Query 017065
Match_columns 378
No_of_seqs 185 out of 790
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 08:21:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017065.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017065hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w32a_ c.1.8.3 (A:) Xylanase 30.2 22 0.0016 31.5 4.6 62 290-353 98-186 (346)
2 d1v5ib1 d.58.3.2 (B:1-72) Prot 24.2 58 0.0042 21.6 4.9 64 284-347 6-70 (72)
3 d1t71a_ d.159.1.9 (A:) Hypothe 14.3 21 0.0016 30.9 0.6 44 309-352 117-161 (281)
4 d1us3a2 c.1.8.3 (A:243-606) Xy 13.2 56 0.004 28.5 3.3 59 292-352 114-196 (364)
5 d1mkya2 c.37.1.8 (A:173-358) P 12.6 2.5E+02 0.018 20.6 7.8 73 296-374 108-184 (186)
6 d2c4ja1 a.45.1.1 (A:86-218) Cl 12.1 15 0.0011 27.6 -1.1 20 358-377 44-63 (133)
7 d1d7ya3 d.87.1.1 (A:309-405) N 11.3 57 0.0042 22.9 2.2 10 267-276 7-16 (97)
8 d2cuqa1 g.39.1.3 (A:43-74) Fou 11.1 21 0.0015 20.4 -0.3 16 226-243 9-24 (32)
9 d1va4a_ c.69.1.12 (A:) Arylest 10.9 1.1E+02 0.0077 23.5 4.1 55 259-318 1-57 (271)
10 d1cxla3 b.71.1.1 (A:407-496) C 10.8 93 0.0067 21.9 3.2 32 14-45 3-34 (90)
No 1
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]}
Probab=30.18 E-value=22 Score=31.45 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=39.8
Q ss_pred CCcHHHHHHHHHHHHHhcCC-cE---EEECCc-CC----------------------CchhhHHHHHHHHHhhcCCCCce
Q 017065 290 EEAPRVVERHFLDLRKKYGN-VL---AVDLVN-KH----------------------GGEGRLCENFGNAMQNVASDDIR 342 (378)
Q Consensus 290 ~~~~~a~~~Hf~~L~~~YG~-i~---~vNLl~-~~----------------------~~E~~L~~~y~~~v~~~~~~~i~ 342 (378)
++....+.+|+..+..+|+. |. |||=.- .. +++.-+..+|+.+-+. +++.+
T Consensus 98 ~~~~~~~~~~I~~v~~ry~g~i~~WDVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar~~--dP~a~ 175 (346)
T d1w32a_ 98 ANFRQDFARHIDTVAAHFAGQVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAA--DPTAE 175 (346)
T ss_dssp TTHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHHH--CTTSE
T ss_pred HHHHHHHHHHHHHHHHhhCCcceEEEEEeeeccccccCccccccccccccchhhhhccChHHHHHHHHHHHHh--CCCCE
Confidence 34567899999999999986 53 555421 10 1344566777776654 34677
Q ss_pred eeEcchhhhhc
Q 017065 343 YLHFDFHRICG 353 (378)
Q Consensus 343 y~~fDfh~~ck 353 (378)
++.=||.-+..
T Consensus 176 L~~Ndyn~~~~ 186 (346)
T d1w32a_ 176 LYYNDFNTEEN 186 (346)
T ss_dssp EEEEESSTTSC
T ss_pred EEeccCCcccC
Confidence 77667765543
No 2
>d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]}
Probab=24.17 E-value=58 Score=21.63 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=43.2
Q ss_pred EEEecCCCcHHHHHHHHHHHHHhcCCc-EEEECCcCCCchhhHHHHHHHHHhhcCCCCceeeEcc
Q 017065 284 FEILRAEEAPRVVERHFLDLRKKYGNV-LAVDLVNKHGGEGRLCENFGNAMQNVASDDIRYLHFD 347 (378)
Q Consensus 284 i~i~~~~~~~~a~~~Hf~~L~~~YG~i-~~vNLl~~~~~E~~L~~~y~~~v~~~~~~~i~y~~fD 347 (378)
|.......+......|.+.+....|.+ +..++=.=+|.=..|.+.-.+.++.++++.+.|+.=|
T Consensus 6 IVvlK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GFaa~l~e~~l~~lr~~p~~~V~yVE~D 70 (72)
T d1v5ib1 6 IVIFKNDVSEDKIRETKDEVIAEGGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (72)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred EEEECCCCCHHHHHHHHHHHHhcCCceEEEEeeeeeeEEEEecCHHHHHHHHhCCCCCCceECCC
Confidence 344445556678899999999999875 4555422355555566666666777777789998755
No 3
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=14.26 E-value=21 Score=30.94 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=26.0
Q ss_pred CcEEEECCcCCCch-hhHHHHHHHHHhhcCCCCceeeEcchhhhh
Q 017065 309 NVLAVDLVNKHGGE-GRLCENFGNAMQNVASDDIRYLHFDFHRIC 352 (378)
Q Consensus 309 ~i~~vNLl~~~~~E-~~L~~~y~~~v~~~~~~~i~y~~fDfh~~c 352 (378)
.+.+|||+.+.-.. ......|+..-+.+......++-.|||+|.
T Consensus 117 ~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~~~~d~i~VDfHaEA 161 (281)
T d1t71a_ 117 KIRITNLLGTSVPLPFKTTNPFKVLKELILKRDCDLHIVDFHAET 161 (281)
T ss_dssp EEEEEEEECTTSCCSSCBCCHHHHHHHHHTTCCCSEEEEEEECSC
T ss_pred ceeeeeeccccccccccccHHHHHHHHhhcccCCCeEEEEeccch
Confidence 46789999764211 112222333333334457788999999985
No 4
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]}
Probab=13.17 E-value=56 Score=28.53 Aligned_cols=59 Identities=14% Similarity=0.207 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHHHhc---CCcE---EEECC-cCCC-----------------chhhHHHHHHHHHhhcCCCCceeeEcc
Q 017065 292 APRVVERHFLDLRKKY---GNVL---AVDLV-NKHG-----------------GEGRLCENFGNAMQNVASDDIRYLHFD 347 (378)
Q Consensus 292 ~~~a~~~Hf~~L~~~Y---G~i~---~vNLl-~~~~-----------------~E~~L~~~y~~~v~~~~~~~i~y~~fD 347 (378)
...++.+|...+..+| |.|. |+|=. ...+ .+.-+..+|+.+-+. .++.+.+.=|
T Consensus 114 ~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~--~p~a~l~~nd 191 (364)
T d1us3a2 114 FLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAA--DPAVILYYND 191 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHH--CTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHh--ccccceeecc
Confidence 3467889999999999 5574 56632 1111 122455667655443 3455555556
Q ss_pred hhhhh
Q 017065 348 FHRIC 352 (378)
Q Consensus 348 fh~~c 352 (378)
|.-+.
T Consensus 192 y~~~~ 196 (364)
T d1us3a2 192 YNIEQ 196 (364)
T ss_dssp SSTTS
T ss_pred ccccc
Confidence 66554
No 5
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=12.64 E-value=2.5e+02 Score=20.56 Aligned_cols=73 Identities=7% Similarity=0.062 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhcCC--cEEEECCcCCCchhhHHHHHHHHHhhcC--CCCceeeEcchhhhhcCCCcchHHHHHHHHHHHH
Q 017065 296 VERHFLDLRKKYGN--VLAVDLVNKHGGEGRLCENFGNAMQNVA--SDDIRYLHFDFHRICGHVHFERLSILFEQIEDFL 371 (378)
Q Consensus 296 ~~~Hf~~L~~~YG~--i~~vNLl~~~~~E~~L~~~y~~~v~~~~--~~~i~y~~fDfh~~ck~~~~~~l~~L~~~i~~~l 371 (378)
-.+++..+.+.++. ++++|=++.-..+....+.+.+.+.... .+.+..+ .+....=.+++.|++.|++.+
T Consensus 108 ~~~~~~~~~~~~~~~~i~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~------~vSa~~g~gv~~L~~~i~~~~ 181 (186)
T d1mkya2 108 QDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLI------FTSADKGWNIDRMIDAMNLAY 181 (186)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECGGGSTTGGGCHHHHHHHHHHHCGGGTTSCEE------ECBTTTTBSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCceeeeccchhhhcchhhhhhhHHHHHHHHhcccCCCeEE------EEeCCCCCCHHHHHHHHHHHH
Confidence 34556666667775 4556877653333222333444333211 0111111 122333468899999998888
Q ss_pred HhC
Q 017065 372 EKN 374 (378)
Q Consensus 372 ~~~ 374 (378)
+++
T Consensus 182 ~~~ 184 (186)
T d1mkya2 182 ASY 184 (186)
T ss_dssp HHH
T ss_pred HhC
Confidence 764
No 6
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.06 E-value=15 Score=27.58 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=15.2
Q ss_pred chHHHHHHHHHHHHHhCccc
Q 017065 358 ERLSILFEQIEDFLEKNGVR 377 (378)
Q Consensus 358 ~~l~~L~~~i~~~l~~~gyf 377 (378)
+++...++.+++.|.+.|||
T Consensus 44 ~~l~~~l~~le~~L~~~~~l 63 (133)
T d2c4ja1 44 QALPEMLKLYSQFLGKQPWF 63 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSBT
T ss_pred HHHHHHHHHHHHHhCCCCee
Confidence 56667777888888888876
No 7
>d1d7ya3 d.87.1.1 (A:309-405) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=11.29 E-value=57 Score=22.90 Aligned_cols=10 Identities=20% Similarity=0.873 Sum_probs=8.3
Q ss_pred CcceeeEEcc
Q 017065 267 SIPFLWEQTV 276 (378)
Q Consensus 267 SVPlfW~Q~~ 276 (378)
.||-|||.+-
T Consensus 7 ~vP~FWSdQ~ 16 (97)
T d1d7ya3 7 ELPWYWSDQG 16 (97)
T ss_dssp CCCEEEEEET
T ss_pred CCCcEEeccC
Confidence 5899999864
No 8
>d2cuqa1 g.39.1.3 (A:43-74) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.09 E-value=21 Score=20.35 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=11.0
Q ss_pred CCCcccccccCCCCCcce
Q 017065 226 RNGTRMWRRGADSDGYVA 243 (378)
Q Consensus 226 raGtRy~~RGid~~G~vA 243 (378)
-||.||.+| |+.-+++
T Consensus 9 LaGqrFTSr--de~pYC~ 24 (32)
T d2cuqa1 9 LAGQQFTSR--DEDPYCV 24 (32)
T ss_dssp CTTCCEEEC--SSSEEEH
T ss_pred ccCCccccC--CCCccHH
Confidence 489999998 4544444
No 9
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=10.86 E-value=1.1e+02 Score=23.46 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=35.0
Q ss_pred EEEEEeecCcceeeEEccCCCccceEEEec-CCCcHHHHHHHHHHHHHhcC-CcEEEECCcC
Q 017065 259 ASFVQVRGSIPFLWEQTVDLTYKPKFEILR-AEEAPRVVERHFLDLRKKYG-NVLAVDLVNK 318 (378)
Q Consensus 259 ~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~~-~~~~~~a~~~Hf~~L~~~YG-~i~~vNLl~~ 318 (378)
+|||.+.| +.++|.+.++ .|++.+.. ...+...+..-.+.|.++ | .++++++-+.
T Consensus 1 s~f~~~dG-~~l~y~~~G~---g~~vv~lHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~ 57 (271)
T d1va4a_ 1 STFVAKDG-TQIYFKDWGS---GKPVLFSHGWLLDADMWEYQMEYLSSR-GYRTIAFDRRGF 57 (271)
T ss_dssp CEEECTTS-CEEEEEEESS---SSEEEEECCTTCCGGGGHHHHHHHHTT-TCEEEEECCTTS
T ss_pred CEEEeECC-eEEEEEEEcC---CCeEEEECCCCCCHHHHHHHHHHHHhC-CCEEEEEecccc
Confidence 47888888 9999998753 36666543 333444444444555444 4 5888999764
No 10
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]}
Probab=10.75 E-value=93 Score=21.85 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=24.5
Q ss_pred eEEEEEECCEEEEEeCCCCCcceEEEECCCCc
Q 017065 14 RMRLWEFPDQFVVEPTDGSSGSALAISRADGS 45 (378)
Q Consensus 14 ~~~L~~t~~~~ii~~~~~~~~~~L~IdR~~g~ 45 (378)
.-++|.++|.|+++...+.....+.|+|...+
T Consensus 3 ~~~rw~~~DvyvyeR~~g~~~vlVAiNr~~~~ 34 (90)
T d1cxla3 3 TQERWINNDVLIYERKFGSNVAVVAVNRNLNA 34 (90)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEECCSSC
T ss_pred cEEEEECCCEEEEEEEcCCCEEEEEEECCCCC
Confidence 34789999999999875543467899997554
Done!