 223322 2323333 399
Q ss_pred EEEeCCCCccH---HHHHHhccc-CCEEEEEe
Q 017064 264 LGFNCVGGNSA---SKVLKFLSQ-GGTMVTYG 291 (378)
Q Consensus 264 vvid~~g~~~~---~~~~~~l~~-~G~~v~~g 291 (378)
+||+|++.... ...+....+ -+.++.++
T Consensus 78 ivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla 109 (135)
T PF01488_consen 78 IVINATPSGMPIITEEMLKKASKKLRLVIDLA 109 (135)
T ss_dssp EEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-
T ss_pred eEEEecCCCCcccCHHHHHHHHhhhhceeccc
Confidence 99999987543 333333322 24666665
No 203
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0043 Score=56.05 Aligned_cols=79 Identities=13% Similarity=0.041 Sum_probs=50.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEE--ccCcc-cHHH-HHHHhcCCCCCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVF--TESQL-EVKN-VKGLLANLPEPA 263 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g~~D 263 (378)
+.++||+||+|++|...++.+...|++|+++.+ ++++.+. ...++....+ |..+. ..+. +.......+++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDL----DEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999888888999988875 4444433 3344422222 22221 1221 222222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|+++|.
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99999984
No 204
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0035 Score=55.94 Aligned_cols=80 Identities=15% Similarity=0.134 Sum_probs=49.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~ 258 (378)
.|+++||+|+++++|...++.+...|++|+++.+. .++.+ .++..+... .+..+-.+.+. +.+....
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARH----LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999988753 33332 223334322 22222112122 2222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.|++|++|+++|.
T Consensus 84 ~g~id~lv~~ag~ 96 (253)
T PRK05867 84 LGGIDIAVCNAGI 96 (253)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999884
No 205
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0035 Score=55.92 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=49.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCccc---HHH-HHHHhcCCCCCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLE---VKN-VKGLLANLPEPA 263 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~~D 263 (378)
|+++||+|+++++|...++.+...|++|+++.+.....++..+.++..+.. ..+..+-.+ .+. +.+.....+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 478999999999999999999999999988875321111111222223322 233333222 222 222222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|+++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999974
No 206
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0054 Score=54.78 Aligned_cols=81 Identities=17% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCC-cEEEccCcccHHHH----HHHhc
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGA-DEVFTESQLEVKNV----KGLLA 257 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga-~~vi~~~~~~~~~i----~~~~~ 257 (378)
..+++++|+|++|++|...+..+...|++|+++.+ ++++.+.+ +..+. ..++..+-.+.+.+ .....
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR----RVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999889999998885 34443322 22222 22332222222222 22222
Q ss_pred CCCCCcEEEeCCCC
Q 017064 258 NLPEPALGFNCVGG 271 (378)
Q Consensus 258 ~~g~~Dvvid~~g~ 271 (378)
..+.+|++|+++|.
T Consensus 83 ~~~~~d~li~~ag~ 96 (258)
T PRK06949 83 EAGTIDILVNNSGV 96 (258)
T ss_pred hcCCCCEEEECCCC
Confidence 22359999999984
No 207
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.011 Score=53.90 Aligned_cols=108 Identities=16% Similarity=0.220 Sum_probs=63.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLP 260 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g 260 (378)
-.+.++||+|++|++|...+..+...|++|+.+.+..... ++..+.++..|... .+..+-.+.+. +.+.....+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3468999999999999999988888899998887642111 12223333344332 22222222211 222222223
Q ss_pred CCcEEEeCCCCcc----H-----------------------HHHHHhcccCCEEEEEecCC
Q 017064 261 EPALGFNCVGGNS----A-----------------------SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 261 ~~Dvvid~~g~~~----~-----------------------~~~~~~l~~~G~~v~~g~~~ 294 (378)
++|++|.++|... + +.+...+++.|++|.++...
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 5999999988410 0 12344556778999988543
No 208
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.97 E-value=0.0048 Score=55.08 Aligned_cols=82 Identities=15% Similarity=0.205 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCccc---HHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLE---VKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g~~ 262 (378)
.|+++||+|+++++|...++.+...|++|+++.+.. .++..+.++..+.+.. +..+-.+ +.. +.+.....|++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999989999998876431 2222334445554322 2222222 222 22222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999984
No 209
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0039 Score=55.54 Aligned_cols=84 Identities=21% Similarity=0.288 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~~ 262 (378)
.+++++|+|++|++|...++.+...|++|+++.+.....++..+.++..+... .+..+-.+ ... +.......|++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888889999998864211111223333444332 22222221 111 11222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999984
No 210
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.005 Score=54.95 Aligned_cols=80 Identities=15% Similarity=0.259 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~ 258 (378)
.+++++|+|+++++|...+..+...|++|+.+.+. +++.+ .++..+.+. .+..+-.+.+. +.+....
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR----QAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999888899999998864 33332 233344332 22222222222 2222223
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+.+|++|+++|.
T Consensus 81 ~~~id~li~~ag~ 93 (254)
T PRK07478 81 FGGLDIAFNNAGT 93 (254)
T ss_pred cCCCCEEEECCCC
Confidence 3459999999984
No 211
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0049 Score=55.13 Aligned_cols=85 Identities=19% Similarity=0.193 Sum_probs=51.6
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCC-cHHHHHHHHhCCC-c-EEEccCccc---HHH-HHHHhc
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAG-SDEAKEKLKGLGA-D-EVFTESQLE---VKN-VKGLLA 257 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~-~~~~~~~~~~~ga-~-~vi~~~~~~---~~~-i~~~~~ 257 (378)
+..+.+|||+||+|++|...++-+... |++|+++.|..+. .++..+.++..+. + +++..+-.+ .++ +.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 566789999999999999999876666 5899999875321 1222233444443 1 233222222 222 333332
Q ss_pred CCCCCcEEEeCCCC
Q 017064 258 NLPEPALGFNCVGG 271 (378)
Q Consensus 258 ~~g~~Dvvid~~g~ 271 (378)
.+++|++|.++|.
T Consensus 85 -~g~id~li~~ag~ 97 (253)
T PRK07904 85 -GGDVDVAIVAFGL 97 (253)
T ss_pred -cCCCCEEEEeeec
Confidence 2359999988875
No 212
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.95 E-value=0.013 Score=49.99 Aligned_cols=78 Identities=18% Similarity=0.173 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC----CCcEEEccCcccHHHHHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----ga~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
.+.+++|+|++|++|...+..+...|++|+++.| +.++.+.+ ..+ +.... ..+..+.+++.+...+ .
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R----~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~---~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR----DLERAQKAADSLRARFGEGVG-AVETSDDAARAAAIKG---A 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhhcCCcEE-EeeCCCHHHHHHHHhc---C
Confidence 5689999999999999988888888999888875 34444333 222 33221 1111223344444443 9
Q ss_pred cEEEeCCCCcc
Q 017064 263 ALGFNCVGGNS 273 (378)
Q Consensus 263 Dvvid~~g~~~ 273 (378)
|+||.++....
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999888655
No 213
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0043 Score=55.66 Aligned_cols=86 Identities=17% Similarity=0.181 Sum_probs=50.9
Q ss_pred cCCCCEEEEeCCCc-hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEE--E--ccCcc-cHHHHH-HHhc
Q 017064 186 LNSGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEV--F--TESQL-EVKNVK-GLLA 257 (378)
Q Consensus 186 ~~~g~~VlV~g~~g-~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~v--i--~~~~~-~~~~i~-~~~~ 257 (378)
+..++++||+|++| ++|...++.+...|++|+++.+.....++..+.+++ +|...+ + |..+. ..+.+. ....
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44578999999986 899999999999999988877432111111222222 454332 2 22221 122222 2222
Q ss_pred CCCCCcEEEeCCCC
Q 017064 258 NLPEPALGFNCVGG 271 (378)
Q Consensus 258 ~~g~~Dvvid~~g~ 271 (378)
..|++|++|+++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 22359999999984
No 214
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.94 E-value=0.011 Score=56.46 Aligned_cols=110 Identities=15% Similarity=0.243 Sum_probs=64.5
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH---HHHHHHHhCCCcEEEccCcccHHHHHHHhcCCC
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD---EAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~---~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g 260 (378)
.+-..+.+|||+|++|.+|...+..+...|.+|++++|...... ...+......-..++..+-.+.+.+.+...+.+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence 34456789999999999999999998888999999987532111 011111222222233233233344544443321
Q ss_pred -CCcEEEeCCCCcc------H-------HHHHHhcccC--CEEEEEecC
Q 017064 261 -EPALGFNCVGGNS------A-------SKVLKFLSQG--GTMVTYGGM 293 (378)
Q Consensus 261 -~~Dvvid~~g~~~------~-------~~~~~~l~~~--G~~v~~g~~ 293 (378)
++|+||+|++... . ...++.+... +++|+++..
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 3999999987421 1 2334444333 478888754
No 215
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.93 E-value=0.0083 Score=52.83 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=58.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~ 271 (378)
|+|.|++|.+|...++.+...+.+|.+.+|.. +.++.+.++..|+..+ ..+-.+.+.+.+...| +|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g---~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAEVV-EADYDDPESLVAALKG---VDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTT---CSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccceEe-ecccCCHHHHHHHHcC---CceEEeecCc
Confidence 79999999999999999998999999999863 4556677788999654 4444455677777765 9999999984
No 216
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0042 Score=57.44 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=31.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.|++++|+|+++++|...+..+...|++|++++|.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999998888899999999864
No 217
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0041 Score=55.91 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=31.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.|++++|+|+++++|...++.+...|++|+++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999999999999999999999988864
No 218
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.91 E-value=0.0062 Score=54.06 Aligned_cols=82 Identities=17% Similarity=0.240 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHH----HHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~~ 262 (378)
.|+++||+|++|++|...++.+...|++|+.+.+.. ..+..+.+++++.. ..+..+-.+.+.+ .+.....+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999988888999999888531 22223444455533 2222222222222 2222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999984
No 219
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0051 Score=55.31 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCcccHHH----HHHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLEVKN----VKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~ 258 (378)
+++++||+|++|++|...++.+...|++|+++.+. .++. +.+...+.. ..+..+-.+.+. +......
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS----QEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999888899999998853 2222 122233332 222222222222 2222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|.++|.
T Consensus 84 ~~~iD~vi~~ag~ 96 (264)
T PRK07576 84 FGPIDVLVSGAAG 96 (264)
T ss_pred cCCCCEEEECCCC
Confidence 3359999998873
No 220
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.90 E-value=0.0062 Score=54.64 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCc-EEEccCccc---HHH-HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQLE---VKN-VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~ 261 (378)
.++++||+|+++++|...++.+...|++|+++.+ ++++.+.+. +++.. ..+..+-.+ .+. +.......+.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLER----SAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999998889999998875 344444333 34432 222222211 211 2222223345
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 81 id~li~~ag~ 90 (263)
T PRK06200 81 LDCFVGNAGI 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999983
No 221
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.017 Score=50.96 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=62.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~ 261 (378)
++.+++|+|++|++|...++.+...|++++.+.+..... .+..+.+...+.. ..+..+-.+.+.+ .+.....++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999988877532100 1111223334432 2222222222222 222222235
Q ss_pred CcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecC
Q 017064 262 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 262 ~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~ 293 (378)
+|++|.++|... ++.++..++.+|+++.++..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 999999998421 01234455567899998743
No 222
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0048 Score=55.12 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=50.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-EEEccCcccHHH----HHHHhc
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKN----VKGLLA 257 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~-~vi~~~~~~~~~----i~~~~~ 257 (378)
-.+.+++|+|+++++|...+..+...|++|+++.+. +++.+.+ ...+.. +.+..+-.+.+. +.....
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999888999999988853 3332222 222332 122222222222 222222
Q ss_pred CCCCCcEEEeCCCC
Q 017064 258 NLPEPALGFNCVGG 271 (378)
Q Consensus 258 ~~g~~Dvvid~~g~ 271 (378)
..+.+|++|.++|.
T Consensus 79 ~~g~~d~vi~~ag~ 92 (258)
T PRK07890 79 RFGRVDALVNNAFR 92 (258)
T ss_pred HcCCccEEEECCcc
Confidence 22359999999974
No 223
>PRK06720 hypothetical protein; Provisional
Probab=96.89 E-value=0.0092 Score=49.79 Aligned_cols=84 Identities=14% Similarity=0.186 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.+..++|.|+++++|...+..+...|++|+++.+.....++..+.+...|... .+..+-.+.+++. +.....|++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999998888889999888753211111112233334332 2323322222222 222333469
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999999883
No 224
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0053 Score=54.54 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.+.+++|+|++|++|...++.+...|++|+++.+.....++-.+.+++.+.. ..+..+-.+.+.+. +.....+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999888888999999886421111111222222322 22322222222222 122122359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 225
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.88 E-value=0.0016 Score=58.72 Aligned_cols=102 Identities=24% Similarity=0.286 Sum_probs=61.7
Q ss_pred HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccH
Q 017064 176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEV 249 (378)
Q Consensus 176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~ 249 (378)
-+..+.+.+++++|++||-.|+ |-|..+..+|+..|++|++++ .++++.+.+ ++.|... .+... +
T Consensus 50 k~~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~git----lS~~Q~~~a~~~~~~~gl~~~v~v~~~--D- 120 (273)
T PF02353_consen 50 KLDLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGIT----LSEEQAEYARERIREAGLEDRVEVRLQ--D- 120 (273)
T ss_dssp HHHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEE----S-HHHHHHHHHHHHCSTSSSTEEEEES----
T ss_pred HHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEEe--e-
Confidence 3445566789999999999997 488999999999999999999 567766655 3566321 11111 1
Q ss_pred HHHHHHhcCCCCCcEEEe-----CCCCcc----HHHHHHhcccCCEEEEEe
Q 017064 250 KNVKGLLANLPEPALGFN-----CVGGNS----ASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 250 ~~i~~~~~~~g~~Dvvid-----~~g~~~----~~~~~~~l~~~G~~v~~g 291 (378)
.+.+.. .+|.|+. .+|... ++.+.+.|+|||+++.-.
T Consensus 121 --~~~~~~---~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 121 --YRDLPG---KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp --GGG------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred --ccccCC---CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 112222 3998864 444322 477889999999987544
No 226
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.88 E-value=0.0056 Score=54.66 Aligned_cols=84 Identities=21% Similarity=0.228 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.++++||+|++|++|...++.+...|++|+++.+.....++..+.+++.|... .+..+-.+.+.+. ......+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999888889999888753211111122233334322 2222222222222 222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999985
No 227
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.87 E-value=0.012 Score=52.17 Aligned_cols=82 Identities=20% Similarity=0.125 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH---HHHHHhCCCcEEE-ccCcccHHH----HHHHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA---KEKLKGLGADEVF-TESQLEVKN----VKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~---~~~~~~~ga~~vi-~~~~~~~~~----i~~~~~~~ 259 (378)
+++++||+|++|++|...++.+...|++|++..+.. ...+ .+.++..+..... ..+-.+.+. +.+.....
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN--SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCC--hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 367899999999999999999999999988865421 2222 2223344544332 222222222 22222222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
+++|++|+++|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 228
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.87 E-value=0.0072 Score=54.06 Aligned_cols=83 Identities=17% Similarity=0.180 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
.++++||+|+++++|...++.+...|++|+++.+.. ..++..+...+.+... .+..+-.+.+. +.+.....|.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999988999999888641 1122223333444332 23222222222 22222223359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999984
No 229
>PRK06484 short chain dehydrogenase; Validated
Probab=96.86 E-value=0.013 Score=58.25 Aligned_cols=103 Identities=21% Similarity=0.304 Sum_probs=65.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-F--TESQL-EVKN-VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~ 261 (378)
.|+++||+|+++++|...++.+...|++|+++.+ ++++.+.+ .+++.... + |..+. ..+. +.+.....|.
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR----DAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999988889999999885 34444433 33554322 2 22221 1222 2222223345
Q ss_pred CcEEEeCCCCc----c-----------------------HHHHHHhcccCCEEEEEecCC
Q 017064 262 PALGFNCVGGN----S-----------------------ASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 262 ~Dvvid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~ 294 (378)
+|++|+++|.. . .+.++..++.+|+++.++...
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99999999842 0 022345556679999998543
No 230
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0045 Score=55.00 Aligned_cols=80 Identities=20% Similarity=0.152 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHh--CCCc-EEEccCcccHHHHH----HHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKG--LGAD-EVFTESQLEVKNVK----GLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~--~ga~-~vi~~~~~~~~~i~----~~~~~~ 259 (378)
.+.+++|+|++|++|...++.+...|++|+.+.+. .++.. ...+ .+.. ..+..+-.+.+.+. +.....
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD----AEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999998887889999998864 22222 2222 2322 22322222222222 222222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
+++|++|.++|.
T Consensus 80 ~~id~vi~~ag~ 91 (252)
T PRK06138 80 GRLDVLVNNAGF 91 (252)
T ss_pred CCCCEEEECCCC
Confidence 359999999984
No 231
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.004 Score=57.35 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=31.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.|++|+|+|++|++|...++.+...|++|+++.|.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999999998888889999988863
No 232
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.85 E-value=0.0097 Score=54.30 Aligned_cols=144 Identities=13% Similarity=0.182 Sum_probs=78.6
Q ss_pred CCCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHHH--HHHHHHHhccCCCCEEEEeCCCchHHH
Q 017064 126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA--LRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (378)
Q Consensus 126 ~~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta--~~~l~~~~~~~~g~~VlV~g~~g~~G~ 203 (378)
.+.+|++....+. +.++-..+......+..++.+-.+ ....|. ...+.. ...++++||-.|+ |. |.
T Consensus 105 p~~~g~~~~i~p~----w~~~~~~~~~~~i~ldpg~aFgtG----~h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~ 172 (288)
T TIGR00406 105 PVQFGKRFWICPS----WRDVPSDEDALIIMLDPGLAFGTG----THPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GI 172 (288)
T ss_pred CEEEcCeEEEECC----CcCCCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hH
Confidence 3566887666543 333322234456666666544332 122232 223332 2457899999998 54 88
Q ss_pred HHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHh----CCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCcc----H
Q 017064 204 CIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----A 274 (378)
Q Consensus 204 ~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~----~ 274 (378)
.++.+++ .|+ +|+++. .++...+.+++ .+....+.....+ ......+ +||+|+.+..... +
T Consensus 173 lai~aa~-~g~~~V~avD----id~~al~~a~~n~~~n~~~~~~~~~~~~---~~~~~~~--~fDlVvan~~~~~l~~ll 242 (288)
T TIGR00406 173 LSIAALK-LGAAKVVGID----IDPLAVESARKNAELNQVSDRLQVKLIY---LEQPIEG--KADVIVANILAEVIKELY 242 (288)
T ss_pred HHHHHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCcceEEEecc---cccccCC--CceEEEEecCHHHHHHHH
Confidence 8877766 466 666665 35555555443 2322111000000 1111122 5999997665432 3
Q ss_pred HHHHHhcccCCEEEEEe
Q 017064 275 SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 275 ~~~~~~l~~~G~~v~~g 291 (378)
....+.|++||.++..|
T Consensus 243 ~~~~~~LkpgG~li~sg 259 (288)
T TIGR00406 243 PQFSRLVKPGGWLILSG 259 (288)
T ss_pred HHHHHHcCCCcEEEEEe
Confidence 56789999999998876
No 233
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0046 Score=55.52 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC--CC-cEEEccCcccHH---HHHHHhcCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GA-DEVFTESQLEVK---NVKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~--ga-~~vi~~~~~~~~---~i~~~~~~~g 260 (378)
++.++||+|++|++|...+..+...|++|+++.+. +++.+.+ .++ +. ...+..+-.+.+ .+.+.....+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN----AEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 46789999999999999999888899999998853 3333322 222 21 122222222222 2222111123
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
.+|++|.++|.
T Consensus 80 ~id~lv~~ag~ 90 (263)
T PRK09072 80 GINVLINNAGV 90 (263)
T ss_pred CCCEEEECCCC
Confidence 59999999985
No 234
>PRK08264 short chain dehydrogenase; Validated
Probab=96.85 E-value=0.0081 Score=52.92 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
.+.+++|+|++|++|...++.+...|+ +|+++.+. .++.+. .+.. .++..+-.+.+.+.+.....+.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~----~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecC----hhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 467999999999999999999998999 88888753 333221 2222 22222222333444444333458999
Q ss_pred EeCCCC
Q 017064 266 FNCVGG 271 (378)
Q Consensus 266 id~~g~ 271 (378)
|.++|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999986
No 235
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0059 Score=53.66 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCC-C
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLP-E 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g-~ 261 (378)
.|++++|.|+++++|...+..+...|++|+++.+.....++..+.+++.|.+. .+..+..+.+.+ .+.....| .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888899999888754211111122333445432 222222222222 22222223 5
Q ss_pred CcEEEeCCC
Q 017064 262 PALGFNCVG 270 (378)
Q Consensus 262 ~Dvvid~~g 270 (378)
+|++|+++|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999997
No 236
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.84 E-value=0.0073 Score=53.21 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=50.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHH-HHHHhcCCCCCcE
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKN-VKGLLANLPEPAL 264 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g~~Dv 264 (378)
++++||+|+++++|...++.+...|++|+++.+.. ++..+.++..|+. .+..+-.+ .+. +.+.....+++|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH---YPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence 46899999999999999998888999999988642 2223344455543 23222222 222 2222222335999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
+|+++|.
T Consensus 78 lv~~ag~ 84 (236)
T PRK06483 78 IIHNASD 84 (236)
T ss_pred EEECCcc
Confidence 9999984
No 237
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.83 E-value=0.0051 Score=55.24 Aligned_cols=83 Identities=12% Similarity=0.132 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ccCcc-cHHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g 260 (378)
.|++++|+|+++ ++|.+.++.+...|++|+.+.+.. ..++..+.+ .+.|....+ |-.+. .++. +.+.....|
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 568999999986 899999888888899998876431 112223323 334544333 22221 2222 222223334
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
++|++|+++|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 69999999873
No 238
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.82 E-value=0.0081 Score=53.91 Aligned_cols=80 Identities=18% Similarity=0.187 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEE--ccCcc-cHH-HHHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EVK-NVKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi--~~~~~-~~~-~i~~~~~~~g~ 261 (378)
++++++|+|++|++|...++.+...|++|+++.+ +.++.+.+.+ .+.. ..+ |..+. ... .+.+.....++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK----SAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999998889999998875 3444444433 3322 122 22221 111 12232222345
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 80 id~li~~Ag~ 89 (262)
T TIGR03325 80 IDCLIPNAGI 89 (262)
T ss_pred CCEEEECCCC
Confidence 9999999873
No 239
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.82 E-value=0.006 Score=55.23 Aligned_cols=83 Identities=14% Similarity=0.265 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
.+++++|+|++|++|...++.+...|++|+++.+..+..++..+.+++.|.. ..+..+-.+.+. +.+.....+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999889999998885321111112222333432 222222222222 22222223459
Q ss_pred cEEEeCCC
Q 017064 263 ALGFNCVG 270 (378)
Q Consensus 263 Dvvid~~g 270 (378)
|++|.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999988
No 240
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.0067 Score=54.50 Aligned_cols=83 Identities=16% Similarity=0.137 Sum_probs=50.1
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE---VKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~---~~~-i~~~~~~~g 260 (378)
.++++||+|+ ++++|.+.++.+...|++|+++.+.+ ...++.+.+ ++.|....+..+-.+ ++. +.+.....|
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4689999996 57999999988888999998875421 122333323 334433333222222 222 222223334
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 69999999974
No 241
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.0079 Score=54.42 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=52.5
Q ss_pred cCCCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCccc---HHH-HHHHhcC
Q 017064 186 LNSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE---VKN-VKGLLAN 258 (378)
Q Consensus 186 ~~~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~---~~~-i~~~~~~ 258 (378)
+-.++++||+|++ +++|...++.+...|++|+.+.+.+ ...++.+.+ +++|....+..+-.+ .+. +.+....
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 4457899999996 7999999988888999998776421 122333333 345643333323222 222 2222233
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.|++|++|+++|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 3469999999973
No 242
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.81 E-value=0.019 Score=51.45 Aligned_cols=107 Identities=11% Similarity=0.088 Sum_probs=62.9
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEecCCC--CcHHHHHHHHhCCC-cEEEccCcccHHH----HHHHhcC
Q 017064 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRA--GSDEAKEKLKGLGA-DEVFTESQLEVKN----VKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~~~~~--~~~~~~~~~~~~ga-~~vi~~~~~~~~~----i~~~~~~ 258 (378)
.|++++|+|++ +++|...++.+...|++|+++.+..+ ..++..+.+.+.+. ...+..+-.+.+. +.+....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46899999985 79999999888889999987754321 12223333333222 2222222222222 2222222
Q ss_pred CCCCcEEEeCCCCc-------cH-----------------------HHHHHhcccCCEEEEEecCC
Q 017064 259 LPEPALGFNCVGGN-------SA-----------------------SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 259 ~g~~Dvvid~~g~~-------~~-----------------------~~~~~~l~~~G~~v~~g~~~ 294 (378)
.|++|++|+++|.. .+ +..+..++.+|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 34599999999831 11 22455666789999887543
No 243
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.006 Score=54.62 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.+++++|+|+++++|...++.+...|++|+++.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999999888999999988853
No 244
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0065 Score=53.15 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=48.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc---HHHHHHHhcCCCCCcEEE
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE---VKNVKGLLANLPEPALGF 266 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~---~~~i~~~~~~~g~~Dvvi 266 (378)
++++|+|++|++|...++.+...|++|+++.+.. ++.+.+++++....+..+-.+ ...+.+...+. ++|++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGP----QQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQ-RFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC----cchHHHHhccccceEEcCCCCHHHHHHHHHHhhcC-CCCEEE
Confidence 4799999999999999988888899999988642 222233333322222222122 23333333322 499999
Q ss_pred eCCCC
Q 017064 267 NCVGG 271 (378)
Q Consensus 267 d~~g~ 271 (378)
.++|.
T Consensus 77 ~~ag~ 81 (225)
T PRK08177 77 VNAGI 81 (225)
T ss_pred EcCcc
Confidence 99874
No 245
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.78 E-value=0.02 Score=53.05 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=62.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+|+|+||+|-+|...+..+...|.+|++++|. .++...+...|.+.+. .+-.+.+.+.+...+ +|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~----~~~~~~l~~~~v~~v~-~Dl~d~~~l~~al~g---~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRN----LRKASFLKEWGAELVY-GDLSLPETLPPSFKG---VTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC----hHHhhhHhhcCCEEEE-CCCCCHHHHHHHHCC---CCEEEECCC
Confidence 69999999999999999888889999999963 3343444445654432 222233455555554 999999876
Q ss_pred Ccc-----H--------HHHHHhcccCC--EEEEEecC
Q 017064 271 GNS-----A--------SKVLKFLSQGG--TMVTYGGM 293 (378)
Q Consensus 271 ~~~-----~--------~~~~~~l~~~G--~~v~~g~~ 293 (378)
... + ...++.++..| ++|+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 321 1 23444444444 88888753
No 246
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.77 E-value=0.0095 Score=53.18 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHH-HHHHhcCCCCCcE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL 264 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~-i~~~~~~~g~~Dv 264 (378)
.+++++|+|+++++|...++.+...|++|+++.+. .++..+.++..+...+ .|-.+. .++. +.......+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS---AENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999888899999887643 3344444444443222 122221 1222 2222222335999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
+|.|+|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999975
No 247
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.77 E-value=0.018 Score=51.91 Aligned_cols=96 Identities=19% Similarity=0.305 Sum_probs=70.3
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++...+..+....---.|++|+|.|.+..+|.-++.++...|++|+++-+. +
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~---t-------------------- 192 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR---S-------------------- 192 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---c--------------------
Confidence 35677777777777664323568999999997779999999999999999877621 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.+.+. ..|+||.++|.+.+ .. ++++++-.++.+|..
T Consensus 193 ---~~l~~~~~---~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 193 ---KDMASYLK---DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred ---hhHHHHHh---hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 01222333 39999999998754 32 568999899999854
No 248
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.77 E-value=0.012 Score=54.27 Aligned_cols=99 Identities=17% Similarity=0.230 Sum_probs=64.5
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHH----HHhCCCcEEEccCcccHHHHHHH
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEK----LKGLGADEVFTESQLEVKNVKGL 255 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~----~~~~ga~~vi~~~~~~~~~i~~~ 255 (378)
+...++++++||..|+ | .|..++.+++..+. +|+++. .+++..+. ++..|.+.+..... +.. +.
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVD----is~~~l~~Ar~~l~~~g~~nV~~i~g-D~~---~~ 143 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVRRLGIENVIFVCG-DGY---YG 143 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCcEEEEeC-Chh---hc
Confidence 3467889999999998 4 69999999998764 566665 35554433 34567664432221 111 11
Q ss_pred hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEE
Q 017064 256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTY 290 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~ 290 (378)
....+.+|+|+.+.+.... ...++.|+++|+++..
T Consensus 144 ~~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 144 VPEFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ccccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1111249999998876444 5678999999998764
No 249
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.008 Score=53.70 Aligned_cols=83 Identities=17% Similarity=0.158 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~~ 262 (378)
.|.++||+|++|++|...++.+...|++|+++.+... ..+..+.++..+... .+..+-.+.+.+ .......+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAP-DDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChh-hHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999888888999998886432 111122233344332 222222222222 2222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
No 250
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0093 Score=52.89 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=51.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEE-EccCccc---HHHH-HHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV-FTESQLE---VKNV-KGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~v-i~~~~~~---~~~i-~~~~~~~g~ 261 (378)
++++++|+|++|++|...++.+...|++|+++.+ ++++. +..+++|.... +..+-.+ ...+ .......++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGR----DPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999988875 33333 23345554422 2222112 2221 122222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 81 id~vi~~ag~ 90 (249)
T PRK06500 81 LDAVFINAGV 90 (249)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 251
>PRK08017 oxidoreductase; Provisional
Probab=96.76 E-value=0.0084 Score=53.43 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=52.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCcc-cH----HHHHHHhcCCCCCc
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQL-EV----KNVKGLLANLPEPA 263 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~-~~----~~i~~~~~~~g~~D 263 (378)
++++|+|++|++|...++.+...|++|+++.+ +.++.+.+++.++..+. |..+. .. +.+....++ .+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~--~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACR----KPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDN--RLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCC--CCe
Confidence 57999999999999999999999999988874 55666666666765432 32222 11 222222222 489
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
.++.++|.
T Consensus 77 ~ii~~ag~ 84 (256)
T PRK08017 77 GLFNNAGF 84 (256)
T ss_pred EEEECCCC
Confidence 99999874
No 252
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.75 E-value=0.008 Score=53.78 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-EEEccCcccHHHH----HHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKNV----KGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~ga~-~vi~~~~~~~~~i----~~~~~~ 258 (378)
++.++||+|++|++|...++.+...|++|+.+.+. .++.+.+ +..+.. ..+..+-.+.+.+ .++...
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK----AEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999888899999888853 3333222 233332 2232222222222 222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+.+|.+|.++|.
T Consensus 87 ~~~id~vi~~ag~ 99 (259)
T PRK08213 87 FGHVDILVNNAGA 99 (259)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999884
No 253
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.029 Score=49.86 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=29.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~ 220 (378)
.++++||+|+++++|...++.+...|++|+++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~ 35 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY 35 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 468999999999999999999999999988765
No 254
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0091 Score=52.75 Aligned_cols=81 Identities=21% Similarity=0.253 Sum_probs=50.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCcccHHH----HHHHhc
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKN----VKGLLA 257 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~~~~----i~~~~~ 257 (378)
..+++++|+|++|++|...+..+...|++|+++.+. +++.+. +++.+... .+..+-.+.+. +.....
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARS----QDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE 79 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 346789999999999999999998899999998863 333222 22333222 22222222222 222222
Q ss_pred CCCCCcEEEeCCCC
Q 017064 258 NLPEPALGFNCVGG 271 (378)
Q Consensus 258 ~~g~~Dvvid~~g~ 271 (378)
..+++|++|.++|.
T Consensus 80 ~~~~id~lv~~ag~ 93 (241)
T PRK07454 80 QFGCPDVLINNAGM 93 (241)
T ss_pred HcCCCCEEEECCCc
Confidence 23459999999984
No 255
>PRK07985 oxidoreductase; Provisional
Probab=96.75 E-value=0.021 Score=52.28 Aligned_cols=107 Identities=12% Similarity=0.139 Sum_probs=62.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC-CcHHH-HHHHHhCCCcE-EE--ccCcc-cHHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEA-KEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~-~~~~~-~~~~~~~ga~~-vi--~~~~~-~~~~-i~~~~~~~g 260 (378)
.++++||+|+++++|...++.+...|++|+++.+... ...++ .+.+++.|... .+ |-.+. .... +.+.....|
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5679999999999999999999889999987654311 01111 12223344332 22 22221 1211 222333334
Q ss_pred CCcEEEeCCCCcc----H-----------------------HHHHHhcccCCEEEEEecCC
Q 017064 261 EPALGFNCVGGNS----A-----------------------SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 261 ~~Dvvid~~g~~~----~-----------------------~~~~~~l~~~G~~v~~g~~~ 294 (378)
++|+++.++|... + +.++..++.+|++|.++...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 5999999987410 0 22344556789999987543
No 256
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.74 E-value=0.013 Score=55.14 Aligned_cols=82 Identities=17% Similarity=0.203 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
.|.+|||+|++|.+|...++.+...|.+|+++.+...........+ ..+.. ..+..+-.+.+.+.+.....+ +|+||
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~vi 80 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELL-NLAKKIEDHFGDIRDAAKLRKAIAEFK-PEIVF 80 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHH-hhcCCceEEEccCCCHHHHHHHHhhcC-CCEEE
Confidence 4689999999999999999999989999998876532222111111 11111 122222233445555554433 89999
Q ss_pred eCCCC
Q 017064 267 NCVGG 271 (378)
Q Consensus 267 d~~g~ 271 (378)
++++.
T Consensus 81 h~A~~ 85 (349)
T TIGR02622 81 HLAAQ 85 (349)
T ss_pred ECCcc
Confidence 99984
No 257
>PRK08589 short chain dehydrogenase; Validated
Probab=96.74 E-value=0.0093 Score=53.89 Aligned_cols=83 Identities=19% Similarity=0.247 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ccCcc-cHHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~~ 262 (378)
.++++||+|+++++|...++.+...|++|+++.+. +..++..+.+++.+.. ..+ |-.+. .+.. +.......|++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999998888889999998853 1111112233333432 222 22221 1221 22222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999974
No 258
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.73 E-value=0.0072 Score=53.59 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHHHHH----HhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKG----LLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~i~~----~~~~~g~~ 262 (378)
.+.++||+|++|++|...+..+...|++|+++.|......+..+.+.+.+.. .++..+-.+.+.+.+ .....+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999888888999999986421112222233333432 222222222222222 22222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999875
No 259
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.73 E-value=0.014 Score=54.91 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=67.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCC--CcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLG--ADEVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g--a~~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
.+|||.|+ |++|+.+++.+.+.| .+|+++.| +.++.+.+.... --..+..+..+.+.+.++..+ +|+||
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR----s~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~---~d~VI 73 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR----SKEKCARIAELIGGKVEALQVDAADVDALVALIKD---FDLVI 73 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeC----CHHHHHHHHhhccccceeEEecccChHHHHHHHhc---CCEEE
Confidence 47999999 999999999988888 78888885 566666665432 222222333445567777775 79999
Q ss_pred eCCCCccHHHHH-HhcccCCEEEEEe
Q 017064 267 NCVGGNSASKVL-KFLSQGGTMVTYG 291 (378)
Q Consensus 267 d~~g~~~~~~~~-~~l~~~G~~v~~g 291 (378)
+|........++ .|++.|=.++...
T Consensus 74 n~~p~~~~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 74 NAAPPFVDLTILKACIKTGVDYVDTS 99 (389)
T ss_pred EeCCchhhHHHHHHHHHhCCCEEEcc
Confidence 999987665555 6777777777765
No 260
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=53.56 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEE--ccCcc-cHHH-HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EVKN-VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~ 261 (378)
.++++||+|++|++|...++.+...|++|+++.+ +.++.+.+.+ .+.. ..+ |..+. .... +.......+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVR----SEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC----CHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999988888999999885 4444444433 2221 122 22221 1111 2222222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 79 ~d~vv~~ag~ 88 (277)
T PRK06180 79 IDVLVNNAGY 88 (277)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 261
>PLN02253 xanthoxin dehydrogenase
Probab=96.71 E-value=0.0079 Score=54.51 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCC--c-EEEccCcccHHHH----HHHhcCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGA--D-EVFTESQLEVKNV----KGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga--~-~vi~~~~~~~~~i----~~~~~~~ 259 (378)
.++++||+|++|++|...++.+...|++|+++.+. +++. +...+++. . ..+..+-.+.+.+ .......
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ----DDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 36899999999999999998888889999988753 2222 22233321 1 2222222222222 2222222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
|++|++|+++|.
T Consensus 93 g~id~li~~Ag~ 104 (280)
T PLN02253 93 GTLDIMVNNAGL 104 (280)
T ss_pred CCCCEEEECCCc
Confidence 359999999974
No 262
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.01 Score=52.96 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EEccCcccHHHHHH----HhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQLEVKNVKG----LLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~i~~----~~~~~g~ 261 (378)
.++++||+|++|++|...++.+...|++|+.+.+. .+..+...++.... .+..+-.+.+.+.+ .....++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999998888899999988853 33333333322111 22222222222222 2222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 90 ~d~vi~~ag~ 99 (255)
T PRK06841 90 IDILVNSAGV 99 (255)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 263
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.71 E-value=0.011 Score=52.85 Aligned_cols=82 Identities=18% Similarity=0.178 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~~ 262 (378)
.|+++||+|+++++|...++.+...|++|+.+.+. ..++..+.+++.+... .+..+-.+ ... +.+.....+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV--EPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc--chHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999998899999876532 1233334444455332 22222222 222 22222223359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999984
No 264
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0079 Score=53.53 Aligned_cols=84 Identities=17% Similarity=0.244 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCccc---HHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLE---VKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~~ 262 (378)
.+.++||+|+++++|...++.+...|++|+.+.+.....++..+.+.+.+.. +.+..+-.+ .+. +.+.....+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999889999998885321111111222233432 222222222 221 22222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999983
No 265
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.011 Score=54.57 Aligned_cols=35 Identities=23% Similarity=0.147 Sum_probs=31.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.|++++|+|+++++|...++.+...|++|+++.+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999998899999998864
No 266
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.69 E-value=0.0077 Score=54.09 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=49.8
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLE---VKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~---~~~-i~~~~~~~g 260 (378)
.++++||+|+ ++++|.+.++.+...|++|+.+.+.. ...++.+ ...+++....+..+-.+ .+. +.......|
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4689999996 57999999988888999998764321 1233333 23345543333222222 222 222222234
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
++|++|+++|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 69999999974
No 267
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.69 E-value=0.01 Score=53.51 Aligned_cols=85 Identities=21% Similarity=0.295 Sum_probs=52.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc---E---EEccCc-ccHHH-HHHHhcC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---E---VFTESQ-LEVKN-VKGLLAN 258 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~---~---vi~~~~-~~~~~-i~~~~~~ 258 (378)
-.|+.+||+|++.++|.+.+..+...|++|+++.|..+..++....+...+.. . ..|... ++.+. +......
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999986421111222222333332 1 122221 22222 2222222
Q ss_pred -CCCCcEEEeCCCC
Q 017064 259 -LPEPALGFNCVGG 271 (378)
Q Consensus 259 -~g~~Dvvid~~g~ 271 (378)
.|++|+.++++|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 3469999999985
No 268
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.68 E-value=0.0088 Score=53.34 Aligned_cols=84 Identities=15% Similarity=0.115 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~~ 262 (378)
.++++||+|+++++|...++.+...|++|+.+.+......+..+.++..+... .+..+-.+ .+. +.......+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999888899999988753211111112223333322 22222222 222 22222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 269
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.68 E-value=0.0099 Score=52.99 Aligned_cols=84 Identities=15% Similarity=0.132 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.+.++||+|++|++|...++.+...|.+|+++.+.....++....++..+... .+..+-.+.+.+. ......+.+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45799999999999999999888889999999864211111112223334332 2322222222222 222222349
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999974
No 270
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0073 Score=54.02 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=49.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC--c-EEEccCcccHHHH----HHHhcCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVFTESQLEVKNV----KGLLANLP 260 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga--~-~vi~~~~~~~~~i----~~~~~~~g 260 (378)
+.++||+|++|++|...++.+...|++|+++.+ +.++.+.+ .++.. + ..+..+-.+.+.+ .+.....|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVAR----RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999888888999998875 34443322 22221 1 1222222222222 22333334
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
.+|++|+++|.
T Consensus 78 ~id~lv~~ag~ 88 (257)
T PRK07024 78 LPDVVIANAGI 88 (257)
T ss_pred CCCEEEECCCc
Confidence 58999999884
No 271
>PRK08643 acetoin reductase; Validated
Probab=96.66 E-value=0.0099 Score=53.04 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=49.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccH---HH-HHHHhcCCCCCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEV---KN-VKGLLANLPEPA 263 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~---~~-i~~~~~~~g~~D 263 (378)
++++||+|++|++|...++.+...|++|+++.+..+..++....+...+... .+..+-.+. .+ +.+.....+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999998899999988854211111112223333322 222222221 22 222222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999974
No 272
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.65 E-value=0.01 Score=52.98 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHH----HHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNV----KGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i----~~~~~~ 258 (378)
.+++|||+|+++++|...+..+...|++++++.+. .++.+ .++..+.+. ++..+-.+.+.+ ......
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999888899999988753 33322 223334332 222222222222 222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|.++|.
T Consensus 86 ~~~~d~li~~ag~ 98 (255)
T PRK06113 86 LGKVDILVNNAGG 98 (255)
T ss_pred cCCCCEEEECCCC
Confidence 3459999999984
No 273
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=52.83 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=50.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHH----HHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVK----GLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~----~~~~~~g~~ 262 (378)
.+.+++|+|+++++|...+..+...|++|+++.+..+..++..+.++..|... .+..+-.+.+.+. +.....+.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 56899999999999999888888889999888753211111222333445432 2222222222222 222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999984
No 274
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.64 E-value=0.0097 Score=55.23 Aligned_cols=79 Identities=19% Similarity=0.249 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCCcE----EEccCc---ccHHHHHHH
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGADE----VFTESQ---LEVKNVKGL 255 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~ga~~----vi~~~~---~~~~~i~~~ 255 (378)
.|++++|+||++++|...++.+...|++|+.+.|. +++.+.+ ++ .+... ..|-.+ ...+.+.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN----PDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence 48999999999999999998888889999998863 4443322 22 22111 123322 122345554
Q ss_pred hcCCCCCcEEEeCCCC
Q 017064 256 LANLPEPALGFNCVGG 271 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~ 271 (378)
.++.. +|++|+++|.
T Consensus 128 ~~~~d-idilVnnAG~ 142 (320)
T PLN02780 128 IEGLD-VGVLINNVGV 142 (320)
T ss_pred hcCCC-ccEEEEecCc
Confidence 44432 6799999874
No 275
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.63 E-value=0.02 Score=47.61 Aligned_cols=96 Identities=19% Similarity=0.223 Sum_probs=63.5
Q ss_pred hhhccccHHHHHHHHHHHhccCCCCEEEEeCCCch-HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc
Q 017064 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI-VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244 (378)
Q Consensus 166 aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~-~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~ 244 (378)
....|+...++...+.....--.|.+|+|.|+ |. +|..++..++..|++|+++.+. .
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~---~------------------ 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSK---T------------------ 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECC---c------------------
Confidence 34556555556655555444457899999999 65 6998999999999987766632 1
Q ss_pred CcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064 245 SQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 245 ~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~ 292 (378)
+++.+... .+|+||.+++.+.+ --.+.++++-.++.++.
T Consensus 79 -----~~l~~~l~---~aDiVIsat~~~~i-i~~~~~~~~~viIDla~ 117 (168)
T cd01080 79 -----KNLKEHTK---QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGI 117 (168)
T ss_pred -----hhHHHHHh---hCCEEEEcCCCCce-ecHHHccCCeEEEEccC
Confidence 12222333 39999999998653 12235677767777764
No 276
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.015 Score=52.93 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=31.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
-.++++||+|+++++|...++.+...|++|+++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence 467899999999999999998888899999887643
No 277
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.62 E-value=0.0084 Score=53.23 Aligned_cols=81 Identities=17% Similarity=0.219 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCcccHHHHH----HHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKNVK----GLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~~~~i~----~~~~~ 258 (378)
++.++||+|++|++|...+..+...|++|+++... +.++. +.++..+.... +..+-.+.+.+. +....
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR---SRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999998899998775321 22222 23334454322 222222222222 22222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+.+|++|.++|.
T Consensus 80 ~~~id~vi~~ag~ 92 (250)
T PRK08063 80 FGRLDVFVNNAAS 92 (250)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999984
No 278
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.018 Score=51.43 Aligned_cols=84 Identities=20% Similarity=0.179 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EEccCccc---HHH-HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~-vi~~~~~~---~~~-i~~~~~~~g~ 261 (378)
.++++||+|+++++|...++.+...|++|+++.+..... ++..+.++..+... .+..+-.+ ..+ +.+.....+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999887642111 11122333444332 22222212 222 2222222345
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 279
>PRK09242 tropinone reductase; Provisional
Probab=96.58 E-value=0.011 Score=52.70 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.|++++|+|+++++|...+..+...|++|+++.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 47899999999999999999999999999988863
No 280
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.57 E-value=0.016 Score=55.40 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC-cEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA-DEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
.|++++|+||+|++|...+..+...|++|+++.+. +++.+ .....+. ...+..+-.+.+.+.+..+ ++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~----~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~---~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSN----SDKITLEINGEDLPVKTLHWQVGQEAALAELLE---KVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC---CCCEE
Confidence 46899999999999999998888889999988753 33322 2221111 1222222233445555544 49999
Q ss_pred EeCCCC
Q 017064 266 FNCVGG 271 (378)
Q Consensus 266 id~~g~ 271 (378)
|+++|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 999874
No 281
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.57 E-value=0.057 Score=46.42 Aligned_cols=92 Identities=12% Similarity=0.111 Sum_probs=57.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|.+|||.|+ |.+|...+..+...|++|+++... ..++-.+.+.. |.-. +.........+ . ++|+||-
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~--~~~~l~~l~~~-~~i~-~~~~~~~~~~l----~---~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE--LTENLVKLVEE-GKIR-WKQKEFEPSDI----V---DAFLVIA 76 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC--CCHHHHHHHhC-CCEE-EEecCCChhhc----C---CceEEEE
Confidence 4689999999 999999888888889998877632 22332333333 2111 11111111111 1 3999999
Q ss_pred CCCCccHHHHHHhcccCCEEEEEe
Q 017064 268 CVGGNSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~~~~~~~~l~~~G~~v~~g 291 (378)
+++.+..+..+...+..+.++.+.
T Consensus 77 aT~d~elN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 77 ATNDPRVNEQVKEDLPENALFNVI 100 (202)
T ss_pred cCCCHHHHHHHHHHHHhCCcEEEC
Confidence 999988866655444556666665
No 282
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.57 E-value=0.018 Score=51.86 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCccc---HHH-HHHHhcCCC
Q 017064 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLE---VKN-VKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~---~~~-i~~~~~~~g 260 (378)
.|+++||+|+++ ++|.+.++.+...|++|+.+.+.. ..++..+.+. +.+....+..+-.+ ++. +.......|
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 478999999975 899998888888899988776431 1122233332 23322333222222 222 222223334
Q ss_pred CCcEEEeCCC
Q 017064 261 EPALGFNCVG 270 (378)
Q Consensus 261 ~~Dvvid~~g 270 (378)
.+|++|+++|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6999999998
No 283
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.56 E-value=0.015 Score=51.20 Aligned_cols=84 Identities=14% Similarity=0.215 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ccCcc-cHHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL-EVKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi---~~~~~-~~~~-i~~~~~~~g~~ 262 (378)
++.++||+|++|++|...++.+...|.+|+++.+.....+.....++..+....+ |..+. .... +.......+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999988888999988886421111112233344543322 22221 1111 22222222358
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|.+|.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999975
No 284
>PRK05717 oxidoreductase; Validated
Probab=96.55 E-value=0.019 Score=51.17 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EEccCcccHHH----HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VFTESQLEVKN----VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~ 261 (378)
.|++++|+|++|++|...+..+...|++|+++.+ +.++. +..+.++... .+..+-.+.+. +.+.....|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL----DRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3689999999999999999888888999988764 33332 2333444322 22222112111 2333333345
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 85 id~li~~ag~ 94 (255)
T PRK05717 85 LDALVCNAAI 94 (255)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 285
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.55 E-value=0.0096 Score=53.26 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-E--ccCcc-cHHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i--~~~~~-~~~~-i~~~~~~~g~~ 262 (378)
.++++||+|++|++|...++.+...|++|+++.+.. ...+..+.+...+.+.. + |..+. .... +.+.....+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999998888999998887531 11122223333444322 2 22221 1111 22222223359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999973
No 286
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.035 Score=49.24 Aligned_cols=104 Identities=15% Similarity=0.215 Sum_probs=62.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH---HHHHhCCCcE-EEccCcccHHH----HHHHhcCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGADE-VFTESQLEVKN----VKGLLANLP 260 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g 260 (378)
+.++||.|++|++|...++.+...|++++.+++.. .++.. ..+++.+... .+..+-.+... +.......+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999988888999988777531 12222 2233444332 22222222222 222222223
Q ss_pred CCcEEEeCCCCcc--------------------------HHHHHHhcccCCEEEEEecCC
Q 017064 261 EPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 261 ~~Dvvid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 294 (378)
.+|++|.++|... .+.++..++..|+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 4999999998310 123455666789999998644
No 287
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.015 Score=51.30 Aligned_cols=84 Identities=15% Similarity=0.224 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
.+.+++|.|++|++|...+..+...|++|+++.+.....++..+.++..+... ++..+-.+.+. +.......+.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999998888899999998864211111112223333322 22222222222 22222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999875
No 288
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.52 E-value=0.014 Score=52.34 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=48.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HH---H-hCCCc-EEEccCcccHHHH----HHHhc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KL---K-GLGAD-EVFTESQLEVKNV----KGLLA 257 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~---~-~~ga~-~vi~~~~~~~~~i----~~~~~ 257 (378)
.++++||+|+++++|...+..+...|++|+.+.+. ++++.+ .. + ..|.. ..+..+-.+.+.+ .+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS---NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999888899999887643 233322 11 1 23432 2232222222222 22222
Q ss_pred CCCCCcEEEeCCC
Q 017064 258 NLPEPALGFNCVG 270 (378)
Q Consensus 258 ~~g~~Dvvid~~g 270 (378)
..+++|++|+++|
T Consensus 84 ~~g~id~lv~nAg 96 (260)
T PRK08416 84 DFDRVDFFISNAI 96 (260)
T ss_pred hcCCccEEEECcc
Confidence 2345999999986
No 289
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.01 Score=52.31 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
++++++|+|++|++|...++.+...|++|+++.|.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 45799999999999999999888899999998864
No 290
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.51 E-value=0.014 Score=52.21 Aligned_cols=34 Identities=12% Similarity=0.068 Sum_probs=30.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
++++||+|++|++|...+..+...|++++.+.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999999999998888889999888753
No 291
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.51 E-value=0.037 Score=50.04 Aligned_cols=147 Identities=16% Similarity=0.231 Sum_probs=84.4
Q ss_pred CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHH--HHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQC 204 (378)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~g~~VlV~g~~g~~G~~ 204 (378)
.+.|++....++ |.+|..-.....+++.+++.| .....+.| +..+|.+. +++|.+||=+|+ +.|.+
T Consensus 109 ~rig~~f~I~Ps----w~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~lcL~~Le~~--~~~g~~vlDvGc--GSGIL 176 (300)
T COG2264 109 VRIGERFVIVPS----WREYPEPSDELNIELDPGLAF----GTGTHPTTSLCLEALEKL--LKKGKTVLDVGC--GSGIL 176 (300)
T ss_pred EEeeeeEEECCC----CccCCCCCCceEEEEcccccc----CCCCChhHHHHHHHHHHh--hcCCCEEEEecC--ChhHH
Confidence 566888777654 555533324667888888744 23444444 34444432 469999999997 56777
Q ss_pred HHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCCccH----HH
Q 017064 205 IIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----SK 276 (378)
Q Consensus 205 av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~----~~ 276 (378)
++..+| +|++.+..+|. .+...+. ++..+............ .....+ +.+|+|+.+.=...+ .+
T Consensus 177 aIAa~k-LGA~~v~g~Di---Dp~AV~aa~eNa~~N~v~~~~~~~~~~~--~~~~~~--~~~DvIVANILA~vl~~La~~ 248 (300)
T COG2264 177 AIAAAK-LGAKKVVGVDI---DPQAVEAARENARLNGVELLVQAKGFLL--LEVPEN--GPFDVIVANILAEVLVELAPD 248 (300)
T ss_pred HHHHHH-cCCceEEEecC---CHHHHHHHHHHHHHcCCchhhhcccccc--hhhccc--CcccEEEehhhHHHHHHHHHH
Confidence 765444 57764444443 3433333 33445442110000010 111111 259999977744332 67
Q ss_pred HHHhcccCCEEEEEecC
Q 017064 277 VLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 277 ~~~~l~~~G~~v~~g~~ 293 (378)
..+.++|+|++++.|-.
T Consensus 249 ~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 249 IKRLLKPGGRLILSGIL 265 (300)
T ss_pred HHHHcCCCceEEEEeeh
Confidence 78999999999998833
No 292
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.015 Score=51.86 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.++++||+|++|++|...++.+...|++|+++.+.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999988899999988853
No 293
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.50 E-value=0.05 Score=48.31 Aligned_cols=77 Identities=23% Similarity=0.252 Sum_probs=48.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcE-EEccCcccHHHH----HHHhcCCCCCcE
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VFTESQLEVKNV----KGLLANLPEPAL 264 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~-vi~~~~~~~~~i----~~~~~~~g~~Dv 264 (378)
+++|.|++|++|...+..+...|++|+++.+ ++++.+.+. .++... .+..+-.+.+.+ .+.....+++|+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGR----RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999999999889999998885 444444332 344332 222222222222 222222235999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
+|.++|.
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9999874
No 294
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.50 E-value=0.018 Score=53.51 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~ 221 (378)
.+++++|+|++|++|...++.+...|++|+++.|
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r 38 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR 38 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 4679999999999999999888888999999885
No 295
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.49 E-value=0.014 Score=48.67 Aligned_cols=100 Identities=19% Similarity=0.167 Sum_probs=66.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEcc------------------CcccHHH
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE------------------SQLEVKN 251 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~------------------~~~~~~~ 251 (378)
-+|+|+|+ |.+|+.|+++++.+|++|++.. ...++.+.....++..+... .......
T Consensus 21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPD----ERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHTT-EEEEEE----SSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred eEEEEECC-CHHHHHHHHHHhHCCCEEEecc----CCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 68999998 9999999999999999999887 46777777777777554331 0111123
Q ss_pred HHHHhcCCCCCcEEEeCCC---C--ccH--HHHHHhcccCCEEEEEecCCCCC
Q 017064 252 VKGLLANLPEPALGFNCVG---G--NSA--SKVLKFLSQGGTMVTYGGMSKKP 297 (378)
Q Consensus 252 i~~~~~~~g~~Dvvid~~g---~--~~~--~~~~~~l~~~G~~v~~g~~~~~~ 297 (378)
+.+.... +|++|.+.- . +.+ ...++.|+++.-++.+....+..
T Consensus 96 f~~~i~~---~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG~ 145 (168)
T PF01262_consen 96 FAEFIAP---ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGGS 145 (168)
T ss_dssp HHHHHHH----SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-S
T ss_pred HHHHHhh---CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCCC
Confidence 4444443 899985332 1 222 77888999999898887444433
No 296
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.47 E-value=0.0061 Score=46.78 Aligned_cols=92 Identities=21% Similarity=0.228 Sum_probs=58.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCCcEEEEecCCCCcHHHHHHHHh----CCC-cEE-EccCcccHHHHHHHhcCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDEAKEKLKG----LGA-DEV-FTESQLEVKNVKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~~~~~~~~~~~~~~~----~ga-~~v-i~~~~~~~~~i~~~~~~~g 260 (378)
||++||-.|+ +.|..++.+++ ..+++++++. .+++..+.+++ .+. +.+ +... + +.......+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~i~~~~~--d---~~~~~~~~~ 69 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVD----ISPEMLEIARERAAEEGLSDRITFVQG--D---AEFDPDFLE 69 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHHHHHTTTTTTEEEEES--C---CHGGTTTSS
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHhcCCCCCeEEEEC--c---cccCcccCC
Confidence 6789999997 66888899998 5788988887 46666666543 121 111 1111 1 111111112
Q ss_pred CCcEEEeCC-CC----cc------HHHHHHhcccCCEEEEE
Q 017064 261 EPALGFNCV-GG----NS------ASKVLKFLSQGGTMVTY 290 (378)
Q Consensus 261 ~~Dvvid~~-g~----~~------~~~~~~~l~~~G~~v~~ 290 (378)
++|+|+... .. +. ++...+.|+|||+++.-
T Consensus 70 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 70 PFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp CEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 499999877 32 12 46788999999998753
No 297
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.47 E-value=0.042 Score=51.59 Aligned_cols=85 Identities=14% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCCEEEEeCCCchHHHH--HHHHHHHcCCcEEEEecCCCCcHH------------HHHHHHhCCCcE-EEccCccc---
Q 017064 187 NSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGSDE------------AKEKLKGLGADE-VFTESQLE--- 248 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~--av~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~~ga~~-vi~~~~~~--- 248 (378)
..|+++||+|+++++|++ .++.+ ..|++++++.......+. -.+.+++.|... .++.+-.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 45555 789998888642111111 123445667543 34333322
Q ss_pred HHH-HHHHhcCCCCCcEEEeCCCCc
Q 017064 249 VKN-VKGLLANLPEPALGFNCVGGN 272 (378)
Q Consensus 249 ~~~-i~~~~~~~g~~Dvvid~~g~~ 272 (378)
.+. +..+....|++|+++++++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 222 222333334699999999975
No 298
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.46 E-value=0.022 Score=52.10 Aligned_cols=80 Identities=20% Similarity=0.363 Sum_probs=56.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-Cc---EEEccCcccHHHHHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-AD---EVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a~---~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
.+..|+|+||+|-+|.+.+..+..+|++|.+++|+.. .+++.+.++++. +. .++..+-.+.....+...| .|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~-~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g---cd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE-DEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG---CD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc-hhhhHHHHHhcccCcccceEEeccccccchHHHHHhC---CC
Confidence 5689999999999999999999999999999999863 344555666654 21 2222222223345555554 99
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
.||.++..
T Consensus 81 gVfH~Asp 88 (327)
T KOG1502|consen 81 GVFHTASP 88 (327)
T ss_pred EEEEeCcc
Confidence 99998874
No 299
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.46 E-value=0.0057 Score=59.64 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=58.3
Q ss_pred HHhccCCCCEEE----EeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCc-ccHHHHHHH
Q 017064 182 DFTTLNSGDSIV----QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQ-LEVKNVKGL 255 (378)
Q Consensus 182 ~~~~~~~g~~Vl----V~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~-~~~~~i~~~ 255 (378)
.+.++++|+.+| |+|++|++|.+++|++++.|++|+++.+ ...+....+..+.+ .+++... .+.+++...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANND----GGLTWAAGWGDRFGALVFDATGITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCc----cccccccCcCCcccEEEEECCCCCCHHHHHHH
Confidence 346778999988 9999899999999999999999998763 22222222223333 2333222 122222211
Q ss_pred hcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecCC
Q 017064 256 LANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 294 (378)
. ..+..+++.|.++|+++.++...
T Consensus 103 ~---------------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 Y---------------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred H---------------HHHHHHHHhccCCCEEEEEcccc
Confidence 1 12345677788888888887543
No 300
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.018 Score=52.03 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHHHHh----cC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGLL----AN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~~~~----~~ 258 (378)
+..+++|+|++|++|...++.+...|++|+++.+. .++.+ .++..+... ++..+-.+.+.+.+.. ..
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARR----VEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 34689999999999999998888889999888753 22222 223344432 2222222222222221 11
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|.++|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (274)
T PRK07775 85 LGEIEVLVSGAGD 97 (274)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999985
No 301
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.46 E-value=0.022 Score=47.67 Aligned_cols=79 Identities=25% Similarity=0.384 Sum_probs=54.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--cEE-EccC--c-ccHHH-HHHHhcCCCCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DEV-FTES--Q-LEVKN-VKGLLANLPEP 262 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga--~~v-i~~~--~-~~~~~-i~~~~~~~g~~ 262 (378)
+..+|.|++.++|.+..|.+...|++|++.... +.+..+.++.+|. +|. +..+ + .+++. +.+.....|.+
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~---~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLD---SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecc---hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 567999999999999999999999999988753 4455566677776 433 2211 1 23332 33333334459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
+++++|+|-
T Consensus 92 svlVncAGI 100 (256)
T KOG1200|consen 92 SVLVNCAGI 100 (256)
T ss_pred cEEEEcCcc
Confidence 999999994
No 302
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.017 Score=51.77 Aligned_cols=83 Identities=17% Similarity=0.170 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~~ 262 (378)
.+.+++|+|++|++|...++.+...|++|+++.+... ..+..+.+...+... .+..+-.+.+.+ .+.....+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999988889999988875421 111122223334332 222222222222 2222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999984
No 303
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.45 E-value=0.0054 Score=52.93 Aligned_cols=104 Identities=21% Similarity=0.240 Sum_probs=63.2
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEE--EccCcccHHHHHHH
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGL 255 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~v--i~~~~~~~~~i~~~ 255 (378)
+.+...+++|++||-.|+ +.|+.++-+++..|. +|+.+-+.+.-.+...+.+..+|.+.+ +..+... -+
T Consensus 64 ~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~-----g~ 136 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE-----GW 136 (209)
T ss_dssp HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG-----TT
T ss_pred HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh-----cc
Confidence 334577999999999995 778999999998875 466655321111222344455666532 2222111 01
Q ss_pred hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064 256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g 291 (378)
... +.||.|+-+.+-+.. ...++.|++||++|..-
T Consensus 137 ~~~-apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi 172 (209)
T PF01135_consen 137 PEE-APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI 172 (209)
T ss_dssp GGG--SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred ccC-CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence 111 249999988887666 56779999999999854
No 304
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.45 E-value=0.027 Score=47.03 Aligned_cols=98 Identities=27% Similarity=0.300 Sum_probs=65.3
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHHHHHHhcC
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLAN 258 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~i~~~~~~ 258 (378)
.++++|+.++=.|+ +.|..++++|+.. ..+|+++.+ ++++.+.. .++|.+.+..-...-.+.+. +
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~----~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~----~ 99 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIER----DEEALELIERNAARFGVDNLEVVEGDAPEALP----D 99 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEec----CHHHHHHHHHHHHHhCCCcEEEEeccchHhhc----C
Confidence 67899998777776 6688888999544 468999884 56665544 46887744322222112222 2
Q ss_pred CCCCcEEEeCCCCc---cHHHHHHhcccCCEEEEEe
Q 017064 259 LPEPALGFNCVGGN---SASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 259 ~g~~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~g 291 (378)
...+|.+|---|.. .++.+|..|+++|++|.-.
T Consensus 100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 22399999666642 3488999999999998654
No 305
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.013 Score=52.88 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=31.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
+++++||+|++|++|...++.+...|++|+++.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999999999999999999999988853
No 306
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.026 Score=49.12 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=50.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 268 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~ 268 (378)
.++||+|++|.+|...+..+... .+|+++.+. .++.+.+. .....+++..+-.+.+.+.+.....+++|.+|.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRP----AERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCC----HHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 58999999999999998877766 899988853 33333332 2222233333333445555555443359999999
Q ss_pred CCC
Q 017064 269 VGG 271 (378)
Q Consensus 269 ~g~ 271 (378)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 985
No 307
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.43 E-value=0.016 Score=51.73 Aligned_cols=84 Identities=20% Similarity=0.202 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ccCcc-cHHH-HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi--~~~~~-~~~~-i~~~~~~~g~~ 262 (378)
++.+++|.|+++++|...+..+...|++|+++.+..+...+..+.++..|.. ..+ |..+. .+.. +.......+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999888888999999886321111111222334432 222 22221 1211 22222223359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999985
No 308
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.42 E-value=0.025 Score=49.06 Aligned_cols=99 Identities=24% Similarity=0.261 Sum_probs=62.2
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccHHHH
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNV 252 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~i 252 (378)
.+...+++|++||-.|+ +.|..+..+++..+ .+|+++.. +++-.+.+ +..|... ++..+...
T Consensus 69 ~~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~----~~~~~~~a~~~l~~~g~~~v~~~~gd~~~---- 138 (212)
T PRK13942 69 CELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIER----IPELAEKAKKTLKKLGYDNVEVIVGDGTL---- 138 (212)
T ss_pred HHHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCeEEEECCccc----
Confidence 34467899999999996 67888888888775 47777763 45444444 3455432 22222110
Q ss_pred HHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEEEe
Q 017064 253 KGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~g 291 (378)
..... +.+|+|+-.... ......++.|++||+++..-
T Consensus 139 -~~~~~-~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 139 -GYEEN-APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred -CCCcC-CCcCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 01112 249999765544 33467789999999988754
No 309
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.041 Score=49.83 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=57.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCccc---HHHHHHHhcCCCCCcE
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKNVKGLLANLPEPAL 264 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~---~~~i~~~~~~~g~~Dv 264 (378)
+++++|.|+ |++|...+..+. .|++|+++.+.....++..+.++..|... .+..+-.+ .+.+.+.....+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899998 799999998875 79999998853211111122233334332 23222222 2222222222345999
Q ss_pred EEeCCCCcc----H---------------HHHHHhcccCCEEEEEecC
Q 017064 265 GFNCVGGNS----A---------------SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 265 vid~~g~~~----~---------------~~~~~~l~~~G~~v~~g~~ 293 (378)
+|+++|... . +..+..+..+|+++.++..
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 999998521 1 2234455567777777644
No 310
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.41 E-value=0.011 Score=52.51 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=32.7
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
..++.+++|.|++|++|...++.+...|++|+++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 4578899999999999999998888889999988864
No 311
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.40 E-value=0.021 Score=50.63 Aligned_cols=84 Identities=12% Similarity=0.160 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
++.++||+|++|++|...++.+...|++|+++.+..+...+..+.++..+.. .++..+-.+.+. +.......+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998889999988875321111111222333322 223333222222 22222223359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999983
No 312
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.025 Score=51.06 Aligned_cols=78 Identities=21% Similarity=0.206 Sum_probs=49.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEEccCcccHHHHH----HHhcCCCCCc
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVFTESQLEVKNVK----GLLANLPEPA 263 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi~~~~~~~~~i~----~~~~~~g~~D 263 (378)
.++||+|++|++|...++.+...|.+|+++.+ +.++.+.++. .+.. .++..+-.+.+.+. +.....+++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVR----RPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999888888999999885 4555444432 2322 12222222222222 2222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|.++|.
T Consensus 79 ~vi~~ag~ 86 (276)
T PRK06482 79 VVVSNAGY 86 (276)
T ss_pred EEEECCCC
Confidence 99999984
No 313
>PRK12743 oxidoreductase; Provisional
Probab=96.39 E-value=0.016 Score=51.72 Aligned_cols=83 Identities=12% Similarity=0.166 Sum_probs=49.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-HHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-EAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
++++||+|+++++|...++.+...|++|+++.+...... +..+.++..|... .+..+-.+.+. +.+.....+.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999989999988764321111 1122334455432 22222222211 22222222359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999984
No 314
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.38 E-value=0.085 Score=41.55 Aligned_cols=96 Identities=14% Similarity=0.218 Sum_probs=63.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHH------------------
Q 017064 192 IVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN------------------ 251 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~------------------ 251 (378)
|.|+|++|.+|..+.++.+... .+|++.+-.. ..+.-.++++++...++.-.++...+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~-n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS-NIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS-THHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 6799999999999999999887 7888877542 233445677889988887666543222
Q ss_pred --HHHHhcCCCCCcEEEeCCCC-ccHHHHHHhcccCCEEEE
Q 017064 252 --VKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVT 289 (378)
Q Consensus 252 --i~~~~~~~g~~Dvvid~~g~-~~~~~~~~~l~~~G~~v~ 289 (378)
+.++.... .+|+|+.+..+ .-+...+..++.|-++-+
T Consensus 80 ~~l~~~~~~~-~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEP-EVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHTHT-T-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHHhcCC-CCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 22333222 38898887766 445777788887766544
No 315
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.016 Score=52.36 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=31.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~ 223 (378)
.+.++||+|++|++|...++.+...|++|+++.+..
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 467999999999999999998888899999988653
No 316
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.36 E-value=0.029 Score=52.06 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cEEEccCcccHHHHHHHhcCCCCCcE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVKGLLANLPEPAL 264 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga---~~vi~~~~~~~~~i~~~~~~~g~~Dv 264 (378)
.+.+|||+|++|.+|...+..+...|.+|+++++......+........+. -.++..+-.+.+.+.+...+ +|+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~ 80 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG---CET 80 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC---CCE
Confidence 468999999999999999998888999998887643211111111111121 12232222233445555543 999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
||.++|.
T Consensus 81 vih~A~~ 87 (325)
T PLN02989 81 VFHTASP 87 (325)
T ss_pred EEEeCCC
Confidence 9999984
No 317
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.026 Score=51.06 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=49.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
+.+|||+|++|++|...++.+...|.+|+++.+ +.++.+.+. .++.. ..+..+-.+.+. +.......+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR----DTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999888888999998885 344443333 23322 222222222222 22222223359
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.|+|.
T Consensus 79 d~vi~~ag~ 87 (275)
T PRK08263 79 DIVVNNAGY 87 (275)
T ss_pred CEEEECCCC
Confidence 999999985
No 318
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.35 E-value=0.056 Score=47.93 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=47.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
.++++||+|++|++|...++.+...|++|+++.+. . ....+.. ..+..+-.+.+. +.+.....+.+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~----~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA----F-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc----h-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999888899999998853 2 1122221 222222122222 22222223459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 78 d~vi~~ag~ 86 (252)
T PRK08220 78 DVLVNAAGI 86 (252)
T ss_pred CEEEECCCc
Confidence 999999985
No 319
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.33 E-value=0.023 Score=52.32 Aligned_cols=83 Identities=17% Similarity=0.127 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcEEE-ccCccc---HHHHH-HHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADEVF-TESQLE---VKNVK-GLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~vi-~~~~~~---~~~i~-~~~~~~g~ 261 (378)
.|+++||+|+++++|...++.+...|++|++..+..... ++..+.++..|....+ ..+-.+ ...+. .... .|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence 468999999999999999988888899988876431111 1112233344543322 222222 22222 2222 346
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 320
>PRK09186 flagellin modification protein A; Provisional
Probab=96.32 E-value=0.021 Score=50.91 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=31.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.++++||+|++|++|...+..+...|++|+++.+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 46899999999999999999998899999988753
No 321
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.024 Score=51.06 Aligned_cols=81 Identities=16% Similarity=0.118 Sum_probs=48.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcccHHHHHH----HhcCCCCCcEE
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKG----LLANLPEPALG 265 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~i~~----~~~~~g~~Dvv 265 (378)
++||+|++|++|...++.+...|++|+++.+.....++..+.++..+.+.. +..+-.+.+.+.+ .....+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999988888899999888542111111222333343332 2222222222222 22222359999
Q ss_pred EeCCCC
Q 017064 266 FNCVGG 271 (378)
Q Consensus 266 id~~g~ 271 (378)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999984
No 322
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.29 E-value=0.051 Score=44.68 Aligned_cols=89 Identities=10% Similarity=0.095 Sum_probs=54.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|.+|+|.|+ |.+|.--++.+...|++|+++.. +..+.+.+++... +..+....+.+ .++|+||-
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp------~~~~~l~~l~~i~-~~~~~~~~~dl-------~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP------EICKEMKELPYIT-WKQKTFSNDDI-------KDAHLIYA 76 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC------ccCHHHHhccCcE-EEecccChhcC-------CCceEEEE
Confidence 5689999999 99999888888888999987741 1112223343222 11111111111 13899999
Q ss_pred CCCCccHHHHHHhcccCCEEEEEe
Q 017064 268 CVGGNSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~~~~~~~~l~~~G~~v~~g 291 (378)
+++.+..+..+...+..+.++...
T Consensus 77 aT~d~e~N~~i~~~a~~~~~vn~~ 100 (157)
T PRK06719 77 ATNQHAVNMMVKQAAHDFQWVNVV 100 (157)
T ss_pred CCCCHHHHHHHHHHHHHCCcEEEC
Confidence 999988876665554444455543
No 323
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.29 E-value=0.026 Score=50.37 Aligned_cols=80 Identities=11% Similarity=0.092 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc-EEEccCcccHHHH----HHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNV----KGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~-~vi~~~~~~~~~i----~~~~~~~g~ 261 (378)
.++++||+|++|++|...++.+...|++|+++.+ +.++.+.+ .+++.. ..+..+-.+.+.+ .+.....+.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADI----KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999888999998875 34433332 333322 2222222222222 222222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (257)
T PRK07067 81 IDILFNNAAL 90 (257)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 324
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.28 E-value=0.063 Score=47.83 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-h-CCCcEE-EccCcccHHHHHHHhcCCCCCcE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G-LGADEV-FTESQLEVKNVKGLLANLPEPAL 264 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~-~ga~~v-i~~~~~~~~~i~~~~~~~g~~Dv 264 (378)
.+.+|||+|++|.+|...++.+...|.+|++++|. .++..... . .++..+ .|..+. ...+.+.... ++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~----~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~~~--~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD----VDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAIGD--DSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC----HHHHHHhcccCCceEEEEeeCCCC-HHHHHHHhhc--CCCE
Confidence 35789999999999999998888889999998863 33332221 1 122222 122221 2233333321 3999
Q ss_pred EEeCCCCcc--------------HHHHHHhccc--CCEEEEEecC
Q 017064 265 GFNCVGGNS--------------ASKVLKFLSQ--GGTMVTYGGM 293 (378)
Q Consensus 265 vid~~g~~~--------------~~~~~~~l~~--~G~~v~~g~~ 293 (378)
||.++|... ....++.+.. .+++|+++..
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 999887421 1234444443 3689888754
No 325
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.27 E-value=0.11 Score=44.75 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=59.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|.+|||.|+ |.+|...++.+...|++|+++... ..++-.++ .+.|--..+. .+..... .. ++|+||-
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~--~~~~l~~l-~~~~~i~~~~-~~~~~~d----l~---~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE--LESELTLL-AEQGGITWLA-RCFDADI----LE---GAFLVIA 75 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC--CCHHHHHH-HHcCCEEEEe-CCCCHHH----hC---CcEEEEE
Confidence 4689999999 999999999999999999877642 22333333 3333222221 1111111 22 3999999
Q ss_pred CCCCccH-HHHHHhcccCCEEEEEe
Q 017064 268 CVGGNSA-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~~-~~~~~~l~~~G~~v~~g 291 (378)
+++.+.. .......+..|.+|.+.
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 9998755 45556666778777665
No 326
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.028 Score=50.21 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=48.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHHHH----HHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVK----GLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~i~----~~~~~ 258 (378)
.+.++||+|++|++|...++.+...|++|+++.+. +.++.+ .++..+... .+..+-.+.+.+. +....
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR---SRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999998888899999887753 222222 222334332 2222222222222 22222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|.++|.
T Consensus 85 ~~~iD~vi~~ag~ 97 (258)
T PRK09134 85 LGPITLLVNNASL 97 (258)
T ss_pred cCCCCEEEECCcC
Confidence 2359999999984
No 327
>PRK09135 pteridine reductase; Provisional
Probab=96.26 E-value=0.028 Score=49.70 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=31.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.+.++||+|++|++|...++.+...|++|+++.+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999999999998888889999998864
No 328
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.25 E-value=0.044 Score=42.64 Aligned_cols=98 Identities=22% Similarity=0.248 Sum_probs=61.0
Q ss_pred HhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH----HhCCCcE--EEccCcccHHHHHHH
Q 017064 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNVKGL 255 (378)
Q Consensus 183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~i~~~ 255 (378)
...+.++++|+-.|+ |. |..+..+++..+ .+++++. .++...+.+ +.++... ++..+..+ ....
T Consensus 14 ~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~- 84 (124)
T TIGR02469 14 KLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIE----RNPEALRLIERNARRFGVSNIVIVEGDAPE--ALED- 84 (124)
T ss_pred HcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEc----CCHHHHHHHHHHHHHhCCCceEEEeccccc--cChh-
Confidence 356677889999998 44 999999999875 5776665 355555444 3344432 22222111 0111
Q ss_pred hcCCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEEe
Q 017064 256 LANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~g 291 (378)
..+ .+|+|+...+.. .++.+.+.|+++|+++...
T Consensus 85 ~~~--~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 85 SLP--EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred hcC--CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 112 499999765433 3477899999999998654
No 329
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.23 E-value=0.037 Score=48.78 Aligned_cols=80 Identities=23% Similarity=0.190 Sum_probs=48.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcE-EEccCcccHHHHHH----HhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VFTESQLEVKNVKG----LLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~~-vi~~~~~~~~~i~~----~~~~~g~ 261 (378)
++.++||+|++|++|...++.+...|++|+...+ ..++.+ ....++... ++..+-.+.+.+.+ .....++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT----RVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999888888998776653 333333 333444322 22222222222222 2222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12936 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 330
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.23 E-value=0.035 Score=51.44 Aligned_cols=81 Identities=20% Similarity=0.288 Sum_probs=50.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCC---cEEEccCcccHHHHHHHhcCCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA---DEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga---~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
..|++|||+|++|.+|...+..+...|.+|++++|... ..++...+.. .+. -.++..+-.+.+.+.+...+ +
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~ 78 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT-DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG---C 78 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc-chHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC---C
Confidence 35789999999999999999888888999998887532 1122222211 111 12222222233345554443 9
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|+||.+++.
T Consensus 79 d~vih~A~~ 87 (322)
T PLN02986 79 DAVFHTASP 87 (322)
T ss_pred CEEEEeCCC
Confidence 999999973
No 331
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.23 E-value=0.024 Score=50.73 Aligned_cols=84 Identities=12% Similarity=0.168 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHH-HHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE-AKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~-~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~ 261 (378)
.++++||+|+++++|...++.+...|++++++.+......+ ..+.++..+... .+..+-.+.+. +.......++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999887753211111 112233344332 22222222222 2223333345
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 332
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.017 Score=51.93 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHH----HHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN----VKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~----i~~~~~~~g~~D 263 (378)
.+++++|+|++|++|...++.+...|++|+++.+. .++.+.. .+.. ++..+-.+.+. +.......|.+|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~----~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN----PARAAPI--PGVE-LLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC----hhhcccc--CCCe-eEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 35789999999999999998888889999998853 2222211 1222 22222222222 222222334599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|+++|.
T Consensus 76 ~li~~ag~ 83 (270)
T PRK06179 76 VLVNNAGV 83 (270)
T ss_pred EEEECCCC
Confidence 99999985
No 333
>PRK05599 hypothetical protein; Provisional
Probab=96.22 E-value=0.019 Score=51.04 Aligned_cols=80 Identities=21% Similarity=0.181 Sum_probs=46.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCccc---HHH-HHHHhcCCCCCcE
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLE---VKN-VKGLLANLPEPAL 264 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~---~~~-i~~~~~~~g~~Dv 264 (378)
+++|+|+++++|...+..+. .|++|+.+.|..+..++..+.+++.|.+ ..+..+-.+ .+. +.+.....|++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999998887665 4999999886422111222233444533 233222222 222 2222222345999
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
+|+++|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9999985
No 334
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.22 E-value=0.067 Score=49.16 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=29.0
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEE
Q 017064 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSIN 218 (378)
Q Consensus 188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~ 218 (378)
.|+++||+|+ +.++|.+.++.+...|++|++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 5899999999 799999999999999999988
No 335
>PRK06398 aldose dehydrogenase; Validated
Probab=96.20 E-value=0.021 Score=51.12 Aligned_cols=35 Identities=14% Similarity=0.305 Sum_probs=31.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.|+++||+|+++++|...+..+...|++|+++.+.
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999999999999999999999988754
No 336
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.20 E-value=0.027 Score=55.50 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=52.7
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
+.+|++|+|+|. |..|++++++++..|++|++..+ .+++.+.+++.|+..+...+. .+.+ . .+|+|
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~----~~~~~~~l~~~g~~~~~~~~~--~~~l----~---~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDD----DPDALRPHAERGVATVSTSDA--VQQI----A---DYALV 74 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHhCCCEEEcCcch--HhHh----h---cCCEE
Confidence 567899999999 99999999999999999988552 344455567778754322121 1112 1 38999
Q ss_pred EeCCCCcc
Q 017064 266 FNCVGGNS 273 (378)
Q Consensus 266 id~~g~~~ 273 (378)
|.+.|-+.
T Consensus 75 V~SpGi~~ 82 (488)
T PRK03369 75 VTSPGFRP 82 (488)
T ss_pred EECCCCCC
Confidence 99999653
No 337
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.19 E-value=0.03 Score=52.68 Aligned_cols=78 Identities=17% Similarity=0.225 Sum_probs=50.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhC--CC-cEEEccCcccHHHHHHHhcCCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGL--GA-DEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~--ga-~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
..+.+|||+|++|.+|...++.+...|.+|+++.+. .++.. ....+ +. -.++..+-.+.+.+.+...+ +
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~ 80 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD----PAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG---C 80 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC---C
Confidence 456799999999999999999998889999988753 22222 22222 11 12233332333445555543 9
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|+||.+++.
T Consensus 81 d~Vih~A~~ 89 (353)
T PLN02896 81 DGVFHVAAS 89 (353)
T ss_pred CEEEECCcc
Confidence 999999874
No 338
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.18 E-value=0.048 Score=49.17 Aligned_cols=85 Identities=15% Similarity=0.114 Sum_probs=55.4
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEc---cCcc---cHHH----H
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFT---ESQL---EVKN----V 252 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~---~~~~---~~~~----i 252 (378)
.+.++-.+|+|.|++.++|++.+..++..|++|.++.| +.+|+..+. +++....+. +... +-++ +
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar----~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~ 103 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITAR----SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI 103 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccCceEEEec----cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence 33455579999999999999999999999999999996 556655443 344322221 1111 1122 2
Q ss_pred HHHhcCCCCCcEEEeCCCCc
Q 017064 253 KGLLANLPEPALGFNCVGGN 272 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~~ 272 (378)
.++..-.+.+|.+|.|+|..
T Consensus 104 ~~l~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 104 EELRDLEGPIDNLFCCAGVA 123 (331)
T ss_pred hhhhhccCCcceEEEecCcc
Confidence 22222223599999999964
No 339
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.17 E-value=0.027 Score=48.58 Aligned_cols=98 Identities=15% Similarity=0.090 Sum_probs=61.7
Q ss_pred HHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCc---EEEccCcccHHHH
Q 017064 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGAD---EVFTESQLEVKNV 252 (378)
Q Consensus 182 ~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~---~vi~~~~~~~~~i 252 (378)
+...++++++||=.|+ +.|..+..+++..+ .+|+++.. +++..+.+ +..|.. .++..+... ..
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~----~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~--~~ 137 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEI----VKELAIYAAQNIERLGYWGVVEVYHGDGKR--GL 137 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCcEEEEECCccc--CC
Confidence 4467789999999986 66888888888764 57777763 44443333 345543 223222111 01
Q ss_pred HHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064 253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g 291 (378)
...+.+|+|+-+.....+ ...++.|++||+++..-
T Consensus 138 ----~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 138 ----EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ----ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 111249999977665444 67789999999997653
No 340
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.025 Score=50.50 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=48.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC--cEEEccCcccHHHHH----HHhcCCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--DEVFTESQLEVKNVK----GLLANLPE 261 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga--~~vi~~~~~~~~~i~----~~~~~~g~ 261 (378)
++++||+|++|++|...+..+...|++|+++.+. .++.+ ....+.. -+.+..+-.+.+.+. ......++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID----AAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999998888889999988853 33332 2233321 122222222222222 22222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 78 ~d~vi~~ag~ 87 (257)
T PRK07074 78 VDVLVANAGA 87 (257)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 341
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.019 Score=50.22 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=48.2
Q ss_pred EEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhC--CC-cEEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064 193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGL--GA-DEVFTESQLEVKNVKGLLANLPEPALGFNC 268 (378)
Q Consensus 193 lV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~--ga-~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~ 268 (378)
||+|++|++|...++.+...|++|+++.+. .++.+. ...+ +. .+++..+-.+.+.+.+.....+++|++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRS----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999998888889999988853 333322 2222 22 223333333334454444444469999999
Q ss_pred CCC
Q 017064 269 VGG 271 (378)
Q Consensus 269 ~g~ 271 (378)
+|.
T Consensus 77 ag~ 79 (230)
T PRK07041 77 AAD 79 (230)
T ss_pred CCC
Confidence 984
No 342
>PRK06484 short chain dehydrogenase; Validated
Probab=96.16 E-value=0.025 Score=56.28 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcEE---EccCcc-cHHH-HHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV---FTESQL-EVKN-VKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~ga~~v---i~~~~~-~~~~-i~~~~~~~g~ 261 (378)
.++++||+|+++++|...++.+...|++|+.+.+ +.++. +..+++|.... .|..+. ..+. +.+.....|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR----NVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGR 79 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999998875 34443 33445654332 222221 1222 2222222235
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|+++|.
T Consensus 80 iD~li~nag~ 89 (520)
T PRK06484 80 IDVLVNNAGV 89 (520)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 343
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.15 E-value=0.039 Score=48.80 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHH----HHHHhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKN----VKGLLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~ 258 (378)
.+.+++|+|++|++|...+..+...|++|+++.+. ++++. +.++..+.+. .+..+-.+.+. +.+....
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS---SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC---cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999998888889999876532 22222 2233344332 23222222222 2222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+.+|++|.++|.
T Consensus 82 ~~~id~vi~~ag~ 94 (247)
T PRK12935 82 FGKVDILVNNAGI 94 (247)
T ss_pred cCCCCEEEECCCC
Confidence 3459999999985
No 344
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.036 Score=49.48 Aligned_cols=84 Identities=21% Similarity=0.323 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHHHHH----HhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKNVKG----LLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~i~~----~~~~ 258 (378)
.+.++||+|++|++|...++.+...|++|+++++......++. +.++..+... .+..+-.+.+.+.+ ....
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999889999777764321222222 2223344332 22222222222222 2222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|+++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2359999999985
No 345
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.13 E-value=0.049 Score=49.19 Aligned_cols=102 Identities=15% Similarity=0.094 Sum_probs=61.1
Q ss_pred HHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhC---CCcEEEccCcccHHH
Q 017064 176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGL---GADEVFTESQLEVKN 251 (378)
Q Consensus 176 a~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~---ga~~vi~~~~~~~~~ 251 (378)
...++.+......+++++|.|+ |++|.+.+..+...|++++++.| +.++. ++++.+ |.......+ +
T Consensus 104 ~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R----~~~~~~~la~~~~~~~~~~~~~~~-----~ 173 (270)
T TIGR00507 104 LVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANR----TVSKAEELAERFQRYGEIQAFSMD-----E 173 (270)
T ss_pred HHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhhcCceEEechh-----h
Confidence 3344444233455789999999 89999999888888988877764 33443 333333 322222111 1
Q ss_pred HHHHhcCCCCCcEEEeCCCCccH---H---HHHHhcccCCEEEEEec
Q 017064 252 VKGLLANLPEPALGFNCVGGNSA---S---KVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 252 i~~~~~~~g~~Dvvid~~g~~~~---~---~~~~~l~~~G~~v~~g~ 292 (378)
... ...|+||+|++.... . -....++++..++.+..
T Consensus 174 ---~~~--~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 174 ---LPL--HRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred ---hcc--cCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 111 139999999986321 1 12456778878877753
No 346
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.13 E-value=0.028 Score=46.38 Aligned_cols=81 Identities=16% Similarity=0.288 Sum_probs=45.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EccCccc---HHH-HHHHhcCCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLE---VKN-VKGLLANLP 260 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~v-i~~~~~~---~~~-i~~~~~~~g 260 (378)
+++||+|+++++|...++.+...|+++++++... ...++. +.++..+.... +..+-.+ .+. +.......+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999988877777555554321 012332 23344563322 2222112 222 222221222
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
.+|++|.|+|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 59999999985
No 347
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.12 E-value=0.043 Score=51.58 Aligned_cols=93 Identities=10% Similarity=0.058 Sum_probs=57.4
Q ss_pred HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC-----cEEEccCccc
Q 017064 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA-----DEVFTESQLE 248 (378)
Q Consensus 175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga-----~~vi~~~~~~ 248 (378)
|||.-|+....++. .+|||+||+|-+|...+..+...|.+|+++.+...........+ ...+. -..+..+-.+
T Consensus 2 ~~~~~~~~~~~~~~-~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLVLAP-KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhcccccC-CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56777766455444 78999999999999999999988999998876432222222111 11111 1122222223
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCC
Q 017064 249 VKNVKGLLANLPEPALGFNCVGG 271 (378)
Q Consensus 249 ~~~i~~~~~~~g~~Dvvid~~g~ 271 (378)
.+.+..+..+ +|+||.+++.
T Consensus 81 ~~~l~~~~~~---~d~ViHlAa~ 100 (348)
T PRK15181 81 FTDCQKACKN---VDYVLHQAAL 100 (348)
T ss_pred HHHHHHHhhC---CCEEEECccc
Confidence 3445555443 9999999873
No 348
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.12 E-value=0.029 Score=49.46 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=30.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
+..+|||+|++|.+|...+..+...|.+|+++++.
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 34689999999999999999998899998887754
No 349
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.10 E-value=0.48 Score=45.05 Aligned_cols=93 Identities=19% Similarity=0.268 Sum_probs=61.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
-.+.+|||.|+ |-+|.+++..+...|.+.+.++.. ..+...++++++|+..+ ...++...... +|+||
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNR--T~erA~~La~~~~~~~~------~l~el~~~l~~---~DvVi 243 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANR--TLERAEELAKKLGAEAV------ALEELLEALAE---ADVVI 243 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcC--CHHHHHHHHHHhCCeee------cHHHHHHhhhh---CCEEE
Confidence 35689999999 999999999999899765555532 24444567788995443 12345554543 99999
Q ss_pred eCCCCccH----HHHHHhcccCCE--EEEEe
Q 017064 267 NCVGGNSA----SKVLKFLSQGGT--MVTYG 291 (378)
Q Consensus 267 d~~g~~~~----~~~~~~l~~~G~--~v~~g 291 (378)
.++|.+.. ....+.++..-+ ++.++
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEec
Confidence 99998653 344455554433 44554
No 350
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.10 E-value=0.1 Score=47.12 Aligned_cols=84 Identities=15% Similarity=0.093 Sum_probs=54.3
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-cEEEccCc-ccH----HHHHHHhcCC
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQ-LEV----KNVKGLLANL 259 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga-~~vi~~~~-~~~----~~i~~~~~~~ 259 (378)
--+++.|+|+|+.+++|...+.-+...|.+|++.|-.+.+.++.....++-.. +..+|-.+ +++ +-+++..+..
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 34567899999999999988888888999999999543333333333321111 11233322 222 3466666776
Q ss_pred CCCcEEEeCCC
Q 017064 260 PEPALGFNCVG 270 (378)
Q Consensus 260 g~~Dvvid~~g 270 (378)
| .=-+||++|
T Consensus 106 g-LwglVNNAG 115 (322)
T KOG1610|consen 106 G-LWGLVNNAG 115 (322)
T ss_pred c-ceeEEeccc
Confidence 6 888999998
No 351
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.09 E-value=0.045 Score=50.65 Aligned_cols=79 Identities=20% Similarity=0.173 Sum_probs=48.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHH-HHHhCC---Cc-EEE--ccCcc-cHHH-HHHHhcC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKE-KLKGLG---AD-EVF--TESQL-EVKN-VKGLLAN 258 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~-~~~~~g---a~-~vi--~~~~~-~~~~-i~~~~~~ 258 (378)
+.+++|+|+++++|...++.+...| ++|+.+.+. +++.+ ...+++ .. .++ |-.+. .++. +.+....
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 78 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRD----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES 78 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCC----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5689999999999999998888889 899988853 33332 223332 11 122 22221 1222 2222222
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|++|+++|.
T Consensus 79 ~~~iD~lI~nAG~ 91 (314)
T TIGR01289 79 GRPLDALVCNAAV 91 (314)
T ss_pred CCCCCEEEECCCc
Confidence 2359999999884
No 352
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.08 E-value=0.035 Score=49.41 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=48.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EEEccCcccHHH----HHHHhcCCCCCc
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVFTESQLEVKN----VKGLLANLPEPA 263 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~-~vi~~~~~~~~~----i~~~~~~~g~~D 263 (378)
+++||+|++|++|...+..+...|++|+++.+..... .+..+.++..+.. .++..+-.+.+. +.......+.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999988888899999887542111 1112223333332 222222222222 222222223599
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999874
No 353
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.07 E-value=0.049 Score=47.36 Aligned_cols=100 Identities=20% Similarity=0.215 Sum_probs=61.6
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHH----HhCCCcEE--EccCcccHHH
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEV--FTESQLEVKN 251 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~ga~~v--i~~~~~~~~~ 251 (378)
+.+...++++++||-.|+ +.|..+..+++..+. +|+++.. +++..+.+ +++|.+.+ +..+.. .
T Consensus 69 ~~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~----~~~~~~~A~~~~~~~g~~~v~~~~~d~~---~ 139 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIER----IPELAEKAERRLRKLGLDNVIVIVGDGT---Q 139 (215)
T ss_pred HHHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeC----CHHHHHHHHHHHHHCCCCCeEEEECCcc---c
Confidence 334467899999999986 668888888887654 5777663 44444443 45565432 211111 1
Q ss_pred HHHHhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEEe
Q 017064 252 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 252 i~~~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~g 291 (378)
. .... +.||+|+-+.... ......+.|++||+++..-
T Consensus 140 ~--~~~~-~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 140 G--WEPL-APYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred C--Cccc-CCCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 0 0111 2499988654443 3467789999999988654
No 354
>PRK04148 hypothetical protein; Provisional
Probab=96.07 E-value=0.063 Score=42.55 Aligned_cols=81 Identities=17% Similarity=0.163 Sum_probs=52.4
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
...+.++++.|. | .|...++.++..|.+|+++. .++++.+.+++.+.+.+.+.--. ... ++-. ++|++
T Consensus 14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaID----i~~~aV~~a~~~~~~~v~dDlf~--p~~-~~y~---~a~li 81 (134)
T PRK04148 14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVID----INEKAVEKAKKLGLNAFVDDLFN--PNL-EIYK---NAKLI 81 (134)
T ss_pred cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhCCeEEECcCCC--CCH-HHHh---cCCEE
Confidence 345688999999 6 88755555667899999988 57888888888877655432110 001 1111 37788
Q ss_pred EeCCCCccHHHHH
Q 017064 266 FNCVGGNSASKVL 278 (378)
Q Consensus 266 id~~g~~~~~~~~ 278 (378)
..+-..+.++..+
T Consensus 82 ysirpp~el~~~~ 94 (134)
T PRK04148 82 YSIRPPRDLQPFI 94 (134)
T ss_pred EEeCCCHHHHHHH
Confidence 8777666665443
No 355
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.05 E-value=0.031 Score=49.64 Aligned_cols=82 Identities=10% Similarity=0.121 Sum_probs=48.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCCcE
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEPAL 264 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~Dv 264 (378)
++++|.|++|++|...++.+...|++|+.+.+.....++....++..+... .+..+-.+.+. +.+.....+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 379999999999999998888899999888753111111112233344322 22222222222 2222223335899
Q ss_pred EEeCCCC
Q 017064 265 GFNCVGG 271 (378)
Q Consensus 265 vid~~g~ 271 (378)
+|.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999985
No 356
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.04 E-value=0.032 Score=49.26 Aligned_cols=83 Identities=17% Similarity=0.268 Sum_probs=47.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEE-ecCCCCcHHHHHHHHhCCCcE-EEccCcccHHHHHH----HhcCCCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-IRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKG----LLANLPEP 262 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~-~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~i~~----~~~~~g~~ 262 (378)
++++||.|++|++|...+..+...|++++++ .+.....++..+.+...+... ++..+-.+.+.+.+ .....+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999998887889999888 543111111112222223222 22222222222222 22222349
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999999885
No 357
>PRK05855 short chain dehydrogenase; Validated
Probab=96.04 E-value=0.028 Score=56.53 Aligned_cols=84 Identities=20% Similarity=0.218 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEccCcccHHH----HHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKN----VKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g~~ 262 (378)
.+.++||+||+|++|...++.+...|++|+++.+.....++..+.++..|... ++..+-.+.+. +.+.....|.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 35789999999999999998888899999988863211111112233444322 22222222222 22222233459
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|++|+++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999985
No 358
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.04 Score=48.82 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
++++||+|++|++|...++.+...|++|+++.+.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~ 35 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARR 35 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999999888888889999988853
No 359
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.03 E-value=0.046 Score=48.85 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=49.9
Q ss_pred CCCEEEEeCC--CchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCc-EEEccCccc---HHH-HHHHhcCC
Q 017064 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLE---VKN-VKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~--~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~ 259 (378)
.+++++|+|+ ++++|...++.+...|++|+++.+.. .++..+ ...+++.. ..+..+-.+ .+. +.+.....
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR--ALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc--chhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4689999999 79999999988888999998876531 223322 33344432 122222222 222 22222223
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
|++|++|+++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 469999999984
No 360
>PLN02240 UDP-glucose 4-epimerase
Probab=96.02 E-value=0.052 Score=50.90 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=49.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCc-EEEccCcccHHHHHHHhcCCCCCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
+++|||+|++|.+|...++.+...|.+|+++.+......+....+.. .+.. ..+..+-.+.+.+.......+ +|
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~-~d 83 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR-FD 83 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC-CC
Confidence 57899999999999999988888899998886532112222222221 1111 222222223344555443333 99
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
.||++++.
T Consensus 84 ~vih~a~~ 91 (352)
T PLN02240 84 AVIHFAGL 91 (352)
T ss_pred EEEEcccc
Confidence 99999874
No 361
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.01 E-value=0.039 Score=48.97 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=30.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
+.++||+|++|++|...+..+...|++|+++.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3589999999999999998888889999998863
No 362
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.044 Score=47.72 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=49.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EccCcc-cHHHHHHHhcCCCCCcEEEe
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~v-i~~~~~-~~~~i~~~~~~~g~~Dvvid 267 (378)
++++|+|++|++|...++.+...|++|+++.+ +.++.+.++..+...+ .|-.+. .++.+.....+. ++|++|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATAR----DAAALAALQALGAEALALDVADPASVAGLAWKLDGE-ALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC----CHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCC-CCCEEEE
Confidence 47999999999999999888788999998875 3444445555554321 222221 122222222222 4999999
Q ss_pred CCCC
Q 017064 268 CVGG 271 (378)
Q Consensus 268 ~~g~ 271 (378)
++|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 9875
No 363
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.044 Score=48.71 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=28.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~ 220 (378)
.+.+++|+|++|++|...++.+...|++|++..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~ 37 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY 37 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 357999999999999999998888899987754
No 364
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.99 E-value=0.051 Score=50.26 Aligned_cols=79 Identities=20% Similarity=0.337 Sum_probs=49.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CC---cEEEccCcccHHHHHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA---DEVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-ga---~~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
.+.+|||+|++|.+|...+..+...|.+|+++++... ...+...+..+ +. -.++..+-.+...+.+...+ +|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d 78 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN-DPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG---CE 78 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC-chhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC---CC
Confidence 3678999999999999999999889999998886532 11222222221 11 12232222222344444443 99
Q ss_pred EEEeCCC
Q 017064 264 LGFNCVG 270 (378)
Q Consensus 264 vvid~~g 270 (378)
+||.+++
T Consensus 79 ~Vih~A~ 85 (322)
T PLN02662 79 GVFHTAS 85 (322)
T ss_pred EEEEeCC
Confidence 9999886
No 365
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.034 Score=49.70 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=31.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
+|+++||+|++|++|...++.+...|++|+++.+.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999888899999998853
No 366
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.99 E-value=0.034 Score=57.08 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=66.4
Q ss_pred cccceeccCCceEEcCCCCCHhhhhhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 143 ~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
...|.-+++...+.+ +..+.+++-.-..+ . ...-.++++||+|++|++|...++.+...|++|+++.+.
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~---------~-~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP---------K-EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC---------C-CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 455666676666666 55555665332110 0 111247899999999999999999888889999988853
Q ss_pred CCCcHHHHHHH----H-hCCCc--EEEccCcccHHH----HHHHhcCCCCCcEEEeCCCC
Q 017064 223 RAGSDEAKEKL----K-GLGAD--EVFTESQLEVKN----VKGLLANLPEPALGFNCVGG 271 (378)
Q Consensus 223 ~~~~~~~~~~~----~-~~ga~--~vi~~~~~~~~~----i~~~~~~~g~~Dvvid~~g~ 271 (378)
.++.+.+ . ..+.. ..+..+-.+.+. +.+.....|++|++|+++|.
T Consensus 448 ----~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 448 ----LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred ----HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 3332222 1 12322 122222222222 22222233459999999984
No 367
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.96 E-value=0.11 Score=48.76 Aligned_cols=99 Identities=16% Similarity=0.234 Sum_probs=68.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHH-------------
Q 017064 190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG------------- 254 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~------------- 254 (378)
++|.|+|++|++|..++...+.. .++|++++-.. ..+...+++++++..++.-.+......++.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~-n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGK-NVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57999999999999999998765 57888887331 233344567789998887655533333332
Q ss_pred -----HhcCCCCCcEEEeCCCCc-cHHHHHHhcccCCEEEEE
Q 017064 255 -----LLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTY 290 (378)
Q Consensus 255 -----~~~~~g~~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~ 290 (378)
+... ..+|+|+++.++. .+...+.+++.|-++.+.
T Consensus 81 ~~~~~l~~~-~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 81 EGLCELAAL-PEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred hHHHHHhcC-CCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 2222 1389999998874 567788888888776654
No 368
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.093 Score=44.79 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=41.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+++|.|+++++|...+..+... .+|+.+.+.. . ....|-.+ .+.++......+++|++|.++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~----~----------~~~~D~~~--~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS----G----------DVQVDITD--PASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC----C----------ceEecCCC--hHHHHHHHHhcCCCCEEEECCC
Confidence 6899999999999888777666 8888887531 1 11222222 2333333333345999999998
Q ss_pred C
Q 017064 271 G 271 (378)
Q Consensus 271 ~ 271 (378)
.
T Consensus 65 ~ 65 (199)
T PRK07578 65 K 65 (199)
T ss_pred C
Confidence 4
No 369
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.047 Score=47.72 Aligned_cols=74 Identities=16% Similarity=0.232 Sum_probs=47.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEE-EccCcc-cHHHHHHHhcCCCCCcEEEe
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQL-EVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~v-i~~~~~-~~~~i~~~~~~~g~~Dvvid 267 (378)
+++|+|+++++|...++.+...|++|+.+.+ +.++.+. .++++...+ .|..+. .++.+.+...+ ++|++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA----RRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH--HLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh--cCcEEEE
Confidence 4899999999999999988888999998875 4444433 344554332 222221 22232222222 3899999
Q ss_pred CCC
Q 017064 268 CVG 270 (378)
Q Consensus 268 ~~g 270 (378)
++|
T Consensus 76 ~ag 78 (223)
T PRK05884 76 VPA 78 (223)
T ss_pred CCC
Confidence 876
No 370
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.90 E-value=0.081 Score=47.71 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=70.3
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++..++..|....---.|++|+|.|.+..+|.-.+.++...|++|++.-. . .
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs----~-------------------t 192 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS----K-------------------T 192 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC----C-------------------C
Confidence 3567777777766765332356899999999888899999999999999886431 1 0
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+...+. ..|+||-++|.+.+-.. +++++|-.++.+|..
T Consensus 193 ~---~l~~~~~---~ADIVV~avG~~~~i~~-~~ik~gavVIDVGin 232 (285)
T PRK14189 193 R---DLAAHTR---QADIVVAAVGKRNVLTA-DMVKPGATVIDVGMN 232 (285)
T ss_pred C---CHHHHhh---hCCEEEEcCCCcCccCH-HHcCCCCEEEEcccc
Confidence 1 1223333 39999999998765222 899999999999844
No 371
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.89 E-value=0.13 Score=46.43 Aligned_cols=97 Identities=19% Similarity=0.240 Sum_probs=69.7
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
+.+||++...+..|....---.|++|+|.|.+..+|.-.+.++...||+|++.- . ..
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s---~t------------------- 191 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-I---LT------------------- 191 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-C---Cc-------------------
Confidence 456777777777776532234699999999977999999999999999987643 1 11
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+...+. ..|+|+-++|.+.+-. -+++++|..++.+|..
T Consensus 192 ---~~l~~~~~---~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 192 ---KDLSFYTQ---NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN 231 (285)
T ss_pred ---HHHHHHHH---hCCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence 11222233 2999999999877622 3578999999999943
No 372
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.84 E-value=0.093 Score=47.30 Aligned_cols=95 Identities=20% Similarity=0.185 Sum_probs=70.1
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
..||++..++..+....---.|++|+|.|.+..+|.-..+++...|++|++.-.. +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~---T--------------------- 193 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF---T--------------------- 193 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC---C---------------------
Confidence 4677777777777663323458999999998889999999999999998765421 1
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~ 292 (378)
..+...+. ..|++|.++|.+.+-. -+++++|-.++.+|.
T Consensus 194 --~~l~~~~~---~ADIvi~avG~p~~v~-~~~vk~gavVIDvGi 232 (285)
T PRK10792 194 --KNLRHHVR---NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGI 232 (285)
T ss_pred --CCHHHHHh---hCCEEEEcCCCccccc-HHHcCCCcEEEEccc
Confidence 11333333 3999999999877622 288999999999983
No 373
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.83 E-value=0.065 Score=47.19 Aligned_cols=84 Identities=14% Similarity=0.180 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-HHHHHHHhCCCcE-EEccCcccHHHH----HHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-EAKEKLKGLGADE-VFTESQLEVKNV----KGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-~~~~~~~~~ga~~-vi~~~~~~~~~i----~~~~~~~g~ 261 (378)
.+.++||+|++|++|...+..+...|++|+++.+...... +..+.++..+... .+..+-.+.+.+ .+.....++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999888999988775421111 1112223334332 222222222222 222222234
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|.+|.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 374
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.83 E-value=0.2 Score=38.58 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=63.9
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~ 271 (378)
|+|.|. |.+|+..++.++..+.+++++. .++++.+.+++.|.. ++..+..+.+.+++..-. +++.++-+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid----~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~--~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVID----RDPERVEELREEGVE-VIYGDATDPEVLERAGIE--KADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGG--CESEEEEESSS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEE----CCcHHHHHHHhcccc-cccccchhhhHHhhcCcc--ccCEEEEccCC
Confidence 688999 9999999999999666888887 578888888888844 555665555555554333 48999988887
Q ss_pred ccHH----HHHHhcccCCEEEEEe
Q 017064 272 NSAS----KVLKFLSQGGTMVTYG 291 (378)
Q Consensus 272 ~~~~----~~~~~l~~~G~~v~~g 291 (378)
+... ...+.+.+..+++...
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEE
Confidence 6542 3344455666766553
No 375
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.82 E-value=0.041 Score=48.41 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=29.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~ 221 (378)
+++||+|++|++|...++.+...|++++++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999999999999999889999998886
No 376
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.094 Score=44.62 Aligned_cols=101 Identities=18% Similarity=0.251 Sum_probs=66.8
Q ss_pred CCCEEEEeCCC-chHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcE-EEccCcc-cH----HHHHHHhcCC
Q 017064 188 SGDSIVQNGAT-SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VFTESQL-EV----KNVKGLLANL 259 (378)
Q Consensus 188 ~g~~VlV~g~~-g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~-vi~~~~~-~~----~~i~~~~~~~ 259 (378)
..+.|||+|++ |++|.+.+.-....|+.|+++.| ..+..+.+. +.|... -+|..++ .+ .++++...|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR----~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G- 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR----RLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG- 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc----ccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-
Confidence 45688999875 66999888777788999999996 455555554 666432 2333332 22 345555444
Q ss_pred CCCcEEEeCCCCccH-------------------------HH--HHHhcccCCEEEEEecCC
Q 017064 260 PEPALGFNCVGGNSA-------------------------SK--VLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 260 g~~Dvvid~~g~~~~-------------------------~~--~~~~l~~~G~~v~~g~~~ 294 (378)
+.|+.++++|.+.. .+ ....++..|++|.+|...
T Consensus 81 -kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~ 141 (289)
T KOG1209|consen 81 -KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLA 141 (289)
T ss_pred -ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEeccee
Confidence 79999999985421 11 234677899999998543
No 377
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=95.81 E-value=0.046 Score=50.44 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=46.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+|||+|++|.+|...++.+...|.+|+++.+......++.......+--..+..+-.+.+.+.+..... ++|+||+++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEH-KIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhC-CCcEEEECcc
Confidence 489999999999999999888899988765322112222222221111112222222333444443332 4999999998
Q ss_pred C
Q 017064 271 G 271 (378)
Q Consensus 271 ~ 271 (378)
.
T Consensus 80 ~ 80 (328)
T TIGR01179 80 L 80 (328)
T ss_pred c
Confidence 4
No 378
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.81 E-value=0.062 Score=47.66 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=29.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~ 221 (378)
+.++||+|++|++|...+..+...|++|+++.+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 578999999999999999988888999987764
No 379
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.80 E-value=0.23 Score=44.62 Aligned_cols=154 Identities=15% Similarity=0.112 Sum_probs=96.9
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc------------cH-HHH
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL------------EV-KNV 252 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~------------~~-~~i 252 (378)
--++..+++.|. |-.|+.++-.++..|+-|..-. -...+.+..+++|+...-..+.+ +. .+.
T Consensus 161 tv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rd----lrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~ 235 (356)
T COG3288 161 TVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARD----LRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQA 235 (356)
T ss_pred cccchhhhhhhH-HHHHHHHHHHHhhcceEEehhh----hhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHH
Confidence 345578899999 9999999999999999876554 35666666777777654322211 11 112
Q ss_pred HHHhcCCCCCcEEEeCCC---Cc--c--HHHHHHhcccCCEEEEEecCCCCCccccc--hhhhhcCceEEEEec-hhhhc
Q 017064 253 KGLLANLPEPALGFNCVG---GN--S--ASKVLKFLSQGGTMVTYGGMSKKPITVST--SAFIFKDLSLKGFWL-QKWLS 322 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g---~~--~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 322 (378)
........++|+||-++- .+ . .......|+||..+|.+..-.+.+....- .....+++++.|... .+...
T Consensus 236 ~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a 315 (356)
T COG3288 236 ELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLA 315 (356)
T ss_pred HHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhh
Confidence 222222235999998763 22 2 26788999999999999877666655432 334557888888653 22222
Q ss_pred cccHHHHHHHHHHHHHHHHcCC
Q 017064 323 SEKATECRNMIDYLLCLAREGK 344 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~l~~g~ 344 (378)
.+....+.+.+-.+++++-+.+
T Consensus 316 ~~aS~LYa~Nl~~~l~ll~~~~ 337 (356)
T COG3288 316 AQASQLYATNLVNLLKLLCKKK 337 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccC
Confidence 2334456666666666655443
No 380
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.80 E-value=0.041 Score=50.62 Aligned_cols=85 Identities=22% Similarity=0.220 Sum_probs=52.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEE--ccCcccHHHHHHHh----cCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVF--TESQLEVKNVKGLL----ANL 259 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~~vi--~~~~~~~~~i~~~~----~~~ 259 (378)
..|.+++|+|+++++|..++.-+..+|++|+.++|+....++..+.++. .....+. --|-.+.+.+++.. ...
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 4568999999999999999999999999999999753222222222222 3333332 11212233333321 222
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
+..|+.|+++|-
T Consensus 113 ~~ldvLInNAGV 124 (314)
T KOG1208|consen 113 GPLDVLINNAGV 124 (314)
T ss_pred CCccEEEeCccc
Confidence 358999999983
No 381
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.80 E-value=0.069 Score=46.20 Aligned_cols=104 Identities=17% Similarity=0.150 Sum_probs=66.7
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCc--ccHHHHH
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQ--LEVKNVK 253 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~--~~~~~i~ 253 (378)
..++.....++||=.| +.+|+.++.+|..+. -..+++++ .++++.+.+ ++.|.+..+.--. ...+.+.
T Consensus 52 ~~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE---~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~ 126 (219)
T COG4122 52 RLLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIE---RDEERAEIARENLAEAGVDDRIELLLGGDALDVLS 126 (219)
T ss_pred HHHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEe---CCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHH
Confidence 3446667888898888 589999999999886 23344443 356665555 4678776332221 2233444
Q ss_pred HHhcCCCCCcEEEeCCCC----ccHHHHHHhcccCCEEEEEe
Q 017064 254 GLLANLPEPALGFNCVGG----NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 254 ~~~~~~g~~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~g 291 (378)
+. ..+.||+||--+.- ..++.+++.|++||-++.=.
T Consensus 127 ~~--~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 127 RL--LDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred hc--cCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 42 22359999855543 23478999999999987544
No 382
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.077 Score=46.85 Aligned_cols=77 Identities=19% Similarity=0.165 Sum_probs=47.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-CcEEEccCcccHHHHHHHhcCC-CCCcEEEe
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKGLLANL-PEPALGFN 267 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~i~~~~~~~-g~~Dvvid 267 (378)
.+++|+|++|++|...+..+...|++|+++.| ++++.+.+.+.+ ....+..+-.+.+.+.+..... ...|.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGR----NQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 57999999999999888888888999998885 455554444322 1222222222233333332221 12688777
Q ss_pred CCC
Q 017064 268 CVG 270 (378)
Q Consensus 268 ~~g 270 (378)
++|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 776
No 383
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.038 Score=48.82 Aligned_cols=33 Identities=24% Similarity=0.190 Sum_probs=29.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
++++|+|++|++|...++.+...|++|+++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 579999999999999999988889999999864
No 384
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.77 E-value=0.13 Score=49.44 Aligned_cols=76 Identities=11% Similarity=0.104 Sum_probs=50.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
-.+.+|||.|+ |++|.+++..+...|++.+.++.. +.++ .+++..++...++. .+++..... .+|+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nR---t~~ra~~La~~~~~~~~~~-----~~~l~~~l~---~aDiV 246 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANR---TIEKAQKITSAFRNASAHY-----LSELPQLIK---KADII 246 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHHhcCCeEec-----HHHHHHHhc---cCCEE
Confidence 45789999999 999999999999999854444432 3444 34445565222222 123344444 39999
Q ss_pred EeCCCCccH
Q 017064 266 FNCVGGNSA 274 (378)
Q Consensus 266 id~~g~~~~ 274 (378)
|+|++.+..
T Consensus 247 I~aT~a~~~ 255 (414)
T PRK13940 247 IAAVNVLEY 255 (414)
T ss_pred EECcCCCCe
Confidence 999998654
No 385
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.086 Score=46.52 Aligned_cols=84 Identities=10% Similarity=0.106 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEccCcccHHHHHH----HhcC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVKG----LLAN 258 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~ga~~-vi~~~~~~~~~i~~----~~~~ 258 (378)
.+.+++|+|++|++|...+..+...|++|+++.+....+.++.+. +...+... ++..+-.+.+.+.+ +...
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999988888899998876432223333322 22334332 22222222222222 1122
Q ss_pred CCCCcEEEeCCCC
Q 017064 259 LPEPALGFNCVGG 271 (378)
Q Consensus 259 ~g~~Dvvid~~g~ 271 (378)
.+++|.+|.++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999985
No 386
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.76 E-value=0.061 Score=50.23 Aligned_cols=79 Identities=16% Similarity=0.286 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh---CCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG---LGADEVFTESQLEVKNVKGLLANLPEPAL 264 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~---~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv 264 (378)
.+.+|||+|++|.+|...+..+...|.+|+++++... ...+...+.. .+.-.++..+-.+.+.+.+...+ +|+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~ 83 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-NQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG---CDL 83 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc---CCE
Confidence 3689999999999999999999888999988876532 1222111111 22122333332233445555443 999
Q ss_pred EEeCCC
Q 017064 265 GFNCVG 270 (378)
Q Consensus 265 vid~~g 270 (378)
||.+++
T Consensus 84 vih~A~ 89 (338)
T PLN00198 84 VFHVAT 89 (338)
T ss_pred EEEeCC
Confidence 999997
No 387
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.76 E-value=0.057 Score=47.80 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=47.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHH----HHHHhcCCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKN----VKGLLANLP 260 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~g 260 (378)
+++||.|+++++|...++.+...|++++++.+. .+++. +.++..+... .+..+-.+.+. +.++....+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR---DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 589999999999999998888889998876532 22222 2233334332 22222222222 222222233
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
++|++|.++|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06947 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCcc
Confidence 59999999983
No 388
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.74 E-value=0.12 Score=46.89 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=61.7
Q ss_pred ccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCccc
Q 017064 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 248 (378)
Q Consensus 169 ~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~ 248 (378)
.+++.......|....---.|++|+|.|+++-+|...++++...|++|++.-+ ..
T Consensus 139 ~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~----~t--------------------- 193 (283)
T PRK14192 139 GSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS----RT--------------------- 193 (283)
T ss_pred cCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC----Cc---------------------
Confidence 34444333334444333457899999999555999999999999996654431 10
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 249 VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 249 ~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+...+. .+|++|+++|.+.. --.+.++++-.++.+|..
T Consensus 194 -~~L~~~~~---~aDIvI~AtG~~~~-v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 194 -QNLPELVK---QADIIVGAVGKPEL-IKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred -hhHHHHhc---cCCEEEEccCCCCc-CCHHHcCCCCEEEEEEEe
Confidence 01222222 39999999987553 223678999999999844
No 389
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.73 E-value=0.045 Score=49.23 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=28.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~ 221 (378)
.+++|+|+++++|...++.+...|++|+++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~ 33 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH 33 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC
Confidence 47899999999999999999899999998764
No 390
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.71 E-value=0.08 Score=46.65 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=48.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CCc-EEEccCcccHHH----HHHHhcCCCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GAD-EVFTESQLEVKN----VKGLLANLPE 261 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---ga~-~vi~~~~~~~~~----i~~~~~~~g~ 261 (378)
+++||+|++|++|...++.+...|++|+++.+.. .+...+....+ +.. .++..+-.+.+. +.......+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG--NDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc--HHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999988888899999988642 12222222222 221 222222222222 2222222345
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|++|.++|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 391
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.68 E-value=0.14 Score=41.05 Aligned_cols=95 Identities=9% Similarity=0.099 Sum_probs=66.7
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
.+|+.+......+....---.|++|+|+|.+..+|.-.+.++...|++|+.+-.. +.
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~---t~-------------------- 63 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK---TI-------------------- 63 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC---Cc--------------------
Confidence 4555555555556553334568999999999999999999999999998876521 10
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEec
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~ 292 (378)
++.+... ..|+|+-++|.+.+ ---+++++|-.++.+|.
T Consensus 64 ---~l~~~v~---~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~ 101 (140)
T cd05212 64 ---QLQSKVH---DADVVVVGSPKPEK-VPTEWIKPGATVINCSP 101 (140)
T ss_pred ---CHHHHHh---hCCEEEEecCCCCc-cCHHHcCCCCEEEEcCC
Confidence 1111222 39999999998743 22467999999988873
No 392
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.68 E-value=0.039 Score=51.60 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHh----CCCc-EEEccCcccHHHHHHHhcCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~~----~ga~-~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
++.+|||+|++|.+|...++.+...|.+|+++.+.... ...+.+.+.. .+.. ..+..+-.+.+.+.+.....+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~- 83 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK- 83 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC-
Confidence 46789999999999999999999999999998764211 1112222211 1111 122222223344555444433
Q ss_pred CcEEEeCCCC
Q 017064 262 PALGFNCVGG 271 (378)
Q Consensus 262 ~Dvvid~~g~ 271 (378)
+|+||++++.
T Consensus 84 ~d~Vih~A~~ 93 (340)
T PLN02653 84 PDEVYNLAAQ 93 (340)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 393
>PLN02686 cinnamoyl-CoA reductase
Probab=95.67 E-value=0.077 Score=50.27 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=31.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
..+++|||+|++|.+|...+..+...|++|+++++.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~ 86 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT 86 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999999999998899999988753
No 394
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.66 E-value=0.06 Score=47.50 Aligned_cols=79 Identities=11% Similarity=0.049 Sum_probs=47.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCcccH---HH-HHHHhcCCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLEV---KN-VKGLLANLP 260 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~~---~~-i~~~~~~~g 260 (378)
+++||+|++|++|...++.+...|++|+++.+. ++++. ..++..+.. .++..+-.+. +. +.......+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQ---NLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 479999999999999999888889998875432 22222 222334432 2232222222 22 222222234
Q ss_pred CCcEEEeCCCC
Q 017064 261 EPALGFNCVGG 271 (378)
Q Consensus 261 ~~Dvvid~~g~ 271 (378)
++|++|.++|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 59999999985
No 395
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.66 E-value=0.059 Score=50.07 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=47.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHH-HHHhCCC--cEEEccCcccHHHHHHHhcCCCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKE-KLKGLGA--DEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~-~~~~~ga--~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
.|.+|||+|++|.+|...++.+...| .+|+++.+. ..+.. ....+.. -.++..+-.+.+.+.+...+ +
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~---i 75 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD----ELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG---V 75 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC----hhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhc---C
Confidence 36799999999999999998777665 577776643 22222 2222221 12222232344555555543 9
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|+||.++|.
T Consensus 76 D~Vih~Ag~ 84 (324)
T TIGR03589 76 DYVVHAAAL 84 (324)
T ss_pred CEEEECccc
Confidence 999999874
No 396
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.05 Score=55.80 Aligned_cols=79 Identities=22% Similarity=0.307 Sum_probs=49.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EEccCcccHHH----HHHHhcCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKN----VKGLLANL 259 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~ 259 (378)
+++++|+|++|++|...+..+...|++|+++.+. +++.+ .++..|... ++..+-.+.+. +.+.....
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 6789999999999999998888889999999864 33322 223334332 22222222222 22222333
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
|++|++|+++|.
T Consensus 447 g~id~li~~Ag~ 458 (657)
T PRK07201 447 GHVDYLVNNAGR 458 (657)
T ss_pred CCCCEEEECCCC
Confidence 459999999984
No 397
>PLN02928 oxidoreductase family protein
Probab=95.65 E-value=0.06 Score=50.46 Aligned_cols=97 Identities=14% Similarity=0.245 Sum_probs=57.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH--HhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL--KGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~--~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
.|++|+|+|. |.+|+..++.++.+|++|++..+.. ..+....+ ..-....+.+... ....+.++... .|+|
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~ell~~---aDiV 230 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW--TSEPEDGLLIPNGDVDDLVDEKG-GHEDIYEFAGE---ADIV 230 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC--ChhhhhhhccccccccccccccC-cccCHHHHHhh---CCEE
Confidence 4789999999 9999999999999999999876431 11111100 0000000000000 11233444443 7888
Q ss_pred EeCCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064 266 FNCVGGNS-----A-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 266 id~~g~~~-----~-~~~~~~l~~~G~~v~~g 291 (378)
+.++.... + ...+..|+++..+|.++
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 88776321 1 56778888888887776
No 398
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.62 E-value=0.085 Score=44.75 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=58.4
Q ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccHHHHHHHhcCC
Q 017064 185 TLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLANL 259 (378)
Q Consensus 185 ~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~i~~~~~~~ 259 (378)
.+.++++||-.|+ +.|..+..+++.. +++|+++. .+++..+.+ +..+.+. +.....+..++. ..
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD----~s~~~l~~A~~~~~~~~l~~-i~~~~~d~~~~~---~~- 110 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVD----SLGKKIAFLREVAAELGLKN-VTVVHGRAEEFG---QE- 110 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEe----CcHHHHHHHHHHHHHcCCCC-EEEEeccHhhCC---CC-
Confidence 3556899999987 4566666666644 57887776 355444433 3455543 222222222221 12
Q ss_pred CCCcEEEeCCCC---ccHHHHHHhcccCCEEEEEe
Q 017064 260 PEPALGFNCVGG---NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 260 g~~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~g 291 (378)
+.+|+|+..... ..+..+.+.|++||+++.+-
T Consensus 111 ~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 111 EKFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred CCccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 259999965433 23467889999999998874
No 399
>PLN02650 dihydroflavonol-4-reductase
Probab=95.62 E-value=0.086 Score=49.52 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCC---cEEEccCcccHHHHHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA---DEVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga---~~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
..++|||+||+|.+|...+..+...|.+|+++++... ..++...+.. .+. -.++..+-.+.+.+.+...+ +|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~---~d 79 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPA-NVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG---CT 79 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcc-hhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC---CC
Confidence 3568999999999999999999889999999886432 1122211211 121 12222222233345554443 99
Q ss_pred EEEeCCC
Q 017064 264 LGFNCVG 270 (378)
Q Consensus 264 vvid~~g 270 (378)
.||.+++
T Consensus 80 ~ViH~A~ 86 (351)
T PLN02650 80 GVFHVAT 86 (351)
T ss_pred EEEEeCC
Confidence 9999886
No 400
>PLN02214 cinnamoyl-CoA reductase
Probab=95.61 E-value=0.088 Score=49.32 Aligned_cols=79 Identities=16% Similarity=0.264 Sum_probs=50.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CCc-EEEccCcccHHHHHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GAD-EVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---ga~-~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
.+.+|||+|++|.+|...+..+...|.+|+++++... ..+...+..+ +.. .++..+-.+...+.+...+ +|
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d 83 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPD--DPKNTHLRELEGGKERLILCKADLQDYEALKAAIDG---CD 83 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCch--hhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhc---CC
Confidence 5679999999999999999998889999999886421 1111112221 111 2222222233445544443 99
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
+||.+++.
T Consensus 84 ~Vih~A~~ 91 (342)
T PLN02214 84 GVFHTASP 91 (342)
T ss_pred EEEEecCC
Confidence 99999974
No 401
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.29 Score=41.10 Aligned_cols=90 Identities=12% Similarity=0.055 Sum_probs=47.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCC---cEE--EccCcc-cHHH-HHHHhcCCCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGA---DEV--FTESQL-EVKN-VKGLLANLPEP 262 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga---~~v--i~~~~~-~~~~-i~~~~~~~g~~ 262 (378)
+++|+|++| +|...++.+...|++|++..+ ++++.+.+. .++. -.. .|..+. .... +.......|++
T Consensus 2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R----~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIAR----REVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred EEEEECcCH-HHHHHHHHHHHCcCEEEEEEC----CHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 589999975 444456555667999998875 344433332 2321 112 133332 2222 32333333458
Q ss_pred cEEEeCCCCccHHHHHHhcccCC
Q 017064 263 ALGFNCVGGNSASKVLKFLSQGG 285 (378)
Q Consensus 263 Dvvid~~g~~~~~~~~~~l~~~G 285 (378)
|++|+.+=...........+..|
T Consensus 77 d~lv~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 77 DLAVAWIHSSAKDALSVVCRELD 99 (177)
T ss_pred eEEEEeccccchhhHHHHHHHHc
Confidence 99998876654444444444433
No 402
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.60 E-value=0.14 Score=46.73 Aligned_cols=101 Identities=9% Similarity=-0.009 Sum_probs=54.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhC---CCcEEEc-cCcccHHHHHHHhcCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGL---GADEVFT-ESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~---ga~~vi~-~~~~~~~~i~~~~~~~g~ 261 (378)
-.+++++|+|+ |+.|.+++..+...|++ ++++.|.....+...+.++++ +....+. .+-.+.+.+..... .
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---~ 199 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---S 199 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---c
Confidence 35789999999 89999988888888997 666665310002222233333 1111111 11111223333333 3
Q ss_pred CcEEEeCCCCccH------HH-HHHhcccCCEEEEEe
Q 017064 262 PALGFNCVGGNSA------SK-VLKFLSQGGTMVTYG 291 (378)
Q Consensus 262 ~Dvvid~~g~~~~------~~-~~~~l~~~G~~v~~g 291 (378)
.|++|+|+.-... .. ....+.++..++.+-
T Consensus 200 ~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 236 (289)
T PRK12548 200 SDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTV 236 (289)
T ss_pred CCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEec
Confidence 7999999863211 00 134566766666664
No 403
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.59 E-value=0.13 Score=49.00 Aligned_cols=91 Identities=24% Similarity=0.279 Sum_probs=57.5
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHh--CCCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 192 IVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG--LGAD-EVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~--~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
|+|+|+ |.+|..+++.+...+- ++++..+ +.++.+.+.+ .+.. ..+..+-.+.+.+.++..+ .|+||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~dvVi 72 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR----NPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG---CDVVI 72 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEES----SHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT---SSEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC----CHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc---CCEEE
Confidence 789999 9999999999887764 6666663 6666655543 2221 2222222344557777765 79999
Q ss_pred eCCCCccH-HHHHHhcccCCEEEEE
Q 017064 267 NCVGGNSA-SKVLKFLSQGGTMVTY 290 (378)
Q Consensus 267 d~~g~~~~-~~~~~~l~~~G~~v~~ 290 (378)
+|+|.... .-+-.|+..|-.++..
T Consensus 73 n~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 73 NCAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp E-SSGGGHHHHHHHHHHHT-EEEES
T ss_pred ECCccchhHHHHHHHHHhCCCeecc
Confidence 99998644 4455778888888873
No 404
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.58 E-value=0.057 Score=44.14 Aligned_cols=83 Identities=19% Similarity=0.250 Sum_probs=59.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc----cHH-HHHHHhcCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVK-NVKGLLANLPE 261 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~----~~~-~i~~~~~~~g~ 261 (378)
.+|-.-||+|+++++|.+++..+...|+.|+...-+ +..-.+.++++|-..++..-+. ++. .+.+.-..+|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp---~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgr 83 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLP---QSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGR 83 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCC---cccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence 345667999999999999999999999998877643 3334567889999888865442 221 12223344456
Q ss_pred CcEEEeCCCCc
Q 017064 262 PALGFNCVGGN 272 (378)
Q Consensus 262 ~Dvvid~~g~~ 272 (378)
.|+.++|+|..
T Consensus 84 ld~~vncagia 94 (260)
T KOG1199|consen 84 LDALVNCAGIA 94 (260)
T ss_pred eeeeeecccee
Confidence 99999999964
No 405
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.57 E-value=0.048 Score=46.73 Aligned_cols=96 Identities=11% Similarity=0.104 Sum_probs=57.0
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcCC
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANL 259 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~~ 259 (378)
....++.+||-.|+ +.|..+..+|+. |.+|+++. .+++..+.++ ..+...+ .....+ +....-.
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD----~S~~~i~~a~~~~~~~~~~~v-~~~~~d---~~~~~~~- 93 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWD----KNPMSIANLERIKAAENLDNL-HTAVVD---LNNLTFD- 93 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEe----CCHHHHHHHHHHHHHcCCCcc-eEEecC---hhhCCcC-
Confidence 44566789999997 457788888875 88888886 3555444443 2332211 111111 1111111
Q ss_pred CCCcEEEeCCCC---------ccHHHHHHhcccCCEEEEEe
Q 017064 260 PEPALGFNCVGG---------NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 260 g~~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~g 291 (378)
+.+|+|+.+..- ..+....+.|++||.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 249999976541 12367788999999976554
No 406
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.56 E-value=0.048 Score=48.94 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=31.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.++++||+|++|++|...++.+...|++|+.+.+.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999999998899999988753
No 407
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.55 E-value=0.14 Score=44.48 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=65.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC---CcH-------------HHH----HHHHhCCCcEEEccCccc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---GSD-------------EAK----EKLKGLGADEVFTESQLE 248 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~---~~~-------------~~~----~~~~~~ga~~vi~~~~~~ 248 (378)
..+|+|.|. |++|.+++..+...|+.-+.++|-+. ++- .|. ++.+.+....-+...+..
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 378999999 99999999999999997777765432 111 111 222333333333333222
Q ss_pred --HHHHHHHhcCCCCCcEEEeCCCCccHH--HHHHhcccCCEEEEEecCCC
Q 017064 249 --VKNVKGLLANLPEPALGFNCVGGNSAS--KVLKFLSQGGTMVTYGGMSK 295 (378)
Q Consensus 249 --~~~i~~~~~~~g~~Dvvid~~g~~~~~--~~~~~l~~~G~~v~~g~~~~ 295 (378)
.+.+..++.. ++|.||||..+-... .+..|.+.+=.+|..++..+
T Consensus 109 ~t~en~~~~~~~--~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 109 ITEENLEDLLSK--GFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hCHhHHHHHhcC--CCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 2456666666 499999999875543 33456666667777765543
No 408
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=95.54 E-value=0.11 Score=48.42 Aligned_cols=80 Identities=9% Similarity=0.071 Sum_probs=48.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEccCcccHHHHHHHhcCCCCCcEEEeC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALGFNC 268 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~i~~~~~~~g~~Dvvid~ 268 (378)
+|||+|++|.+|...+..+...|.+|+++.+...........+.+++.. ..+..+-.+.+.+.+.....+ +|+||++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d~vvh~ 80 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA-IDTVIHF 80 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC-CCEEEEC
Confidence 5899999999999999888888999998764321122222222232211 223223233344555443333 9999999
Q ss_pred CCC
Q 017064 269 VGG 271 (378)
Q Consensus 269 ~g~ 271 (378)
++.
T Consensus 81 a~~ 83 (338)
T PRK10675 81 AGL 83 (338)
T ss_pred Ccc
Confidence 874
No 409
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.52 E-value=0.1 Score=47.28 Aligned_cols=60 Identities=22% Similarity=0.392 Sum_probs=52.1
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 245 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~ 245 (378)
+.++||+ .+|=+.+|..|.+.+.+|+++|.+++++.... .+.+|++.++.+|+..++...
T Consensus 57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~-~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPET-MSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEcCC
Confidence 6799998 56778889999999999999999999988654 689999999999999887554
No 410
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.52 E-value=0.36 Score=41.45 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=52.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
-.|.+|+|.|. |.+|..+++.+...|++|+++. .+.++.+.+. .+|+.. ++.. ++ ... .+|++
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D----~~~~~~~~~~~~~g~~~-v~~~-----~l---~~~--~~Dv~ 89 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVAD----INEEAVARAAELFGATV-VAPE-----EI---YSV--DADVF 89 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHcCCEE-Ecch-----hh---ccc--cCCEE
Confidence 35789999999 8999999999999999999654 3556555554 456543 2221 11 111 38888
Q ss_pred EeCCCCccH-HHHHHhcc
Q 017064 266 FNCVGGNSA-SKVLKFLS 282 (378)
Q Consensus 266 id~~g~~~~-~~~~~~l~ 282 (378)
+.|+....+ ...+..++
T Consensus 90 vp~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 90 APCALGGVINDDTIPQLK 107 (200)
T ss_pred EecccccccCHHHHHHcC
Confidence 877655443 44555554
No 411
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.50 E-value=0.25 Score=42.62 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=70.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|..|||.|+ |.+|.-=+.+....|++|+++... ..++-..+..+.+ ...+. +..+.+.+ . .+++||-
T Consensus 11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~--~~~el~~~~~~~~-i~~~~-~~~~~~~~----~---~~~lvia 78 (210)
T COG1648 11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPE--FEPELKALIEEGK-IKWIE-REFDAEDL----D---DAFLVIA 78 (210)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCC--ccHHHHHHHHhcC-cchhh-cccChhhh----c---CceEEEE
Confidence 4689999999 999999999999999999998854 1233333333333 11121 11111111 1 2889999
Q ss_pred CCCCccHH-HHHHhcccCCEEEEEecCCCCCccccchhhh-hcCceEEEEec
Q 017064 268 CVGGNSAS-KVLKFLSQGGTMVTYGGMSKKPITVSTSAFI-FKDLSLKGFWL 317 (378)
Q Consensus 268 ~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~ 317 (378)
+++.+..+ ......++.+.+|.+...... .++.....+ ...+.+.-+..
T Consensus 79 At~d~~ln~~i~~~a~~~~i~vNv~D~p~~-~~f~~Pa~~~r~~l~iaIsT~ 129 (210)
T COG1648 79 ATDDEELNERIAKAARERRILVNVVDDPEL-CDFIFPAIVDRGPLQIAISTG 129 (210)
T ss_pred eCCCHHHHHHHHHHHHHhCCceeccCCccc-CceecceeeccCCeEEEEECC
Confidence 99987774 555666777888877643332 233333332 33455544443
No 412
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.49 E-value=0.15 Score=46.28 Aligned_cols=96 Identities=21% Similarity=0.247 Sum_probs=69.5
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++..++..|....---.|++|.|.|.++.+|.-.+.++...|++|++.-+. +.
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~---t~------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR---ST------------------- 194 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC---CC-------------------
Confidence 45677777777777664334568999999998899999999999999999877432 10
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~ 293 (378)
.+.+.+. ..|+||-++|.+.+ ... ++++|..+|.+|..
T Consensus 195 ----~l~e~~~---~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin 233 (301)
T PRK14194 195 ----DAKALCR---QADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN 233 (301)
T ss_pred ----CHHHHHh---cCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence 1222222 38999999998654 333 38999999999843
No 413
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.47 E-value=0.068 Score=50.01 Aligned_cols=81 Identities=14% Similarity=0.220 Sum_probs=50.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHH-hC----CC-cEEEccCcccHHHHHHHhcCCCCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLK-GL----GA-DEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-~~~~~~~~~-~~----ga-~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
++|||+||+|.+|...++.+...|.+|+++.+.... ..++...+. .. +. -.++..+-.+.+.+.+...+.+ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK-P 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC-C
Confidence 479999999999999999999999999998865211 112222111 11 11 1122222223345555555433 8
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|+||.+++.
T Consensus 80 d~ViH~Aa~ 88 (343)
T TIGR01472 80 TEIYNLAAQ 88 (343)
T ss_pred CEEEECCcc
Confidence 999999974
No 414
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.47 E-value=0.071 Score=43.82 Aligned_cols=97 Identities=18% Similarity=0.294 Sum_probs=59.7
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+|+++...+..|....---.|++|+|.|.+..+|.-...++...|++|+..-.. +
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~---T-------------------- 70 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK---T-------------------- 70 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT---S--------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCC---C--------------------
Confidence 45566666666666653334678999999998899999999999999998864311 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.+.+. ..|+||-++|.+.+- --++++++-.++.+|..
T Consensus 71 ---~~l~~~~~---~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 71 ---KNLQEITR---RADIVVSAVGKPNLI-KADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ---SSHHHHHT---TSSEEEE-SSSTT-B--GGGS-TTEEEEE--CE
T ss_pred ---Ccccceee---eccEEeeeecccccc-ccccccCCcEEEecCCc
Confidence 11223333 399999999987652 13578999999988843
No 415
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.087 Score=46.58 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=47.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEccCcccHHH----HHHHhcCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKN----VKGLLANL 259 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~~-vi~~~~~~~~~----i~~~~~~~ 259 (378)
+.++||+|++|++|...++.+...|++|+.+.+. .+++. +.++..+... .+..+-.+.+. +.......
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR---NRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC---CHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 4689999999999999988888889998766532 22222 2233344432 22222222222 22222223
Q ss_pred CCCcEEEeCCCC
Q 017064 260 PEPALGFNCVGG 271 (378)
Q Consensus 260 g~~Dvvid~~g~ 271 (378)
+.+|++|.++|.
T Consensus 79 ~~id~li~~ag~ 90 (248)
T PRK06123 79 GRLDALVNNAGI 90 (248)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 416
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.41 E-value=0.15 Score=41.55 Aligned_cols=95 Identities=18% Similarity=0.146 Sum_probs=57.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHH-HHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPAL 264 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~-~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv 264 (378)
..+.+++|.|+ |.+|...++.+...| .+++++.+ +.++. +..++++... +.....+ ..+... ++|+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r----~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~---~~Dv 84 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR----TLEKAKALAERFGELG-IAIAYLD---LEELLA---EADL 84 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC----CHHHHHHHHHHHhhcc-cceeecc---hhhccc---cCCE
Confidence 45689999998 999999998888886 45666553 34443 3445555431 0001111 111122 4999
Q ss_pred EEeCCCCccH-----HHHHHhcccCCEEEEEecC
Q 017064 265 GFNCVGGNSA-----SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 265 vid~~g~~~~-----~~~~~~l~~~G~~v~~g~~ 293 (378)
||.|++.... ......++++..++.++..
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9999987542 1223456788888877643
No 417
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.38 E-value=0.14 Score=46.67 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=68.7
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++..++..|....---.|++|+|+|.++.+|.-.+.++...|++|++.-.. +.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~r---T~------------------- 193 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSR---TR------------------- 193 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCC---CC-------------------
Confidence 45677777777767653323569999999988999999999999899998876311 11
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~ 293 (378)
+ +.+.+. ..|+||-++|.+.+ ... ++++|..++.+|..
T Consensus 194 -~---l~e~~~---~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin 232 (296)
T PRK14188 194 -D---LPAVCR---RADILVAAVGRPEMVKGD--WIKPGATVIDVGIN 232 (296)
T ss_pred -C---HHHHHh---cCCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence 0 122222 38999999998664 333 38999999999854
No 418
>PLN02427 UDP-apiose/xylose synthase
Probab=95.37 E-value=0.098 Score=49.87 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=48.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCC------cEEEccCcccHHHHHHHhcCCC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLP 260 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~ga------~~vi~~~~~~~~~i~~~~~~~g 260 (378)
+..+|||+||+|.+|...++.+... |.+|+++.+. .++...+...+. -.++..+-.+.+.+.+...+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~----~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-- 86 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY----NDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM-- 86 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC----chhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc--
Confidence 3468999999999999999888777 5888888743 333333332221 12222222233455555543
Q ss_pred CCcEEEeCCC
Q 017064 261 EPALGFNCVG 270 (378)
Q Consensus 261 ~~Dvvid~~g 270 (378)
+|+||.+++
T Consensus 87 -~d~ViHlAa 95 (386)
T PLN02427 87 -ADLTINLAA 95 (386)
T ss_pred -CCEEEEccc
Confidence 999999997
No 419
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=95.33 E-value=0.046 Score=49.70 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=54.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCC--------------------CcHHHHHHHHhCCCcEEEccCcc--
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--------------------GSDEAKEKLKGLGADEVFTESQL-- 247 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~ga~~vi~~~~~-- 247 (378)
.+|||.|+ |++|-=|+|.+.+.|+.-++++|-+. ......+.++++.-..-++....
T Consensus 67 s~VLVVGa-GGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~~L 145 (427)
T KOG2017|consen 67 SSVLVVGA-GGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNEFL 145 (427)
T ss_pred ccEEEEcc-CCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechhhc
Confidence 68999999 99999999999999999898886532 01112334455554444433332
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccH
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSA 274 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~ 274 (378)
+.+....+..+ +|+|+||+.+...
T Consensus 146 ~~sNa~~Ii~~---YdvVlDCTDN~~T 169 (427)
T KOG2017|consen 146 SSSNAFDIIKQ---YDVVLDCTDNVPT 169 (427)
T ss_pred cchhHHHHhhc---cceEEEcCCCccc
Confidence 22445555554 9999999998653
No 420
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=95.33 E-value=0.095 Score=49.26 Aligned_cols=80 Identities=6% Similarity=0.125 Sum_probs=47.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC--CCc-EEEccCcccHHHHHHHhcCCCCCcEEE
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGF 266 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~--ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvi 266 (378)
.+|||+|++|.+|...++.+...|.+++++.+... ...+...+... +.. .++..+-.+.+.+.+...+.+ +|+||
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~D~Vi 79 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQ-PDCVM 79 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc-cccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcC-CCEEE
Confidence 37999999999999999999999988776664321 11111111111 111 122222223345555554433 99999
Q ss_pred eCCCC
Q 017064 267 NCVGG 271 (378)
Q Consensus 267 d~~g~ 271 (378)
+++|.
T Consensus 80 h~A~~ 84 (355)
T PRK10217 80 HLAAE 84 (355)
T ss_pred ECCcc
Confidence 99974
No 421
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.31 E-value=0.08 Score=48.62 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=45.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCC---CcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 191 SIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~g---a~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
+|+|+|++|.+|...++.+...| .+|+++.+.. ...+.+.+..+. -..++..+-.+.+.+.+...+.. +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLT--YAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQ-PDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCC--cchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcC-CCEE
Confidence 48999999999999999777666 6777665321 111112222211 11233223233445555554433 9999
Q ss_pred EeCCCC
Q 017064 266 FNCVGG 271 (378)
Q Consensus 266 id~~g~ 271 (378)
|++++.
T Consensus 78 i~~a~~ 83 (317)
T TIGR01181 78 VHFAAE 83 (317)
T ss_pred EEcccc
Confidence 999984
No 422
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.30 E-value=0.17 Score=45.65 Aligned_cols=96 Identities=15% Similarity=0.190 Sum_probs=70.2
Q ss_pred hhccccHHHHHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccC
Q 017064 167 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 245 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~ 245 (378)
...||++...+..+.. -++ -.|++|+|.|.+..+|.-.+.++...||+|++.-.. +
T Consensus 142 ~~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~---T------------------- 198 (287)
T PRK14176 142 GLVPCTPHGVIRALEE-YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF---T------------------- 198 (287)
T ss_pred CCCCCcHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc---C-------------------
Confidence 4567777777777765 343 479999999998889999999999999998655411 0
Q ss_pred cccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 246 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 246 ~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.+.+. ..|++|.++|.+.+- --+++++|-.++.+|..
T Consensus 199 ----~~l~~~~~---~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 199 ----DDLKKYTL---DADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred ----CCHHHHHh---hCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 01233333 399999999987652 24589999999999953
No 423
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.30 E-value=0.14 Score=46.22 Aligned_cols=79 Identities=24% Similarity=0.292 Sum_probs=57.0
Q ss_pred CCCCEEEEeCCCchHHHHHH-HHHHHcCCcEEEEecCCCCcHHHHHHHH-----hCCCc---EEEccCccc--HHHHHHH
Q 017064 187 NSGDSIVQNGATSIVGQCII-QIARHRGIHSINIIRDRAGSDEAKEKLK-----GLGAD---EVFTESQLE--VKNVKGL 255 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av-~la~~~g~~vi~~~~~~~~~~~~~~~~~-----~~ga~---~vi~~~~~~--~~~i~~~ 255 (378)
+-|++.+|.|++.++|.+-+ ++|+ +|.+|+.+.| +++|++..+ ..++. .++|....+ -+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsR----t~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISR----TQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeC----CHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence 44789999999999997665 5555 9999999996 677765542 34422 234555444 4678888
Q ss_pred hcCCCCCcEEEeCCCC
Q 017064 256 LANLPEPALGFNCVGG 271 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~ 271 (378)
+.+.. +-+.++|+|.
T Consensus 122 l~~~~-VgILVNNvG~ 136 (312)
T KOG1014|consen 122 LAGLD-VGILVNNVGM 136 (312)
T ss_pred hcCCc-eEEEEecccc
Confidence 88765 8899999995
No 424
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.29 E-value=0.057 Score=47.27 Aligned_cols=76 Identities=20% Similarity=0.266 Sum_probs=49.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCCC
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g~ 271 (378)
|||+||+|-+|...+..+...|..|+.+.+... .+.... .......+ ..+-.+.+.+.++..... +|.||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~--~~~~~~-~~~~~~~~-~~dl~~~~~~~~~~~~~~-~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN--SESFEE-KKLNVEFV-IGDLTDKEQLEKLLEKAN-IDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST--GGHHHH-HHTTEEEE-ESETTSHHHHHHHHHHHT-ESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccc--cccccc-ccceEEEE-EeeccccccccccccccC-ceEEEEeecc
Confidence 799999999999999999999999998886532 111111 11222222 122223445555544433 8999999986
Q ss_pred c
Q 017064 272 N 272 (378)
Q Consensus 272 ~ 272 (378)
.
T Consensus 76 ~ 76 (236)
T PF01370_consen 76 S 76 (236)
T ss_dssp S
T ss_pred c
Confidence 3
No 425
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.26 E-value=0.079 Score=51.92 Aligned_cols=81 Identities=17% Similarity=0.182 Sum_probs=55.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-----------------cHHHHHHHHhCCCcEEEccCcccHH
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-----------------SDEAKEKLKGLGADEVFTESQLEVK 250 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ga~~vi~~~~~~~~ 250 (378)
.+++|+|.|+ |+.|+.++..++..|.+|++..+.... .....++++++|.+..++..-...-
T Consensus 140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 5789999999 999999999999999998777533110 0134567788998876654321100
Q ss_pred HHHHHhcCCCCCcEEEeCCCCc
Q 017064 251 NVKGLLANLPEPALGFNCVGGN 272 (378)
Q Consensus 251 ~i~~~~~~~g~~Dvvid~~g~~ 272 (378)
.+..... ++|.||.++|..
T Consensus 219 ~~~~~~~---~~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLLE---DYDAVFLGVGTY 237 (467)
T ss_pred CHHHHHh---cCCEEEEEeCCC
Confidence 1122222 399999999974
No 426
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.26 E-value=0.15 Score=45.09 Aligned_cols=85 Identities=13% Similarity=0.187 Sum_probs=52.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH----------------HH----HHHHHhCCCcEEEccCcc--
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD----------------EA----KEKLKGLGADEVFTESQL-- 247 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~----------------~~----~~~~~~~ga~~vi~~~~~-- 247 (378)
.+|+|.|+ |++|..+++.+...|..-+.++|.+.-.. .| .+.++++..+.-+.....
T Consensus 25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 78999999 99999999999999998888776532111 01 123334443322222211
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccHHHHH
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSASKVL 278 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~ 278 (378)
+.+.+.++..+ +|+||||..+......+
T Consensus 104 ~~~~~~~~~~~---~DlVvd~~D~~~~r~~l 131 (240)
T TIGR02355 104 DDAELAALIAE---HDIVVDCTDNVEVRNQL 131 (240)
T ss_pred CHHHHHHHhhc---CCEEEEcCCCHHHHHHH
Confidence 11234444443 99999999987664433
No 427
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.25 E-value=0.057 Score=49.15 Aligned_cols=145 Identities=19% Similarity=0.309 Sum_probs=76.7
Q ss_pred CCCCCEEeeCCCCCcccccceeccCCceEEcCCCCCHhhhhhccccHHH--HHHHHHHHhccCCCCEEEEeCCCchHHHH
Q 017064 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQC 204 (378)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~g~~VlV~g~~g~~G~~ 204 (378)
+++|++.+..+. |.+|-.-+....+.+.+++.|=.. ....| +...|.+. ..+|++||=.|+ |.|.+
T Consensus 108 ~~vg~~~~I~P~----w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lcl~~l~~~--~~~g~~vLDvG~--GSGIL 175 (295)
T PF06325_consen 108 IRVGDRLVIVPS----WEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLCLELLEKY--VKPGKRVLDVGC--GSGIL 175 (295)
T ss_dssp EEECTTEEEEET----T----SSTTSEEEEESTTSSS-SS----HCHHHHHHHHHHHHH--SSTTSEEEEES---TTSHH
T ss_pred EEECCcEEEECC----CcccCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHHh--ccCCCEEEEeCC--cHHHH
Confidence 556886666543 555533345667778777653322 12233 34444442 678899999886 55666
Q ss_pred HHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EE-EccCcccHHHHHHHhcCCCCCcEEEeCCCCccH----HHH
Q 017064 205 IIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EV-FTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----SKV 277 (378)
Q Consensus 205 av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~-~v-i~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~----~~~ 277 (378)
++..+| +|++-+..+|.++.. +..++.++..|.. .+ +....... . +++|+|+-+.-.+.+ ...
T Consensus 176 aiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~-------~--~~~dlvvANI~~~vL~~l~~~~ 245 (295)
T PF06325_consen 176 AIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV-------E--GKFDLVVANILADVLLELAPDI 245 (295)
T ss_dssp HHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC-------C--S-EEEEEEES-HHHHHHHHHHC
T ss_pred HHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc-------c--ccCCEEEECCCHHHHHHHHHHH
Confidence 665555 588655555543211 1122233333432 22 21111110 1 259999988776554 455
Q ss_pred HHhcccCCEEEEEecC
Q 017064 278 LKFLSQGGTMVTYGGM 293 (378)
Q Consensus 278 ~~~l~~~G~~v~~g~~ 293 (378)
.++++++|.+++.|-.
T Consensus 246 ~~~l~~~G~lIlSGIl 261 (295)
T PF06325_consen 246 ASLLKPGGYLILSGIL 261 (295)
T ss_dssp HHHEEEEEEEEEEEEE
T ss_pred HHhhCCCCEEEEcccc
Confidence 6889999999998844
No 428
>PRK08328 hypothetical protein; Provisional
Probab=95.25 E-value=0.22 Score=43.75 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=57.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcH-----------------HHH----HHHHhCCCcEEEccCcc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-----------------EAK----EKLKGLGADEVFTESQL 247 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~-----------------~~~----~~~~~~ga~~vi~~~~~ 247 (378)
+.+|+|.|+ |++|..++..+...|..-+.++|.+.-.. .|. +.++++..+..++....
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~ 105 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG 105 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence 378999999 99999999999999998777776432010 111 12334443333322211
Q ss_pred --cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHH--hcccCCEEEE
Q 017064 248 --EVKNVKGLLANLPEPALGFNCVGGNSASKVLK--FLSQGGTMVT 289 (378)
Q Consensus 248 --~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~--~l~~~G~~v~ 289 (378)
..+.+.++..+ +|+||||+.+......+. +.+.+=-++.
T Consensus 106 ~~~~~~~~~~l~~---~D~Vid~~d~~~~r~~l~~~~~~~~ip~i~ 148 (231)
T PRK08328 106 RLSEENIDEVLKG---VDVIVDCLDNFETRYLLDDYAHKKGIPLVH 148 (231)
T ss_pred cCCHHHHHHHHhc---CCEEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence 12334444443 999999999865544444 4444433443
No 429
>PLN02583 cinnamoyl-CoA reductase
Probab=95.22 E-value=0.19 Score=46.07 Aligned_cols=79 Identities=20% Similarity=0.310 Sum_probs=48.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CC-cEEEccCcccHHHHHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GA-DEVFTESQLEVKNVKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---ga-~~vi~~~~~~~~~i~~~~~~~g~~D 263 (378)
++.+|||+|++|.+|...++.+...|.+|++++|... ..+..+.+..+ +. -.++..+-.+.+.+.....+ .|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~---~d 80 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNG-ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKG---CS 80 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCch-hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcC---CC
Confidence 4678999999999999999999999999999886421 11222223332 11 12232232333445554443 88
Q ss_pred EEEeCCC
Q 017064 264 LGFNCVG 270 (378)
Q Consensus 264 vvid~~g 270 (378)
.|+.+.+
T Consensus 81 ~v~~~~~ 87 (297)
T PLN02583 81 GLFCCFD 87 (297)
T ss_pred EEEEeCc
Confidence 8886554
No 430
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.22 E-value=0.22 Score=42.06 Aligned_cols=114 Identities=12% Similarity=0.206 Sum_probs=74.9
Q ss_pred hhccccHHHHHHHHHHHhcc----------CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC
Q 017064 167 ATIIVNPLTALRMLEDFTTL----------NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL 236 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~----------~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ 236 (378)
..+||++..++..|.. .++ -.|++|+|.|.+..+|.=...++...||+|++.-.. +.- .....
T Consensus 31 ~~~PCTp~avi~lL~~-~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~--~~~----~~~~~ 103 (197)
T cd01079 31 SILPCTPLAIVKILEF-LGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN--GIQ----VFTRG 103 (197)
T ss_pred CccCCCHHHHHHHHHH-hCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC--ccc----ccccc
Confidence 4567777777777765 333 568999999999999999999999999999865211 000 00000
Q ss_pred CCcEEEccCc---ccH-HHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 237 GADEVFTESQ---LEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 237 ga~~vi~~~~---~~~-~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
+- +.... .+. ..+.+.+.. .|+||-++|.+.+.---+++++|-.+|.+|..
T Consensus 104 ~~---~~hs~t~~~~~~~~l~~~~~~---ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 104 ES---IRHEKHHVTDEEAMTLDCLSQ---SDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred cc---cccccccccchhhHHHHHhhh---CCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 10 01111 111 124444443 99999999998763346889999999999843
No 431
>PLN03139 formate dehydrogenase; Provisional
Probab=95.21 E-value=0.095 Score=49.65 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|++|.|+|. |.+|+..++.++.+|++|++..+. ....+...+.|+... ..+.++... .|+|+.
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~----~~~~~~~~~~g~~~~--------~~l~ell~~---sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRL----KMDPELEKETGAKFE--------EDLDAMLPK---CDVVVI 261 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCC----CcchhhHhhcCceec--------CCHHHHHhh---CCEEEE
Confidence 4789999998 999999999999999999876532 111122233443221 112233322 677766
Q ss_pred CCCCcc-H-----HHHHHhcccCCEEEEEe
Q 017064 268 CVGGNS-A-----SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~-~-----~~~~~~l~~~G~~v~~g 291 (378)
++.... . ...+..|+++..+|.++
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence 665321 1 34566677766666665
No 432
>PRK07574 formate dehydrogenase; Provisional
Probab=95.20 E-value=0.11 Score=49.12 Aligned_cols=88 Identities=16% Similarity=0.139 Sum_probs=54.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|.+|.|+|. |.+|+..++.++.+|++|++..+.. ...+....+|+... ..+.++... .|+|+.
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~----~~~~~~~~~g~~~~--------~~l~ell~~---aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR----LPEEVEQELGLTYH--------VSFDSLVSV---CDVVTI 254 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC----CchhhHhhcCceec--------CCHHHHhhc---CCEEEE
Confidence 4679999999 9999999999999999999887532 11122223443211 112223322 677776
Q ss_pred CCCCcc-H-----HHHHHhcccCCEEEEEe
Q 017064 268 CVGGNS-A-----SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~-~-----~~~~~~l~~~G~~v~~g 291 (378)
+..... . ...+..|+++..+|.++
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence 665321 1 34566677776666655
No 433
>PLN03075 nicotianamine synthase; Provisional
Probab=95.18 E-value=0.11 Score=47.08 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=63.8
Q ss_pred HHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhC-----CCcEEEccCcccH
Q 017064 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL-----GADEVFTESQLEV 249 (378)
Q Consensus 177 ~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~-----ga~~vi~~~~~~~ 249 (378)
+..+...... ++++|+-.|+ |+.|+.++.+++.+. .+++.+. .+++..+.+++. |...-+.....+.
T Consensus 113 ~~~L~~~~~~-~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD----~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da 186 (296)
T PLN03075 113 FDLLSQHVNG-VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFD----IDPSANDVARRLVSSDPDLSKRMFFHTADV 186 (296)
T ss_pred HHHHHHhhcC-CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHhhhccCccCCcEEEECch
Confidence 3344443333 7799999998 999999998887553 4566665 466666666542 2222122222222
Q ss_pred HHHHHHhcCCCCCcEEEeCCC------C--ccHHHHHHhcccCCEEEEEe
Q 017064 250 KNVKGLLANLPEPALGFNCVG------G--NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 250 ~~i~~~~~~~g~~Dvvid~~g------~--~~~~~~~~~l~~~G~~v~~g 291 (378)
.+ .....++||+||-.+- . ..+....+.|++||.++.-.
T Consensus 187 ~~---~~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 187 MD---VTESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred hh---cccccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 22 2222235999998752 1 22478889999999987654
No 434
>PLN00016 RNA-binding protein; Provisional
Probab=95.16 E-value=0.17 Score=48.16 Aligned_cols=99 Identities=12% Similarity=0.171 Sum_probs=61.5
Q ss_pred CCEEEEe----CCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHH--------HHHHHhCCCcEEEccCcccHHHHHHHh
Q 017064 189 GDSIVQN----GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------KEKLKGLGADEVFTESQLEVKNVKGLL 256 (378)
Q Consensus 189 g~~VlV~----g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~--------~~~~~~~ga~~vi~~~~~~~~~i~~~~ 256 (378)
..+|||+ |++|.+|...+..+...|.+|++++|.... ..+ ...+...|...+. .+ ..++.+..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~v~~v~-~D---~~d~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVW-GD---PADVKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc-hhhhccCchhhhhHhhhcCceEEE-ec---HHHHHhhh
Confidence 3689999 999999999999888889999999975321 111 1112233444332 12 12233333
Q ss_pred cCCCCCcEEEeCCCCcc--HHHHHHhcccC--CEEEEEecC
Q 017064 257 ANLPEPALGFNCVGGNS--ASKVLKFLSQG--GTMVTYGGM 293 (378)
Q Consensus 257 ~~~g~~Dvvid~~g~~~--~~~~~~~l~~~--G~~v~~g~~ 293 (378)
...+ +|+||++.+... ....++.++.. .++|+++..
T Consensus 127 ~~~~-~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 127 AGAG-FDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred ccCC-ccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 3333 999999987643 34556655533 378887743
No 435
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.16 E-value=0.23 Score=45.00 Aligned_cols=93 Identities=23% Similarity=0.172 Sum_probs=57.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCcccHHHHHHHhcCCCCCcE
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPAL 264 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dv 264 (378)
..+.+++|+|+ |++|.+++..++..| .+|+++.| +.++.+.+ ..++....+.. .. ....... .+|+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R----~~~~a~~l~~~~~~~~~~~~-~~---~~~~~~~---~~Di 188 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNR----TVERAEELAKLFGALGKAEL-DL---ELQEELA---DFDL 188 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhhhccceee-cc---cchhccc---cCCE
Confidence 45678999998 999999999999999 57777764 44444333 34432110111 00 1111112 4999
Q ss_pred EEeCCCCccH------HHHHHhcccCCEEEEEe
Q 017064 265 GFNCVGGNSA------SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 265 vid~~g~~~~------~~~~~~l~~~G~~v~~g 291 (378)
||+|+..... ......++++..++.+-
T Consensus 189 vInaTp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 189 IINATSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred EEECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 9999975432 12346777777777775
No 436
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.15 E-value=0.17 Score=45.12 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=29.2
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.++++||+|+++ ++|...+..+...|++|+++.+.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 357899999984 89999888887889999988754
No 437
>PRK07069 short chain dehydrogenase; Validated
Probab=95.15 E-value=0.074 Score=47.08 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=27.9
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
++|+|++|++|...++.+...|++|+++.+.
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999998888889999988864
No 438
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.15 E-value=0.26 Score=44.45 Aligned_cols=97 Identities=19% Similarity=0.264 Sum_probs=70.4
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++...+..|....---.|++|+|.|.+..+|.=...++...|++|++.-.. +
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~---t-------------------- 192 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK---T-------------------- 192 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC---c--------------------
Confidence 35677777777777653323578999999999999999999999999998864310 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.+.+. ..|+||-++|.+.+ ---+++++|..++.+|..
T Consensus 193 ---~~l~~~~~---~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 193 ---KNLAELTK---QADILIVAVGKPKL-ITADMVKEGAVVIDVGVN 232 (284)
T ss_pred ---hhHHHHHH---hCCEEEEecCCCCc-CCHHHcCCCCEEEEeecc
Confidence 11223333 39999999998775 224678999999999844
No 439
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.13 E-value=0.098 Score=45.84 Aligned_cols=80 Identities=21% Similarity=0.227 Sum_probs=47.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EEccCcccHHHHHHH----hcCCCCCcEE
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTESQLEVKNVKGL----LANLPEPALG 265 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~ga~~-vi~~~~~~~~~i~~~----~~~~g~~Dvv 265 (378)
+||+|++|++|...++.+...|++|+++.+..... .+..+.+++.|... .+..+-.+...+.+. ....+++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999998888899998887642111 11122334445432 222222222222221 1222359999
Q ss_pred EeCCCC
Q 017064 266 FNCVGG 271 (378)
Q Consensus 266 id~~g~ 271 (378)
|.++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 999985
No 440
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.11 E-value=0.2 Score=45.02 Aligned_cols=96 Identities=15% Similarity=0.229 Sum_probs=70.1
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
.+||++..++..|....---.|++|+|.|.+..+|.=...++...||+|++.- + +..
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~ch-----s------------------~T~ 193 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICH-----S------------------KTK 193 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeC-----C------------------CCC
Confidence 56777777777776633335689999999999999999999999999886543 1 011
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
.+...+.. .|++|-++|.+.+ ---+++++|-.+|.+|-.
T Consensus 194 ---~l~~~~~~---ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin 232 (278)
T PRK14172 194 ---NLKEVCKK---ADILVVAIGRPKF-IDEEYVKEGAIVIDVGTS 232 (278)
T ss_pred ---CHHHHHhh---CCEEEEcCCCcCc-cCHHHcCCCcEEEEeecc
Confidence 12333332 9999999998776 224679999999999843
No 441
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.11 E-value=0.2 Score=45.19 Aligned_cols=97 Identities=13% Similarity=0.217 Sum_probs=71.0
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++..++..|....---.|++|+|.|.+..+|.=...++...||+|++.-. +.
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs-----------------------~T 193 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHS-----------------------KT 193 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-----------------------CC
Confidence 3567777767766665433457899999999999999999999999998875431 11
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+...+. ..|++|-++|.+.+- --+++++|-.++.+|..
T Consensus 194 ~---~l~~~~~---~ADIvIsAvGk~~~i-~~~~ik~gavVIDvGin 233 (284)
T PRK14177 194 Q---NLPSIVR---QADIIVGAVGKPEFI-KADWISEGAVLLDAGYN 233 (284)
T ss_pred C---CHHHHHh---hCCEEEEeCCCcCcc-CHHHcCCCCEEEEecCc
Confidence 1 1233333 399999999987762 25789999999999953
No 442
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.08 E-value=0.11 Score=47.36 Aligned_cols=60 Identities=23% Similarity=0.324 Sum_probs=52.8
Q ss_pred HhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEc
Q 017064 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT 243 (378)
Q Consensus 183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~ 243 (378)
.+.+.||.++||-.-+|..|...+.++..+|+++|++.... -+.||+..++.+|+.-+..
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~-ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEK-MSKEKRILLRALGAEIILT 156 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechh-hhHHHHHHHHHcCCEEEec
Confidence 36799999999999999999999999999999999988443 5778999999999987763
No 443
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.06 E-value=0.19 Score=43.25 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=28.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
+.+|+|.|+ |++|...++.+...|..-+.++|.
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~ 53 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDD 53 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecC
Confidence 378999999 999999999999999976666655
No 444
>PLN02476 O-methyltransferase
Probab=95.05 E-value=0.18 Score=45.44 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=65.3
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccH-HHH
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEV-KNV 252 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~-~~i 252 (378)
+..+.+....++||=.|. ..|..++.+|+.++ .+++.+. .+++..+.+ +..|..+-+.....+. +.+
T Consensus 110 L~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE----~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L 183 (278)
T PLN02476 110 LAMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACE----RDSNSLEVAKRYYELAGVSHKVNVKHGLAAESL 183 (278)
T ss_pred HHHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 444566777899999984 88999999998774 4555555 355555444 4577653333222222 223
Q ss_pred HHHhc--CCCCCcEEEeCCCCc----cHHHHHHhcccCCEEEEE
Q 017064 253 KGLLA--NLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTY 290 (378)
Q Consensus 253 ~~~~~--~~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~~ 290 (378)
.++.. ..+.||.||--+... .+..+++.+++||.++.=
T Consensus 184 ~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 184 KSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred HHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 33321 113599998655542 347789999999998753
No 445
>PRK14967 putative methyltransferase; Provisional
Probab=95.05 E-value=0.34 Score=42.33 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=57.3
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcC
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLAN 258 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~ 258 (378)
..+.++++||-.|+ |. |..+..+++. ++ +++++. .+++..+.++ ..+....+... +... ....
T Consensus 32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD----~s~~~l~~a~~n~~~~~~~~~~~~~--d~~~---~~~~ 99 (223)
T PRK14967 32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVD----ISRRAVRSARLNALLAGVDVDVRRG--DWAR---AVEF 99 (223)
T ss_pred cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEE----CCHHHHHHHHHHHHHhCCeeEEEEC--chhh---hccC
Confidence 45788999999998 54 8888888875 55 666665 3555554443 34443222111 1111 1122
Q ss_pred CCCCcEEEeCCCCc----------------------------cHHHHHHhcccCCEEEEEe
Q 017064 259 LPEPALGFNCVGGN----------------------------SASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 259 ~g~~Dvvid~~g~~----------------------------~~~~~~~~l~~~G~~v~~g 291 (378)
+.||+|+.+..-. .+..+.+.|++||+++.+.
T Consensus 100 -~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 100 -RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred -CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2499999763210 1246788999999998764
No 446
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.04 E-value=0.21 Score=44.94 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=71.5
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
+.+||++...+..|....---.|++|+|.|.+..+|.=.+.++...||+|++.-.. +
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~---T-------------------- 192 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---T-------------------- 192 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC---C--------------------
Confidence 45677777777777664434569999999999999999999999999998654311 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+.+.+. ..|++|-++|.+.+-. -+++++|-.++.+|..
T Consensus 193 ~---dl~~~~k---~ADIvIsAvGkp~~i~-~~~vk~gavVIDvGin 232 (282)
T PRK14180 193 T---DLKSHTT---KADILIVAVGKPNFIT-ADMVKEGAVVIDVGIN 232 (282)
T ss_pred C---CHHHHhh---hcCEEEEccCCcCcCC-HHHcCCCcEEEEeccc
Confidence 0 1222233 3999999999877622 3789999999999843
No 447
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.00 E-value=0.12 Score=48.22 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=30.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~ 221 (378)
.|++|.|.|. |.+|...++.++.+|++|++..+
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~ 181 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSR 181 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC
Confidence 4789999999 99999999999999999987764
No 448
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.00 E-value=0.32 Score=41.54 Aligned_cols=101 Identities=19% Similarity=0.187 Sum_probs=58.0
Q ss_pred HHHHhccCCCCEEEEeCCCchHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHH----hCCCcE--EEccCcccHHHH
Q 017064 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKNV 252 (378)
Q Consensus 180 l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~ga~~--vi~~~~~~~~~i 252 (378)
+.....+.++++||=.|+ +.|..++.+++.. +.+|+++. .+++..+.++ .++.+. ++..+.. +.+
T Consensus 32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD----~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~ 103 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIE----RDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECL 103 (196)
T ss_pred HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHhCCCCeEEEECchH--HHH
Confidence 344467788898887775 5566777777654 56777776 3555555443 355443 2222211 112
Q ss_pred HHHhcCCCCCcEEEeCCCC---ccHHHHHHhcccCCEEEEEe
Q 017064 253 KGLLANLPEPALGFNCVGG---NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~g 291 (378)
..+.. .+|.++-..+. ..++.+.+.|++||+++...
T Consensus 104 ~~~~~---~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 104 AQLAP---APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred hhCCC---CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 12211 24554433332 23478889999999998775
No 449
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.98 E-value=0.1 Score=44.96 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=65.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-CcEEE--ccCccc---H-HHHHHHhcCCCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADEVF--TESQLE---V-KNVKGLLANLPE 261 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-a~~vi--~~~~~~---~-~~i~~~~~~~g~ 261 (378)
|++++++|+.|++|+.....+...|+++.++.+..+ +.+....++... ...++ -++-.. . +..++.....|.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~E-n~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEE-NPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhh-CHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 899999999999999999888899999999885432 233333333322 22221 222111 1 223444444456
Q ss_pred CcEEEeCCCCcc---H---------------HHHHHhc-----ccCCEEEEEecCCC
Q 017064 262 PALGFNCVGGNS---A---------------SKVLKFL-----SQGGTMVTYGGMSK 295 (378)
Q Consensus 262 ~Dvvid~~g~~~---~---------------~~~~~~l-----~~~G~~v~~g~~~~ 295 (378)
.|+.|+.+|-.. . ..++..+ .+||-+|.+++..+
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence 999999998421 1 2233333 37899999986554
No 450
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.96 E-value=0.22 Score=43.23 Aligned_cols=99 Identities=14% Similarity=0.082 Sum_probs=60.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE---------ccCc-c-cHHHHHH
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF---------TESQ-L-EVKNVKG 254 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi---------~~~~-~-~~~~i~~ 254 (378)
.++.+||+.|+ |.|.-++.+|. .|.+|+++. .++...+.+ .+.|..... ...+ . ...++..
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD----~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 105 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVE----LSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA 105 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEe----CCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC
Confidence 57789999997 77888888885 699999988 467666654 233322110 0000 0 0111211
Q ss_pred Hhc-CCCCCcEEEeCCCC---------ccHHHHHHhcccCCEEEEEec
Q 017064 255 LLA-NLPEPALGFNCVGG---------NSASKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 255 ~~~-~~g~~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 292 (378)
+.. ..+.+|.|+|+..- ..++...++|+|||++++.+.
T Consensus 106 ~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 106 LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 111 01249999997652 123678899999999777763
No 451
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.94 E-value=0.24 Score=44.59 Aligned_cols=97 Identities=16% Similarity=0.213 Sum_probs=70.5
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++...+..|....---.|++|+|.|.+..+|.=...++...|++|++.-.. +
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~---T-------------------- 190 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK---T-------------------- 190 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC---C--------------------
Confidence 35677777777667653333578999999999999999999999999988755311 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+...+. ..|+||-++|.+.+ ---+++++|-.++.+|..
T Consensus 191 ~---~l~~~~~---~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin 230 (282)
T PRK14169 191 R---NLKQLTK---EADILVVAVGVPHF-IGADAVKPGAVVIDVGIS 230 (282)
T ss_pred C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCcEEEEeecc
Confidence 0 1223333 29999999998776 224689999999999944
No 452
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.92 E-value=0.08 Score=47.22 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=51.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+|||.||+|- |...+..+...|.+|+++++ ++...+.+...|...+... ..+.+.+.++....+ +|+|||++.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~----t~~~~~~~~~~g~~~v~~g-~l~~~~l~~~l~~~~-i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVT----TSEGKHLYPIHQALTVHTG-ALDPQELREFLKRHS-IDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEc----cCCccccccccCCceEEEC-CCCHHHHHHHHHhcC-CCEEEEcCC
Confidence 6999999665 99888777778999999985 4444445555665555422 233345666665544 999999887
Q ss_pred C
Q 017064 271 G 271 (378)
Q Consensus 271 ~ 271 (378)
.
T Consensus 75 P 75 (256)
T TIGR00715 75 P 75 (256)
T ss_pred H
Confidence 5
No 453
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.91 E-value=0.32 Score=44.58 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=29.8
Q ss_pred CCCEEEEeCCC--chHHHHHHHHHHHcCCcEEEEe
Q 017064 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINII 220 (378)
Q Consensus 188 ~g~~VlV~g~~--g~~G~~av~la~~~g~~vi~~~ 220 (378)
.|+++||+|++ .++|.+.+..+...|++|++..
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 57899999995 7999999999999999999854
No 454
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.91 E-value=0.83 Score=39.77 Aligned_cols=116 Identities=6% Similarity=-0.107 Sum_probs=67.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.+.+|||.|| |.++.-=+..+...|++|+++... -+++-.++. ..|.-..+ ........+ . ++++||-
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~--i~~el~~l~-~~~~i~~~-~r~~~~~dl----~---g~~LVia 91 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKK--FSKEFLDLK-KYGNLKLI-KGNYDKEFI----K---DKHLIVI 91 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC--CCHHHHHHH-hCCCEEEE-eCCCChHHh----C---CCcEEEE
Confidence 4679999999 999988888888899999888743 233333332 23332222 112111222 2 3999999
Q ss_pred CCCCccHHHHHHhcc-cCCEEEEEecCCCCCccccchhhhhc-CceEEEEe
Q 017064 268 CVGGNSASKVLKFLS-QGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFW 316 (378)
Q Consensus 268 ~~g~~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 316 (378)
|++.+..+..+...+ ..+.++.....+. ..++-.+.++.+ ++++.-+.
T Consensus 92 ATdD~~vN~~I~~~a~~~~~lvn~vd~p~-~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 92 ATDDEKLNNKIRKHCDRLYKLYIDCSDYK-KGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEcCCcc-cCeEEeeeEEecCCEEEEEEC
Confidence 999888865554444 4466666653322 233333334433 45554443
No 455
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=94.91 E-value=0.15 Score=43.25 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=54.9
Q ss_pred HhccCCCCEEEEeCCCchHHHHHHHHHHHc-C-CcEEEEecCCCCcHHHHHHHHhCCCcEEE-ccCccc-HHHHHHHhcC
Q 017064 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR-G-IHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLE-VKNVKGLLAN 258 (378)
Q Consensus 183 ~~~~~~g~~VlV~g~~g~~G~~av~la~~~-g-~~vi~~~~~~~~~~~~~~~~~~~ga~~vi-~~~~~~-~~~i~~~~~~ 258 (378)
...+++|++||..|+ |.-+. +..+++.. + .+++++.. ++++ ...+...+. +..+.. .+.+.+.+++
T Consensus 27 ~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDi----s~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~ 96 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDL----QPMK----PIENVDFIRGDFTDEEVLNKIRERVGD 96 (188)
T ss_pred hcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEec----cccc----cCCCceEEEeeCCChhHHHHHHHHhCC
Confidence 345789999999998 44444 44455443 3 46666652 3322 112333221 222211 2344444544
Q ss_pred CCCCcEEEeCC-----CC-------------ccHHHHHHhcccCCEEEEEe
Q 017064 259 LPEPALGFNCV-----GG-------------NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 259 ~g~~Dvvid~~-----g~-------------~~~~~~~~~l~~~G~~v~~g 291 (378)
. ++|+|+... |. ..+..+.++|++||+++...
T Consensus 97 ~-~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 97 D-KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred C-CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 3 499999532 21 12356789999999998754
No 456
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.89 E-value=0.34 Score=43.58 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=69.9
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+|+++...+..|....---.|.+|+|.|.+..+|.-...++...|++|++.-. ..
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs----~t------------------- 186 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS----KT------------------- 186 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec----Ch-------------------
Confidence 3567777777777766333356899999999889999999999999999887652 11
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.+.+. ..|++|.++|.+.+ ---+++++|..++.+|..
T Consensus 187 ---~~L~~~~~---~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 187 ---ENLKAELR---QADILVSAAGKAGF-ITPDMVKPGATVIDVGIN 226 (279)
T ss_pred ---hHHHHHHh---hCCEEEECCCcccc-cCHHHcCCCcEEEEeecc
Confidence 12233333 39999999996644 112457999999999944
No 457
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.86 E-value=0.26 Score=44.45 Aligned_cols=95 Identities=17% Similarity=0.296 Sum_probs=68.5
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
.+||++..+...|....---.|++|.|.|.++.+|.-.+.++...|++|++.- .. ++
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~-s~--t~-------------------- 193 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH-SR--TR-------------------- 193 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC-CC--CC--------------------
Confidence 56777777776676533335789999999999999999999999999987652 11 10
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecC
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~ 293 (378)
+ +.+.+. ..|+||-++|.+.+ .. .++++|-.+|.+|..
T Consensus 194 ~---l~~~~~---~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin 232 (284)
T PRK14179 194 N---LAEVAR---KADILVVAIGRGHFVTK--EFVKEGAVVIDVGMN 232 (284)
T ss_pred C---HHHHHh---hCCEEEEecCccccCCH--HHccCCcEEEEecce
Confidence 1 222222 39999999998765 33 349999999999844
No 458
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.86 E-value=0.14 Score=44.82 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.+++++|+|+++++|...+..+...|++|+++.+.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45799999999999999998888889999888753
No 459
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.85 E-value=0.26 Score=43.18 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=61.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV 269 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~ 269 (378)
.++|.|+ |.+|...++.+...|..|+++. .++++.+. +.+--..+++..+..+...+++.--. .+|+++-++
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id----~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t 74 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLID----RDEERVEEFLADELDTHVVIGDATDEDVLEEAGID--DADAVVAAT 74 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEE----cCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCC--cCCEEEEee
Confidence 5889999 9999999999999999999998 46777665 33233445565666665566665222 599999999
Q ss_pred CCccHHHHHHhcc
Q 017064 270 GGNSASKVLKFLS 282 (378)
Q Consensus 270 g~~~~~~~~~~l~ 282 (378)
|.+..+..+-.++
T Consensus 75 ~~d~~N~i~~~la 87 (225)
T COG0569 75 GNDEVNSVLALLA 87 (225)
T ss_pred CCCHHHHHHHHHH
Confidence 9987655444333
No 460
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=94.83 E-value=0.68 Score=41.15 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEec
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~ 221 (378)
-+|.+|+|.|- |.+|+.+++++...|++|++++|
T Consensus 36 l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGS-GNVAQYAAEKLLELGAKVVTLSD 69 (254)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 35789999999 99999999999999999999886
No 461
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.13 Score=45.07 Aligned_cols=73 Identities=21% Similarity=0.242 Sum_probs=47.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE--ccCcc-cHHH-HHHHhcCCCCCc
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQL-EVKN-VKGLLANLPEPA 263 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi--~~~~~-~~~~-i~~~~~~~g~~D 263 (378)
.++++||.|++|++|...++.+...|++|+++.+... + .... .++ |..+. ...+ +.+.....+ +|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~----~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~-~d 70 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI----D-----DFPG-ELFACDLADIEQTAATLAQINEIHP-VD 70 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc----c-----ccCc-eEEEeeCCCHHHHHHHHHHHHHhCC-Cc
Confidence 3578999999999999999998889999999886421 1 1111 222 22221 1222 333333333 89
Q ss_pred EEEeCCCC
Q 017064 264 LGFNCVGG 271 (378)
Q Consensus 264 vvid~~g~ 271 (378)
++|.++|.
T Consensus 71 ~vi~~ag~ 78 (234)
T PRK07577 71 AIVNNVGI 78 (234)
T ss_pred EEEECCCC
Confidence 99999985
No 462
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.81 E-value=0.21 Score=43.92 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=66.0
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHH
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGL 255 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g-~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~ 255 (378)
.....+.+|++||=++ +|.|..|..+++..| ++|+++. -++.-++.++ +.|... +..-..+++.+-
T Consensus 44 i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D----~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-- 114 (238)
T COG2226 44 ISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLD----ISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-- 114 (238)
T ss_pred HHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEE----CCHHHHHHHHHHhhccCccc-eEEEEechhhCC--
Confidence 3345566899988876 488999999999887 4666665 3555555443 344332 211122222221
Q ss_pred hcCCCCCcEEEeCCCCc-------cHHHHHHhcccCCEEEEEecCC
Q 017064 256 LANLPEPALGFNCVGGN-------SASKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~ 294 (378)
..+. .||+|..+.|-. .+.+..+.|+|||+++.+....
T Consensus 115 f~D~-sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 115 FPDN-SFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred CCCC-ccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 2222 499999888832 2367889999999999988543
No 463
>PLN02244 tocopherol O-methyltransferase
Probab=94.79 E-value=0.085 Score=49.39 Aligned_cols=96 Identities=16% Similarity=0.192 Sum_probs=59.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
.++++||=.|+ +.|..+..+++..|++|+++. .++...+.++ ..|...-+.....+...+ .. .. +.|
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD----~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~-~~-~~-~~F 187 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGIT----LSPVQAARANALAAAQGLSDKVSFQVADALNQ-PF-ED-GQF 187 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEEcCcccC-CC-CC-CCc
Confidence 67899998887 567788889988899999887 3555544443 333321011111111111 01 11 259
Q ss_pred cEEEeCCCCc-------cHHHHHHhcccCCEEEEEe
Q 017064 263 ALGFNCVGGN-------SASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 263 Dvvid~~g~~-------~~~~~~~~l~~~G~~v~~g 291 (378)
|+|+...... .++...+.|+|||+++...
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9998654421 2367889999999998865
No 464
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.79 E-value=0.04 Score=43.34 Aligned_cols=97 Identities=12% Similarity=0.183 Sum_probs=52.4
Q ss_pred EEEEeCCCchHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCC
Q 017064 191 SIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV 269 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~ 269 (378)
+|+|+|++|-+|...++.+.. .+.++.++++...+.....+.-.-.|... ..-.-...+.+.... +|++||++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~---~~~~v~~~l~~~~~~---~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGP---LGVPVTDDLEELLEE---ADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST----SSBEBS-HHHHTTH----SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCC---cccccchhHHHhccc---CCEEEEcC
Confidence 589999999999999999987 68888888764321111111111111110 000001234444433 89999999
Q ss_pred CCccHHHHHHhcccCCEEEEEecC
Q 017064 270 GGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 270 g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.....++.....|.-+.+|.+
T Consensus 76 ~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 76 NPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred ChHHhHHHHHHHHhCCCCEEEECC
Confidence 665555555444445666667644
No 465
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.78 E-value=0.2 Score=45.18 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=67.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~ga~-~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.+|.|.|+ |.+|.-++.+|.-+|++|++.. -+.+|+..+.. ++.+ +.+-++ ...+.+... +.|++|.
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild----~n~~rl~~ldd~f~~rv~~~~st---~~~iee~v~---~aDlvIg 237 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILD----LNIDRLRQLDDLFGGRVHTLYST---PSNIEEAVK---KADLVIG 237 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEe----cCHHHHhhhhHhhCceeEEEEcC---HHHHHHHhh---hccEEEE
Confidence 35778888 9999999999999999999988 47778777765 4443 222222 233444433 3899998
Q ss_pred CCC---C--c--cHHHHHHhcccCCEEEEEecCCC
Q 017064 268 CVG---G--N--SASKVLKFLSQGGTMVTYGGMSK 295 (378)
Q Consensus 268 ~~g---~--~--~~~~~~~~l~~~G~~v~~g~~~~ 295 (378)
++= . + ..++.+..|+||+.+|.+.-..+
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 653 1 2 13677899999999999984444
No 466
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.78 E-value=0.24 Score=43.15 Aligned_cols=92 Identities=18% Similarity=0.163 Sum_probs=60.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEccCcccHHHHHHHhcCCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEP 262 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~i~~~~~~~g~~ 262 (378)
-+|.+||=.||+| |+++.-+|+ .|++|+++. -+++-.+.++ +-|.. +++.....+++.... +.|
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD----~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~---~~F 125 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGID----ASEKPIEVAKLHALESGVN--IDYRQATVEDLASAG---GQF 125 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEec----CChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcC---CCc
Confidence 4788999999855 465555555 479999987 4566555554 33433 556665555544432 369
Q ss_pred cEEEe-----CCCCcc--HHHHHHhcccCCEEEEE
Q 017064 263 ALGFN-----CVGGNS--ASKVLKFLSQGGTMVTY 290 (378)
Q Consensus 263 Dvvid-----~~g~~~--~~~~~~~l~~~G~~v~~ 290 (378)
|+|+. -+..+. +..+.++++|+|.+++.
T Consensus 126 DvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 126 DVVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred cEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 99985 333332 36788999999998754
No 467
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.76 E-value=0.18 Score=45.03 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=28.9
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCcEEEEe
Q 017064 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINII 220 (378)
Q Consensus 188 ~g~~VlV~g~~g--~~G~~av~la~~~g~~vi~~~ 220 (378)
+|+++||+|+++ ++|...+..+...|++|+++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 578999999974 899999988889999998874
No 468
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.75 E-value=0.22 Score=45.24 Aligned_cols=93 Identities=15% Similarity=0.094 Sum_probs=53.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCC----CcEEEccCcccHHHHHHHhcCCCC
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLG----ADEVFTESQLEVKNVKGLLANLPE 261 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g----a~~vi~~~~~~~~~i~~~~~~~g~ 261 (378)
..+++|+|.|+ |+.|.+++..+...|++.+.+++. +.+|.+ ++++++ ...+... +.+..... .
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR---~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~~---~ 192 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDV---DPARAAALADELNARFPAARATAG-----SDLAAALA---A 192 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHHHHhhCCCeEEEec-----cchHhhhC---C
Confidence 34689999999 999999999999999854555432 344433 333332 1122111 11222222 3
Q ss_pred CcEEEeCCCCcc-----HHHHHHhcccCCEEEEEe
Q 017064 262 PALGFNCVGGNS-----ASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 262 ~Dvvid~~g~~~-----~~~~~~~l~~~G~~v~~g 291 (378)
+|+||+|+.... ..-....++++..++.+-
T Consensus 193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 999999964211 111124566666666554
No 469
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.73 E-value=0.2 Score=46.81 Aligned_cols=84 Identities=14% Similarity=0.193 Sum_probs=51.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc------------------HHH----HHHHHhCCCcEEEccCc
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS------------------DEA----KEKLKGLGADEVFTESQ 246 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~------------------~~~----~~~~~~~ga~~vi~~~~ 246 (378)
+.+|+|.|+ |++|..++..+...|...+.++|.+.-. ..| .+.++++..+.-+....
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 368999999 9999999999999999777776653200 012 13344444333222211
Q ss_pred --ccHHHHHHHhcCCCCCcEEEeCCCCccHHH
Q 017064 247 --LEVKNVKGLLANLPEPALGFNCVGGNSASK 276 (378)
Q Consensus 247 --~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~ 276 (378)
...+.+..+..+ +|+||||+.+.....
T Consensus 103 ~~~~~~~~~~~~~~---~DlVid~~D~~~~r~ 131 (338)
T PRK12475 103 TDVTVEELEELVKE---VDLIIDATDNFDTRL 131 (338)
T ss_pred ccCCHHHHHHHhcC---CCEEEEcCCCHHHHH
Confidence 122344455443 999999998765533
No 470
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.71 E-value=0.31 Score=43.87 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=69.1
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++...+..|....---.|++|+|.|.+..+|.=.+.++...||+|+ ++... +
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt-i~hs~--T-------------------- 191 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVD-ICHIF--T-------------------- 191 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE-EeCCC--C--------------------
Confidence 356777776766666533235689999999988999999999999999886 44211 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+.+.+. ..|+++-++|.+.+ ---+++++|-.++.+|..
T Consensus 192 ~---~l~~~~~---~ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin 231 (281)
T PRK14183 192 K---DLKAHTK---KADIVIVGVGKPNL-ITEDMVKEGAIVIDIGIN 231 (281)
T ss_pred c---CHHHHHh---hCCEEEEecCcccc-cCHHHcCCCcEEEEeecc
Confidence 0 1222233 39999999998776 224789999999999943
No 471
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.71 E-value=0.27 Score=44.30 Aligned_cols=96 Identities=14% Similarity=0.166 Sum_probs=69.8
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
.+||++...+..|....---.|++|+|.|.+..+|.=...++...|++|++.-.. + .
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~---T--------------------~ 192 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR---T--------------------K 192 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---C--------------------C
Confidence 5677777777777653333568999999999999999999999999988754311 1 1
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
.+.+.+. ..|++|-++|.+.+ ---+++++|-.++.+|..
T Consensus 193 ---~l~~~~~---~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin 231 (284)
T PRK14170 193 ---DLPQVAK---EADILVVATGLAKF-VKKDYIKPGAIVIDVGMD 231 (284)
T ss_pred ---CHHHHHh---hCCEEEEecCCcCc-cCHHHcCCCCEEEEccCc
Confidence 1222333 29999999998776 224789999999999844
No 472
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.70 E-value=0.12 Score=52.72 Aligned_cols=81 Identities=17% Similarity=0.110 Sum_probs=55.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCC-----------------cHHHHHHHHhCCCcEEEccCcccHH
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-----------------SDEAKEKLKGLGADEVFTESQLEVK 250 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ga~~vi~~~~~~~~ 250 (378)
.+++|+|.|+ |+.|+.++..++..|.+|++..+.... ...+.++++++|.+..++..-....
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 4899999999 999999999999999998877643210 0124567788998877665321101
Q ss_pred HHHHHhcCCCCCcEEEeCCCCc
Q 017064 251 NVKGLLANLPEPALGFNCVGGN 272 (378)
Q Consensus 251 ~i~~~~~~~g~~Dvvid~~g~~ 272 (378)
.+..+.. .+|.||.++|..
T Consensus 388 ~~~~l~~---~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTS---EYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHh---cCCEEEEeCCCC
Confidence 1222222 399999999964
No 473
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=94.68 E-value=0.22 Score=44.13 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=31.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecC
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~ 222 (378)
.++++||+|+++++|...+..+...|++++++.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~ 38 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARR 38 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 46899999999999999998888999998888865
No 474
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.66 E-value=0.27 Score=44.40 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=69.8
Q ss_pred hccccHHHHHHHHHHHhcc-CCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 168 TIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~-~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
.+||++...+..|.. .++ -.|++|+|.|.+..+|.=...++...|++|++.-.. +
T Consensus 134 ~~PcTp~avi~lL~~-~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~---T-------------------- 189 (287)
T PRK14173 134 LEPCTPAGVVRLLKH-YGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK---T-------------------- 189 (287)
T ss_pred CCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC---C--------------------
Confidence 567777777766765 343 468999999999999999999999999988754311 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+...+. ..|+||-++|.+.+- --+++++|-.++.+|..
T Consensus 190 ~---~l~~~~~---~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin 229 (287)
T PRK14173 190 Q---DLPAVTR---RADVLVVAVGRPHLI-TPEMVRPGAVVVDVGIN 229 (287)
T ss_pred C---CHHHHHh---hCCEEEEecCCcCcc-CHHHcCCCCEEEEccCc
Confidence 1 1223333 299999999987663 35788999999999844
No 475
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.65 E-value=0.29 Score=44.29 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=70.7
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
+.+||++...+..|....---.|++|+|.|.+..+|.=...++...+++|++.-.. +
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~---T-------------------- 194 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA---T-------------------- 194 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC---C--------------------
Confidence 45677777777777664334568999999999999999999999999998754311 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+...+. ..|++|-++|.+.+ ---+++++|-.+|.+|-.
T Consensus 195 ~---~l~~~~~---~ADIvVsAvGkp~~-i~~~~ik~gaiVIDVGin 234 (294)
T PRK14187 195 R---DLADYCS---KADILVAAVGIPNF-VKYSWIKKGAIVIDVGIN 234 (294)
T ss_pred C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEeccc
Confidence 1 1223333 29999999998776 224688999999999843
No 476
>PRK08317 hypothetical protein; Provisional
Probab=94.65 E-value=0.15 Score=44.62 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=61.5
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhC----CC-cEEEccCcccHHHHH
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL----GA-DEVFTESQLEVKNVK 253 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~i~ 253 (378)
.....+.++++||-.|+ |. |..+..+++..+ .+++++. .+++..+.+++. +. ..++..+. ...
T Consensus 12 ~~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d----~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~- 81 (241)
T PRK08317 12 FELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGID----RSEAMLALAKERAAGLGPNVEFVRGDA---DGL- 81 (241)
T ss_pred HHHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEe----CCHHHHHHHHHHhhCCCCceEEEeccc---ccC-
Confidence 34567889999999998 43 889999998874 5677666 356655655543 11 11111111 110
Q ss_pred HHhcCCCCCcEEEeCCC-----C--ccHHHHHHhcccCCEEEEEe
Q 017064 254 GLLANLPEPALGFNCVG-----G--NSASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 254 ~~~~~~g~~Dvvid~~g-----~--~~~~~~~~~l~~~G~~v~~g 291 (378)
.... +.+|+|+.... . ..+....++|+++|.++...
T Consensus 82 ~~~~--~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 82 PFPD--GSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCC--CCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 0111 24999886432 1 23477889999999998775
No 477
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=94.61 E-value=0.11 Score=47.18 Aligned_cols=60 Identities=17% Similarity=0.236 Sum_probs=43.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+|||+|++|.+|...++.+...|.+|+++.+. ..|. .+.+.+.+...+.. +|+||++++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~--~~~~~~~~~~~~~~-~d~vi~~a~ 59 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDL--TDPEALERLLRAIR-PDAVVNTAA 59 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCC--CCHHHHHHHHHhCC-CCEEEECCc
Confidence 48999999999999999998889999888742 0111 12344555554433 799999987
Q ss_pred C
Q 017064 271 G 271 (378)
Q Consensus 271 ~ 271 (378)
.
T Consensus 60 ~ 60 (287)
T TIGR01214 60 Y 60 (287)
T ss_pred c
Confidence 4
No 478
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.58 E-value=1 Score=44.81 Aligned_cols=86 Identities=19% Similarity=0.181 Sum_probs=54.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|++|.|+|. |.+|...++.++.+|++|++..+.. +.+ ...+.|+..+ .+.++.. ..|+|+.
T Consensus 139 ~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~--~~~---~~~~~g~~~~---------~l~ell~---~aDiV~l 200 (526)
T PRK13581 139 YGKTLGIIGL-GRIGSEVAKRAKAFGMKVIAYDPYI--SPE---RAAQLGVELV---------SLDELLA---RADFITL 200 (526)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC--Chh---HHHhcCCEEE---------cHHHHHh---hCCEEEE
Confidence 4789999999 9999999999999999998876421 222 2234454332 1222222 2677776
Q ss_pred CCCCcc-----H-HHHHHhcccCCEEEEEe
Q 017064 268 CVGGNS-----A-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~-----~-~~~~~~l~~~G~~v~~g 291 (378)
++.... + ...+..|+++..+|.++
T Consensus 201 ~lP~t~~t~~li~~~~l~~mk~ga~lIN~a 230 (526)
T PRK13581 201 HTPLTPETRGLIGAEELAKMKPGVRIINCA 230 (526)
T ss_pred ccCCChHhhcCcCHHHHhcCCCCeEEEECC
Confidence 665421 1 45566677776666665
No 479
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.57 E-value=0.15 Score=42.40 Aligned_cols=94 Identities=17% Similarity=0.275 Sum_probs=61.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+|.|.|++|-+|...++-|+.+|-.|++++| ++.|....+ ...++.-+-.+...+.+... ++|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR----n~~K~~~~~---~~~i~q~Difd~~~~a~~l~---g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVR----NASKLAARQ---GVTILQKDIFDLTSLASDLA---GHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEe----ChHhccccc---cceeecccccChhhhHhhhc---CCceEEEecc
Confidence 5789999999999999999999999999996 555543321 11222222223334444444 3999999998
Q ss_pred CccH----------HHHHHhcccC--CEEEEEecCC
Q 017064 271 GNSA----------SKVLKFLSQG--GTMVTYGGMS 294 (378)
Q Consensus 271 ~~~~----------~~~~~~l~~~--G~~v~~g~~~ 294 (378)
.... +..+..++.- -|+..+|+..
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 6411 2345666653 3777777543
No 480
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.57 E-value=0.37 Score=43.49 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=57.6
Q ss_pred HHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHH-HHHhCCCcEEEccCcccHHHH
Q 017064 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNV 252 (378)
Q Consensus 175 ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~i 252 (378)
..+.+|.+ .....+++++|+|+ |+.+.+++..++..|++ ++++.| +.++.+ +++.++... . ..+
T Consensus 109 Gf~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR----~~~~a~~la~~~~~~~----~----~~~ 174 (272)
T PRK12550 109 AIAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVAR----NEKTGKALAELYGYEW----R----PDL 174 (272)
T ss_pred HHHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC----CHHHHHHHHHHhCCcc----h----hhc
Confidence 34445544 34455679999999 99999999999889986 655554 344443 344454211 0 011
Q ss_pred HHHhcCCCCCcEEEeCCCCccH--------HHHHHhcccCCEEEEEe
Q 017064 253 KGLLANLPEPALGFNCVGGNSA--------SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 253 ~~~~~~~g~~Dvvid~~g~~~~--------~~~~~~l~~~G~~v~~g 291 (378)
... .+|+||+|+..... .-....+++...++.+-
T Consensus 175 ----~~~-~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~v 216 (272)
T PRK12550 175 ----GGI-EADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVV 216 (272)
T ss_pred ----ccc-cCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEee
Confidence 011 38999999863221 01234566666666554
No 481
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.53 E-value=0.31 Score=43.29 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=29.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (378)
Q Consensus 189 g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~ 223 (378)
..+|+|.|+ |++|..++..+...|..-+.++|.+
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 378999999 9999999999999999877777653
No 482
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.51 E-value=0.34 Score=42.98 Aligned_cols=103 Identities=10% Similarity=0.073 Sum_probs=63.7
Q ss_pred HHHhccCCCCEEEEeCCCchHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEccCcccH-HHHH
Q 017064 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEV-KNVK 253 (378)
Q Consensus 181 ~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~ga~~vi~~~~~~~-~~i~ 253 (378)
..+.+....++||=.| ..+|+.++.+|+.+ +.+++.+.. .++..+.+ +..|...-+.....+. +.+.
T Consensus 72 ~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~----~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~ 145 (247)
T PLN02589 72 NMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDI----NRENYELGLPVIQKAGVAHKIDFREGPALPVLD 145 (247)
T ss_pred HHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeC----CHHHHHHHHHHHHHCCCCCceEEEeccHHHHHH
Confidence 3345555667899998 58899999999876 457766663 44444444 5567443333332232 3344
Q ss_pred HHhcC---CCCCcEEEeCCCCc----cHHHHHHhcccCCEEEE
Q 017064 254 GLLAN---LPEPALGFNCVGGN----SASKVLKFLSQGGTMVT 289 (378)
Q Consensus 254 ~~~~~---~g~~Dvvid~~g~~----~~~~~~~~l~~~G~~v~ 289 (378)
++... .+.||.||--+.-. .+..+++++++||.++.
T Consensus 146 ~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 146 QMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred HHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 43321 13599998555432 34678899999999764
No 483
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=94.50 E-value=0.18 Score=46.79 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=29.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCCcEEEEec
Q 017064 188 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIR 221 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~-~~g~~vi~~~~ 221 (378)
.|+++.|+|. |.+|+..++.++ .+|++|++..+
T Consensus 144 ~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~ 177 (323)
T PRK15409 144 HHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNAR 177 (323)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECC
Confidence 4689999999 999999999998 99999987653
No 484
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.50 E-value=0.35 Score=43.56 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=70.7
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++..++..|....---.|++|+|.|.+..+|.=...++...+++|++.=.. +
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~---T-------------------- 191 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---T-------------------- 191 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---C--------------------
Confidence 45677777777777663333579999999999999999999999899998754310 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+...+.. .|++|-++|.+.+- --+++++|-.++.+|-.
T Consensus 192 ~---nl~~~~~~---ADIvIsAvGkp~~i-~~~~vk~GavVIDvGin 231 (282)
T PRK14166 192 K---DLSLYTRQ---ADLIIVAAGCVNLL-RSDMVKEGVIVVDVGIN 231 (282)
T ss_pred C---CHHHHHhh---CCEEEEcCCCcCcc-CHHHcCCCCEEEEeccc
Confidence 1 13333332 99999999987762 23689999999999943
No 485
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=94.49 E-value=0.1 Score=45.38 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=60.9
Q ss_pred hccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEccCc-------c----cHHH
Q 017064 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQ-------L----EVKN 251 (378)
Q Consensus 184 ~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~ga~~vi~~~~-------~----~~~~ 251 (378)
....++.+|||.|+ |-|+-+..||. .|.+|+++. -++...+.+ ++.+....+.... . ...+
T Consensus 33 l~~~~~~rvLvPgC--G~g~D~~~La~-~G~~VvGvD----ls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD 105 (218)
T PF05724_consen 33 LALKPGGRVLVPGC--GKGYDMLWLAE-QGHDVVGVD----LSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGD 105 (218)
T ss_dssp HTTSTSEEEEETTT--TTSCHHHHHHH-TTEEEEEEE----S-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-
T ss_pred cCCCCCCeEEEeCC--CChHHHHHHHH-CCCeEEEEe----cCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcc
Confidence 55788889999997 55666777776 499999987 577777766 3444322211110 0 0012
Q ss_pred HHHHhcC-CCCCcEEEeCCCCcc---------HHHHHHhcccCCEEEEEe
Q 017064 252 VKGLLAN-LPEPALGFNCVGGNS---------ASKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 252 i~~~~~~-~g~~Dvvid~~g~~~---------~~~~~~~l~~~G~~v~~g 291 (378)
+-.+... .|+||.|+|++.--. .++..++|+++|++.++.
T Consensus 106 fF~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~lLi~ 155 (218)
T PF05724_consen 106 FFELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGLLIT 155 (218)
T ss_dssp TTTGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEEEEE
T ss_pred cccCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 2222211 125999999877321 267789999999954443
No 486
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.49 E-value=0.33 Score=44.74 Aligned_cols=89 Identities=18% Similarity=0.336 Sum_probs=58.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.+|.|.|+ |.+|...+..++..|. +|+++. .++++.+.+++.|....+.. + ..+... ..|+||.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~d----r~~~~~~~a~~~g~~~~~~~---~---~~~~~~---~aDvVii 72 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGAD----RSAETRARARELGLGDRVTT---S---AAEAVK---GADLVIL 72 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEE----CCHHHHHHHHhCCCCceecC---C---HHHHhc---CCCEEEE
Confidence 57999998 9999999988888785 666665 35667777777775322111 1 111122 3899999
Q ss_pred CCCCccH----HHHHHhcccCCEEEEEec
Q 017064 268 CVGGNSA----SKVLKFLSQGGTMVTYGG 292 (378)
Q Consensus 268 ~~g~~~~----~~~~~~l~~~G~~v~~g~ 292 (378)
|+..... ......++++..++.++.
T Consensus 73 avp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 73 CVPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 9987544 233345667777766653
No 487
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.48 E-value=0.2 Score=45.27 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=59.4
Q ss_pred HHHHHHHHHh--ccCCCCEEEEeCCCchHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH-HhCCCcE----EEccCc
Q 017064 175 TALRMLEDFT--TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGADE----VFTESQ 246 (378)
Q Consensus 175 ta~~~l~~~~--~~~~g~~VlV~g~~g~~G~~av~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~~ga~~----vi~~~~ 246 (378)
.-+.+|.+.. ...+|++++|.|+ |+.+.+++.-++..|+ +++++-| +.+|.+.+ +.++... .....+
T Consensus 110 G~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NR----t~~ra~~La~~~~~~~~~~~~~~~~~ 184 (283)
T COG0169 110 GFLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNR----TRERAEELADLFGELGAAVEAAALAD 184 (283)
T ss_pred HHHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhhhcccccccccccc
Confidence 3445555422 2345899999999 9999999999999997 4555554 44444333 3333211 111111
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHH------HHHHhcccCCEEEEEe
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSAS------KVLKFLSQGGTMVTYG 291 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~------~~~~~l~~~G~~v~~g 291 (378)
. +... .+|++|+|++..... ....++++.-.+..+-
T Consensus 185 ~--~~~~-------~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 185 L--EGLE-------EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred c--cccc-------ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 0 0100 289999999742211 0146666666666664
No 488
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.48 E-value=0.37 Score=44.47 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=53.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|++|.|+|. |.+|...++.++.+|++|++..+.. ++. -+.+... . ..++.++..+ .|+|+.
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~----~~~-----~~~~~~~--~---~~~l~e~l~~---aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSR----KSW-----PGVQSFA--G---REELSAFLSQ---TRVLIN 196 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC----CCC-----CCceeec--c---cccHHHHHhc---CCEEEE
Confidence 5789999999 9999999999999999999876431 110 0111111 0 1123333332 677776
Q ss_pred CCCCccH------HHHHHhcccCCEEEEEe
Q 017064 268 CVGGNSA------SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~~~------~~~~~~l~~~G~~v~~g 291 (378)
+...... ...++.|+++..+|.++
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLA 226 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 6664221 34566777777666665
No 489
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.46 E-value=0.16 Score=48.25 Aligned_cols=77 Identities=14% Similarity=0.048 Sum_probs=48.9
Q ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEE
Q 017064 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (378)
Q Consensus 186 ~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvv 265 (378)
+..+.+|||+|++|-+|...+..+...|.+|+++.+... ..... ..++. ..+..+-.+...+.+... ++|+|
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~---~~~~~-~~~~~-~~~~~Dl~d~~~~~~~~~---~~D~V 89 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKN---EHMSE-DMFCH-EFHLVDLRVMENCLKVTK---GVDHV 89 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccc---ccccc-ccccc-eEEECCCCCHHHHHHHHh---CCCEE
Confidence 356789999999999999999999999999999885321 00000 01121 222222223344444443 39999
Q ss_pred EeCCC
Q 017064 266 FNCVG 270 (378)
Q Consensus 266 id~~g 270 (378)
|++++
T Consensus 90 ih~Aa 94 (370)
T PLN02695 90 FNLAA 94 (370)
T ss_pred EEccc
Confidence 99985
No 490
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.44 E-value=0.32 Score=44.98 Aligned_cols=100 Identities=14% Similarity=0.212 Sum_probs=62.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC----CcEEEEecCCCCcHHHHHHHHhCCCc--------------EEEccCcccH---
Q 017064 191 SIVQNGATSIVGQCIIQIARHRG----IHSINIIRDRAGSDEAKEKLKGLGAD--------------EVFTESQLEV--- 249 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g----~~vi~~~~~~~~~~~~~~~~~~~ga~--------------~vi~~~~~~~--- 249 (378)
+|.|.|. |.+|....+.+...+ ..++.+.+. .+.+...++.+++-. .+++.+.-.+
T Consensus 1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~--~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~ 77 (325)
T TIGR01532 1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNEL--ADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHS 77 (325)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecC--CCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEc
Confidence 3789999 999999999987654 677777654 345555555443311 1122111111
Q ss_pred HHHHHHh-cCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEecCC
Q 017064 250 KNVKGLL-ANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMS 294 (378)
Q Consensus 250 ~~i~~~~-~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 294 (378)
.+...+. +..+ +|+||+|+|.... ..+..++..|+..|.++...
T Consensus 78 ~~p~~~~w~~~g-vDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~ 123 (325)
T TIGR01532 78 PTPEALPWRALG-VDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG 123 (325)
T ss_pred CChhhccccccC-CCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence 1122211 2234 9999999998654 56778889998999888553
No 491
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=94.44 E-value=0.97 Score=45.00 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=52.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 188 ~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
.|++|.|+|. |.+|...++.++.+|++|++..+. ...+ ...++|...+ ..+.++... .|+|+-
T Consensus 137 ~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~--~~~~---~~~~~g~~~~--------~~l~ell~~---aDvV~l 199 (525)
T TIGR01327 137 YGKTLGVIGL-GRIGSIVAKRAKAFGMKVLAYDPY--ISPE---RAEQLGVELV--------DDLDELLAR---ADFITV 199 (525)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCC--CChh---HHHhcCCEEc--------CCHHHHHhh---CCEEEE
Confidence 4689999999 999999999999999999887642 1222 2234443211 012222222 666666
Q ss_pred CCCCc-c----H-HHHHHhcccCCEEEEEe
Q 017064 268 CVGGN-S----A-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 268 ~~g~~-~----~-~~~~~~l~~~G~~v~~g 291 (378)
+.... . + ...+..|+++..+|.++
T Consensus 200 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 229 (525)
T TIGR01327 200 HTPLTPETRGLIGAEELAKMKKGVIIVNCA 229 (525)
T ss_pred ccCCChhhccCcCHHHHhcCCCCeEEEEcC
Confidence 55532 1 1 34556666666666555
No 492
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.43 E-value=0.36 Score=43.87 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=69.2
Q ss_pred hccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcc
Q 017064 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (378)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~ 247 (378)
..||++...+..|....---.|++|+|.|.+..+|.=...++...||+|++.-.. + .
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~---T--------------------~ 193 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR---T--------------------Q 193 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC---C--------------------C
Confidence 4567766666666653323468999999999999999999999999998765311 1 0
Q ss_pred cHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 248 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 248 ~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
.+...+. ..|++|-++|.+.+ ---+++++|-.+|.+|..
T Consensus 194 ---~l~~~~~---~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin 232 (297)
T PRK14186 194 ---DLASITR---EADILVAAAGRPNL-IGAEMVKPGAVVVDVGIH 232 (297)
T ss_pred ---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEeccc
Confidence 1223333 29999999998765 224789999999999944
No 493
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.42 E-value=1.1 Score=39.25 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=57.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCc--EEEEecCC----CCc-----HHHHHHHHhCCCcEEEccCcccHHHHHHH
Q 017064 187 NSGDSIVQNGATSIVGQCIIQIARHRGIH--SINIIRDR----AGS-----DEAKEKLKGLGADEVFTESQLEVKNVKGL 255 (378)
Q Consensus 187 ~~g~~VlV~g~~g~~G~~av~la~~~g~~--vi~~~~~~----~~~-----~~~~~~~~~~ga~~vi~~~~~~~~~i~~~ 255 (378)
-.+.+|+|+|+ |+.|...+..+...|++ .+.+++.+ ... +.+..+++.++... .+ .+ +.+.
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~---l~~~ 94 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT---LKEA 94 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC---HHHH
Confidence 45689999999 99999999888888987 44444432 111 12244555554321 11 11 2122
Q ss_pred hcCCCCCcEEEeCCCCccH-HHHHHhcccCCEEEEEe
Q 017064 256 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 291 (378)
Q Consensus 256 ~~~~g~~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~g 291 (378)
.. ++|++|++++...+ ...++.++++..++.+.
T Consensus 95 l~---~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 95 LK---GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred Hh---cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 22 38999999985444 46667777776655443
No 494
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.40 E-value=0.5 Score=42.67 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=69.8
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHH----cCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH----RGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~----~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi 242 (378)
..+||++...+..|....---.|++|+|.|.+..+|.=...++.. .+|+|++.-. ..
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs----~t--------------- 195 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS----RT--------------- 195 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC----Cc---------------
Confidence 356777777777776643335689999999999999999999987 7888876541 11
Q ss_pred ccCcccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 243 TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 243 ~~~~~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
..+.+.+. ..|+||-++|.+.+-. -+++++|..++.+|..
T Consensus 196 -------~~l~~~~~---~ADIVI~AvG~p~li~-~~~vk~GavVIDVGi~ 235 (286)
T PRK14184 196 -------PDLAEECR---EADFLFVAIGRPRFVT-ADMVKPGAVVVDVGIN 235 (286)
T ss_pred -------hhHHHHHH---hCCEEEEecCCCCcCC-HHHcCCCCEEEEeeee
Confidence 11223333 2999999999877622 3677999999999843
No 495
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=94.39 E-value=0.23 Score=43.64 Aligned_cols=77 Identities=10% Similarity=0.098 Sum_probs=46.0
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEEccCccc---HHH-HHHHhcCCCCC
Q 017064 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQLE---VKN-VKGLLANLPEP 262 (378)
Q Consensus 192 VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~ga~-~vi~~~~~~---~~~-i~~~~~~~g~~ 262 (378)
+||+|+++++|...++.+...|++|+++.+.. +++. +.+++.+.. +.+..+-.+ ... +.+.....+..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSG---RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999998887532 2222 222334432 222222111 222 22222223358
Q ss_pred cEEEeCCCC
Q 017064 263 ALGFNCVGG 271 (378)
Q Consensus 263 Dvvid~~g~ 271 (378)
|.+|.++|.
T Consensus 78 ~~li~~ag~ 86 (239)
T TIGR01831 78 YGVVLNAGI 86 (239)
T ss_pred CEEEECCCC
Confidence 999998873
No 496
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.35 E-value=0.31 Score=42.25 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=28.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCC
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~ 223 (378)
.+|+|.|+ |++|...++.+...|..-+.++|.+
T Consensus 29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 68999999 9999999988888899877777653
No 497
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=94.34 E-value=0.27 Score=44.24 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=51.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCcccHHHHHHHhcCCCCCcEEEeCCC
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~i~~~~~~~g~~Dvvid~~g 270 (378)
+|||+|++|=+|.-++..+...|.+|+++.....+..+...... + .++..+-.+.+.+.+...... +|.||.+++
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--~--~f~~gDi~D~~~L~~vf~~~~-idaViHFAa 76 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--F--KFYEGDLLDRALLTAVFEENK-IDAVVHFAA 76 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--C--ceEEeccccHHHHHHHHHhcC-CCEEEECcc
Confidence 69999999999999888888899999998766545554443322 1 122222223344555555544 999999998
Q ss_pred Cc
Q 017064 271 GN 272 (378)
Q Consensus 271 ~~ 272 (378)
..
T Consensus 77 ~~ 78 (329)
T COG1087 77 SI 78 (329)
T ss_pred cc
Confidence 53
No 498
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=94.32 E-value=0.34 Score=44.77 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=70.5
Q ss_pred hhccccHHHHHHHHHHHhccCCCCEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEccCc
Q 017064 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (378)
Q Consensus 167 a~~~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ga~~vi~~~~ 246 (378)
..+||++..+...|....---.|++|+|.|-+..+|.=...++...+|+|++.-.. +
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~---T-------------------- 248 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF---T-------------------- 248 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC---C--------------------
Confidence 45677777777667653333569999999999999999999999999998654311 1
Q ss_pred ccHHHHHHHhcCCCCCcEEEeCCCCccHHHHHHhcccCCEEEEEecC
Q 017064 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 293 (378)
Q Consensus 247 ~~~~~i~~~~~~~g~~Dvvid~~g~~~~~~~~~~l~~~G~~v~~g~~ 293 (378)
. .+.+.+. ..|+||-++|.+.+ ---+++++|-.+|.+|..
T Consensus 249 ~---nl~~~~~---~ADIvIsAvGkp~~-v~~d~vk~GavVIDVGin 288 (345)
T PLN02897 249 K---DPEQITR---KADIVIAAAGIPNL-VRGSWLKPGAVVIDVGTT 288 (345)
T ss_pred C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEcccc
Confidence 0 1222333 39999999998776 224789999999999943
No 499
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.29 E-value=0.29 Score=45.68 Aligned_cols=82 Identities=12% Similarity=0.227 Sum_probs=50.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCc-----------H-------HH----HHHHHhCCCcEEEccCc-
Q 017064 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-----------D-------EA----KEKLKGLGADEVFTESQ- 246 (378)
Q Consensus 190 ~~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~-----------~-------~~----~~~~~~~ga~~vi~~~~- 246 (378)
.+|+|.|+ |++|..+++.+...|..-+.++|.+.-. + .| .+.++++..+.-+....
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~ 103 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ 103 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 68999999 9999999998888899666666553100 0 11 23334444332222211
Q ss_pred -ccHHHHHHHhcCCCCCcEEEeCCCCccHH
Q 017064 247 -LEVKNVKGLLANLPEPALGFNCVGGNSAS 275 (378)
Q Consensus 247 -~~~~~i~~~~~~~g~~Dvvid~~g~~~~~ 275 (378)
...+.+..+..+ +|+||||+.+....
T Consensus 104 ~~~~~~~~~~~~~---~DlVid~~Dn~~~r 130 (339)
T PRK07688 104 DVTAEELEELVTG---VDLIIDATDNFETR 130 (339)
T ss_pred cCCHHHHHHHHcC---CCEEEEcCCCHHHH
Confidence 122344455543 99999999986553
No 500
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=94.28 E-value=0.26 Score=46.22 Aligned_cols=79 Identities=10% Similarity=0.149 Sum_probs=46.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC--Cc-EEEccCcccHHHHHHHhcCCCCCcEEEe
Q 017064 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG--AD-EVFTESQLEVKNVKGLLANLPEPALGFN 267 (378)
Q Consensus 191 ~VlV~g~~g~~G~~av~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g--a~-~vi~~~~~~~~~i~~~~~~~g~~Dvvid 267 (378)
+|||+|++|.+|...+..+...|.++++.++... .......+..+. .. .++..+-.+.+.+.+.....+ +|+||+
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~d~vih 79 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT-YAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQ-PDAVMH 79 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCC-ccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcC-CCEEEE
Confidence 5899999999999999999888887554443211 111122222221 11 223333233445555554333 999999
Q ss_pred CCCC
Q 017064 268 CVGG 271 (378)
Q Consensus 268 ~~g~ 271 (378)
+++.
T Consensus 80 ~A~~ 83 (352)
T PRK10084 80 LAAE 83 (352)
T ss_pred CCcc
Confidence 9974
Done!