Query 017067
Match_columns 378
No_of_seqs 185 out of 1971
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 05:19:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017067.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017067hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02779 haloacid dehalogenase 100.0 8.7E-28 1.9E-32 231.7 22.3 226 82-369 38-271 (286)
2 PLN02770 haloacid dehalogenase 100.0 6.9E-28 1.5E-32 227.6 18.4 223 79-377 17-244 (248)
3 COG0637 Predicted phosphatase/ 100.0 1.1E-27 2.4E-32 222.7 19.0 210 83-368 1-214 (221)
4 TIGR03351 PhnX-like phosphonat 100.0 1.8E-27 3.9E-32 219.7 18.9 211 84-368 1-217 (220)
5 TIGR01422 phosphonatase phosph 100.0 2.5E-27 5.5E-32 223.8 18.8 212 84-368 2-250 (253)
6 PLN03243 haloacid dehalogenase 100.0 3.6E-27 7.7E-32 224.4 19.2 214 79-369 19-233 (260)
7 PRK13226 phosphoglycolate phos 100.0 3.3E-27 7.1E-32 220.3 18.3 210 83-369 11-223 (229)
8 TIGR01449 PGP_bact 2-phosphogl 100.0 5.3E-27 1.1E-31 215.0 18.4 208 87-367 1-210 (213)
9 PRK10826 2-deoxyglucose-6-phos 99.9 6.5E-27 1.4E-31 216.7 18.9 211 81-367 4-216 (222)
10 PRK13288 pyrophosphatase PpaX; 99.9 4.4E-27 9.6E-32 216.5 17.0 210 82-372 1-212 (214)
11 PRK13478 phosphonoacetaldehyde 99.9 7.4E-27 1.6E-31 222.7 19.0 222 82-376 2-260 (267)
12 PRK11587 putative phosphatase; 99.9 2.7E-26 5.8E-31 212.3 19.7 204 82-367 1-204 (218)
13 PLN02575 haloacid dehalogenase 99.9 2.3E-26 5E-31 227.8 18.6 210 83-368 130-339 (381)
14 COG0546 Gph Predicted phosphat 99.9 4.1E-26 8.9E-31 211.8 18.8 214 82-370 2-217 (220)
15 PLN02940 riboflavin kinase 99.9 1.2E-25 2.6E-30 225.0 20.7 208 82-367 9-217 (382)
16 PRK10563 6-phosphogluconate ph 99.9 5.4E-26 1.2E-30 210.1 16.4 213 83-378 3-217 (221)
17 PRK13222 phosphoglycolate phos 99.9 3.7E-25 8E-30 204.4 21.3 216 82-370 4-221 (226)
18 PRK13225 phosphoglycolate phos 99.9 1.1E-25 2.4E-30 215.5 17.9 212 80-374 58-271 (273)
19 TIGR02253 CTE7 HAD superfamily 99.9 8.5E-25 1.9E-29 201.6 19.4 208 84-366 2-220 (221)
20 TIGR01454 AHBA_synth_RP 3-amin 99.9 3.9E-25 8.5E-30 202.2 16.5 198 87-368 1-201 (205)
21 PRK13223 phosphoglycolate phos 99.9 8.1E-25 1.8E-29 209.5 19.0 215 82-368 11-227 (272)
22 TIGR01990 bPGM beta-phosphoglu 99.9 7.1E-25 1.5E-29 196.4 17.3 184 86-344 1-185 (185)
23 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 1.5E-24 3.2E-29 194.3 17.7 185 84-343 1-185 (185)
24 PRK09449 dUMP phosphatase; Pro 99.9 3.8E-24 8.1E-29 198.1 19.7 210 82-368 1-220 (224)
25 PRK10725 fructose-1-P/6-phosph 99.9 2.3E-24 5E-29 193.9 17.4 183 83-344 4-186 (188)
26 TIGR02254 YjjG/YfnB HAD superf 99.9 3.1E-24 6.8E-29 197.7 17.7 206 84-368 1-222 (224)
27 PRK06698 bifunctional 5'-methy 99.9 3.9E-24 8.5E-29 219.0 19.7 216 81-373 238-456 (459)
28 PLN02919 haloacid dehalogenase 99.9 1.8E-23 3.9E-28 232.0 23.5 219 80-376 71-293 (1057)
29 PRK14988 GMP/IMP nucleotidase; 99.9 1.2E-23 2.5E-28 196.0 15.3 132 181-374 90-222 (224)
30 TIGR02252 DREG-2 REG-2-like, H 99.9 3.1E-23 6.7E-28 189.1 17.3 183 85-342 1-203 (203)
31 PLN02811 hydrolase 99.9 3.4E-23 7.3E-28 191.9 16.4 202 91-367 1-207 (220)
32 TIGR01428 HAD_type_II 2-haloal 99.9 2.1E-23 4.6E-28 189.6 13.9 105 183-347 91-195 (198)
33 PRK10748 flavin mononucleotide 99.9 2.1E-22 4.5E-27 189.1 17.6 211 81-368 7-236 (238)
34 KOG2914 Predicted haloacid-hal 99.9 9.7E-22 2.1E-26 181.7 19.1 209 82-367 8-219 (222)
35 PF13419 HAD_2: Haloacid dehal 99.9 1.9E-22 4.1E-27 176.8 13.4 175 87-343 1-176 (176)
36 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 7.9E-21 1.7E-25 172.9 15.8 183 85-336 1-197 (197)
37 TIGR01993 Pyr-5-nucltdase pyri 99.9 3.2E-21 6.9E-26 173.4 12.5 177 86-343 2-184 (184)
38 TIGR02247 HAD-1A3-hyp Epoxide 99.9 2.7E-21 5.9E-26 177.4 12.3 109 181-347 91-199 (211)
39 PRK09456 ?-D-glucose-1-phospha 99.9 4.5E-21 9.8E-26 174.9 13.2 107 184-350 84-191 (199)
40 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 1E-20 2.2E-25 168.5 14.2 100 183-343 84-183 (183)
41 COG1011 Predicted hydrolase (H 99.8 9.6E-21 2.1E-25 175.0 13.6 129 182-371 97-227 (229)
42 PHA02597 30.2 hypothetical pro 99.8 6.8E-20 1.5E-24 166.5 13.7 189 84-367 2-195 (197)
43 TIGR00338 serB phosphoserine p 99.8 5E-20 1.1E-24 169.9 12.7 200 81-364 11-211 (219)
44 KOG3085 Predicted hydrolase (H 99.8 1.5E-19 3.2E-24 168.0 14.4 203 80-355 3-224 (237)
45 PLN02954 phosphoserine phospha 99.8 2.4E-19 5.1E-24 166.0 15.6 209 82-368 10-221 (224)
46 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 6.4E-19 1.4E-23 153.6 12.9 154 86-337 1-154 (154)
47 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 7.8E-20 1.7E-24 162.7 7.1 167 86-336 1-175 (175)
48 PRK11133 serB phosphoserine ph 99.8 1.3E-18 2.9E-23 170.1 13.5 199 81-362 107-305 (322)
49 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 5.9E-18 1.3E-22 153.3 15.9 114 183-347 79-193 (201)
50 TIGR01691 enolase-ppase 2,3-di 99.8 2.9E-17 6.3E-22 152.6 18.1 209 84-365 1-219 (220)
51 PRK09552 mtnX 2-hydroxy-3-keto 99.7 3.8E-17 8.2E-22 151.4 10.6 143 182-374 72-216 (219)
52 TIGR01656 Histidinol-ppas hist 99.7 3.6E-17 7.8E-22 142.5 8.8 107 184-346 27-147 (147)
53 PRK13582 thrH phosphoserine ph 99.7 6.3E-16 1.4E-20 141.0 12.3 132 183-374 67-199 (205)
54 PRK06769 hypothetical protein; 99.7 1.9E-16 4.1E-21 141.8 8.7 128 184-367 28-168 (173)
55 TIGR00213 GmhB_yaeD D,D-heptos 99.7 4.9E-16 1.1E-20 139.3 10.5 136 183-367 25-175 (176)
56 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 6.2E-16 1.3E-20 131.7 10.3 99 185-344 26-131 (132)
57 TIGR01685 MDP-1 magnesium-depe 99.6 1.4E-16 3E-21 142.7 5.4 107 182-347 43-160 (174)
58 PRK08942 D,D-heptose 1,7-bisph 99.6 1.4E-15 3E-20 136.9 10.4 134 184-371 29-177 (181)
59 TIGR01672 AphA HAD superfamily 99.6 6.7E-15 1.4E-19 138.1 15.4 109 183-355 113-223 (237)
60 KOG3109 Haloacid dehalogenase- 99.6 2.3E-15 4.9E-20 136.3 11.0 132 182-373 98-230 (244)
61 COG0560 SerB Phosphoserine pho 99.6 1.9E-14 4.2E-19 133.0 15.6 187 82-346 3-189 (212)
62 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 5.5E-15 1.2E-19 131.6 10.2 99 185-342 43-160 (166)
63 TIGR03333 salvage_mtnX 2-hydro 99.6 6.7E-15 1.4E-19 135.9 10.6 140 182-371 68-209 (214)
64 TIGR01452 PGP_euk phosphoglyco 99.6 7.8E-15 1.7E-19 141.0 11.1 61 306-366 208-279 (279)
65 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 3.2E-14 6.9E-19 129.4 14.6 114 184-346 87-200 (202)
66 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.6 3.7E-14 8E-19 134.2 14.7 61 306-366 184-249 (249)
67 TIGR01489 DKMTPPase-SF 2,3-dik 99.5 8.9E-14 1.9E-18 124.4 14.1 111 183-339 71-184 (188)
68 PLN02645 phosphoglycolate phos 99.5 8.9E-14 1.9E-18 135.8 14.0 63 306-368 236-305 (311)
69 TIGR01488 HAD-SF-IB Haloacid D 99.5 1.1E-13 2.4E-18 122.9 12.8 107 182-336 71-177 (177)
70 TIGR01261 hisB_Nterm histidino 99.5 2.5E-14 5.3E-19 126.8 8.5 108 183-348 28-151 (161)
71 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.5 1.5E-14 3.3E-19 137.5 7.4 127 185-368 121-252 (257)
72 cd01427 HAD_like Haloacid deha 99.5 1.4E-13 3E-18 114.9 11.9 116 183-343 23-139 (139)
73 PRK10444 UMP phosphatase; Prov 99.5 5.2E-13 1.1E-17 126.4 17.1 77 283-367 165-246 (248)
74 TIGR02137 HSK-PSP phosphoserin 99.5 1.8E-13 3.9E-18 125.8 13.2 191 85-370 2-195 (203)
75 PF00702 Hydrolase: haloacid d 99.5 5.2E-13 1.1E-17 121.5 12.1 90 183-337 126-215 (215)
76 TIGR01668 YqeG_hyp_ppase HAD s 99.5 3.8E-13 8.2E-18 120.1 10.3 104 182-353 41-145 (170)
77 PRK11590 hypothetical protein; 99.4 3.6E-12 7.8E-17 117.6 16.8 193 83-346 5-205 (211)
78 COG0647 NagD Predicted sugar p 99.4 7.4E-13 1.6E-17 126.0 11.8 181 183-372 23-267 (269)
79 PF13242 Hydrolase_like: HAD-h 99.4 1.6E-13 3.4E-18 106.0 4.6 69 284-366 2-75 (75)
80 PRK11009 aphA acid phosphatase 99.4 7.1E-12 1.5E-16 117.6 13.5 107 183-355 113-223 (237)
81 TIGR01544 HAD-SF-IE haloacid d 99.3 6.7E-11 1.5E-15 113.0 14.6 141 151-336 78-230 (277)
82 PHA02530 pseT polynucleotide k 99.3 7.4E-12 1.6E-16 121.1 8.0 113 182-347 185-299 (300)
83 KOG1615 Phosphoserine phosphat 99.3 1.2E-11 2.6E-16 110.3 8.0 173 84-335 16-191 (227)
84 PRK08238 hypothetical protein; 99.3 9E-11 2E-15 120.7 14.9 98 182-346 70-167 (479)
85 PRK05446 imidazole glycerol-ph 99.2 2.9E-11 6.3E-16 119.6 9.5 110 183-346 29-150 (354)
86 TIGR01670 YrbI-phosphatas 3-de 99.2 4.8E-11 1E-15 104.9 8.7 104 192-367 36-139 (154)
87 TIGR01456 CECR5 HAD-superfamil 99.2 1.5E-10 3.3E-15 113.5 12.1 72 290-368 230-318 (321)
88 smart00577 CPDc catalytic doma 99.2 1.8E-11 3.9E-16 106.8 4.8 94 183-340 44-138 (148)
89 PRK10530 pyridoxal phosphate ( 99.2 2.7E-10 5.8E-15 108.2 11.7 59 306-367 204-262 (272)
90 COG2179 Predicted hydrolase of 99.1 8.9E-11 1.9E-15 102.6 7.1 98 180-346 42-140 (175)
91 TIGR02726 phenyl_P_delta pheny 99.1 1.7E-10 3.6E-15 103.1 8.1 102 192-365 42-143 (169)
92 TIGR01681 HAD-SF-IIIC HAD-supe 99.1 1.5E-10 3.3E-15 98.6 6.0 89 184-335 29-126 (128)
93 TIGR01545 YfhB_g-proteo haloac 99.1 2.2E-09 4.7E-14 99.2 13.5 110 184-346 94-204 (210)
94 PF12689 Acid_PPase: Acid Phos 99.1 5E-10 1.1E-14 99.8 8.9 103 183-349 44-156 (169)
95 TIGR01663 PNK-3'Pase polynucle 99.1 3.8E-10 8.2E-15 116.9 8.6 95 185-338 198-305 (526)
96 COG0241 HisB Histidinol phosph 99.0 9.3E-10 2E-14 98.8 9.6 130 184-367 31-173 (181)
97 PRK09484 3-deoxy-D-manno-octul 99.0 6.3E-10 1.4E-14 100.5 6.6 99 192-362 56-154 (183)
98 TIGR01460 HAD-SF-IIA Haloacid 99.0 5.1E-09 1.1E-13 98.3 11.7 41 306-346 194-236 (236)
99 PF08645 PNK3P: Polynucleotide 98.9 3.9E-09 8.5E-14 93.4 8.1 98 185-341 30-153 (159)
100 PF06888 Put_Phosphatase: Puta 98.9 2.6E-08 5.7E-13 93.2 14.1 128 182-348 69-201 (234)
101 PRK01158 phosphoglycolate phos 98.8 1.2E-08 2.6E-13 94.5 9.1 60 305-367 161-220 (230)
102 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.8 1.9E-09 4.2E-14 101.4 3.3 40 306-345 201-242 (242)
103 TIGR01533 lipo_e_P4 5'-nucleot 98.8 7.7E-08 1.7E-12 91.9 13.9 49 182-230 116-164 (266)
104 TIGR01482 SPP-subfamily Sucros 98.8 8.8E-09 1.9E-13 95.0 6.9 58 306-366 154-211 (225)
105 KOG2882 p-Nitrophenyl phosphat 98.8 1.5E-08 3.3E-13 96.5 8.6 82 278-367 210-300 (306)
106 KOG3120 Predicted haloacid deh 98.8 9.5E-08 2.1E-12 87.2 12.8 52 182-237 82-134 (256)
107 TIGR01686 FkbH FkbH-like domai 98.8 1.5E-08 3.3E-13 99.4 7.8 90 185-339 32-125 (320)
108 TIGR01512 ATPase-IB2_Cd heavy 98.8 2.1E-08 4.6E-13 105.0 8.9 113 183-369 361-477 (536)
109 PRK00192 mannosyl-3-phosphogly 98.7 2.6E-07 5.7E-12 88.4 15.4 71 306-376 195-272 (273)
110 TIGR01525 ATPase-IB_hvy heavy 98.7 2.1E-08 4.5E-13 105.6 8.2 113 183-369 383-498 (556)
111 PF12710 HAD: haloacid dehalog 98.7 7.8E-08 1.7E-12 86.1 10.7 41 187-230 92-132 (192)
112 PRK10513 sugar phosphate phosp 98.7 2E-09 4.4E-14 102.4 0.0 60 305-367 200-259 (270)
113 PRK15126 thiamin pyrimidine py 98.7 2.6E-09 5.6E-14 102.0 0.3 58 305-365 192-251 (272)
114 TIGR02244 HAD-IG-Ncltidse HAD 98.7 6E-08 1.3E-12 95.6 9.8 130 183-345 183-324 (343)
115 COG0561 Cof Predicted hydrolas 98.7 6.3E-09 1.4E-13 98.8 1.8 60 305-367 193-252 (264)
116 PRK03669 mannosyl-3-phosphogly 98.7 3.8E-08 8.2E-13 94.1 6.7 61 305-366 191-258 (271)
117 COG4229 Predicted enolase-phos 98.7 9.8E-07 2.1E-11 78.4 14.8 59 306-364 166-224 (229)
118 PLN02887 hydrolase family prot 98.6 3.3E-08 7.2E-13 103.9 6.4 60 305-367 511-570 (580)
119 KOG3040 Predicted sugar phosph 98.6 1.3E-07 2.7E-12 85.7 8.9 63 306-368 187-254 (262)
120 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.6 2.6E-07 5.6E-12 87.0 11.3 93 183-338 23-116 (242)
121 PTZ00445 p36-lilke protein; Pr 98.6 1.2E-07 2.6E-12 86.6 8.6 40 307-346 168-207 (219)
122 PRK10976 putative hydrolase; P 98.6 1.1E-08 2.5E-13 97.0 1.2 59 305-366 194-254 (266)
123 TIGR01487 SPP-like sucrose-pho 98.6 1.3E-07 2.9E-12 87.0 8.1 58 306-366 152-209 (215)
124 TIGR01511 ATPase-IB1_Cu copper 98.6 1E-07 2.2E-12 100.4 8.1 112 183-369 404-517 (562)
125 COG4359 Uncharacterized conser 98.5 1.3E-06 2.8E-11 77.8 12.3 55 182-239 71-126 (220)
126 TIGR02463 MPGP_rel mannosyl-3- 98.5 1.2E-07 2.5E-12 87.6 4.1 37 306-342 184-220 (221)
127 TIGR00099 Cof-subfamily Cof su 98.5 6.7E-08 1.5E-12 91.3 2.3 59 305-366 192-250 (256)
128 PRK10671 copA copper exporting 98.4 5.9E-07 1.3E-11 98.9 8.9 114 183-370 649-764 (834)
129 TIGR01684 viral_ppase viral ph 98.3 1E-06 2.3E-11 84.5 6.8 52 187-242 149-200 (301)
130 TIGR01522 ATPase-IIA2_Ca golgi 98.3 1.2E-06 2.7E-11 96.9 8.1 139 184-369 528-669 (884)
131 PF06941 NT5C: 5' nucleotidase 98.3 2.4E-06 5.2E-11 77.5 8.1 47 321-370 139-185 (191)
132 TIGR02251 HIF-SF_euk Dullard-l 98.3 3.6E-07 7.8E-12 81.0 2.0 98 183-344 41-139 (162)
133 PRK11033 zntA zinc/cadmium/mer 98.2 3.4E-06 7.4E-11 91.7 9.1 108 184-367 568-677 (741)
134 PF03767 Acid_phosphat_B: HAD 98.1 1.1E-05 2.4E-10 75.6 9.2 50 180-229 111-160 (229)
135 PF09419 PGP_phosphatase: Mito 98.1 1.8E-05 4E-10 70.4 9.4 96 185-347 60-167 (168)
136 TIGR02461 osmo_MPG_phos mannos 98.0 3.4E-06 7.5E-11 78.7 4.0 37 306-342 186-224 (225)
137 COG4087 Soluble P-type ATPase 98.0 1.7E-05 3.8E-10 67.0 7.2 120 183-372 29-148 (152)
138 PRK14010 potassium-transportin 98.0 3.4E-05 7.5E-10 82.6 10.4 111 184-368 441-553 (673)
139 PLN02177 glycerol-3-phosphate 97.9 0.00066 1.4E-08 70.5 18.4 104 185-346 111-217 (497)
140 COG1778 Low specificity phosph 97.9 2.3E-05 4.9E-10 68.3 6.3 101 192-365 43-144 (170)
141 TIGR01116 ATPase-IIA1_Ca sarco 97.9 4.4E-05 9.6E-10 85.0 10.1 138 184-367 537-679 (917)
142 PHA03398 viral phosphatase sup 97.9 2.7E-05 5.7E-10 75.0 7.1 48 187-237 151-198 (303)
143 TIGR01675 plant-AP plant acid 97.9 0.00013 2.9E-09 68.1 11.5 50 180-229 116-165 (229)
144 PRK14502 bifunctional mannosyl 97.9 0.00013 2.9E-09 77.5 12.6 48 305-353 617-666 (694)
145 smart00775 LNS2 LNS2 domain. T 97.9 0.00022 4.8E-09 62.9 11.7 39 185-223 28-66 (157)
146 COG2217 ZntA Cation transport 97.8 6.9E-05 1.5E-09 80.6 9.8 113 183-369 536-650 (713)
147 PRK01122 potassium-transportin 97.8 8E-05 1.7E-09 79.9 9.8 111 184-368 445-557 (679)
148 TIGR01680 Veg_Stor_Prot vegeta 97.8 0.00022 4.8E-09 68.0 11.3 49 180-228 141-189 (275)
149 PLN02382 probable sucrose-phos 97.8 7E-05 1.5E-09 76.2 7.7 43 305-347 179-224 (413)
150 TIGR01497 kdpB K+-transporting 97.7 0.00012 2.6E-09 78.4 9.5 105 184-362 446-550 (675)
151 PRK15122 magnesium-transportin 97.7 0.00015 3.1E-09 80.7 9.9 137 184-369 550-688 (903)
152 PF11019 DUF2608: Protein of u 97.7 0.0002 4.4E-09 68.0 9.4 117 184-346 81-211 (252)
153 COG4996 Predicted phosphatase 97.7 8.5E-05 1.8E-09 62.8 5.9 49 183-234 40-88 (164)
154 TIGR01524 ATPase-IIIB_Mg magne 97.7 0.00017 3.6E-09 79.9 9.8 132 184-367 515-651 (867)
155 PRK10517 magnesium-transportin 97.6 0.00019 4.2E-09 79.7 9.8 136 183-367 549-686 (902)
156 KOG2630 Enolase-phosphatase E- 97.5 0.0036 7.9E-08 57.9 14.5 62 306-367 186-249 (254)
157 PRK12702 mannosyl-3-phosphogly 97.5 0.00025 5.5E-09 68.4 6.5 43 306-349 213-257 (302)
158 TIGR01647 ATPase-IIIA_H plasma 97.4 0.00046 1E-08 75.4 9.1 139 184-366 442-582 (755)
159 TIGR01523 ATPase-IID_K-Na pota 97.4 0.00036 7.9E-09 78.7 8.5 140 183-368 645-796 (1053)
160 TIGR01517 ATPase-IIB_Ca plasma 97.4 0.0005 1.1E-08 76.9 8.9 136 184-369 579-720 (941)
161 PF08235 LNS2: LNS2 (Lipin/Ned 97.3 0.0019 4.2E-08 56.9 10.2 40 185-224 28-67 (157)
162 PF13344 Hydrolase_6: Haloacid 97.3 0.0033 7.1E-08 51.3 10.0 54 183-237 13-66 (101)
163 COG4030 Uncharacterized protei 97.2 0.012 2.5E-07 54.7 14.3 41 182-226 81-121 (315)
164 TIGR00685 T6PP trehalose-phosp 97.1 0.00086 1.9E-08 63.2 6.4 64 306-373 172-242 (244)
165 TIGR01106 ATPase-IIC_X-K sodiu 97.1 0.0013 2.8E-08 74.1 8.1 151 183-366 567-732 (997)
166 TIGR02250 FCP1_euk FCP1-like p 97.1 0.001 2.2E-08 58.7 5.5 52 183-238 57-109 (156)
167 COG3700 AphA Acid phosphatase 97.1 0.005 1.1E-07 55.0 9.7 39 318-356 185-224 (237)
168 PF05761 5_nucleotid: 5' nucle 97.0 0.0014 3.1E-08 67.2 7.1 130 183-344 182-324 (448)
169 TIGR01452 PGP_euk phosphoglyco 97.0 0.0094 2E-07 57.3 12.3 45 185-229 19-63 (279)
170 TIGR01652 ATPase-Plipid phosph 97.0 0.0013 2.7E-08 74.7 6.9 43 183-228 630-672 (1057)
171 COG0474 MgtA Cation transport 97.0 0.0028 6E-08 70.8 9.5 131 183-361 546-680 (917)
172 KOG0207 Cation transport ATPas 96.8 0.003 6.4E-08 68.5 7.6 113 183-369 722-836 (951)
173 PF08282 Hydrolase_3: haloacid 96.8 0.0014 3.1E-08 60.2 4.7 58 305-365 190-247 (254)
174 COG2503 Predicted secreted aci 96.7 0.013 2.8E-07 54.8 9.9 49 182-230 120-169 (274)
175 KOG0202 Ca2+ transporting ATPa 96.7 0.0039 8.5E-08 67.1 7.0 134 183-362 583-720 (972)
176 COG5663 Uncharacterized conser 96.6 0.0074 1.6E-07 53.4 7.2 30 321-350 137-167 (194)
177 TIGR01485 SPP_plant-cyano sucr 96.6 0.0042 9.1E-08 58.5 5.9 44 305-348 171-214 (249)
178 TIGR01657 P-ATPase-V P-type AT 96.5 0.019 4.1E-07 65.2 11.6 43 183-228 655-697 (1054)
179 TIGR01494 ATPase_P-type ATPase 96.4 0.022 4.8E-07 59.3 10.5 40 184-226 347-386 (499)
180 PLN03190 aminophospholipid tra 96.4 0.011 2.5E-07 67.4 8.9 42 183-227 725-766 (1178)
181 TIGR01658 EYA-cons_domain eyes 96.3 0.062 1.3E-06 50.5 11.6 48 305-352 218-265 (274)
182 TIGR01486 HAD-SF-IIB-MPGP mann 96.2 0.012 2.7E-07 55.5 7.0 62 305-367 180-247 (256)
183 TIGR02471 sucr_syn_bact_C sucr 96.1 0.0045 9.7E-08 57.7 3.4 57 306-365 164-224 (236)
184 TIGR01484 HAD-SF-IIB HAD-super 95.9 0.011 2.3E-07 53.7 4.7 37 305-341 167-203 (204)
185 PRK10187 trehalose-6-phosphate 95.7 0.026 5.7E-07 53.9 6.6 64 305-374 178-244 (266)
186 PF08282 Hydrolase_3: haloacid 95.4 0.035 7.6E-07 50.9 6.1 37 189-228 20-56 (254)
187 PF05116 S6PP: Sucrose-6F-phos 94.8 0.034 7.4E-07 52.6 4.4 44 305-349 169-212 (247)
188 TIGR01458 HAD-SF-IIA-hyp3 HAD- 94.3 0.33 7.1E-06 46.1 9.7 57 185-242 22-78 (257)
189 PF05822 UMPH-1: Pyrimidine 5' 93.9 0.28 6E-06 46.4 8.3 60 174-237 80-139 (246)
190 KOG2116 Protein involved in pl 93.9 0.23 5E-06 52.5 8.2 37 303-339 635-672 (738)
191 PTZ00174 phosphomannomutase; P 93.6 0.053 1.2E-06 51.1 2.9 37 306-346 193-233 (247)
192 PF13344 Hydrolase_6: Haloacid 93.2 0.28 6E-06 39.8 6.2 32 87-118 1-33 (101)
193 PF03031 NIF: NLI interacting 93.2 0.09 1.9E-06 45.8 3.5 48 183-234 35-83 (159)
194 COG2216 KdpB High-affinity K+ 93.1 0.16 3.4E-06 52.5 5.4 45 185-232 448-492 (681)
195 PLN02499 glycerol-3-phosphate 92.6 1 2.2E-05 46.7 10.6 33 192-228 101-134 (498)
196 TIGR01460 HAD-SF-IIA Haloacid 92.6 1.4 3.1E-05 41.1 10.9 49 184-232 14-63 (236)
197 COG5610 Predicted hydrolase (H 92.6 0.65 1.4E-05 47.4 8.9 103 183-343 98-201 (635)
198 PRK10187 trehalose-6-phosphate 92.2 0.34 7.3E-06 46.3 6.4 35 187-224 39-74 (266)
199 PRK14501 putative bifunctional 92.2 0.23 5E-06 54.2 5.8 64 305-374 661-724 (726)
200 PLN02423 phosphomannomutase 91.9 0.13 2.9E-06 48.5 3.1 37 310-347 194-234 (245)
201 COG5083 SMP2 Uncharacterized p 91.9 0.57 1.2E-05 47.5 7.5 35 305-339 481-516 (580)
202 KOG1618 Predicted phosphatase 91.7 1.2 2.5E-05 43.6 9.2 27 315-342 118-144 (389)
203 KOG0204 Calcium transporting A 91.4 0.73 1.6E-05 50.3 8.2 43 183-228 646-688 (1034)
204 PTZ00174 phosphomannomutase; P 90.2 0.16 3.5E-06 47.8 1.9 36 82-118 3-41 (247)
205 KOG2134 Polynucleotide kinase 89.8 0.49 1.1E-05 47.3 4.8 26 185-210 105-130 (422)
206 KOG2961 Predicted hydrolase (H 89.4 1.1 2.4E-05 39.3 6.2 36 315-350 137-173 (190)
207 PLN02423 phosphomannomutase 89.1 0.42 9.2E-06 45.0 3.8 31 82-113 4-35 (245)
208 KOG2470 Similar to IMP-GMP spe 88.9 0.56 1.2E-05 46.3 4.5 125 185-343 241-374 (510)
209 PF06189 5-nucleotidase: 5'-nu 88.5 6.6 0.00014 37.5 11.2 27 321-348 236-262 (264)
210 PLN02580 trehalose-phosphatase 88.5 1.1 2.5E-05 45.1 6.6 66 305-375 305-378 (384)
211 TIGR01689 EcbF-BcbF capsule bi 88.2 0.29 6.2E-06 41.7 1.8 26 185-210 25-50 (126)
212 KOG0206 P-type ATPase [General 88.0 1.6 3.5E-05 49.7 7.9 43 183-228 650-692 (1151)
213 TIGR02245 HAD_IIID1 HAD-superf 87.4 0.49 1.1E-05 43.3 2.9 39 185-227 46-84 (195)
214 TIGR01670 YrbI-phosphatas 3-de 86.8 0.32 6.9E-06 42.4 1.3 15 84-98 1-15 (154)
215 COG0647 NagD Predicted sugar p 86.1 1.4 3.1E-05 42.3 5.4 38 81-118 5-43 (269)
216 TIGR02726 phenyl_P_delta pheny 86.0 0.4 8.6E-06 42.8 1.5 18 82-99 5-22 (169)
217 PLN03017 trehalose-phosphatase 84.5 2 4.4E-05 43.0 5.9 67 305-375 287-360 (366)
218 PRK09484 3-deoxy-D-manno-octul 84.2 0.5 1.1E-05 42.4 1.3 16 83-98 20-35 (183)
219 COG1778 Low specificity phosph 84.1 0.51 1.1E-05 41.6 1.2 60 81-152 5-76 (170)
220 PLN02205 alpha,alpha-trehalose 84.0 2.2 4.7E-05 47.6 6.4 63 306-374 767-845 (854)
221 PRK14501 putative bifunctional 83.7 1.8 4E-05 47.3 5.7 33 187-222 517-550 (726)
222 KOG0203 Na+/K+ ATPase, alpha s 83.6 3 6.5E-05 45.8 6.9 41 183-226 589-629 (1019)
223 PLN02580 trehalose-phosphatase 83.1 2.3 5.1E-05 42.9 5.7 33 185-221 142-174 (384)
224 TIGR01681 HAD-SF-IIIC HAD-supe 82.5 0.71 1.5E-05 38.9 1.5 15 85-99 1-15 (128)
225 PRK00192 mannosyl-3-phosphogly 81.8 2.2 4.8E-05 40.5 4.8 42 186-230 23-64 (273)
226 KOG0209 P-type ATPase [Inorgan 81.5 2.7 5.9E-05 46.0 5.7 156 182-347 673-836 (1160)
227 TIGR01456 CECR5 HAD-superfamil 80.6 9 0.00019 37.6 8.7 43 185-227 17-64 (321)
228 COG4502 5'(3')-deoxyribonucleo 80.0 2.7 5.8E-05 36.5 4.1 26 183-209 67-92 (180)
229 KOG0210 P-type ATPase [Inorgan 78.6 22 0.00048 38.6 11.1 40 184-226 658-697 (1051)
230 KOG4549 Magnesium-dependent ph 77.9 10 0.00023 32.3 6.9 45 184-230 44-88 (144)
231 TIGR02461 osmo_MPG_phos mannos 76.8 4.7 0.0001 37.4 5.2 40 186-228 17-56 (225)
232 TIGR02463 MPGP_rel mannosyl-3- 76.6 4.3 9.3E-05 37.0 4.8 36 189-227 21-56 (221)
233 TIGR01487 SPP-like sucrose-pho 76.0 4.4 9.4E-05 36.9 4.7 42 185-229 19-60 (215)
234 PRK08942 D,D-heptose 1,7-bisph 74.8 1.8 3.9E-05 38.4 1.8 17 83-99 2-18 (181)
235 TIGR00213 GmhB_yaeD D,D-heptos 74.2 3 6.6E-05 36.9 3.1 13 85-97 2-14 (176)
236 PRK01158 phosphoglycolate phos 72.9 5.9 0.00013 36.2 4.8 40 187-229 23-62 (230)
237 PF03031 NIF: NLI interacting 72.4 1.9 4.2E-05 37.3 1.3 17 85-101 1-17 (159)
238 PF09419 PGP_phosphatase: Mito 72.1 3 6.6E-05 37.2 2.5 20 81-100 38-57 (168)
239 KOG2469 IMP-GMP specific 5'-nu 72.1 6.3 0.00014 39.8 4.9 122 187-346 201-335 (424)
240 TIGR00099 Cof-subfamily Cof su 71.8 6.9 0.00015 36.6 5.0 41 185-228 17-57 (256)
241 PRK10513 sugar phosphate phosp 70.7 8 0.00017 36.3 5.3 39 187-228 23-61 (270)
242 KOG3107 Predicted haloacid deh 70.6 1.2E+02 0.0025 30.8 13.2 41 305-346 413-453 (468)
243 PRK15126 thiamin pyrimidine py 70.3 6.8 0.00015 37.0 4.7 41 186-229 21-61 (272)
244 KOG3128 Uncharacterized conser 70.2 13 0.00027 35.5 6.2 41 182-225 136-176 (298)
245 PRK10976 putative hydrolase; P 69.5 7.4 0.00016 36.5 4.8 40 187-229 22-61 (266)
246 COG0561 Cof Predicted hydrolas 69.5 7.9 0.00017 36.3 4.9 42 184-228 20-61 (264)
247 PRK10530 pyridoxal phosphate ( 69.5 7.9 0.00017 36.3 4.9 40 186-228 22-61 (272)
248 TIGR00685 T6PP trehalose-phosp 69.4 2.6 5.7E-05 39.4 1.6 15 84-98 3-17 (244)
249 KOG3189 Phosphomannomutase [Li 69.2 15 0.00033 33.8 6.3 30 84-114 11-40 (252)
250 TIGR01486 HAD-SF-IIB-MPGP mann 69.0 8.8 0.00019 36.0 5.1 39 187-228 19-57 (256)
251 TIGR02329 propionate_PrpR prop 69.0 39 0.00084 35.7 10.4 32 310-346 141-172 (526)
252 TIGR01689 EcbF-BcbF capsule bi 67.8 9 0.0002 32.5 4.4 15 84-98 1-15 (126)
253 TIGR01482 SPP-subfamily Sucros 67.5 9.1 0.0002 34.7 4.8 41 185-228 16-56 (225)
254 PF06506 PrpR_N: Propionate ca 67.2 14 0.00031 32.7 5.9 25 321-346 128-152 (176)
255 PF05152 DUF705: Protein of un 66.7 11 0.00024 36.4 5.2 51 185-238 143-193 (297)
256 COG0731 Fe-S oxidoreductases [ 65.1 23 0.0005 34.5 7.1 32 179-210 87-119 (296)
257 PRK12702 mannosyl-3-phosphogly 64.4 11 0.00024 36.8 4.8 39 188-229 22-60 (302)
258 COG3769 Predicted hydrolase (H 63.8 12 0.00025 35.1 4.5 26 319-345 211-236 (274)
259 COG4850 Uncharacterized conser 63.5 28 0.00061 34.4 7.3 30 182-211 194-224 (373)
260 COG3882 FkbH Predicted enzyme 63.5 34 0.00074 35.6 8.2 93 185-338 256-348 (574)
261 PRK00994 F420-dependent methyl 63.1 78 0.0017 30.0 9.8 46 306-354 79-128 (277)
262 PRK15424 propionate catabolism 62.1 61 0.0013 34.4 10.2 32 310-346 151-182 (538)
263 PRK03669 mannosyl-3-phosphogly 60.8 13 0.00029 35.1 4.7 37 188-227 28-64 (271)
264 PRK06769 hypothetical protein; 60.3 8.7 0.00019 34.0 3.1 16 83-98 3-18 (173)
265 KOG0323 TFIIF-interacting CTD 60.2 13 0.00027 40.0 4.7 53 183-239 200-253 (635)
266 TIGR01668 YqeG_hyp_ppase HAD s 59.7 7.6 0.00016 34.3 2.6 19 82-100 23-41 (170)
267 PLN03017 trehalose-phosphatase 58.4 25 0.00055 35.3 6.3 14 84-97 111-124 (366)
268 cd04728 ThiG Thiazole synthase 58.3 99 0.0021 29.4 9.8 40 306-349 167-209 (248)
269 PRK00208 thiG thiazole synthas 57.9 1E+02 0.0022 29.4 9.8 40 306-349 167-209 (250)
270 PF05116 S6PP: Sucrose-6F-phos 56.8 9.2 0.0002 36.0 2.8 28 84-112 2-29 (247)
271 COG2179 Predicted hydrolase of 56.4 9.5 0.00021 34.1 2.6 36 82-117 26-64 (175)
272 COG2099 CobK Precorrin-6x redu 55.8 85 0.0018 30.0 8.9 57 308-374 190-252 (257)
273 COG0036 Rpe Pentose-5-phosphat 53.9 1.8E+02 0.0039 27.1 10.6 43 183-226 92-134 (220)
274 PLN02151 trehalose-phosphatase 53.0 30 0.00066 34.6 5.8 67 305-375 273-346 (354)
275 TIGR01261 hisB_Nterm histidino 52.6 8.1 0.00018 34.0 1.6 16 85-100 2-17 (161)
276 KOG2882 p-Nitrophenyl phosphat 51.0 33 0.00071 33.5 5.5 36 82-117 20-56 (306)
277 cd00733 GlyRS_alpha_core Class 50.5 15 0.00032 34.9 2.9 50 292-344 80-132 (279)
278 TIGR02495 NrdG2 anaerobic ribo 50.1 1.8E+02 0.0038 25.7 9.9 26 185-210 75-100 (191)
279 PLN02151 trehalose-phosphatase 49.8 13 0.00029 37.1 2.7 16 83-98 97-112 (354)
280 TIGR03470 HpnH hopanoid biosyn 49.4 85 0.0018 30.7 8.3 28 183-210 83-110 (318)
281 TIGR01484 HAD-SF-IIB HAD-super 49.3 26 0.00055 31.3 4.4 37 185-224 18-54 (204)
282 KOG1618 Predicted phosphatase 49.0 15 0.00033 36.1 2.9 34 316-349 296-345 (389)
283 PLN02205 alpha,alpha-trehalose 48.7 13 0.00029 41.5 2.8 17 83-99 595-611 (854)
284 PRK09348 glyQ glycyl-tRNA synt 48.0 17 0.00036 34.6 2.9 50 292-344 84-136 (283)
285 COG1877 OtsB Trehalose-6-phosp 45.9 12 0.00026 36.0 1.7 44 306-349 187-233 (266)
286 PRK11840 bifunctional sulfur c 45.7 2.8E+02 0.006 27.5 11.0 39 306-348 241-282 (326)
287 TIGR00388 glyQ glycyl-tRNA syn 45.2 20 0.00044 34.2 3.0 50 292-344 81-133 (293)
288 PF02254 TrkA_N: TrkA-N domain 44.7 1.6E+02 0.0034 23.4 9.7 26 318-343 90-115 (116)
289 PRK13762 tRNA-modifying enzyme 44.4 74 0.0016 31.3 7.0 29 182-210 140-168 (322)
290 COG1817 Uncharacterized protei 43.6 1.8E+02 0.004 28.8 9.3 100 189-329 16-116 (346)
291 cd01766 Ufm1 Urm1-like ubiquit 43.0 32 0.0007 26.4 3.2 42 294-338 23-64 (82)
292 smart00577 CPDc catalytic doma 41.5 17 0.00036 31.2 1.8 16 85-100 3-18 (148)
293 PF04123 DUF373: Domain of unk 41.5 97 0.0021 31.0 7.3 36 306-343 90-127 (344)
294 TIGR01686 FkbH FkbH-like domai 41.4 15 0.00033 35.9 1.7 16 83-98 2-17 (320)
295 PF02350 Epimerase_2: UDP-N-ac 40.6 1.3E+02 0.0028 29.8 8.2 37 306-349 252-289 (346)
296 TIGR02245 HAD_IIID1 HAD-superf 40.4 20 0.00044 32.7 2.2 24 316-339 128-151 (195)
297 KOG0205 Plasma membrane H+-tra 39.9 90 0.0019 34.0 7.0 138 184-365 492-629 (942)
298 PTZ00445 p36-lilke protein; Pr 39.6 22 0.00047 33.1 2.3 15 83-97 42-56 (219)
299 TIGR02468 sucrsPsyn_pln sucros 39.3 29 0.00064 39.6 3.7 41 304-345 959-1002(1050)
300 PRK08005 epimerase; Validated 39.1 3.1E+02 0.0066 25.3 9.8 35 187-222 93-127 (210)
301 PF02358 Trehalose_PPase: Treh 38.2 57 0.0012 30.1 5.0 57 305-362 169-233 (235)
302 PF07859 Abhydrolase_3: alpha/ 37.6 21 0.00046 31.7 1.9 34 294-327 44-80 (211)
303 TIGR02826 RNR_activ_nrdG3 anae 36.5 55 0.0012 28.4 4.2 26 185-210 73-98 (147)
304 PF05152 DUF705: Protein of un 36.1 23 0.00051 34.3 2.0 19 82-100 120-138 (297)
305 PLN02887 hydrolase family prot 35.3 51 0.0011 35.3 4.5 41 184-227 325-365 (580)
306 TIGR01485 SPP_plant-cyano sucr 34.5 43 0.00094 31.1 3.5 39 187-228 24-62 (249)
307 cd06831 PLPDE_III_ODC_like_AZI 32.5 3.3E+02 0.007 27.5 9.7 34 312-345 75-110 (394)
308 PF02358 Trehalose_PPase: Treh 32.5 20 0.00044 33.1 0.9 13 88-100 1-13 (235)
309 PF13580 SIS_2: SIS domain; PD 32.1 2.3E+02 0.0049 23.9 7.3 127 165-345 1-138 (138)
310 PF03671 Ufm1: Ubiquitin fold 32.1 15 0.00032 28.1 -0.1 35 294-331 23-57 (76)
311 PRK14502 bifunctional mannosyl 31.7 70 0.0015 34.9 4.9 40 186-228 435-474 (694)
312 TIGR02251 HIF-SF_euk Dullard-l 31.3 27 0.00059 30.6 1.5 16 85-100 2-17 (162)
313 PF10307 DUF2410: Hypothetical 29.4 4E+02 0.0087 24.4 8.8 30 306-336 123-152 (197)
314 COG1363 FrvX Cellulase M and r 29.0 2E+02 0.0044 28.8 7.3 65 300-369 269-335 (355)
315 PRK13125 trpA tryptophan synth 28.5 3.8E+02 0.0082 25.0 8.8 29 320-348 187-218 (244)
316 PF06014 DUF910: Bacterial pro 28.4 41 0.00088 25.0 1.7 25 306-334 7-31 (62)
317 PF04413 Glycos_transf_N: 3-De 27.7 1.5E+02 0.0032 26.6 5.7 42 306-349 87-130 (186)
318 PRK05301 pyrroloquinoline quin 27.7 1.2E+02 0.0027 30.1 5.7 45 182-227 72-116 (378)
319 COG0604 Qor NADPH:quinone redu 27.5 1.1E+02 0.0025 29.9 5.3 72 304-375 129-208 (326)
320 TIGR02109 PQQ_syn_pqqE coenzym 27.1 1.3E+02 0.0028 29.7 5.6 44 183-227 64-107 (358)
321 PF04007 DUF354: Protein of un 27.0 4.9E+02 0.011 25.8 9.6 36 190-229 17-52 (335)
322 COG0752 GlyQ Glycyl-tRNA synth 26.8 57 0.0012 30.9 2.8 48 292-342 85-135 (298)
323 TIGR02250 FCP1_euk FCP1-like p 26.5 42 0.00091 29.3 1.8 18 84-101 6-23 (156)
324 PRK10537 voltage-gated potassi 25.7 7E+02 0.015 25.3 10.7 19 190-208 253-271 (393)
325 PF04413 Glycos_transf_N: 3-De 25.7 1.1E+02 0.0025 27.4 4.5 23 308-330 162-184 (186)
326 PF06437 ISN1: IMP-specific 5' 25.4 62 0.0013 32.8 2.9 40 306-347 354-402 (408)
327 COG2237 Predicted membrane pro 25.4 2E+02 0.0044 28.9 6.4 23 307-331 91-113 (364)
328 cd07043 STAS_anti-anti-sigma_f 25.1 1.4E+02 0.0031 22.6 4.6 38 190-232 60-97 (99)
329 PF05343 Peptidase_M42: M42 gl 25.1 1.9E+02 0.0042 28.0 6.3 50 296-346 219-270 (292)
330 PF02606 LpxK: Tetraacyldisacc 25.1 1.3E+02 0.0029 29.6 5.2 24 186-209 51-74 (326)
331 PF02879 PGM_PMM_II: Phosphogl 25.0 3.4E+02 0.0074 21.3 8.9 34 192-226 13-46 (104)
332 KOG2832 TFIIF-interacting CTD 24.9 1.3E+02 0.0028 30.3 5.0 51 183-237 213-263 (393)
333 PRK10076 pyruvate formate lyas 24.8 1.3E+02 0.0029 27.7 4.9 26 185-210 51-77 (213)
334 TIGR03365 Bsubt_queE 7-cyano-7 24.6 64 0.0014 30.2 2.8 26 185-210 85-110 (238)
335 PLN03063 alpha,alpha-trehalose 24.3 44 0.00096 37.2 1.9 64 306-375 683-785 (797)
336 PRK15317 alkyl hydroperoxide r 24.2 2.4E+02 0.0051 29.5 7.2 29 317-345 211-242 (517)
337 PF05690 ThiG: Thiazole biosyn 24.1 6.3E+02 0.014 24.0 9.4 99 183-347 103-207 (247)
338 PLN03064 alpha,alpha-trehalose 24.0 42 0.00092 38.0 1.7 17 83-99 590-606 (934)
339 COG0241 HisB Histidinol phosph 23.9 50 0.0011 29.9 1.8 17 84-100 5-21 (181)
340 KOG3483 Uncharacterized conser 23.2 78 0.0017 24.4 2.5 42 294-338 34-75 (94)
341 TIGR02886 spore_II_AA anti-sig 22.4 1.8E+02 0.004 22.8 4.8 37 190-231 61-97 (106)
342 CHL00162 thiG thiamin biosynth 22.4 7E+02 0.015 24.0 9.8 100 183-348 117-222 (267)
343 TIGR02244 HAD-IG-Ncltidse HAD 22.3 82 0.0018 31.4 3.1 22 79-100 7-28 (343)
344 cd05008 SIS_GlmS_GlmD_1 SIS (S 22.1 91 0.002 25.3 3.0 25 186-210 59-83 (126)
345 TIGR03568 NeuC_NnaA UDP-N-acet 21.9 7.8E+02 0.017 24.3 10.1 34 306-345 275-308 (365)
346 PF02091 tRNA-synt_2e: Glycyl- 21.8 86 0.0019 30.1 3.0 47 292-341 79-128 (284)
347 COG0019 LysA Diaminopimelate d 21.6 2.6E+02 0.0057 28.4 6.7 40 306-346 86-127 (394)
348 cd05014 SIS_Kpsf KpsF-like pro 21.6 1E+02 0.0022 25.1 3.2 25 186-210 60-84 (128)
349 PRK05446 imidazole glycerol-ph 20.9 58 0.0013 32.6 1.8 16 84-99 2-17 (354)
350 KOG1605 TFIIF-interacting CTD 20.3 20 0.00043 34.4 -1.6 40 183-226 130-169 (262)
351 COG4275 Uncharacterized conser 20.0 55 0.0012 27.9 1.2 37 79-117 40-76 (143)
No 1
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=8.7e-28 Score=231.67 Aligned_cols=226 Identities=31% Similarity=0.546 Sum_probs=163.5
Q ss_pred CCccEEEEeccccccccc-ccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCC----CCCC-
Q 017067 82 PRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWP----TSVP- 155 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~-~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~----~~l~- 155 (378)
.++++|||||||||+|+. .. +..+|+++++++|++...++.+.+..+.. .++....+... +...+++ ...+
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLN-IGGGKERMTWY-FNENGWPTSTIEKAPK 114 (286)
T ss_pred cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHH-HHHcCCCccccccCCc
Confidence 457999999999999999 86 88999999999998422355555554543 33334444333 3345554 1121
Q ss_pred -chhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh-e
Q 017067 156 -TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-K 233 (378)
Q Consensus 156 -~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~-~ 233 (378)
.++....++.+.+.+.+.|.+.+....++++||+.++|+.|+++|++++|+||+. ......+++.++...+|+. .
T Consensus 115 ~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~---~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSN---EKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhccccccCceE
Confidence 2222333444555555666666533446899999999999999999999999954 5777778877654444442 2
Q ss_pred eechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc
Q 017067 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (378)
Q Consensus 234 iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l 313 (378)
+++++++. ..||+|++ |..+++++
T Consensus 192 ~v~~~~~~------------------------------------------~~KP~p~~--------------~~~a~~~~ 215 (286)
T PLN02779 192 VFAGDDVP------------------------------------------KKKPDPDI--------------YNLAAETL 215 (286)
T ss_pred EEeccccC------------------------------------------CCCCCHHH--------------HHHHHHHh
Confidence 23332221 12777666 99999999
Q ss_pred CCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 314 gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
|++|++|+||||+.+|+++|+++||++|++.++.....++..+|++++++.++...
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 99999999999999999999999999999999877777787899999999998643
No 2
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=6.9e-28 Score=227.62 Aligned_cols=223 Identities=16% Similarity=0.211 Sum_probs=157.4
Q ss_pred CCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCC-CCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
...+++++|+|||||||+|+... +..+|.++++++|++. ..++.+.+...+ .+.........+ +.. .. +
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~--~G~~~~~~~~~~---~~~--~~--~ 86 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENI--AGKHNEDIALGL---FPD--DL--E 86 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHc--CCCCHHHHHHHH---cCc--ch--h
Confidence 33456899999999999999987 8899999999997531 013333322211 122222222111 111 10 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
. ...+...+...|.+.. .....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+. +++.
T Consensus 87 ~----~~~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~-iv~~ 157 (248)
T PLN02770 87 R----GLKFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNA---PRENAELMISLLGLSDFFQA-VIIG 157 (248)
T ss_pred h----HHHHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCChhhCcE-EEec
Confidence 0 1122334445555544 345789999999999999999999999995 46889999999999999988 4555
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |..+++++|++|
T Consensus 158 ~~~~~------------------------------------------~KP~p~~--------------~~~a~~~~~~~~ 181 (248)
T PLN02770 158 SECEH------------------------------------------AKPHPDP--------------YLKALEVLKVSK 181 (248)
T ss_pred CcCCC------------------------------------------CCCChHH--------------HHHHHHHhCCCh
Confidence 44322 1666665 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchH--HHHHHhhcc
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADL--TISKLRHSQ 377 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~--~~~~l~~~~ 377 (378)
++|+||||+.+|+++|+++||++|++.++... .++ ..++++++++.++.. .+..+.++|
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~-~~l~~~~a~~vi~~~~e~~~~~~~~~~~~~~ 244 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPE-SLLMEAKPTFLIKDYEDPKLWAALEELDQKG 244 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCH-HHHhhcCCCEEeccchhhHHHHHHhhccccc
Confidence 99999999999999999999999999987533 233 358999999999543 355555443
No 3
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.96 E-value=1.1e-27 Score=222.69 Aligned_cols=210 Identities=23% Similarity=0.301 Sum_probs=150.0
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++++|||||||||+||+.. +..+|.++++++|+. .+.+.+.... ++...+....+....+-.....
T Consensus 1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~------- 66 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELH---GGGIARIIDLLRKLAAGEDPAD------- 66 (221)
T ss_pred CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHH---CCChHHHHHHHHHHhcCCcccC-------
Confidence 3689999999999999998 999999999999987 4544544443 2233333333443333221111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
........... ........+++||+.++|++|+++|+++++.|++ ....+...++.+|+.++|+. +++++++.+
T Consensus 67 ~~~~~~~~~~~--~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s---~~~~~~~~L~~~gl~~~f~~-~v~~~dv~~ 140 (221)
T COG0637 67 LAELERLLYEA--EALELEGLKPIPGVVELLEQLKARGIPLAVASSS---PRRAAERVLARLGLLDYFDV-IVTADDVAR 140 (221)
T ss_pred HHHHHHHHHHH--HHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCC---hHHHHHHHHHHccChhhcch-hccHHHHhc
Confidence 00111111111 1122346789999999999999999999999994 45789999999999999998 455555543
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+||+ |..+++++|++|++||+
T Consensus 141 ------------------------------------------~KP~Pd~--------------yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 141 ------------------------------------------GKPAPDI--------------YLLAAERLGVDPEECVV 164 (221)
T ss_pred ------------------------------------------CCCCCHH--------------HHHHHHHcCCChHHeEE
Confidence 2888888 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCC----CCCCCCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSR----AEFPSANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~----~~l~~ad~vi~~l~e~~~ 368 (378)
|+|+.++|++|++|||.+|++..+.... .....++.+..++.++..
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPA 214 (221)
T ss_pred EecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHH
Confidence 9999999999999999999999854421 111224555555555543
No 4
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.95 E-value=1.8e-27 Score=219.68 Aligned_cols=211 Identities=16% Similarity=0.170 Sum_probs=158.4
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+++|+||+||||+|+... +..+|+++++++|++ .+...+.... .+.....+...+....+.+. + ..
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~----~~ 66 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLS---PTPEEVQSAW--MGQSKIEAIRALLALDGADE----A----EA 66 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCC---CCHHHHHHhh--cCCCHHHHHHHHHhccCCCH----H----HH
Confidence 478999999999999997 899999999999987 3433333311 12233344444554445321 1 13
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc--ccchheeechhhHH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVE 241 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~--~~f~~~iv~~~~~~ 241 (378)
+.+.+.+.+.+.+.+.....+++||+.++|+.|+++|++++|+||+ .......+++.+|+. .+|+. +++.+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~-i~~~~~~~ 142 (220)
T TIGR03351 67 QAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDA-VVCPSDVA 142 (220)
T ss_pred HHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCE-EEcCCcCC
Confidence 3445555555655553445689999999999999999999999994 468889999999998 89987 44544432
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC-CCcE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 320 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~-p~~~ 320 (378)
. .||+|++ |..+++++|+. |++|
T Consensus 143 ~------------------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~~ 166 (220)
T TIGR03351 143 A------------------------------------------GRPAPDL--------------ILRAMELTGVQDVQSV 166 (220)
T ss_pred C------------------------------------------CCCCHHH--------------HHHHHHHcCCCChhHe
Confidence 1 2666666 99999999997 7999
Q ss_pred EEEeCCHhHHHHHHHcCCCE-EEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 321 FLIAGSQSGVAGAQRIGMPC-VVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+||||+.+|+++|+++||++ |++.++......+. .++++++++.++..
T Consensus 167 ~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 167 AVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred EEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 99999999999999999999 89988766555443 47999999988754
No 5
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.95 E-value=2.5e-27 Score=223.84 Aligned_cols=212 Identities=17% Similarity=0.135 Sum_probs=153.2
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHH----------HHHHHHHHcCCCCC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWPTS 153 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~~~ 153 (378)
+++||||+||||+|+....+..+|++++.++|++ ++.+.+...++ ..... ....+...++.+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMG---LGKWDHIRALLKMPAVAERWRAKFGRLP- 74 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcC---ccHHHHHHHHhcCHHHHHHHHHHhCCCC-
Confidence 6899999999999986533578999999999986 45444433321 11111 1222334444321
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc-hh
Q 017067 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI 232 (378)
Q Consensus 154 l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f-~~ 232 (378)
+.+ .+..+.+.+.+.+.+.+ .....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+| +.
T Consensus 75 -~~~----~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~~~f~d~ 145 (253)
T TIGR01422 75 -TEA----DIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQGYRPDY 145 (253)
T ss_pred -CHH----HHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhcCCCCce
Confidence 111 23344445555444444 345789999999999999999999999994 468889999999999986 55
Q ss_pred eeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHH
Q 017067 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (378)
Q Consensus 233 ~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~ 312 (378)
+++.+++.. .||+|++ |..++++
T Consensus 146 -ii~~~~~~~------------------------------------------~KP~p~~--------------~~~a~~~ 168 (253)
T TIGR01422 146 -NVTTDDVPA------------------------------------------GRPAPWM--------------ALKNAIE 168 (253)
T ss_pred -EEccccCCC------------------------------------------CCCCHHH--------------HHHHHHH
Confidence 556554422 2666666 9999999
Q ss_pred cCCC-CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC-----------------------CCCC--CCCcEEecCCCcc
Q 017067 313 AEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS-----------------------RAEF--PSANAVMDGFGGA 366 (378)
Q Consensus 313 lgv~-p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----------------------~~~l--~~ad~vi~~l~e~ 366 (378)
+|+. |++|++|||+.+|+++|+++||.+|+|.++... ..++ ..||+|++++.++
T Consensus 169 l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el 248 (253)
T TIGR01422 169 LGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAEL 248 (253)
T ss_pred cCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHH
Confidence 9995 999999999999999999999999999988652 1233 3489999999997
Q ss_pred hH
Q 017067 367 DL 368 (378)
Q Consensus 367 ~~ 368 (378)
..
T Consensus 249 ~~ 250 (253)
T TIGR01422 249 PA 250 (253)
T ss_pred HH
Confidence 54
No 6
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.95 E-value=3.6e-27 Score=224.41 Aligned_cols=214 Identities=20% Similarity=0.255 Sum_probs=154.4
Q ss_pred CCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhH-HHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
.....+++|||||||||+|+....+..+|+++++++|++ ++... +..+. +......+..+ +++.. . .
T Consensus 19 ~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~---~~~~e~~~~~~---G~~~~~~~~~l---~~~~~--~-~ 86 (260)
T PLN03243 19 RLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKR---PPPAFLLKRAE---GMKNEQAISEV---LCWSR--D-F 86 (260)
T ss_pred HhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCC---CCHHHHHHHhc---CCCHHHHHHHH---hccCC--C-H
Confidence 344678999999999999996422678999999999987 33322 22222 22222222222 22211 1 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
..+..+...+...+.. .......++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|+. ++++
T Consensus 87 ---~~~~~l~~~~~~~~~~-~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~-ii~~ 158 (260)
T PLN03243 87 ---LQMKRLAIRKEDLYEY-MQGGLYRLRPGSREFVQALKKHEIPIAVASTRP---RRYLERAIEAVGMEGFFSV-VLAA 158 (260)
T ss_pred ---HHHHHHHHHHHHHHHH-HHccCcccCCCHHHHHHHHHHCCCEEEEEeCcC---HHHHHHHHHHcCCHhhCcE-EEec
Confidence 1133444444444432 223457789999999999999999999999954 5888999999999999998 4444
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |..+++++|++|
T Consensus 159 ~d~~~------------------------------------------~KP~Pe~--------------~~~a~~~l~~~p 182 (260)
T PLN03243 159 EDVYR------------------------------------------GKPDPEM--------------FMYAAERLGFIP 182 (260)
T ss_pred ccCCC------------------------------------------CCCCHHH--------------HHHHHHHhCCCh
Confidence 44321 2777666 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
++|+||||+.+|+++|+++||++|++. +......+..++++++++.++...
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHHHHHH
Confidence 999999999999999999999999997 444445666799999999998654
No 7
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=3.3e-27 Score=220.30 Aligned_cols=210 Identities=18% Similarity=0.196 Sum_probs=154.3
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+++||||+||||+|+... +..+|+.+++++|.+. ++.+.+....+. ......... .+ . ++.++
T Consensus 11 ~~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~---~~~~~~~~~---~~--~-~~~~~---- 74 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP--ITLAQLRPVVSK---GARAMLAVA---FP--E-LDAAA---- 74 (229)
T ss_pred cCCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhhh---HHHHHHHHH---hc--c-CChHH----
Confidence 4689999999999999987 8899999999999873 555554444321 122221111 11 1 11111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
.+.+.+.+.+.|.+.+ ....+++||+.++|+.|+++|++++|+||+. ...+..+++.+|+..+|+. +++.+++..
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~~~f~~-i~~~~~~~~ 149 (229)
T PRK13226 75 RDALIPEFLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWEQRCAV-LIGGDTLAE 149 (229)
T ss_pred HHHHHHHHHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCchhcccE-EEecCcCCC
Confidence 2344455555565544 2346799999999999999999999999954 5777889999999999986 444433211
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++|++
T Consensus 150 ------------------------------------------~KP~p~~--------------~~~~~~~l~~~p~~~l~ 173 (229)
T PRK13226 150 ------------------------------------------RKPHPLP--------------LLVAAERIGVAPTDCVY 173 (229)
T ss_pred ------------------------------------------CCCCHHH--------------HHHHHHHhCCChhhEEE
Confidence 2666666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCC-CCC--CCCcEEecCCCcchHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSR-AEF--PSANAVMDGFGGADLT 369 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~l--~~ad~vi~~l~e~~~~ 369 (378)
|||+.+|+++|+++||++|++.++.... ..+ ..++++++++.++...
T Consensus 174 IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 174 VGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred eCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999999999999999999998887532 222 3589999999988543
No 8
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.95 E-value=5.3e-27 Score=215.00 Aligned_cols=208 Identities=20% Similarity=0.254 Sum_probs=154.4
Q ss_pred EEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHHH
Q 017067 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNV 166 (378)
Q Consensus 87 viFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~~ 166 (378)
||||+||||+|+... +..+++.+++++|++. ++...+...++ .....+...+....+.... ...++.+
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~------~~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP--ATLARVIGFIG---NGVPVLMERVLAWAGQEPD------AQRVAEL 68 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhc---ccHHHHHHHHhhccccccC------hHHHHHH
Confidence 699999999999886 7789999999999862 55555544432 2223333344443332211 1123444
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhh
Q 017067 167 LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246 (378)
Q Consensus 167 ~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~ 246 (378)
.+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+||+ ....++.+++++|+.++|+. +++.+++..
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~---- 139 (213)
T TIGR01449 69 RKLFDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSV-LIGGDSLAQ---- 139 (213)
T ss_pred HHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcE-EEecCCCCC----
Confidence 555555555544 335679999999999999999999999994 46889999999999999986 444443321
Q ss_pred ccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017067 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (378)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs 326 (378)
.||+|++ |..+++++|++|++|++|||+
T Consensus 140 --------------------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs 167 (213)
T TIGR01449 140 --------------------------------------RKPHPDP--------------LLLAAERLGVAPQQMVYVGDS 167 (213)
T ss_pred --------------------------------------CCCChHH--------------HHHHHHHcCCChhHeEEeCCC
Confidence 1666555 999999999999999999999
Q ss_pred HhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcch
Q 017067 327 QSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGAD 367 (378)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~ 367 (378)
.+|+++|+++||++|++.++......+. .++++++++.++.
T Consensus 168 ~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~ 210 (213)
T TIGR01449 168 RVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELP 210 (213)
T ss_pred HHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHH
Confidence 9999999999999999988766544443 5899999999874
No 9
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.95 E-value=6.5e-27 Score=216.73 Aligned_cols=211 Identities=18% Similarity=0.261 Sum_probs=154.6
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCCh-hHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
...+++|+||+||||+|+... +..++.+++.++|++ .+. ......+ +.........+....++... .
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~----~- 71 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVD---ISRREELPDTL---GLRIDQVVDLWYARQPWNGP----S- 71 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCC---CCHHHHHHHhh---CCCHHHHHHHHHHhcCCCCC----C-
Confidence 345899999999999999987 889999999999987 232 2222222 22223333344444444321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
.+...+...+.+.+.+ ....+++||+.++|+.|+++|++++|+||. .....+.+++.+++..+|+. +++.++
T Consensus 72 ---~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~ 143 (222)
T PRK10826 72 ---RQEVVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASAS---PLHMLEAVLTMFDLRDYFDA-LASAEK 143 (222)
T ss_pred ---HHHHHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHhCcchhcccE-EEEccc
Confidence 1122333333343333 234679999999999999999999999994 46888899999999999987 444433
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
+.. +||+|++ |+.+++++|++|++
T Consensus 144 ~~~------------------------------------------~Kp~~~~--------------~~~~~~~~~~~~~~ 167 (222)
T PRK10826 144 LPY------------------------------------------SKPHPEV--------------YLNCAAKLGVDPLT 167 (222)
T ss_pred CCC------------------------------------------CCCCHHH--------------HHHHHHHcCCCHHH
Confidence 321 2666555 99999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCC-CCCCCCcEEecCCCcch
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSR-AEFPSANAVMDGFGGAD 367 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~l~~ad~vi~~l~e~~ 367 (378)
|++|||+.+|+++|+++||++|++.++.... .....+++++.++.|+.
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 9999999999999999999999999886554 23446899999999973
No 10
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.95 E-value=4.4e-27 Score=216.52 Aligned_cols=210 Identities=10% Similarity=0.147 Sum_probs=153.8
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++++|+||+||||+|+... +..+|.+++++++... .+...+....+ ...... ...++ .+.
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~~--~~~~~~~~~~G---~~~~~~----~~~~~------~~~--- 61 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPNQ--YKREDVLPFIG---PSLHDT----FSKID------ESK--- 61 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhC---cCHHHH----HHhcC------HHH---
Confidence 45789999999999999987 8899999999988652 34444433332 221222 12221 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.+.+...+...+.+.. ....+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. +++.+++.
T Consensus 62 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~-i~~~~~~~ 135 (214)
T PRK13288 62 -VEEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDV-VITLDDVE 135 (214)
T ss_pred -HHHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeE-EEecCcCC
Confidence 2233333333333322 234679999999999999999999999994 46888999999999999987 45544332
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..++++++++|++|+
T Consensus 136 ~------------------------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 136 H------------------------------------------AKPDPEP--------------VLKALELLGAKPEEAL 159 (214)
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHcCCCHHHEE
Confidence 1 2666665 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISK 372 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~ 372 (378)
+|||+.+|+++|+++||++|++.++.....++ ..++++++++.++...+..
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 99999999999999999999999886554443 3589999999998765543
No 11
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.95 E-value=7.4e-27 Score=222.65 Aligned_cols=222 Identities=19% Similarity=0.161 Sum_probs=156.9
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHH----------HHHHHHHHcCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWP 151 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~ 151 (378)
+++++||||+||||+|+....+..+|++++.++|++ ++...+...+ +..... ....+...+|.+
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~---G~~~~~~~~~~~~~~~~~~~~~~~~g~~ 75 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVE---ITLEEARGPM---GLGKWDHIRALLKMPRVAARWQAVFGRL 75 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCC---CCHHHHHHhc---CCCHHHHHHHHHhcHHHHHHHHHHhCCC
Confidence 357999999999999996532468999999999986 4443332222 111111 111233344432
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc-
Q 017067 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS- 230 (378)
Q Consensus 152 ~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f- 230 (378)
. .. ..+..+.+.+...+.+.+ .....++||+.++|+.|+++|++++|+||+. ...+..+++.+++..+|
T Consensus 76 ~--~~----~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~---~~~~~~~l~~~~l~~~~~ 145 (267)
T PRK13478 76 P--TE----ADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYT---REMMDVVVPLAAAQGYRP 145 (267)
T ss_pred C--CH----HHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHHHhhcCCCc
Confidence 1 11 123344444555554444 3356799999999999999999999999954 57788899999988875
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+. +++.+++.. .||+|++ |..++
T Consensus 146 d~-i~~~~~~~~------------------------------------------~KP~p~~--------------~~~a~ 168 (267)
T PRK13478 146 DH-VVTTDDVPA------------------------------------------GRPYPWM--------------ALKNA 168 (267)
T ss_pred eE-EEcCCcCCC------------------------------------------CCCChHH--------------HHHHH
Confidence 54 455544321 2666666 99999
Q ss_pred HHcCCC-CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC-----------------------CCCC--CCCcEEecCCC
Q 017067 311 EYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS-----------------------RAEF--PSANAVMDGFG 364 (378)
Q Consensus 311 ~~lgv~-p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----------------------~~~l--~~ad~vi~~l~ 364 (378)
+++|+. |++|+||||+.+|+++|+++||++|+|.++... .+++ ..|+++++++.
T Consensus 169 ~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~ 248 (267)
T PRK13478 169 IELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIA 248 (267)
T ss_pred HHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHH
Confidence 999996 699999999999999999999999999988652 1233 35899999999
Q ss_pred cchHHHHHHhhc
Q 017067 365 GADLTISKLRHS 376 (378)
Q Consensus 365 e~~~~~~~l~~~ 376 (378)
++...+..+..+
T Consensus 249 ~l~~~l~~~~~~ 260 (267)
T PRK13478 249 DLPAVIADIEAR 260 (267)
T ss_pred HHHHHHHHHHHH
Confidence 998777666544
No 12
>PRK11587 putative phosphatase; Provisional
Probab=99.95 E-value=2.7e-26 Score=212.30 Aligned_cols=204 Identities=17% Similarity=0.253 Sum_probs=142.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++++|||||||||+|+... +..+|+++++++|++. ..+...+ .+.........+.. + ...++
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~-----~~~~~~~--~g~~~~~~~~~~~~--~----~~~~~--- 63 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP-----DEVLNFI--HGKQAITSLRHFMA--G----ASEAE--- 63 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH-----HHHHHHH--cCCCHHHHHHHHhc--c----CCcHH---
Confidence 46789999999999999987 8899999999999862 2222221 12222222222211 1 11111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
..+. .... ..+.... .....++||+.++|+.|+++|++++|+||+. .......++.+++. .|+. +++.+++.
T Consensus 64 ~~~~-~~~~-~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~---~~~~~~~l~~~~l~-~~~~-i~~~~~~~ 135 (218)
T PRK11587 64 IQAE-FTRL-EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGS---VPVASARHKAAGLP-APEV-FVTAERVK 135 (218)
T ss_pred HHHH-HHHH-HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCC---chHHHHHHHhcCCC-CccE-EEEHHHhc
Confidence 1111 1111 1122222 3457799999999999999999999999964 45667778888884 4543 45554432
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..+++++|++|++|+
T Consensus 136 ~------------------------------------------~KP~p~~--------------~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 136 R------------------------------------------GKPEPDA--------------YLLGAQLLGLAPQECV 159 (218)
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 1 2777666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
||||+.+|+++|+++||++|++.++.. ..+...++++++++.|+.
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~~~~~-~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVNAPAD-TPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEECCCCc-hhhhccCCEEecchhhee
Confidence 999999999999999999999987653 334556899999999985
No 13
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.94 E-value=2.3e-26 Score=227.82 Aligned_cols=210 Identities=19% Similarity=0.253 Sum_probs=156.1
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
..++|||||||||+|+....+..+|.++++++|++. .+...+..+. +......+..+.. +.. . ...
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~---G~~~~~~l~~ll~---~~~--~----~~~ 195 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVE---GMKNEQAISEVLC---WSR--D----PAE 195 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhc---CCCHHHHHHHHhh---ccC--C----HHH
Confidence 578999999999999886326679999999999872 2222222222 2223333333222 111 1 112
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
++.+.+.+.+.|.+.. .....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+. +++.+++..
T Consensus 196 ~e~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~---~~~~~~~~L~~lgL~~yFd~-Iv~sddv~~ 270 (381)
T PLN02575 196 LRRMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTR---PRKTLENAIGSIGIRGFFSV-IVAAEDVYR 270 (381)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCHHHceE-EEecCcCCC
Confidence 3455555666665555 345679999999999999999999999994 46899999999999999998 555544422
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++|+|
T Consensus 271 ------------------------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 271 ------------------------------------------GKPDPEM--------------FIYAAQLLNFIPERCIV 294 (381)
T ss_pred ------------------------------------------CCCCHHH--------------HHHHHHHcCCCcccEEE
Confidence 2777666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|||+..||++|+++||++|++.++. ...++..++++++++.|+..
T Consensus 295 IGDS~~DIeAAk~AGm~~IgV~~~~-~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 295 FGNSNQTVEAAHDARMKCVAVASKH-PIYELGAADLVVRRLDELSI 339 (381)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCC-ChhHhcCCCEEECCHHHHHH
Confidence 9999999999999999999998764 33445669999999999854
No 14
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.94 E-value=4.1e-26 Score=211.80 Aligned_cols=214 Identities=23% Similarity=0.297 Sum_probs=153.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+++|+||+||||+|+... +..+++.+++++|++. .+......+++. ....+ +....+.... +....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~---~~~~~---~~~~~~~~~~---~~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGL---GLDEL---IERLLGEADE---EAAAE 69 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcC---CHHHH---HHHHhccccc---hhHHH
Confidence 46889999999999999986 8899999999999983 444444444322 22222 2222222111 00001
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.++.+...+.+.+.+.. ...++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+. +++.++..
T Consensus 70 ~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k---~~~~~~~~l~~~gl~~~F~~-i~g~~~~~ 142 (220)
T COG0546 70 LVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNK---PERELDILLKALGLADYFDV-IVGGDDVP 142 (220)
T ss_pred HHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHhCCccccce-EEcCCCCC
Confidence 22333333333333322 2569999999999999999999999994 57999999999999999998 34422221
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|.. +..+++++|++|++++
T Consensus 143 ~------------------------------------------~KP~P~~--------------l~~~~~~~~~~~~~~l 166 (220)
T COG0546 143 P------------------------------------------PKPDPEP--------------LLLLLEKLGLDPEEAL 166 (220)
T ss_pred C------------------------------------------CCcCHHH--------------HHHHHHHhCCChhheE
Confidence 1 1555444 8999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTI 370 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~ 370 (378)
||||+.+|+++|++||+++|+|.+++.....+ ..+|++++++.|+...+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 99999999999999999999999998533333 34899999999986543
No 15
>PLN02940 riboflavin kinase
Probab=99.94 E-value=1.2e-25 Score=224.99 Aligned_cols=208 Identities=20% Similarity=0.293 Sum_probs=159.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
..+++|+||+||||+|+... +..+|+.+++++|++ ++...+..+++ .........++..++.+..
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~-------- 73 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVG---KTPLEAAATVVEDYGLPCS-------- 73 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHHHhCCCCC--------
Confidence 45899999999999999997 889999999999986 56555443332 2333444556666665422
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHH-HhCccccchheeechhhH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEV 240 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~-~lgi~~~f~~~iv~~~~~ 240 (378)
.+.+.+...+.+.+.. ....++||+.++|+.|+++|++++|+||+. ...+...++ .+|+.++|+. +++.+++
T Consensus 74 -~~~~~~~~~~~~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~Fd~-ii~~d~v 146 (382)
T PLN02940 74 -TDEFNSEITPLLSEQW--CNIKALPGANRLIKHLKSHGVPMALASNSP---RANIEAKISCHQGWKESFSV-IVGGDEV 146 (382)
T ss_pred -HHHHHHHHHHHHHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHhccChHhhCCE-EEehhhc
Confidence 1233334444444433 246789999999999999999999999954 567777776 7899999998 4555444
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.. .||+|++ |..+++++|++|++|
T Consensus 147 ~~------------------------------------------~KP~p~~--------------~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 147 EK------------------------------------------GKPSPDI--------------FLEAAKRLNVEPSNC 170 (382)
T ss_pred CC------------------------------------------CCCCHHH--------------HHHHHHHcCCChhHE
Confidence 22 2777666 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++|||+.+|+++|+++||++|++.++.........++.+++++.|+.
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcC
Confidence 99999999999999999999999987655555667899999999875
No 16
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.94 E-value=5.4e-26 Score=210.13 Aligned_cols=213 Identities=14% Similarity=0.225 Sum_probs=152.6
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChh-HHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
++++|+||+||||+|+... +..+|.+++.++|++ .+.+ .+....+ .....+...+..+++.+...
T Consensus 3 ~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~------- 68 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGIT---LSLEEVFKRFKG---VKLYEIIDIISKEHGVTLAK------- 68 (221)
T ss_pred CCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcC---CCHHHHHHHHHHHhCCCCCH-------
Confidence 5889999999999999886 789999999999986 3322 2322221 12344555666666654321
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
+.+...+.+.+...+ .....++||+.++|+.| +++++|+||+ ....++..++.+|+.++|+..+++++++.
T Consensus 69 --~~~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~F~~~v~~~~~~~ 139 (221)
T PRK10563 69 --AELEPVYRAEVARLF-DSELEPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHYFPDKLFSGYDIQ 139 (221)
T ss_pred --HHHHHHHHHHHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHhCcceEeeHHhcC
Confidence 122223333333332 23577999999999999 4999999994 45788899999999999964456665442
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..+++++|++|++|+
T Consensus 140 ~------------------------------------------~KP~p~~--------------~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 140 R------------------------------------------WKPDPAL--------------MFHAAEAMNVNVENCI 163 (221)
T ss_pred C------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeE
Confidence 2 2666666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC-CCcEEecCCCcchHHHHHHhhccC
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP-SANAVMDGFGGADLTISKLRHSQW 378 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~-~ad~vi~~l~e~~~~~~~l~~~~~ 378 (378)
||||+..||++|+++||++|++..+... ..+. .++.+++++.|+.. .+.+|+|
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~---~~~~~~~ 217 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYFCADPHN-KPIDHPLVTTFTDLAQLPE---LWKARGW 217 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEECCCCCC-cchhhhhhHHHHHHHHHHH---HHHHhcc
Confidence 9999999999999999999998654332 2233 34667888888753 5667766
No 17
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=3.7e-25 Score=204.39 Aligned_cols=216 Identities=19% Similarity=0.224 Sum_probs=157.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+++++|+||+||||+|+... +..++..++.++|.+. ++...+....+ .....+........+ ..++.+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~--~~~~~~---- 71 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPP--AGEERVRTWVG---NGADVLVERALTWAG--REPDEE---- 71 (226)
T ss_pred CcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhC---ccHHHHHHHHHhhcc--CCccHH----
Confidence 56889999999999999876 7789999999999873 44444433332 122233323222222 112212
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.++...+.+...|.+.. .....++||+.++|+.|+++|++++++||. .....+.+++.+|+..+|+. +++.+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~ 146 (226)
T PRK13222 72 LLEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIADYFSV-VIGGDSLP 146 (226)
T ss_pred HHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCccCccE-EEcCCCCC
Confidence 23445555555665544 234679999999999999999999999994 46788899999999988876 44443321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.++++++++|++|+
T Consensus 147 ~------------------------------------------~kp~~~~--------------~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 147 N------------------------------------------KKPDPAP--------------LLLACEKLGLDPEEML 170 (226)
T ss_pred C------------------------------------------CCcChHH--------------HHHHHHHcCCChhheE
Confidence 1 2666555 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTI 370 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~ 370 (378)
+|||+.+|+++|+++|+++|++.++.....+. ..++++++++.++...+
T Consensus 171 ~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred EECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 99999999999999999999999886543333 35899999999987654
No 18
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=1.1e-25 Score=215.55 Aligned_cols=212 Identities=16% Similarity=0.234 Sum_probs=157.9
Q ss_pred CCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 80 ~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
.+..+++|+|||||||+|++.. +..+++++++++|++. ++.+.+..+.+. ... .+.++++++ .++
T Consensus 58 ~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~--~~~~~~~~~~g~---~~~----~i~~~~~~~----~~~- 122 (273)
T PRK13225 58 YPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDP--IDERDYAQLRQW---SSR----TIVRRAGLS----PWQ- 122 (273)
T ss_pred hhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCc---cHH----HHHHHcCCC----HHH-
Confidence 3456899999999999999986 7899999999999863 555555555432 122 223334432 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
.+.+.+.+.+.+.+.+ ..++++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. +++.++
T Consensus 123 ---~~~~~~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~~~F~~-vi~~~~ 193 (273)
T PRK13225 123 ---QARLLQRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLRSLFSV-VQAGTP 193 (273)
T ss_pred ---HHHHHHHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhheEE-EEecCC
Confidence 2233334444443332 34678999999999999999999999995 46889999999999999986 333322
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
+ + + + +.. |..++++++++|++
T Consensus 194 ~---------------------------------------------~-------~--k--~~~---~~~~l~~~~~~p~~ 214 (273)
T PRK13225 194 I---------------------------------------------L-------S--K--RRA---LSQLVAREGWQPAA 214 (273)
T ss_pred C---------------------------------------------C-------C--C--HHH---HHHHHHHhCcChhH
Confidence 1 0 0 1 112 88999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHHHHHh
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~~~l~ 374 (378)
|+||||+.+|+++|+++||.+|++.++.....++. .++++++++.++...+..|+
T Consensus 215 ~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~ 271 (273)
T PRK13225 215 VMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLM 271 (273)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999998877665443 58999999999987777665
No 19
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.93 E-value=8.5e-25 Score=201.65 Aligned_cols=208 Identities=17% Similarity=0.160 Sum_probs=137.9
Q ss_pred ccEEEEecccccccccccchHHHHHHH---HHHcCCCCCCCChhHHHHHHhh----ccCChHHHHHHHHHHcCCCCCCCc
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLRK----SAGDEDRMLVLFFNRIGWPTSVPT 156 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~---~~~~gl~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~g~~~~l~~ 156 (378)
+++|+||+||||+|+... +..++..+ +.++|++ ++...+...+.. .+.........+...++... .
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 74 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLN---VDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEY--N- 74 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCc---CCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhc--C-
Confidence 689999999999999986 55665544 4567776 343333222211 11000000111111111100 0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeec
Q 017067 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (378)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~ 236 (378)
.+...+.... +.... ...++++||+.++|+.|+++|++++|+||+ ........++.+|+..+|+. +++
T Consensus 75 ------~~~~~~~~~~-~~~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~f~~-i~~ 142 (221)
T TIGR02253 75 ------PKLVAAFVYA-YHKLK-FAYLRVYPGVRDTLMELRESGYRLGIITDG---LPVKQWEKLERLGVRDFFDA-VIT 142 (221)
T ss_pred ------HHHHHHHHHH-HHHHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHhCChHHhccE-EEE
Confidence 0011111111 11211 223679999999999999999999999994 45778889999999999987 444
Q ss_pred hhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC
Q 017067 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (378)
Q Consensus 237 ~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~ 316 (378)
.+++.. .||+|++ |..+++++|++
T Consensus 143 ~~~~~~------------------------------------------~KP~~~~--------------~~~~~~~~~~~ 166 (221)
T TIGR02253 143 SEEEGV------------------------------------------EKPHPKI--------------FYAALKRLGVK 166 (221)
T ss_pred eccCCC------------------------------------------CCCCHHH--------------HHHHHHHcCCC
Confidence 444321 2666666 99999999999
Q ss_pred CCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCC---CCCCCCcEEecCCCcc
Q 017067 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSR---AEFPSANAVMDGFGGA 366 (378)
Q Consensus 317 p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~---~~l~~ad~vi~~l~e~ 366 (378)
|++|++|||+. +|+.+|+++||++|++.++.... .....++++++++.|+
T Consensus 167 ~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 99999999998 89999999999999999876543 2234578999998775
No 20
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.93 E-value=3.9e-25 Score=202.24 Aligned_cols=198 Identities=21% Similarity=0.330 Sum_probs=145.6
Q ss_pred EEEecccccccccccchHHHHHHHHHH-cCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 87 viFDlDGTLid~~~~~~~~a~~~~~~~-~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
||||+||||+|+... +..++++++.+ +|.+. ++.+.+...++. .... +.+.++.+. .. .+.
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~---~~~~----~~~~~~~~~----~~----~~~ 62 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDGP--APFEEYRRHLGR---YFPD----IMRIMGLPL----EM----EEP 62 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCCC--CCHHHHHHHhCc---cHHH----HHHHcCCCH----HH----HHH
Confidence 699999999999997 88999999988 47652 444444444321 1122 223344321 00 111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh
Q 017067 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~ 245 (378)
.. ...+ . + ....+++||+.++|+.|+++|++++|+||. ....++..++.+|+.++|+. +++.++..
T Consensus 63 ~~---~~~~-~-~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~~l~~~f~~-i~~~~~~~---- 128 (205)
T TIGR01454 63 FV---RESY-R-L-AGEVEVFPGVPELLAELRADGVGTAIATGK---SGPRARSLLEALGLLPLFDH-VIGSDEVP---- 128 (205)
T ss_pred HH---HHHH-H-h-hcccccCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHcCChhheee-EEecCcCC----
Confidence 11 1111 1 1 235789999999999999999999999995 45788899999999999987 44443321
Q ss_pred hccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017067 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGD 325 (378)
..||+|++ |+.+++++|++|++|+||||
T Consensus 129 --------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD 156 (205)
T TIGR01454 129 --------------------------------------RPKPAPDI--------------VREALRLLDVPPEDAVMVGD 156 (205)
T ss_pred --------------------------------------CCCCChHH--------------HHHHHHHcCCChhheEEEcC
Confidence 12666665 99999999999999999999
Q ss_pred CHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 326 SQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+.+|+++|+++||++|++.++.....++. .++++++++.++..
T Consensus 157 ~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 157 AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 99999999999999999998887665554 48999999988754
No 21
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=8.1e-25 Score=209.55 Aligned_cols=215 Identities=17% Similarity=0.190 Sum_probs=152.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
..+++|||||||||+|+... +..+++.++.++|.+. .+...+....+ .....+...+.........++. .
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~l~~~~~~~~~~~----~ 80 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVG---NGAPVLVRRALAGSIDHDGVDD----E 80 (272)
T ss_pred ccCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhC---hhHHHHHHHHhcccccccCCCH----H
Confidence 34679999999999999997 8899999999999873 33333333332 1122222222111100111111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
..+.+.+.+.+.|... ....+++||+.++|+.|+++|++++|+||+ ....++.+++.+++..+|+. +++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~f~~-i~~~d~~~ 154 (272)
T PRK13223 81 LAEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRYFRW-IIGGDTLP 154 (272)
T ss_pred HHHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhhCeE-EEecCCCC
Confidence 2334444444444432 123568999999999999999999999994 45788889999999999886 45543321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.+++++|++|++|+
T Consensus 155 ~------------------------------------------~Kp~p~~--------------~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 155 Q------------------------------------------KKPDPAA--------------LLFVMKMAGVPPSQSL 178 (272)
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHhCCChhHEE
Confidence 1 1666555 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+|||+.+||++|+++||++++|.++.....++. .++++++++.++..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 999999999999999999999998876554443 58999999999853
No 22
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.93 E-value=7.1e-25 Score=196.37 Aligned_cols=184 Identities=24% Similarity=0.338 Sum_probs=134.5
Q ss_pred EEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
+|+||+||||+|+... +..+|+++++++|++ ++......+.+ .........+..+.+.+. +.++ +..
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~--~~~~----~~~ 67 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKG---VSREDSLERILDLGGKKY--SEEE----KEE 67 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CChHHHHHHHHHhcCCCC--CHHH----HHH
Confidence 5899999999999997 889999999999987 45443333322 223444555666665532 2122 233
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh
Q 017067 166 VLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~ 244 (378)
+.+...+.|.+.+.. ....++||+.++|+.|+++|++++|+||+. ....+++.+|+..+|+. +++++++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~-----~~~~~l~~~~l~~~f~~-~~~~~~~~~-- 139 (185)
T TIGR01990 68 LAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASK-----NAPTVLEKLGLIDYFDA-IVDPAEIKK-- 139 (185)
T ss_pred HHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc-----cHHHHHHhcCcHhhCcE-EEehhhcCC--
Confidence 334444444444321 234689999999999999999999999942 24578999999999987 444444321
Q ss_pred hhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017067 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (378)
Q Consensus 245 ~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VG 324 (378)
.||+|++ |+.++++++++|++|++||
T Consensus 140 ----------------------------------------~kp~p~~--------------~~~~~~~~~~~~~~~v~vg 165 (185)
T TIGR01990 140 ----------------------------------------GKPDPEI--------------FLAAAEGLGVSPSECIGIE 165 (185)
T ss_pred ----------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEe
Confidence 2666666 9999999999999999999
Q ss_pred CCHhHHHHHHHcCCCEEEEc
Q 017067 325 GSQSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~ 344 (378)
|+.+|+++|+++||++|+|.
T Consensus 166 D~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 166 DAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred cCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999874
No 23
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.93 E-value=1.5e-24 Score=194.33 Aligned_cols=185 Identities=23% Similarity=0.352 Sum_probs=135.6
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+++|+||+||||+|+... +..+|..+++++|++ ++.. +...+ .+.........+....+. .++.++ +
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~-~~~~~--~g~~~~~~~~~~~~~~~~--~~~~~~----~ 67 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQ-YNTSL--GGLSREDILRAILKLRKP--GLSLET----I 67 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHH-HHHHc--CCCCHHHHHHHHHHhcCC--CCCHHH----H
Confidence 478999999999999986 889999999999987 4432 22211 122233344445554431 122122 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~ 243 (378)
..+.+.+.+.|.+.+......++||+.++|+.|+++|++++++||+ ..++.+++.+|+.++|+. +++.++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~-v~~~~~~~~- 140 (185)
T TIGR02009 68 HQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDA-IVDADEVKE- 140 (185)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCE-eeehhhCCC-
Confidence 3444455555555553345789999999999999999999999993 557889999999999987 444433211
Q ss_pred hhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017067 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (378)
Q Consensus 244 ~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~V 323 (378)
.||+|++ |..+++++|++|++|++|
T Consensus 141 -----------------------------------------~kp~~~~--------------~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 141 -----------------------------------------GKPHPET--------------FLLAAELLGVSPNECVVF 165 (185)
T ss_pred -----------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEE
Confidence 2666665 999999999999999999
Q ss_pred eCCHhHHHHHHHcCCCEEEE
Q 017067 324 AGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v 343 (378)
||+.+|+++|+++||++|+|
T Consensus 166 gD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 166 EDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999875
No 24
>PRK09449 dUMP phosphatase; Provisional
Probab=99.92 E-value=3.8e-24 Score=198.07 Aligned_cols=210 Identities=14% Similarity=0.175 Sum_probs=137.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH-
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK- 160 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~- 160 (378)
|++++|+||+||||+|... ..++.++++++|++ ++...+..+... + . .....+ . .+ .+...+..
T Consensus 1 m~~k~iiFDlDGTLid~~~---~~~~~~~~~~~g~~---~~~~~~~~~~~~--~-~-~~~~~~-~-~~---~~~~~~~~~ 65 (224)
T PRK09449 1 MKYDWILFDADETLFHFDA---FAGLQRMFSRYGVD---FTAEDFQDYQAV--N-K-PLWVDY-Q-NG---AITALQLQH 65 (224)
T ss_pred CCccEEEEcCCCchhcchh---hHHHHHHHHHhCCC---CcHHHHHHHHHH--H-H-HHHHHH-H-cC---CCCHHHHHH
Confidence 3589999999999998543 47888999999986 344434333111 0 0 010000 0 00 00000000
Q ss_pred HHHHHH-------HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhe
Q 017067 161 AFVKNV-------LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (378)
Q Consensus 161 ~~i~~~-------~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~ 233 (378)
...+.+ .+...+.|.+.+ .....++||+.++|+.|+ +|++++|+||+ .....+..++.+|+..+|+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v 140 (224)
T PRK09449 66 TRFESWAEKLNVTPGELNSAFLNAM-AEICTPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDYFDLL 140 (224)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH-hhcCccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHHcCEE
Confidence 000000 011223333333 223679999999999999 57999999994 467888899999999999884
Q ss_pred eechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc
Q 017067 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (378)
Q Consensus 234 iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l 313 (378)
++++++.. .||+|++ |..+++++
T Consensus 141 -~~~~~~~~------------------------------------------~KP~p~~--------------~~~~~~~~ 163 (224)
T PRK09449 141 -VISEQVGV------------------------------------------AKPDVAI--------------FDYALEQM 163 (224)
T ss_pred -EEECccCC------------------------------------------CCCCHHH--------------HHHHHHHc
Confidence 44433321 2777766 99999999
Q ss_pred CCC-CCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 314 EKP-VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 314 gv~-p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|+. +++|+||||+. +|+++|+++||++|++..+......-..++++++++.++..
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQ 220 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHH
Confidence 985 58999999998 69999999999999997542221122257999999988754
No 25
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=2.3e-24 Score=193.92 Aligned_cols=183 Identities=19% Similarity=0.277 Sum_probs=134.3
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++++|+||+||||+|+... +..+|.+++.++|++ ++...... ..+.....+...+....+.. ..
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~---~~g~~~~~~~~~~~~~~~~~--~~------- 67 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVA---LNGSPTWRIAQAIIELNQAD--LD------- 67 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHH---hcCCCHHHHHHHHHHHhCCC--CC-------
Confidence 4789999999999999987 889999999999986 44332222 22222333444455544422 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
.+.+...+...+.+.+ ....+++|+ .++|..|+++ ++++|+||+ ....++.+++.+|+..+|+. +++.+++..
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~---~~~~~~~~l~~~~l~~~fd~-i~~~~~~~~ 140 (188)
T PRK10725 68 PHALAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTGS---ESAIAEALLAHLGLRRYFDA-VVAADDVQH 140 (188)
T ss_pred HHHHHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcCC---chHHHHHHHHhCCcHhHceE-EEehhhccC
Confidence 1122333334444443 344567886 5899999876 899999994 46888999999999999997 566555422
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++||+
T Consensus 141 ------------------------------------------~KP~p~~--------------~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 141 ------------------------------------------HKPAPDT--------------FLRCAQLMGVQPTQCVV 164 (188)
T ss_pred ------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEE
Confidence 2777666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEc
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~ 344 (378)
|||+.+|+++|+++||++|.+.
T Consensus 165 igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred EeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999986
No 26
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.92 E-value=3.1e-24 Score=197.72 Aligned_cols=206 Identities=14% Similarity=0.173 Sum_probs=143.3
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhc---------cCC-hHHH----HHHHHHHcC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGD-EDRM----LVLFFNRIG 149 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~---------~g~-~~~~----~~~~~~~~g 149 (378)
+++|+||+||||+|+... +..++.++++++|++ .+...+..+.... ++. .... +..+.++++
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIP---LTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCC---ccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 579999999999999986 778899999999986 2323222221110 000 0000 111122222
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 150 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
.+.. .+...+.|.+.. .....++||+.++|+.|+++ ++++|+||+ ....+..+++.+|+..+
T Consensus 77 ~~~~-------------~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~ 138 (224)
T TIGR02254 77 TEAD-------------EALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPF 138 (224)
T ss_pred CCCc-------------HHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhh
Confidence 1100 011233333333 23467999999999999999 999999994 46888899999999999
Q ss_pred chheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHH
Q 017067 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (378)
Q Consensus 230 f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a 309 (378)
|+. +++++++. ..||+|++ |..+
T Consensus 139 fd~-i~~~~~~~------------------------------------------~~KP~~~~--------------~~~~ 161 (224)
T TIGR02254 139 FDD-IFVSEDAG------------------------------------------IQKPDKEI--------------FNYA 161 (224)
T ss_pred cCE-EEEcCccC------------------------------------------CCCCCHHH--------------HHHH
Confidence 987 44443321 12777766 9999
Q ss_pred HHHc-CCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 310 AEYA-EKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 310 ~~~l-gv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
++++ |++|++|+||||+. +|+++|+++||++|++..+.........++++++++.|+..
T Consensus 162 ~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 162 LERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 9999 99999999999998 79999999999999998764443333457899999988743
No 27
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.92 E-value=3.9e-24 Score=219.00 Aligned_cols=216 Identities=12% Similarity=0.138 Sum_probs=152.8
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCC--CCCC-ChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD--CANW-TAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~--~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
.+.+++|||||||||+|+... +..+|++++++++.. +..+ +...+...+ +.........+....+.+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---G~~~~~~~~~l~~~~~~~------ 307 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIM---GVPLPKVWEALLPDHSLE------ 307 (459)
T ss_pred HHhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHc---CCChHHHHHHHhhhcchh------
Confidence 345799999999999999997 889999999998421 0011 223333332 222333333333322211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
..+.....+.+.+...+.....+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. +++.
T Consensus 308 ----~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~---~~~~~~~~l~~~~l~~~f~~-i~~~ 379 (459)
T PRK06698 308 ----IREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNG---LTEYLRAIVSYYDLDQWVTE-TFSI 379 (459)
T ss_pred ----HHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHCCcHhhcce-eEec
Confidence 112223333344444443445789999999999999999999999994 46889999999999999988 4454
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. ||.|++ |..++++++ |
T Consensus 380 d~v~~-------------------------------------------~~kP~~--------------~~~al~~l~--~ 400 (459)
T PRK06698 380 EQINS-------------------------------------------LNKSDL--------------VKSILNKYD--I 400 (459)
T ss_pred CCCCC-------------------------------------------CCCcHH--------------HHHHHHhcC--c
Confidence 43311 333333 888888875 7
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
++|++|||+.+|+++|+++||.+|++.++.....++..+|++++++.++...+...
T Consensus 401 ~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 401 KEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred ceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999988766566777999999999987655443
No 28
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.92 E-value=1.8e-23 Score=231.96 Aligned_cols=219 Identities=21% Similarity=0.289 Sum_probs=159.5
Q ss_pred CCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 80 ~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
.-+++++|+|||||||+|+... +..+|.++++++|++ ++.+.+..++. .....+...+....+++....
T Consensus 71 ~~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G---~~~~~~~~~~~~~~~l~~~~~---- 139 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMG---TGEANFLGGVASVKGVKGFDP---- 139 (1057)
T ss_pred cCCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---CCHHHHHHHHHHhcCCCCCCH----
Confidence 3457899999999999999997 889999999999987 56555544442 233444444444444432111
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc-ccchheeech
Q 017067 160 KAFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGN 237 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~-~~f~~~iv~~ 237 (378)
+...+.+.+.|.+.+.. ....++||+.++|+.|+++|++++|+||+ ....++..++.+|+. .+|+. +++.
T Consensus 140 ----~~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~---~~~~~~~~L~~~gl~~~~Fd~-iv~~ 211 (1057)
T PLN02919 140 ----DAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSA---DRIKVDANLAAAGLPLSMFDA-IVSA 211 (1057)
T ss_pred ----HHHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHcCCChhHCCE-EEEC
Confidence 11222223333332211 12347999999999999999999999995 457888899999996 78887 4555
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |..+++++|++|
T Consensus 212 ~~~~~------------------------------------------~KP~Pe~--------------~~~a~~~lgv~p 235 (1057)
T PLN02919 212 DAFEN------------------------------------------LKPAPDI--------------FLAAAKILGVPT 235 (1057)
T ss_pred ccccc------------------------------------------CCCCHHH--------------HHHHHHHcCcCc
Confidence 44322 2777776 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHHHhhc
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISKLRHS 376 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~l~~~ 376 (378)
++|++|||+.+|+++|+++||++|++.++... .++ ..++++++++.++ .+..++.+
T Consensus 236 ~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~~L~~~~a~~vi~~l~el--~~~~~~~~ 293 (1057)
T PLN02919 236 SECVVIEDALAGVQAARAAGMRCIAVTTTLSE-EILKDAGPSLIRKDIGNI--SLSDILTG 293 (1057)
T ss_pred ccEEEEcCCHHHHHHHHHcCCEEEEECCCCCH-HHHhhCCCCEEECChHHC--CHHHHHhc
Confidence 99999999999999999999999999988543 444 3579999999998 45555544
No 29
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.91 E-value=1.2e-23 Score=195.96 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=104.4
Q ss_pred CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 181 ~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+. +++++++..
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~-iv~s~~~~~------------------ 147 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDL-LLSTHTFGY------------------ 147 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCE-EEEeeeCCC------------------
Confidence 34679999999999999999999999994 45788888999999999987 444444321
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC-
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP- 339 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~- 339 (378)
.||+|++ |..+++++|++|++|+||||+.+|+++|+++||+
T Consensus 148 ------------------------~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 148 ------------------------PKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred ------------------------CCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 2666666 9999999999999999999999999999999998
Q ss_pred EEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 340 CVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 340 ~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
++.|.++.+...+ .+..+.+++.++...+..|.
T Consensus 190 ~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 190 CLGVTNPDSGIAE--KQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred EEEEeCCCCCccc--hhccCCCcHHHHHHHhhhhc
Confidence 5678877554332 34555667777665565553
No 30
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.91 E-value=3.1e-23 Score=189.12 Aligned_cols=183 Identities=17% Similarity=0.232 Sum_probs=124.6
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHH----Hhh----------ccCCh-H----HHHHHHH
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL----LRK----------SAGDE-D----RMLVLFF 145 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~----~~~----------~~g~~-~----~~~~~~~ 145 (378)
++|+||+||||+|+... +..+++++++++|++ ++...+... ... ..|.. . .+....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVE---VSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999886 789999999999997 333222211 110 00212 1 1122223
Q ss_pred HHcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC
Q 017067 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (378)
Q Consensus 146 ~~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg 225 (378)
...+.+. .+ .+.+.....+..+.......++||+.++|+.|+++|++++|+||+. . ..+..++.+|
T Consensus 77 ~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~-~~~~~l~~~~ 142 (203)
T TIGR02252 77 GRAGVPD---PE-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFD---S-RLRGLLEALG 142 (203)
T ss_pred HhcCCCC---ch-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCc---h-hHHHHHHHCC
Confidence 3333211 01 1122222222222212245789999999999999999999999954 2 3577899999
Q ss_pred ccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHH
Q 017067 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (378)
Q Consensus 226 i~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a 305 (378)
+..+|+. +++++++. ..||+|++
T Consensus 143 l~~~fd~-i~~s~~~~------------------------------------------~~KP~~~~-------------- 165 (203)
T TIGR02252 143 LLEYFDF-VVTSYEVG------------------------------------------AEKPDPKI-------------- 165 (203)
T ss_pred cHHhcce-EEeecccC------------------------------------------CCCCCHHH--------------
Confidence 9999987 44443321 12777666
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~ 342 (378)
|..+++++|++|++|++|||+. +||++|+++||++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999997 899999999999885
No 31
>PLN02811 hydrolase
Probab=99.90 E-value=3.4e-23 Score=191.91 Aligned_cols=202 Identities=20% Similarity=0.306 Sum_probs=143.3
Q ss_pred cccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHH
Q 017067 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEK 170 (378)
Q Consensus 91 lDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~~~~~~ 170 (378)
|||||+|+... +..+|.++++++|++ ++.+.+..++ +.....+...+...++++.....+ .+.+..
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 66 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMM---GKKAIEAARIFVEESGLSDSLSPE-------DFLVER 66 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHcc---CCCHHHHHHHHHHHhCCCCCCCHH-------HHHHHH
Confidence 79999999997 899999999999986 4444333333 223344555666666655322111 122222
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechh--hHHHhhhhcc
Q 017067 171 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE--EVERSLYGQF 248 (378)
Q Consensus 171 ~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~--~~~~~~~~~~ 248 (378)
...+.+.. ...+++||+.++|+.|+++|++++|+||+.+ ........+..++.++|+. +++.+ ++..
T Consensus 67 ~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~--~~~~~~~~~~~~l~~~f~~-i~~~~~~~~~~------ 135 (220)
T PLN02811 67 EAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSHK--RHFDLKTQRHGELFSLMHH-VVTGDDPEVKQ------ 135 (220)
T ss_pred HHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCch--hhHHHHHcccHHHHhhCCE-EEECChhhccC------
Confidence 22222222 2367899999999999999999999999642 2233334444577788876 44444 3211
Q ss_pred ccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC---CCCCcEEEEeC
Q 017067 249 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAG 325 (378)
Q Consensus 249 v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg---v~p~~~i~VGD 325 (378)
.||+|++ |..+++++| ++|++|+||||
T Consensus 136 ------------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgD 165 (220)
T PLN02811 136 ------------------------------------GKPAPDI--------------FLAAARRFEDGPVDPGKVLVFED 165 (220)
T ss_pred ------------------------------------CCCCcHH--------------HHHHHHHhCCCCCCccceEEEec
Confidence 2777777 999999997 99999999999
Q ss_pred CHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 326 SQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+.+|+++|+++||++|++.++......+..+|++++++.++.
T Consensus 166 s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 166 APSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred cHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 999999999999999999887655445667899999999875
No 32
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.90 E-value=2.1e-23 Score=189.62 Aligned_cols=105 Identities=16% Similarity=0.252 Sum_probs=91.6
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+.++|+. +++++++..
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~-i~~s~~~~~-------------------- 146 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDA-VLSADAVRA-------------------- 146 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhhe-eEehhhcCC--------------------
Confidence 568999999999999999999999994 46888899999999999987 555544422
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+.+|+++|+++||++|+
T Consensus 147 ----------------------~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~ 190 (198)
T TIGR01428 147 ----------------------YKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAW 190 (198)
T ss_pred ----------------------CCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEE
Confidence 2777666 9999999999999999999999999999999999999
Q ss_pred EcCCC
Q 017067 343 MRSSL 347 (378)
Q Consensus 343 v~~~~ 347 (378)
+..+.
T Consensus 191 v~r~~ 195 (198)
T TIGR01428 191 VNRPG 195 (198)
T ss_pred ecCCC
Confidence 98753
No 33
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.89 E-value=2.1e-22 Score=189.08 Aligned_cols=211 Identities=14% Similarity=0.092 Sum_probs=137.0
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCC---CCCCChhHHHHHHhhccC-----------ChHHHHHHHHH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLRKSAG-----------DEDRMLVLFFN 146 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~---~~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~ 146 (378)
..++++|+||+||||+|+... +..+++++++.++.. ...|+...+..+...... .....+..+.+
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 85 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAML 85 (238)
T ss_pred CCCceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHH
Confidence 345789999999999999886 778888777655211 112433333332221100 00112233444
Q ss_pred HcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 147 ~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
++|.+. ++ .+...+.....+.... ....++||+.++|+.|+++ ++++|+||++ .. ++.+|+
T Consensus 86 ~~g~~~----~~----~~~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~---~~-----~~~~gl 146 (238)
T PRK10748 86 DAGLSA----EE----ASAGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGN---AQ-----PELFGL 146 (238)
T ss_pred HcCCCH----HH----HHHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCC---ch-----HHHCCc
Confidence 555431 11 0111122222232221 2367999999999999976 9999999954 22 478899
Q ss_pred cccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHH
Q 017067 227 ERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306 (378)
Q Consensus 227 ~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~ 306 (378)
.++|+. ++++++... .||+|++ |
T Consensus 147 ~~~fd~-i~~~~~~~~------------------------------------------~KP~p~~--------------~ 169 (238)
T PRK10748 147 GDYFEF-VLRAGPHGR------------------------------------------SKPFSDM--------------Y 169 (238)
T ss_pred HHhhce-eEecccCCc------------------------------------------CCCcHHH--------------H
Confidence 999987 444444322 2666666 9
Q ss_pred HHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCC-CC---CCCCcEEecCCCcchH
Q 017067 307 RAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSR-AE---FPSANAVMDGFGGADL 368 (378)
Q Consensus 307 ~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~-~~---l~~ad~vi~~l~e~~~ 368 (378)
..+++++|++|++|+||||+ .+||.+|+++||++|++..+.... .. -..++.++.+|.|+..
T Consensus 170 ~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 170 HLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred HHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 99999999999999999999 599999999999999998764331 11 1237889999988754
No 34
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.89 E-value=9.7e-22 Score=181.65 Aligned_cols=209 Identities=21% Similarity=0.300 Sum_probs=154.4
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
..+.+++||+||||+||+.. +..+++..+.++|.+ ++.......+ +....++.+.+...+..+.+ .
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~m---G~~~~eaa~~~~~~~~dp~s--~----- 73 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSM---GKRTSEAARLFVKKLPDPVS--R----- 73 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHc---CCCHHHHHHHHHhhcCCCCC--H-----
Confidence 34668999999999999998 889999999999986 5555444433 33456677777655544433 2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC-ccccchheeech-hh
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGN-EE 239 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg-i~~~f~~~iv~~-~~ 239 (378)
+++..+..+...+++ ....+.||+.++++.|+.+|++++++|++++ ......+..++ +...|...+++. .+
T Consensus 74 --ee~~~e~~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~~---~~~~~k~~~~~~~~~~f~~~v~~d~~~ 146 (222)
T KOG2914|consen 74 --EEFNKEEEEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSSTS---ASFELKISRHEDIFKNFSHVVLGDDPE 146 (222)
T ss_pred --HHHHHHHHHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCCc---ccHHHHHHHhhHHHHhcCCCeecCCcc
Confidence 233344444444443 2466899999999999999999999999653 55556666665 777777655422 12
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC-C
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-R 318 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p-~ 318 (378)
+.+ .||+||+ |..|++++|..| +
T Consensus 147 v~~------------------------------------------gKP~Pdi--------------~l~A~~~l~~~~~~ 170 (222)
T KOG2914|consen 147 VKN------------------------------------------GKPDPDI--------------YLKAAKRLGVPPPS 170 (222)
T ss_pred ccC------------------------------------------CCCCchH--------------HHHHHHhcCCCCcc
Confidence 221 2777777 999999999998 9
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
.|++++|++.++++|++|||++|++++..-...-...++.+++++.+..
T Consensus 171 k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 171 KCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred ceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccC
Confidence 9999999999999999999999999996444444455889999988764
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.89 E-value=1.9e-22 Score=176.76 Aligned_cols=175 Identities=22% Similarity=0.384 Sum_probs=125.3
Q ss_pred EEEecccccccccccchHHHHHH-HHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 87 viFDlDGTLid~~~~~~~~a~~~-~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
|+||+||||+|+... +..++.. ++++++.+ ++...+.... +.....+...+....+..
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELF---GKSYEEALERLLERFGID-------------- 59 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHT---TSHHHHHHHHHHHHHHHH--------------
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHh---CCCHHHHHHHhhhccchh--------------
Confidence 799999999999885 6778877 47777765 2222222222 112223333333333211
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh
Q 017067 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~ 245 (378)
.....+.+.+.......+++||+.++|+.|+++|++++++|| +....+...++.+|+.++|+. +++.++...
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn---~~~~~~~~~l~~~~~~~~f~~-i~~~~~~~~--- 131 (176)
T PF13419_consen 60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSN---GSRERIERVLERLGLDDYFDE-IISSDDVGS--- 131 (176)
T ss_dssp -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEES---SEHHHHHHHHHHTTHGGGCSE-EEEGGGSSS---
T ss_pred -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeec---CCccccccccccccccccccc-ccccchhhh---
Confidence 222223333332224578999999999999999999999999 456888899999999999997 444443311
Q ss_pred hccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017067 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGD 325 (378)
.||+|++ |+.+++++|++|++|++|||
T Consensus 132 ---------------------------------------~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD 158 (176)
T PF13419_consen 132 ---------------------------------------RKPDPDA--------------YRRALEKLGIPPEEILFVGD 158 (176)
T ss_dssp ---------------------------------------STTSHHH--------------HHHHHHHHTSSGGGEEEEES
T ss_pred ---------------------------------------hhhHHHH--------------HHHHHHHcCCCcceEEEEeC
Confidence 2666555 99999999999999999999
Q ss_pred CHhHHHHHHHcCCCEEEE
Q 017067 326 SQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 326 s~~Di~aA~~aG~~~i~v 343 (378)
+..|+++|+++||++|+|
T Consensus 159 ~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 159 SPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHcCCeEEeC
Confidence 999999999999999986
No 36
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.86 E-value=7.9e-21 Score=172.92 Aligned_cols=183 Identities=11% Similarity=0.044 Sum_probs=121.3
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCC------hHHHHHHHHHHcCCCCCCCchh
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD------EDRMLVLFFNRIGWPTSVPTNE 158 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~g~~~~l~~~~ 158 (378)
++|||||||||+|+... +..+++.+++++|.. ..+.+.+..+.+..... ...+...+...... .......
T Consensus 1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 76 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSE-RVRDAPT 76 (197)
T ss_pred CceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccch-hccCCcc
Confidence 37999999999999997 899999999999854 25656666555422110 01122222111100 0000011
Q ss_pred hHHHHHHHHHHHHHHHHHHHh------c--CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 159 KKAFVKNVLQEKKNALDEFLA------S--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~l~------~--~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
.+.+.+.+.+.|..... . ....+.+++.++|+.|+++|++++|+||+ ....+..+++.+|+.++|
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f 149 (197)
T TIGR01548 77 ----LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGR---PRKDAAKFLTTHGLEILF 149 (197)
T ss_pred ----HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCC---CHHHHHHHHHHcCchhhC
Confidence 12333333333332100 0 02346677799999999999999999994 468899999999999999
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+. +++.+++.. ||+|++ |..++
T Consensus 150 ~~-~~~~~~~~~-------------------------------------------KP~p~~--------------~~~~~ 171 (197)
T TIGR01548 150 PV-QIWMEDCPP-------------------------------------------KPNPEP--------------LILAA 171 (197)
T ss_pred CE-EEeecCCCC-------------------------------------------CcCHHH--------------HHHHH
Confidence 87 444433211 555554 89999
Q ss_pred HHcCCCCCcEEEEeCCHhHHHHHHHc
Q 017067 311 EYAEKPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 311 ~~lgv~p~~~i~VGDs~~Di~aA~~a 336 (378)
+++|++|++|++|||+.+|+++|+++
T Consensus 172 ~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 172 KALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999875
No 37
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.86 E-value=3.2e-21 Score=173.43 Aligned_cols=177 Identities=16% Similarity=0.114 Sum_probs=114.9
Q ss_pred EEEEecccccccccccchHHHHHHHHH-----HcCCCCCCCChhHHH-HHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAPIYT-DLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~-----~~gl~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
+|+||+||||+|+... +..++++++. ++|++. .+..... .+.... |.... .+....+ .+.
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~-g~~~~---~~~~~~~----~~~--- 67 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREY-GTTLA---GLMILHE----IDA--- 67 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHH-chHHH---HHHHhhC----CCH---
Confidence 7999999999999875 6677776654 556652 1111111 111111 11111 1111111 110
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
+.+.+.+.+......++++||+.++|+.|+ ++++|+||+ ....+..+++.+|+..+|+. +++.++
T Consensus 68 --------~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~-i~~~~~ 132 (184)
T TIGR01993 68 --------DEYLRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDG-IFCFDT 132 (184)
T ss_pred --------HHHHHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCe-EEEeec
Confidence 112222222111124678999999999997 589999995 46889999999999999987 444444
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
..... .+.||+|++ |+.+++++|++|++
T Consensus 133 ~~~~~--------------------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 133 ANPDY--------------------------------------LLPKPSPQA--------------YEKALREAGVDPER 160 (184)
T ss_pred ccCcc--------------------------------------CCCCCCHHH--------------HHHHHHHhCCCccc
Confidence 32100 001666555 99999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+||||+..|+++|+++||++|+|
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999875
No 38
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.86 E-value=2.7e-21 Score=177.44 Aligned_cols=109 Identities=14% Similarity=0.121 Sum_probs=85.3
Q ss_pred CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 181 ~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
...+++||+.++|+.|+++|++++|+||.... .......+..+++..+|+.. ++++++.
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~-~~~~~~~~~~~~l~~~fd~v-~~s~~~~------------------- 149 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPT-DHSAEEALLPGDIMALFDAV-VESCLEG------------------- 149 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCc-cchhhhHhhhhhhHhhCCEE-EEeeecC-------------------
Confidence 35779999999999999999999999995421 11122334456788888874 3333221
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.+||+|++ |..+++++|++|++|+||||+..|+.+|+++||++
T Consensus 150 -----------------------~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 150 -----------------------LRKPDPRI--------------YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred -----------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 12777777 99999999999999999999999999999999999
Q ss_pred EEEcCCC
Q 017067 341 VVMRSSL 347 (378)
Q Consensus 341 i~v~~~~ 347 (378)
|++.++.
T Consensus 193 i~v~~~~ 199 (211)
T TIGR02247 193 IKVSDEE 199 (211)
T ss_pred EEECCHH
Confidence 9998763
No 39
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.85 E-value=4.5e-21 Score=174.89 Aligned_cols=107 Identities=13% Similarity=0.158 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+++||+.++|+.|+++|++++|+||+. .......+.. .++..+|+. +++++++..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~---~~~~~~~~~~~~~l~~~fd~-v~~s~~~~~-------------------- 139 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEVRAAADH-IYLSQDLGM-------------------- 139 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCc---hhhHHHHHhhchhHHHhcCE-EEEecccCC--------------------
Confidence 489999999999999999999999954 3444444443 477788877 444444321
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+||+|++ |+.+++++|++|++|+||||+..|+++|+++||++|+
T Consensus 140 ----------------------~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 140 ----------------------RKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 2777776 9999999999999999999999999999999999999
Q ss_pred EcCCCCCC
Q 017067 343 MRSSLTSR 350 (378)
Q Consensus 343 v~~~~~~~ 350 (378)
+.++.+..
T Consensus 184 ~~~~~~~~ 191 (199)
T PRK09456 184 VTDKQTIP 191 (199)
T ss_pred ecCCccHH
Confidence 98875543
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.85 E-value=1e-20 Score=168.54 Aligned_cols=100 Identities=24% Similarity=0.322 Sum_probs=82.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+||+. ... ..+..++|+..+|+..+ ++++...
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~---~~~-~~~~~~~~l~~~f~~i~-~~~~~~~-------------------- 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSP---RDH-AVLVQELGLRDLFDVVI-FSGDVGR-------------------- 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCc---hHH-HHHHHhcCCHHHCCEEE-EcCCCCC--------------------
Confidence 6799999999999999999999999954 344 55556699999998743 3322211
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+..|+++|+++||.+|+
T Consensus 139 ----------------------~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 139 ----------------------GKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 2666666 9999999999999999999999999999999999997
Q ss_pred E
Q 017067 343 M 343 (378)
Q Consensus 343 v 343 (378)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
No 41
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.85 E-value=9.6e-21 Score=175.05 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=105.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++|++.++|+.++.+ ++++|+|| +........++.+|+.++|+..+ .++++..
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTN---g~~~~~~~~l~~~gl~~~Fd~v~-~s~~~g~------------------- 152 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTN---GARPHQERKLRQLGLLDYFDAVF-ISEDVGV------------------- 152 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeC---CChHHHHHHHHHcCChhhhheEE-Eeccccc-------------------
Confidence 467999999999999999 99999999 45688999999999999999954 4433321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 340 (378)
.||+|.| |+.+++++|++|++|+||||+. |||.+|+++||++
T Consensus 153 -----------------------~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 153 -----------------------AKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred -----------------------CCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 2777777 9999999999999999999997 5779999999999
Q ss_pred EEEcCCCCCC-CCCCCCcEEecCCCcchHHHH
Q 017067 341 VVMRSSLTSR-AEFPSANAVMDGFGGADLTIS 371 (378)
Q Consensus 341 i~v~~~~~~~-~~l~~ad~vi~~l~e~~~~~~ 371 (378)
|++..+.... .....++..+.++.++...+.
T Consensus 196 vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 196 VWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9998775432 222457899999988865543
No 42
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.83 E-value=6.8e-20 Score=166.54 Aligned_cols=189 Identities=13% Similarity=0.159 Sum_probs=121.0
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+++|+|||||||+|+. .++.++++++|++. +.+...+ ++..... +...++.. .+ ..
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~-----~~~~~~~---g~~~~~~---~~~~~~~~----~~----~~ 57 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT-----DHILKMI---QDERFRD---PGELFGCD----QE----LA 57 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH-----HHHHHHH---hHhhhcC---HHHHhccc----HH----HH
Confidence 6899999999999944 45678888888862 2222222 1111111 11222211 01 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh---eeechhhH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEV 240 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~---~iv~~~~~ 240 (378)
..+.+.+.+ ... .....++||+.++|+.|+++ ++++++||.. .......++.+++..+|.. .+++.++.
T Consensus 58 ~~~~~~~~~---~~~-~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~---~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~ 129 (197)
T PHA02597 58 KKLIEKYNN---SDF-IRYLSAYDDALDVINKLKED-YDFVAVTALG---DSIDALLNRQFNLNALFPGAFSEVLMCGHD 129 (197)
T ss_pred HHHhhhhhH---HHH-HHhccCCCCHHHHHHHHHhc-CCEEEEeCCc---cchhHHHHhhCCHHHhCCCcccEEEEeccC
Confidence 222222221 111 22356999999999999997 5788889854 3444456677888765532 12222110
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
||.|++ |..+++++| |++|
T Consensus 130 ---------------------------------------------~~kp~~--------------~~~a~~~~~--~~~~ 148 (197)
T PHA02597 130 ---------------------------------------------ESKEKL--------------FIKAKEKYG--DRVV 148 (197)
T ss_pred ---------------------------------------------cccHHH--------------HHHHHHHhC--CCcE
Confidence 333333 999999999 8999
Q ss_pred EEEeCCHhHHHHHHHc--CCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 321 FLIAGSQSGVAGAQRI--GMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 321 i~VGDs~~Di~aA~~a--G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+||||+.+|+++|+++ ||++|++.++.. ...+.+++.+.++.|+.
T Consensus 149 v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 149 CFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred EEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHh
Confidence 9999999999999999 999999988854 44456678888887763
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.83 E-value=5e-20 Score=169.87 Aligned_cols=200 Identities=15% Similarity=0.197 Sum_probs=122.9
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
.+++++++|||||||++++. +..+++.+|.+. ....+.....++...+...+..++..-...+
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----- 73 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE------EVSEITERAMRGELDFKASLRERVALLKGLP----- 73 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH------HHHHHHHHHHcCCCCHHHHHHHHHHHhCCCC-----
Confidence 45678999999999999764 356666777641 1111211111111112112222221101110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
.+.+.... ...+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|...+...+.
T Consensus 74 ----------~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~- 137 (219)
T TIGR00338 74 ----------VELLKEVR--ENLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDG- 137 (219)
T ss_pred ----------HHHHHHHH--hcCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECC-
Confidence 01122222 1256999999999999999999999999 5578889999999999887654332211
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.+...+.+... . +++.+++ |+.++++++++|++|
T Consensus 138 ---~~~~~~~~~~~--------------------------------------~--~~~k~~~---~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ---KLTGLVEGPIV--------------------------------------D--ASYKGKT---LLILLRKEGISPENT 171 (219)
T ss_pred ---EEEEEecCccc--------------------------------------C--CcccHHH---HHHHHHHcCCCHHHE
Confidence 01111111000 0 1122333 899999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC-CCCcEEecCCC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF-PSANAVMDGFG 364 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l-~~ad~vi~~l~ 364 (378)
++|||+.+|+.+|+.+|+.+++-. ...+ +.|++++.+..
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~~~-----~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAFNA-----KPKLQQKADICINKKD 211 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEeCC-----CHHHHHhchhccCCCC
Confidence 999999999999999999865422 1223 35789888543
No 44
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.82 E-value=1.5e-19 Score=167.97 Aligned_cols=203 Identities=15% Similarity=0.194 Sum_probs=137.8
Q ss_pred CCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHh--------------hccC--ChHHHHH-
Q 017067 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------------KSAG--DEDRMLV- 142 (378)
Q Consensus 80 ~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~--------------~~~g--~~~~~~~- 142 (378)
..+++|+|+||++|||+.+... ....+.++.+.+|+++++ ........ ...| ....+..
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDD---SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCH---HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 4578899999999999986654 568899999999998522 11111111 1111 1122222
Q ss_pred HHHHHcCCCCCCCchhhHHHHHHHHHHH-HHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH
Q 017067 143 LFFNRIGWPTSVPTNEKKAFVKNVLQEK-KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (378)
Q Consensus 143 ~~~~~~g~~~~l~~~~~~~~i~~~~~~~-~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l 221 (378)
.+...++....- . .+...+.+ ...|.... .....+.+++.++++.||++|..++++||.. ...+.++
T Consensus 79 lv~~~f~~~~~~--~-----~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d----~r~~~~l 146 (237)
T KOG3085|consen 79 LVESTFGKAGID--Y-----EEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFD----DRLRLLL 146 (237)
T ss_pred HHHHHhccccch--h-----HHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCc----HHHHHHh
Confidence 222222221110 0 01111111 11111111 1256788999999999999999999999964 5666899
Q ss_pred HHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHH
Q 017067 222 EKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301 (378)
Q Consensus 222 ~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~ 301 (378)
..+|+..+|++.++|.+.. ..||+|.|
T Consensus 147 ~~~~l~~~fD~vv~S~e~g-------------------------------------------~~KPDp~I---------- 173 (237)
T KOG3085|consen 147 LPLGLSAYFDFVVESCEVG-------------------------------------------LEKPDPRI---------- 173 (237)
T ss_pred hccCHHHhhhhhhhhhhhc-------------------------------------------cCCCChHH----------
Confidence 9999999999966555332 23888888
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCC
Q 017067 302 IVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPS 355 (378)
Q Consensus 302 ~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ 355 (378)
|+.+++++|+.|++|++|||.. ||+++|+++||+++.|.+..+...+++.
T Consensus 174 ----f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~ 224 (237)
T KOG3085|consen 174 ----FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEY 224 (237)
T ss_pred ----HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhh
Confidence 9999999999999999999986 7899999999999999988776655543
No 45
>PLN02954 phosphoserine phosphatase
Probab=99.82 E-value=2.4e-19 Score=165.96 Aligned_cols=209 Identities=13% Similarity=0.139 Sum_probs=127.1
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+|+|+|||||||++++.. ..+++.+|.+ ....+......+....+.+.+..+++.... .
T Consensus 10 ~~~k~viFDfDGTL~~~~~~------~~~~~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~------ 70 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGI------DELAEFCGAG------EAVAEWTAKAMGGSVPFEEALAARLSLFKP-S------ 70 (224)
T ss_pred ccCCEEEEeCCCcccchHHH------HHHHHHcCCh------HHHHHHHHHHHCCCCCHHHHHHHHHHHcCC-C------
Confidence 46889999999999998663 7788888875 222333322222233333333333332110 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc--ccchheeechhh
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEE 239 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~--~~f~~~iv~~~~ 239 (378)
. + .+.+.+......++||+.++|+.|+++|++++|+|+ +....+..+++.+|+. .+|...+...++
T Consensus 71 -~----~----~~~~~~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~ 138 (224)
T PLN02954 71 -L----S----QVEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDS 138 (224)
T ss_pred -H----H----HHHHHHHHccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCC
Confidence 0 1 111222122356899999999999999999999999 5578899999999997 355432222211
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
. .+.|.... +|. +..+++++. ++.+++.+|. ++
T Consensus 139 g-------~~~g~~~~------------------------------~~~-----~~~~~K~~~---i~~~~~~~~~--~~ 171 (224)
T PLN02954 139 G-------EYAGFDEN------------------------------EPT-----SRSGGKAEA---VQHIKKKHGY--KT 171 (224)
T ss_pred C-------cEECccCC------------------------------Ccc-----cCCccHHHH---HHHHHHHcCC--Cc
Confidence 0 00000000 000 001122233 7888888885 69
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCC-CCCCcEEecCCCcchH
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAE-FPSANAVMDGFGGADL 368 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-l~~ad~vi~~l~e~~~ 368 (378)
|++|||+.+|+.+|+++|+.+++...+...... ...++++++++.++..
T Consensus 172 ~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 172 MVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred eEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 999999999999999988887665443222222 2348999999988743
No 46
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.80 E-value=6.4e-19 Score=153.57 Aligned_cols=154 Identities=22% Similarity=0.339 Sum_probs=107.7
Q ss_pred EEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
+|+||+||||+|+... +..+|++++++++.+. +.+.... |........+.. .
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~----g~~~~~~~~~~~------------------~ 52 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGEDF-----QALKALR----GLAEELLYRIAT------------------S 52 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhcccH-----HHHHHHH----ccChHHHHHHHH------------------H
Confidence 4899999999999875 7899999999988541 2222221 111111101000 0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh
Q 017067 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~ 245 (378)
.++... | ......+||+.++|+.|+++|++++|+||+. ...+...++.+ +..+|+. +++.++..
T Consensus 53 -~~~~~~-~-----~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~---~~~~~~~~~~~-l~~~f~~-i~~~~~~~---- 116 (154)
T TIGR01549 53 -FEELLG-Y-----DAEEAYIRGAADLLKRLKEAGIKLGIISNGS---LRAQKLLLRKH-LGDYFDL-ILGSDEFG---- 116 (154)
T ss_pred -HHHHhC-c-----chhheeccCHHHHHHHHHHCcCeEEEEeCCc---hHHHHHHHHHH-HHhcCcE-EEecCCCC----
Confidence 111111 1 1234578999999999999999999999954 57788888887 7777776 33333221
Q ss_pred hccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017067 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGD 325 (378)
.||+|++ |..+++++|++| +|++|||
T Consensus 117 ---------------------------------------~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGD 142 (154)
T TIGR01549 117 ---------------------------------------AKPEPEI--------------FLAALESLGLPP-EVLHVGD 142 (154)
T ss_pred ---------------------------------------CCcCHHH--------------HHHHHHHcCCCC-CEEEEeC
Confidence 1666555 999999999999 9999999
Q ss_pred CHhHHHHHHHcC
Q 017067 326 SQSGVAGAQRIG 337 (378)
Q Consensus 326 s~~Di~aA~~aG 337 (378)
+..|+++|+++|
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999999997
No 47
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.80 E-value=7.8e-20 Score=162.70 Aligned_cols=167 Identities=17% Similarity=0.188 Sum_probs=110.6
Q ss_pred EEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhH-HHHHHhhccCChH---H----HHHHHHHHcCCCCCCCch
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDED---R----MLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~-~~~~~~~~~g~~~---~----~~~~~~~~~g~~~~l~~~ 157 (378)
+|+||+||||+|++.. +..+++.++.+.+.....|+... .........+... . ....+..++|.+.. .
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~ 76 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE---P 76 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC---H
Confidence 5899999999999986 77888877776443100022111 1111211111111 1 33445555665421 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
... +.+.+.+ ..++++||+.++|+ +++|+||+ .......+++++|+..+|+. +++.
T Consensus 77 -------~~~----~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~-v~~~ 132 (175)
T TIGR01493 77 -------KYG----ERLRDAY--KNLPPWPDSAAALA-------RVAILSNA---SHWAFDQFAQQAGLPWYFDR-AFSV 132 (175)
T ss_pred -------HHH----HHHHHHH--hcCCCCCchHHHHH-------HHhhhhCC---CHHHHHHHHHHCCCHHHHhh-hccH
Confidence 111 1222222 13569999999998 38899995 46888889999999999987 5566
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |+.+++++|++|
T Consensus 133 ~~~~~------------------------------------------~KP~p~~--------------f~~~~~~~~~~p 156 (175)
T TIGR01493 133 DTVRA------------------------------------------YKPDPVV--------------YELVFDTVGLPP 156 (175)
T ss_pred hhcCC------------------------------------------CCCCHHH--------------HHHHHHHHCCCH
Confidence 55422 2777776 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHc
Q 017067 318 RNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~a 336 (378)
++|+||||+.+||.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999864
No 48
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.78 E-value=1.3e-18 Score=170.12 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=125.8
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
...+++|+|||||||+..+ .+.++++..|.. ............++..+.+.+..++......+
T Consensus 107 ~~~~~LvvfDmDGTLI~~e------~i~eia~~~g~~------~~v~~it~~~m~Geldf~esl~~rv~~l~g~~----- 169 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQIE------CIDEIAKLAGTG------EEVAEVTERAMRGELDFEASLRQRVATLKGAD----- 169 (322)
T ss_pred ccCCCEEEEECCCCCcchH------HHHHHHHHhCCc------hHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCC-----
Confidence 3568999999999999544 447777777775 22222222222233333333333332111111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
+.+ +.... ..++++||+.++|+.|+++|++++|+|+ +...+.+.+.+.+|+...+...+..
T Consensus 170 ---~~i-------l~~v~--~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~lei---- 230 (322)
T PRK11133 170 ---ANI-------LQQVR--ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANELEI---- 230 (322)
T ss_pred ---HHH-------HHHHH--HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEEEE----
Confidence 011 11111 2367999999999999999999999999 5567888999999997755422111
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
..+.+...+.|+.+. .+++++. ++.+++++|+++++|
T Consensus 231 ~dg~ltg~v~g~iv~----------------------------------------~k~K~~~---L~~la~~lgi~~~qt 267 (322)
T PRK11133 231 MDGKLTGNVLGDIVD----------------------------------------AQYKADT---LTRLAQEYEIPLAQT 267 (322)
T ss_pred ECCEEEeEecCccCC----------------------------------------cccHHHH---HHHHHHHcCCChhhE
Confidence 111222222222111 1122223 899999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~ 362 (378)
++|||+.||+.|++.||+.+++.+.+ .-...||+++++
T Consensus 268 IaVGDg~NDl~m~~~AGlgiA~nAkp----~Vk~~Ad~~i~~ 305 (322)
T PRK11133 268 VAIGDGANDLPMIKAAGLGIAYHAKP----KVNEQAQVTIRH 305 (322)
T ss_pred EEEECCHHHHHHHHHCCCeEEeCCCH----HHHhhCCEEecC
Confidence 99999999999999999988873333 223358999973
No 49
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.78 E-value=5.9e-18 Score=153.29 Aligned_cols=114 Identities=12% Similarity=0.098 Sum_probs=87.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+.+.+.. .
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g---~------------------ 134 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG---F------------------ 134 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC---e------------------
Confidence 56999999999999999999999999 55789999999999988776544333210 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhcccccc-CCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i-~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||++.. ..|.+ ..++ +..+++++|+++++|++|||+.+|+.+|+.+|++++
T Consensus 135 ----------------------~~p~~~~~~~~~~--k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 135 ----------------------IQPDGIVRVTFDN--KGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred ----------------------EecceeeEEcccc--HHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 0333221 11222 2233 788889999999999999999999999999999888
Q ss_pred EEcCCC
Q 017067 342 VMRSSL 347 (378)
Q Consensus 342 ~v~~~~ 347 (378)
+.+++.
T Consensus 188 ~~~~~~ 193 (201)
T TIGR01491 188 LGDEGH 193 (201)
T ss_pred ECCCcc
Confidence 876653
No 50
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.76 E-value=2.9e-17 Score=152.56 Aligned_cols=209 Identities=13% Similarity=0.074 Sum_probs=126.8
Q ss_pred ccEEEEecccccccccccchHHHHHHHHH---HcCCCCCCCChhHHHHHHhhccC-ChHHHHHHHHHHcCCCCCCCchhh
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQ---KLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~---~~gl~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
+++|+||+.||+.+.... +...|-.+.+ ++-- .+|..+...++....+. ..+.+.+.+...+......+
T Consensus 1 ~~~~l~diegt~~~isfv-~~~lfpy~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~---- 73 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFV-HDVLFPYAASRLESFVN--DNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKAT---- 73 (220)
T ss_pred CCEEEEecCCCcccHHHH-HhhhhHHHHHHHHHHHH--HhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcc----
Confidence 478999999999997654 3333322222 2111 13444444443322111 01333333333332222211
Q ss_pred HHHHHHHHHH-HHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh---Cccccchheee
Q 017067 160 KAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIV 235 (378)
Q Consensus 160 ~~~i~~~~~~-~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l---gi~~~f~~~iv 235 (378)
-.+.++.. +.+.|.+. ....+++||+.++|++|+++|++++|+||.+ ....+.+++.. ++..+|+..+
T Consensus 74 --~lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s---~~~~~~~~~~~~~~~L~~~f~~~f- 145 (220)
T TIGR01691 74 --PLKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGS---VPAQKLLFGHSDAGNLTPYFSGYF- 145 (220)
T ss_pred --hHHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhhccccchhhhcceEE-
Confidence 12333333 33444331 2246799999999999999999999999954 46666666665 5556665421
Q ss_pred chhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC
Q 017067 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (378)
Q Consensus 236 ~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv 315 (378)
.. .. +.||+|++ |..+++++|+
T Consensus 146 d~-~~-------------------------------------------g~KP~p~~--------------y~~i~~~lgv 167 (220)
T TIGR01691 146 DT-TV-------------------------------------------GLKTEAQS--------------YVKIAGQLGS 167 (220)
T ss_pred Ee-Cc-------------------------------------------ccCCCHHH--------------HHHHHHHhCc
Confidence 10 00 12666666 9999999999
Q ss_pred CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC-CC-cEEecCCCc
Q 017067 316 PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP-SA-NAVMDGFGG 365 (378)
Q Consensus 316 ~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~-~a-d~vi~~l~e 365 (378)
+|++|+||||+..|+++|+++||++|++.++......-. .. .-++.+|.+
T Consensus 168 ~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~ 219 (220)
T TIGR01691 168 PPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA 219 (220)
T ss_pred ChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence 999999999999999999999999999876643311111 11 456777665
No 51
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.71 E-value=3.8e-17 Score=151.40 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=92.3
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++||+.++|+.|+++|++++|+|| +....+..+++.+ +.. +. +++++. ...++.+.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~--~~-i~~n~~--------~~~~~~~~------ 130 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPK--EQ-IYCNGS--------DFSGEYIT------ 130 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCc--Cc-EEEeEE--------EecCCeeE------
Confidence 367999999999999999999999999 4568899999987 643 11 222110 01111111
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCC-CCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~k-p~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
..||+|.... ....... ...+++.++.++++|++|||+.+|+.+|++||+.+
T Consensus 131 ----------------------~~kp~p~~~~~~~~~~~~-----K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 131 ----------------------ITWPHPCDEHCQNHCGCC-----KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred ----------------------EeccCCccccccccCCCc-----hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 1255554310 0000000 23568889999999999999999999999999843
Q ss_pred EEEcCCCCC-CCCCCCCcEEecCCCcchHHHHHHh
Q 017067 341 VVMRSSLTS-RAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 341 i~v~~~~~~-~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+ .+.... ..+...+.+.++++.|+...+..+.
T Consensus 184 a--~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 184 A--RDFLITKCEELGIPYTPFETFHDVQTELKHLL 216 (219)
T ss_pred e--HHHHHHHHHHcCCCccccCCHHHHHHHHHHHh
Confidence 3 221111 1233447788899999876665543
No 52
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.70 E-value=3.6e-17 Score=142.51 Aligned_cols=107 Identities=14% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCc------------hHHHHHHHHHhCccccchhe-eec-hhhHHHhhhhccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIK-IVG-NEEVERSLYGQFV 249 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~------------~~~~~~~l~~lgi~~~f~~~-iv~-~~~~~~~~~~~~v 249 (378)
.++||+.++|+.|+++|++++|+||..+.. ...+...++.+|+...+.+. ..+ .+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNC--------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCC---------
Confidence 378999999999999999999999964200 13456677888886322110 000 0000
Q ss_pred cccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhH
Q 017067 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (378)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~D 329 (378)
..+||+|++ |+.+++++|++|++|+||||+..|
T Consensus 98 ---------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~D 130 (147)
T TIGR01656 98 ---------------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRD 130 (147)
T ss_pred ---------------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHH
Confidence 012666665 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 017067 330 VAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 330 i~aA~~aG~~~i~v~~~ 346 (378)
+++|+++||++|++.++
T Consensus 131 i~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 131 LQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHCCCCEEEecCC
Confidence 99999999999999864
No 53
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.66 E-value=6.3e-16 Score=140.95 Aligned_cols=132 Identities=12% Similarity=0.110 Sum_probs=89.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
++++||+.++|+.|+++ ++++|+|| +....++.+++.+|+..+|...+...++. ++.|..
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------~i~~~~--------- 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------MITGYD--------- 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCC-------eEECcc---------
Confidence 56899999999999999 99999999 55789999999999988876533222110 000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+ +.|.+ ...+++.++..+++|++|||+.+|+.+++++|+.+.+
T Consensus 127 -----------------------~-------~~p~~-------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~ 169 (205)
T PRK13582 127 -----------------------L-------RQPDG-------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF 169 (205)
T ss_pred -----------------------c-------cccch-------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE
Confidence 0 11222 2333556666779999999999999999999986643
Q ss_pred EcCCCCCCCCCCCCcE-EecCCCcchHHHHHHh
Q 017067 343 MRSSLTSRAEFPSANA-VMDGFGGADLTISKLR 374 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~-vi~~l~e~~~~~~~l~ 374 (378)
.... ...-..++. +++++.++-..+.+..
T Consensus 170 -~~~~--~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 170 -RPPA--NVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred -CCCH--HHHHhCCcccccCCHHHHHHHHHHHH
Confidence 2221 111123444 8999999876666544
No 54
>PRK06769 hypothetical protein; Validated
Probab=99.66 E-value=1.9e-16 Score=141.85 Aligned_cols=128 Identities=15% Similarity=0.150 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCC-----chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-----~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~ 258 (378)
.++|||.++|+.|+++|++++|+||+..- ........++.+|+..+|......++++.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----------------- 90 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCE----------------- 90 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCC-----------------
Confidence 48999999999999999999999996410 00123344667777665432111111110
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
.+||+|++ |+.++++++++|++|+||||+.+|+++|+++||
T Consensus 91 -------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 91 -------------------------CRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred -------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 13777777 999999999999999999999999999999999
Q ss_pred CEEEEcCCCCCC------CCCC--CCcEEecCCCcch
Q 017067 339 PCVVMRSSLTSR------AEFP--SANAVMDGFGGAD 367 (378)
Q Consensus 339 ~~i~v~~~~~~~------~~l~--~ad~vi~~l~e~~ 367 (378)
.+|++.++.... +++. .++++++++.|+.
T Consensus 132 ~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~ 168 (173)
T PRK06769 132 TTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAV 168 (173)
T ss_pred eEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHH
Confidence 999999876432 2332 4789999988874
No 55
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.66 E-value=4.9e-16 Score=139.29 Aligned_cols=136 Identities=11% Similarity=0.081 Sum_probs=92.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC----c--------hHHHHHHHHHhCccccchheeechhhHHHhhhhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~----~--------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~ 250 (378)
+.++||+.++|+.|+++|++++|+||+... . ......++..+++. |+..+.+.. .. .
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~-~~--------~ 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPH-HP--------E 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCC-CC--------c
Confidence 348999999999999999999999996520 0 01222344444444 222111110 00 0
Q ss_pred c-cccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhH
Q 017067 251 G-KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (378)
Q Consensus 251 g-~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~D 329 (378)
+ ..+. +-+.++||+|++ |..+++++|++|++|+||||+.+|
T Consensus 94 ~~~~~~------------------------~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~D 135 (176)
T TIGR00213 94 GVEEFR------------------------QVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLED 135 (176)
T ss_pred cccccc------------------------CCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHH
Confidence 0 0000 001134777777 999999999999999999999999
Q ss_pred HHHHHHcCCCE-EEEcCCCCCCCCC-CCCcEEecCCCcch
Q 017067 330 VAGAQRIGMPC-VVMRSSLTSRAEF-PSANAVMDGFGGAD 367 (378)
Q Consensus 330 i~aA~~aG~~~-i~v~~~~~~~~~l-~~ad~vi~~l~e~~ 367 (378)
|++|+++|+++ +++.++....... ..||++++++.++.
T Consensus 136 i~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 136 MQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 99999999998 7998886544444 34899999998873
No 56
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.65 E-value=6.2e-16 Score=131.72 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCc-----hHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~-----~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
++||+.++|+.|+++|++++|+||..... ...++.+++.+++...+. +++. .
T Consensus 26 ~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~---~------------------ 82 (132)
T TIGR01662 26 LYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL--YACP---H------------------ 82 (132)
T ss_pred eCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE--EECC---C------------------
Confidence 78999999999999999999999943000 456778889998863332 1111 0
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc-CCCCCcEEEEeC-CHhHHHHHHHcC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGAQRIG 337 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l-gv~p~~~i~VGD-s~~Di~aA~~aG 337 (378)
..||+|++ |+.+++++ +++|++|+|||| +.+|+.+|+++|
T Consensus 83 ------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~G 124 (132)
T TIGR01662 83 ------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAG 124 (132)
T ss_pred ------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHHHHCC
Confidence 12666665 99999999 599999999999 799999999999
Q ss_pred CCEEEEc
Q 017067 338 MPCVVMR 344 (378)
Q Consensus 338 ~~~i~v~ 344 (378)
+++|+++
T Consensus 125 i~~i~~~ 131 (132)
T TIGR01662 125 LAFILVA 131 (132)
T ss_pred CeEEEee
Confidence 9999986
No 57
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.64 E-value=1.4e-16 Score=142.70 Aligned_cols=107 Identities=11% Similarity=0.093 Sum_probs=85.4
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc---------ccchheeechhhHHHhhhhcccccc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLGK 252 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~---------~~f~~~iv~~~~~~~~~~~~~v~g~ 252 (378)
...++||+.++|+.|+++|++++|+||+. ....++.+++.+++. ++|+.. ++.++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~--~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~i-v~~~~~~----------- 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWND--VPEWAYEILGTFEITYAGKTVPMHSLFDDR-IEIYKPN----------- 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCC--ChHHHHHHHHhCCcCCCCCcccHHHhceee-eeccCCc-----------
Confidence 46799999999999999999999999951 467888999999998 888774 3332210
Q ss_pred ccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc--CCCCCcEEEEeCCHhHH
Q 017067 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 253 ~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l--gv~p~~~i~VGDs~~Di 330 (378)
.+++.+.+ ++.+.+.+ |++|++|+||||+..|+
T Consensus 109 ------------------------------------------~~kp~~~i---~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 109 ------------------------------------------KAKQLEMI---LQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred ------------------------------------------hHHHHHHH---HHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 02233333 66666777 89999999999999999
Q ss_pred HHHHHcCCCEEEEcCCC
Q 017067 331 AGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~~ 347 (378)
++|+++|+.++++.++.
T Consensus 144 ~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 144 REVWGYGVTSCYCPSGM 160 (174)
T ss_pred HHHHHhCCEEEEcCCCc
Confidence 99999999999998874
No 58
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.63 E-value=1.4e-15 Score=136.86 Aligned_cols=134 Identities=14% Similarity=0.069 Sum_probs=94.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCC----c--------hHHHHHHHHHhCccccchheeechhhHHHhhhhccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~----~--------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g 251 (378)
.++||+.++|+.|+++|++++|+||.+.. . ......+++.+|+ .|+..+.+.... .
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~----------~ 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHP----------E 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCC----------C
Confidence 48999999999999999999999996410 0 1223344556665 243322211000 0
Q ss_pred cccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH
Q 017067 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 252 ~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~ 331 (378)
+.+. .+||+|++ |..+++++|++|++|+||||+.+|+.
T Consensus 97 ~~~~----------------------------~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di~ 134 (181)
T PRK08942 97 DGCD----------------------------CRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDLQ 134 (181)
T ss_pred CCCc----------------------------CCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHH
Confidence 0000 12777666 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCC-CCC--cEEecCCCcchHHHH
Q 017067 332 GAQRIGMPCVVMRSSLTSRAEF-PSA--NAVMDGFGGADLTIS 371 (378)
Q Consensus 332 aA~~aG~~~i~v~~~~~~~~~l-~~a--d~vi~~l~e~~~~~~ 371 (378)
+|+++||++|++.++....... ..+ +++++++.++...+.
T Consensus 135 ~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 135 AAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 9999999999998876543322 235 899999998865443
No 59
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.63 E-value=6.7e-15 Score=138.08 Aligned_cols=109 Identities=9% Similarity=0.169 Sum_probs=79.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+.+++.++|+.++++|++++++||...+ .+..++.+++.+|+..+|+. +++.+....
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~-i~~~d~~~~------------------- 172 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPV-IFAGDKPGQ------------------- 172 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeE-EECCCCCCC-------------------
Confidence 347777999999999999999999996321 45678888999999998875 444432210
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||+ + . .+++.+|+ ++||||+.+|+.+|+++|+++|
T Consensus 173 -----------------------~Kp~---------~-------~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 173 -----------------------YQYT---------K-------T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred -----------------------CCCC---------H-------H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEE
Confidence 0221 1 2 23566776 8999999999999999999999
Q ss_pred EEcCCCCCC-CCCCC
Q 017067 342 VMRSSLTSR-AEFPS 355 (378)
Q Consensus 342 ~v~~~~~~~-~~l~~ 355 (378)
.+.++..+. ..++.
T Consensus 209 ~V~~g~~s~~~~~~~ 223 (237)
T TIGR01672 209 RILRASNSTYKPLPQ 223 (237)
T ss_pred EEEecCCCCCCCccc
Confidence 998776543 34444
No 60
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.62 E-value=2.3e-15 Score=136.28 Aligned_cols=132 Identities=15% Similarity=0.160 Sum_probs=98.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.++|.+..+++|-.|++++ ..+.|| ++...+.++++++|++++|+.+++....-.. +
T Consensus 98 ~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieDcFegii~~e~~np~---------~--------- 154 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIEDCFEGIICFETLNPI---------E--------- 154 (244)
T ss_pred hcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHHhccceeEeeccCCC---------C---------
Confidence 4778899999999999875 889999 5569999999999999999986543311100 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC-CCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~-p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.+-+-||+++ ||+.+.+..|+. |.+++||+||.++|++|++.||++
T Consensus 155 --------------------------~~~vcKP~~~-------afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~t 201 (244)
T KOG3109|consen 155 --------------------------KTVVCKPSEE-------AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKT 201 (244)
T ss_pred --------------------------CceeecCCHH-------HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhcccee
Confidence 1112233333 299999999998 999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 341 VVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
+++...... ..+|+++.+.......++.|
T Consensus 202 vlv~~~~~~----~~~d~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 202 VLVGREHKI----KGVDYALEQIHNNKEALPEL 230 (244)
T ss_pred EEEEeeecc----cchHHHHHHhhchhhhchHH
Confidence 999866333 34677777666665444443
No 61
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.9e-14 Score=133.04 Aligned_cols=187 Identities=17% Similarity=0.221 Sum_probs=127.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+..++++|||||||++.+ .+..+....|.. ..+.......+.....+...+..+..+-..++.+.
T Consensus 3 ~~~~L~vFD~D~TLi~~~------~~~~~~~~~g~~------~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~--- 67 (212)
T COG0560 3 RMKKLAVFDLDGTLINAE------LIDELARGAGVG------EEVLAITERAMRGELDFEESLRLRVALLKGLPVEV--- 67 (212)
T ss_pred CccceEEEecccchhhHH------HHHHHHHHhCCH------HHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHH---
Confidence 356799999999999933 345566666665 44444443333334444444444443333332111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
++.+.+ + ..++.||+.++++.++++|++++|+|+ ++...++.+.+.+|++..+...+...+
T Consensus 68 -v~~~~~-------~-----~~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d--- 128 (212)
T COG0560 68 -LEEVRE-------E-----FLRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD--- 128 (212)
T ss_pred -HHHHHH-------h-----cCcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC---
Confidence 111111 1 156999999999999999999999999 778999999999999998877543332
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
+.|++-+.|..+... .| ..+++..++.+|+++++++
T Consensus 129 -G~ltG~v~g~~~~~~---------~K----------------------------------~~~l~~~~~~~g~~~~~~~ 164 (212)
T COG0560 129 -GKLTGRVVGPICDGE---------GK----------------------------------AKALRELAAELGIPLEETV 164 (212)
T ss_pred -CEEeceeeeeecCcc---------hH----------------------------------HHHHHHHHHHcCCCHHHeE
Confidence 134444443332211 01 1237888999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
++|||.||+.|.+.+|.+.++-+.+
T Consensus 165 a~gDs~nDlpml~~ag~~ia~n~~~ 189 (212)
T COG0560 165 AYGDSANDLPMLEAAGLPIAVNPKP 189 (212)
T ss_pred EEcCchhhHHHHHhCCCCeEeCcCH
Confidence 9999999999999999999987766
No 62
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.59 E-value=5.5e-15 Score=131.60 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCc---------hHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~---------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
++||+.++|+.|+++|++++|+||..... ...+..+++.+|+.. .. +++.++..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~-ii~~~~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QV-LAATHAGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EE-EEecCCCC--------------
Confidence 68999999999999999999999964210 024577889999854 22 22222110
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCH------
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 327 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg--v~p~~~i~VGDs~------ 327 (378)
.+||+|++ |+.+++++| ++|++|+||||+.
T Consensus 106 ----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 106 ----------------------------YRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ----------------------------CCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 12777666 999999999 9999999999986
Q ss_pred --hHHHHHHHcCCCEEE
Q 017067 328 --SGVAGAQRIGMPCVV 342 (378)
Q Consensus 328 --~Di~aA~~aG~~~i~ 342 (378)
+|+++|+++|+++++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
No 63
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.58 E-value=6.7e-15 Score=135.94 Aligned_cols=140 Identities=18% Similarity=0.145 Sum_probs=86.4
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++||+.++|+.|+++|++++|+|+ +....+..+++.++....+ ++++-. ..++.+.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i----~~n~~~--------~~~~~~~------ 126 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRI----YCNEAD--------FSNEYIH------ 126 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccE----EeceeE--------eeCCeeE------
Confidence 367999999999999999999999999 4568888899887543322 221100 0111110
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCC-CcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp-~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
..||.|..... ...... -..++++++..+++|+||||+.+|+.+|+.||+
T Consensus 127 ----------------------~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~-- 177 (214)
T TIGR03333 127 ----------------------IDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL-- 177 (214)
T ss_pred ----------------------EeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--
Confidence 12555444210 000000 134566777789999999999999999999997
Q ss_pred EEEcCCCCC-CCCCCCCcEEecCCCcchHHHH
Q 017067 341 VVMRSSLTS-RAEFPSANAVMDGFGGADLTIS 371 (378)
Q Consensus 341 i~v~~~~~~-~~~l~~ad~vi~~l~e~~~~~~ 371 (378)
++.++.... .++...+...++++.|+...++
T Consensus 178 ~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 178 CFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred eEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 444432111 1222235566788877755554
No 64
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.58 E-value=7.8e-15 Score=140.97 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=54.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----------CCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----------SANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----------~ad~vi~~l~e~ 366 (378)
|..+++++|++|++|+||||+. +||++|+++||++|+|.+|....+++. .+|++++++.++
T Consensus 208 ~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 208 FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 8999999999999999999995 999999999999999999987654443 489999999875
No 65
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.58 E-value=3.2e-14 Score=129.41 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
.++||+.++|+.++++|++++|+|+ +....++.+++.+|+..+|...+...++ +.+. |
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~---g~~~----g------------ 144 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESED---GIYT----G------------ 144 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCC---CEEe----C------------
Confidence 5899999999999999999999999 5578999999999998877653322111 0111 1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.... ...+++. ..++..+++.++++++|+++|||.+|+.+++.+|.++++.
T Consensus 145 ----------------------~~~~~~--~~g~~K~---~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 ----------------------NIDGNN--CKGEGKV---HALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ----------------------CccCCC--CCChHHH---HHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 111000 0011112 2278888999999999999999999999999999988776
Q ss_pred cCC
Q 017067 344 RSS 346 (378)
Q Consensus 344 ~~~ 346 (378)
+++
T Consensus 198 ~~~ 200 (202)
T TIGR01490 198 PDK 200 (202)
T ss_pred CCC
Confidence 543
No 66
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.57 E-value=3.7e-14 Score=134.22 Aligned_cols=61 Identities=8% Similarity=0.218 Sum_probs=53.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~ 366 (378)
|+.+++++++++++++||||+. +||.+|+++||++++|.++.....++. .+|++++++.++
T Consensus 184 ~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 184 MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 9999999999999999999996 899999999999999999987655442 479999998764
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.55 E-value=8.9e-14 Score=124.41 Aligned_cols=111 Identities=19% Similarity=0.217 Sum_probs=74.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+. +++++....+ .+....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~-i~~~~~~~~~--------~g~~~~----- 133 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISD---GNDFFIDPVLEGIGEKDVFIE-IYSNPASFDN--------DGRHIV----- 133 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHHcCChhheeE-EeccCceECC--------CCcEEE-----
Confidence 57999999999999999999999999 446888999999999999987 5555432110 000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhcccc--ccC-CCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSV--DID-TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p--~i~-kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
-|.. ... .+....++++ |+...+.. +++|+||||+.+|+.+|+++++-
T Consensus 134 -----------------------~~~~~~~~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 134 -----------------------WPHHCHGCCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred -----------------------ecCCCCccCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 0000 000 0001112333 55555543 89999999999999999999743
No 68
>PLN02645 phosphoglycolate phosphatase
Probab=99.53 E-value=8.9e-14 Score=135.79 Aligned_cols=63 Identities=10% Similarity=-0.009 Sum_probs=55.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC------CCCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF------PSANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l------~~ad~vi~~l~e~~~ 368 (378)
|..+++++++++++|+||||+. +||++|+++||++|+|.++....+++ ..+|++++++.++..
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 8999999999999999999997 99999999999999999998765543 347999999998754
No 69
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.53 E-value=1.1e-13 Score=122.86 Aligned_cols=107 Identities=18% Similarity=0.266 Sum_probs=74.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.++++||+.++|+.++++|++++|+|+ +....++.+++.+|+...+...+...++. . ..|....
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~----~~g~~~~------ 134 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNG---L----LTGPIEG------ 134 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCC---E----EeCccCC------
Confidence 356899999999999999999999999 55789999999999987665543222110 0 0110000
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 336 (378)
||. |....+..+ ++..++..|+++++|++|||+.+|+.+++.|
T Consensus 135 ------------------------~~~-----~~~~~K~~~---l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 ------------------------QVN-----PEGECKGKV---LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ------------------------ccc-----CCcchHHHH---HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000 111122223 6777888899999999999999999998764
No 70
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.53 E-value=2.5e-14 Score=126.82 Aligned_cols=108 Identities=9% Similarity=0.115 Sum_probs=85.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC------------chHHHHHHHHHhCccccchheeec----hhhHHHhhhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVG----NEEVERSLYG 246 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~------------~~~~~~~~l~~lgi~~~f~~~iv~----~~~~~~~~~~ 246 (378)
++++||+.++|+.|+++|++++|+||.+.- ....+..+++.+|+. |+..+++ .++..
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~----- 100 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCD----- 100 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCC-----
Confidence 458999999999999999999999995300 134667788899996 5543343 12211
Q ss_pred ccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017067 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (378)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs 326 (378)
.+||+|++ |..++++++++|++|+||||+
T Consensus 101 -------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~ 129 (161)
T TIGR01261 101 -------------------------------------CRKPKIKL--------------LEPYLKKNLIDKARSYVIGDR 129 (161)
T ss_pred -------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCC
Confidence 23777666 999999999999999999999
Q ss_pred HhHHHHHHHcCCCEEEEcCCCC
Q 017067 327 QSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
.+|+++|+++||+++++..+..
T Consensus 130 ~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 130 ETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred HHHHHHHHHCCCeEEEEChhhc
Confidence 9999999999999999987743
No 71
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.52 E-value=1.5e-14 Score=137.53 Aligned_cols=127 Identities=15% Similarity=0.074 Sum_probs=88.5
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~ 264 (378)
.++++.+.++.|++.|++++++||..+ ......+..+|+..+|+.. ...... .
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~---~~~~~~~~~~g~g~~~~~i-~~~~~~-----------~------------ 173 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGR---YYKRKDGLALDVGPFVTAL-EYATDT-----------K------------ 173 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCC---CCcCCCCCCCCchHHHHHH-HHHhCC-----------C------------
Confidence 467888899999999999999999653 3223333445555555431 000000 0
Q ss_pred HHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEE
Q 017067 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (378)
Q Consensus 265 ~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v 343 (378)
.....||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++++|
T Consensus 174 ----------------~~~~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 174 ----------------ATVVGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred ----------------ceeecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 00012555555 9999999999999999999996 8999999999999999
Q ss_pred cCCCCCCC--CC--CCCcEEecCCCcchH
Q 017067 344 RSSLTSRA--EF--PSANAVMDGFGGADL 368 (378)
Q Consensus 344 ~~~~~~~~--~l--~~ad~vi~~l~e~~~ 368 (378)
.++..... +. ..+|++++++.|+..
T Consensus 224 ~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 224 RTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 98864322 12 347999999998854
No 72
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.52 E-value=1.4e-13 Score=114.92 Aligned_cols=116 Identities=19% Similarity=0.205 Sum_probs=83.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh-hhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL-YGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~-~~~~v~g~~v~~~~~~~ 261 (378)
..++|++.++|+.|+++|++++++|| +....+...++.+++...++.. ++.+...... ...... +
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~---~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~------~---- 88 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATN---KSRREVLELLEELGLDDYFDPV-ITSNGAAIYYPKEGLFL------G---- 88 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHHHcCCchhhhhe-eccchhhhhcccccccc------c----
Confidence 45899999999999999999999999 4578899999999998777763 3332221100 000000 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
......+||.+.. +..+++.++..++++++|||+.+|+++++.+|++++
T Consensus 89 -----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 89 -----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred -----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 0000111333322 888999999999999999999999999999999998
Q ss_pred EE
Q 017067 342 VM 343 (378)
Q Consensus 342 ~v 343 (378)
+|
T Consensus 138 ~v 139 (139)
T cd01427 138 AV 139 (139)
T ss_pred eC
Confidence 75
No 73
>PRK10444 UMP phosphatase; Provisional
Probab=99.52 E-value=5.2e-13 Score=126.39 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=62.6
Q ss_pred hhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCc
Q 017067 283 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SAN 357 (378)
Q Consensus 283 ~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad 357 (378)
..++|.. ++||+|.. |..++++++++|++|+||||+. +||.+|+++||++++|.++....+++. .+|
T Consensus 165 ~g~~~~~-~gKP~~~~-------~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd 236 (248)
T PRK10444 165 SGRKPFY-VGKPSPWI-------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPS 236 (248)
T ss_pred hCCCccc-cCCCCHHH-------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCC
Confidence 3444432 45555543 8999999999999999999996 899999999999999999988766553 489
Q ss_pred EEecCCCcch
Q 017067 358 AVMDGFGGAD 367 (378)
Q Consensus 358 ~vi~~l~e~~ 367 (378)
++++++.++.
T Consensus 237 ~~~~sl~el~ 246 (248)
T PRK10444 237 WIYPSVADID 246 (248)
T ss_pred EEECCHHHhh
Confidence 9999998873
No 74
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.51 E-value=1.8e-13 Score=125.77 Aligned_cols=191 Identities=14% Similarity=0.129 Sum_probs=115.2
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCC--CCCchhhHHH
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPT--SVPTNEKKAF 162 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~--~l~~~~~~~~ 162 (378)
+.++|||||||++. .|.+...+.|+.. . .... +....+..+...++.+.. .++.
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~------~-~~~~----~~~~~~~~~~~~r~~ll~~~g~~~------ 57 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA------L-KATT----RDIPDYDVLMKQRLRILDEHGLKL------ 57 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH------H-HHHh----cCCcCHHHHHHHHHHHHHHCCCCH------
Confidence 46899999999974 3677777888641 1 1111 122233334443332221 1211
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+.+.+.+. .++++||+.++|+.++++| +++|+|+ +....+..+++.+|+..+|...+...+.
T Consensus 58 ---------~~i~~~~~--~i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~--- 119 (203)
T TIGR02137 58 ---------GDIQEVIA--TLKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDS--- 119 (203)
T ss_pred ---------HHHHHHHH--hCCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecC---
Confidence 11123332 2569999999999999985 9999999 5679999999999999887654332210
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
+ .+.|..+. .+| .... +...++..|. +|++
T Consensus 120 g----~~tG~~~~------------------------------------~~~---~K~~----~l~~l~~~~~---~~v~ 149 (203)
T TIGR02137 120 D----RVVGYQLR------------------------------------QKD---PKRQ----SVIAFKSLYY---RVIA 149 (203)
T ss_pred C----eeECeeec------------------------------------Ccc---hHHH----HHHHHHhhCC---CEEE
Confidence 0 01111000 001 1111 2233345553 8999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc-EEecCCCcchHHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN-AVMDGFGGADLTI 370 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad-~vi~~l~e~~~~~ 370 (378)
|||+.||+.+++.||+++++...+..... ..| -++.++.|+...+
T Consensus 150 vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~---~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 150 AGDSYNDTTMLSEAHAGILFHAPENVIRE---FPQFPAVHTYEDLKREF 195 (203)
T ss_pred EeCCHHHHHHHHhCCCCEEecCCHHHHHh---CCCCCcccCHHHHHHHH
Confidence 99999999999999999999887744332 012 2566666664443
No 75
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.46 E-value=5.2e-13 Score=121.51 Aligned_cols=90 Identities=17% Similarity=0.271 Sum_probs=73.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++|++.++|+.|+++|++++++|+ .....+..+.+.+|+.+.. +++. ..
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~---v~a~-~~---------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSI---VFAR-VI---------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEE---EEES-HE----------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccc---cccc-cc----------------------
Confidence 46899999999999999999999998 5578999999999995521 1111 00
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcC
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 337 (378)
.||++.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 ----------------------~kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 ----------------------GKPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----------------------TTTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----------------------ccccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 0444443 89999999999999999999999999999997
No 76
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.45 E-value=3.8e-13 Score=120.14 Aligned_cols=104 Identities=14% Similarity=0.244 Sum_probs=83.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++||+.++|+.|+++|++++|+||... ...+..+++.+|+..++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~~gl~~~~~------------------------------ 88 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKALGIPVLPH------------------------------ 88 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHHcCCEEEcC------------------------------
Confidence 346899999999999999999999999531 355556666666543210
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 340 (378)
..||+|++ |..+++++|++|++|+||||+. .|+.+|+++||.+
T Consensus 89 ----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 89 ----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 01666666 9999999999999999999998 7999999999999
Q ss_pred EEEcCCCCCCCCC
Q 017067 341 VVMRSSLTSRAEF 353 (378)
Q Consensus 341 i~v~~~~~~~~~l 353 (378)
|++.++....+.+
T Consensus 133 i~v~~g~~~~~~~ 145 (170)
T TIGR01668 133 ILVEPLVHPDQWF 145 (170)
T ss_pred EEEccCcCCcccc
Confidence 9999887665433
No 77
>PRK11590 hypothetical protein; Provisional
Probab=99.45 E-value=3.6e-12 Score=117.58 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=112.4
Q ss_pred CccEEEEecccccccccccchHHHHHHHH-HHcCCCCCCCChhHHHHHHhhccCChHHH-----HHHHHH-HcCCCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM-----LVLFFN-RIGWPTSVP 155 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~-~~~gl~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~-~~g~~~~l~ 155 (378)
+.++++||+||||++... ...|..++ .++|++. .+...+..+++......... ...+.. ..|.+
T Consensus 5 ~~k~~iFD~DGTL~~~d~---~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~---- 75 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDM---FGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHS---- 75 (211)
T ss_pred cceEEEEecCCCCcccch---HHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCC----
Confidence 457999999999995543 47777777 7888762 22222222222111000000 000111 11221
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH-HHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhee
Q 017067 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (378)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL-~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~i 234 (378)
.+ .++.+.+.+.+.|.+. ..++||+.++| +.++++|++++|+|| ++...++.+++.+|+..... +
T Consensus 76 ~~----~~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~~~~--~ 141 (211)
T PRK11590 76 EA----RLQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLPRVN--L 141 (211)
T ss_pred HH----HHHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHccccccCc--e
Confidence 11 2334444444444332 45799999999 578889999999999 45788999999999633222 2
Q ss_pred echhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC
Q 017067 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (378)
Q Consensus 235 v~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg 314 (378)
++.+ .+. .|++.+.|.... . ++. .....+.+|
T Consensus 142 i~t~-l~~-~~tg~~~g~~c~------------------------------------------g-~~K---~~~l~~~~~ 173 (211)
T PRK11590 142 IASQ-MQR-RYGGWVLTLRCL------------------------------------------G-HEK---VAQLERKIG 173 (211)
T ss_pred EEEE-EEE-EEccEECCccCC------------------------------------------C-hHH---HHHHHHHhC
Confidence 3332 111 233333332110 0 001 233445557
Q ss_pred CCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 315 v~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
.+...+++.|||.+|+.+...+|-+.++-+++
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence 77889999999999999999999888775544
No 78
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.44 E-value=7.4e-13 Score=126.01 Aligned_cols=181 Identities=16% Similarity=0.202 Sum_probs=122.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechhhHHHhhhhcc-------c-----
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQF-------V----- 249 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~~~~~~~~~~~-------v----- 249 (378)
-.++||+.++|+.|+++|.+++++||+++.........++. .+++-..+. ++++.+.....+... +
T Consensus 23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~-i~TS~~at~~~l~~~~~~~kv~viG~~~ 101 (269)
T COG0647 23 NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD-IVTSGDATADYLAKQKPGKKVYVIGEEG 101 (269)
T ss_pred CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH-eecHHHHHHHHHHhhCCCCEEEEECCcc
Confidence 45899999999999999999999999987767756677777 445332222 333333333222111 0
Q ss_pred -------------c-c-----cccccCcchhhhHHH---------------------------HHHhhHHHHHHHHHHHh
Q 017067 250 -------------L-G-----KGISSGVDEQLATEA---------------------------RKAVSAQKQEIAEEVAS 283 (378)
Q Consensus 250 -------------~-g-----~~v~~~~~~~~~~~~---------------------------~ka~~~~~~~~~~~~~~ 283 (378)
. . +.|.-+.|+.+..+. .=-.++....-+-+.+.
T Consensus 102 l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~t 181 (269)
T COG0647 102 LKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQAT 181 (269)
T ss_pred hHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhh
Confidence 0 1 113333333333222 21112222222335666
Q ss_pred hhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCC----CcE
Q 017067 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPS----ANA 358 (378)
Q Consensus 284 ~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~----ad~ 358 (378)
.++| .-++||++.. |+.+++.++.++++++||||+. +||.+|.++||.++.|.+|.+..+++.. +++
T Consensus 182 g~~~-~~~GKP~~~i-------~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~ 253 (269)
T COG0647 182 GREP-TVIGKPSPAI-------YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTY 253 (269)
T ss_pred CCcc-cccCCCCHHH-------HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcc
Confidence 6777 7888877664 9999999999999999999996 7999999999999999999987666542 589
Q ss_pred EecCCCcchHHHHH
Q 017067 359 VMDGFGGADLTISK 372 (378)
Q Consensus 359 vi~~l~e~~~~~~~ 372 (378)
+++++.++...+..
T Consensus 254 v~~sl~~~~~~~~~ 267 (269)
T COG0647 254 VVDSLAELITALKE 267 (269)
T ss_pred hHhhHHHHHhhhhc
Confidence 99999998655543
No 79
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.42 E-value=1.6e-13 Score=105.98 Aligned_cols=69 Identities=16% Similarity=0.276 Sum_probs=62.3
Q ss_pred hhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCC----CCCcE
Q 017067 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEF----PSANA 358 (378)
Q Consensus 284 ~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l----~~ad~ 358 (378)
++||+|.+ |..++++++++|++|+||||+ .+||.+|+++||.+|+|.++....+++ ..+|+
T Consensus 2 ~gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~ 67 (75)
T PF13242_consen 2 CGKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDY 67 (75)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSE
T ss_pred CCCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCE
Confidence 46888887 999999999999999999999 899999999999999999998877654 36899
Q ss_pred EecCCCcc
Q 017067 359 VMDGFGGA 366 (378)
Q Consensus 359 vi~~l~e~ 366 (378)
|+++|.|+
T Consensus 68 vv~~l~e~ 75 (75)
T PF13242_consen 68 VVDDLKEA 75 (75)
T ss_dssp EESSGGGH
T ss_pred EECCHHhC
Confidence 99999875
No 80
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.37 E-value=7.1e-12 Score=117.61 Aligned_cols=107 Identities=8% Similarity=0.188 Sum_probs=77.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCc--cccchheeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi--~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
..+.||+.++|+.|+++|++++++||...+ ....+..+++.+|+ .++|.. +++.+..
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v-il~gd~~------------------- 172 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV-IFAGDKP------------------- 172 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE-EEcCCCC-------------------
Confidence 568999999999999999999999995421 23466677777999 888865 3333211
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
.||+ + ..+++.+++ +|||||+.+|+.+|++||++
T Consensus 173 -------------------------~K~~-------K----------~~~l~~~~i----~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -------------------------GQYT-------K----------TQWLKKKNI----RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------------------------CCCC-------H----------HHHHHhcCC----eEEEcCCHHHHHHHHHcCCc
Confidence 0222 1 113456665 99999999999999999999
Q ss_pred EEEEcCCCCCC-CCCCC
Q 017067 340 CVVMRSSLTSR-AEFPS 355 (378)
Q Consensus 340 ~i~v~~~~~~~-~~l~~ 355 (378)
+|.+.++.... ..++.
T Consensus 207 ~I~v~~G~~~~~~~~~~ 223 (237)
T PRK11009 207 GIRILRAANSTYKPLPQ 223 (237)
T ss_pred EEEEecCCCCCCCcccc
Confidence 99999886643 34443
No 81
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.28 E-value=6.7e-11 Score=113.04 Aligned_cols=141 Identities=21% Similarity=0.259 Sum_probs=94.6
Q ss_pred CCCCCchhhHHHHHHHHHHHHH----------HHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 017067 151 PTSVPTNEKKAFVKNVLQEKKN----------ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV 220 (378)
Q Consensus 151 ~~~l~~~~~~~~i~~~~~~~~~----------~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~ 220 (378)
...++.+|+-..+.++.....+ ...+.+....++++||+.++++.|+++|++++|+|+ +....++.+
T Consensus 78 d~~~~~~eK~~~m~eWw~k~~~l~~~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~v 154 (277)
T TIGR01544 78 DPVLTVEEKYPYMVEWWTKSHGLLVQQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEV 154 (277)
T ss_pred CCCCChHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHH
Confidence 3345566665555555544332 233344334688999999999999999999999999 667999999
Q ss_pred HHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhH
Q 017067 221 VEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLD 300 (378)
Q Consensus 221 l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~ 300 (378)
++.+|+.+.+.. ++++.-. ...+++..| ||.|-|.. -...
T Consensus 155 L~~lgl~~~~~~-IvSN~L~--------f~~dGvltG----------------------------~~~P~i~~---~~K~ 194 (277)
T TIGR01544 155 LRQAGVYHPNVK-VVSNFMD--------FDEDGVLKG----------------------------FKGPLIHT---FNKN 194 (277)
T ss_pred HHHcCCCCcCce-EEeeeEE--------ECCCCeEeC----------------------------CCCCcccc---cccH
Confidence 999998765533 5444211 112233333 44443311 1111
Q ss_pred HHHHHHHHHHHHcC--CCCCcEEEEeCCHhHHHHHHHc
Q 017067 301 KIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 301 ~~~~a~~~a~~~lg--v~p~~~i~VGDs~~Di~aA~~a 336 (378)
+. +++.++++++ +++++||+|||+.+|+.||..+
T Consensus 195 ~~--v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 195 HD--VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HH--HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 11 2667889999 8999999999999999998766
No 82
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.28 E-value=7.4e-12 Score=121.09 Aligned_cols=113 Identities=13% Similarity=0.051 Sum_probs=86.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcch
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
...++||+.++|+.|+++|++++++||. .....+..++.+++.. +|+. +++.+.... +.. .
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r---~~~~~~~~l~~l~~~~~~f~~-i~~~~~~~~-~~~------~------- 246 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGR---DGVCEEDTVEWLRQTDIWFDD-LIGRPPDMH-FQR------E------- 246 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCC---ChhhHHHHHHHHHHcCCchhh-hhCCcchhh-hcc------c-------
Confidence 3568999999999999999999999994 4688889999999987 7876 333331110 000 0
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC-CCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv-~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
...+||+|++ +..++++++. +|++|++|||+.+|+++|+++||+
T Consensus 247 ---------------------~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 247 ---------------------QGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred ---------------------CCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 0011444444 8888999998 689999999999999999999999
Q ss_pred EEEEcCCC
Q 017067 340 CVVMRSSL 347 (378)
Q Consensus 340 ~i~v~~~~ 347 (378)
+|+|.+|.
T Consensus 292 ~i~v~~g~ 299 (300)
T PHA02530 292 CWQVAPGD 299 (300)
T ss_pred EEEecCCC
Confidence 99998763
No 83
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.27 E-value=1.2e-11 Score=110.32 Aligned_cols=173 Identities=14% Similarity=0.250 Sum_probs=117.3
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
-++|.||||.|++.-+.+ .+.....|+. +......+..++++..+.+.+.+++.+-..+
T Consensus 16 ~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~--------- 74 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLSLLQPL--------- 74 (227)
T ss_pred cCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHHHhccc---------
Confidence 469999999999987775 5555555765 6666777777777777777777777544321
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc--cchheeechhhHH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVE 241 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~--~f~~~iv~~~~~~ 241 (378)
.. ....++......+-||+++++..|+++|..++++|+ ++..++..+...||+.. .+...+....+.
T Consensus 75 ----~~---qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G- 143 (227)
T KOG1615|consen 75 ----QV---QVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANELLFDKDG- 143 (227)
T ss_pred ----HH---HHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhheeeeccCC-
Confidence 11 112333344677999999999999999999999999 88999999999999976 554433322211
Q ss_pred Hhhhhcc-ccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 242 RSLYGQF-VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 242 ~~~~~~~-v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
+|..+ ..+..+.++ ...++ ++...+ +++-..+
T Consensus 144 --k~~gfd~~~ptsdsg----------------------------------------gKa~~---i~~lrk--~~~~~~~ 176 (227)
T KOG1615|consen 144 --KYLGFDTNEPTSDSG----------------------------------------GKAEV---IALLRK--NYNYKTI 176 (227)
T ss_pred --cccccccCCccccCC----------------------------------------ccHHH---HHHHHh--CCChhee
Confidence 12111 111111221 11222 444444 8889999
Q ss_pred EEEeCCHhHHHHHHH
Q 017067 321 FLIAGSQSGVAGAQR 335 (378)
Q Consensus 321 i~VGDs~~Di~aA~~ 335 (378)
+||||+.+|++|..-
T Consensus 177 ~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 177 VMVGDGATDLEAMPP 191 (227)
T ss_pred EEecCCccccccCCc
Confidence 999999999988766
No 84
>PRK08238 hypothetical protein; Validated
Probab=99.25 E-value=9e-11 Score=120.73 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=72.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.++++||+.++|++++++|++++++||+ ....++.+++++|+ |+. +++.++..+.
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas---~~~~a~~i~~~lGl---Fd~-Vigsd~~~~~------------------ 124 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATAS---DERLAQAVAAHLGL---FDG-VFASDGTTNL------------------ 124 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCC---CCE-EEeCCCcccc------------------
Confidence 4678999999999999999999999994 46889999999997 554 4555433210
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
| |++| .....+.++ .++++++||+.+|+.+++.+| +.+
T Consensus 125 ------------------------k-------g~~K--------~~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av 162 (479)
T PRK08238 125 ------------------------K-------GAAK--------AAALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAI 162 (479)
T ss_pred ------------------------C-------CchH--------HHHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeE
Confidence 2 2222 122345555 467999999999999999999 666
Q ss_pred EEcCC
Q 017067 342 VMRSS 346 (378)
Q Consensus 342 ~v~~~ 346 (378)
.|+.+
T Consensus 163 ~Vn~~ 167 (479)
T PRK08238 163 VVGAS 167 (479)
T ss_pred EECCC
Confidence 66654
No 85
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.23 E-value=2.9e-11 Score=119.59 Aligned_cols=110 Identities=14% Similarity=0.173 Sum_probs=80.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCC---CC---------chHHHHHHHHHhCccccchheeechhhHHHhhhhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYG---KS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~---~~---------~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~ 250 (378)
..++||+.++|+.|+++|++++|+||.+ ++ .......+++.+|+. |+..+++....
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~---------- 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFP---------- 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcC----------
Confidence 4699999999999999999999999941 00 123455667777773 43322221000
Q ss_pred ccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHH
Q 017067 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 251 g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di 330 (378)
.+. +..+||+|++ |..+++.++++|++|+||||+.+|+
T Consensus 97 sd~----------------------------~~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 97 EDN----------------------------CSCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred ccc----------------------------CCCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHH
Confidence 000 0123666666 8899999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 017067 331 AGAQRIGMPCVVMRSS 346 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~ 346 (378)
++|+++||++|+++..
T Consensus 135 ~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 135 QLAENMGIKGIRYARE 150 (354)
T ss_pred HHHHHCCCeEEEEECC
Confidence 9999999999999543
No 86
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.21 E-value=4.8e-11 Score=104.89 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=82.7
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|++|+++|++++|+||. ....+..+++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~---~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGR---KAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEECC---CCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 789999999999999994 457888999999998877431
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|+. +..+++++|+++++|+||||+.+|+.+++.+|+. +.+.+... .
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~--~ 123 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP--L 123 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH--H
Confidence 222222 8899999999999999999999999999999997 66665532 2
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
..+.|++++++..+-+
T Consensus 124 ~~~~a~~i~~~~~~~g 139 (154)
T TIGR01670 124 LIPRADYVTRIAGGRG 139 (154)
T ss_pred HHHhCCEEecCCCCCc
Confidence 2344799998887633
No 87
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.19 E-value=1.5e-10 Score=113.53 Aligned_cols=72 Identities=10% Similarity=0.189 Sum_probs=56.0
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC--
Q 017067 290 DIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF-- 353 (378)
Q Consensus 290 ~i~kp~p~~~~~~~~a~~~a~~~l--------gv-----~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l-- 353 (378)
-++||+|.. |+.+++.+ ++ ++++++||||+. +||.+|+++||.+|+|.+|.....+.
T Consensus 230 ~~GKP~~~~-------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~ 302 (321)
T TIGR01456 230 TLGKPTKLT-------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLK 302 (321)
T ss_pred EcCCCChHH-------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCC
Confidence 457877775 77777776 43 457999999997 89999999999999999985544332
Q ss_pred -CCCcEEecCCCcchH
Q 017067 354 -PSANAVMDGFGGADL 368 (378)
Q Consensus 354 -~~ad~vi~~l~e~~~ 368 (378)
..++++++++.|+..
T Consensus 303 ~~~p~~vv~~l~e~~~ 318 (321)
T TIGR01456 303 ECKPTLIVNDVFDAVT 318 (321)
T ss_pred CCCCCEEECCHHHHHH
Confidence 237999999998743
No 88
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.18 E-value=1.8e-11 Score=106.82 Aligned_cols=94 Identities=21% Similarity=0.188 Sum_probs=76.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc-chheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~-f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
+.++||+.++|+.|+ ++++++|+||+ ....++.+++.+++..+ |+. +++.+++...
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~---~~~~~~~il~~l~~~~~~f~~-i~~~~d~~~~------------------ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAG---LRMYADPVLDLLDPKKYFGYR-RLFRDECVFV------------------ 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCC---cHHHHHHHHHHhCcCCCEeee-EEECcccccc------------------
Confidence 568999999999999 57999999995 46888999999999654 465 5555544321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
||+ |..+++++|++|++||+|||+.+|+.++.++|+.+
T Consensus 101 ------------------------KP~-----------------~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 ------------------------KGK-----------------YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred ------------------------CCe-----------------EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 443 56778999999999999999999999999999543
No 89
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.15 E-value=2.7e-10 Score=108.23 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=46.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++.+++++|++++++++|||+.||+.|++.+|+. +..++....-...|++|+++-.+-+
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~---vamgna~~~lk~~Ad~v~~~n~~dG 262 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLG---VAMGNADDAVKARADLVIGDNTTPS 262 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCce---EEecCchHHHHHhCCEEEecCCCCc
Confidence 8899999999999999999999999999999963 3334333222345899998776643
No 90
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.14 E-value=8.9e-11 Score=102.63 Aligned_cols=98 Identities=17% Similarity=0.291 Sum_probs=80.6
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
.+....-|.+++.+.+++++|+++.|+|| +.+.-+....+.+|+.-....
T Consensus 42 wd~~~~tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A--------------------------- 91 (175)
T COG2179 42 WDNPDATPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA--------------------------- 91 (175)
T ss_pred ccCCCCCHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc---------------------------
Confidence 34556789999999999999999999999 446777888888887754322
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGM 338 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~ 338 (378)
.||.+.- |..|+++++++|++|+||||.. +||.++..+||
T Consensus 92 -------------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 92 -------------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -------------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 1433332 9999999999999999999995 89999999999
Q ss_pred CEEEEcCC
Q 017067 339 PCVVMRSS 346 (378)
Q Consensus 339 ~~i~v~~~ 346 (378)
+||.|..-
T Consensus 133 ~tIlV~Pl 140 (175)
T COG2179 133 RTILVEPL 140 (175)
T ss_pred EEEEEEEe
Confidence 99998643
No 91
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.12 E-value=1.7e-10 Score=103.11 Aligned_cols=102 Identities=17% Similarity=0.091 Sum_probs=80.2
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
-|+.|+++|++++|+||. ....++..++.+|+.++|+..
T Consensus 42 ~~~~L~~~Gi~laIiT~k---~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 80 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSK---KSGAVRHRAEELKIKRFHEGI-------------------------------------- 80 (169)
T ss_pred HHHHHHHCCCEEEEEECC---CcHHHHHHHHHCCCcEEEecC--------------------------------------
Confidence 467888999999999994 468999999999999888531
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|+. |+.+++++++++++|++|||+.+|+.+++.+|+..+.-+.. ..
T Consensus 81 --------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~---~~ 129 (169)
T TIGR02726 81 --------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAV---AD 129 (169)
T ss_pred --------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCch---HH
Confidence 333333 99999999999999999999999999999999777664433 22
Q ss_pred CCCCCcEEecCCCc
Q 017067 352 EFPSANAVMDGFGG 365 (378)
Q Consensus 352 ~l~~ad~vi~~l~e 365 (378)
-...|++|+..-.+
T Consensus 130 lk~~A~~I~~~~~~ 143 (169)
T TIGR02726 130 VKEAAAYVTTARGG 143 (169)
T ss_pred HHHhCCEEcCCCCC
Confidence 22347888765444
No 92
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.09 E-value=1.5e-10 Score=98.60 Aligned_cols=89 Identities=7% Similarity=-0.056 Sum_probs=68.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC-------ccccchheeechhhHHHhhhhcccccccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg-------i~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~ 256 (378)
+++||+.++|+.|+++|++++|+||++ ....+...++.++ +.++|+..+ +++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~--~~~~~~~~l~~~~~~~~i~~l~~~f~~~~-~~~------------------ 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYND--DPHVAYELLKIFEDFGIIFPLAEYFDPLT-IGY------------------ 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCC--CHHHHHHHHHhccccccchhhHhhhhhhh-hcC------------------
Confidence 378999999999999999999999952 4677778888887 566665421 110
Q ss_pred CcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCHhHHHHHH
Q 017067 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 334 (378)
Q Consensus 257 ~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg--v~p~~~i~VGDs~~Di~aA~ 334 (378)
.+|.|++ |..+++++| +.|++|+||||+..|+...+
T Consensus 88 ----------------------------~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 88 ----------------------------WLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ----------------------------CCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 0222222 899999999 99999999999999987765
Q ss_pred H
Q 017067 335 R 335 (378)
Q Consensus 335 ~ 335 (378)
.
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
No 93
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.07 E-value=2.2e-09 Score=99.23 Aligned_cols=110 Identities=13% Similarity=0.039 Sum_probs=71.6
Q ss_pred CCCCCHHHHHH-HHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 184 PLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 184 ~~~pgv~~lL~-~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.++||+.++|+ .++++|++++|+|| +++..++.+.+..++....+ +++.+ ++. ..++.+.|.. +
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~--~i~t~-le~-~~gg~~~g~~---c----- 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN--LIASQ-IER-GNGGWVLPLR---C----- 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc--EEEEE-eEE-eCCceEcCcc---C-----
Confidence 58999999996 78889999999999 45788889988866643322 23322 111 0111111110 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
....| .....+.+|.+...+.+.|||.+|+.+...+|-+.++
T Consensus 159 ----------------------------------~g~~K----v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 159 ----------------------------------LGHEK----VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ----------------------------------CChHH----HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 00011 2333444465677899999999999999999988877
Q ss_pred EcCC
Q 017067 343 MRSS 346 (378)
Q Consensus 343 v~~~ 346 (378)
-+++
T Consensus 201 np~~ 204 (210)
T TIGR01545 201 SKRG 204 (210)
T ss_pred Ccch
Confidence 5544
No 94
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.07 E-value=5e-10 Score=99.78 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=69.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc----------ccchheeechhhHHHhhhhcccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLGK 252 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~----------~~f~~~iv~~~~~~~~~~~~~v~g~ 252 (378)
+.++|+|.++|+.|+++|+++++.|-. .....++..|+.+++. ++|+..-+..
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~--------------- 106 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP--------------- 106 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEEEESS---------------
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchhheec---------------
Confidence 569999999999999999999999954 3468999999999999 5554421111
Q ss_pred ccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHH
Q 017067 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 332 (378)
Q Consensus 253 ~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~a 332 (378)
+ ..... |+...+..|++.++++||+|-.+++..
T Consensus 107 ----g----------------------------------------sK~~H---f~~i~~~tgI~y~eMlFFDDe~~N~~~ 139 (169)
T PF12689_consen 107 ----G----------------------------------------SKTTH---FRRIHRKTGIPYEEMLFFDDESRNIEV 139 (169)
T ss_dssp ----S-----------------------------------------HHHH---HHHHHHHH---GGGEEEEES-HHHHHH
T ss_pred ----C----------------------------------------chHHH---HHHHHHhcCCChhHEEEecCchhccee
Confidence 0 11111 888899999999999999999999999
Q ss_pred HHHcCCCEEEEcCCCCC
Q 017067 333 AQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 333 A~~aG~~~i~v~~~~~~ 349 (378)
....|+.+|.|.+|.+.
T Consensus 140 v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 140 VSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHTTT-EEEE-SSS--H
T ss_pred eEecCcEEEEeCCCCCH
Confidence 99999999999987543
No 95
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.06 E-value=3.8e-10 Score=116.91 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=71.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCC---------chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~---------~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
++|||.+.|+.|+++|++++|+||...- ....+..+++.+|+. |+. +++.+..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdv-iia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQV-FIAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEE-EEeCCCC---------------
Confidence 6899999999999999999999997520 012467788888875 543 2322110
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCHhHHH
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg----v~p~~~i~VGDs~~Di~ 331 (378)
.+|||+|++ +..+++.++ +++++|+||||+..|++
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 145888887 899999984 89999999999998888
Q ss_pred HHHHcCC
Q 017067 332 GAQRIGM 338 (378)
Q Consensus 332 aA~~aG~ 338 (378)
++.++|.
T Consensus 299 ~g~~ag~ 305 (526)
T TIGR01663 299 NGKAAGK 305 (526)
T ss_pred HHHhcCC
Confidence 7776664
No 96
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.05 E-value=9.3e-10 Score=98.76 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCC---CCc---------hHHHHHHHHHhCccccchheeechhhHHHhhhhccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYG---KSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~---~~~---------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g 251 (378)
.+.||+.+.+..|++.|++++++||.+ +++ .......++..|. .-
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv-----------------------~i 87 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV-----------------------KI 87 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC-----------------------cc
Confidence 488999999999999999999999965 100 0112222222232 11
Q ss_pred cccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH
Q 017067 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 252 ~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~ 331 (378)
+.+..++. . -++.+.||||.|.+ |..+++++++++++.++|||...|++
T Consensus 88 d~i~~Cph----------~-------p~~~c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~Dlq 136 (181)
T COG0241 88 DGILYCPH----------H-------PEDNCDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTDLQ 136 (181)
T ss_pred ceEEECCC----------C-------CCCCCcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHHHH
Confidence 22222211 0 01225688999888 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCCC-CCcEEecCCCcch
Q 017067 332 GAQRIGMPCVVMRSSLTSRAEFP-SANAVMDGFGGAD 367 (378)
Q Consensus 332 aA~~aG~~~i~v~~~~~~~~~l~-~ad~vi~~l~e~~ 367 (378)
+|.++|+..+.+.++........ .++.+++++.++.
T Consensus 137 ~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 137 AAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 99999999888877654432222 3578888888776
No 97
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.00 E-value=6.3e-10 Score=100.54 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=75.4
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|+.|+++|++++|+||. ....+..+++.+|+..+|.. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~~---~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGR---KSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 567778899999999994 46888999999999877642 0
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
++ + ++ .++.+++++|++|++|+||||+.+|+.+++++|+.++ +.+. ...
T Consensus 95 --------------~~---------k--~~---~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~--~~~ 143 (183)
T PRK09484 95 --------------SN---------K--LI---AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADA--HPL 143 (183)
T ss_pred --------------Cc---------H--HH---HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCCh--hHH
Confidence 00 0 11 2899999999999999999999999999999999954 4322 112
Q ss_pred CCCCCcEEecC
Q 017067 352 EFPSANAVMDG 362 (378)
Q Consensus 352 ~l~~ad~vi~~ 362 (378)
....|+++++.
T Consensus 144 ~~~~a~~v~~~ 154 (183)
T PRK09484 144 LLPRADYVTRI 154 (183)
T ss_pred HHHhCCEEecC
Confidence 22347899974
No 98
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.97 E-value=5.1e-09 Score=98.32 Aligned_cols=41 Identities=12% Similarity=0.282 Sum_probs=38.2
Q ss_pred HHHHHHHcCCCCCcE-EEEeCCH-hHHHHHHHcCCCEEEEcCC
Q 017067 306 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~-i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (378)
|+.++++++++++++ +||||+. +||.+|+++||++++|.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999999999887 9999998 8999999999999999764
No 99
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.91 E-value=3.9e-09 Score=93.37 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCch-----------HHHHHHHHHhCccccchheeechhhHHHhhhhccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~-----------~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
..|+|.+.|++|.+.|+.++|+||.+.-.. .....+++.+++.-. ++.....
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~----~~~a~~~------------- 92 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQ----VYAAPHK------------- 92 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EE----EEECGCS-------------
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceE----EEecCCC-------------
Confidence 456899999999999999999999852111 222334444444311 1111000
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC----CCCcEEEEeCC---
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----PVRNCFLIAGS--- 326 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv----~p~~~i~VGDs--- 326 (378)
-.+|||.++| +..+++.+.. +.++++||||.
T Consensus 93 ----------------------------d~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 93 ----------------------------DPCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------------------STTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------------------CCCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 0267999988 8988988874 89999999996
Q ss_pred --------HhHHHHHHHcCCCEE
Q 017067 327 --------QSGVAGAQRIGMPCV 341 (378)
Q Consensus 327 --------~~Di~aA~~aG~~~i 341 (378)
..|.+-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 689999999998753
No 100
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.91 E-value=2.6e-08 Score=93.24 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=80.8
Q ss_pred CCCCCCCHHHHHHHH--HHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechh-hHHHh-hhhccccccccccC
Q 017067 182 DAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERS-LYGQFVLGKGISSG 257 (378)
Q Consensus 182 ~~~~~pgv~~lL~~L--k~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~-~~~~~-~~~~~v~g~~v~~~ 257 (378)
.+++.||+.++++.+ +..|+.+.|+|. +...+++.+++..|+...|.. |+++. ..... .+ .+...-...+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~~G~l--~v~pyh~h~C 142 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSE-IFTNPACFDADGRL--RVRPYHSHGC 142 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccce-EEeCCceecCCceE--EEeCccCCCC
Confidence 478999999999999 457999999999 457999999999999998876 56653 11110 00 0000000111
Q ss_pred cchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcC
Q 017067 258 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (378)
Q Consensus 258 ~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 337 (378)
.. =.+.+ =+-.++..|..-..+-|+.-++++||||+.||+=.+.+.+
T Consensus 143 ~~---------------------------C~~Nm------CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 143 SL---------------------------CPPNM------CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred Cc---------------------------CCCcc------chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 00 00001 0122322233333335788899999999999998888877
Q ss_pred CC-EEEEcCCCC
Q 017067 338 MP-CVVMRSSLT 348 (378)
Q Consensus 338 ~~-~i~v~~~~~ 348 (378)
-. .++.+.++.
T Consensus 190 ~~D~v~~R~~~~ 201 (234)
T PF06888_consen 190 PRDVVFPRKGYP 201 (234)
T ss_pred CCCEEecCCCCh
Confidence 54 555555543
No 101
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.84 E-value=1.2e-08 Score=94.53 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|++.+|+.++. ++....-...|++|..+..+-+
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam---~Na~~~vk~~a~~v~~~n~~~G 220 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV---ANADEELKEAADYVTEKSYGEG 220 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe---cCccHHHHHhcceEecCCCcCh
Confidence 38899999999999999999999999999999976543 3233333345899998776654
No 102
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.82 E-value=1.9e-09 Score=101.37 Aligned_cols=40 Identities=13% Similarity=0.312 Sum_probs=36.5
Q ss_pred HHHHHHHcCCC-CCcEEEEeCC-HhHHHHHHHcCCCEEEEcC
Q 017067 306 LRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 306 ~~~a~~~lgv~-p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~ 345 (378)
|+.+++++|+. +++|+||||+ .+||.+|+++||.+++|.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 99999999975 6799999999 6999999999999999864
No 103
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.81 E-value=7.7e-08 Score=91.86 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=40.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
..+++||+.++|+.|+++|++++++||........+...++.+|+...+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~ 164 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD 164 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC
Confidence 4668999999999999999999999997643345566788889987644
No 104
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.80 E-value=8.8e-09 Score=95.04 Aligned_cols=58 Identities=12% Similarity=0.005 Sum_probs=45.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
++.+++++|++++++++|||+.||+.|++.+|+.+++ ++....-...|++|..+-.+-
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam---~Na~~~~k~~A~~vt~~~~~~ 211 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV---ANAQPELKEWADYVTESPYGE 211 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc---CChhHHHHHhcCeecCCCCCC
Confidence 8889999999999999999999999999999965433 333333345589988766553
No 105
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.80 E-value=1.5e-08 Score=96.49 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=65.7
Q ss_pred HHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC---
Q 017067 278 AEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF--- 353 (378)
Q Consensus 278 ~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l--- 353 (378)
|.+.++.|+| .-++||++.. +....++++++|++|+||||+. +||.-++++|+++++|.++.+..++.
T Consensus 210 av~~~t~R~P-~v~GKP~~~m-------~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 210 AVKFATGRQP-IVLGKPSTFM-------FEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred HHHHHhcCCC-eecCCCCHHH-------HHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhc
Confidence 4577788888 5677776654 7778999999999999999997 59999999999999999998754322
Q ss_pred -----CCCcEEecCCCcch
Q 017067 354 -----PSANAVMDGFGGAD 367 (378)
Q Consensus 354 -----~~ad~vi~~l~e~~ 367 (378)
..+|+.++.++++-
T Consensus 282 ~~~~~~~PDyy~~~l~d~~ 300 (306)
T KOG2882|consen 282 QGDNKMVPDYYADSLGDLL 300 (306)
T ss_pred ccccCCCCchHHhhHHHHh
Confidence 12588888887764
No 106
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.79 E-value=9.5e-08 Score=87.19 Aligned_cols=52 Identities=21% Similarity=0.369 Sum_probs=45.7
Q ss_pred CCCCCCCHHHHHHHHHHCCC-cEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 182 DAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~-~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
.+|..||+.++|+.+++.|. .+.|+|.++ ..++..+++.+|+.++|.. |+++
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaN---sfFIe~~Lea~~~~d~F~~-IfTN 134 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDAN---SFFIEEILEAAGIHDLFSE-IFTN 134 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCc---hhHHHHHHHHccHHHHHHH-HhcC
Confidence 47899999999999999985 999999954 6999999999999999985 5554
No 107
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.77 E-value=1.5e-08 Score=99.39 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=75.0
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH----hCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~----lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
++||+.++|+.|+++|++++|+|| +....+..+++. +++.++|.... .+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~-~~----------------------- 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARS-IN----------------------- 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEE-Ee-----------------------
Confidence 588999999999999999999999 456888999998 88888887632 11
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
.||.|+. ++.+++.+|+.+++++||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 0333333 8999999999999999999999999999998754
No 108
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.76 E-value=2.1e-08 Score=105.02 Aligned_cols=113 Identities=15% Similarity=0.212 Sum_probs=86.6
Q ss_pred CCCCCCHHHHHHHHHHCCC-cEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~-~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+++||+.++|++|+++|+ +++++|| .....++.+++.+|++++|....
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~~--------------------------- 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAELL--------------------------- 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhccC---------------------------
Confidence 4689999999999999999 9999999 55799999999999988775310
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
|+++ ...+++++...++++||||+.||+.++++|| +
T Consensus 411 ----------------------------------p~~K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~---v 446 (536)
T TIGR01512 411 ----------------------------------PEDK-------LEIVKELREKYGPVAMVGDGINDAPALAAAD---V 446 (536)
T ss_pred ----------------------------------cHHH-------HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCC---E
Confidence 1111 1235555666789999999999999999999 4
Q ss_pred EEcCCC-CCCCCCCCCcEEe--cCCCcchHH
Q 017067 342 VMRSSL-TSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 342 ~v~~~~-~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
.+..+. ........||.++ +++.++...
T Consensus 447 gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred EEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 665553 3333445689999 888887643
No 109
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.75 E-value=2.6e-07 Score=88.41 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=49.6
Q ss_pred HHHHHHHcCCCC-CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCC-C-cEEe--cCCC--cchHHHHHHhhc
Q 017067 306 LRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPS-A-NAVM--DGFG--GADLTISKLRHS 376 (378)
Q Consensus 306 ~~~a~~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~-a-d~vi--~~l~--e~~~~~~~l~~~ 376 (378)
++.+++++|+++ +++++|||+.||+.|++.+|+.++.-+......+.+.. | +.|. ++-+ ++...+.+++.|
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~~ 272 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLSK 272 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHhh
Confidence 788899999999 99999999999999999999766654433233322334 3 4666 4433 454456665544
No 110
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.74 E-value=2.1e-08 Score=105.55 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=83.7
Q ss_pred CCCCCCHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G-~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+++||+.++|+.|+++| ++++++|| .....++.+++.+|+.++|... ..
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~--~p------------------------ 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAEL--LP------------------------ 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccC--CH------------------------
Confidence 568999999999999999 99999999 4568899999999998877541 01
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+.+. ..+++++..+++|+||||+.||+.++++|| +
T Consensus 434 -----------------------------------~~K~-------~~v~~l~~~~~~v~~vGDg~nD~~al~~A~---v 468 (556)
T TIGR01525 434 -----------------------------------EDKL-------AIVKELQEEGGVVAMVGDGINDAPALAAAD---V 468 (556)
T ss_pred -----------------------------------HHHH-------HHHHHHHHcCCEEEEEECChhHHHHHhhCC---E
Confidence 1111 123344446789999999999999999999 5
Q ss_pred EEcCCCCCCCCCCCCcEEec--CCCcchHH
Q 017067 342 VMRSSLTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 342 ~v~~~~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
.+..+...+.....||+++. ++..+...
T Consensus 469 gia~g~~~~~~~~~Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 469 GIAMGAGSDVAIEAADIVLLNDDLSSLPTA 498 (556)
T ss_pred eEEeCCCCHHHHHhCCEEEeCCCHHHHHHH
Confidence 55555433334456899998 45555433
No 111
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.74 E-value=7.8e-08 Score=86.09 Aligned_cols=41 Identities=22% Similarity=0.530 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
|++.++|+.++++|++++|+|+ ++...++.+++.+|+...+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~~~ 132 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDDDN 132 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSEGG
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceE
Confidence 5666999999999999999999 6789999999999998743
No 112
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.73 E-value=2e-09 Score=102.37 Aligned_cols=60 Identities=12% Similarity=0.005 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|.+.+|.. +..++....-...|++|..+..+-+
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~---vAm~NA~~~vK~~A~~vt~~n~~dG 259 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVG---VAMGNAIPSVKEVAQFVTKSNLEDG 259 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCce---EEecCccHHHHHhcCeeccCCCcch
Confidence 48999999999999999999999999999999964 3334444444556899998766543
No 113
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.71 E-value=2.6e-09 Score=101.98 Aligned_cols=58 Identities=9% Similarity=0.020 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcE--EecCCCc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANA--VMDGFGG 365 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~--vi~~l~e 365 (378)
+++..++++|++++++++|||+.||+.|.+.+|.. +..++...+-...|++ |+.+..+
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~---vAm~Na~~~vK~~A~~~~v~~~n~e 251 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG---FIMGNAMPQLRAELPHLPVIGHCRN 251 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc---eeccCChHHHHHhCCCCeecCCCcc
Confidence 48999999999999999999999999999999954 3334333333344664 7766555
No 114
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.71 E-value=6e-08 Score=95.57 Aligned_cols=130 Identities=11% Similarity=0.048 Sum_probs=85.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh-C-------ccccchheeechhhHHHhhhhcccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQFVLGKGI 254 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l-g-------i~~~f~~~iv~~~~~~~~~~~~~v~g~~v 254 (378)
+...||+.++|+.|+++|++++|+||+ ....++.+++.+ | +.++|+..+ +..... +.|+.-.....|
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS---~~~yt~~im~~l~g~~~~~~~w~~yFD~II-t~a~KP-~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNS---DYDYTDKGMKYLLGPFLGEHDWRDYFDVVI-VDARKP-GFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhhCCcccccchHhhCcEEE-eCCCCC-cccCCCCceEEE
Confidence 557999999999999999999999995 468899999996 7 899999744 432222 233321111111
Q ss_pred ccCcchhhhHHHHHHhhHHHHHHHHHHHhhhcccccc-CCCCcch-hHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHH
Q 017067 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPES-LDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVA 331 (378)
Q Consensus 255 ~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i-~kp~p~~-~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~ 331 (378)
....+ .+ |+.... .+| .+. ..+- .....+.+|+.++++++|||+. .||.
T Consensus 258 ~~~~g-~~-----------------------~~~~~~~l~~-g~vY~gGn---~~~~~~~l~~~~~~vlYvGD~i~~Di~ 309 (343)
T TIGR02244 258 DVETG-SL-----------------------KWGEVDGLEP-GKVYSGGS---LKQFHELLKWRGKEVLYFGDHIYGDLL 309 (343)
T ss_pred eCCCC-cc-----------------------cCCccccccC-CCeEeCCC---HHHHHHHHCCCCCcEEEECCcchHHHH
Confidence 11000 00 000000 000 000 0011 6677899999999999999996 6999
Q ss_pred HHH-HcCCCEEEEcC
Q 017067 332 GAQ-RIGMPCVVMRS 345 (378)
Q Consensus 332 aA~-~aG~~~i~v~~ 345 (378)
+++ .+||.+|+|-.
T Consensus 310 ~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 310 RSKKKRGWRTAAIIP 324 (343)
T ss_pred hhHHhcCcEEEEEch
Confidence 998 99999998764
No 115
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.68 E-value=6.3e-09 Score=98.78 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
|++..++++|++++++++|||+.||+.|.+.+| ..|..++..+.-...|++|..+-.+-+
T Consensus 193 al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag---~gvam~Na~~~~k~~A~~vt~~n~~~G 252 (264)
T COG0561 193 ALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAG---LGVAMGNADEELKELADYVTTSNDEDG 252 (264)
T ss_pred HHHHHHHHhCCCHHHeEEeCCccccHHHHHhcC---eeeeccCCCHHHHhhCCcccCCccchH
Confidence 488999999999999999999999999999999 445555554444455777767666654
No 116
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.66 E-value=3.8e-08 Score=94.11 Aligned_cols=61 Identities=8% Similarity=-0.064 Sum_probs=45.5
Q ss_pred HHHHHHHHcCC---CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC----CCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA----EFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv---~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~----~l~~ad~vi~~l~e~ 366 (378)
|++..++++|+ ++++++.|||+.||+.|.+.+|..+++= +...... ....++++.+..++-
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPE 258 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcH
Confidence 48999999999 9999999999999999999999544332 1211111 223478899888853
No 117
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.66 E-value=9.8e-07 Score=78.40 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=45.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFG 364 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~ 364 (378)
|...+...|++|.+.+|+.|.+.-+.||+.+||.++.+..+....-.-..-..++++|.
T Consensus 166 Y~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 166 YAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred HHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 89999999999999999999999999999999999987655332211112235666654
No 118
>PLN02887 hydrolase family protein
Probab=98.65 E-value=3.3e-08 Score=103.86 Aligned_cols=60 Identities=7% Similarity=-0.054 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|.+.+|. .|..++....-...|++|..+..+-+
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~---gVAMgNA~eeVK~~Ad~VT~sNdEDG 570 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL---GVALSNGAEKTKAVADVIGVSNDEDG 570 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC---EEEeCCCCHHHHHhCCEEeCCCCcCH
Confidence 4899999999999999999999999999999995 44445444444556899998766643
No 119
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.64 E-value=1.3e-07 Score=85.71 Aligned_cols=63 Identities=19% Similarity=0.266 Sum_probs=53.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHh-HHHHHHHcCCCEEEEcCCCCCC--CCCC--CCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSSLTSR--AEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~--~~l~--~ad~vi~~l~e~~~ 368 (378)
|+.+++.+|++|++++||||-.+ |+-+|.++||+.|.|.++--.. ++.+ .+|.++++|.|..+
T Consensus 187 Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 187 FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVD 254 (262)
T ss_pred HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHH
Confidence 89999999999999999999876 8999999999999999885443 2222 36899999988644
No 120
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.63 E-value=2.6e-07 Score=86.96 Aligned_cols=93 Identities=10% Similarity=0.168 Sum_probs=71.6
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..++||+.++|+.|+++|++++++||+.+. .......++.+|+.. .|+. +++++++...
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~~~L~~~gl~~~~~~~-Ii~s~~~~~~------------------ 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLHKTLKSLGINADLPEM-IISSGEIAVQ------------------ 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHHHHHHHCCCCccccce-EEccHHHHHH------------------
Confidence 458999999999999999999999997642 222236889999987 8876 5555443221
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
.+..++++++++|++|++|||+..|++....+|.
T Consensus 83 -------------------------------------------~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 -------------------------------------------MILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -------------------------------------------HHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 1566678889999999999999999987766554
No 121
>PTZ00445 p36-lilke protein; Provisional
Probab=98.63 E-value=1.2e-07 Score=86.62 Aligned_cols=40 Identities=8% Similarity=0.061 Sum_probs=38.7
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 307 ~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
+.++++.|++|++|+||+|...++++|++.||+++.+.++
T Consensus 168 e~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 168 KQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred HHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 9999999999999999999999999999999999999866
No 122
>PRK10976 putative hydrolase; Provisional
Probab=98.60 E-value=1.1e-08 Score=97.05 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc--EEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN--AVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad--~vi~~l~e~ 366 (378)
+++..++++|++++++++|||+.||+.|.+.+|...+. ++....-...|+ +|+.+..|-
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm---~NA~~~vK~~A~~~~v~~~n~ed 254 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM---GNAHQRLKDLLPELEVIGSNADD 254 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee---cCCcHHHHHhCCCCeecccCchH
Confidence 48999999999999999999999999999999965444 333333333455 777766553
No 123
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.60 E-value=1.3e-07 Score=87.00 Aligned_cols=58 Identities=14% Similarity=0.039 Sum_probs=45.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
++.+++++|++++++++|||+.||+.|++.+|+.++. ++..+.-...|++|.++-.+-
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~~ 209 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV---ANADDQLKEIADYVTSNPYGE 209 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc---CCccHHHHHhCCEEcCCCCCc
Confidence 8899999999999999999999999999999966444 333333334489998765554
No 124
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.59 E-value=1e-07 Score=100.40 Aligned_cols=112 Identities=13% Similarity=0.246 Sum_probs=80.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|++|+++|++++++|| .....++.+.+.+|++ +|...
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~-~~~~~----------------------------- 450 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN-VRAEV----------------------------- 450 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc-EEccC-----------------------------
Confidence 45899999999999999999999999 4578999999999995 22110
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+ |+++.+. +++++.++++|+||||+.||+.++++||+ .
T Consensus 451 -----------------------~---------p~~K~~~-------v~~l~~~~~~v~~VGDg~nD~~al~~A~v---g 488 (562)
T TIGR01511 451 -----------------------L---------PDDKAAL-------IKELQEKGRVVAMVGDGINDAPALAQADV---G 488 (562)
T ss_pred -----------------------C---------hHHHHHH-------HHHHHHcCCEEEEEeCCCccHHHHhhCCE---E
Confidence 0 1111111 33333367899999999999999999995 4
Q ss_pred EcCCCCCCCCCCCCcEEec--CCCcchHH
Q 017067 343 MRSSLTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
+..+...+.....||+++. ++.++...
T Consensus 489 ia~g~g~~~a~~~Advvl~~~~l~~l~~~ 517 (562)
T TIGR01511 489 IAIGAGTDVAIEAADVVLMRNDLNDVATA 517 (562)
T ss_pred EEeCCcCHHHHhhCCEEEeCCCHHHHHHH
Confidence 4445444444556899984 77666544
No 125
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=1.3e-06 Score=77.79 Aligned_cols=55 Identities=33% Similarity=0.526 Sum_probs=44.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC-ccccchheeechhh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEE 239 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg-i~~~f~~~iv~~~~ 239 (378)
.+.+.||.+++++.+++++++++|+|+ +...++..+++..+ -++...+.+++++.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~ 126 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNND 126 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCc
Confidence 467999999999999999999999999 66799999998755 45555565666653
No 126
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.47 E-value=1.2e-07 Score=87.61 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 7888999999999999999999999999999976653
No 127
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.46 E-value=6.7e-08 Score=91.32 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++.+++++|++++++++|||+.||+.|++.+|+.+++- +....-...|++++++..+-
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~---na~~~~k~~a~~~~~~n~~d 250 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG---NADEELKALADYVTDSNNED 250 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec---CchHHHHHhCCEEecCCCCc
Confidence 489999999999999999999999999999999875552 22223334588998876654
No 128
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.42 E-value=5.9e-07 Score=98.92 Aligned_cols=114 Identities=12% Similarity=0.171 Sum_probs=84.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++||+.+.|++|+++|++++++|+ .....++.+.+.+|+.++|... .
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~--~-------------------------- 697 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGV--L-------------------------- 697 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCC--C--------------------------
Confidence 36899999999999999999999999 4468888999999998765431 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
|+.+ ..+++.++..+++++||||+.||+.++++||+ .
T Consensus 698 ---------------------------------p~~K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agv---g 734 (834)
T PRK10671 698 ---------------------------------PDGK-------AEAIKRLQSQGRQVAMVGDGINDAPALAQADV---G 734 (834)
T ss_pred ---------------------------------HHHH-------HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCe---e
Confidence 1111 12355666778999999999999999999996 5
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcchHHH
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGADLTI 370 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~~~~ 370 (378)
+..+......+..||.++ +++.++...+
T Consensus 735 ia~g~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 735 IAMGGGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred EEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 555555555556666544 6677665544
No 129
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.32 E-value=1e-06 Score=84.54 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
||+.++|++|+++|++++|+||+. ...+...++.+|+..+|+. +++++++.+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~---Re~v~~~L~~lGLd~YFdv-IIs~Gdv~~ 200 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGD---RDHVVESMRKVKLDRYFDI-IISGGHKAE 200 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHHcCCCcccCE-EEECCcccc
Confidence 788999999999999999999954 5788899999999999987 555555544
No 130
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.31 E-value=1.2e-06 Score=96.92 Aligned_cols=139 Identities=21% Similarity=0.281 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.|+.|+++|+++.++|+ .....+..+.+.+|+...++. ++++++..... ++++
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~-~v~g~~l~~~~--------------~~~l- 588 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQ-SVSGEKLDAMD--------------DQQL- 588 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCc-eeEhHHhHhCC--------------HHHH-
Confidence 6899999999999999999999999 557899999999999876654 34444443210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
.++.+++.. +..+.|+.+-.+ -.++++. .+.+.|+||+.||+.|.++|+ |++
T Consensus 589 -----------~~~~~~~~V-------far~~P~~K~~i----v~~lq~~---g~~v~mvGDGvND~pAl~~Ad---VGi 640 (884)
T TIGR01522 589 -----------SQIVPKVAV-------FARASPEHKMKI----VKALQKR---GDVVAMTGDGVNDAPALKLAD---IGV 640 (884)
T ss_pred -----------HHHhhcCeE-------EEECCHHHHHHH----HHHHHHC---CCEEEEECCCcccHHHHHhCC---eeE
Confidence 001111000 111223333333 2233443 478999999999999999999 566
Q ss_pred cCCC-CCCCCCCCCcEEe--cCCCcchHH
Q 017067 344 RSSL-TSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 344 ~~~~-~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
..+. ..+.....||+++ ++|..+...
T Consensus 641 a~g~~g~~va~~aaDivl~dd~~~~i~~~ 669 (884)
T TIGR01522 641 AMGQTGTDVAKEAADMILTDDDFATILSA 669 (884)
T ss_pred ecCCCcCHHHHHhcCEEEcCCCHHHHHHH
Confidence 6653 2333335689999 668877554
No 131
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.29 E-value=2.4e-06 Score=77.53 Aligned_cols=47 Identities=11% Similarity=0.221 Sum_probs=34.8
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHH
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTI 370 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~ 370 (378)
++|+|++.++..+...|+++|++..+++.... --..+.+..|+...+
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei~~~i 185 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEIEDLI 185 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSHHHHH
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHHHHHH
Confidence 79999999999999999999999998777553 457888888875544
No 132
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.26 E-value=3.6e-07 Score=81.03 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=76.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
+..+||+.++|+.|.+. +.++|.|++ ....++.+++.+++.. +|+..++..++...
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~---~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTAS---LEEYADPVLDILDRGGKVISRRLYRESCVFT------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCC---cHHHHHHHHHHHCcCCCEEeEEEEccccEEe-------------------
Confidence 45899999999999988 999999994 5789999999999876 77764432221100
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
||. |.+.+..+|.++++||+|||++.++.++.++|+++.
T Consensus 98 ------------------------~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 ------------------------NGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ------------------------CCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 111 345578889999999999999999999999997766
Q ss_pred EEc
Q 017067 342 VMR 344 (378)
Q Consensus 342 ~v~ 344 (378)
...
T Consensus 137 ~f~ 139 (162)
T TIGR02251 137 SWF 139 (162)
T ss_pred CCC
Confidence 554
No 133
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.23 E-value=3.4e-06 Score=91.69 Aligned_cols=108 Identities=15% Similarity=0.202 Sum_probs=77.7
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.|++|+++|++++++|+ .....++.+.+.+|+..++.. .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~~~~~---~--------------------------- 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDFRAGL---L--------------------------- 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCeecCC---C---------------------------
Confidence 6899999999999999999999999 457999999999999643321 0
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+..+ .++++ .+.+++||||+.||..++++|+ |.+
T Consensus 615 --------------------------------p~~K~~~-------v~~l~-~~~~v~mvGDgiNDapAl~~A~---vgi 651 (741)
T PRK11033 615 --------------------------------PEDKVKA-------VTELN-QHAPLAMVGDGINDAPAMKAAS---IGI 651 (741)
T ss_pred --------------------------------HHHHHHH-------HHHHh-cCCCEEEEECCHHhHHHHHhCC---eeE
Confidence 1111111 22333 3468999999999999999999 555
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcch
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGAD 367 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~ 367 (378)
..+.......+.||.++ +++.++.
T Consensus 652 a~g~~~~~a~~~adivl~~~~l~~l~ 677 (741)
T PRK11033 652 AMGSGTDVALETADAALTHNRLRGLA 677 (741)
T ss_pred EecCCCHHHHHhCCEEEecCCHHHHH
Confidence 55544544455678766 4555554
No 134
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.13 E-value=1.1e-05 Score=75.64 Aligned_cols=50 Identities=22% Similarity=0.301 Sum_probs=41.1
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
....++.||+.+|++.++++|+.|.++||............|...|+...
T Consensus 111 ~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~ 160 (229)
T PF03767_consen 111 SGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW 160 (229)
T ss_dssp CTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB
T ss_pred cccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc
Confidence 33457899999999999999999999999776556677788888896543
No 135
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.10 E-value=1.8e-05 Score=70.44 Aligned_cols=96 Identities=13% Similarity=0.186 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHCCCc--EEEEeCCCCC----chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCc
Q 017067 185 LRPGVEDFVDDAYNEGIP--LIVLTAYGKS----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~--v~ivTn~~~~----~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~ 258 (378)
+.|.+.+.++++++.+.. +.|+||+.-. ....++.+-+.+|+.-+...
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~-------------------------- 113 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHR-------------------------- 113 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeC--------------------------
Confidence 556778899999998764 9999996300 13556667777775421100
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC-----CCCcEEEEeCCH-hHHHH
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-----PVRNCFLIAGSQ-SGVAG 332 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv-----~p~~~i~VGDs~-~Di~a 332 (378)
..|| .. +..++++++. .|+++++|||.. +||.+
T Consensus 114 -------------------------~kKP---------~~-------~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 114 -------------------------AKKP---------GC-------FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -------------------------CCCC---------cc-------HHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 0143 11 4455556543 599999999995 79999
Q ss_pred HHHcCCCEEEEcCCC
Q 017067 333 AQRIGMPCVVMRSSL 347 (378)
Q Consensus 333 A~~aG~~~i~v~~~~ 347 (378)
|...|+.+|++.+|.
T Consensus 153 gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 153 GNRMGSYTILVTDGV 167 (168)
T ss_pred hhccCceEEEEecCc
Confidence 999999999999874
No 136
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.05 E-value=3.4e-06 Score=78.68 Aligned_cols=37 Identities=5% Similarity=0.047 Sum_probs=31.6
Q ss_pred HHHHHHHcCC--CCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lgv--~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.+..++.+++ .+.+|++|||+.||+.|.+.+|+.+++
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 6777788866 677999999999999999999987653
No 137
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.02 E-value=1.7e-05 Score=66.95 Aligned_cols=120 Identities=8% Similarity=0.093 Sum_probs=87.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-.+++.|.+.|++|++. +.++|.|+-. ........+-.|+...- +....+
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr---~gsl~~lae~~gi~~~r---v~a~a~----------------------- 78 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDR---KGSLVQLAEFVGIPVER---VFAGAD----------------------- 78 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCc---chHHHHHHHHcCCceee---eecccC-----------------------
Confidence 45899999999999999 9999999843 45666777777764322 111111
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
++.. ...++.++-+-+.|+||||+.||+.+.++|.+..+.
T Consensus 79 ---------------------------------~e~K-------~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 79 ---------------------------------PEMK-------AKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ---------------------------------HHHH-------HHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 1111 223556665668999999999999999999999888
Q ss_pred EcCCCCCCCCCCCCcEEecCCCcchHHHHH
Q 017067 343 MRSSLTSRAEFPSANAVMDGFGGADLTISK 372 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~ 372 (378)
+......+.-+..||.|+.+..|+-+.+.+
T Consensus 119 iq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 119 IQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred eccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 887656666677899999999998665443
No 138
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.98 E-value=3.4e-05 Score=82.60 Aligned_cols=111 Identities=11% Similarity=0.089 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.+++||+.|+++.++|+ .....+..+.+.+|+.++|... .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~A~~--~--------------------------- 488 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFVAEC--K--------------------------- 488 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEEcCC--C---------------------------
Confidence 6899999999999999999999999 5578999999999998765331 1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+-. +-..+++-| +-+.|+||+.||..+.++|. |++
T Consensus 489 --------------------------------PedK~~----iV~~lQ~~G---~~VaMtGDGvNDAPALa~AD---VGI 526 (673)
T PRK14010 489 --------------------------------PEDKIN----VIREEQAKG---HIVAMTGDGTNDAPALAEAN---VGL 526 (673)
T ss_pred --------------------------------HHHHHH----HHHHHHhCC---CEEEEECCChhhHHHHHhCC---EEE
Confidence 111111 222333333 56889999999999999999 677
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADL 368 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~ 368 (378)
..+...+...+.||+|+ ++|..+..
T Consensus 527 AMgsGTdvAkeAADiVLldd~ls~Iv~ 553 (673)
T PRK14010 527 AMNSGTMSAKEAANLIDLDSNPTKLME 553 (673)
T ss_pred EeCCCCHHHHHhCCEEEcCCCHHHHHH
Confidence 76655555666789988 44555433
No 139
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.92 E-value=0.00066 Score=70.52 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=63.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechh-hH-HHhhhhccccccccccCcchh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~-~~-~~~~~~~~v~g~~v~~~~~~~ 261 (378)
+.|.+.+. ++++|. .+|+|. +++..++.+.+. +|++.. ++.+ ++ ..+.|++.+.|.+.-.|.
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~Ge--- 175 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVGD--- 175 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCccH---
Confidence 45555554 456774 499999 567899999976 898863 3332 22 234455554443211110
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+. ...+.+.+|.+... +..|||.+|..+...++-..+
T Consensus 176 ---------------------------------------~K---v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 176 ---------------------------------------HK---RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred ---------------------------------------HH---HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 00 23333556644334 899999999999999997766
Q ss_pred EEcCC
Q 017067 342 VMRSS 346 (378)
Q Consensus 342 ~v~~~ 346 (378)
+-.+.
T Consensus 213 V~~~~ 217 (497)
T PLN02177 213 VPRTK 217 (497)
T ss_pred eCCCC
Confidence 65533
No 140
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.92 E-value=2.3e-05 Score=68.30 Aligned_cols=101 Identities=14% Similarity=0.181 Sum_probs=76.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
-|+.|.+.|++++|+|+. ..+.++.-.+.||+.+++... ++
T Consensus 43 Gik~l~~~Gi~vAIITGr---~s~ive~Ra~~LGI~~~~qG~----~d-------------------------------- 83 (170)
T COG1778 43 GIKLLLKSGIKVAIITGR---DSPIVEKRAKDLGIKHLYQGI----SD-------------------------------- 83 (170)
T ss_pred HHHHHHHcCCeEEEEeCC---CCHHHHHHHHHcCCceeeech----Hh--------------------------------
Confidence 467788889999999994 468999999999999988652 00
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
..++|...++++++.+++|.||||-.+|+.+.+.+|+++..-... .
T Consensus 84 ------------------------------K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh----~ 129 (170)
T COG1778 84 ------------------------------KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAH----P 129 (170)
T ss_pred ------------------------------HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccC----H
Confidence 013489999999999999999999999999999999886653221 2
Q ss_pred CC-CCCcEEecCCCc
Q 017067 352 EF-PSANAVMDGFGG 365 (378)
Q Consensus 352 ~l-~~ad~vi~~l~e 365 (378)
.+ +.+++|...=++
T Consensus 130 ~v~~~a~~Vt~~~GG 144 (170)
T COG1778 130 LLKQRADYVTSKKGG 144 (170)
T ss_pred HHHHhhHhhhhccCc
Confidence 22 235666554443
No 141
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.91 E-value=4.4e-05 Score=84.99 Aligned_cols=138 Identities=12% Similarity=0.225 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch---heeechhhHHHhhhhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~---~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+...-. ...+.+.+...- .++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~--------------~~~ 599 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM--------------GPA 599 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC--------------CHH
Confidence 6899999999999999999999999 44688899999999854211 012222222110 000
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
+......++.. +..-.|+.+-.+ .+.++-..+.+.|+||+.||+.|.+.|++
T Consensus 600 ------------~~~~~~~~~~v-------~ar~~P~~K~~i-------V~~lq~~g~~va~iGDG~ND~~alk~AdV-- 651 (917)
T TIGR01116 600 ------------KQRAACRSAVL-------FSRVEPSHKSEL-------VELLQEQGEIVAMTGDGVNDAPALKKADI-- 651 (917)
T ss_pred ------------HHHHhhhcCeE-------EEecCHHHHHHH-------HHHHHhcCCeEEEecCCcchHHHHHhCCe--
Confidence 00000000000 000112222222 33344446788899999999999999995
Q ss_pred EEEcCCCCCCCCCCCCcEEecC--CCcch
Q 017067 341 VVMRSSLTSRAEFPSANAVMDG--FGGAD 367 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi~~--l~e~~ 367 (378)
++..+...+.....||+|+.+ |..+.
T Consensus 652 -Gia~g~g~~~ak~aAD~vl~dd~f~~i~ 679 (917)
T TIGR01116 652 -GIAMGSGTEVAKEASDMVLADDNFATIV 679 (917)
T ss_pred -eEECCCCcHHHHHhcCeEEccCCHHHHH
Confidence 555443334444568999977 55543
No 142
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.90 E-value=2.7e-05 Score=75.05 Aligned_cols=48 Identities=21% Similarity=0.188 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
|++.++|++|+++|++++|+||+ ....+...++.+|+..+|+..+.++
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg---~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYG---NREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHcCCCccccEEEECC
Confidence 67889999999999999999994 4588899999999999998744333
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.89 E-value=0.00013 Score=68.12 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=38.7
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
....++.|++.++++.|+++|+++.++||........+...|...|+..+
T Consensus 116 ~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 116 KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 34568999999999999999999999999653223336677777887654
No 144
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.89 E-value=0.00013 Score=77.49 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCCCCcEEEE--eCCHhHHHHHHHcCCCEEEEcCCCCCCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVVMRSSLTSRAEF 353 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~V--GDs~~Di~aA~~aG~~~i~v~~~~~~~~~l 353 (378)
|++..++.+|++.++++.| ||+.||+.|.+.+|..++. ..+......+
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM-~~~~~~~~~l 666 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV-QRPGNKWHKM 666 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE-cCCCCCCCcc
Confidence 5899999999999999999 9999999999999986555 4444433333
No 145
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.86 E-value=0.00022 Score=62.91 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=28.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 223 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~ 223 (378)
..|++.++++.++++|++++++|+...+.....+..++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 458899999999999999999999542222222466665
No 146
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.84 E-value=6.9e-05 Score=80.64 Aligned_cols=113 Identities=16% Similarity=0.241 Sum_probs=83.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++|+..+.|++|+++|+++.++|+ .....++.+.+.+|+++++... .
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~Ael--l-------------------------- 584 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVRAEL--L-------------------------- 584 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhheccC--C--------------------------
Confidence 35899999999999999999999999 5579999999999998776441 1
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
|+.+-++ .+++.-.-..+.||||+.||-.+...|. |+
T Consensus 585 ---------------------------------PedK~~~-------V~~l~~~g~~VamVGDGINDAPALA~Ad---VG 621 (713)
T COG2217 585 ---------------------------------PEDKAEI-------VRELQAEGRKVAMVGDGINDAPALAAAD---VG 621 (713)
T ss_pred ---------------------------------cHHHHHH-------HHHHHhcCCEEEEEeCCchhHHHHhhcC---ee
Confidence 1111111 2222222368999999999999999998 77
Q ss_pred EcCCCCCCCCCCCCcEEec--CCCcchHH
Q 017067 343 MRSSLTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
+..+...+-..+.||.|+- +|..+...
T Consensus 622 iAmG~GtDvA~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 622 IAMGSGTDVAIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred EeecCCcHHHHHhCCEEEecCCHHHHHHH
Confidence 7777666667778887664 46665543
No 147
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.82 E-value=8e-05 Score=79.93 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.+++|++.|+++.++|+ .....+..+.+.+|+++++... .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~A~~--~--------------------------- 492 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFLAEA--T--------------------------- 492 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEEccC--C---------------------------
Confidence 5799999999999999999999999 5579999999999998755321 1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+-. +-..+++-| +-+.|+||+.||..|.++|. |++
T Consensus 493 --------------------------------PedK~~----iV~~lQ~~G---~~VaMtGDGvNDAPALa~AD---VGI 530 (679)
T PRK01122 493 --------------------------------PEDKLA----LIRQEQAEG---RLVAMTGDGTNDAPALAQAD---VGV 530 (679)
T ss_pred --------------------------------HHHHHH----HHHHHHHcC---CeEEEECCCcchHHHHHhCC---EeE
Confidence 111111 222333333 45889999999999999999 666
Q ss_pred cCCCCCCCCCCCCcEEec--CCCcchH
Q 017067 344 RSSLTSRAEFPSANAVMD--GFGGADL 368 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~--~l~e~~~ 368 (378)
..+...+...+.||+|+- +|..+..
T Consensus 531 AMgsGTdvAkeAADiVLldd~~s~Iv~ 557 (679)
T PRK01122 531 AMNSGTQAAKEAGNMVDLDSNPTKLIE 557 (679)
T ss_pred EeCCCCHHHHHhCCEEEeCCCHHHHHH
Confidence 666555555667898874 4544443
No 148
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.79 E-value=0.00022 Score=68.03 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=38.6
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
....++.|++.++.+.++++|+++.++||............|.+.|+..
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 3457899999999999999999999999965333455666677777754
No 149
>PLN02382 probable sucrose-phosphatase
Probab=97.75 E-value=7e-05 Score=76.15 Aligned_cols=43 Identities=14% Similarity=-0.028 Sum_probs=36.9
Q ss_pred HHHHHHHHc---CCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCC
Q 017067 305 ALRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 305 a~~~a~~~l---gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 347 (378)
|++..++++ |++++++++|||+.||+.|.+.+|...|.+.+..
T Consensus 179 Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 179 ALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred HHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 378888998 9999999999999999999999997666665553
No 150
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.73 E-value=0.00012 Score=78.45 Aligned_cols=105 Identities=13% Similarity=0.154 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.+++|+++|+++.++|+ .....+..+.+.+|+++++... .
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~a~~--~--------------------------- 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFIAEA--T--------------------------- 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEEcCC--C---------------------------
Confidence 6899999999999999999999999 5578999999999998755320 0
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+-.+ ++. ++.- ...+.|+||+.||..+.++|++ .+
T Consensus 494 --------------------------------PedK~~~---v~~-lq~~---g~~VamvGDG~NDapAL~~Adv---Gi 531 (675)
T TIGR01497 494 --------------------------------PEDKIAL---IRQ-EQAE---GKLVAMTGDGTNDAPALAQADV---GV 531 (675)
T ss_pred --------------------------------HHHHHHH---HHH-HHHc---CCeEEEECCCcchHHHHHhCCE---eE
Confidence 1111111 222 2222 3469999999999999999994 44
Q ss_pred cCCCCCCCCCCCCcEEecC
Q 017067 344 RSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~~ 362 (378)
..+...+...+.+|+|+-+
T Consensus 532 Am~~gt~~akeaadivLld 550 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLD 550 (675)
T ss_pred EeCCCCHHHHHhCCEEECC
Confidence 4443344444557887743
No 151
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.70 E-value=0.00015 Score=80.71 Aligned_cols=137 Identities=13% Similarity=0.149 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.. ..++++.+...- -++++.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~~---~~vi~G~el~~~--------------~~~el~ 609 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLEP---GEPLLGTEIEAM--------------DDAALA 609 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC---CCccchHhhhhC--------------CHHHHH
Confidence 6899999999999999999999999 55789999999999952 124444444320 000111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
+ +.+++ . -+..-.|+.+-.+| .++++.| +-+.|+||+.||..|.++|. |++
T Consensus 610 ~------------~v~~~------~-VfAr~sPe~K~~iV----~~Lq~~G---~vVamtGDGvNDaPALk~AD---VGI 660 (903)
T PRK15122 610 R------------EVEER------T-VFAKLTPLQKSRVL----KALQANG---HTVGFLGDGINDAPALRDAD---VGI 660 (903)
T ss_pred H------------HhhhC------C-EEEEeCHHHHHHHH----HHHHhCC---CEEEEECCCchhHHHHHhCC---EEE
Confidence 0 00000 0 00001133333333 3334444 56899999999999999999 555
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchHH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
..+...+-..+.||.|+ ++|..+...
T Consensus 661 Amg~gtdvAkeaADiVLldd~f~~Iv~a 688 (903)
T PRK15122 661 SVDSGADIAKESADIILLEKSLMVLEEG 688 (903)
T ss_pred EeCcccHHHHHhcCEEEecCChHHHHHH
Confidence 55544444456689988 556655443
No 152
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.69 E-value=0.0002 Score=68.01 Aligned_cols=117 Identities=16% Similarity=0.258 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc---chheeec-------hhhHHHhhhhccccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI---SKIKIVG-------NEEVERSLYGQFVLGKG 253 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~---f~~~iv~-------~~~~~~~~~~~~v~g~~ 253 (378)
..-+.+.++|..|+++|+++..+|...........+.|+.+|++-- |...... ........++++....+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 3678999999999999999999999775556666677778887421 1111000 00001111122222111
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH--
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA-- 331 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~-- 331 (378)
..+| .++...+.+.|..|+.+|||+|+..++.
T Consensus 161 ~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 161 QDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLKSV 194 (252)
T ss_pred CccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHHHH
Confidence 1111 1288899999999999999999998774
Q ss_pred --HHHHcCCCEEEEcCC
Q 017067 332 --GAQRIGMPCVVMRSS 346 (378)
Q Consensus 332 --aA~~aG~~~i~v~~~ 346 (378)
+++..|+..+++.-.
T Consensus 195 ~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 195 EKACKKSGIDFIGFHYT 211 (252)
T ss_pred HHHHhhCCCcEEEEEEc
Confidence 455678888877543
No 153
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.68 E-value=8.5e-05 Score=62.85 Aligned_cols=49 Identities=18% Similarity=0.082 Sum_probs=42.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhee
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~i 234 (378)
+.++|.|.+++..+|+.|+.+..+|= +....+-..+..+++..+|...+
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 56899999999999999998888886 56778888999999999999854
No 154
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.67 E-value=0.00017 Score=79.93 Aligned_cols=132 Identities=10% Similarity=0.181 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh---hhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL---YGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~---~~~~v~g~~v~~~~~~ 260 (378)
+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+..- .++.+.+..... +...+....+..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~~~---~v~~g~~l~~~~~~el~~~~~~~~vfA---- 584 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGIDAN---DFLLGADIEELSDEELARELRKYHIFA---- 584 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC---CeeecHhhhhCCHHHHHHHhhhCeEEE----
Confidence 6899999999999999999999999 557889999999999631 234443332100 000000000100
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.-.|+.+-.+| .++++.| +.+.|+||+.||..|.+.|.
T Consensus 585 --------------------------------r~~Pe~K~~iV----~~lq~~G---~vVam~GDGvNDapALk~Ad--- 622 (867)
T TIGR01524 585 --------------------------------RLTPMQKSRII----GLLKKAG---HTVGFLGDGINDAPALRKAD--- 622 (867)
T ss_pred --------------------------------ECCHHHHHHHH----HHHHhCC---CEEEEECCCcccHHHHHhCC---
Confidence 01133333332 3344444 46889999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEe--cCCCcch
Q 017067 341 VVMRSSLTSRAEFPSANAVM--DGFGGAD 367 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi--~~l~e~~ 367 (378)
|++..+...+-..+.||.|+ ++|..+.
T Consensus 623 VGIAmg~gtdvAk~aADiVLldd~~~~I~ 651 (867)
T TIGR01524 623 VGISVDTAADIAKEASDIILLEKSLMVLE 651 (867)
T ss_pred EEEEeCCccHHHHHhCCEEEecCChHHHH
Confidence 55555544444456689888 4454443
No 155
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.65 E-value=0.00019 Score=79.67 Aligned_cols=136 Identities=13% Similarity=0.184 Sum_probs=85.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.. ..++++++.+.- .++++
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~---~~v~~G~el~~l--------------~~~el 608 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLDA---GEVLIGSDIETL--------------SDDEL 608 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCc---cCceeHHHHHhC--------------CHHHH
Confidence 36899999999999999999999999 55789999999999952 124555554321 01111
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.+ +.+++- -+..-.|+.+-.+|. ++++.| .-+.|+||+.||..|.++|. |+
T Consensus 609 ~~------------~~~~~~-------VfAr~sPe~K~~IV~----~Lq~~G---~vVam~GDGvNDaPALk~AD---VG 659 (902)
T PRK10517 609 AN------------LAERTT-------LFARLTPMHKERIVT----LLKREG---HVVGFMGDGINDAPALRAAD---IG 659 (902)
T ss_pred HH------------HHhhCc-------EEEEcCHHHHHHHHH----HHHHCC---CEEEEECCCcchHHHHHhCC---EE
Confidence 10 001000 000112333334433 334444 56889999999999999999 56
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcch
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGAD 367 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~ 367 (378)
+..+...+-..+.||.|+ ++|..+.
T Consensus 660 IAmg~gtdvAkeaADiVLldd~~~~I~ 686 (902)
T PRK10517 660 ISVDGAVDIAREAADIILLEKSLMVLE 686 (902)
T ss_pred EEeCCcCHHHHHhCCEEEecCChHHHH
Confidence 655544444556689988 4555543
No 156
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.51 E-value=0.0036 Score=57.93 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=48.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC-CCCC-CcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA-EFPS-ANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~l~~-ad~vi~~l~e~~ 367 (378)
|....+.+|.++.|.+|+-|-..-..+|+.+|+.+.++..|..... +-.. .=.++.+|..+.
T Consensus 186 y~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~ 249 (254)
T KOG2630|consen 186 YKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE 249 (254)
T ss_pred HHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence 8999999999999999999999999999999999888766644332 2111 235777777653
No 157
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.46 E-value=0.00025 Score=68.43 Aligned_cols=43 Identities=12% Similarity=0.028 Sum_probs=30.3
Q ss_pred HHHHHHHcCC--CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC
Q 017067 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv--~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
.+...+.+.- .+-.+|.+|||+||+.|.+.+...+|+ .++...
T Consensus 213 ~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi-~~~~~~ 257 (302)
T PRK12702 213 VQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL-PSPIAD 257 (302)
T ss_pred HHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe-cCCCCC
Confidence 3444444432 345899999999999999999988766 545443
No 158
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.44 E-value=0.00046 Score=75.38 Aligned_cols=139 Identities=15% Similarity=0.180 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|+++|+++.++|+ .....++.+.+.+|+.+. +++.+++.. |+....-.++
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~~----~~~~~~l~~--------~~~~~~~~~~--- 503 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGTN----IYTADVLLK--------GDNRDDLPSG--- 503 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCC----CcCHHHhcC--------CcchhhCCHH---
Confidence 6899999999999999999999999 557899999999999652 223322211 0000000000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
+-.++.+++.. +..-.|+.+-.+| .++++.| .-+.|+||+.||..|.++|.+. +
T Consensus 504 ---------~~~~~~~~~~v-------fAr~~Pe~K~~iV----~~lq~~G---~~VamvGDGvNDapAL~~AdVG---I 557 (755)
T TIGR01647 504 ---------ELGEMVEDADG-------FAEVFPEHKYEIV----EILQKRG---HLVGMTGDGVNDAPALKKADVG---I 557 (755)
T ss_pred ---------HHHHHHHhCCE-------EEecCHHHHHHHH----HHHHhcC---CEEEEEcCCcccHHHHHhCCee---E
Confidence 00011111000 0001133333332 3344444 5689999999999999999954 3
Q ss_pred cCCCCCCCCCCCCcEEec--CCCcc
Q 017067 344 RSSLTSRAEFPSANAVMD--GFGGA 366 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~--~l~e~ 366 (378)
..+...+-..+.||.|+- +|..+
T Consensus 558 Am~~gtdvAkeaADivLl~d~l~~I 582 (755)
T TIGR01647 558 AVAGATDAARSAADIVLTEPGLSVI 582 (755)
T ss_pred EecCCcHHHHHhCCEEEEcCChHHH
Confidence 334334444556888773 44444
No 159
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.43 E-value=0.00036 Score=78.70 Aligned_cols=140 Identities=14% Similarity=0.195 Sum_probs=83.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc---------hheeechhhHHHhhhhccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS---------KIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f---------~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.... +..++++.+...-
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l---------- 711 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL---------- 711 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc----------
Confidence 36899999999999999999999999 5578899999999995321 1123333333210
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHH
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 333 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA 333 (378)
.++ +-.++.+.+. -+..-.|+.+-.+| .++++.| ..+.|+||+.||..|.
T Consensus 712 ----~~~------------~l~~~~~~~~-------V~ar~sP~~K~~iV----~~lq~~g---~~Vam~GDGvNDapaL 761 (1053)
T TIGR01523 712 ----SDE------------EVDDLKALCL-------VIARCAPQTKVKMI----EALHRRK---AFCAMTGDGVNDSPSL 761 (1053)
T ss_pred ----CHH------------HHHHHhhcCe-------EEEecCHHHHHHHH----HHHHhcC---CeeEEeCCCcchHHHH
Confidence 000 0001111100 00001133333332 3334443 5688999999999999
Q ss_pred HHcCCCEEEEcCCC-CCCCCCCCCcEEecC--CCcchH
Q 017067 334 QRIGMPCVVMRSSL-TSRAEFPSANAVMDG--FGGADL 368 (378)
Q Consensus 334 ~~aG~~~i~v~~~~-~~~~~l~~ad~vi~~--l~e~~~ 368 (378)
+.|+ |++..+. ..+.....||+|+.+ |..+..
T Consensus 762 k~Ad---VGIAmg~~gt~vak~aADivl~dd~f~~I~~ 796 (1053)
T TIGR01523 762 KMAN---VGIAMGINGSDVAKDASDIVLSDDNFASILN 796 (1053)
T ss_pred HhCC---ccEecCCCccHHHHHhcCEEEecCCHHHHHH
Confidence 9999 5554442 223344568998854 665543
No 160
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.39 E-value=0.0005 Score=76.91 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh---hhhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS---LYGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~---~~~~~v~g~~v~~~~~~ 260 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..--.. ++.+++.... .+..++.-..|.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~~~~~-vi~G~~~~~l~~~el~~~i~~~~Vf----- 649 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILTFGGL-AMEGKEFRRLVYEEMDPILPKLRVL----- 649 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCCCCce-EeeHHHhhhCCHHHHHHHhccCeEE-----
Confidence 6899999999999999999999999 557889999999999642222 4444443210 000000000010
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
++ -.|+.+-.+| .++++.| .-+.|+||+.||..|.++|.
T Consensus 650 ----------------------ar---------~sPe~K~~iV----~~lq~~g---~vVam~GDGvNDapALk~Ad--- 688 (941)
T TIGR01517 650 ----------------------AR---------SSPLDKQLLV----LMLKDMG---EVVAVTGDGTNDAPALKLAD--- 688 (941)
T ss_pred ----------------------EE---------CCHHHHHHHH----HHHHHCC---CEEEEECCCCchHHHHHhCC---
Confidence 00 1133333333 2344444 46899999999999999999
Q ss_pred EEEcCC-CCCCCCCCCCcEEec--CCCcchHH
Q 017067 341 VVMRSS-LTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 341 i~v~~~-~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
|++..+ ...+...+.||+|+- +|..+...
T Consensus 689 VGIAmg~~gtdvAk~aADivL~dd~f~~I~~~ 720 (941)
T TIGR01517 689 VGFSMGISGTEVAKEASDIILLDDNFASIVRA 720 (941)
T ss_pred cceecCCCccHHHHHhCCEEEecCCHHHHHHH
Confidence 555555 334445566899887 56555433
No 161
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.34 E-value=0.0019 Score=56.88 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
.+||+.++.+.++++||++..+|+..-......+..+...
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 6789999999999999999999995432334455555554
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.26 E-value=0.0033 Score=51.27 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=40.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
-.++||+.++|+.|+++|.+++++||.+..........++.+|+.-..+. ++++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-i~ts 66 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-IITS 66 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-EEEH
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-EECh
Confidence 35899999999999999999999999886665677777899998754444 4444
No 163
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.24 E-value=0.012 Score=54.69 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=33.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
.+.+.||+.+.++.|.++ ++-.|+|. ++...++++...+|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~ST---SY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVIST---SYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEec---cHHHHHHHHHHhcCC
Confidence 477999999999999988 55566666 457888999999988
No 164
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.15 E-value=0.00086 Score=63.16 Aligned_cols=64 Identities=9% Similarity=-0.053 Sum_probs=53.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc-------CCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a-------G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
++.+++++++.++++++|||+.+|+.+++.+ |..+|.|..+ .....|++++++..++...+..|
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQVLEFLGLL 242 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHHHHHHHHHH
Confidence 8888999999999999999999999999999 6677777644 22334899999999987766655
No 165
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.09 E-value=0.0013 Score=74.10 Aligned_cols=151 Identities=19% Similarity=0.236 Sum_probs=84.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh------------hhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL------------YGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~------------~~~~v~ 250 (378)
-+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+..--.. ..+++.... ....+.
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~vi~ 640 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGIISEGNE---TVEDIAARLNIPVSQVNPRDAKACVVH 640 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCcc---chhhhhhhccccccccccccccceEEE
Confidence 36899999999999999999999999 556888999999998432110 001110000 001222
Q ss_pred ccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHH
Q 017067 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 251 g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di 330 (378)
|.....-.++++ .++++++ ...-+..-.|+.+-.+| .++++.| .-+.|+||+.||+
T Consensus 641 G~~l~~l~~~el------------~~~~~~~-----~~~VfaR~sPeqK~~IV----~~lq~~g---~vv~~~GDG~ND~ 696 (997)
T TIGR01106 641 GSDLKDMTSEQL------------DEILKYH-----TEIVFARTSPQQKLIIV----EGCQRQG---AIVAVTGDGVNDS 696 (997)
T ss_pred hHHhhhCCHHHH------------HHHHHhc-----CCEEEEECCHHHHHHHH----HHHHHCC---CEEEEECCCcccH
Confidence 222211111111 1112211 00001111244433443 3345555 3688999999999
Q ss_pred HHHHHcCCCEEEEcCCCC-CCCCCCCCcEEecC--CCcc
Q 017067 331 AGAQRIGMPCVVMRSSLT-SRAEFPSANAVMDG--FGGA 366 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~~~-~~~~l~~ad~vi~~--l~e~ 366 (378)
.|.+.|. |++..+.. .+.....||+|+-+ |.-+
T Consensus 697 paLk~Ad---VGiamg~~G~~vak~aADivL~dd~f~~I 732 (997)
T TIGR01106 697 PALKKAD---IGVAMGIAGSDVSKQAADMILLDDNFASI 732 (997)
T ss_pred HHHhhCC---cceecCCcccHHHHHhhceEEecCCHHHH
Confidence 9999999 55555532 33334557988776 4444
No 166
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.06 E-value=0.001 Score=58.69 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=43.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNE 238 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~ 238 (378)
+.++||+.++|+.|++. +.++|+|++ ....+..+++.+++.. +|...+++.+
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~---~~~yA~~vl~~ldp~~~~F~~ri~~rd 109 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMG---TRAYAQAIAKLIDPDGKYFGDRIISRD 109 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCC---cHHHHHHHHHHhCcCCCeeccEEEEec
Confidence 56899999999999965 999999994 4689999999999984 7755455544
No 167
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.06 E-value=0.005 Score=55.00 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=29.6
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEc-CCCCCCCCCCCC
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMR-SSLTSRAEFPSA 356 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~-~~~~~~~~l~~a 356 (378)
.-.|+.|||-+||.+|+++|.+.|-+. -++.....++.|
T Consensus 185 ~~~IhYGDSD~Di~AAkeaG~RgIRilRAaNSTy~PlP~a 224 (237)
T COG3700 185 NIRIHYGDSDNDITAAKEAGARGIRILRAANSTYKPLPQA 224 (237)
T ss_pred CceEEecCCchhhhHHHhcCccceeEEecCCccCCcCccc
Confidence 346999999999999999999988664 344445556654
No 168
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.03 E-value=0.0014 Score=67.16 Aligned_cols=130 Identities=8% Similarity=0.070 Sum_probs=70.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh---------CccccchheeechhhHHHhhhhccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l---------gi~~~f~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
+..-|.+..+|+.||++|-++-++||+. -..+..++..+ .|.++||++|+.+.-. ..|+.-...-.
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~---~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP--~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSP---FDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP--GFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS----HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC--HHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCC---CchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC--cccCCCCceEE
Confidence 3457899999999999999999999954 57777777743 5788999966655311 23322111111
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCC-cch-hHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHH
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSS-PES-LDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGV 330 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~-p~~-~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di 330 (378)
|....+. + ++.....+-. .+. ..+- .....+.+|....++++|||+. .||
T Consensus 257 vd~~~g~-l-----------------------~~~~~~~~l~~g~vY~gGn---~~~l~~ll~~~g~~VLY~GDhi~~Di 309 (448)
T PF05761_consen 257 VDTETGK-L-----------------------KWGKYVGPLEKGKVYSGGN---WDQLHKLLGWRGKEVLYFGDHIYGDI 309 (448)
T ss_dssp EETTTSS-E-----------------------ECS---SS--TC-EEEE-----HHHHHHHCT--GGGEEEEESSTTTTH
T ss_pred EECCCCc-c-----------------------ccccccccccCCCEeecCC---HHHHHHHHccCCCeEEEECCchhhhh
Confidence 1100000 0 0000000000 000 1111 5666788899999999999997 598
Q ss_pred HHHHHc-CCCEEEEc
Q 017067 331 AGAQRI-GMPCVVMR 344 (378)
Q Consensus 331 ~aA~~a-G~~~i~v~ 344 (378)
...+.. ||+|+.|=
T Consensus 310 ~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 310 LKSKKRHGWRTAAII 324 (448)
T ss_dssp HHHHHHH-SEEEEE-
T ss_pred hhhccccceEEEEEe
Confidence 877777 99999873
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.02 E-value=0.0094 Score=57.25 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
++||+.++|++|+++|++++++||.+..........++.+|+...
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 678999999999999999999999653333444456777887544
No 170
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.99 E-value=0.0013 Score=74.66 Aligned_cols=43 Identities=21% Similarity=0.171 Sum_probs=37.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-++.|||.+.|+.|+++|+++.++|+ .....+..+....|+..
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii~ 672 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLLS 672 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999 44678888888888854
No 171
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.99 E-value=0.0028 Score=70.76 Aligned_cols=131 Identities=14% Similarity=0.186 Sum_probs=80.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch-heeechhhHHHhh---hhccccccccccCc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSL---YGQFVLGKGISSGV 258 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~-~~iv~~~~~~~~~---~~~~v~g~~v~~~~ 258 (378)
-||+|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..--. ..++.+.+...-. +...+.-..|.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~Vf--- 619 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVF--- 619 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEE---
Confidence 57999999999999999999999999 55789999999999754432 2234444432210 00011000010
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
-.=+|+-+-.+ -.++++.| .-+.|.||+.||+.|.++|.+
T Consensus 620 ---------------------------------ARvsP~qK~~I----V~~lq~~g---~vVamtGDGvNDapALk~ADV 659 (917)
T COG0474 620 ---------------------------------ARVSPEQKARI----VEALQKSG---HVVAMTGDGVNDAPALKAADV 659 (917)
T ss_pred ---------------------------------EEcCHHHHHHH----HHHHHhCC---CEEEEeCCCchhHHHHHhcCc
Confidence 00123333333 33455554 568899999999999999995
Q ss_pred CEEEEcCCCCCCCCCCCCcEEec
Q 017067 339 PCVVMRSSLTSRAEFPSANAVMD 361 (378)
Q Consensus 339 ~~i~v~~~~~~~~~l~~ad~vi~ 361 (378)
.......| .+...+.||+|+-
T Consensus 660 GIamg~~G--tdaak~Aadivl~ 680 (917)
T COG0474 660 GIAMGGEG--TDAAKEAADIVLL 680 (917)
T ss_pred cEEecccH--HHHHHhhcceEee
Confidence 55443322 2233344666553
No 172
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.83 E-value=0.003 Score=68.49 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=76.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++|++...+..|+..|++++++|+ .....++.+-+.+|++.-+.. -.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~V~ae------v~---------------------- 770 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDNVYAE------VL---------------------- 770 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcceEEec------cC----------------------
Confidence 35899999999999999999999999 557999999999996653322 00
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+++|.+ + .+.+.-....+.||||+.||-.+...|.+ +
T Consensus 771 --------P~~K~~-------------------------~-------Ik~lq~~~~~VaMVGDGINDaPALA~AdV---G 807 (951)
T KOG0207|consen 771 --------PEQKAE-------------------------K-------IKEIQKNGGPVAMVGDGINDAPALAQADV---G 807 (951)
T ss_pred --------chhhHH-------------------------H-------HHHHHhcCCcEEEEeCCCCccHHHHhhcc---c
Confidence 011111 1 22222233678999999999888888874 3
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcchHH
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
+.-+....-..+.||.|+ ++|.++...
T Consensus 808 Iaig~gs~vAieaADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 808 IAIGAGSDVAIEAADIVLMRNDLRDVPFA 836 (951)
T ss_pred eeeccccHHHHhhCCEEEEccchhhhHHH
Confidence 333333445566688655 566665543
No 173
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.83 E-value=0.0014 Score=60.16 Aligned_cols=58 Identities=10% Similarity=0.085 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG 365 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e 365 (378)
+++..++.+|++++++++|||+.||+.|.+.+|..+++ ++....-...|++++.+-.+
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am---~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM---GNATPELKKAADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE---TTS-HHHHHHSSEEESSGTC
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE---cCCCHHHHHhCCEEecCCCC
Confidence 48889999999999999999999999999999955333 43333333458999998888
No 174
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.71 E-value=0.013 Score=54.85 Aligned_cols=49 Identities=10% Similarity=0.198 Sum_probs=37.1
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHHHhCccccc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERIS 230 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~-~~~~~~~l~~lgi~~~f 230 (378)
...+.||+.+++....++|..+..+||..... ......-|+.+|+....
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~ 169 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL 169 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc
Confidence 35689999999999999999999999976422 23345566677776543
No 175
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.67 E-value=0.0039 Score=67.07 Aligned_cols=134 Identities=13% Similarity=0.211 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch---heeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~---~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
-||+|+|.+.++.+++.|++|..+|+ .....+..+.+..|+-..-+ ...+++++.. ++-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD-----~ls~--------- 645 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDEDVSSMALTGSEFD-----DLSD--------- 645 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCccccccccchhhhh-----cCCH---------
Confidence 47999999999999999999999999 45688999999999743322 2233333221 1110
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
+.++. ++ +++.. +..-.|+-+-++| .++++.| +=+-|-||+.||--+.+.|.
T Consensus 646 -------------~~~~~---~~--~~~~v-FaR~~P~HK~kIV----eaLq~~g---eivAMTGDGVNDApALK~Ad-- 697 (972)
T KOG0202|consen 646 -------------EELDD---AV--RRVLV-FARAEPQHKLKIV----EALQSRG---EVVAMTGDGVNDAPALKKAD-- 697 (972)
T ss_pred -------------HHHHH---Hh--hcceE-EEecCchhHHHHH----HHHHhcC---CEEEecCCCccchhhhhhcc--
Confidence 00000 00 00000 0001133333442 3344444 56789999999999999999
Q ss_pred EEEEcCC-CCCCCCCCCCcEEecC
Q 017067 340 CVVMRSS-LTSRAEFPSANAVMDG 362 (378)
Q Consensus 340 ~i~v~~~-~~~~~~l~~ad~vi~~ 362 (378)
|+++.| ....-..+.+|+|+.|
T Consensus 698 -IGIAMG~~GTdVaKeAsDMVL~D 720 (972)
T KOG0202|consen 698 -IGIAMGISGTDVAKEASDMVLAD 720 (972)
T ss_pred -cceeecCCccHhhHhhhhcEEec
Confidence 677777 3333344557888754
No 176
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.62 E-value=0.0074 Score=53.37 Aligned_cols=30 Identities=17% Similarity=0.390 Sum_probs=25.6
Q ss_pred EEEeCC-HhHHHHHHHcCCCEEEEcCCCCCC
Q 017067 321 FLIAGS-QSGVAGAQRIGMPCVVMRSSLTSR 350 (378)
Q Consensus 321 i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~ 350 (378)
++++|+ .|-++.|+.+|++++.+++++...
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 788998 467888889999999999997664
No 177
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.56 E-value=0.0042 Score=58.49 Aligned_cols=44 Identities=9% Similarity=-0.006 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
+++..++++|+++++|++|||+.||+.|++.+|..+|.+.+...
T Consensus 171 al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 171 ALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred HHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 38889999999999999999999999999998888888876643
No 178
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.50 E-value=0.019 Score=65.21 Aligned_cols=43 Identities=19% Similarity=0.359 Sum_probs=38.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIVN 697 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 36999999999999999999999999 55788889999999953
No 179
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.38 E-value=0.022 Score=59.26 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
+++|++.+.++.|++.|+++.++|+ .....+..+.+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 456888888888886
No 180
>PLN03190 aminophospholipid translocase; Provisional
Probab=96.38 E-value=0.011 Score=67.43 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=35.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
-++++|+.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKLL 766 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCCC
Confidence 36999999999999999999999999 4457777888777774
No 181
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=96.29 E-value=0.062 Score=50.47 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAE 352 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~ 352 (378)
+|++..+++|-+.-.-++|||+.---.+|+..+|+++-+.........
T Consensus 218 cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl~~l 265 (274)
T TIGR01658 218 CFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDSSHR 265 (274)
T ss_pred HHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCHHHh
Confidence 499999999987788899999999999999999999999876444433
No 182
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.23 E-value=0.012 Score=55.48 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCC--CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCC---C-cEEecCCCcch
Q 017067 305 ALRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPS---A-NAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~--p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~---a-d~vi~~l~e~~ 367 (378)
+++..++++|++ ++++++|||+.||+.|.+.+|..+++-+... ...++.. | ++|..+-.+-+
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~-~~~~lk~~~~a~~~vt~~~~~dG 247 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNG-PNVSLKPGDPGSFLLTPAPGPEG 247 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCC-CccccCccCCCcEEEcCCCCcHH
Confidence 378889999999 9999999999999999999995544433221 0022332 3 47887665543
No 183
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.14 E-value=0.0045 Score=57.72 Aligned_cols=57 Identities=9% Similarity=-0.034 Sum_probs=41.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc----EEecCCCc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN----AVMDGFGG 365 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad----~vi~~l~e 365 (378)
++.+++++|++++++++|||+.||+.|++.+|...+ +.+. ..+-...|+ +|.++-.+
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia-v~na--~~~~k~~a~~~~~~v~~~~~~ 224 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV-VGNH--DPELEGLRHQQRIYFANNPHA 224 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE-EcCC--cHHHHHhhcCCcEEEcCCCCh
Confidence 889999999999999999999999999999985543 3332 222222355 66665443
No 184
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.89 E-value=0.011 Score=53.69 Aligned_cols=37 Identities=14% Similarity=0.041 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+++.++++++++++++++|||+.||+.+++.+|+..+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 167 ALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 3888999999999999999999999999999998764
No 185
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.66 E-value=0.026 Score=53.95 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=50.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc---CCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI---GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a---G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+++..++.+|+..+++++|||..||+.|.+.+ |..+|.|.+.. ..|++.+++..++...+..|.
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~------~~A~~~l~~~~~v~~~L~~l~ 244 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA------TQASWRLAGVPDVWSWLEMIT 244 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC------CcCeEeCCCHHHHHHHHHHHH
Confidence 48888999999999999999999999999988 33445554332 337899999998877777665
No 186
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.36 E-value=0.035 Score=50.87 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=29.6
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 189 v~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
..+.|++|+++|++++++|+ +....+..+++.+++..
T Consensus 20 ~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~~ 56 (254)
T PF08282_consen 20 TIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGIDD 56 (254)
T ss_dssp HHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHCS
T ss_pred HHHHHHhhcccceEEEEEcc---Ccccccccccccccchh
Confidence 35677888889999999999 44677888888888773
No 187
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.81 E-value=0.034 Score=52.58 Aligned_cols=44 Identities=20% Similarity=0.104 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
|++..++++++++++++++|||.||+.|. ..+...|.|.+....
T Consensus 169 Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 169 ALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQPE 212 (247)
T ss_dssp HHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-HH
T ss_pred HHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCHH
Confidence 48889999999999999999999999988 777788998876433
No 188
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=94.25 E-value=0.33 Score=46.13 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+.||+.++|+.|+++|++++++||.+..........++.+|+.--.+. ++++...-.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~-i~ts~~~~~ 78 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDE-VFTPAPAAR 78 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHH-eEcHHHHHH
Confidence 688999999999999999999999775444567778888998643333 555544433
No 189
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=93.92 E-value=0.28 Score=46.43 Aligned_cols=60 Identities=30% Similarity=0.524 Sum_probs=40.9
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 174 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 174 ~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
+.+.+....+.+++|+.++++.|+++++|+.|.|+ +....+..+++..|.. +....|+++
T Consensus 80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~~-~~Nv~VvSN 139 (246)
T PF05822_consen 80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGVF-HPNVKVVSN 139 (246)
T ss_dssp HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT---BTTEEEEEE
T ss_pred HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCCC-CCCeEEEee
Confidence 34455555788999999999999999999999999 7789999999988543 233445555
No 190
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=93.86 E-value=0.23 Score=52.47 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCCCCcEE-EEeCCHhHHHHHHHcCCC
Q 017067 303 VAALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 303 ~~a~~~a~~~lgv~p~~~i-~VGDs~~Di~aA~~aG~~ 339 (378)
|+|+.-..+.+.-..+-.+ -||...+|+-.-+++|++
T Consensus 635 IAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 635 IACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred HHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCC
Confidence 4556555566652223222 389999999999999986
No 191
>PTZ00174 phosphomannomutase; Provisional
Probab=93.58 E-value=0.053 Score=51.08 Aligned_cols=37 Identities=5% Similarity=-0.047 Sum_probs=31.6
Q ss_pred HHHHHHHcCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~ 346 (378)
++..+++ ++++++||| +.||+.|.+.+|..++.|.++
T Consensus 193 l~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~ 233 (247)
T PTZ00174 193 LRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNP 233 (247)
T ss_pred HHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCH
Confidence 6777777 699999999 899999999988887888744
No 192
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.23 E-value=0.28 Score=39.84 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=21.5
Q ss_pred EEEeccccccccccc-chHHHHHHHHHHcCCCC
Q 017067 87 VLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (378)
Q Consensus 87 viFDlDGTLid~~~~-~~~~a~~~~~~~~gl~~ 118 (378)
++||+||||+..... .-...+-+.+++.|.+.
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~ 33 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPV 33 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCE
Confidence 689999999986543 12244455666677764
No 193
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.18 E-value=0.09 Score=45.79 Aligned_cols=48 Identities=19% Similarity=0.504 Sum_probs=37.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc-cccchhee
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 234 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi-~~~f~~~i 234 (378)
+..+||+.++|+.+.+. +.++|.|.+ ....++.+++.+.+ ..+|...+
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~---~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSA---SEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS----HHHHHHHHHHHTTTTSSEEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEee---hhhhhhHHHHhhhhhcccccccc
Confidence 45899999999999666 999999994 47899999999998 46676543
No 194
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=93.06 E-value=0.16 Score=52.51 Aligned_cols=45 Identities=16% Similarity=0.354 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
..||++|=..+||+.|++.+.+|+ ..+-.+..+....|++++...
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfiAe 492 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFIAE 492 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhhhc
Confidence 579999999999999999999999 446778888899999987643
No 195
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=92.59 E-value=1 Score=46.75 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=27.3
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccc
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSER 228 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~ 228 (378)
.++..+..| +++|+|. +++.+++..++. +|.+.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCce
Confidence 556667788 9999999 678999999998 88765
No 196
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.56 E-value=1.4 Score=41.15 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=36.3
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKI 232 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~ 232 (378)
.++|++.+.|+.++++|+++.++||.+..........+.. +|+.-..+.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~ 63 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQ 63 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 4689999999999999999999999873344444445555 787544444
No 197
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.55 E-value=0.65 Score=47.39 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=75.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+-+.-...++.+.+.+.|.+|+++|.-- -+....+.++...|++-.--. ++.+.+..-.
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nip-iY~S~e~rl~------------------- 156 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIP-IYMSSEFRLK------------------- 156 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCce-eeecceeehh-------------------
Confidence 3455567789999999999999999855 245777888888887654322 4444332211
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-HHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i 341 (378)
|-+-++ |.++++...++|.+-+++||..+ |+.+++..|+.|.
T Consensus 157 -----------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 -----------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred -----------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 222233 88899999999999999999875 9999999998876
Q ss_pred EE
Q 017067 342 VM 343 (378)
Q Consensus 342 ~v 343 (378)
..
T Consensus 200 f~ 201 (635)
T COG5610 200 FY 201 (635)
T ss_pred HH
Confidence 54
No 198
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.24 E-value=0.34 Score=46.31 Aligned_cols=35 Identities=3% Similarity=-0.082 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 187 PGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 187 pgv~~lL~~Lk~-~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
|.+.+.|+.|++ .|+.++|+|+. ....+..+++.+
T Consensus 39 ~~~~~~L~~L~~~~g~~v~i~SGR---~~~~~~~~~~~~ 74 (266)
T PRK10187 39 DNILQGLQLLATANDGALALISGR---SMVELDALAKPY 74 (266)
T ss_pred HHHHHHHHHHHhCCCCcEEEEeCC---CHHHHHHhcCcc
Confidence 344667777776 68888888884 344454454433
No 199
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=92.19 E-value=0.23 Score=54.23 Aligned_cols=64 Identities=11% Similarity=0.042 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+++..++ +++++.++++||+.||+.|.+.++...+.|..+.. -..|++++++..|+-.++..|.
T Consensus 661 al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 661 AVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred HHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHHHHHHHHHHh
Confidence 3666676 78899999999999999999998533333333322 2348999999988776666654
No 200
>PLN02423 phosphomannomutase
Probab=91.91 E-value=0.13 Score=48.45 Aligned_cols=37 Identities=5% Similarity=-0.064 Sum_probs=32.0
Q ss_pred HHHcCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcCCC
Q 017067 310 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~~ 347 (378)
++.+. +++++++||| +.||++|.+.-|+.++-|.++.
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 44444 9999999999 7999999999999999998773
No 201
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=91.88 E-value=0.57 Score=47.50 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=28.8
Q ss_pred HHHHHHHHcCCCCCcEE-EEeCCHhHHHHHHHcCCC
Q 017067 305 ALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i-~VGDs~~Di~aA~~aG~~ 339 (378)
||..-++.++..++-.+ -+|...+|+.+-..+|++
T Consensus 481 ayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 481 AYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 47777888888777555 589999999999999985
No 202
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=91.74 E-value=1.2 Score=43.64 Aligned_cols=27 Identities=19% Similarity=0.176 Sum_probs=18.9
Q ss_pred CCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 315 v~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
..-++++++|+. +--+.|+..|++-|.
T Consensus 118 ~~~k~vLv~G~~-~vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 118 YHYKRVLVVGQG-SVREVAEGYGFKNVV 144 (389)
T ss_pred hhhceEEEecCC-cHHHHhhccCcccee
Confidence 345778888854 345678888888665
No 203
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.45 E-value=0.73 Score=50.35 Aligned_cols=43 Identities=26% Similarity=0.430 Sum_probs=37.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-|.+|||.+.++.++.+|+.|-.+|+ ..-..++.+....||..
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGILt 688 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGILT 688 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHccccc
Confidence 46899999999999999999999999 44678889999999853
No 204
>PTZ00174 phosphomannomutase; Provisional
Probab=90.21 E-value=0.16 Score=47.80 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=24.2
Q ss_pred CCccEEEEecccccccccccchHHHHHHHH---HHcCCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLDC 118 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~---~~~gl~~ 118 (378)
|++|.|+|||||||++.... ......+++ .+.|+..
T Consensus 3 ~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~~ 41 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFKI 41 (247)
T ss_pred CCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCEE
Confidence 66899999999999998653 223334443 3456654
No 205
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=89.77 E-value=0.49 Score=47.29 Aligned_cols=26 Identities=31% Similarity=0.526 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
++|.+..=|+.|.+.||.+.|.||..
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred eccccchhhhhhccCCeEEEEEeccc
Confidence 45556667788888899999999865
No 206
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=89.40 E-value=1.1 Score=39.31 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCC
Q 017067 315 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSR 350 (378)
Q Consensus 315 v~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~ 350 (378)
..+++.+||||.. +||-+|...|.-.||+..+....
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~ 173 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAE 173 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccccc
Confidence 5689999999996 79999999999999998886554
No 207
>PLN02423 phosphomannomutase
Probab=89.08 E-value=0.42 Score=45.04 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=20.0
Q ss_pred CCccEEE-EecccccccccccchHHHHHHHHHH
Q 017067 82 PRDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (378)
Q Consensus 82 ~~~kavi-FDlDGTLid~~~~~~~~a~~~~~~~ 113 (378)
.++++++ |||||||++.... ......+++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred CccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 4567666 9999999987653 33333444443
No 208
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=88.92 E-value=0.56 Score=46.33 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=70.1
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHH---HhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE---KLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~---~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
-.|....+++.|+++|-++-++||+ +-.++..-+. --.|.++|++.|+-++.. +.|+.-.- -....|+.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNS---PysFVd~GM~flvG~~WRdlFDVVIvqA~KP--~Fftde~r---PfR~~dek 312 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNS---PYSFVDKGMRFLVGDDWRDLFDVVIVQANKP--EFFTDERR---PFRKYDEK 312 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCC---chhhhhcCceeeeCccHHhhhheeEEecCCC--cccccccC---cchhhccc
Confidence 4567788999999999999999995 4555543332 334678898865543221 11211110 00001100
Q ss_pred ---hhHHHHHHhhHHHHHHHHHHHhhhccccc-cCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHH-H
Q 017067 262 ---LATEARKAVSAQKQEIAEEVASMLKLSVD-IDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-R 335 (378)
Q Consensus 262 ---~~~~~~ka~~~~~~~~~~~~~~~~KP~p~-i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~-~ 335 (378)
+.|..- - |..++ |+ ..+- +...++.-|-.-.+++++||+. +|+.... .
T Consensus 313 ~~sl~wdkv--------------~---klekgkiY------y~G~---l~~flelt~WrG~~VlYFGDHlySDLad~tlk 366 (510)
T KOG2470|consen 313 RGSLLWDKV--------------D---KLEKGKIY------YQGN---LKSFLELTGWRGPRVLYFGDHLYSDLADLTLK 366 (510)
T ss_pred ccchhhhhh--------------h---hcccCcee------eecc---HHHHHHHhccCCCeeEEecCcchhhhhhhHhh
Confidence 111110 0 11100 00 0111 4455666677788999999996 6998877 8
Q ss_pred cCCCEEEE
Q 017067 336 IGMPCVVM 343 (378)
Q Consensus 336 aG~~~i~v 343 (378)
+||++-.+
T Consensus 367 hgWRTgAI 374 (510)
T KOG2470|consen 367 HGWRTGAI 374 (510)
T ss_pred cccccccc
Confidence 99987654
No 209
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=88.53 E-value=6.6 Score=37.46 Aligned_cols=27 Identities=7% Similarity=0.112 Sum_probs=23.9
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
||++|....++.|. .+++++.|+.+..
T Consensus 236 IFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 236 IFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred EeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 89999999999998 8899999987754
No 210
>PLN02580 trehalose-phosphatase
Probab=88.51 E-value=1.1 Score=45.12 Aligned_cols=66 Identities=11% Similarity=0.000 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCCCCc-E--EEEeCCHhHHHHHHHc-----CCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 305 ALRAGAEYAEKPVRN-C--FLIAGSQSGVAGAQRI-----GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 305 a~~~a~~~lgv~p~~-~--i~VGDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|.+..++.+|+...+ + ++|||..||..|.+.+ |+ .|.|..+. .-..|.+.+++..++...+..|..
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~----~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVP----KESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCC----CCccceEEcCCHHHHHHHHHHHHH
Confidence 478889999988764 3 8999999999999863 43 34444331 122478999999998877777653
No 211
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=88.17 E-value=0.29 Score=41.65 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=20.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
+.+++.+.|+.++++|+.++++|+..
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~ 50 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRN 50 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 44566778888889999999999854
No 212
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=88.04 E-value=1.6 Score=49.73 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=34.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-++..||.+.|+.|+++|+|+.++|+ .-.+.+..+.-..++.+
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~Ll~ 692 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRLLR 692 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcCCC
Confidence 45889999999999999999999999 33456666666666543
No 213
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=87.39 E-value=0.49 Score=43.29 Aligned_cols=39 Identities=21% Similarity=0.445 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
.+|++.++|+.+.+. +.++|-|.+. ...+..+++.+++.
T Consensus 46 kRP~l~eFL~~~~~~-feIvVwTAa~---~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 46 MRPYLHEFLTSAYED-YDIVIWSATS---MKWIEIKMTELGVL 84 (195)
T ss_pred eCCCHHHHHHHHHhC-CEEEEEecCC---HHHHHHHHHHhccc
Confidence 689999999999995 9999999954 58999999998874
No 214
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=86.78 E-value=0.32 Score=42.42 Aligned_cols=15 Identities=47% Similarity=0.698 Sum_probs=13.4
Q ss_pred ccEEEEecccccccc
Q 017067 84 DLAVLLEVDGVLVDA 98 (378)
Q Consensus 84 ~kaviFDlDGTLid~ 98 (378)
+|+|+||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 478999999999994
No 215
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=86.14 E-value=1.4 Score=42.33 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=27.0
Q ss_pred CCCccEEEEeccccccccccc-chHHHHHHHHHHcCCCC
Q 017067 81 PPRDLAVLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~-~~~~a~~~~~~~~gl~~ 118 (378)
...+++++||+||||++.... .-...+-+.+++.|++.
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~ 43 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV 43 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE
Confidence 456889999999999986653 12244455666788874
No 216
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=86.02 E-value=0.4 Score=42.82 Aligned_cols=18 Identities=39% Similarity=0.553 Sum_probs=15.6
Q ss_pred CCccEEEEeccccccccc
Q 017067 82 PRDLAVLLEVDGVLVDAY 99 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~ 99 (378)
..+|+++||+||||+|..
T Consensus 5 ~~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDGR 22 (169)
T ss_pred ccCeEEEEeCceeeECCe
Confidence 458999999999999963
No 217
>PLN03017 trehalose-phosphatase
Probab=84.50 E-value=2 Score=43.04 Aligned_cols=67 Identities=9% Similarity=-0.106 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCCC---CcEEEEeCCHhHHHHHHHcC----CCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 305 ALRAGAEYAEKPV---RNCFLIAGSQSGVAGAQRIG----MPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 305 a~~~a~~~lgv~p---~~~i~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|.+..++.+|... .-.+||||-.+|-.|.+.+. --.|.|.... .-..|.+.+++..++...|..|..
T Consensus 287 Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~----k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 287 ALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFP----KDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred HHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCC----CCCcceEeCCCHHHHHHHHHHHHH
Confidence 5788889988653 35899999999988887662 2355665321 113488999999999887777753
No 218
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=84.22 E-value=0.5 Score=42.44 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.6
Q ss_pred CccEEEEecccccccc
Q 017067 83 RDLAVLLEVDGVLVDA 98 (378)
Q Consensus 83 ~~kaviFDlDGTLid~ 98 (378)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999985
No 219
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=84.06 E-value=0.51 Score=41.56 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=35.1
Q ss_pred CCCccEEEEeccccccccccc-----chHHHH-------HHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHc
Q 017067 81 PPRDLAVLLEVDGVLVDAYRF-----GNRQAF-------NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRI 148 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~-----~~~~a~-------~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (378)
..++|.+|||+||||+|..-. ...++| -+.+.+.|+.. .+.+|....+.+.-.+.+
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~v------------AIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKV------------AIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeE------------EEEeCCCCHHHHHHHHHc
Confidence 457899999999999995321 011222 24455566653 133444555555666667
Q ss_pred CCCC
Q 017067 149 GWPT 152 (378)
Q Consensus 149 g~~~ 152 (378)
|+..
T Consensus 73 GI~~ 76 (170)
T COG1778 73 GIKH 76 (170)
T ss_pred CCce
Confidence 7653
No 220
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=84.01 E-value=2.2 Score=47.62 Aligned_cols=63 Identities=10% Similarity=-0.083 Sum_probs=46.0
Q ss_pred HHHHH---HHcCCCCCcEEEEeCCHhHHHHHHHcCC-------------CEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 306 LRAGA---EYAEKPVRNCFLIAGSQSGVAGAQRIGM-------------PCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 306 ~~~a~---~~lgv~p~~~i~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
++..+ +.+|..++.+++|||..||..|.+.++- -+|.|... -..|.+.+++..|+...
T Consensus 767 l~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~------~S~A~y~L~d~~eV~~l 840 (854)
T PLN02205 767 AKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK------PSKAKYYLDDTAEIVRL 840 (854)
T ss_pred HHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC------CccCeEecCCHHHHHHH
Confidence 44444 5579999999999999999999998862 23444422 23378999999888776
Q ss_pred HHHHh
Q 017067 370 ISKLR 374 (378)
Q Consensus 370 ~~~l~ 374 (378)
+..|.
T Consensus 841 L~~L~ 845 (854)
T PLN02205 841 MQGLA 845 (854)
T ss_pred HHHHH
Confidence 66654
No 221
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=83.72 E-value=1.8 Score=47.31 Aligned_cols=33 Identities=3% Similarity=0.056 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHH
Q 017067 187 PGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVE 222 (378)
Q Consensus 187 pgv~~lL~~Lk~-~G~~v~ivTn~~~~~~~~~~~~l~ 222 (378)
+.+.+.|+.|.+ .|+.++|+|+.+ ....+..+.
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~---~~~l~~~~~ 550 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRD---RDTLERWFG 550 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCC---HHHHHHHhC
Confidence 445678888888 499999999943 354444443
No 222
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=83.60 E-value=3 Score=45.75 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=36.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
-||+..+.+.+..++.+|+++..+|+ .....+..+.+..|+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTg---dhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKSVGI 629 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEec---Cccchhhhhhhheee
Confidence 46899999999999999999999999 556888888888885
No 223
>PLN02580 trehalose-phosphatase
Probab=83.07 E-value=2.3 Score=42.91 Aligned_cols=33 Identities=9% Similarity=0.191 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l 221 (378)
+-|++.+.|+.|.+. .+++|+|+.+ ...++.++
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~---~~~L~~~l 174 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRS---RDKVYELV 174 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCC---HHHHHHHh
Confidence 456778888998887 5899999954 34444443
No 224
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=82.47 E-value=0.71 Score=38.91 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=13.3
Q ss_pred cEEEEeccccccccc
Q 017067 85 LAVLLEVDGVLVDAY 99 (378)
Q Consensus 85 kaviFDlDGTLid~~ 99 (378)
|+++||+||||++..
T Consensus 1 kli~~DlD~Tl~~~~ 15 (128)
T TIGR01681 1 KVIVFDLDNTLWTGE 15 (128)
T ss_pred CEEEEeCCCCCCCCC
Confidence 579999999999874
No 225
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=81.76 E-value=2.2 Score=40.55 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
.|++.++|+.|+++|++++++|| +....+..+++.+|+..++
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCCE
Confidence 35578899999999999999999 4467888899999987543
No 226
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=81.47 E-value=2.7 Score=46.01 Aligned_cols=156 Identities=13% Similarity=0.134 Sum_probs=81.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh-HHHhhhhcccccccc-ccC--
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE-VERSLYGQFVLGKGI-SSG-- 257 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~-~~~~~~~~~v~g~~v-~~~-- 257 (378)
..|+.|+.+..|+.|.+.+++++.+|+- ..-.+..+.+.+|+.+---..+.-.++ -++.+-=.-++|..+ +-.
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGD---npLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~ 749 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGD---NPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPG 749 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCC---CccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCC
Confidence 4789999999999999999999999993 345666777777775432111111111 111000000111100 000
Q ss_pred cchh-hhHHHHHHhhHHHHH--HHHHHHhhhccccccCCC-CcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHH
Q 017067 258 VDEQ-LATEARKAVSAQKQE--IAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 333 (378)
Q Consensus 258 ~~~~-~~~~~~ka~~~~~~~--~~~~~~~~~KP~p~i~kp-~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA 333 (378)
.++. +....+-........ .+-+.....=|+..++-- +|+..+.+|+. ++.+|. -++|-||+.||+-|.
T Consensus 750 ~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~t----lK~~Gy---~TLMCGDGTNDVGAL 822 (1160)
T KOG0209|consen 750 KKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITT----LKKLGY---VTLMCGDGTNDVGAL 822 (1160)
T ss_pred ccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHH----HHhcCe---EEEEecCCCcchhhh
Confidence 0000 000000000000000 111222223333333221 35556666444 456664 589999999999999
Q ss_pred HHcCCCEEEEcCCC
Q 017067 334 QRIGMPCVVMRSSL 347 (378)
Q Consensus 334 ~~aG~~~i~v~~~~ 347 (378)
+.|.+.....+++.
T Consensus 823 K~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 823 KQAHVGVALLNNPE 836 (1160)
T ss_pred hhcccceehhcCCh
Confidence 99998888887775
No 227
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=80.58 E-value=9 Score=37.55 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHHHC----CCcEEEEeCCCCCchHH-HHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNE----GIPLIVLTAYGKSGDRI-ARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~----G~~v~ivTn~~~~~~~~-~~~~l~~lgi~ 227 (378)
+.||+.++++.|+.+ |+++.++||.+...... ++.+.+.+|+.
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 589999999999998 99999999965322333 44444777764
No 228
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=80.02 E-value=2.7 Score=36.48 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=23.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCC
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAY 209 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~ 209 (378)
+...|++++++++|-+. +.|+|+|..
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaa 92 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAA 92 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEec
Confidence 45899999999999988 999999986
No 229
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=78.59 E-value=22 Score=38.60 Aligned_cols=40 Identities=20% Similarity=0.154 Sum_probs=28.5
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
++..+|+..|+.||++|+++..+|+-. -+.+.-+.+..++
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDK---lETA~ciAkSs~L 697 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDK---LETAICIAKSSRL 697 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcc---hhheeeeehhccc
Confidence 467788899999999999999999922 2334444444444
No 230
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=77.89 E-value=10 Score=32.27 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
..++++.+.|..|+++|+.+++.|++. ....+...|+.+.+...+
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~--ap~iA~q~L~~fkvk~~G 88 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTM--APQIASQGLETFKVKQTG 88 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHHhccCccc
Confidence 478999999999999999999999975 368888999988876554
No 231
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=76.82 E-value=4.7 Score=37.42 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.|...++|++|+++|++++++|+. ....+..+++.+|+..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~TgR---~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSSK---TRAEQEYYREELGVEP 56 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCCC
Confidence 456899999999999999999994 4567788889999865
No 232
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=76.56 E-value=4.3 Score=37.00 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=32.1
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 189 v~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
..++|+.|+++|++++++|| +....+..+++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~Tg---R~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTS---KTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 68899999999999999999 5568888999999986
No 233
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=75.98 E-value=4.4 Score=36.89 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
+.|...+.|++|+++|++++++|+. ....++.+.+.+++..+
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR---~~~~~~~~~~~l~~~~~ 60 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGN---TVPFARALAVLIGTSGP 60 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCC---cchhHHHHHHHhCCCCc
Confidence 3456788999999999999999994 45777888888888643
No 234
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=74.80 E-value=1.8 Score=38.44 Aligned_cols=17 Identities=29% Similarity=0.337 Sum_probs=14.0
Q ss_pred CccEEEEeccccccccc
Q 017067 83 RDLAVLLEVDGVLVDAY 99 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~ 99 (378)
.+|+++||.||||+-..
T Consensus 2 ~~~~~~~d~~~t~~~~~ 18 (181)
T PRK08942 2 SMKAIFLDRDGVINVDS 18 (181)
T ss_pred CccEEEEECCCCcccCC
Confidence 47899999999986544
No 235
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=74.15 E-value=3 Score=36.88 Aligned_cols=13 Identities=31% Similarity=0.468 Sum_probs=11.8
Q ss_pred cEEEEeccccccc
Q 017067 85 LAVLLEVDGVLVD 97 (378)
Q Consensus 85 kaviFDlDGTLid 97 (378)
++++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999995
No 236
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=72.91 E-value=5.9 Score=36.18 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
|...+.|++|+++|++++++|+. ....+..+++.+++..+
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGN---VLCFARAAAKLIGTSGP 62 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHhCCCCc
Confidence 45678899999999999999994 45677778888887643
No 237
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=72.45 E-value=1.9 Score=37.30 Aligned_cols=17 Identities=29% Similarity=0.499 Sum_probs=13.7
Q ss_pred cEEEEeccccccccccc
Q 017067 85 LAVLLEVDGVLVDAYRF 101 (378)
Q Consensus 85 kaviFDlDGTLid~~~~ 101 (378)
|.++||+||||+.+...
T Consensus 1 k~LVlDLD~TLv~~~~~ 17 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSK 17 (159)
T ss_dssp EEEEEE-CTTTEEEESS
T ss_pred CEEEEeCCCcEEEEeec
Confidence 57999999999998764
No 238
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=72.10 E-value=3 Score=37.22 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=16.4
Q ss_pred CCCccEEEEecccccccccc
Q 017067 81 PPRDLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~ 100 (378)
..-+++|+||+|.||+.-+.
T Consensus 38 ~~Gik~li~DkDNTL~~~~~ 57 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYE 57 (168)
T ss_pred hcCceEEEEcCCCCCCCCCc
Confidence 45689999999999986544
No 239
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=72.07 E-value=6.3 Score=39.83 Aligned_cols=122 Identities=11% Similarity=0.020 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh------hcccccccc-----c
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY------GQFVLGKGI-----S 255 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~------~~~v~g~~v-----~ 255 (378)
+-...+|..+++.|-++-++||+...+.+..-...-..++..+|++.++.+... +.| .+.....+. .
T Consensus 201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp--~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKP--GFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCC--ccccccceeeeecccccccccccc
Confidence 334449999999999999999976433333333332357889999876654211 011 011111100 0
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-HH-HHH
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GV-AGA 333 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~-Di-~aA 333 (378)
.++- | .+.+++..+ ...+++.+++.-.+.++|||+.+ || ..-
T Consensus 279 ~~p~-------------------e---~~~~ySggs--------------~~~~~~~l~~~g~diLy~gdHi~~dvl~sk 322 (424)
T KOG2469|consen 279 TGPL-------------------E---QGGVYSGGS--------------LKTVETSMKVKGKDILYGGDHIWGDVLVSK 322 (424)
T ss_pred CCcc-------------------h---hcccCCcch--------------HHHHHHHhcccccceeecccceeeeEEecc
Confidence 0000 0 001222222 66778888888899999999986 54 444
Q ss_pred HHcCCCEEEEcCC
Q 017067 334 QRIGMPCVVMRSS 346 (378)
Q Consensus 334 ~~aG~~~i~v~~~ 346 (378)
+.-|+.++.|...
T Consensus 323 k~~~wrt~lv~pe 335 (424)
T KOG2469|consen 323 KRRGWRTVLVAPE 335 (424)
T ss_pred eecceEEEEEehh
Confidence 6778888877544
No 240
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=71.76 E-value=6.9 Score=36.56 Aligned_cols=41 Identities=15% Similarity=0.388 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
+.+...+.|++|+++|++++++|+. ....+...++.+++..
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR---~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGR---PYKEVKNILKELGLDT 57 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCCC
Confidence 4456788999999999999999994 4567778888888763
No 241
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=70.66 E-value=8 Score=36.34 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
|...+.|++|+++|++++++|+ +....+..+++.+++..
T Consensus 23 ~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 23 PAVKQAIAAARAKGVNVVLTTG---RPYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHHHHHHHHCCCEEEEecC---CChHHHHHHHHHhCCCC
Confidence 4457889999999999999999 44577788888888754
No 242
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=70.64 E-value=1.2e+02 Score=30.81 Aligned_cols=41 Identities=12% Similarity=0.081 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
+|+++.+|+|- .-.-++|||+.---.+|++..|+++-+..-
T Consensus 413 cFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 413 CFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred HHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeeccC
Confidence 49999999996 556677999988899999999999988654
No 243
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=70.25 E-value=6.8 Score=37.01 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
.+...+.|++|+++|++++++|+. ....++.+++.+++..+
T Consensus 21 ~~~~~~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 21 GEKTLSTLARLRERDITLTFATGR---HVLEMQHILGALSLDAY 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCC---CHHHHHHHHHHcCCCCc
Confidence 344678899999999999999994 45777888899988643
No 244
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.23 E-value=13 Score=35.53 Aligned_cols=41 Identities=27% Similarity=0.434 Sum_probs=32.5
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg 225 (378)
.+.++.|+.++...|+++++|+.|.|. +....+..++...+
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSA---GigdiiEev~~q~~ 176 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSA---GIGDIIEEVTRQKL 176 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEec---chHHHHHHHHHHHh
Confidence 455788999999999999999999999 55566666665433
No 245
>PRK10976 putative hydrolase; Provisional
Probab=69.51 E-value=7.4 Score=36.51 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
|...+.|++++++|++++++|+. ....+..+++.+++..+
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~~ 61 (266)
T PRK10976 22 PYAKETLKLLTARGIHFVFATGR---HHVDVGQIRDNLEIKSY 61 (266)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHhcCCCCe
Confidence 44678899999999999999994 45667788888887643
No 246
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=69.48 E-value=7.9 Score=36.32 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=37.3
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
...+...+.|++++++|++++++|+ +....+..+++.+++..
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTG---R~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATG---RPLPDVLSILEELGLDG 61 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCc
Confidence 3778899999999999999999999 44688999999999986
No 247
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=69.45 E-value=7.9 Score=36.25 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.|...+.|++++++|++++++|+ +....+...++.+++..
T Consensus 22 ~~~~~~ai~~~~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 22 LPESLEALARAREAGYKVIIVTG---RHHVAIHPFYQALALDT 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHhcCCCC
Confidence 34567889999999999999999 44566778888888764
No 248
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=69.41 E-value=2.6 Score=39.43 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=13.1
Q ss_pred ccEEEEecccccccc
Q 017067 84 DLAVLLEVDGVLVDA 98 (378)
Q Consensus 84 ~kaviFDlDGTLid~ 98 (378)
.++++||+||||++.
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 468999999999985
No 249
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=69.22 E-value=15 Score=33.84 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=21.2
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHc
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~ 114 (378)
...++||+||||+..... ....+.+.++++
T Consensus 11 ~~l~lfdvdgtLt~~r~~-~~~e~~~~l~~l 40 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQK-VTPEMLEFLQKL 40 (252)
T ss_pred ceEEEEecCCcccccccc-CCHHHHHHHHHH
Confidence 348999999999987654 345556666654
No 250
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=69.04 E-value=8.8 Score=35.97 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
+...++|+.|+++|++++++|+ +....+..+++.+|+..
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~Tg---R~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTS---KTAAEVEYLRKELGLED 57 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCC
Confidence 3468899999999999999999 44677888999998753
No 251
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=69.01 E-value=39 Score=35.70 Aligned_cols=32 Identities=13% Similarity=0.072 Sum_probs=25.4
Q ss_pred HHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
++..|++ ++|||... ...|+++||+.|.+.++
T Consensus 141 l~~~G~~----~viG~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 141 LRARGIG----AVVGAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHCCCC----EEECChHH-HHHHHHcCCceEEEecH
Confidence 4556653 78899964 77899999999999876
No 252
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=67.80 E-value=9 Score=32.50 Aligned_cols=15 Identities=7% Similarity=0.217 Sum_probs=12.8
Q ss_pred ccEEEEecccccccc
Q 017067 84 DLAVLLEVDGVLVDA 98 (378)
Q Consensus 84 ~kaviFDlDGTLid~ 98 (378)
+|+|+||+||||+..
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 479999999999764
No 253
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=67.51 E-value=9.1 Score=34.71 Aligned_cols=41 Identities=20% Similarity=0.410 Sum_probs=32.5
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
+.|...+.|++++++|++++++|+. ....+..+++.+++..
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR---~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGN---SVQFARALAKLIGTPD 56 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHhCCCC
Confidence 4456678899999999999999994 4566777888888543
No 254
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=67.21 E-value=14 Score=32.74 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=20.3
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
++||++.. ...|++.|++++.+.++
T Consensus 128 viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 128 VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 78999864 78999999999999876
No 255
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=66.72 E-value=11 Score=36.40 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~ 238 (378)
..|.+.+-|.+|++.|..+++=|- |....+...++.+++..+|+..+..+.
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIICGGN 193 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEeCCc
Confidence 568999999999999998998888 457999999999999999998665543
No 256
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=65.06 E-value=23 Score=34.52 Aligned_cols=32 Identities=16% Similarity=0.337 Sum_probs=28.2
Q ss_pred hcCCCCCCCCHHHHHHHHHHCC-CcEEEEeCCC
Q 017067 179 ASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYG 210 (378)
Q Consensus 179 ~~~~~~~~pgv~~lL~~Lk~~G-~~v~ivTn~~ 210 (378)
.++...++|..-++|+.+++.| +++.||||++
T Consensus 87 ~~GEPTLy~~L~elI~~~k~~g~~~tflvTNgs 119 (296)
T COG0731 87 LSGEPTLYPNLGELIEEIKKRGKKTTFLVTNGS 119 (296)
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEeCCC
Confidence 3556779999999999999999 7999999964
No 257
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=64.40 E-value=11 Score=36.78 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 188 gv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
.+.+.|++|+++|++++++|+.. ...+..+.+.+++...
T Consensus 22 ~a~~aL~~Lk~~GI~vVlaTGRt---~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 22 AARQALAALERRSIPLVLYSLRT---RAQLEHLCRQLRLEHP 60 (302)
T ss_pred HHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHhCCCCe
Confidence 35788999999999999999954 5778888999998754
No 258
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.80 E-value=12 Score=35.14 Aligned_cols=26 Identities=0% Similarity=0.010 Sum_probs=18.7
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcC
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (378)
-++-+||+.||+-+.. .++.++.|.+
T Consensus 211 ~t~~~GDg~nD~Pl~e-v~d~AfiV~~ 236 (274)
T COG3769 211 TTLGLGDGPNDAPLLE-VMDYAFIVKG 236 (274)
T ss_pred EEEecCCCCCcccHHH-hhhhheeecc
Confidence 4888999999997765 4555555553
No 259
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=63.51 E-value=28 Score=34.40 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=26.0
Q ss_pred CCCCCCCHHHHHHHHHHCC-CcEEEEeCCCC
Q 017067 182 DAPLRPGVEDFVDDAYNEG-IPLIVLTAYGK 211 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G-~~v~ivTn~~~ 211 (378)
.-+++|||-.+.+.|.+.| -++..|||+..
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw 224 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPW 224 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChh
Confidence 3568999999999999988 89999999643
No 260
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=63.46 E-value=34 Score=35.65 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=62.6
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~ 264 (378)
++-..+++|..|+++|+-++|+|- +....++.++.+..- .++-.++... ....++
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SK---N~~~da~evF~khp~------MiLkeedfa~-----------~~iNW~----- 310 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSK---NTEKDAKEVFRKHPD------MILKEEDFAV-----------FQINWD----- 310 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecC---CchhhHHHHHhhCCC------eEeeHhhhhh-----------heecCC-----
Confidence 445568899999999999999987 456777777765331 1222222211 011111
Q ss_pred HHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 265 ~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
+|+.. +++.++++++..+..+|++|++...+--++-+=
T Consensus 311 --~K~eN----------------------------------irkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 311 --PKAEN----------------------------------IRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred --cchhh----------------------------------HHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 12211 788899999999999999999988887777764
No 261
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=63.08 E-value=78 Score=29.98 Aligned_cols=46 Identities=17% Similarity=0.327 Sum_probs=32.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHh--HHHHHHHcCCCEEEEcCC--CCCCCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQS--GVAGAQRIGMPCVVMRSS--LTSRAEFP 354 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~--Di~aA~~aG~~~i~v~~~--~~~~~~l~ 354 (378)
=+..++..|+ -||+|||.+. +..+.++.|+..|.+... ..++.+|-
T Consensus 79 ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk~DpMIGArREFL 128 (277)
T PRK00994 79 AREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVKADPMIGARREFL 128 (277)
T ss_pred HHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEecCccccchhhcc
Confidence 3555666677 5999999873 678999999998887533 34444443
No 262
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=62.12 E-value=61 Score=34.39 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=25.5
Q ss_pred HHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
++..|++ ++|||... ...|.++|+..+++.++
T Consensus 151 lk~~G~~----~vvG~~~~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 151 LKANGIE----AVVGAGLI-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred HHHCCCC----EEEcCchH-HHHHHHhCCceEEecCH
Confidence 5556764 77899765 78999999999998765
No 263
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=60.79 E-value=13 Score=35.13 Aligned_cols=37 Identities=11% Similarity=0.222 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 188 gv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
...+.|++|+++|++++++|+ +....+..+++.+|+.
T Consensus 28 ~~~~ai~~l~~~Gi~~viaTG---R~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 28 PAAPWLTRLREAQVPVILCSS---KTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHhCCC
Confidence 356789999999999999999 4467788899999985
No 264
>PRK06769 hypothetical protein; Validated
Probab=60.30 E-value=8.7 Score=34.00 Aligned_cols=16 Identities=19% Similarity=0.345 Sum_probs=13.6
Q ss_pred CccEEEEecccccccc
Q 017067 83 RDLAVLLEVDGVLVDA 98 (378)
Q Consensus 83 ~~kaviFDlDGTLid~ 98 (378)
.+++++||.||||...
T Consensus 3 ~~~~~~~d~d~~~~~~ 18 (173)
T PRK06769 3 NIQAIFIDRDGTIGGD 18 (173)
T ss_pred CCcEEEEeCCCcccCC
Confidence 5899999999999543
No 265
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=60.22 E-value=13 Score=40.04 Aligned_cols=53 Identities=23% Similarity=0.335 Sum_probs=45.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc-ccchheeechhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEE 239 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~-~~f~~~iv~~~~ 239 (378)
++++|++.+||+++.+. +.+.|.|- +....+..+.+.+.++ .+|...|++.++
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTm---g~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTM---GTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEec---cchHHHHHHHHHhCCCCccccceEEEecC
Confidence 67999999999999987 99999999 4468999999999985 578877877765
No 266
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=59.65 E-value=7.6 Score=34.28 Aligned_cols=19 Identities=26% Similarity=0.174 Sum_probs=15.6
Q ss_pred CCccEEEEecccccccccc
Q 017067 82 PRDLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~ 100 (378)
..+++|++|+||||+....
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~ 41 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH 41 (170)
T ss_pred CCCCEEEEecCCccccCCC
Confidence 4578999999999997544
No 267
>PLN03017 trehalose-phosphatase
Probab=58.41 E-value=25 Score=35.32 Aligned_cols=14 Identities=29% Similarity=0.634 Sum_probs=11.5
Q ss_pred ccEEEEeccccccc
Q 017067 84 DLAVLLEVDGVLVD 97 (378)
Q Consensus 84 ~kaviFDlDGTLid 97 (378)
..+|++|+||||++
T Consensus 111 ~~llflD~DGTL~P 124 (366)
T PLN03017 111 QIVMFLDYDGTLSP 124 (366)
T ss_pred CeEEEEecCCcCcC
Confidence 45788899999993
No 268
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=58.32 E-value=99 Score=29.39 Aligned_cols=40 Identities=23% Similarity=0.331 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCCCcEEEEeCC---HhHHHHHHHcCCCEEEEcCCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs---~~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
++...+..++ .+++|.+ +.|+..|.+.|...|++++....
T Consensus 167 I~~I~e~~~v----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 167 LRIIIERADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred HHHHHHhCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 4444444333 3666654 57999999999999999998764
No 269
>PRK00208 thiG thiazole synthase; Reviewed
Probab=57.94 E-value=1e+02 Score=29.36 Aligned_cols=40 Identities=23% Similarity=0.323 Sum_probs=29.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCC---HhHHHHHHHcCCCEEEEcCCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs---~~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
++...+..++ .+++|-+ +.|+..|.+.|...|++++....
T Consensus 167 i~~i~e~~~v----pVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 167 LRIIIEQADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred HHHHHHhcCC----eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 4444454443 3666654 57999999999999999998764
No 270
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=56.79 E-value=9.2 Score=36.01 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=19.0
Q ss_pred ccEEEEecccccccccccchHHHHHHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQ 112 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~ 112 (378)
.+.++.|+||||++.... ....+.++++
T Consensus 2 ~~ll~sDlD~Tl~~~~~~-~~~~l~~~l~ 29 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDE-ALARLEELLE 29 (247)
T ss_dssp SEEEEEETBTTTBHCHHH-HHHHHHHHHH
T ss_pred CEEEEEECCCCCcCCCHH-HHHHHHHHHH
Confidence 467999999999943332 3455566665
No 271
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=56.37 E-value=9.5 Score=34.06 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=24.8
Q ss_pred CCccEEEEecccccccccccc---hHHHHHHHHHHcCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFG---NRQAFNVAFQKLGLD 117 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~---~~~a~~~~~~~~gl~ 117 (378)
.-+++|++|+|.||+.-.... ...+|..-+.+.|+.
T Consensus 26 ~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi~ 64 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGIK 64 (175)
T ss_pred cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCCE
Confidence 458899999999999744321 235566666666766
No 272
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=55.85 E-value=85 Score=29.98 Aligned_cols=57 Identities=18% Similarity=0.281 Sum_probs=36.3
Q ss_pred HHHHHcCCCCCcEEEEeCCHh------HHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 308 AGAEYAEKPVRNCFLIAGSQS------GVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 308 ~a~~~lgv~p~~~i~VGDs~~------Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
..+++++++ +++-=||.. =+++|.++|+++|++..+.. .-.+..++.++...+.++.
T Consensus 190 all~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp~~-------~~~~~~~v~~~~~~l~~~~ 252 (257)
T COG2099 190 ALLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIERPID-------YPAGFGDVTDLDAALAQLR 252 (257)
T ss_pred HHHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEecCCc-------CCcccchhhHHHHHHHHHH
Confidence 346677664 555555543 49999999999999998811 1234455555555555544
No 273
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=53.92 E-value=1.8e+02 Score=27.14 Aligned_cols=43 Identities=7% Similarity=0.009 Sum_probs=33.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
.+..+...++|+.+|+.|.+.+++=|-. .+-.....+++.+.+
T Consensus 92 ~E~~~~~~r~i~~Ik~~G~kaGv~lnP~-Tp~~~i~~~l~~vD~ 134 (220)
T COG0036 92 AEATEHIHRTIQLIKELGVKAGLVLNPA-TPLEALEPVLDDVDL 134 (220)
T ss_pred eccCcCHHHHHHHHHHcCCeEEEEECCC-CCHHHHHHHHhhCCE
Confidence 3466788999999999999999999976 345556666665443
No 274
>PLN02151 trehalose-phosphatase
Probab=53.02 E-value=30 Score=34.61 Aligned_cols=67 Identities=9% Similarity=-0.073 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCCCC---cEEEEeCCHhHHHHHHHcC----CCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 305 ALRAGAEYAEKPVR---NCFLIAGSQSGVAGAQRIG----MPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 305 a~~~a~~~lgv~p~---~~i~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|....++.++..-. -.+||||-.+|-.|.+.+. --.|.|..+. .-..|++.+++..++...+..|..
T Consensus 273 Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~----k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 273 ALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYA----KETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred HHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCC----CCCcceEeCCCHHHHHHHHHHHHH
Confidence 47777888876532 3799999999988877552 1234454321 112489999999999877777754
No 275
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=52.55 E-value=8.1 Score=33.97 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=13.6
Q ss_pred cEEEEecccccccccc
Q 017067 85 LAVLLEVDGVLVDAYR 100 (378)
Q Consensus 85 kaviFDlDGTLid~~~ 100 (378)
++++||.||||+++..
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 6899999999999543
No 276
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=51.01 E-value=33 Score=33.51 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=23.4
Q ss_pred CCccEEEEeccccccccccc-chHHHHHHHHHHcCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLD 117 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~-~~~~a~~~~~~~~gl~ 117 (378)
..+..++||+||||+..+.. .-...+...+...|..
T Consensus 20 ~~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~ 56 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQ 56 (306)
T ss_pred hhcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCc
Confidence 45678999999999985432 1123445556666744
No 277
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=50.53 E-value=15 Score=34.91 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=40.7
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCC--CcEEEEeCC-HhHHHHHHHcCCCEEEEc
Q 017067 292 DTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGS-QSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 292 ~kp~p~~~~~~~~a~~~a~~~lgv~p--~~~i~VGDs-~~Di~aA~~aG~~~i~v~ 344 (378)
.||+|....+. |..-++.+|++| .++-||+|. .+-..+|-..|+-+..-.
T Consensus 80 iKPsP~niQel---YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVWldG 132 (279)
T cd00733 80 IKPSPDNIQEL---YLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVWLDG 132 (279)
T ss_pred ECCCCccHHHH---HHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEEECC
Confidence 46777788888 999999999987 589999997 577888888888765533
No 278
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=50.09 E-value=1.8e+02 Score=25.66 Aligned_cols=26 Identities=23% Similarity=0.347 Sum_probs=23.1
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
++|.+.++++.+++.|+.+.+.||..
T Consensus 75 l~~~l~~li~~~~~~g~~v~i~TNg~ 100 (191)
T TIGR02495 75 LQAGLPDFLRKVRELGFEVKLDTNGS 100 (191)
T ss_pred CcHhHHHHHHHHHHCCCeEEEEeCCC
Confidence 56778999999999999999999964
No 279
>PLN02151 trehalose-phosphatase
Probab=49.83 E-value=13 Score=37.13 Aligned_cols=16 Identities=25% Similarity=0.594 Sum_probs=12.8
Q ss_pred CccEEEEecccccccc
Q 017067 83 RDLAVLLEVDGVLVDA 98 (378)
Q Consensus 83 ~~kaviFDlDGTLid~ 98 (378)
+..+++||+||||++.
T Consensus 97 ~~~ll~lDyDGTL~PI 112 (354)
T PLN02151 97 KQIVMFLDYDGTLSPI 112 (354)
T ss_pred CceEEEEecCccCCCC
Confidence 3458899999999953
No 280
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=49.41 E-value=85 Score=30.70 Aligned_cols=28 Identities=14% Similarity=0.120 Sum_probs=24.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
.-++|.+.++++.++++|..+.+.||..
T Consensus 83 PLL~pdl~eiv~~~~~~g~~v~l~TNG~ 110 (318)
T TIGR03470 83 PLLHPEIDEIVRGLVARKKFVYLCTNAL 110 (318)
T ss_pred ccccccHHHHHHHHHHcCCeEEEecCce
Confidence 3378999999999999999999999954
No 281
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=49.33 E-value=26 Score=31.33 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=29.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
+.|.+.+.|++|+++|++++++|+. ....+..+++.+
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~i~TGR---~~~~~~~~~~~~ 54 (204)
T TIGR01484 18 LSPETIEALERLREAGVKVVLVTGR---SLAEIKELLKQL 54 (204)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCC---CHHHHHHHHHhC
Confidence 4466788999999999999999994 356677777653
No 282
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=49.02 E-value=15 Score=36.15 Aligned_cols=34 Identities=21% Similarity=0.554 Sum_probs=27.3
Q ss_pred CCCcEEEEeCCH-hHHHHHH---------------HcCCCEEEEcCCCCC
Q 017067 316 PVRNCFLIAGSQ-SGVAGAQ---------------RIGMPCVVMRSSLTS 349 (378)
Q Consensus 316 ~p~~~i~VGDs~-~Di~aA~---------------~aG~~~i~v~~~~~~ 349 (378)
++....+|||.+ +|+.+|. .-||..|.|.++...
T Consensus 296 ~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 296 PIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred CcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 468999999997 6999996 667888888877543
No 283
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=48.74 E-value=13 Score=41.51 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=14.6
Q ss_pred CccEEEEeccccccccc
Q 017067 83 RDLAVLLEVDGVLVDAY 99 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~ 99 (378)
+.+++++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 46899999999999765
No 284
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=48.03 E-value=17 Score=34.62 Aligned_cols=50 Identities=14% Similarity=0.162 Sum_probs=40.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCC--CcEEEEeCC-HhHHHHHHHcCCCEEEEc
Q 017067 292 DTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGS-QSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 292 ~kp~p~~~~~~~~a~~~a~~~lgv~p--~~~i~VGDs-~~Di~aA~~aG~~~i~v~ 344 (378)
.||+|....+. |..-++.+|++| .++-||+|. .+-..+|-..|+-+..-.
T Consensus 84 lKPsP~niQel---YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVWldG 136 (283)
T PRK09348 84 LKPSPDNIQEL---YLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVWLDG 136 (283)
T ss_pred EcCCCccHHHH---HHHHHHHhCCCccccceeEeecCCCCCcccccccceEEEECC
Confidence 46777778888 999999999987 589999997 577888888888765433
No 285
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=45.91 E-value=12 Score=35.96 Aligned_cols=44 Identities=7% Similarity=-0.093 Sum_probs=32.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcC---CCEEEEcCCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG---MPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG---~~~i~v~~~~~~ 349 (378)
++..+++.+....-.++.||-.+|-.+...+. -.+|.+..+.+.
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~ 233 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQ 233 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCccc
Confidence 67777777766667999999999888877776 566666666443
No 286
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=45.69 E-value=2.8e+02 Score=27.55 Aligned_cols=39 Identities=26% Similarity=0.271 Sum_probs=29.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCC---HhHHHHHHHcCCCEEEEcCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs---~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
++...+...+ -+++|-+ +.|+..|.+.|...+.++++..
T Consensus 241 i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 241 IRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred HHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 5555666333 3667754 5899999999999999998864
No 287
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=45.17 E-value=20 Score=34.24 Aligned_cols=50 Identities=10% Similarity=0.128 Sum_probs=40.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCC--CcEEEEeCC-HhHHHHHHHcCCCEEEEc
Q 017067 292 DTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGS-QSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 292 ~kp~p~~~~~~~~a~~~a~~~lgv~p--~~~i~VGDs-~~Di~aA~~aG~~~i~v~ 344 (378)
.||+|....+. |..-++.+|++| .++-||+|. .+-..+|-..|+-+..-.
T Consensus 81 lKPsP~niQel---YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVWldG 133 (293)
T TIGR00388 81 IKPSPDNIQEL---YLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEVWLDG 133 (293)
T ss_pred ECCCCccHHHH---HHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEEECC
Confidence 46777778888 999999999987 589999997 577888888888765433
No 288
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=44.68 E-value=1.6e+02 Score=23.41 Aligned_cols=26 Identities=8% Similarity=0.019 Sum_probs=19.0
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
..++..-++....+..+.+|+..+..
T Consensus 90 ~~ii~~~~~~~~~~~l~~~g~d~vi~ 115 (116)
T PF02254_consen 90 IRIIARVNDPENAELLRQAGADHVIS 115 (116)
T ss_dssp SEEEEEESSHHHHHHHHHTT-SEEEE
T ss_pred CeEEEEECCHHHHHHHHHCCcCEEEC
Confidence 56777777777888888888877764
No 289
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=44.42 E-value=74 Score=31.31 Aligned_cols=29 Identities=14% Similarity=0.325 Sum_probs=25.5
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
..-++|.+.++++.++++|+.+.|.||..
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~ 168 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGT 168 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCC
Confidence 34478899999999999999999999964
No 290
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.63 E-value=1.8e+02 Score=28.76 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=63.3
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHH
Q 017067 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 268 (378)
Q Consensus 189 v~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~k 268 (378)
...+|.+++++|+.+.|.+- . ...+-.+++.+|+.... ++..... .+. .|
T Consensus 16 Fk~lI~elekkG~ev~iT~r-d---~~~v~~LLd~ygf~~~~----Igk~g~~---------------tl~-------~K 65 (346)
T COG1817 16 FKNLIWELEKKGHEVLITCR-D---FGVVTELLDLYGFPYKS----IGKHGGV---------------TLK-------EK 65 (346)
T ss_pred HHHHHHHHHhCCeEEEEEEe-e---cCcHHHHHHHhCCCeEe----ecccCCc---------------cHH-------HH
Confidence 47789999999988776554 2 35667889999976543 2221100 000 12
Q ss_pred H-hhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhH
Q 017067 269 A-VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (378)
Q Consensus 269 a-~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~D 329 (378)
+ .+++..+..-+++...||+..|.+-+|+ +.+..--+|++ .+++-|++.-
T Consensus 66 l~~~~eR~~~L~ki~~~~kpdv~i~~~s~~--------l~rvafgLg~p---sIi~~D~ehA 116 (346)
T COG1817 66 LLESAERVYKLSKIIAEFKPDVAIGKHSPE--------LPRVAFGLGIP---SIIFVDNEHA 116 (346)
T ss_pred HHHHHHHHHHHHHHHhhcCCceEeecCCcc--------hhhHHhhcCCc---eEEecCChhH
Confidence 2 3456677888888899999999866665 44455555543 5666676643
No 291
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=43.05 E-value=32 Score=26.37 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=35.0
Q ss_pred CCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 294 p~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
|...|+..+ ++.++|.+.+++..+..|-+...+|.-++-||-
T Consensus 23 pE~aPftAv---lkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 23 PESTPFTAV---LKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred cccCchHHH---HHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 455566655 899999999999999999888889988888883
No 292
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=41.54 E-value=17 Score=31.23 Aligned_cols=16 Identities=25% Similarity=0.461 Sum_probs=13.8
Q ss_pred cEEEEecccccccccc
Q 017067 85 LAVLLEVDGVLVDAYR 100 (378)
Q Consensus 85 kaviFDlDGTLid~~~ 100 (378)
+.+++|+||||+.+..
T Consensus 3 ~~lvldld~tl~~~~~ 18 (148)
T smart00577 3 KTLVLDLDETLVHSTH 18 (148)
T ss_pred cEEEEeCCCCeECCCC
Confidence 5789999999999853
No 293
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=41.49 E-value=97 Score=30.95 Aligned_cols=36 Identities=6% Similarity=0.015 Sum_probs=23.2
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHH--HHcCCCEEEE
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGA--QRIGMPCVVM 343 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA--~~aG~~~i~v 343 (378)
+...+++++ |+.|++|.|+..|-... -+--.+.+.|
T Consensus 90 ld~vl~~~~--~~~~i~VsDGaeDE~vlPiIqSr~~V~sV 127 (344)
T PF04123_consen 90 LDEVLSKFD--PDSAIVVSDGAEDERVLPIIQSRVPVDSV 127 (344)
T ss_pred HHHHHHhCC--CCEEEEEecChhhhhhhHhhhccCceEEE
Confidence 455566655 78999999999995443 3333444444
No 294
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=41.35 E-value=15 Score=35.88 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=14.2
Q ss_pred CccEEEEecccccccc
Q 017067 83 RDLAVLLEVDGVLVDA 98 (378)
Q Consensus 83 ~~kaviFDlDGTLid~ 98 (378)
.+|+|+||+|+||...
T Consensus 2 ~~k~~v~DlDnTlw~g 17 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGG 17 (320)
T ss_pred CeEEEEEcCCCCCCCC
Confidence 5789999999999875
No 295
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=40.61 E-value=1.3e+02 Score=29.76 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=26.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHH-HHHHcCCCEEEEcCCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVA-GAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~-aA~~aG~~~i~v~~~~~~ 349 (378)
|..+++... ++||||. +|+ -|-..|.++|.+++....
T Consensus 252 ~l~ll~~a~------~vvgdSs-GI~eEa~~lg~P~v~iR~~geR 289 (346)
T PF02350_consen 252 YLSLLKNAD------LVVGDSS-GIQEEAPSLGKPVVNIRDSGER 289 (346)
T ss_dssp HHHHHHHES------EEEESSH-HHHHHGGGGT--EEECSSS-S-
T ss_pred HHHHHhcce------EEEEcCc-cHHHHHHHhCCeEEEecCCCCC
Confidence 566666665 6899999 999 999999999999655333
No 296
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=40.43 E-value=20 Score=32.71 Aligned_cols=24 Identities=8% Similarity=0.205 Sum_probs=17.3
Q ss_pred CCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 316 PVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 316 ~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
+..++|+|+|++.....--..|++
T Consensus 128 ~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 128 SMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred CcccEEEEeCCHHHHhcCCCCccc
Confidence 778999999998765544445643
No 297
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=39.92 E-value=90 Score=33.97 Aligned_cols=138 Identities=17% Similarity=0.130 Sum_probs=75.7
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
||+.+..+.|++...-|..|-++|+ ...........++|...-. +.+.+ .++.-..+.......++.+-
T Consensus 492 pprhdsa~tirral~lGv~Vkmitg---dqlaI~keTgrrlgmgtnm----ypss~----llG~~~~~~~~~~~v~elie 560 (942)
T KOG0205|consen 492 PPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMGTNM----YPSSA----LLGLGKDGSMPGSPVDELIE 560 (942)
T ss_pred CCccchHHHHHHHHhccceeeeecc---hHHHHHHhhhhhhccccCc----CCchh----hccCCCCCCCCCCcHHHHhh
Confidence 4688899999999999999999999 3345555666667764321 11111 11111111111111111111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
||+ ++ ...+|+. =....+++.-..-.|-|.||+.||..+.+.|.+...+-
T Consensus 561 ----~ad-------------------gf----AgVfpeh---Ky~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava 610 (942)
T KOG0205|consen 561 ----KAD-------------------GF----AGVFPEH---KYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA 610 (942)
T ss_pred ----hcc-------------------Cc----cccCHHH---HHHHHHHHhhcCceecccCCCcccchhhcccccceeec
Confidence 111 11 1112222 12345666666678999999999999999998554432
Q ss_pred cCCCCCCCCCCCCcEEecCCCc
Q 017067 344 RSSLTSRAEFPSANAVMDGFGG 365 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~~l~e 365 (378)
. ..+..-..+|.|+...+-
T Consensus 611 ~---atdaar~asdiVltepgl 629 (942)
T KOG0205|consen 611 D---ATDAARSASDIVLTEPGL 629 (942)
T ss_pred c---chhhhcccccEEEcCCCc
Confidence 2 222222346888877653
No 298
>PTZ00445 p36-lilke protein; Provisional
Probab=39.58 E-value=22 Score=33.09 Aligned_cols=15 Identities=7% Similarity=0.047 Sum_probs=14.0
Q ss_pred CccEEEEeccccccc
Q 017067 83 RDLAVLLEVDGVLVD 97 (378)
Q Consensus 83 ~~kaviFDlDGTLid 97 (378)
-+|+|++|+|-||++
T Consensus 42 GIk~Va~D~DnTlI~ 56 (219)
T PTZ00445 42 GIKVIASDFDLTMIT 56 (219)
T ss_pred CCeEEEecchhhhhh
Confidence 488999999999998
No 299
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=39.33 E-value=29 Score=39.60 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCCCcE-EEEeCCHh-HHHHHHHcCCC-EEEEcC
Q 017067 304 AALRAGAEYAEKPVRNC-FLIAGSQS-GVAGAQRIGMP-CVVMRS 345 (378)
Q Consensus 304 ~a~~~a~~~lgv~p~~~-i~VGDs~~-Di~aA~~aG~~-~i~v~~ 345 (378)
.|++..+.++|++.+++ +|+||+.+ |.+.. -.|.+ +|.+..
T Consensus 959 qAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~tvi~~g 1002 (1050)
T TIGR02468 959 QALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeEEEEec
Confidence 45888999999999999 55999999 98766 44554 554443
No 300
>PRK08005 epimerase; Validated
Probab=39.06 E-value=3.1e+02 Score=25.33 Aligned_cols=35 Identities=9% Similarity=-0.096 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHH
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE 222 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~ 222 (378)
+...++|+.+|+.|.+.++.=|-. .+......++.
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~-Tp~~~i~~~l~ 127 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPA-TPLLPYRYLAL 127 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCC-CCHHHHHHHHH
Confidence 457889999999999999999965 23344444444
No 301
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=38.22 E-value=57 Score=30.10 Aligned_cols=57 Identities=12% Similarity=0.021 Sum_probs=27.5
Q ss_pred HHHHHHHHcCCC---CCcEEEEeCCHhHHHHHHHcCCC-----EEEEcCCCCCCCCCCCCcEEecC
Q 017067 305 ALRAGAEYAEKP---VRNCFLIAGSQSGVAGAQRIGMP-----CVVMRSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 305 a~~~a~~~lgv~---p~~~i~VGDs~~Di~aA~~aG~~-----~i~v~~~~~~~~~l~~ad~vi~~ 362 (378)
|.+..++.++.. +.-++++||..+|-.|.+.+.-. .|.|.+.... ..-..|.+.+++
T Consensus 169 av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~-~~~t~A~y~l~~ 233 (235)
T PF02358_consen 169 AVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVG-EKPTAASYRLDD 233 (235)
T ss_dssp HHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred HHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccc-cccccccccccc
Confidence 477788888876 88999999999999998887654 5556554321 111235665554
No 302
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=37.65 E-value=21 Score=31.72 Aligned_cols=34 Identities=24% Similarity=0.185 Sum_probs=29.5
Q ss_pred CCcchhHHHHHHHHHHHHH---cCCCCCcEEEEeCCH
Q 017067 294 SSPESLDKIVAALRAGAEY---AEKPVRNCFLIAGSQ 327 (378)
Q Consensus 294 p~p~~~~~~~~a~~~a~~~---lgv~p~~~i~VGDs~ 327 (378)
+-|.+.+++.++|+...+. +++++++++++|||.
T Consensus 44 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 44 PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred cccccccccccceeeeccccccccccccceEEeeccc
Confidence 3477888888899998888 789999999999996
No 303
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=36.53 E-value=55 Score=28.37 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=21.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
..+.+.++++.++++|+++.+.||+.
T Consensus 73 ~~~~l~~ll~~lk~~Gl~i~l~Tg~~ 98 (147)
T TIGR02826 73 NREALLSLLKIFKEKGLKTCLYTGLE 98 (147)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 33567899999999999999999953
No 304
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=36.15 E-value=23 Score=34.29 Aligned_cols=19 Identities=11% Similarity=0.277 Sum_probs=15.6
Q ss_pred CCccEEEEecccccccccc
Q 017067 82 PRDLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~ 100 (378)
..+..|+||+|.||+..+.
T Consensus 120 ~~phVIVfDlD~TLItd~~ 138 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEG 138 (297)
T ss_pred CCCcEEEEECCCcccccCC
Confidence 4566999999999997664
No 305
>PLN02887 hydrolase family protein
Probab=35.27 E-value=51 Score=35.30 Aligned_cols=41 Identities=7% Similarity=0.211 Sum_probs=34.3
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
.+-+...+.|++++++|+.++++|+ +....+..+++.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATG---R~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATG---KARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHhCcc
Confidence 3567789999999999999999999 4457777888888875
No 306
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=34.52 E-value=43 Score=31.14 Aligned_cols=39 Identities=10% Similarity=0.069 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
|...+++++++++|++++++|+ +....++.+.+.+++..
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTG---R~~~~~~~~~~~~~~~~ 62 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTG---RSPHSYKELQKQKPLLT 62 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcC---CCHHHHHHHHhcCCCCC
Confidence 3457788999999999999999 44567777777777643
No 307
>cd06831 PLPDE_III_ODC_like_AZI Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor. Antizyme inhibitor (AZI) is homologous to the fold type III PLP-dependent enzyme ODC but does not retain any decarboxylase activity. Like ODC, AZI is presumed to exist as a homodimer. Antizyme is a regulatory protein that binds directly to the ODC monomer to block its active site, leading to its degradation by the 26S proteasome. AZI binds to Antizyme with a higher affinity than ODC, preventing the formation of the Antizyme-ODC complex. Thus, AZI blocks the ability of Antizyme to promote ODC degradation, which leads to increased ODC enzymatic activity and polyamine levels. AZI also prevents the degradation of other proteins regulated by Antizyme, such as cyclin D1.
Probab=32.52 E-value=3.3e+02 Score=27.53 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=19.6
Q ss_pred HcCCCCCcEEEEeCC--HhHHHHHHHcCCCEEEEcC
Q 017067 312 YAEKPVRNCFLIAGS--QSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 312 ~lgv~p~~~i~VGDs--~~Di~aA~~aG~~~i~v~~ 345 (378)
.+|++|++++|-|-. ..+++.|.+.|+.++.+.+
T Consensus 75 ~~G~~~~~Iif~gp~K~~~~l~~a~~~Gv~~i~vDS 110 (394)
T cd06831 75 ELGVSPENIIYTNPCKQASQIKYAAKVGVNIMTCDN 110 (394)
T ss_pred hcCCCcCCEEEeCCCCCHHHHHHHHHCCCCEEEECC
Confidence 456666666665553 3466666666665554443
No 308
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=32.50 E-value=20 Score=33.11 Aligned_cols=13 Identities=31% Similarity=0.516 Sum_probs=7.9
Q ss_pred EEecccccccccc
Q 017067 88 LLEVDGVLVDAYR 100 (378)
Q Consensus 88 iFDlDGTLid~~~ 100 (378)
+||+||||.+...
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6899999998654
No 309
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=32.06 E-value=2.3e+02 Score=23.88 Aligned_cols=127 Identities=16% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCC--CchHHHHHHHHHhCccccchheeechhhH--
Q 017067 165 NVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGK--SGDRIARSVVEKLGSERISKIKIVGNEEV-- 240 (378)
Q Consensus 165 ~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~--~~~~~~~~~l~~lgi~~~f~~~iv~~~~~-- 240 (378)
.+.+...+.+.+.. ....+....+.+++.+..++|-++.++=|... ....++.......++.......+......
T Consensus 1 ~y~~~~~~~l~~v~-~~~~~~i~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 79 (138)
T PF13580_consen 1 QYFDEIQELLEAVE-ETQAEAIEKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALT 79 (138)
T ss_dssp -HHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHH
T ss_pred ChHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHh
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
...-.-....+. -+..+..+.+.|.++
T Consensus 80 ~~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~gDv 106 (138)
T PF13580_consen 80 AISNDLEYDEGF-----------------------------------------------------ARQLLALYDIRPGDV 106 (138)
T ss_dssp HHHHHTTGGGTH-----------------------------------------------------HHHHHHHTT--TT-E
T ss_pred hhhcccchhhHH-----------------------------------------------------HHHHHHHcCCCCCCE
Q ss_pred EEE----eCCHhHHHHHHHc---CCCEEEEcC
Q 017067 321 FLI----AGSQSGVAGAQRI---GMPCVVMRS 345 (378)
Q Consensus 321 i~V----GDs~~Di~aA~~a---G~~~i~v~~ 345 (378)
+++ |.+++=|++++.| ||++|.+.+
T Consensus 107 li~iS~SG~s~~vi~a~~~Ak~~G~~vIalTg 138 (138)
T PF13580_consen 107 LIVISNSGNSPNVIEAAEEAKERGMKVIALTG 138 (138)
T ss_dssp EEEEESSS-SHHHHHHHHHHHHTT-EEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEeC
No 310
>PF03671 Ufm1: Ubiquitin fold modifier 1 protein; InterPro: IPR005375 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade. There are many different E3 ligases, which are responsible for the type of ubiquitin chain formed, the specificity of the target protein, and the regulation of the ubiquitinylation process []. Ubiquitinylation is an important regulatory tool that controls the concentration of key signalling proteins, such as those involved in cell cycle control, as well as removing misfolded, damaged or mutant proteins that could be harmful to the cell. Several ubiquitin-like molecules have been discovered, such as Ufm1 (IPR005375 from INTERPRO), SUMO1 (IPR003653 from INTERPRO), NEDD8, Rad23 (IPR004806 from INTERPRO), Elongin B and Parkin (IPR003977 from INTERPRO), the latter being involved in Parkinson's disease []. Ubiquitin-like molecules (UBLs) can be divided into two subclasses: type-1 UBLs, which ligate to target proteins in a manner similar, but not identical, to the ubiquitylation pathway, such as SUMO, NEDD8, and UCRP/ISG15, and type-2 UBLs (also called UDPs, ubiquitin-domain proteins), which contain ubiquitin-like structure embedded in a variety of different classes of large proteins with apparently distinct functions, such as Rad23, Elongin B, Scythe, Parkin, and HOIL-1. This entry represents Ufm1 (ubiquitin-fold modifier), which is a ubiquitin-like protein with structural similarities to ubiquitin [, ]. Ufm1 is one of a number of ubiquitin-like modifiers that conjugate to target proteins in cells through Uba5 (E1) and Ufc1 (E2). The Ufm1-system is conserved in metazoa and plants, suggesting it has a potential role in multicellular organisms []. Human Ufm1 is synthesized as a precursor consisting of 85 amino-acid residues. Prior to activation by Uba5, the extra amino acids at the C-terminal region of Ufm1 are removed to expose Gly, which is necessary for conjugation to target molecule(s). C-terminal processing of Ufm1 requires two specific cysteine peptidases (IPR012462 from INTERPRO): UfSP1 and UfSP2; both peptidases are also able to release Ufm1 from Ufm1-conjugated cellular proteins. UfSP2 is present in most, if not all, of multi-cellular organisms including plant, nematode, fly, and mammal, whereas UfSP1 is not present in plants and nematodes []. For further information on ubiquitin, please see Protein of the Month [].; PDB: 1J0G_A 1WXS_A 1L7Y_A.
Probab=32.05 E-value=15 Score=28.06 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=25.5
Q ss_pred CCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH
Q 017067 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 294 p~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~ 331 (378)
|...|+..+ ++.++|.+.+++..|..|-+...+|-
T Consensus 23 PE~apftaV---lkfaAeeF~vp~~tsaiItndG~GIn 57 (76)
T PF03671_consen 23 PEEAPFTAV---LKFAAEEFKVPPATSAIITNDGVGIN 57 (76)
T ss_dssp ETTSBHHHH---HHHHHHHTTS-SSSEEEEESSS-EE-
T ss_pred CCCCchHHH---HHHHHHHcCCCCceEEEEecCCcccc
Confidence 555567666 89999999999999999876654443
No 311
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=31.68 E-value=70 Score=34.91 Aligned_cols=40 Identities=15% Similarity=0.087 Sum_probs=32.7
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.+...+.|+.|+++|++++++|+. ....+..+.+.+++.+
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGR---s~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAK---TMGEQDLYRNELGIKD 474 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCCCC
Confidence 345688999999999999999994 4577788888888754
No 312
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=31.33 E-value=27 Score=30.56 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=13.7
Q ss_pred cEEEEecccccccccc
Q 017067 85 LAVLLEVDGVLVDAYR 100 (378)
Q Consensus 85 kaviFDlDGTLid~~~ 100 (378)
+.+++|+|+||+-+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 4789999999998764
No 313
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=29.37 E-value=4e+02 Score=24.40 Aligned_cols=30 Identities=10% Similarity=0.027 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 336 (378)
+...++.+. ..+++-+.+|+..-+++.+..
T Consensus 123 l~~ll~~Y~-~~~eI~IYeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 123 LEDLLHTYK-NAEEIRIYEDRPKHVKGFRDF 152 (197)
T ss_pred HHHHHHhcC-CCCEEEEEcCCHHHHHHHHHH
Confidence 666777777 789999999999888877654
No 314
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=28.97 E-value=2e+02 Score=28.83 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcC--CCEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 300 DKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG--MPCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 300 ~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG--~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
+++..-+..++++.+++.+-.++-| ..+|-.++...| +++..+.-| .+..+..+-+-++.|+..+
T Consensus 269 ~~l~~~L~~~A~~~~Ip~Q~~v~~~-ggTDA~a~~~~g~gvpta~Igip----~ry~Hs~~e~~~~~D~~~~ 335 (355)
T COG1363 269 PKLRKFLLELAEKNNIPYQVDVSPG-GGTDAGAAHLTGGGVPTALIGIP----TRYIHSPVEVAHLDDLEAT 335 (355)
T ss_pred HHHHHHHHHHHHHcCCCeEEEecCC-CCccHHHHHHcCCCCceEEEecc----cccccCcceeecHHHHHHH
Confidence 4444558889999999888777765 677777777775 787777655 2233343445555555543
No 315
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=28.53 E-value=3.8e+02 Score=24.98 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=23.2
Q ss_pred EEEEeCCH---hHHHHHHHcCCCEEEEcCCCC
Q 017067 320 CFLIAGSQ---SGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 320 ~i~VGDs~---~Di~aA~~aG~~~i~v~~~~~ 348 (378)
.+.+|-+. .+++.+.++|...+++.+..-
T Consensus 187 ~i~v~gGI~~~e~i~~~~~~gaD~vvvGSai~ 218 (244)
T PRK13125 187 YLVVGFGLDSPEDARDALSAGADGVVVGTAFI 218 (244)
T ss_pred CEEEeCCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 47788766 588888899999999987643
No 316
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=28.37 E-value=41 Score=24.98 Aligned_cols=25 Identities=0% Similarity=-0.134 Sum_probs=16.0
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 334 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~ 334 (378)
.+..++++|+ .|++||..+|++...
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5777899997 799999999998764
No 317
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=27.69 E-value=1.5e+02 Score=26.63 Aligned_cols=42 Identities=17% Similarity=0.197 Sum_probs=21.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH--hHHHHHHHcCCCEEEEcCCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ--SGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~--~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
.+..++++. |+-+|+++.-. |=|..|++.|++.+.++...+.
T Consensus 87 ~~rfl~~~~--P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~ 130 (186)
T PF04413_consen 87 VRRFLDHWR--PDLLIWVETELWPNLLREAKRRGIPVVLVNARLSE 130 (186)
T ss_dssp HHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE----
T ss_pred HHHHHHHhC--CCEEEEEccccCHHHHHHHhhcCCCEEEEeeeecc
Confidence 556666665 89999999764 5688899999999999866443
No 318
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=27.68 E-value=1.2e+02 Score=30.09 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=31.3
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
..-++|++.++++.++++|+.+.+.||...-....+ ..+...|+.
T Consensus 72 EPll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~-~~L~~~g~~ 116 (378)
T PRK05301 72 EPLLRKDLEELVAHARELGLYTNLITSGVGLTEARL-AALKDAGLD 116 (378)
T ss_pred ccCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHH-HHHHHcCCC
Confidence 344688999999999999999999999652122333 344455654
No 319
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=27.51 E-value=1.1e+02 Score=29.90 Aligned_cols=72 Identities=15% Similarity=0.050 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCCCCcE-EEEeCCH----hHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCc-chHHHHHHhh
Q 017067 304 AALRAGAEYAEKPVRNC-FLIAGSQ----SGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGG-ADLTISKLRH 375 (378)
Q Consensus 304 ~a~~~a~~~lgv~p~~~-i~VGDs~----~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e-~~~~~~~l~~ 375 (378)
+|+....+..++.+.+. ++.|-+. .=|+.|+++|...|.+.+.....+.+ -.||.+++.-.+ +...+.++..
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcC
Confidence 56777777788988554 4455442 35899999998666655543322222 237888874443 4444544443
No 320
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=27.09 E-value=1.3e+02 Score=29.66 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=30.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
.-++|++.++++.++++|+.+.+.||...-.+..++ .+...|+.
T Consensus 64 Pll~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~-~L~~~g~~ 107 (358)
T TIGR02109 64 PLARPDLVELVAHARRLGLYTNLITSGVGLTEARLD-ALADAGLD 107 (358)
T ss_pred ccccccHHHHHHHHHHcCCeEEEEeCCccCCHHHHH-HHHhCCCC
Confidence 346889999999999999999999996422223333 34445554
No 321
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=26.97 E-value=4.9e+02 Score=25.79 Aligned_cols=36 Identities=8% Similarity=0.254 Sum_probs=27.9
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 190 ~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
+.++++|+++|+.+.|.+-. ...+..+++.+|++..
T Consensus 17 k~~I~eL~~~GheV~it~R~----~~~~~~LL~~yg~~y~ 52 (335)
T PF04007_consen 17 KNIIRELEKRGHEVLITARD----KDETEELLDLYGIDYI 52 (335)
T ss_pred HHHHHHHHhCCCEEEEEEec----cchHHHHHHHcCCCeE
Confidence 67899999999988877652 3567788888887653
No 322
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=26.83 E-value=57 Score=30.95 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=37.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCC--CcEEEEeCC-HhHHHHHHHcCCCEEE
Q 017067 292 DTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGS-QSGVAGAQRIGMPCVV 342 (378)
Q Consensus 292 ~kp~p~~~~~~~~a~~~a~~~lgv~p--~~~i~VGDs-~~Di~aA~~aG~~~i~ 342 (378)
.||+|....+. |..-++.+|++| .++=||+|. .|--.+|-..|+-+..
T Consensus 85 lKPsP~NiQeL---YL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWEVWl 135 (298)
T COG0752 85 IKPSPDNIQEL---YLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWEVWL 135 (298)
T ss_pred ecCCCccHHHH---HHHHHHHcCCChhhcceeeeccCCCCCcccccccceeEEE
Confidence 45667777777 999999999998 588999997 4666677777776554
No 323
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=26.46 E-value=42 Score=29.32 Aligned_cols=18 Identities=22% Similarity=0.444 Sum_probs=15.2
Q ss_pred ccEEEEeccccccccccc
Q 017067 84 DLAVLLEVDGVLVDAYRF 101 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~ 101 (378)
...+++|+|.||+.+...
T Consensus 6 kl~LVLDLDeTLihs~~~ 23 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTKD 23 (156)
T ss_pred ceEEEEeCCCCccccccc
Confidence 457999999999998764
No 324
>PRK10537 voltage-gated potassium channel; Provisional
Probab=25.70 E-value=7e+02 Score=25.26 Aligned_cols=19 Identities=11% Similarity=0.057 Sum_probs=10.2
Q ss_pred HHHHHHHHHCCCcEEEEeC
Q 017067 190 EDFVDDAYNEGIPLIVLTA 208 (378)
Q Consensus 190 ~~lL~~Lk~~G~~v~ivTn 208 (378)
..++++|+++|+++.++..
T Consensus 253 ~~v~~~L~~~g~~vvVId~ 271 (393)
T PRK10537 253 INTYLGLRQRGQAVTVIVP 271 (393)
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 4455555555555555543
No 325
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=25.67 E-value=1.1e+02 Score=27.40 Aligned_cols=23 Identities=4% Similarity=-0.051 Sum_probs=12.3
Q ss_pred HHHHHcCCCCCcEEEEeCCHhHH
Q 017067 308 AGAEYAEKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 308 ~a~~~lgv~p~~~i~VGDs~~Di 330 (378)
.-+.++|++++++.+.||-..|.
T Consensus 162 ~r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 162 ERFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp HHHHTTT-S--SEEE---GGG--
T ss_pred HHHHHcCCCcceEEEeCcchhcc
Confidence 34789999999999999987765
No 326
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=25.43 E-value=62 Score=32.75 Aligned_cols=40 Identities=13% Similarity=0.069 Sum_probs=28.2
Q ss_pred HHHHHHHc----CCCCCcEEEEeCCH-----hHHHHHHHcCCCEEEEcCCC
Q 017067 306 LRAGAEYA----EKPVRNCFLIAGSQ-----SGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 306 ~~~a~~~l----gv~p~~~i~VGDs~-----~Di~aA~~aG~~~i~v~~~~ 347 (378)
...+.+++ ++.|++|++|||.. ||.+ |+.+ ..|+||.+|.
T Consensus 354 V~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a-~~t~WIasP~ 402 (408)
T PF06437_consen 354 VRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLA-CTTAWIASPQ 402 (408)
T ss_pred HHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhh-ceeeEecCHH
Confidence 34445555 89999999999964 6664 3444 4678888873
No 327
>COG2237 Predicted membrane protein [Function unknown]
Probab=25.37 E-value=2e+02 Score=28.86 Aligned_cols=23 Identities=0% Similarity=-0.061 Sum_probs=16.5
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhHHH
Q 017067 307 RAGAEYAEKPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 307 ~~a~~~lgv~p~~~i~VGDs~~Di~ 331 (378)
...++.+ +|+.+++|.|+.-|-.
T Consensus 91 d~vl~~~--~pd~av~VsDGaeDe~ 113 (364)
T COG2237 91 DEVLSEL--DPDDAVVVSDGAEDER 113 (364)
T ss_pred HHHHHcC--CCcEEEEeccCcccch
Confidence 3334444 4888999999998843
No 328
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=25.13 E-value=1.4e+02 Score=22.60 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=29.1
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 190 ~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
.++++.++++|..+.+..- ...+..+++..|+.+.+.+
T Consensus 60 ~~l~~~~~~~g~~v~i~~~-----~~~~~~~l~~~gl~~~~~i 97 (99)
T cd07043 60 LGAYKRARAAGGRLVLVNV-----SPAVRRVLELTGLDRLFPI 97 (99)
T ss_pred HHHHHHHHHcCCeEEEEcC-----CHHHHHHHHHhCcceeeec
Confidence 5678888899987666644 3678899999998877653
No 329
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=25.10 E-value=1.9e+02 Score=27.96 Aligned_cols=50 Identities=24% Similarity=0.275 Sum_probs=36.2
Q ss_pred cchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc--CCCEEEEcCC
Q 017067 296 PESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVVMRSS 346 (378)
Q Consensus 296 p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a--G~~~i~v~~~ 346 (378)
+-+.++++..+..++++.+++.+.- ++..+.+|-.+.+.. |++++.+.-|
T Consensus 219 ~i~~~~l~~~l~~~A~~~~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP 270 (292)
T PF05343_consen 219 MIPNPKLVDKLREIAEENGIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIP 270 (292)
T ss_dssp EESHHHHHHHHHHHHHHTT--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEecc
Confidence 4456666677899999999987765 667778888888776 8888776544
No 330
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=25.10 E-value=1.3e+02 Score=29.64 Aligned_cols=24 Identities=17% Similarity=-0.006 Sum_probs=21.4
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCC
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAY 209 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~ 209 (378)
-|-+.-+++.|+++|++++|+|-.
T Consensus 51 TP~v~~L~~~L~~~G~~~~IlSRG 74 (326)
T PF02606_consen 51 TPLVIWLARLLQARGYRPAILSRG 74 (326)
T ss_pred hHHHHHHHHHHHhcCCceEEEcCC
Confidence 467899999999999999999973
No 331
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=24.99 E-value=3.4e+02 Score=21.29 Aligned_cols=34 Identities=24% Similarity=0.507 Sum_probs=25.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
.+..++.+++++++=...+ .....+..+++.+|.
T Consensus 13 ~~~~~~~~~~kivvD~~~G-~~~~~~~~ll~~lg~ 46 (104)
T PF02879_consen 13 ILEAIKKSGLKIVVDCMNG-AGSDILPRLLERLGC 46 (104)
T ss_dssp HHHHHHHTTCEEEEE-TTS-TTHHHHHHHHHHTTC
T ss_pred chhhcccCCCEEEEECCCC-HHHHHHHHHHHHcCC
Confidence 4567788899988866554 456788899999998
No 332
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=24.86 E-value=1.3e+02 Score=30.29 Aligned_cols=51 Identities=16% Similarity=0.252 Sum_probs=39.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
..-+||+.-++..+- +.+.+++.|. .....+..+++.+.+..+....++..
T Consensus 213 f~kRPgvD~FL~~~a-~~yEIVi~ss---e~gmt~~pl~d~lDP~g~IsYkLfr~ 263 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLA-KYYEIVVYSS---EQGMTVFPLLDALDPKGYISYKLFRG 263 (393)
T ss_pred eccCchHHHHHHhhc-ccceEEEEec---CCccchhhhHhhcCCcceEEEEEecC
Confidence 447999999999998 5699999999 44577778999998887766554433
No 333
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=24.82 E-value=1.3e+02 Score=27.66 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=22.2
Q ss_pred CCCC-HHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPG-VEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pg-v~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
+.++ +.++++.++++|+.+++.||..
T Consensus 51 lq~~fl~~l~~~~k~~gi~~~leTnG~ 77 (213)
T PRK10076 51 MQAEFATRFLQRLRLWGVSCAIETAGD 77 (213)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 4555 6899999999999999999954
No 334
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=24.57 E-value=64 Score=30.19 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
++++..++++.+++.|+++.+.||..
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGt 110 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGS 110 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCC
Confidence 45788999999999999999999964
No 335
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=24.25 E-value=44 Score=37.17 Aligned_cols=64 Identities=11% Similarity=-0.054 Sum_probs=40.3
Q ss_pred HHHHHHHc------CCCCCcEEEEeCCH-hHHHHHHHcCCCE--------------------------------EEEcCC
Q 017067 306 LRAGAEYA------EKPVRNCFLIAGSQ-SGVAGAQRIGMPC--------------------------------VVMRSS 346 (378)
Q Consensus 306 ~~~a~~~l------gv~p~~~i~VGDs~-~Di~aA~~aG~~~--------------------------------i~v~~~ 346 (378)
.+..++.+ +-.++-++.+||-. .|=.|.+..+-.. |.|..
T Consensus 683 v~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~- 761 (797)
T PLN03063 683 IGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ- 761 (797)
T ss_pred HHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECC-
Confidence 55556654 33577888999963 4776766554211 22221
Q ss_pred CCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 347 LTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 347 ~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
.-..|.+.+++..|+...+..|..
T Consensus 762 -----~~s~A~y~l~~~~eV~~lL~~l~~ 785 (797)
T PLN03063 762 -----ARTKARYVLDSSNDVVSLLHKLAV 785 (797)
T ss_pred -----CCccCeecCCCHHHHHHHHHHHhc
Confidence 122378999999999887777654
No 336
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=24.16 E-value=2.4e+02 Score=29.47 Aligned_cols=29 Identities=17% Similarity=0.347 Sum_probs=23.5
Q ss_pred CCcEEEEeCCHhHHHHHHHc---CCCEEEEcC
Q 017067 317 VRNCFLIAGSQSGVAGAQRI---GMPCVVMRS 345 (378)
Q Consensus 317 p~~~i~VGDs~~Di~aA~~a---G~~~i~v~~ 345 (378)
.-++++||-++.++.+|..+ |.+++++..
T Consensus 211 ~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~ 242 (517)
T PRK15317 211 PYDVLVVGGGPAGAAAAIYAARKGIRTGIVAE 242 (517)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 45899999999999887755 788888854
No 337
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=24.05 E-value=6.3e+02 Score=24.01 Aligned_cols=99 Identities=24% Similarity=0.368 Sum_probs=56.8
Q ss_pred CCCCCCHHHHHHH---HHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDD---AYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~---Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
-.++|+..++++. |.+.|+.|.-.++. +...-+.++..|-.-.-. .|.-+.++.+
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~----D~v~akrL~d~GcaavMP------------------lgsPIGSg~G 160 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTD----DPVLAKRLEDAGCAAVMP------------------LGSPIGSGRG 160 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-----HHHHHHHHHTT-SEBEE------------------BSSSTTT---
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCC----CHHHHHHHHHCCCCEEEe------------------cccccccCcC
Confidence 4478888888874 56789999999984 355556666666543211 1112222211
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC---HhHHHHHHHc
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRI 336 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs---~~Di~aA~~a 336 (378)
| -.|. .++..+++.+++ ++|+-+ ++|...|.+.
T Consensus 161 -------------------------------i--~n~~-------~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMEl 196 (247)
T PF05690_consen 161 -------------------------------I--QNPY-------NLRIIIERADVP----VIVDAGIGTPSDAAQAMEL 196 (247)
T ss_dssp -------------------------------S--STHH-------HHHHHHHHGSSS----BEEES---SHHHHHHHHHT
T ss_pred -------------------------------C--CCHH-------HHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHc
Confidence 0 0011 177778888876 556543 5899999999
Q ss_pred CCCEEEEcCCC
Q 017067 337 GMPCVVMRSSL 347 (378)
Q Consensus 337 G~~~i~v~~~~ 347 (378)
|+..|.+++..
T Consensus 197 G~daVLvNTAi 207 (247)
T PF05690_consen 197 GADAVLVNTAI 207 (247)
T ss_dssp T-SEEEESHHH
T ss_pred CCceeehhhHH
Confidence 99999998764
No 338
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=24.02 E-value=42 Score=37.96 Aligned_cols=17 Identities=12% Similarity=0.307 Sum_probs=13.9
Q ss_pred CccEEEEeccccccccc
Q 017067 83 RDLAVLLEVDGVLVDAY 99 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~ 99 (378)
..++++||+||||++..
T Consensus 590 ~~RLlfLDyDGTLap~~ 606 (934)
T PLN03064 590 NNRLLILGFNATLTEPV 606 (934)
T ss_pred cceEEEEecCceeccCC
Confidence 34789999999999853
No 339
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=23.87 E-value=50 Score=29.87 Aligned_cols=17 Identities=24% Similarity=0.284 Sum_probs=14.8
Q ss_pred ccEEEEecccccccccc
Q 017067 84 DLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~ 100 (378)
.+++++|-||||.....
T Consensus 5 ~k~lflDRDGtin~d~~ 21 (181)
T COG0241 5 QKALFLDRDGTINIDKG 21 (181)
T ss_pred CcEEEEcCCCceecCCC
Confidence 67999999999998665
No 340
>KOG3483 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.20 E-value=78 Score=24.42 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=33.7
Q ss_pred CCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 294 p~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
|..-|+..+ ++.+++.+.+++....+|-+..-+|.-|+-+|-
T Consensus 34 pestpftav---lkfaaeefkvpaatsaiitndgiginpaq~agn 75 (94)
T KOG3483|consen 34 PESTPFTAV---LKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 75 (94)
T ss_pred CCCCchHHH---HHHHHHHccCCccceeEEecCccccCccccccc
Confidence 555566666 899999999999888888877778888888883
No 341
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=22.41 E-value=1.8e+02 Score=22.80 Aligned_cols=37 Identities=22% Similarity=0.176 Sum_probs=29.7
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch
Q 017067 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (378)
Q Consensus 190 ~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~ 231 (378)
..+.++++++|.++.++.- ...++.+++..|+.+.+.
T Consensus 61 ~~~~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl~~~~~ 97 (106)
T TIGR02886 61 LGRYKKIKNEGGEVIVCNV-----SPAVKRLFELSGLFKIIR 97 (106)
T ss_pred HHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHhCCceEEE
Confidence 4577888899988887754 477889999999988774
No 342
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=22.38 E-value=7e+02 Score=23.97 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=62.7
Q ss_pred CCCCCCHHHHHHH---HHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDD---AYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~---Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
-.++|+..++++. |-+.|+.|.-.++. +..+-+.++..|-.-.-. .|.-+.++.+
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~----D~v~a~rLed~Gc~aVMP------------------lgsPIGSg~G 174 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINA----DPMLAKHLEDIGCATVMP------------------LGSPIGSGQG 174 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCC----CHHHHHHHHHcCCeEEee------------------ccCcccCCCC
Confidence 4578898888875 55789999999984 355556666666432211 1112222211
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC---HhHHHHHHHc
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRI 336 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs---~~Di~aA~~a 336 (378)
| -.|. .++...+...++ +++|-+ +.|+..|.+.
T Consensus 175 -------------------------------l--~n~~-------~l~~i~e~~~vp----VivdAGIgt~sDa~~AmEl 210 (267)
T CHL00162 175 -------------------------------L--QNLL-------NLQIIIENAKIP----VIIDAGIGTPSEASQAMEL 210 (267)
T ss_pred -------------------------------C--CCHH-------HHHHHHHcCCCc----EEEeCCcCCHHHHHHHHHc
Confidence 1 0111 155566665543 666654 5899999999
Q ss_pred CCCEEEEcCCCC
Q 017067 337 GMPCVVMRSSLT 348 (378)
Q Consensus 337 G~~~i~v~~~~~ 348 (378)
|...|+++++..
T Consensus 211 GaDgVL~nSaIa 222 (267)
T CHL00162 211 GASGVLLNTAVA 222 (267)
T ss_pred CCCEEeecceee
Confidence 999999998865
No 343
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=22.26 E-value=82 Score=31.42 Aligned_cols=22 Identities=14% Similarity=0.003 Sum_probs=18.1
Q ss_pred CCCCCccEEEEecccccccccc
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~ 100 (378)
.+...+++|-||||.||+....
T Consensus 7 l~l~~i~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 7 LNLEKIQVFGFDMDYTLAQYKS 28 (343)
T ss_pred cccccCCEEEECccccccccCh
Confidence 3456789999999999998655
No 344
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=22.13 E-value=91 Score=25.29 Aligned_cols=25 Identities=12% Similarity=0.034 Sum_probs=21.7
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
.+.+.+.++.++++|.+++.+|+..
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~ 83 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVV 83 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCC
Confidence 4568899999999999999999953
No 345
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=21.91 E-value=7.8e+02 Score=24.33 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=26.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (378)
|...+++.. ++|||+...+..|...|.++|.++.
T Consensus 275 ~l~Ll~~a~------~vitdSSggi~EA~~lg~Pvv~l~~ 308 (365)
T TIGR03568 275 YLSLLKNAD------AVIGNSSSGIIEAPSFGVPTINIGT 308 (365)
T ss_pred HHHHHHhCC------EEEEcChhHHHhhhhcCCCEEeecC
Confidence 444555555 6899998889999999999998874
No 346
>PF02091 tRNA-synt_2e: Glycyl-tRNA synthetase alpha subunit; InterPro: IPR002310 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. In eubacteria, glycyl-tRNA synthetase (6.1.1.14 from EC) is an alpha2/beta2 tetramer composed of 2 different subunits [, , ]. In some eubacteria, in archaea and eukaryota, glycyl-tRNA synthetase is an alpha2 dimer (see IPR002315 from INTERPRO). It belongs to class IIc and is one of the most complex synthetases. What is most interesting is the lack of similarity between the two types: divergence at the sequence level is so great that it is impossible to infer descent from common genes. The alpha and beta subunits (see IPR002311 from INTERPRO) also lack significant sequence similarity. However, they are translated from a single mRNA [], and a single chain glycyl-tRNA synthetase from Chlamydia trachomatis has been found to have significant similarity with both domains, suggesting divergence from a single polypeptide chain []. This entry represents the alpha subunit of glycyl-tRNA synthetase.; GO: 0000166 nucleotide binding, 0004820 glycine-tRNA ligase activity, 0005524 ATP binding, 0006426 glycyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 3RF1_A 3UFG_B 3RGL_B 1J5W_B.
Probab=21.84 E-value=86 Score=30.06 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=31.0
Q ss_pred CCCCcchhHHHHHHHHHHHHHcCCCC--CcEEEEeCC-HhHHHHHHHcCCCEE
Q 017067 292 DTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGS-QSGVAGAQRIGMPCV 341 (378)
Q Consensus 292 ~kp~p~~~~~~~~a~~~a~~~lgv~p--~~~i~VGDs-~~Di~aA~~aG~~~i 341 (378)
.||+|....+. |..-++.+|++| .++-||+|. .+-..+|-..|+-+.
T Consensus 79 lKPsP~niq~l---YL~SL~~lGId~~~hDIRFVEDnWEsPtLGAwGlGWEVW 128 (284)
T PF02091_consen 79 LKPSPDNIQEL---YLESLEALGIDPKEHDIRFVEDNWESPTLGAWGLGWEVW 128 (284)
T ss_dssp EES--TTHHHH---HHHHHHHCT--CCCS-EEEEEE-EEETTTTEEEEEEEEE
T ss_pred EcCCCccHHHH---HHHHHHHhCCCccccceeEeecCCCCCcccccccccEEE
Confidence 35667777888 999999999986 689999997 456666666665544
No 347
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Probab=21.62 E-value=2.6e+02 Score=28.38 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=31.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH--hHHHHHHHcCCCEEEEcCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ--SGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~--~Di~aA~~aG~~~i~v~~~ 346 (378)
+..+++. |++|++++|-|... .+|+.|.+.|+++|.+.+-
T Consensus 86 l~~al~a-G~~~~~I~f~g~~ks~~ei~~a~e~gi~~i~vdS~ 127 (394)
T COG0019 86 LELALAA-GFPPERIVFSGPAKSEEEIAFALELGIKLINVDSE 127 (394)
T ss_pred HHHHHHc-CCChhhEEECCCCCCHHHHHHHHHcCCcEEEeCCH
Confidence 4444444 99999999988864 5899999999998877654
No 348
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=21.60 E-value=1e+02 Score=25.08 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=22.1
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
.+.+.++++.++++|.+++.+|+..
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~ 84 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNP 84 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4678999999999999999999953
No 349
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=20.95 E-value=58 Score=32.60 Aligned_cols=16 Identities=19% Similarity=0.486 Sum_probs=13.9
Q ss_pred ccEEEEeccccccccc
Q 017067 84 DLAVLLEVDGVLVDAY 99 (378)
Q Consensus 84 ~kaviFDlDGTLid~~ 99 (378)
.++++||.||||+...
T Consensus 2 ~k~l~lDrDgtl~~~~ 17 (354)
T PRK05446 2 QKILFIDRDGTLIEEP 17 (354)
T ss_pred CcEEEEeCCCCccCCC
Confidence 5789999999999964
No 350
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=20.33 E-value=20 Score=34.35 Aligned_cols=40 Identities=25% Similarity=0.369 Sum_probs=32.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
+.-+|++.++|...-+. +.+++.|+ +....+..+++.+..
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTA---s~~~Ya~~v~D~LD~ 169 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTA---SLEVYADPLLDILDP 169 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHh---hhHHHHHHHHHHccC
Confidence 34689999999998876 88889998 446888888888776
No 351
>COG4275 Uncharacterized conserved protein [Function unknown]
Probab=20.02 E-value=55 Score=27.87 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=29.4
Q ss_pred CCCCCccEEEEecccccccccccchHHHHHHHHHHcCCC
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD 117 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~ 117 (378)
.......+|=||+||+-+..-. -+-.|...++++|++
T Consensus 40 ~~~~~fgAvpfdi~gv~~th~~--e~~sFd~~l~~fgLd 76 (143)
T COG4275 40 AVGKEFGAVPFDIDGVELTHVG--ERCSFDTMLAKFGLD 76 (143)
T ss_pred chhhhcCCcceeecceeEEeee--eeecHHHHHHHhCCC
Confidence 3345677999999999887554 357889999999998
Done!