Query 017066
Match_columns 378
No_of_seqs 187 out of 1722
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:22:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017066.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017066hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 5.1E-91 1.7E-95 694.3 39.7 374 2-375 109-486 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 5.7E-88 2E-92 677.4 40.9 376 2-378 136-518 (520)
3 3ifg_A Succinate-semialdehyde 100.0 8.5E-88 2.9E-92 671.8 37.7 369 2-371 114-483 (484)
4 3ros_A NAD-dependent aldehyde 100.0 1.4E-87 4.7E-92 669.8 38.8 370 2-373 90-459 (484)
5 3rh9_A Succinate-semialdehyde 100.0 2.9E-87 9.8E-92 670.3 40.1 370 2-372 113-484 (506)
6 3u4j_A NAD-dependent aldehyde 100.0 5.6E-87 1.9E-91 671.4 40.9 371 2-373 127-499 (528)
7 2o2p_A Formyltetrahydrofolate 100.0 3.8E-87 1.3E-91 671.1 39.3 369 2-371 141-516 (517)
8 1bxs_A Aldehyde dehydrogenase; 100.0 1.2E-86 4E-91 665.7 41.6 372 2-373 126-497 (501)
9 3iwj_A Putative aminoaldehyde 100.0 1.1E-86 3.9E-91 667.1 41.1 376 2-378 114-497 (503)
10 3ek1_A Aldehyde dehydrogenase; 100.0 5.8E-87 2E-91 667.8 37.2 368 2-372 134-502 (504)
11 1o04_A Aldehyde dehydrogenase, 100.0 1E-86 3.6E-91 665.9 38.9 372 2-373 125-496 (500)
12 4f3x_A Putative aldehyde dehyd 100.0 8.8E-87 3E-91 666.1 35.9 369 2-372 127-497 (498)
13 3k2w_A Betaine-aldehyde dehydr 100.0 2E-86 6.8E-91 664.4 37.3 372 2-374 114-490 (497)
14 2d4e_A 5-carboxymethyl-2-hydro 100.0 9.5E-86 3.2E-90 661.7 41.4 370 2-373 128-506 (515)
15 3b4w_A Aldehyde dehydrogenase; 100.0 2.5E-86 8.6E-91 662.9 37.0 368 2-372 113-482 (495)
16 3jz4_A Succinate-semialdehyde 100.0 9.5E-86 3.2E-90 657.9 41.1 369 2-371 111-480 (481)
17 1a4s_A ALDH, betaine aldehyde 100.0 3.6E-86 1.2E-90 663.0 37.5 369 2-372 122-496 (503)
18 3r31_A BADH, betaine aldehyde 100.0 3.1E-86 1E-90 664.5 36.5 368 2-372 114-488 (517)
19 3qan_A 1-pyrroline-5-carboxyla 100.0 1.4E-85 4.9E-90 662.6 40.9 370 2-373 138-517 (538)
20 2imp_A Lactaldehyde dehydrogen 100.0 1.7E-85 5.9E-90 655.7 39.6 369 2-371 108-478 (479)
21 1wnd_A Putative betaine aldehy 100.0 1.2E-85 4.2E-90 657.4 38.5 367 2-371 125-494 (495)
22 3prl_A NADP-dependent glyceral 100.0 9.7E-86 3.3E-90 659.7 37.2 365 2-373 113-484 (505)
23 2ve5_A BADH, betaine aldehyde 100.0 4.8E-85 1.6E-89 654.6 39.9 371 2-373 109-484 (490)
24 3etf_A Putative succinate-semi 100.0 7.5E-85 2.6E-89 649.0 40.5 369 2-372 93-461 (462)
25 3i44_A Aldehyde dehydrogenase; 100.0 1.1E-84 3.8E-89 650.8 41.6 364 2-369 128-495 (497)
26 4e4g_A Methylmalonate-semialde 100.0 3.6E-85 1.2E-89 657.3 37.5 371 2-374 128-507 (521)
27 2w8n_A Succinate-semialdehyde 100.0 3.9E-85 1.3E-89 653.6 35.6 369 2-372 112-486 (487)
28 3pqa_A Lactaldehyde dehydrogen 100.0 1E-84 3.4E-89 649.5 38.4 362 2-372 98-464 (486)
29 1uxt_A Glyceraldehyde-3-phosph 100.0 1.3E-84 4.3E-89 651.5 35.6 364 2-372 119-492 (501)
30 3r64_A NAD dependent benzaldeh 100.0 3.3E-84 1.1E-88 650.0 38.4 373 2-378 114-496 (508)
31 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.2E-83 4.2E-88 647.0 41.1 368 2-371 138-515 (516)
32 2j6l_A Aldehyde dehydrogenase 100.0 8.8E-84 3E-88 645.7 38.9 369 2-372 123-499 (500)
33 1euh_A NADP dependent non phos 100.0 5.1E-84 1.7E-88 644.5 36.9 364 2-372 104-474 (475)
34 4dng_A Uncharacterized aldehyd 100.0 7.6E-84 2.6E-88 645.1 36.7 368 2-373 108-479 (485)
35 1t90_A MMSDH, probable methylm 100.0 2E-83 6.8E-88 641.5 36.4 373 2-377 107-485 (486)
36 3ty7_A Putative aldehyde dehyd 100.0 1.6E-83 5.4E-88 641.7 32.4 363 2-370 110-475 (478)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 4.4E-82 1.5E-86 638.6 40.2 375 2-378 166-559 (563)
38 4h7n_A Aldehyde dehydrogenase; 100.0 4.1E-82 1.4E-86 630.6 38.1 373 2-378 91-472 (474)
39 3sza_A Aldehyde dehydrogenase, 100.0 1.6E-81 5.6E-86 624.2 40.5 359 3-372 84-448 (469)
40 4f9i_A Proline dehydrogenase/d 100.0 3.3E-80 1.1E-84 657.0 39.3 370 2-372 632-1010(1026)
41 3lns_A Benzaldehyde dehydrogen 100.0 1.1E-79 3.8E-84 610.4 39.5 357 2-371 93-456 (457)
42 3ju8_A Succinylglutamic semial 100.0 6.3E-80 2.2E-84 616.8 36.4 362 2-372 106-471 (490)
43 2y53_A Aldehyde dehydrogenase 100.0 8.8E-79 3E-83 614.4 33.8 366 2-371 108-518 (534)
44 3haz_A Proline dehydrogenase; 100.0 1.7E-77 6E-82 634.8 38.9 365 2-372 614-987 (1001)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 6.3E-74 2.2E-78 576.0 33.6 353 2-369 94-480 (510)
46 3v4c_A Aldehyde dehydrogenase 100.0 2.8E-74 9.7E-79 580.8 31.1 354 2-368 127-514 (528)
47 1vlu_A Gamma-glutamyl phosphat 100.0 2.6E-70 8.8E-75 543.3 19.5 331 2-372 84-440 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.7E-68 5.8E-73 531.1 25.9 327 25-373 98-450 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 7.8E-69 2.7E-73 532.0 22.8 321 2-372 104-435 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 5.5E-68 1.9E-72 524.3 23.8 323 2-372 102-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.3E-67 4.5E-72 519.2 23.3 321 2-372 90-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 6E-65 2.1E-69 504.0 20.8 328 25-375 93-452 (452)
53 4gic_A HDH, histidinol dehydro 97.5 0.023 7.7E-07 54.1 22.3 260 24-368 118-399 (423)
54 1kae_A HDH, histidinol dehydro 97.4 0.055 1.9E-06 51.6 23.0 258 26-369 114-393 (434)
55 2fiu_A Conserved hypothetical 69.4 8.8 0.0003 28.6 5.4 22 281-302 55-76 (99)
56 1s7i_A Hypothetical protein PA 56.9 29 0.001 26.9 6.5 29 274-303 80-108 (124)
57 3lo3_A Uncharacterized conserv 48.7 26 0.0009 25.6 4.8 23 280-302 53-75 (94)
58 3pzy_A MOG; ssgcid, seattle st 43.3 15 0.00052 30.0 3.0 52 76-128 27-80 (164)
59 3hhl_A RPA0582; alpha-beta-bar 41.8 34 0.0012 27.2 4.8 65 221-302 45-110 (143)
60 3v42_A Folliculin; tumor suppr 41.0 22 0.00076 30.8 3.7 68 53-128 21-88 (226)
61 1b93_A Protein (methylglyoxal 39.3 46 0.0016 26.9 5.2 114 37-176 12-135 (152)
62 3rfq_A Pterin-4-alpha-carbinol 37.0 17 0.00059 30.4 2.4 53 76-128 49-103 (185)
63 3iwt_A 178AA long hypothetical 36.3 51 0.0018 26.9 5.3 52 76-127 40-94 (178)
64 2zfz_A Arginine repressor; DNA 35.3 65 0.0022 22.6 4.9 38 60-101 18-55 (79)
65 1y5e_A Molybdenum cofactor bio 34.2 30 0.001 28.3 3.4 52 76-127 31-85 (169)
66 1b4b_A Arginine repressor; cor 34.1 62 0.0021 22.2 4.6 57 61-134 11-67 (71)
67 1vmd_A MGS, methylglyoxal synt 33.2 38 0.0013 28.1 3.8 123 28-176 18-151 (178)
68 1xxa_A ARGR, arginine represso 31.5 56 0.0019 23.0 4.0 38 61-101 13-50 (78)
69 2i2c_A Probable inorganic poly 30.7 57 0.0019 28.8 4.9 88 66-171 5-94 (272)
70 2yvq_A Carbamoyl-phosphate syn 30.1 42 0.0014 26.6 3.5 63 82-146 60-132 (143)
71 2p5m_A Arginine repressor; alp 29.1 64 0.0022 22.9 4.1 57 61-134 23-79 (83)
72 2bon_A Lipid kinase; DAG kinas 27.8 1.2E+02 0.0041 27.5 6.7 104 65-172 33-146 (332)
73 2pjk_A 178AA long hypothetical 27.5 30 0.001 28.6 2.3 53 76-128 40-95 (178)
74 3v4g_A Arginine repressor; vib 26.7 55 0.0019 27.2 3.7 43 56-101 110-152 (180)
75 1wu2_A MOEA protein, molybdopt 25.9 18 0.00062 34.2 0.7 52 77-128 212-264 (396)
76 2v9v_A Selenocysteine-specific 25.1 88 0.003 23.9 4.6 80 166-248 36-124 (135)
77 2qv7_A Diacylglycerol kinase D 24.9 1.3E+02 0.0044 27.2 6.4 104 65-172 28-142 (337)
78 2ioj_A Hypothetical protein AF 24.8 60 0.002 25.3 3.6 44 93-136 53-96 (139)
79 1mkz_A Molybdenum cofactor bio 23.4 53 0.0018 26.8 3.1 51 77-127 29-82 (172)
80 3kbq_A Protein TA0487; structu 22.2 57 0.0019 26.8 3.0 51 76-126 23-74 (172)
81 2ec4_A FAS-associated factor 1 21.6 41 0.0014 27.8 2.0 45 275-319 25-73 (178)
82 2xw6_A MGS, methylglyoxal synt 21.5 31 0.0011 27.2 1.2 62 81-144 40-110 (134)
83 2l69_A Rossmann 2X3 fold prote 21.0 2.1E+02 0.0071 20.8 5.3 44 281-324 52-98 (134)
84 1b4a_A Arginine repressor; hel 20.1 1.2E+02 0.0042 24.1 4.5 61 57-134 85-145 (149)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5.1e-91 Score=694.35 Aligned_cols=374 Identities=44% Similarity=0.755 Sum_probs=357.3
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+.+++++.++..+...+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l 188 (490)
T 2wme_A 109 GADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188 (490)
T ss_dssp HHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHH
Confidence 56889999999999888776666667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++|+|+|++.++++.|++||++|.|.||||+.+|+.+.+.++.+++||+++|||||||+||++|||++
T Consensus 189 ~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~ 268 (490)
T 2wme_A 189 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLD 268 (490)
T ss_dssp HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHH
Confidence 99999999999999999998889999999999999999999999999988766555789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.++++++.++|++++++|
T Consensus 269 ~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 348 (490)
T 2wme_A 269 RAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQK 348 (490)
T ss_dssp HHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017066 242 AKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 242 a~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++++||+... .+|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 349 a~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~ 428 (490)
T 2wme_A 349 ARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428 (490)
T ss_dssp CEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred CEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHH
Confidence 99999998643 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCC
Q 017066 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 375 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~ 375 (378)
++++++++|.|+||++....+.+||||+|+||+|+++|.+||++||+.|+|+++..+.
T Consensus 429 ~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g~~ 486 (490)
T 2wme_A 429 RAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDY 486 (490)
T ss_dssp HHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred HHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECCCC
Confidence 9999999999999998777888999999999999999999999999999999997543
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=5.7e-88 Score=677.45 Aligned_cols=376 Identities=39% Similarity=0.696 Sum_probs=357.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 136 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~ 215 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215 (520)
T ss_dssp HHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHH
Confidence 56789999999988877655433 45678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++.+.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 216 l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl 294 (520)
T 3ed6_A 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADF 294 (520)
T ss_dssp HHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 295 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 374 (520)
T 3ed6_A 295 ELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE 374 (520)
T ss_dssp HHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017066 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||+... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 375 Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 454 (520)
T 3ed6_A 375 GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454 (520)
T ss_dssp TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 999999998642 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC--CCCCC
Q 017066 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK--NPAWL 378 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~--~~~~~ 378 (378)
+++++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++.. ...||
T Consensus 455 ~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 455 QRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp HHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred HHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 999999999999999988778899999999999999999999999999999999875 34565
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=8.5e-88 Score=671.79 Aligned_cols=369 Identities=40% Similarity=0.653 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+.++++..++..+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 114 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 193 (484)
T 3ifg_A 114 AASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALA 193 (484)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 57889999999988776655433 45678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++.+.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 194 l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 194 MAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP-TVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGG-GTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhc-cCCceEEecCCCCeEEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 273 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 352 (484)
T 3ifg_A 273 DAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAK 352 (484)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017066 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 353 Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 432 (484)
T 3ifg_A 353 GASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVA 432 (484)
T ss_dssp TCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHH
T ss_pred CCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999865557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017066 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++|+|+||+.....+.+||||+|+||+|+++|.+||++|++.|+|++.
T Consensus 433 ~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 433 EALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999777788999999999999999999999999999999864
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.4e-87 Score=669.79 Aligned_cols=370 Identities=29% Similarity=0.465 Sum_probs=354.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|
T Consensus 90 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 169 (484)
T 3ros_A 90 CVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALT 169 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56789999999998877655444566789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|++.+.++ |++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 170 ~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~ 247 (484)
T 3ros_A 170 AKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQ 247 (484)
T ss_dssp HHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEEECTTCCHH
T ss_pred HHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcceeCCCCCHH
Confidence 99999999999999999998777788 9999999999999999999999999987 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 248 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 327 (484)
T 3ros_A 248 VLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAG 327 (484)
T ss_dssp HHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017066 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 328 a~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~ 407 (484)
T 3ros_A 328 AKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSA 407 (484)
T ss_dssp CEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHH
T ss_pred CeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 99999998655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++..
T Consensus 408 ~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 408 QIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred hCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999987788999999999999999999999999999999998753
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.9e-87 Score=670.33 Aligned_cols=370 Identities=36% Similarity=0.597 Sum_probs=354.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeee-eeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+...+...++++ +|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 113 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 192 (506)
T 3rh9_A 113 AAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIA 192 (506)
T ss_dssp HHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence 56789999999999888766544556778899 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++|.+.+.++.|++||++|.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 193 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl 271 (506)
T 3rh9_A 193 FFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE-QVKKLALELGGNAPFIVFDDADL 271 (506)
T ss_dssp HHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT-TTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh-cCCceEEecCCCCceEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999999886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 272 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 351 (506)
T 3rh9_A 272 EAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDK 351 (506)
T ss_dssp HHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCC-CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017066 241 GAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||...+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 352 Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~ 431 (506)
T 3rh9_A 352 GASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRV 431 (506)
T ss_dssp TCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHH
T ss_pred CCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 9999999986444 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 432 ~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 432 AAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999998888888999999999999999999999999999998874
No 6
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-87 Score=671.40 Aligned_cols=371 Identities=43% Similarity=0.719 Sum_probs=355.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 127 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 206 (528)
T 3u4j_A 127 CADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIR 206 (528)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHH
Confidence 56789999999988877665543 46678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 207 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl 285 (528)
T 3u4j_A 207 LAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADL 285 (528)
T ss_dssp HHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHh-cCCceEEecCCCCeeEECCCCCH
Confidence 99999999999999999999888899999999999999999999999999998887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 286 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 365 (528)
T 3u4j_A 286 DAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITS 365 (528)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCC-CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017066 241 GAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 366 Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 445 (528)
T 3u4j_A 366 GAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQT 445 (528)
T ss_dssp TCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHH
T ss_pred CCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHH
Confidence 9999999986544 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++++|+|+||+++...+.+||||+|+||+|+++|.+||++|++.|+|+++..
T Consensus 446 ~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 446 IRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp HHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred HHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 999999999999988788999999999999999999999999999999998863
No 7
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.8e-87 Score=671.05 Aligned_cols=369 Identities=44% Similarity=0.821 Sum_probs=351.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCC----CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++||+.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 141 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~t 220 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLT 220 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHH
Confidence 5788999999998877765443 223357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCCCCcEEEcC
Q 017066 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+.+++++|.++|+|+|++|+++|.+.+.++.|++||++|.|.||||+.+|+.|++.++ + ++||+++|+|||||+||++
T Consensus 221 a~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~-~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 221 ALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALS-NVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH-TCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHh-cCCeEEEECCCcCeEEECC
Confidence 9999999999999999999999987788999999999999999999999999999988 6 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017066 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|+|+++++||+++.+++++++++|++
T Consensus 300 dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~ 379 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQR 379 (517)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHHHcCCCCceEEEecCCHH
Q 017066 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++|+++++||+.....|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.+
T Consensus 380 a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~ 459 (517)
T 2o2p_A 380 GVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459 (517)
T ss_dssp HHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHH
T ss_pred HHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHH
Confidence 99999999999986544699999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017066 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++++|+|+||+++...+.+||||+|+||+|+++|.+||++|++.|+|+++
T Consensus 460 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 460 KALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 999999999999999999877778999999999999999999999999999999876
No 8
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.2e-86 Score=665.70 Aligned_cols=372 Identities=60% Similarity=1.054 Sum_probs=353.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+
T Consensus 126 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 205 (501)
T 1bxs_A 126 CIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHM 205 (501)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHH
Confidence 46789999999988877654444455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|.+.+.++.|++||++|.|.||||+.+|+.|++.++..++||+++|+|||||+||++|||++
T Consensus 206 ~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~ 285 (501)
T 1bxs_A 206 GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLD 285 (501)
T ss_dssp HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHH
Confidence 99999999999999999997788899999999999999999999999999998823789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 286 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 365 (501)
T 1bxs_A 286 NAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 365 (501)
T ss_dssp HHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017066 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||+.....|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 366 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 445 (501)
T 1bxs_A 366 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 445 (501)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHH
Confidence 99999997644468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|+|.++..
T Consensus 446 ~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 446 ALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred hcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 9999999999987777889999999999999999999999999999988753
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.1e-86 Score=667.05 Aligned_cols=376 Identities=43% Similarity=0.788 Sum_probs=355.4
Q ss_pred HHHHHHHHHHHHhhhcCccC-C---CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017066 2 TTRLFRYYAGWADKIQGLTA-P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++.+++++.++.. + ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 193 (503)
T 3iwj_A 114 VAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLT 193 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHH
Confidence 56789999999988766541 1 1235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017066 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.++|+|+|++++++|.+.+.++.|+.||++|.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 194 ~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-~l~~v~lElGGk~p~iV~~d 272 (503)
T 3iwj_A 194 CLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFED 272 (503)
T ss_dssp HHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGG-GTCCEEEECCCCEEEEECSS
T ss_pred HHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhc-CCCCEEEECCCCCceEEcCC
Confidence 99999999999999999999999888899999999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 273 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 352 (503)
T 3iwj_A 273 VDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNA 352 (503)
T ss_dssp SCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 238 VDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 353 ~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 432 (503)
T 3iwj_A 353 KSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLER 432 (503)
T ss_dssp HHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHH
T ss_pred HHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 999999999998654 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC--CCCCC
Q 017066 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK--NPAWL 378 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~--~~~~~ 378 (378)
++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+|.++.. .+.||
T Consensus 433 a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 433 CERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred HHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 9999999999999999987778899999999999999999999999999999998864 44565
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=5.8e-87 Score=667.84 Aligned_cols=368 Identities=39% Similarity=0.670 Sum_probs=351.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++||+.++++..++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 134 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~ 213 (504)
T 3ek1_A 134 AASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALA 213 (504)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 56789999999988776654432 35678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++.+.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 214 l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 214 LGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP-TIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh-hcCCeEecCCCCCeeEEcCCCCH
Confidence 99999999999999999998888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 293 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 372 (504)
T 3ek1_A 293 DAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSK 372 (504)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017066 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||+. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 373 Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 373 GAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 9999999975 35899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++|+|+||+.....+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 451 ~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 451 EALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 9999999999998777789999999999999999999999999999998875
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1e-86 Score=665.88 Aligned_cols=372 Identities=62% Similarity=1.055 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++||+++++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 125 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 204 (500)
T 1o04_A 125 VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYV 204 (500)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHH
Confidence 46789999999888777654443455678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|.+.+.++.|++||++|.|.||||+.+|+.|++.++..++||+++|+|||||+||++|||++
T Consensus 205 ~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~ 284 (500)
T 1o04_A 205 ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMD 284 (500)
T ss_dssp HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHH
Confidence 99999999999999999997788999999999999999999999999999998823789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 285 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 364 (500)
T 1o04_A 285 WAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 364 (500)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017066 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||+.....|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 365 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 444 (500)
T 1o04_A 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 444 (500)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 99999997643468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|.++..
T Consensus 445 ~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 445 ALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred hCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 9999999999987777889999999999999999999999999999988753
No 12
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=8.8e-87 Score=666.14 Aligned_cols=369 Identities=34% Similarity=0.623 Sum_probs=352.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 127 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~ 206 (498)
T 4f3x_A 127 IIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206 (498)
T ss_dssp HHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHH
Confidence 5678999999998877665432 245678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++ +|+|++|+++|++.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 207 l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dADl 284 (498)
T 4f3x_A 207 LARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADL 284 (498)
T ss_dssp HHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCceeecCCCCCcEEECCCCCH
Confidence 99999999 99999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 285 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 285 EAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-eEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017066 241 GA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 241 ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 99 99999986555799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 445 a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 99999999999998877789999999999999999999999999999998763
No 13
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2e-86 Score=664.40 Aligned_cols=372 Identities=37% Similarity=0.603 Sum_probs=352.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 193 (497)
T 3k2w_A 114 TATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTE 193 (497)
T ss_dssp HHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 5678999999998887765443 345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 194 l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 194 LGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE-YMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTT-TTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhh-cCCCeEEEcCCCCceEEcCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 273 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 352 (497)
T 3k2w_A 273 DKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQ 352 (497)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcc--cCC--CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017066 241 GAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||+. .+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 353 Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 432 (497)
T 3k2w_A 353 GATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANI 432 (497)
T ss_dssp HCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHH
T ss_pred CCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Confidence 9999999973 222 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 017066 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
+++++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++...
T Consensus 433 ~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~ 490 (497)
T 3k2w_A 433 NQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEAE 490 (497)
T ss_dssp HHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEccc
Confidence 9999999999999999887788999999999999999999999999999999998754
No 14
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9.5e-86 Score=661.68 Aligned_cols=370 Identities=42% Similarity=0.728 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 128 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 207 (515)
T 2d4e_A 128 AAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATK 207 (515)
T ss_dssp HHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHH
Confidence 5678999999998887765443 345567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++|.+.++++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 208 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~-~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 208 LAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-cCCceEecCCCcCeEEEcCCCCH
Confidence 99999999999999999999777889999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 287 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 366 (515)
T 2d4e_A 287 ERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKRE 366 (515)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC--------CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCC
Q 017066 241 GAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 312 (378)
Q Consensus 241 ga~~~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 312 (378)
|+++++||+... ..|+|++|||+.+ +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 367 Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 445 (515)
T 2d4e_A 367 GARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRD 445 (515)
T ss_dssp TCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSB
T ss_pred CCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCC
Confidence 999999997543 2689999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 313 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 313 ~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+|+++|++.|+|.++..
T Consensus 446 ~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 446 LERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp HHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred HHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcCC
Confidence 9999999999999999999987777899999999999999999999999999999998753
No 15
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-86 Score=662.88 Aligned_cols=368 Identities=39% Similarity=0.662 Sum_probs=350.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 113 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 192 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANAL 192 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHH
Confidence 56789999999988877654433344678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++| +.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 193 ~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-~l~pv~lELGGk~p~iV~~dADl~ 270 (495)
T 3b4w_A 193 AEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLA 270 (495)
T ss_dssp HHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTCCHH
T ss_pred HHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCceeecCCCcceEEECCCCCHH
Confidence 9999999999999999999 88899999999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 271 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 350 (495)
T 3b4w_A 271 AAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEG 350 (495)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017066 242 AKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 242 a~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+++++||+... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 351 a~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 430 (495)
T 3b4w_A 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKI 430 (495)
T ss_dssp CEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHH
T ss_pred CEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHH
Confidence 99999997643 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++|+|+||+++ ..+.+||||+|.||+|+++|.+||++|++.|+|.++.
T Consensus 431 ~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 431 SQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999987 7789999999999999999999999999999998875
No 16
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=9.5e-86 Score=657.87 Aligned_cols=369 Identities=38% Similarity=0.667 Sum_probs=351.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++.+..++..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 111 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 190 (481)
T 3jz4_A 111 AASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190 (481)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 5678899999888776655443 345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 191 l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 191 LAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTT-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeEEEcCCCCH
Confidence 99999999999999999999888899999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 270 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 349 (481)
T 3jz4_A 270 DKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEK 349 (481)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHH
Q 017066 241 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 320 (378)
Q Consensus 241 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~ 320 (378)
|+++++||...+..|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 350 Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 429 (481)
T 3jz4_A 350 GARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVG 429 (481)
T ss_dssp TCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 99999999865456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017066 321 RALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 321 ~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++|.|+||++....+.+||||+|+||+|+++|.+||++|++.|+|+++
T Consensus 430 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 430 EALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999877788999999999999999999999999999999875
No 17
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=3.6e-86 Score=662.98 Aligned_cols=369 Identities=40% Similarity=0.748 Sum_probs=350.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 122 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l 201 (503)
T 1a4s_A 122 AWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVIL 201 (503)
T ss_dssp HHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence 56789999999988776554433344678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|++++++|.+ ++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 202 ~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~-~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 202 AEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-cCCceEEecCCcCeEEECCCCCHH
Confidence 999999999999999999977 889999999999999999999999999999886 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 280 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 359 (503)
T 1a4s_A 280 NAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEG 359 (503)
T ss_dssp HHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCccc--C----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 242 AKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 242 a~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++||+.. . ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 360 a~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (503)
T 1a4s_A 360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439 (503)
T ss_dssp CEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred CEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 9999999754 2 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||++....+.+||||+|+||+|+++|.+||++|++.|+|.++.
T Consensus 440 a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 440 AHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999998777788999999999999999999999999999998864
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.1e-86 Score=664.50 Aligned_cols=368 Identities=41% Similarity=0.721 Sum_probs=351.2
Q ss_pred HHHHHHHHHHHHhh----hcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017066 2 TTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++.++++ +.++..+...+. .+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 114 ~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 192 (517)
T 3r31_A 114 PTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLG 192 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSH
T ss_pred HHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHH
Confidence 57889999999988 777665544455 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017066 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.++|+|+|++++++| +.+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lElGGk~p~IV~~d 270 (517)
T 3r31_A 193 ALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG-HLKHVTMELGGKSPMIVFDD 270 (517)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhc-CCCcEEEEcCCcCeEEEecC
Confidence 99999999999999999999999 78899999999999999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 271 ADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 271 ADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp SCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccC---CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017066 238 VDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
+++|+++++||...+ ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 999999999993121 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++++++|+|+||+.+...+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 9999999999999999998878899999999999999999999999999999998875
No 19
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.4e-85 Score=662.57 Aligned_cols=370 Identities=36% Similarity=0.577 Sum_probs=351.2
Q ss_pred HHHHHHHHHHH-HhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+ ++...++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 138 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 138 AIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 57889999998 66677766654456778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCC------CCcceeecCCCCcEEE
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN------LKPVTLELGGKSPFIV 154 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~------~~~v~~e~gG~~~~iV 154 (378)
|++++.++|+|+|++++++|++.++++.|++||++|.|.||||+.+|+.|++.+++ + +||+++|+|||||+||
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~~~~~~~lkpv~lELGGk~p~IV 296 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV-VRPGQNHLKRVIVEMGGKDTVVV 296 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS-CCTTCCSCCEEEEECCCCCEEEE
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh-ccccccccccEEEecCCCCceEE
Confidence 99999999999999999999888899999999999999999999999999999886 5 8999999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017066 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|
T Consensus 297 ~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 297 DRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017066 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 377 ~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 455 (538)
T 3qan_A 377 EIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455 (538)
T ss_dssp HHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHH
Confidence 9999999 999999875447999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEc-CCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeCC
Q 017066 315 TANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN-~~~~~-~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++++++|+|+|| ++... .+.+||||+|+||+| +++|.+||++|++.|+|+++..
T Consensus 456 ~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 456 HIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred HHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 99999999999999999 55544 788999999999999 9999999999999999998863
No 20
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.7e-85 Score=655.65 Aligned_cols=369 Identities=35% Similarity=0.641 Sum_probs=349.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 108 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 187 (479)
T 2imp_A 108 TADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187 (479)
T ss_dssp HHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 46789999998887776653322 34567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
++++|.++|+|+|++++++|++.++++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 188 l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 188 FAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEEcCCcCeEEECCCCCH
Confidence 99999999999999999999777789999999999999999999999999999886 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCC-CCccccccCCHHHHHHHHHHHHHhhh
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-GGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.| +++++||+++.+++++++++|+++++
T Consensus 267 ~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 346 (479)
T 2imp_A 267 ELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVE 346 (479)
T ss_dssp HHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHH
Q 017066 240 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 240 ~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|+++++||+..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 347 ~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~ 426 (479)
T 2imp_A 347 EGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKA 426 (479)
T ss_dssp TTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHH
T ss_pred CCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 99999999975333689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017066 320 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 320 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 427 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 427 IKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999876678999999999999999999999999999999764
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.2e-85 Score=657.38 Aligned_cols=367 Identities=37% Similarity=0.661 Sum_probs=348.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 125 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 204 (495)
T 1wnd_A 125 IVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204 (495)
T ss_dssp HHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHH
Confidence 46789999999888776654422 34467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++ +|+|++++++|.+.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 205 l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl 282 (495)
T 1wnd_A 205 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADI 282 (495)
T ss_dssp HHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh-cCCccccccCCCCeEEECCcCCH
Confidence 99999999 99999999999777889999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 283 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 362 (495)
T 1wnd_A 283 EAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 362 (495)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CeEeeCCc-ccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 241 G-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 241 g-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
| +++++||+ ... .|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+++++
T Consensus 363 G~a~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 441 (495)
T 1wnd_A 363 GHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 441 (495)
T ss_dssp SSCEEEECCSBCSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHH
T ss_pred CCeEEEECCcccCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 9 99999997 432 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017066 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++|+|+||+++...+.+||||+|.||+|+++|.+||++|++.|+|+++
T Consensus 442 ~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 442 VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999877778999999999999999999999999999999875
No 22
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=9.7e-86 Score=659.65 Aligned_cols=365 Identities=37% Similarity=0.532 Sum_probs=345.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC--C----CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCCh
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 75 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~ 75 (378)
+++.++|++.+++++.++..+.. . +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 113 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp 192 (505)
T 3prl_A 113 TADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGS 192 (505)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTH
T ss_pred HHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 56789999999988776543321 1 45678899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+++.+|++++.++|+|+|++++++|.+.++++.|++||++|.|.||||+.+|+.|++.++ ++|+++|+|||||+||+
T Consensus 193 ~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~ 269 (505)
T 3prl_A 193 LSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVL 269 (505)
T ss_dssp HHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEEC
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccC
Confidence 999999999999999999999999988889999999999999999999999999998865 78999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017066 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|. +++++||+++.+++++++++|+
T Consensus 270 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~ 348 (505)
T 3prl_A 270 DDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLID 348 (505)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++|+++++||+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 349 ~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 425 (505)
T 3prl_A 349 DALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDR 425 (505)
T ss_dssp HHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHH
T ss_pred HHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHH
Confidence 999999999999974 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 316 ANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
++++++++++|+|+||++.. ..+.+||||+|+||+|+++|.+|+++|++.|+|+++..
T Consensus 426 a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 426 AINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp HHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCC
Confidence 99999999999999999865 46889999999999999999999999999999998864
No 23
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.8e-85 Score=654.56 Aligned_cols=371 Identities=44% Similarity=0.759 Sum_probs=353.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l 188 (490)
T 2ve5_A 109 GADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188 (490)
T ss_dssp HHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH
Confidence 56789999999988766654434566789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHH-hcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA-AKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~-~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
++++.++|+|+|+++++++.+.+.++.|++||++|.|.||||+.+|+.|++.+ ++ +++|+++|+|||||+||++|||+
T Consensus 189 ~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~-~l~~v~lElGGk~p~iV~~dADl 267 (490)
T 2ve5_A 189 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS-SLKEVTMELGGKSPLIIFPDADL 267 (490)
T ss_dssp HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH-HCCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhc-cccceEEEcCCCceeEECCCCCH
Confidence 99999999999999999998888999999999999999999999999999998 66 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 268 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~ 347 (490)
T 2ve5_A 268 DRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQ 347 (490)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC----CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017066 241 GAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 241 ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 348 Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 427 (490)
T 2ve5_A 348 KARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARA 427 (490)
T ss_dssp TCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHH
T ss_pred CCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 999999997632 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 317 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++++|.|+||+++...+.+||||+|+||+|+++|.+++++|++.|+|+++..
T Consensus 428 ~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~~ 484 (490)
T 2ve5_A 428 HRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp HHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEccC
Confidence 999999999999999988778899999999999999999999999999999998864
No 24
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=7.5e-85 Score=649.02 Aligned_cols=369 Identities=31% Similarity=0.497 Sum_probs=350.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.+.......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 93 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l 172 (462)
T 3etf_A 93 SAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMI 172 (462)
T ss_dssp HHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 46789999999988776653333456688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
.++|.++|+|+|+++++++ +.+.+..|++||+++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 173 ~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 173 ARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCccEECCCCCHH
Confidence 9999999999999999998 45778899999999999999999999999999887 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++.++++++++++++++++|
T Consensus 251 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 330 (462)
T 3etf_A 251 LAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEG 330 (462)
T ss_dssp HHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHH
Q 017066 242 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 321 (378)
Q Consensus 242 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 321 (378)
+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 331 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~ 410 (462)
T 3etf_A 331 ARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAA 410 (462)
T ss_dssp CEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHH
T ss_pred CEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 99999998655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 322 ALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 322 ~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+|.++.
T Consensus 411 ~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 411 RLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred hCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999999998877889999999999999999999999999999998763
No 25
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.1e-84 Score=650.79 Aligned_cols=364 Identities=37% Similarity=0.606 Sum_probs=340.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeee-eeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++...+........ ..+...++. ++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 128 ~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 206 (497)
T 3i44_A 128 GSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAML 206 (497)
T ss_dssp HHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHH
Confidence 456778888776554332221 124456788 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++|++++++.++++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||
T Consensus 207 l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD- 284 (497)
T 3i44_A 207 FAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD- 284 (497)
T ss_dssp HHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-
T ss_pred HHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-
Confidence 99999999999999999999888899999999999999999999999999999887 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhC
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 240 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 240 (378)
+.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++
T Consensus 285 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (497)
T 3i44_A 285 IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDE 364 (497)
T ss_dssp TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCc-ccC--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017066 241 GAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 241 ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 365 Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 444 (497)
T 3i44_A 365 GATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCR 444 (497)
T ss_dssp TCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred CCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHH
Confidence 999999994 322 26999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017066 318 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
++++++++|+|+||. ....+.+||||+|.||+|+++|.+||++|++.|+|+
T Consensus 445 ~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 445 RIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 999999999999995 555688999999999999999999999999999885
No 26
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.6e-85 Score=657.33 Aligned_cols=371 Identities=28% Similarity=0.454 Sum_probs=348.4
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++.+.++..+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 128 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~ 207 (521)
T 4e4g_A 128 GLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIR 207 (521)
T ss_dssp HHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 567899999988877765433 2235568899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++|+ .+.++.|++||++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+
T Consensus 208 l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl 285 (521)
T 4e4g_A 208 LAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADL 285 (521)
T ss_dssp HHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCH
Confidence 999999999999999999994 5567999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++++
T Consensus 286 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 286 DQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCccc----CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 240 GGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 240 ~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+|+++++||... ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 999999999752 2468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEeCCC
Q 017066 316 ANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTALKN 374 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~~~~ 374 (378)
++++++++++|.|+||++... .+.+||||+|.||+| +++|.+||++|++.|+|+++++.
T Consensus 446 a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~~ 507 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWPS 507 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECCCC
T ss_pred HHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEecCc
Confidence 999999999999999997654 478999999999999 79999999999999999998754
No 27
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.9e-85 Score=653.56 Aligned_cols=369 Identities=38% Similarity=0.606 Sum_probs=350.1
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.++++..++..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 112 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 191 (487)
T 2w8n_A 112 SAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALA 191 (487)
T ss_dssp HHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 5678999999998877765443 245567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEe---CCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017066 81 VSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~---~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+++++.++|+|+|++|+++ |.+.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 192 l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 192 LAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN-SVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT-TTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEecCCCCeEEECCC
Confidence 9999999999999999999 7667789999999999999999999999999999886 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhh-cccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
||++.|++.+++++|.|+||.|++++++|||++++|+|+++|.+++++ +++|+|.|+++++||+++.+++++++++|++
T Consensus 271 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 350 (487)
T 2w8n_A 271 ANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350 (487)
T ss_dssp SCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCe-eeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 237 GVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
++++|+++++||+... .|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 351 a~~~Ga~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 351 AVSKGATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHTTTCEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHCCCEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 9999999999997642 588 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 316 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|++.++.
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~~ 486 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGG 486 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEECC
T ss_pred HHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEec
Confidence 999999999999999998777788999999999999999999999999999998753
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1e-84 Score=649.48 Aligned_cols=362 Identities=33% Similarity=0.584 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++++.++..+.. +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 176 (486)
T 3pqa_A 98 SIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIEL 176 (486)
T ss_dssp HHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHH
Confidence 46789999999998877665543 56789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc----CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017066 82 SKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 82 ~~~l~~a----glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
++++.++ |+|+|++++++|++.++++.|++||++|.|.||||+.+|+.|++.++ +||+++|+|||||+||++|
T Consensus 177 ~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~d 253 (486)
T 3pqa_A 177 AKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKD 253 (486)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCC
Confidence 9999999 99999999999988888999999999999999999999999998765 7899999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|+|+++++||+++.+++++++++|+++
T Consensus 254 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 333 (486)
T 3pqa_A 254 ADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKA 333 (486)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017066 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.++++
T Consensus 334 ~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~ 408 (486)
T 3pqa_A 334 IDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSL 408 (486)
T ss_dssp HHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHH
T ss_pred HHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHH
Confidence 9999999999975 5899999999 9999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 318 TLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++|+|+||+++.. .+.+||||+|+||+|+++|.+||++|++.|+|+++.
T Consensus 409 ~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 409 KFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 9999999999999998653 458999999999999999999999999999999885
No 29
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.3e-84 Score=651.48 Aligned_cols=364 Identities=31% Similarity=0.488 Sum_probs=345.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CC--CcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChh
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 76 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~ 76 (378)
+++.++|++.+++++.++..+. .. +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 119 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 119 AVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 5678899999988877665433 22 336789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017066 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
++.++++++.++|+|+|++++++|.+ ++++.|++||++|.|.||||+.+|+.|++.++ ++|+++|+|||||+||++
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~ 274 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLE 274 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECC
Confidence 99999999999999999999999976 88999999999999999999999999998876 789999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017066 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++
T Consensus 275 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~ 354 (501)
T 1uxt_A 275 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 354 (501)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCC-eeeeceeeccCC---CcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCC
Q 017066 237 GVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 312 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 312 (378)
++++|+++++||+. .| +|++|||+.+++ ++|.+++||+||||++|++|+|+|||++++|+++|||++||||+|
T Consensus 355 a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 431 (501)
T 1uxt_A 355 AVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRD 431 (501)
T ss_dssp HHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCC
T ss_pred HHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCC
Confidence 99999999999975 57 999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcceeEEEEcCC-CCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 313 LDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 313 ~~~~~~~~~~l~~g~v~vN~~-~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+|+++|++.|+++++.
T Consensus 432 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 432 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp HHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred HHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 999999999999999999998 556788999999999999999999999999999999875
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.3e-84 Score=649.96 Aligned_cols=373 Identities=34% Similarity=0.562 Sum_probs=332.4
Q ss_pred HHHHHHHHHHHHhhhcCccCCC--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH-
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA- 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~- 78 (378)
+++.++|++.++++..+ ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 114 ~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 114 AGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 46778899988877665 4332 2356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-CCCcceeecCCCCcEEEcCC
Q 017066 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-~~~~v~~e~gG~~~~iV~~d 157 (378)
.++.+++.++|+|+|++++++|++.+.++.|++||++|.|.||||+.+|+.|++.+++. +++|+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 99999999999999999999997788999999999999999999999999999987741 57999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+++
T Consensus 273 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 352 (508)
T 3r64_A 273 ADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELA 352 (508)
T ss_dssp SCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHH
Q 017066 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 317 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~ 317 (378)
+++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.++++
T Consensus 353 ~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 353 KKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 9999999999975 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC-----CCCCCC
Q 017066 318 TLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL-----KNPAWL 378 (378)
Q Consensus 318 ~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~-----~~~~~~ 378 (378)
++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+|+++|++.|+|+++. ..+.||
T Consensus 430 ~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp HHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEECCSTTCCCC---
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccchhcchhhc
Confidence 9999999999999998654 688999999999999999999999999999999885 467775
No 31
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.2e-83 Score=646.95 Aligned_cols=368 Identities=34% Similarity=0.553 Sum_probs=344.7
Q ss_pred HHHHHHHHHHHHhhhcCccCC--CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++||+.+++++.+...+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 138 AIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 567899999999888776532 223456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEE
Q 017066 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV 154 (378)
.+++++.++|+|+|++++++|.+.++++.|++||++|.|+||||+.+|+.|++.+++ .+++|+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999999999999999777889999999999999999999999999998871 378999999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017066 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+| ++++++||+++.+++++++++|
T Consensus 298 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017066 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 377 ~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~ 455 (516)
T 1uzb_A 377 EIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKRE 455 (516)
T ss_dssp HHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHH
T ss_pred HHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 9999998 899999753346899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 017066 315 TANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++++|.|+||+... ..+.+||||+|.||+| +++|.+++++|++.|+|+++
T Consensus 456 ~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 456 HLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999998643 3578999999999999 57999999999999999875
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=8.8e-84 Score=645.68 Aligned_cols=369 Identities=29% Similarity=0.507 Sum_probs=344.6
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++++.++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 123 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 202 (500)
T 2j6l_A 123 YVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202 (500)
T ss_dssp HHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHH
Confidence 46788999998887776654432 34456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----HcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcC
Q 017066 81 VSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 156 (378)
Q Consensus 81 l~~~l~----~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~ 156 (378)
+++++. ++|+|+|++++++| +.++++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 203 l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~-~l~~v~lELGGk~p~iV~~ 280 (500)
T 2j6l_A 203 VTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE-RFGRSLLELGGNNAIIAFE 280 (500)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhcc-CCCceEEEcCCCCceEECC
Confidence 888866 46999999999999 77889999999999999999999999999999887 7899999999999999999
Q ss_pred CcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHH
Q 017066 157 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 236 (378)
Q Consensus 157 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 236 (378)
|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++
T Consensus 281 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 281 DADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp TCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHH
Q 017066 237 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 237 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~ 316 (378)
++++|+++++||+..+..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 99999999999976444689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--HHcceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 317 NTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 317 ~~~~--~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+++++.
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred HHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEeC
Confidence 9999 679999999998654 3467899999999999999999999999999998863
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=5.1e-84 Score=644.46 Aligned_cols=364 Identities=35% Similarity=0.522 Sum_probs=343.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CC----cce-eeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCCh
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 75 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~ 75 (378)
+++.++|++.+++++.++..+.. .+ ... +..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 104 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp 183 (475)
T 1euh_A 104 TAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183 (475)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcCh
Confidence 56889999999888766543322 23 356 8999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEc
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~ 155 (378)
+++.+++++|.++|+|+|++++++|.+.+.++.|++||++|.|.||||+++|+.|++.++ ++|+++|+|||||+||+
T Consensus 184 ~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEEC
Confidence 999999999999999999999999977778999999999999999999999999998765 78999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017066 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.| ++++||+++.+++++++++++
T Consensus 261 ~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++|+++++||+. .|+|++|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.++
T Consensus 340 ~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~ 416 (475)
T 1euh_A 340 DANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPR 416 (475)
T ss_dssp HHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHH
T ss_pred HHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHH
Confidence 999999999999975 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcC-CCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 316 ANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~-~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|.|+||+ +....+.+||||+|+||+|+++|.+|+++|++.|++++++
T Consensus 417 ~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 417 AFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence 99999999999999999 6555788999999999999999999999999999998874
No 34
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7.6e-84 Score=645.10 Aligned_cols=368 Identities=32% Similarity=0.522 Sum_probs=327.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC--CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH-
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA- 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~- 78 (378)
+++.++|++.+++++.++..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 108 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 108 TIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 5678999999998877766543 2356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017066 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.++.++|.++|+|+|+++++++++.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dA 266 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR-AFKRMALELGGNNPFAVLSDA 266 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH-HTCEEEEEECCCEEEEECTTS
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh-hccchhhhcCCCCceEEcCCC
Confidence 9999999999999999999999877899999999999999999999999999999887 789999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017066 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++..+++++++++++++
T Consensus 267 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 267 DVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp CHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++||++||||+|.+++++
T Consensus 347 ~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 423 (485)
T 4dng_A 347 TDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423 (485)
T ss_dssp HTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 999999999975 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 319 LMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
+++++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.|++.+++.
T Consensus 424 ~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 479 (485)
T 4dng_A 424 FALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQ 479 (485)
T ss_dssp HHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC-
T ss_pred HHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecC
Confidence 999999999999998654 6889999999999999999999999999999998864
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2e-83 Score=641.47 Aligned_cols=373 Identities=31% Similarity=0.489 Sum_probs=348.3
Q ss_pred HHHHHHHHHHHHhhhcCccCC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
+++.++|++.+++...++..+ ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+
T Consensus 107 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 186 (486)
T 1t90_A 107 GIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEK 186 (486)
T ss_dssp HHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 467789998877777665433 1234567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCH
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 160 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl 160 (378)
+++++.++|+|+|++++++| +.+.+..|++||++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+
T Consensus 187 l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl 264 (486)
T 1t90_A 187 LVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANL 264 (486)
T ss_dssp HHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc-cCCcEEeccCCCCcEEECCCCCH
Confidence 99999999999999999998 56789999999999999999999999999999887 78999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCe-EEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
+.|++.+++++|.|+||.|++++| +|||++ +|+|+++|.++++++++|+|.++++++||+++..++++++++++++++
T Consensus 265 ~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 265 EDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 240 GGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 240 ~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 9999999997432 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEEeCCCCCC
Q 017066 319 LMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVTALKNPAW 377 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g~~~l~~~~~~k~~~~~~~~~~~ 377 (378)
+++++++|+|+||+.... .+.+||||+|+||+| +++|.+|+++|++.|++..++.+|..
T Consensus 424 ~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~ 485 (486)
T 1t90_A 424 FRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPDF 485 (486)
T ss_dssp HHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCCCCC
T ss_pred HHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCCCCC
Confidence 999999999999986433 578999999999999 89999999999999999999877753
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-83 Score=641.73 Aligned_cols=363 Identities=39% Similarity=0.676 Sum_probs=321.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++++++++.++.. +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 110 ~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 185 (478)
T 3ty7_A 110 GLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVIL 185 (478)
T ss_dssp HHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHH
Confidence 46788999999888766432 23578999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 161 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~ 161 (378)
++++.++|+|+|+++++++++.++++.|+.||++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++
T Consensus 186 ~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~ 264 (478)
T 3ty7_A 186 AEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIK 264 (478)
T ss_dssp HHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT-TTCEEECCCCCCCEEEECTTSCHH
T ss_pred HHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh-cCCceEEecCCCCCcccCCCCCHH
Confidence 9999999999999999999888899999999999999999999999999998876 789999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCC
Q 017066 162 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 241 (378)
Q Consensus 162 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 241 (378)
.|++.+++++|.|+||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|++++++|
T Consensus 265 ~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 344 (478)
T 3ty7_A 265 EAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEG 344 (478)
T ss_dssp HHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCccc-C--CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 242 AKLETGGERL-G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 242 a~~~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 345 a~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 424 (478)
T 3ty7_A 345 AELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHK 424 (478)
T ss_dssp CEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHH
T ss_pred CEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 9999999432 2 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 017066 319 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 370 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~ 370 (378)
+++++++|+|+||+ +...+.+||||+|+||+|+++|.+||++||+.|+|+.
T Consensus 425 ~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 425 VARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 99999999999999 6667889999999999999999999999999999974
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.4e-82 Score=638.64 Aligned_cols=375 Identities=28% Similarity=0.419 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC-CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
++++++|++.+++++.+...... .+...+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.+
T Consensus 166 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~ 244 (563)
T 4e3x_A 166 LIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYA 244 (563)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHH
Confidence 57899999999999887543322 234457778889999999999999999999999999 6999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCC------cceeecCCCCcEEE
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFIV 154 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~------~v~~e~gG~~~~iV 154 (378)
++++|.++|+|+|++|+|+|++.++++.|++||+++.|.||||+.+|+.|++.+++ +++ |+++|+|||||+||
T Consensus 245 l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p~IV 323 (563)
T 4e3x_A 245 VYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNFHFV 323 (563)
T ss_dssp HHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh-hCCccccCCceeccCCCCCceee
Confidence 99999999999999999999888899999999999999999999999999999887 566 49999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCC-CCCCccccccCCHHHHHHHHHH
Q 017066 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+| .|+++++||+++.+++++++++
T Consensus 324 ~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~ 403 (563)
T 4e3x_A 324 HSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKW 403 (563)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHhhh-CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHH-HcCCCCceEEEe
Q 017066 234 IRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGVF 309 (378)
Q Consensus 234 i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~ 309 (378)
|+++++ +|+++++||+.+...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++||
T Consensus 404 i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~ 483 (563)
T 4e3x_A 404 LEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVF 483 (563)
T ss_dssp HHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEE
T ss_pred HHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEE
Confidence 999996 89999999987666799999999999999999999999999999999996 79999999 789999999999
Q ss_pred cCCHHHHHHHHHHcc--eeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC--CCCCCC
Q 017066 310 THNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL--KNPAWL 378 (378)
Q Consensus 310 s~d~~~~~~~~~~l~--~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~--~~~~~~ 378 (378)
|+|.+++++++++++ +|+|+||+.+.. .+.+||||+|.||+| +++|.++|++|++.|+|..+. ++++|+
T Consensus 484 t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~~~~~~~y 559 (563)
T 4e3x_A 484 AQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRY 559 (563)
T ss_dssp CSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECSCCCCSSC
T ss_pred eCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCcCCCcccC
Confidence 999999999999975 999999997643 578999999999998 899999999999999999886 344453
No 38
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.1e-82 Score=630.55 Aligned_cols=373 Identities=30% Similarity=0.452 Sum_probs=346.1
Q ss_pred HHHHHHHHHHHHhhhcCcc-CC-CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017066 2 TTRLFRYYAGWADKIQGLT-AP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
+++.++|++.++.++.... .. ...+......++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 91 FLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 4567888888887765433 22 223455677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcC
Q 017066 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 159 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dad 159 (378)
.+.+++.++|+|+|+++++++ +.+.+..|..| +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dAd 246 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELGGKDPAIVLESAN 246 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECCCCEEEEECTTSC
T ss_pred HHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCCCcCccccCchhh
Confidence 999999999999999999998 56778888876 8999999999999999999887 7899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhh
Q 017066 160 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 239 (378)
Q Consensus 160 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 239 (378)
++.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++|+|.++++++||+++..+++++.++++++++
T Consensus 247 l~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 326 (474)
T 4h7n_A 247 LELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVE 326 (474)
T ss_dssp HHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccC-CCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 240 GGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 240 ~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+|++++.||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 327 ~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~ 406 (474)
T 4h7n_A 327 KGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALK 406 (474)
T ss_dssp TTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHH
T ss_pred hCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHH
Confidence 9999999998643 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC---CCCCCC
Q 017066 319 LMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL---KNPAWL 378 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~---~~~~~~ 378 (378)
+++++++|+|+||+... ..+..||||+|.||+| +++|.+|+++|++.|+|.++. ..|+|+
T Consensus 407 ~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 407 VARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp HHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred HHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999998754 3578999999999998 788999999999999999985 578896
No 39
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.6e-81 Score=624.21 Aligned_cols=359 Identities=29% Similarity=0.424 Sum_probs=329.4
Q ss_pred HHHHHHHHHHHhhhcCccCC----CCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017066 3 TRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
++.++|++.....+...... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~ 163 (469)
T 3sza_A 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMA 163 (469)
T ss_dssp HHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHH
T ss_pred HHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 45567777665554332211 11244678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCc
Q 017066 79 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 158 (378)
Q Consensus 79 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~da 158 (378)
.++++++.++ +|+|++++++|. .+....|+.| ++|.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++||
T Consensus 164 ~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dA 239 (469)
T 3sza_A 164 SLLATIIPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNC 239 (469)
T ss_dssp HHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCC
Confidence 9999999998 999999999994 4455667777 89999999999999999999887 799999999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhh
Q 017066 159 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 159 dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
|++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++ .|+|.++++++||+++.+++++++++|
T Consensus 240 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i---- 314 (469)
T 3sza_A 240 DLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI---- 314 (469)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH----
Confidence 999999999999999999999999999999999999999999999988 599999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 315 -~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~ 392 (469)
T 3sza_A 315 -EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKK 392 (469)
T ss_dssp -TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHH
T ss_pred -cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHH
Confidence 589999999864 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 319 LMRALRVGSVWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~--~~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++|.|+||+.. ...+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 393 ~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 393 MIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp HHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred HHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 9999999999999975 34688999999999999999999999999999998874
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.3e-80 Score=656.96 Aligned_cols=370 Identities=32% Similarity=0.532 Sum_probs=349.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCC-CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 80 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~ 80 (378)
++++++||+.+++++.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..
T Consensus 632 aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~ 711 (1026)
T 4f9i_A 632 AIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711 (1026)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHH
Confidence 5789999999999887655332 356678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc-----CCCCcceeecCCCCcEEEc
Q 017066 81 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVC 155 (378)
Q Consensus 81 l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~-----~~~~~v~~e~gG~~~~iV~ 155 (378)
++++|.++|+|+|++|+|+|++.++++.|++||+++.|.||||+.+|+.|.+.++. ++++|+++|+|||||+||+
T Consensus 712 l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~ 791 (1026)
T 4f9i_A 712 LVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIID 791 (1026)
T ss_dssp HHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEEC
T ss_pred HHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEEC
Confidence 99999999999999999999888899999999999999999999999999998873 3679999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHH
Q 017066 156 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 235 (378)
Q Consensus 156 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 235 (378)
+|||++.|++.+++++|.++||.|++++++|||++++|+|+++|.++++++++|+|.|+++++||+++.+++++++++|+
T Consensus 792 ~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~ 871 (1026)
T 4f9i_A 792 DDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAE 871 (1026)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 236 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 236 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++++| ++++||..+...|+|+.|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 872 ~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~ 950 (1026)
T 4f9i_A 872 IGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEH 950 (1026)
T ss_dssp HHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHH
T ss_pred HHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHH
Confidence 999998 9999997655459999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017066 316 ANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||+.+.. .+.+||||+|.||+| +++|.++|++|++.|+|+++.
T Consensus 951 a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 951 LAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 999999999999999997653 478999999999999 578999999999999999885
No 41
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.1e-79 Score=610.36 Aligned_cols=357 Identities=28% Similarity=0.469 Sum_probs=331.1
Q ss_pred HHHHHHHHHHHHhhhcCcc-CCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhh
Q 017066 2 TTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 77 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~ 77 (378)
+++.++|++..++++.+.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 93 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 172 (457)
T 3lns_A 93 VLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPET 172 (457)
T ss_dssp HHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHH
T ss_pred HHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 4578899998888765432 221 134568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCC
Q 017066 78 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 78 ~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~d 157 (378)
+.++++++.++ +|+|++|+++| +.+.+..|++ +++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 173 ~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~d 248 (457)
T 3lns_A 173 SAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPD 248 (457)
T ss_dssp HHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCCCCCeECCC
Confidence 99999999999 99999999999 6788899998 789999999999999999999887 78999999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.+++++++ |.++ ++||+++.+++++++++|+++
T Consensus 249 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a 323 (457)
T 3lns_A 249 ADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT 323 (457)
T ss_dssp CCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987 6666 999999999999999999986
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHc-CCCCceEEEecCCHHHH
Q 017066 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAGVFTHNLDTA 316 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~s~d~~~~ 316 (378)
. +++++||.... .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+++
T Consensus 324 ~---~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a 399 (457)
T 3lns_A 324 Q---GQVLVGSQADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVA 399 (457)
T ss_dssp C---SEEEECCCEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHH
T ss_pred C---CeEEeCCccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHH
Confidence 3 59999997533 6899999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHcceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 017066 317 NTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 371 (378)
Q Consensus 317 ~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~ 371 (378)
+++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 400 ~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 400 KGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999743 468899999999999999999999999999999764
No 42
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.3e-80 Score=616.77 Aligned_cols=362 Identities=28% Similarity=0.388 Sum_probs=338.8
Q ss_pred HHHHHHHHHHHHhhhcCccCCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l 81 (378)
+++.++|++.+++.+.++..+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 185 (490)
T 3ju8_A 106 MVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELT 185 (490)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHH
Confidence 46788999998888777654322334567789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcc-eeecCCCCcEEEcCCcCH
Q 017066 82 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV-TLELGGKSPFIVCEDADV 160 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v-~~e~gG~~~~iV~~dadl 160 (378)
++++.++|+|+|+++++++ +.+.++.|++||++|.|.||||+.+|+.|++.+++ +++|+ ++|+|||||+||++|||+
T Consensus 186 ~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 186 LKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-QPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-CTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-cCCCcEEeecCCCCeEEECCCCCH
Confidence 9999999999999999999 67889999999999999999999999999998886 78898 799999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCeEEEeccc-hHHHHHHHHHHHhhcccCC-CCCCCccccccCCHHHHHHHHHHHHHhh
Q 017066 161 DKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGGIQQGPQIDSEQFEKILKYIRSGV 238 (378)
Q Consensus 161 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 238 (378)
+.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|.++++++++|+ |.|+++++||+++.+++++++++|++++
T Consensus 264 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~ 343 (490)
T 3ju8_A 264 DAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLI 343 (490)
T ss_dssp HHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 9999999999999999999 9999999999999999999999999999
Q ss_pred hCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHH
Q 017066 239 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 318 (378)
Q Consensus 239 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~ 318 (378)
++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+++++
T Consensus 344 ~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~ 422 (490)
T 3ju8_A 344 GKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQ 422 (490)
T ss_dssp HTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHH
Confidence 99999999997655679999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 319 LMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 319 ~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++|+|+||++... .+.+||||+|.||++ ++++|++.|+|+++.
T Consensus 423 ~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 423 FLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999997653 578999999999974 589999999998774
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=8.8e-79 Score=614.45 Aligned_cols=366 Identities=25% Similarity=0.350 Sum_probs=329.1
Q ss_pred HHHHHHHHHHHHhhhcCc-------cCCCC-CC-cceeeeeeec-eEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCC
Q 017066 2 TTRLFRYYAGWADKIQGL-------TAPAD-GP-YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 71 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps 71 (378)
+++.++||+.+++++.+. ..+.. .+ ...+..++|+ |||++|+|||||+...++++++||++||+||+|||
T Consensus 108 ~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs 187 (534)
T 2y53_A 108 GIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187 (534)
T ss_dssp HHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 467789999988776432 11211 12 2457889997 99999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHh-cCCCCcceeecCCC
Q 017066 72 EQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGK 149 (378)
Q Consensus 72 ~~~~~~~~~l~~~l~~ag-lP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~-~~~~~~v~~e~gG~ 149 (378)
+.+|+++..+++++.++| +|+|++|+|+|.+.++...+ +++|.|.||||+.+|+.|++.++ ..++||+++|+|||
T Consensus 188 ~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk 264 (534)
T 2y53_A 188 TATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSL 264 (534)
T ss_dssp GGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCC
T ss_pred CcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCC
Confidence 999999999999999999 89999999998654433332 57999999999999999998764 23789999999999
Q ss_pred CcEEEcCCc-----CHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCH
Q 017066 150 SPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 224 (378)
Q Consensus 150 ~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~ 224 (378)
||+||++|| |++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.|+++++||+++.
T Consensus 265 ~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred CeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhCCCeEeeCCcccC------CCCeeeeceeeccCCCc--ccccccccccceEEeeecC---CH---
Q 017066 225 EQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK---DL--- 290 (378)
Q Consensus 225 ~~~~~~~~~i~~a~~~ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~--- 290 (378)
+++++++++|+++ .+|+++++||+... ..|+|++|||+.+++++ |.+++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~ 423 (534)
T 2y53_A 345 EQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNAL 423 (534)
T ss_dssp HHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---C
T ss_pred HHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccC
Confidence 9999999999999 68999999987421 35899999999999887 6899999999999999999 99
Q ss_pred --HHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc--ceeEEEEcCCCC---------CCCCCCccCCCCCCCCCc-chH
Q 017066 291 --DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------FDAAIPFGGYKQSGQGRE-KGS 356 (378)
Q Consensus 291 --~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v~vN~~~~---------~~~~~pfgG~~~sG~g~~-~g~ 356 (378)
||||+++|+++|||++||||+|.++++++++++ ++|+|+||++.. ..+.+||||+|+||+|++ +|.
T Consensus 424 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~ 503 (534)
T 2y53_A 424 PEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGL 503 (534)
T ss_dssp TTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGG
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchH
Confidence 999999999999999999999999999999999 899999998642 357899999999999999 699
Q ss_pred HHHHhhhhceEEEEe
Q 017066 357 YSLSNYLQVKAVVTA 371 (378)
Q Consensus 357 ~~l~~~~~~k~~~~~ 371 (378)
+++++|++.|++...
T Consensus 504 ~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 504 RALAFYHRRSAIQAA 518 (534)
T ss_dssp GGGGGGEEEEEEEEE
T ss_pred HHHHHHhhhheeecC
Confidence 999999999998765
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.7e-77 Score=634.82 Aligned_cols=365 Identities=30% Similarity=0.467 Sum_probs=341.6
Q ss_pred HHHHHHHHHHHHhhhcCcc--CCCCCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHH
Q 017066 2 TTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 79 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~ 79 (378)
++++++||+.+++++.+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.
T Consensus 614 ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~ 693 (1001)
T 3haz_A 614 AADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAR 693 (1001)
T ss_dssp HHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHH
Confidence 5789999999999877653 34455677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC--CCCcceeecCCCCcEEEcCC
Q 017066 80 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCED 157 (378)
Q Consensus 80 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~--~~~~v~~e~gG~~~~iV~~d 157 (378)
.+++++.++|+|+|++|+++|++.+ +..|++||+||.|+||||+.+|+.|.+.++++ +++|+++|+|||||+||++|
T Consensus 694 ~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~d 772 (1001)
T 3haz_A 694 EAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADAT 772 (1001)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCC
Confidence 9999999999999999999998777 99999999999999999999999999988863 47899999999999999999
Q ss_pred cCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHh
Q 017066 158 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 237 (378)
Q Consensus 158 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 237 (378)
||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++.+++++++++|+++
T Consensus 773 ADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a 852 (1001)
T 3haz_A 773 ALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM 852 (1001)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCC--HHHHHHHHHcCCCCceEEEecCCHHH
Q 017066 238 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDT 315 (378)
Q Consensus 238 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~ 315 (378)
+++| ++ +||.... .|+|+.|||+.+ +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.++
T Consensus 853 ~~~g-~v-~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~ 927 (1001)
T 3haz_A 853 KTEA-RL-HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDS 927 (1001)
T ss_dssp HHHS-EE-EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHH
T ss_pred HhcC-eE-eccccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHH
Confidence 9888 88 8887543 599999999974 6788999999999999999996 79999999999999999999999999
Q ss_pred HHHHHHHcceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 017066 316 ANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 316 ~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++|+|+||+.... .+.+||||+|.||+| +++|.++|++|++.|+|+++.
T Consensus 928 a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 928 IEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999999999997653 367899999999999 578999999999999999875
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=6.3e-74 Score=576.04 Aligned_cols=353 Identities=20% Similarity=0.308 Sum_probs=317.6
Q ss_pred HHHHHHHHHHHHhh--hcCccC----CC--CCC-cceeeeeeeceEEEEEcCCCcchHHH--HHhhhchhccCCeEEEeC
Q 017066 2 TTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+.++++ ..+... +. +.+ ...+++++|+|||++|+|||||+... ++++++||++||+||+||
T Consensus 94 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKp 173 (510)
T 1ez0_A 94 TANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKG 173 (510)
T ss_dssp HHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEEC
Confidence 46789999998876 433321 11 112 13578999999999999999999874 499999999999999999
Q ss_pred CCCChhhHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC--Cccee
Q 017066 71 AEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTL 144 (378)
Q Consensus 71 s~~~~~~~~~l~~~l----~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~--~~v~~ 144 (378)
|+.+|+++.++++++ .++|+|+|++++++|.+.+.++.|++||++|.|+||||+.+|+.|++.+++ ++ +|+++
T Consensus 174 s~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~l~~~pv~l 252 (510)
T 1ez0_A 174 HTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE-RPEPIPFYG 252 (510)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc-cCCCccEEE
Confidence 999999999999998 567999999999999777889999999999999999999999999999887 54 99999
Q ss_pred ecCCCCcEEEcCCcCHH--HHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCcccccc
Q 017066 145 ELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 221 (378)
Q Consensus 145 e~gG~~~~iV~~dadl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl 221 (378)
|+|||||+||++|||++ .|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++ ||+
T Consensus 253 ELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~ 322 (510)
T 1ez0_A 253 ELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STL 322 (510)
T ss_dssp ECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCC
T ss_pred ECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCC
Confidence 99999999999999999 99999999999999999999999999999 999999999999998864 678
Q ss_pred CCHHHHHHHHHHHHHhhh-CCCeEeeCCcccCCCCeeeeceeeccCCCc---ccccccccccceEEeeecCCHHHHHHHH
Q 017066 222 IDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRS 297 (378)
Q Consensus 222 ~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~ 297 (378)
+++.+.+++.++++++++ +|+++++||. .|+|+.|||+.+++++ |.+++||+||||++|++|+|+||||+++
T Consensus 323 ~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~a 398 (510)
T 1ez0_A 323 LTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLS 398 (510)
T ss_dssp SSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHH
Confidence 888899999999999984 7999999997 2899999999887777 9999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCH--HHHHHHHHHc--ceeEEEEcCCCC---CCCCCCccC-CCCCCCCC--cchHHHHHhhhhceE
Q 017066 298 NASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQGR--EKGSYSLSNYLQVKA 367 (378)
Q Consensus 298 n~~~~gl~~~v~s~d~--~~~~~~~~~l--~~g~v~vN~~~~---~~~~~pfgG-~~~sG~g~--~~g~~~l~~~~~~k~ 367 (378)
|+++|||++||||+|. ++++++++++ ++|+|+||++.. ..+.+|||| +|.||+|+ ++|.+||++|++.|+
T Consensus 399 N~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~ 478 (510)
T 1ez0_A 399 EMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVA 478 (510)
T ss_dssp HTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEE
T ss_pred hcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEE
Confidence 9999999999999987 7899999999 799999999764 357899999 79999885 479999999999887
Q ss_pred EE
Q 017066 368 VV 369 (378)
Q Consensus 368 ~~ 369 (378)
+.
T Consensus 479 ~~ 480 (510)
T 1ez0_A 479 YQ 480 (510)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 46
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.8e-74 Score=580.82 Aligned_cols=354 Identities=23% Similarity=0.328 Sum_probs=318.6
Q ss_pred HHHHHHHHHHHHhhh--cCccC----CC---CCCcceeeeeeeceEEEEEcCCCcchHHHH--HhhhchhccCCeEEEeC
Q 017066 2 TTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKT 70 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~--~~~~~----~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~~~~AL~~Gn~vvlkp 70 (378)
+++.++||+..+++. .+... +. ..+...++.++|+|||++|+|||||+...+ +++++||++||+||+||
T Consensus 127 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKp 206 (528)
T 3v4c_A 127 TTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKG 206 (528)
T ss_dssp HHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEEC
Confidence 567899999998872 22221 11 123456889999999999999999998754 89999999999999999
Q ss_pred CCCChhhHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCC--Cccee
Q 017066 71 AEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTL 144 (378)
Q Consensus 71 s~~~~~~~~~l~~~l----~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~--~~v~~ 144 (378)
|+.+|+++.++++++ .++|+|+|++|++++.+.+.++.|++||++|.|.||||+.+|+.|++.+++ ++ +|+++
T Consensus 207 s~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~-~~~~~pv~l 285 (528)
T 3v4c_A 207 HSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAA-RPEPIPFFG 285 (528)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEE
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhh-ccCCCceEE
Confidence 999999999998875 468999999999999888899999999999999999999999999999887 67 89999
Q ss_pred ecCCCCcEEEcCCc---CHHHHHHHHHHHHhhcCCCcccCCCeEEEecc-chHHHHHHHHHHHhhcccCCCCCCCccccc
Q 017066 145 ELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGP 220 (378)
Q Consensus 145 e~gG~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gp 220 (378)
|+|||||+||++|| |++.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|++++++++.| +.+||
T Consensus 286 ElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp 359 (528)
T 3v4c_A 286 ELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTD 359 (528)
T ss_dssp ECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCH
T ss_pred ecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCH
Confidence 99999999999999 88999999999999999999999999999997 9999999999999988654 57899
Q ss_pred cCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCc---ccccccccccceEEeeecCCHHHHHHHH
Q 017066 221 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRS 297 (378)
Q Consensus 221 l~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~ 297 (378)
+++....+++.++++ ++|+++++||+. .|+|+.|||+.+++++ |.+++||+||||++|++|+|+||||+++
T Consensus 360 ~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~a 433 (528)
T 3v4c_A 360 GIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELA 433 (528)
T ss_dssp HHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHH
Confidence 998888888777764 479999999975 6899999999988777 8999999999999999999999999999
Q ss_pred HcCCCCceEEEecC--CHHHHHHHHHHcc--eeEEEEcCCCC---CCCCCCccC-CCCCCCCCcc--hHHHHHhhhhceE
Q 017066 298 NASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPFGG-YKQSGQGREK--GSYSLSNYLQVKA 367 (378)
Q Consensus 298 n~~~~gl~~~v~s~--d~~~~~~~~~~l~--~g~v~vN~~~~---~~~~~pfgG-~~~sG~g~~~--g~~~l~~~~~~k~ 367 (378)
|+++|||+++|||+ |.+++++++++++ +|+|+||+++. ..+.+|||| +|.||+|+++ |.+|+++|+++|+
T Consensus 434 N~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~ 513 (528)
T 3v4c_A 434 RGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVA 513 (528)
T ss_dssp HHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEE
T ss_pred hcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHH
Confidence 99999999999999 8899999999997 99999999765 358899999 9999999975 9999999999987
Q ss_pred E
Q 017066 368 V 368 (378)
Q Consensus 368 ~ 368 (378)
+
T Consensus 514 ~ 514 (528)
T 3v4c_A 514 Y 514 (528)
T ss_dssp E
T ss_pred h
Confidence 5
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2.6e-70 Score=543.27 Aligned_cols=331 Identities=17% Similarity=0.180 Sum_probs=264.4
Q ss_pred HHHHHHHHHHHHhhhc------CccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCC
Q 017066 2 TTRLFRYYAGWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 72 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~ 72 (378)
+++.++|++++++.+. ++..+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+
T Consensus 84 ~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~ 161 (468)
T 1vlu_A 84 KGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGK 161 (468)
T ss_dssp STTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCG
T ss_pred hHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCC
Confidence 3467889998888776 333221 12445689999999999999999 9 89999999999999999999999
Q ss_pred CChhhHHHHHHHHH----H----cCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCccee
Q 017066 73 QTPLSALYVSKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 144 (378)
Q Consensus 73 ~~~~~~~~l~~~l~----~----aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~ 144 (378)
.+|+++..+++++. + +|+|+|++|+++ +++++++.|.+||++|.|.||||+.+|+.|++.+ +||+++
T Consensus 162 ~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~l 236 (468)
T 1vlu_A 162 ESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLG 236 (468)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTT
T ss_pred ccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEe
Confidence 99999999999995 8 999999999999 6667899999999999999999999999998764 689999
Q ss_pred ecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhccc---CCCCCCCcccccc
Q 017066 145 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQ 221 (378)
Q Consensus 145 e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl 221 (378)
|+|||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++ |+|+++|.++++++++ |+|.+
T Consensus 237 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-------- 306 (468)
T 1vlu_A 237 HADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-------- 306 (468)
T ss_dssp BCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH--------
T ss_pred ecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH--------
Confidence 99999999999999999999999999999999 99999999999999 9999999999999987 77532
Q ss_pred CCHHHHHHHHHH-HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcC
Q 017066 222 IDSEQFEKILKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 300 (378)
Q Consensus 222 ~~~~~~~~~~~~-i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 300 (378)
+++ |++++ ++++||+ | +.||++ +++++.+++||+||||++|++|+|+||||+++|++
T Consensus 307 ---------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 364 (468)
T 1vlu_A 307 ---------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTH 364 (468)
T ss_dssp ---------HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTS
T ss_pred ---------hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhC
Confidence 344 56554 3566775 4 789997 68899999999999999999999999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHHHcceeEEEEcCCCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 017066 301 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 301 ~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfg-----G~~~sG~g~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+|||++||||+|.++++++++++++|+|+||++....+.+||| |+|.||+|++ |.+|+++|++.|++.++.
T Consensus 365 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 365 SSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999999999999987777889999 9999999999 999999999999998863
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-68 Score=531.08 Aligned_cols=327 Identities=16% Similarity=0.223 Sum_probs=299.4
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHH----HHHHHcCCCCCcEEEEeC
Q 017066 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~----~~l~~aglP~g~v~~v~~ 100 (378)
.+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++
T Consensus 98 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g 177 (464)
T 3k9d_A 98 NEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTV 177 (464)
T ss_dssp TTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSS
T ss_pred CCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 4566788999999999999999999999999999999999999999999999999755 456889999999999999
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecC-CCCcEEEcCCcCHHHHHHHHHHHHhhcCCCcc
Q 017066 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDKAAELAHYALFFNQGQCC 179 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~g-G~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C 179 (378)
.+.+.++.|++||++|.|+||||+.+. +.+++ ++||+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|
T Consensus 178 ~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C 251 (464)
T 3k9d_A 178 PTIQGTDQLMKHKDTAVILATGGSAMV----KAAYS-SGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTIC 251 (464)
T ss_dssp CCHHHHHHHHHCTTEEEEEECSCHHHH----HHHTT-SSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCST
T ss_pred CCHHHHHHHHhCCCCCEEEEeCChHHH----HHHHh-cCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 878899999999999999999999853 44444 78998 7888 99999999999999999999999999999999
Q ss_pred cCCCeEEEeccchHHHHHHHHHHH-------hhcccCCCC-CCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017066 180 CAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 180 ~a~~~v~V~~~~~~~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
++++++|||++++|+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||..
T Consensus 252 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~- 330 (464)
T 3k9d_A 252 ASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET- 330 (464)
T ss_dssp TSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-
T ss_pred CCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-
Confidence 999999999999999999999975 567889887 78899999999999999999999999999999998863
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHH----HHHHcCCCCceEEEecCCHHHHHHHHHHcceeE
Q 017066 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 327 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 327 (378)
++++++++. +|+||||++|++|+|+|||| +++|++++||+++|||+|.++++++++++++|+
T Consensus 331 -------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~ 396 (464)
T 3k9d_A 331 -------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSR 396 (464)
T ss_dssp -------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEE
T ss_pred -------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeE
Confidence 356677764 89999999999999999997 799999999999999999999999999999999
Q ss_pred EEEcCCCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 017066 328 VWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 373 (378)
Q Consensus 328 v~vN~~~~---------~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~ 373 (378)
|+||++.. ..+.+|||| +.+|.|..+|..|+++|++.|+|.+..+
T Consensus 397 v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 397 LLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp EEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred EEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 99999764 468899998 7899999999999999999999988754
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.8e-69 Score=531.98 Aligned_cols=321 Identities=18% Similarity=0.170 Sum_probs=274.0
Q ss_pred HHHHHHHHHHHHhhhcCccCCCC---CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.++++..++..+.. .+...++.++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|+++
T Consensus 104 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~ 181 (463)
T 2h5g_A 104 LAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSN 181 (463)
T ss_dssp HHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHH
Confidence 46788999988877776653321 3445789999999999999887 87766 8999999999999999999999999
Q ss_pred HHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEE
Q 017066 79 LYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 154 (378)
Q Consensus 79 ~~l~~~l~~a----glP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV 154 (378)
.++++++.++ | |+|+++++++ +.++++.|++||++|.|.||||+.+|+.|++.++ +||+++|+|||||+||
T Consensus 182 ~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV 256 (463)
T 2h5g_A 182 RILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYV 256 (463)
T ss_dssp HHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEE
T ss_pred HHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEE
Confidence 9999999999 8 9999999999 6778999999999999999999999999998765 7899999999999999
Q ss_pred cCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHH
Q 017066 155 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 234 (378)
Q Consensus 155 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 234 (378)
++|||++.|++.+++++|.| ||.|++++|+|||++++| ||+ ++ +++
T Consensus 257 ~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~-----~~---~~i 302 (463)
T 2h5g_A 257 DSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL-----FD---QII 302 (463)
T ss_dssp CTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-----HH---HHH
T ss_pred cCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-----HH---HHH
Confidence 99999999999999999999 999999999999999998 232 23 357
Q ss_pred HHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHH
Q 017066 235 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 314 (378)
Q Consensus 235 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~ 314 (378)
++++++|++++.|+... ..++|+ +++|.+++||+||||++|++|+|+||||+++|+.++||++||||+|.+
T Consensus 303 ~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 373 (463)
T 2h5g_A 303 DMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDEN 373 (463)
T ss_dssp HHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred HHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHH
Confidence 77788999998555422 234443 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhceEEEEeC
Q 017066 315 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 315 ~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g--~~--~g~~~l~~~~~~k~~~~~~ 372 (378)
+++++++++++|.|+||++....+.+||||+|+||+| ++ +|.+||++|++.|+|.++.
T Consensus 374 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 374 TAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 9999999999999999998777788999999999999 65 8999999999999998874
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5.5e-68 Score=524.34 Aligned_cols=323 Identities=22% Similarity=0.240 Sum_probs=273.2
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.+++++.+++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++
T Consensus 102 ~~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 178 (444)
T 4ghk_A 102 MVEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESN 178 (444)
T ss_dssp HHHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHH
T ss_pred HHHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 345677777776543 333221 23556789999999999999998 8 58899999999999999999999999999
Q ss_pred HHHHHHH----HHcCCCCCcEEEEeCCch-hhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017066 79 LYVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~l----~~aglP~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
.++++++ .++|+|+|++++++|.+. ..+..|..||++|.|.||||+.+++.+++.+ ++|+++|+|||||+|
T Consensus 179 ~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~I 254 (444)
T 4ghk_A 179 TALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVY 254 (444)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEE
Confidence 9999997 789999999999998554 5788888999999999999999999998764 589999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhccc---CCCCCCCccccccCCHHHHHHH
Q 017066 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 230 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~ 230 (378)
|++|||++.|++.+++++|.|+| .|++++|+|||++++|+|+++|.++++++++ |+|. .
T Consensus 255 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~ 316 (444)
T 4ghk_A 255 VDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------A 316 (444)
T ss_dssp ECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------H
T ss_pred ECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------H
Confidence 99999999999999999999999 9999999999999999999999999999887 6542 2
Q ss_pred HHHHHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEec
Q 017066 231 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 310 (378)
Q Consensus 231 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s 310 (378)
.++++++. . | ++ +++++.+++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 317 ~~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 373 (444)
T 4ghk_A 317 RAVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVT 373 (444)
T ss_dssp HHHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEEC
T ss_pred HHHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEe
Confidence 45566542 1 1 11 356789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 017066 311 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 311 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g----~~~g~~~l~~~~~~k~~~~~~ 372 (378)
+|.++++++++++++|.|+||++..+.+..||||.|+||+| +++|.+|+++|++.|+|+++.
T Consensus 374 ~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 374 EDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp SBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999999998877888999999999998 678999999999999998764
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.3e-67 Score=519.20 Aligned_cols=321 Identities=21% Similarity=0.216 Sum_probs=281.9
Q ss_pred HHHHHHHHHHHHhhhcCccCCC---CCCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhH
Q 017066 2 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~ 78 (378)
+++.++|++.++++ .++..+. ..+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 46778888887765 3433221 22445688999999999999875 478999999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEE
Q 017066 79 LYVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 153 (378)
Q Consensus 79 ~~l~~~l~----~aglP~g~v~~v~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~i 153 (378)
.++++++. ++|+|+|++|++++. .++.++.|..||++|.|+||||+.+|+.|++.+ .+|+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 679999999999984 456788899999999999999999999998875 489999999999999
Q ss_pred EcCCcCHHHHHHHHHHHHhhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHH
Q 017066 154 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 233 (378)
Q Consensus 154 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 233 (378)
|++|||++.|++.+++++|.|+| .|++++|+|||++++|+|+++|.+++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999887642
Q ss_pred HHHhhhCCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCH
Q 017066 234 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 313 (378)
Q Consensus 234 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~ 313 (378)
+.||... .+ |+ ||| +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 1122211 12 33 886 345788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 017066 314 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 372 (378)
Q Consensus 314 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g----~~~g~~~l~~~~~~k~~~~~~ 372 (378)
++++++++++++|.|+||+.....+.+||||.|+||+| +++|.+|+++|++.|+|.++.
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999997777788999999999997 468999999999999998874
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=6e-65 Score=504.00 Aligned_cols=328 Identities=19% Similarity=0.262 Sum_probs=275.5
Q ss_pred CCcceeeeeeeceEEEEEcCCCcchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHH----HcCCCCCcEEEEeC
Q 017066 25 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSG 100 (378)
Q Consensus 25 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~----~aglP~g~v~~v~~ 100 (378)
.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|+++++++
T Consensus 93 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g 172 (452)
T 3my7_A 93 DNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQ 172 (452)
T ss_dssp ----CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSS
T ss_pred CCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcC
Confidence 34557889999999999999999999999999999999999999999999999998888765 78999999999999
Q ss_pred CchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCCCccc
Q 017066 101 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 180 (378)
Q Consensus 101 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~ 180 (378)
.+.+.++.|++||+++.|.||||+.+++ .++. ++||+++|+|||+|+||++|||++.|++.++.++|+++||.|+
T Consensus 173 ~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~ 247 (452)
T 3my7_A 173 PSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCA 247 (452)
T ss_dssp CCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTT
T ss_pred CCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccC
Confidence 8888999999999999999999998654 3443 6899999999999999999999999999999999999999999
Q ss_pred CCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc---CCCCee
Q 017066 181 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYY 257 (378)
Q Consensus 181 a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~~~g~~ 257 (378)
+++++|||++++|+|+++|+++ .||+++++++++++++++++...|++++ |+... ...|+|
T Consensus 248 a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v~-G~~~~~~~~~~G~~ 311 (452)
T 3my7_A 248 SEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKIV-GQPATAIAEMAGVK 311 (452)
T ss_dssp CEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGGT-TCCHHHHHHHHTCC
T ss_pred CCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeEe-cCccchhHHhCCce
Confidence 9999999999999999999874 4999999999999999998766777764 66532 135899
Q ss_pred eecee-------eccCCCcccccccccccceEEeeecCCHHHHHHHHHcCC----CCceEEEecCCHHHHHH---HHHHc
Q 017066 258 IKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVFTHNLDTANT---LMRAL 323 (378)
Q Consensus 258 ~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~s~d~~~~~~---~~~~l 323 (378)
++||+ +.++++++++.+ |+||||++|++|+|+|||++++|++. +||+++|||+|.+.+++ +++++
T Consensus 312 v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l 390 (452)
T 3my7_A 312 VPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKM 390 (452)
T ss_dssp CCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHC
T ss_pred eCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhC
Confidence 99997 778888999876 89999999999999999999999985 99999999999887777 99999
Q ss_pred ceeEEEEcCCCCCC-----------CCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCC
Q 017066 324 RVGSVWINCFDVFD-----------AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 375 (378)
Q Consensus 324 ~~g~v~vN~~~~~~-----------~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~~~~~~~ 375 (378)
++|+|+||++..+. +.+++ |++..|.+..++.-+.+.+.+.|+|..+.+|+
T Consensus 391 ~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 391 KTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp CCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECCC---
T ss_pred CEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 99999999975431 22233 56667777777778899999999999988764
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.53 E-value=0.023 Score=54.10 Aligned_cols=260 Identities=17% Similarity=0.179 Sum_probs=147.6
Q ss_pred CCCcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCe-EE-EeCCCCChhhHHHHHHHHHHcCCCCCcEEEE
Q 017066 24 DGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNT-IV-LKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 98 (378)
Q Consensus 24 ~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~-vv-lkps~~~~~~~~~l~~~l~~aglP~g~v~~v 98 (378)
..|...-.++.|+--|+++.|. .||. +.+...+||-.+|+. +| .-|++.. .....+.-..+.+|..+ +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EE
Confidence 4566677889999999999994 4664 456667899999996 33 3444322 22333444455666543 33
Q ss_pred eCCchhhHHHHhh----CCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec-CCCCc--EEEcCCcCHHHHHHHHHHHH
Q 017066 99 SGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYAL 171 (378)
Q Consensus 99 ~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~-gG~~~--~iV~~dadl~~aa~~i~~~~ 171 (378)
.-.|...-.+|.- -|.+|.|+=.|..=+..+ +.... + .|-..+ .|-+= +|-++++|.+..+..++.-+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQA 266 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQA 266 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHH
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhh
Confidence 3224333333432 478999998888766542 22221 1 132222 23333 33345689999888877665
Q ss_pred hhcCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCccc
Q 017066 172 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 251 (378)
Q Consensus 172 ~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 251 (378)
=+... .+.++|..+ ++|.+++.+.+.++--.. .. .+.+.+.++
T Consensus 267 EHd~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l-----------~r---~~i~~~sl~---------------- 309 (423)
T 4gic_A 267 EHDED-----AQAILISPD--AAHLEAVQASIERLLPGM-----------ER---AEVIRTSLE---------------- 309 (423)
T ss_dssp TTCTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGC-----------TT---HHHHHHHHH----------------
T ss_pred ccCCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhC-----------cc---HHHHHHHHh----------------
Confidence 44332 334666554 455555555443321000 00 011111111
Q ss_pred CCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcc-eeEEEE
Q 017066 252 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWI 330 (378)
Q Consensus 252 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~v 330 (378)
-+| .++.++|++|+++++|..-.- ..-|.++|+. .+..+++ +|.|++
T Consensus 310 -------------------------~~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFl 357 (423)
T 4gic_A 310 -------------------------RRG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFM 357 (423)
T ss_dssp -------------------------HHC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEE
T ss_pred -------------------------cCc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeec
Confidence 122 355679999999999985433 4668888865 6778885 999999
Q ss_pred cCCCCC---------CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 017066 331 NCFDVF---------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 368 (378)
Q Consensus 331 N~~~~~---------~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~ 368 (378)
..+... ++.+|= +|..++.+..+...|++.-++
T Consensus 358 G~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 358 GRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp C----------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred CCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 875431 233444 455666666778888876554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.40 E-value=0.055 Score=51.59 Aligned_cols=258 Identities=19% Similarity=0.181 Sum_probs=145.8
Q ss_pred CcceeeeeeeceEEEEEcCC---CcchHHHHHhhhchhccCCeEEE--eCCCCChhhHHHHHHHHHHcCCCCCcEEEEeC
Q 017066 26 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 100 (378)
Q Consensus 26 ~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~AL~~Gn~vvl--kps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 100 (378)
|...-.++.|+--|+++.|. -|| .+.++..+||-.+|+.=|+ -|+ .....+.-..+.+|..+ +..-
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp----~i~p~iL~AA~l~Gv~e----Iy~v 184 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPP----PIADEILYAAQLCGVQD----VFNV 184 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECS----SCCHHHHHHHHHTTCCE----EEEC
T ss_pred CcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCC----CCCHHHHHHHHHcCCCE----Eeec
Confidence 55567789999999999996 566 4556667899999995444 444 12223334445666543 2222
Q ss_pred CchhhHHHHh----hCCCcCEEEEECCHHHHHHHHHHHhcCCCCcceeec-CCCCc--EEEcCCcCHHHHHHHHHHHHhh
Q 017066 101 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYALFF 173 (378)
Q Consensus 101 ~~~~~~~~l~----~~~~v~~v~ftGs~~~~~~v~~~~~~~~~~~v~~e~-gG~~~--~iV~~dadl~~aa~~i~~~~~~ 173 (378)
.|...-.+|. +-|++|.|+=.|..=+..+ |.........|-..+ .|-+= +|-++++|.+..+..++.-+=+
T Consensus 185 GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 185 GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 2333333333 2477888887777655432 211100011222222 23333 3334568888887777655533
Q ss_pred cCCCcccCCCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCccccccCCHHHHHHHHHHHHHhhhCCCeEeeCCcccCC
Q 017066 174 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 253 (378)
Q Consensus 174 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 253 (378)
... .+.++|-.+ ++|.+++.+.+.++--..| . .+ .++.
T Consensus 263 d~~-----a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r---~~----ia~~----------------- 300 (434)
T 1kae_A 263 GPD-----SQVILLTPA--ADMARRVAEAVERQLAELP-----------R---AE----TARQ----------------- 300 (434)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------T---HH----HHHH-----------------
T ss_pred CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------h---HH----HHHH-----------------
Confidence 332 334566544 4444444443332110000 0 00 0111
Q ss_pred CCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHc-ceeEEEEcC
Q 017066 254 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 332 (378)
Q Consensus 254 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~vN~ 332 (378)
-+..- .++.++|++|+++++|..-.- ..-|.++|+. .+..++ ++|.|++..
T Consensus 301 -----------------------sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 301 -----------------------ALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGD 352 (434)
T ss_dssp -----------------------HHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEEST
T ss_pred -----------------------HHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCC
Confidence 11222 566789999999999985443 4678898864 677888 599999997
Q ss_pred CCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 017066 333 FDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 369 (378)
Q Consensus 333 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~l~~~~~~k~~~ 369 (378)
+.. .+..+|=+ |..++.+..+...|++.-++.
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred CCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 643 23556654 445666667788888765553
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=69.35 E-value=8.8 Score=28.59 Aligned_cols=22 Identities=14% Similarity=0.434 Sum_probs=18.9
Q ss_pred eEEeeecCCHHHHHHHHHcCCC
Q 017066 281 VQSILKYKDLDEVIQRSNASQY 302 (378)
Q Consensus 281 vl~v~~~~~~~eai~~~n~~~~ 302 (378)
-+.|++|+|.++|.++.|+.+|
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHH
T ss_pred eEEEEECCCHHHHHHHHcCHHH
Confidence 6789999999999999986544
No 56
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=56.91 E-value=29 Score=26.86 Aligned_cols=29 Identities=21% Similarity=0.344 Sum_probs=22.7
Q ss_pred ccccccceEEeeecCCHHHHHHHHHcCCCC
Q 017066 274 KDEIFGPVQSILKYKDLDEVIQRSNASQYG 303 (378)
Q Consensus 274 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 303 (378)
.+|..|- +.|+.++|.|||++++.+.+..
T Consensus 80 tkE~lgG-~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 80 TKEQLGG-FYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp CSSEEEE-EEEEEESSHHHHHHHHTTCGGG
T ss_pred Cccccee-EEEEEeCCHHHHHHHHHhCCcc
Confidence 3466664 5778999999999999987764
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=48.74 E-value=26 Score=25.60 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=19.8
Q ss_pred ceEEeeecCCHHHHHHHHHcCCC
Q 017066 280 PVQSILKYKDLDEVIQRSNASQY 302 (378)
Q Consensus 280 Pvl~v~~~~~~~eai~~~n~~~~ 302 (378)
..+.|++|+|.+.|.++.|+.+|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 56899999999999999987654
No 58
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=43.33 E-value=15 Score=30.03 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC--CCcCEEEEECCHHHHH
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 128 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~--~~v~~v~ftGs~~~~~ 128 (378)
..+..+.+.+++.|...-...+++.+ +.+.+.+.+. .+.|.|+.||+...+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 35567888999999877777888876 7776666543 3689999999887544
No 59
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=41.85 E-value=34 Score=27.24 Aligned_cols=65 Identities=14% Similarity=0.135 Sum_probs=39.6
Q ss_pred cCCHHHHHHHHHHHHHhhh-CCCeEeeCCcccCCCCeeeeceeeccCCCcccccccccccceEEeeecCCHHHHHHHHHc
Q 017066 221 QIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 299 (378)
Q Consensus 221 l~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 299 (378)
+.+.+.+++..+....++. -|++++..|.. +.++..... |. ...+.|++|.|.+.++++.++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 4555666655555555444 47777765542 123433211 11 146789999999999999887
Q ss_pred CCC
Q 017066 300 SQY 302 (378)
Q Consensus 300 ~~~ 302 (378)
..|
T Consensus 108 peY 110 (143)
T 3hhl_A 108 PVY 110 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 60
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=41.00 E-value=22 Score=30.78 Aligned_cols=68 Identities=13% Similarity=0.143 Sum_probs=48.0
Q ss_pred HHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHH
Q 017066 53 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 128 (378)
Q Consensus 53 ~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 128 (378)
+..++..+.+||-||+|.+. +.....+..+|..- +|.+.++++..+. + +...-..+.+.++.+.....
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~-~----Y~~~~~cnilgls~~v~iP~ 88 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSS-Q----YEEAYRCNFLGLSPHVQIPP 88 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEES-S----CCCTTTCSEEEECTTCCCCH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccch-h----hcchhheeeecCCCCcccCc
Confidence 45667788899999999876 55666677778887 9999999986521 1 22234577787777655443
No 61
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=39.31 E-value=46 Score=26.86 Aligned_cols=114 Identities=18% Similarity=0.128 Sum_probs=70.8
Q ss_pred eEEEEEcCCC-cchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHH-cCCCCCcEEEEeC-CchhhHHHHhhCC
Q 017066 37 GVAGQIIPWN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 113 (378)
Q Consensus 37 Gvv~~i~p~n-~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~-aglP~g~v~~v~~-~~~~~~~~l~~~~ 113 (378)
|-|+++..-+ =+-...+..-...+..|..++--. -|+ +.|++ .|++...++-++. ..+.+.+.+ ..-
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGALI-SEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHHH-HTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHHH-HCC
Confidence 6555555433 344444445556666788877653 343 44555 7999766654432 123455544 556
Q ss_pred CcCEEEEECC-------HHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCC
Q 017066 114 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176 (378)
Q Consensus 114 ~v~~v~ftGs-------~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~G 176 (378)
+++.|+||-+ ...+..|.+.+.. ...|+.-.+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999976 5677888888887 445665532 355667777777664
No 62
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=37.02 E-value=17 Score=30.40 Aligned_cols=53 Identities=26% Similarity=0.189 Sum_probs=38.4
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC--CCcCEEEEECCHHHHH
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 128 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~--~~v~~v~ftGs~~~~~ 128 (378)
.....+.+.+++.|...-...+++.+.+.+.+.+.+. .+.|.|+.||++..+.
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4566788899999877666677776555566665542 4689999999987644
No 63
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=36.32 E-value=51 Score=26.90 Aligned_cols=52 Identities=27% Similarity=0.123 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHh---hCCCcCEEEEECCHHHH
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 127 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~---~~~~v~~v~ftGs~~~~ 127 (378)
..+.+|.+.|.+.|+.--...+++.+.+.+.+++. ...+.|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 35678999999999876666667654445555543 34568999999988643
No 64
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=35.33 E-value=65 Score=22.63 Aligned_cols=38 Identities=32% Similarity=0.476 Sum_probs=30.4
Q ss_pred hccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCC
Q 017066 60 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 101 (378)
Q Consensus 60 L~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~ 101 (378)
=..+|-+|+|..| -.+..++.++.+..+|. ++-.+.|+
T Consensus 18 ~~~~n~vVikT~P---G~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 18 DDSGNLAVLRTPP---GAAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp EEETTEEEEECST---TCHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred eecCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecC
Confidence 3479999999874 55788999999987766 88888774
No 65
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=34.22 E-value=30 Score=28.29 Aligned_cols=52 Identities=25% Similarity=0.230 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC---CCcCEEEEECCHHHH
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 127 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~ 127 (378)
..+..+.+.|++.|.......+++.+.+.+.+.+.+. .+.|.|+.||+...+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3456788889999986655666765545555555432 368999999998654
No 66
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=34.09 E-value=62 Score=22.21 Aligned_cols=57 Identities=21% Similarity=0.235 Sum_probs=40.3
Q ss_pred ccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHH
Q 017066 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 134 (378)
Q Consensus 61 ~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~ 134 (378)
..+|-+|+|..| -.+..++.++.+.++|+ ++-.+.|++ -.++..-+...+..+.+..
T Consensus 11 ~~~n~vVikT~p---G~A~~va~~iD~~~~~e-I~GTIAGDD-------------TIlvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 11 GTGNLLVLRTLP---GNAHAIGVLLDNLDWDE-IVGTICGDD-------------TCLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp EETTEEEEEEST---TCHHHHHHHHHHHCCTT-EEEEEECSS-------------EEEEEESSHHHHHHHHHHH
T ss_pred ecCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEeeCC-------------EEEEEECCHHHHHHHHHHH
Confidence 379999999874 55788999999987776 888888742 1244555666666665544
No 67
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=33.17 E-value=38 Score=28.10 Aligned_cols=123 Identities=15% Similarity=0.058 Sum_probs=76.1
Q ss_pred ceeeeeeec-eEEEEEcCCC-cchHHHHHhhhchhccCCeEEEeCCCCChhhHHHHHHHHHH-cCCCCCcEEEEeC-Cch
Q 017066 28 HVQTLHEPI-GVAGQIIPWN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGP 103 (378)
Q Consensus 28 ~~~~~~~P~-Gvv~~i~p~n-~P~~~~~~~~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~-aglP~g~v~~v~~-~~~ 103 (378)
....+..|. |-|+++..-+ =+-...+..-...+..|..++-- .-| ++.|++ .|++...++-++. ..+
T Consensus 18 ~~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT-----~gT----a~~L~e~~Gl~v~~v~k~~eGG~p 88 (178)
T 1vmd_A 18 RRYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYAT-----GTT----GALLQEKLGLKVHRLKSGPLGGDQ 88 (178)
T ss_dssp CEEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEEC-----HHH----HHHHHHHHCCCCEECSCGGGTHHH
T ss_pred cceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEc-----hHH----HHHHHHHhCceeEEEeecCCCCCc
Confidence 345556665 7666665543 34444455555666678877643 333 455555 7999766653332 123
Q ss_pred hhHHHHhhCCCcCEEEEECC-------HHHHHHHHHHHhcCCCCcceeecCCCCcEEEcCCcCHHHHHHHHHHHHhhcCC
Q 017066 104 TAGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 176 (378)
Q Consensus 104 ~~~~~l~~~~~v~~v~ftGs-------~~~~~~v~~~~~~~~~~~v~~e~gG~~~~iV~~dadl~~aa~~i~~~~~~~~G 176 (378)
.+.+.+ ..-.|+.|+||-+ ...+..|.+.+.. ...|+.-.+ ..++.++.+.+++..
T Consensus 89 qI~d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 89 QIGAMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred hHHHHH-HCCCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 455544 5568999999976 3456788888877 445665532 356677888877765
No 68
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=31.48 E-value=56 Score=22.96 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=31.3
Q ss_pred ccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCC
Q 017066 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 101 (378)
Q Consensus 61 ~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~ 101 (378)
..+|-+|+|..| -.+..++.++.+...+++++-.+.|+
T Consensus 13 ~~~n~vVikT~P---G~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 13 YNDAVVVIHTSP---GAAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp ECSSCEEEEEST---TTHHHHHHHHTTTTTTTTEEEEEECS
T ss_pred ecCCEEEEEeCC---CcHHHHHHHHHhcCCCCCeEEEEecC
Confidence 379999999774 55788999999877788899999874
No 69
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=30.69 E-value=57 Score=28.80 Aligned_cols=88 Identities=16% Similarity=0.094 Sum_probs=53.1
Q ss_pred EEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC-CCCc-ce
Q 017066 66 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKP-VT 143 (378)
Q Consensus 66 vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~-~~~~-v~ 143 (378)
+|.+|.+........+.+.|++.|..- .....|.|+.-|+..+-..+++..... ...| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 445544333333445555666665421 024679999999999999988887642 1356 44
Q ss_pred eecCCCCcEEEcCCcCHHHHHHHHHHHH
Q 017066 144 LELGGKSPFIVCEDADVDKAAELAHYAL 171 (378)
Q Consensus 144 ~e~gG~~~~iV~~dadl~~aa~~i~~~~ 171 (378)
..+|-.+.+-=....|++.+++.+..+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 5555444221123467888888887654
No 70
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=30.14 E-value=42 Score=26.59 Aligned_cols=63 Identities=11% Similarity=0.103 Sum_probs=42.7
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhhHHHHhhCCCcCEEEEECCH-----HHHHHHHHHHhcCCCCcceeec
Q 017066 82 SKLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLEL 146 (378)
Q Consensus 82 ~~~l~~aglP~g~v~~v~~~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~~~~v~~~~~~~~~~~v~~e~ 146 (378)
++.|++.|+|...++-++.. . +.+.+.+ .+-+++.|++|-+. ..+..|.+.+.. +..|++-++
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcCH
Confidence 45667899998777766542 2 4555555 45689999997654 367788888877 456766543
No 71
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=29.15 E-value=64 Score=22.89 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=39.5
Q ss_pred ccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHH
Q 017066 61 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 134 (378)
Q Consensus 61 ~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~ 134 (378)
..+|-+|+|..| -.+..++.++.+.++|. ++-.+.|++ . .++..-+...+..+.+..
T Consensus 23 ~~~n~vVikT~P---G~A~~vA~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 23 SASHMIVLKTMP---GNAQAIGALMDNLDWDE-MMGTICGDD-T------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp EETTEEEEEEST---TCHHHHHHHHHTTTCTT-CCEEEECSS-E------------EEEECSSHHHHHHHHHHH
T ss_pred ecCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEECCHHHHHHHHHHH
Confidence 479999999874 55788999999987776 888887742 1 234445555556555543
No 72
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.76 E-value=1.2e+02 Score=27.47 Aligned_cols=104 Identities=19% Similarity=0.156 Sum_probs=58.6
Q ss_pred eEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCC-chhh---HHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC---
Q 017066 65 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY-GPTA---GAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--- 137 (378)
Q Consensus 65 ~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~-~~~~---~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~--- 137 (378)
.+|++|....-.....+.+.|++.|.. +.+.... ..+. ...+.. ...|.|+..|+..+...+.......
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 355566543333344567778877764 3333321 1111 112222 3579999999999999999887631
Q ss_pred CCCcc-eeecCCCC-cEE-EcCCcCHHHHHHHHHHHHh
Q 017066 138 NLKPV-TLELGGKS-PFI-VCEDADVDKAAELAHYALF 172 (378)
Q Consensus 138 ~~~~v-~~e~gG~~-~~i-V~~dadl~~aa~~i~~~~~ 172 (378)
...|+ ++-+|--| .+- +.-..|++.+++.++.+..
T Consensus 109 ~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 109 DIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 22344 34455444 221 2213578889888876554
No 73
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=27.46 E-value=30 Score=28.60 Aligned_cols=53 Identities=25% Similarity=0.115 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC---CCcCEEEEECCHHHHH
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTGK 128 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~---~~v~~v~ftGs~~~~~ 128 (378)
..+..+.+.+++.|...-...+++.+.+.+.+.+.+. .+.|.|+.||+...+.
T Consensus 40 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred hHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 4556788899999886655667766555565555432 2489999999987544
No 74
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=26.74 E-value=55 Score=27.20 Aligned_cols=43 Identities=23% Similarity=0.328 Sum_probs=34.8
Q ss_pred hhchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCC
Q 017066 56 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 101 (378)
Q Consensus 56 ~~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~ 101 (378)
+...-..+|-+|+|..| -.+..++.++...++|++++-.+.|+
T Consensus 110 vvsv~~~~nlvVIkT~P---G~A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 110 VLDVDHNQALVVIHTGP---GAAQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp EEEEEECSSCEEEEEST---TCHHHHHHHHHHHCGGGTEEEEEECS
T ss_pred EEEEeecCCEEEEEeCC---CcHHHHHHHHHhCCCCCCeEEEEecC
Confidence 34455689999999875 55788999999988999899999874
No 75
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=25.93 E-value=18 Score=34.19 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC-CCcCEEEEECCHHHHH
Q 017066 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTTGK 128 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~-~~v~~v~ftGs~~~~~ 128 (378)
....|.+.+++.|...-.+.+++.+...+.+.+.+. .+.|.|+.||+...+.
T Consensus 212 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 212 NSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 446788899999876555666765444444444321 2479999999998765
No 76
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=25.13 E-value=88 Score=23.88 Aligned_cols=80 Identities=5% Similarity=-0.007 Sum_probs=47.9
Q ss_pred HHHHHHhhcCCCcccC--CCeEEEeccchHHHHHHHHHHHhhcccCCCCCCCcccc-------ccCCHHHHHHHHHHHHH
Q 017066 166 LAHYALFFNQGQCCCA--GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG-------PQIDSEQFEKILKYIRS 236 (378)
Q Consensus 166 ~i~~~~~~~~Gq~C~a--~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~g-------pl~~~~~~~~~~~~i~~ 236 (378)
..+........-.|.. ....+++.+.++++.+.+.+.+..+.--.|..++..-. |-.+..- +..+|+.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 3444444444444444 23447899999999999999999876666666554322 2223333 3456666
Q ss_pred hhhCCCeEeeCC
Q 017066 237 GVDGGAKLETGG 248 (378)
Q Consensus 237 a~~~ga~~~~gg 248 (378)
.+++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 667776555444
No 77
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.92 E-value=1.3e+02 Score=27.21 Aligned_cols=104 Identities=16% Similarity=0.071 Sum_probs=58.0
Q ss_pred eEEEeCCCCC---hhhHHHHHHHHHHcCCCCCcEEEEeCCch-hh---HHHHhhCCCcCEEEEECCHHHHHHHHHHHhcC
Q 017066 65 TIVLKTAEQT---PLSALYVSKLLHEAGLPPGVLNIVSGYGP-TA---GAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 137 (378)
Q Consensus 65 ~vvlkps~~~---~~~~~~l~~~l~~aglP~g~v~~v~~~~~-~~---~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~~ 137 (378)
.+|+.|.... ......+.+.|+++|+. +.+...... +. ...+. ....|.|+..|+..+...+.....+.
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~-~~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAM-HENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHT-TTTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHh-hcCCCEEEEEcCchHHHHHHHHHHhC
Confidence 3556665532 23345677778887653 333332221 21 12222 24679999999999999998887321
Q ss_pred -CCCcc-eeecCCCCcEE-Ec-CCcCHHHHHHHHHHHHh
Q 017066 138 -NLKPV-TLELGGKSPFI-VC-EDADVDKAAELAHYALF 172 (378)
Q Consensus 138 -~~~~v-~~e~gG~~~~i-V~-~dadl~~aa~~i~~~~~ 172 (378)
...|+ ++-+|--|-+- .+ -..|++.+++.++.+..
T Consensus 104 ~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~ 142 (337)
T 2qv7_A 104 PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHS 142 (337)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCE
T ss_pred CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCc
Confidence 22333 34444333222 11 23578889888876543
No 78
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.84 E-value=60 Score=25.27 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=31.2
Q ss_pred CcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHHhc
Q 017066 93 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 136 (378)
Q Consensus 93 g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~~~ 136 (378)
+.+++++|+..+......+.+++.+|++||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 57888888766554444433579999999998777777666654
No 79
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=23.41 E-value=53 Score=26.83 Aligned_cols=51 Identities=24% Similarity=0.173 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhh---CCCcCEEEEECCHHHH
Q 017066 77 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 127 (378)
Q Consensus 77 ~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~---~~~v~~v~ftGs~~~~ 127 (378)
.+..+.+.|++.|...-...+++.+.+.+.+.+.+ ..+.|.|+.||+...+
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 44678888999987655566676554555555543 2248999999988654
No 80
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=22.20 E-value=57 Score=26.84 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhC-CCcCEEEEECCHHH
Q 017066 76 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTT 126 (378)
Q Consensus 76 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~-~~v~~v~ftGs~~~ 126 (378)
..+..|.+.|.+.|+......+++.+...+.+.+.+. .+.|.|+.||+...
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~ 74 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGP 74 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcC
Confidence 4556788899999987666677766545555544331 23677777777653
No 81
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.60 E-value=41 Score=27.78 Aligned_cols=45 Identities=13% Similarity=0.168 Sum_probs=30.8
Q ss_pred cccccceEEeeecCCHHHHHHHH----HcCCCCceEEEecCCHHHHHHH
Q 017066 275 DEIFGPVQSILKYKDLDEVIQRS----NASQYGLAAGVFTHNLDTANTL 319 (378)
Q Consensus 275 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~~~v~s~d~~~~~~~ 319 (378)
+|.+|+..+..--.+.++|++.+ .+...-|-.+++++.....+.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f 73 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVF 73 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHH
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHH
Confidence 45566655555456889999998 7777778889988765444433
No 82
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=21.46 E-value=31 Score=27.21 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=39.5
Q ss_pred HHHHHHH-cCCCCCcEEEEe-CCchhhHHHHhhCCCcCEEEEECC-------HHHHHHHHHHHhcCCCCccee
Q 017066 81 VSKLLHE-AGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTL 144 (378)
Q Consensus 81 l~~~l~~-aglP~g~v~~v~-~~~~~~~~~l~~~~~v~~v~ftGs-------~~~~~~v~~~~~~~~~~~v~~ 144 (378)
.++.|++ .|++...++-++ +..+.+.+.+ ..-+++.|+||-+ ...+..|.+.+.. ...|+.-
T Consensus 40 Ta~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T 110 (134)
T 2xw6_A 40 TGRRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEPDVQALLRVCDV-HGVPLAT 110 (134)
T ss_dssp HHHHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHH-HTCCEEC
T ss_pred HHHHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccchHHHHHHHHHH-cCCCeEc
Confidence 3455555 799987766555 4234555554 4568999999977 3345677777766 3345544
No 83
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.98 E-value=2.1e+02 Score=20.81 Aligned_cols=44 Identities=9% Similarity=0.175 Sum_probs=32.9
Q ss_pred eEEeeecCC---HHHHHHHHHcCCCCceEEEecCCHHHHHHHHHHcc
Q 017066 281 VQSILKYKD---LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 324 (378)
Q Consensus 281 vl~v~~~~~---~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~ 324 (378)
.+.++.++| .+.||++..+.....-.-+|..|..+.+++.++++
T Consensus 52 tivvvvvddkewaekairfvkslgaqvliiiydqdqnrleefsrevr 98 (134)
T 2l69_A 52 TIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVR 98 (134)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHH
Confidence 344555566 35788888888877777788889888888888774
No 84
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=20.09 E-value=1.2e+02 Score=24.11 Aligned_cols=61 Identities=21% Similarity=0.177 Sum_probs=42.0
Q ss_pred hchhccCCeEEEeCCCCChhhHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhhCCCcCEEEEECCHHHHHHHHHHH
Q 017066 57 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 134 (378)
Q Consensus 57 ~~AL~~Gn~vvlkps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~ 134 (378)
...=..+|-+|+|..| -.+..++.++...++|. ++-.+.|++ . .++..-+...+..+.+..
T Consensus 85 ~sv~~~~n~vVikT~P---G~A~~va~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 85 IKLDGTGNLLVLRTLP---GNAHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp EEEEEETTEEEEEEST---TCHHHHHHHHHHHTCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred EEEeecCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEeCCHHHHHHHHHHH
Confidence 3444489999999874 55788999999997776 888888742 1 244455566666665543
Done!