Query 017069
Match_columns 378
No_of_seqs 220 out of 1707
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 05:20:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02851 3-hydroxyisobutyryl-C 100.0 2E-63 4.3E-68 487.3 38.6 333 32-364 40-372 (407)
2 PLN02988 3-hydroxyisobutyryl-C 100.0 3.7E-62 8.1E-67 477.1 37.5 330 35-364 10-339 (381)
3 PLN02157 3-hydroxyisobutyryl-C 100.0 5.9E-62 1.3E-66 477.2 37.9 332 33-364 36-367 (401)
4 PLN02874 3-hydroxyisobutyryl-C 100.0 1E-60 2.2E-65 468.8 37.4 333 30-364 7-339 (379)
5 PRK05617 3-hydroxyisobutyryl-C 100.0 3.7E-59 8E-64 452.6 31.9 321 35-364 4-326 (342)
6 KOG1684 Enoyl-CoA hydratase [L 100.0 2.6E-57 5.6E-62 421.2 29.2 335 27-364 31-368 (401)
7 PRK05980 enoyl-CoA hydratase; 100.0 4.2E-54 9.1E-59 403.8 28.6 256 34-361 3-260 (260)
8 KOG1680 Enoyl-CoA hydratase [L 100.0 6.8E-55 1.5E-59 393.9 20.1 251 36-364 39-290 (290)
9 PRK09076 enoyl-CoA hydratase; 100.0 1.4E-53 3E-58 399.7 29.2 254 33-363 2-257 (258)
10 PRK05862 enoyl-CoA hydratase; 100.0 1.1E-53 2.3E-58 400.4 28.0 254 33-364 3-257 (257)
11 PRK08150 enoyl-CoA hydratase; 100.0 1.7E-53 3.8E-58 398.1 28.5 252 34-363 2-254 (255)
12 PRK06142 enoyl-CoA hydratase; 100.0 1.4E-53 3E-58 402.7 28.0 259 33-363 5-272 (272)
13 PRK08140 enoyl-CoA hydratase; 100.0 2.1E-53 4.6E-58 399.5 28.5 259 33-364 3-262 (262)
14 PRK06127 enoyl-CoA hydratase; 100.0 3E-53 6.4E-58 399.7 29.2 260 31-364 8-269 (269)
15 PRK07799 enoyl-CoA hydratase; 100.0 2.9E-53 6.3E-58 398.7 28.8 259 33-364 4-263 (263)
16 PRK09245 enoyl-CoA hydratase; 100.0 2.8E-53 6.1E-58 399.5 28.3 259 33-363 2-265 (266)
17 PRK09674 enoyl-CoA hydratase-i 100.0 2.5E-53 5.3E-58 397.4 27.6 252 34-363 2-254 (255)
18 PRK08139 enoyl-CoA hydratase; 100.0 4.3E-53 9.4E-58 397.8 29.2 257 31-363 8-265 (266)
19 PRK05809 3-hydroxybutyryl-CoA 100.0 3.9E-53 8.4E-58 397.3 28.5 256 33-364 3-260 (260)
20 PRK08258 enoyl-CoA hydratase; 100.0 3.8E-53 8.3E-58 400.5 28.5 257 35-363 18-276 (277)
21 TIGR02280 PaaB1 phenylacetate 100.0 3.6E-53 7.9E-58 396.5 27.8 254 36-363 1-255 (256)
22 PRK07657 enoyl-CoA hydratase; 100.0 4.3E-53 9.2E-58 396.9 28.3 256 33-364 2-260 (260)
23 PRK07658 enoyl-CoA hydratase; 100.0 4.6E-53 1E-57 396.2 27.7 253 35-363 3-256 (257)
24 PLN02664 enoyl-CoA hydratase/d 100.0 5.1E-53 1.1E-57 399.3 28.2 256 36-363 10-274 (275)
25 PRK08138 enoyl-CoA hydratase; 100.0 7.3E-53 1.6E-57 395.5 28.5 254 32-363 5-260 (261)
26 PLN02600 enoyl-CoA hydratase 100.0 5E-53 1.1E-57 394.3 27.1 248 41-364 2-251 (251)
27 PRK06563 enoyl-CoA hydratase; 100.0 4.8E-53 1E-57 395.5 26.8 252 36-363 1-254 (255)
28 PRK08252 enoyl-CoA hydratase; 100.0 8E-53 1.7E-57 393.7 28.0 252 33-364 2-254 (254)
29 PRK05995 enoyl-CoA hydratase; 100.0 8.2E-53 1.8E-57 395.5 27.8 258 33-364 3-262 (262)
30 PRK05981 enoyl-CoA hydratase; 100.0 1E-52 2.3E-57 395.6 28.1 259 33-363 3-265 (266)
31 PRK07511 enoyl-CoA hydratase; 100.0 1.4E-52 3E-57 393.5 28.7 256 34-362 3-259 (260)
32 PRK07659 enoyl-CoA hydratase; 100.0 1.9E-52 4.1E-57 392.5 27.2 254 34-364 6-260 (260)
33 PRK06494 enoyl-CoA hydratase; 100.0 2.2E-52 4.9E-57 391.7 27.5 253 33-364 3-259 (259)
34 PRK07468 enoyl-CoA hydratase; 100.0 4E-52 8.7E-57 390.6 28.0 257 33-363 3-261 (262)
35 PRK07327 enoyl-CoA hydratase; 100.0 4.8E-52 1E-56 391.2 27.9 256 31-364 8-268 (268)
36 PRK09120 p-hydroxycinnamoyl Co 100.0 5.3E-52 1.2E-56 392.1 28.2 253 32-355 6-262 (275)
37 PRK05674 gamma-carboxygeranoyl 100.0 3.3E-52 7.2E-57 391.6 26.4 258 33-364 4-264 (265)
38 PRK06688 enoyl-CoA hydratase; 100.0 4.3E-52 9.3E-57 390.1 27.0 254 33-363 4-258 (259)
39 PRK06144 enoyl-CoA hydratase; 100.0 6.3E-52 1.4E-56 389.2 27.2 255 30-363 4-261 (262)
40 PRK06495 enoyl-CoA hydratase; 100.0 6.7E-52 1.5E-56 388.1 27.3 254 32-363 2-256 (257)
41 PRK06210 enoyl-CoA hydratase; 100.0 4.9E-52 1.1E-56 392.3 26.4 259 33-363 4-271 (272)
42 TIGR03210 badI 2-ketocyclohexa 100.0 6.6E-52 1.4E-56 387.8 26.6 252 33-363 1-255 (256)
43 TIGR01929 menB naphthoate synt 100.0 6.7E-52 1.4E-56 388.4 26.5 254 34-363 2-258 (259)
44 PRK03580 carnitinyl-CoA dehydr 100.0 9E-52 2E-56 388.1 27.1 252 34-363 3-260 (261)
45 PRK07509 enoyl-CoA hydratase; 100.0 1.3E-51 2.8E-56 387.5 27.6 257 32-363 1-262 (262)
46 PRK05864 enoyl-CoA hydratase; 100.0 1.1E-51 2.4E-56 390.4 27.2 261 32-364 7-275 (276)
47 PRK07260 enoyl-CoA hydratase; 100.0 1.1E-51 2.3E-56 386.4 26.7 252 33-355 1-253 (255)
48 PRK06143 enoyl-CoA hydratase; 100.0 1.9E-51 4E-56 384.6 26.9 246 34-355 6-254 (256)
49 PRK08260 enoyl-CoA hydratase; 100.0 2.6E-51 5.5E-56 391.5 27.8 259 33-364 3-278 (296)
50 PRK07396 dihydroxynaphthoic ac 100.0 3.5E-51 7.6E-56 386.2 27.8 256 33-364 12-269 (273)
51 PRK11423 methylmalonyl-CoA dec 100.0 2.8E-51 6.1E-56 384.5 26.6 254 33-364 3-261 (261)
52 PRK06072 enoyl-CoA hydratase; 100.0 6.7E-51 1.4E-55 379.3 28.4 247 36-364 2-248 (248)
53 TIGR03189 dienoyl_CoA_hyt cycl 100.0 6.2E-51 1.4E-55 379.9 27.0 246 36-363 3-250 (251)
54 PRK07827 enoyl-CoA hydratase; 100.0 1.2E-50 2.7E-55 380.2 28.6 256 32-362 4-259 (260)
55 PLN02888 enoyl-CoA hydratase 100.0 1.2E-50 2.5E-55 380.9 27.9 255 32-363 7-263 (265)
56 PRK08259 enoyl-CoA hydratase; 100.0 5.5E-51 1.2E-55 381.0 25.1 249 33-359 2-251 (254)
57 PRK07854 enoyl-CoA hydratase; 100.0 8.4E-51 1.8E-55 377.4 24.9 240 36-363 2-242 (243)
58 COG1024 CaiD Enoyl-CoA hydrata 100.0 1.9E-50 4.2E-55 378.4 27.3 252 33-361 4-257 (257)
59 PRK05870 enoyl-CoA hydratase; 100.0 8.1E-51 1.8E-55 379.1 24.6 246 32-354 1-248 (249)
60 PLN02921 naphthoate synthase 100.0 2.9E-50 6.2E-55 387.1 28.3 259 32-366 63-325 (327)
61 PRK06023 enoyl-CoA hydratase; 100.0 2.1E-50 4.6E-55 376.7 25.1 245 34-355 3-251 (251)
62 PF00378 ECH: Enoyl-CoA hydrat 100.0 1.7E-50 3.7E-55 376.3 23.0 244 37-355 1-245 (245)
63 PRK12478 enoyl-CoA hydratase; 100.0 3.5E-50 7.5E-55 383.4 24.6 259 33-367 4-284 (298)
64 PRK07938 enoyl-CoA hydratase; 100.0 8.7E-50 1.9E-54 371.9 26.2 242 39-359 7-249 (249)
65 PRK07112 polyketide biosynthes 100.0 1.2E-49 2.7E-54 372.2 26.8 251 33-363 3-254 (255)
66 PLN03214 probable enoyl-CoA hy 100.0 7E-50 1.5E-54 377.9 25.2 255 27-355 4-263 (278)
67 PRK08321 naphthoate synthase; 100.0 2E-49 4.4E-54 378.9 26.7 259 33-364 22-298 (302)
68 PRK07110 polyketide biosynthes 100.0 1.6E-48 3.5E-53 363.5 25.8 244 32-352 3-247 (249)
69 PRK06190 enoyl-CoA hydratase; 100.0 3.7E-48 8E-53 362.3 26.1 232 33-337 3-235 (258)
70 TIGR03222 benzo_boxC benzoyl-C 100.0 6.1E-47 1.3E-51 383.4 25.4 253 36-364 260-544 (546)
71 PRK08184 benzoyl-CoA-dihydrodi 100.0 1.1E-46 2.3E-51 382.8 24.7 257 32-364 258-548 (550)
72 PRK05869 enoyl-CoA hydratase; 100.0 3.9E-46 8.4E-51 341.4 23.0 215 32-318 1-221 (222)
73 PRK08788 enoyl-CoA hydratase; 100.0 8E-45 1.7E-49 343.3 27.7 248 34-352 17-274 (287)
74 PRK08290 enoyl-CoA hydratase; 100.0 3.8E-45 8.3E-50 347.2 24.7 235 33-336 3-257 (288)
75 KOG1679 Enoyl-CoA hydratase [L 100.0 7.7E-46 1.7E-50 321.8 16.9 260 33-364 26-291 (291)
76 PRK11730 fadB multifunctional 100.0 2.1E-44 4.6E-49 379.5 26.8 286 35-355 7-296 (715)
77 PRK08272 enoyl-CoA hydratase; 100.0 2.3E-44 4.9E-49 344.6 24.4 217 33-319 9-247 (302)
78 PRK06213 enoyl-CoA hydratase; 100.0 1.5E-44 3.2E-49 332.9 22.2 225 33-332 2-228 (229)
79 KOG1681 Enoyl-CoA isomerase [L 100.0 4.8E-45 1E-49 319.6 15.6 264 30-363 15-291 (292)
80 PRK11154 fadJ multifunctional 100.0 1.1E-42 2.3E-47 366.5 26.7 281 35-355 6-294 (708)
81 TIGR03200 dearomat_oah 6-oxocy 100.0 2.8E-42 6E-47 329.3 26.7 285 44-355 38-328 (360)
82 TIGR02440 FadJ fatty oxidation 100.0 4E-42 8.7E-47 361.4 26.0 278 38-355 5-289 (699)
83 TIGR02437 FadB fatty oxidation 100.0 4.8E-41 1E-45 353.3 28.5 287 35-355 7-297 (714)
84 KOG0016 Enoyl-CoA hydratase/is 100.0 2.2E-41 4.7E-46 303.4 20.5 252 33-355 6-262 (266)
85 PLN02267 enoyl-CoA hydratase/i 100.0 5.3E-41 1.1E-45 310.8 21.9 183 36-221 2-189 (239)
86 TIGR02441 fa_ox_alpha_mit fatt 100.0 2.2E-40 4.8E-45 349.1 27.4 294 34-355 13-321 (737)
87 COG0447 MenB Dihydroxynaphthoi 100.0 1.8E-41 3.9E-46 295.0 14.4 260 32-366 16-280 (282)
88 KOG1682 Enoyl-CoA isomerase [L 100.0 1.1E-39 2.4E-44 281.3 20.7 255 34-364 32-287 (287)
89 cd06558 crotonase-like Crotona 100.0 1.8E-38 3.9E-43 285.0 19.6 188 36-225 1-189 (195)
90 TIGR03222 benzo_boxC benzoyl-C 100.0 5E-38 1.1E-42 318.5 22.2 196 30-226 7-221 (546)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 8.4E-37 1.8E-41 310.6 22.0 193 31-224 12-223 (550)
92 cd07014 S49_SppA Signal peptid 99.8 3.3E-19 7E-24 157.9 9.5 140 61-220 22-172 (177)
93 cd07020 Clp_protease_NfeD_1 No 99.8 1.4E-18 3E-23 155.2 11.8 146 44-218 1-166 (187)
94 PF13766 ECH_C: 2-enoyl-CoA Hy 99.7 1.4E-17 3E-22 137.0 9.5 105 258-369 4-110 (118)
95 cd07019 S49_SppA_1 Signal pept 99.6 2.8E-15 6.2E-20 136.3 9.7 157 43-219 1-205 (211)
96 cd00394 Clp_protease_like Case 99.5 8.7E-14 1.9E-18 121.1 10.8 134 58-214 8-161 (161)
97 cd07022 S49_Sppa_36K_type Sign 99.5 3.1E-13 6.8E-18 123.2 12.6 95 51-166 14-109 (214)
98 cd07023 S49_Sppa_N_C Signal pe 99.4 6E-13 1.3E-17 120.9 11.3 153 44-218 2-201 (208)
99 cd07016 S14_ClpP_1 Caseinolyti 99.4 4.5E-13 9.9E-18 116.6 9.3 128 61-214 15-160 (160)
100 TIGR00705 SppA_67K signal pept 99.4 2.6E-12 5.6E-17 133.1 11.6 157 40-216 306-510 (584)
101 TIGR00706 SppA_dom signal pept 99.3 9E-12 1.9E-16 113.0 12.3 148 44-220 2-198 (207)
102 cd07021 Clp_protease_NfeD_like 99.2 6.3E-11 1.4E-15 104.7 11.2 141 44-217 1-171 (178)
103 cd07018 S49_SppA_67K_type Sign 99.2 7.2E-11 1.6E-15 108.3 9.3 142 58-220 26-216 (222)
104 cd07015 Clp_protease_NfeD Nodu 98.8 8.1E-08 1.7E-12 84.2 11.8 144 45-217 2-165 (172)
105 cd07013 S14_ClpP Caseinolytic 98.6 3.3E-07 7.1E-12 79.9 11.2 134 58-214 9-162 (162)
106 PRK00277 clpP ATP-dependent Cl 98.6 4.4E-07 9.4E-12 81.8 11.0 139 57-218 39-197 (200)
107 KOG1683 Hydroxyacyl-CoA dehydr 98.5 3.6E-08 7.8E-13 94.1 2.5 169 43-217 66-240 (380)
108 PRK12553 ATP-dependent Clp pro 98.4 1.4E-06 3.1E-11 78.9 10.4 137 57-218 43-203 (207)
109 cd07017 S14_ClpP_2 Caseinolyti 98.4 1.7E-06 3.6E-11 76.1 9.6 134 58-214 18-171 (171)
110 PRK10949 protease 4; Provision 98.4 3.7E-06 8.1E-11 87.7 13.7 157 41-220 325-532 (618)
111 PRK12319 acetyl-CoA carboxylas 98.4 1.1E-05 2.4E-10 75.1 14.6 139 55-218 76-215 (256)
112 PF00574 CLP_protease: Clp pro 98.3 2.6E-06 5.6E-11 75.6 8.9 141 47-217 19-181 (182)
113 CHL00198 accA acetyl-CoA carbo 98.3 2.4E-05 5.2E-10 74.7 15.7 139 55-218 132-271 (322)
114 PRK14512 ATP-dependent Clp pro 98.3 6.6E-06 1.4E-10 73.9 10.9 137 58-217 32-188 (197)
115 CHL00028 clpP ATP-dependent Cl 98.2 1.6E-05 3.4E-10 71.6 12.1 138 57-218 38-197 (200)
116 TIGR00513 accA acetyl-CoA carb 98.2 4.7E-05 1E-09 72.7 15.9 139 55-218 129-268 (316)
117 PLN03230 acetyl-coenzyme A car 98.2 4.4E-05 9.5E-10 74.8 15.6 138 56-218 200-338 (431)
118 TIGR00493 clpP ATP-dependent C 98.2 2.3E-05 5E-10 70.1 12.6 136 58-216 35-190 (191)
119 PLN03229 acetyl-coenzyme A car 98.2 3.7E-05 7.9E-10 79.8 15.6 138 55-217 220-358 (762)
120 PRK05724 acetyl-CoA carboxylas 98.2 4.7E-05 1E-09 72.8 14.4 140 55-218 129-268 (319)
121 TIGR03134 malonate_gamma malon 98.2 0.00028 6E-09 65.2 18.6 156 41-220 30-192 (238)
122 TIGR03133 malonate_beta malona 98.0 0.00016 3.5E-09 67.8 14.8 156 44-226 61-225 (274)
123 PRK14514 ATP-dependent Clp pro 98.0 0.00011 2.3E-09 67.0 12.7 135 57-217 62-219 (221)
124 PRK12551 ATP-dependent Clp pro 98.0 0.00011 2.4E-09 65.8 12.4 140 57-219 33-192 (196)
125 PRK14513 ATP-dependent Clp pro 98.0 9.6E-05 2.1E-09 66.4 11.6 137 57-220 35-195 (201)
126 COG0616 SppA Periplasmic serin 98.0 6.5E-05 1.4E-09 72.6 11.0 153 43-219 60-264 (317)
127 PRK11778 putative inner membra 97.9 6.6E-05 1.4E-09 72.3 10.4 156 41-220 89-289 (330)
128 PRK07189 malonate decarboxylas 97.9 0.00055 1.2E-08 65.1 15.3 150 44-219 70-228 (301)
129 PRK05654 acetyl-CoA carboxylas 97.7 0.00097 2.1E-08 63.4 14.5 152 40-222 118-271 (292)
130 TIGR00515 accD acetyl-CoA carb 97.7 0.00094 2E-08 63.3 14.0 151 41-222 118-270 (285)
131 COG1030 NfeD Membrane-bound se 97.6 0.0013 2.8E-08 65.0 13.6 148 40-217 24-188 (436)
132 CHL00174 accD acetyl-CoA carbo 97.6 0.0011 2.3E-08 62.9 12.4 148 44-222 135-284 (296)
133 PF01972 SDH_sah: Serine dehyd 97.3 0.0024 5.3E-08 59.3 10.2 111 37-176 54-164 (285)
134 PF01343 Peptidase_S49: Peptid 97.3 0.00027 5.8E-09 61.0 3.8 94 127-220 3-143 (154)
135 TIGR01117 mmdA methylmalonyl-C 97.2 0.01 2.2E-07 61.1 15.6 153 48-222 320-486 (512)
136 PF01039 Carboxyl_trans: Carbo 97.2 0.0055 1.2E-07 62.9 13.5 139 44-219 59-207 (493)
137 TIGR00705 SppA_67K signal pept 97.2 0.003 6.5E-08 66.1 11.6 85 61-165 76-160 (584)
138 COG0740 ClpP Protease subunit 97.2 0.0041 8.8E-08 55.5 10.7 98 122-220 77-195 (200)
139 PRK12552 ATP-dependent Clp pro 97.0 0.013 2.9E-07 53.3 12.2 141 59-218 50-215 (222)
140 TIGR01117 mmdA methylmalonyl-C 96.7 0.019 4.1E-07 59.1 11.9 139 44-219 84-230 (512)
141 COG0825 AccA Acetyl-CoA carbox 96.5 0.0025 5.4E-08 59.4 4.0 89 120-217 178-266 (317)
142 PLN02820 3-methylcrotonyl-CoA 96.5 0.046 9.9E-07 56.8 13.5 143 44-219 131-281 (569)
143 PRK10949 protease 4; Provision 96.4 0.042 9.1E-07 57.8 12.9 85 61-165 95-179 (618)
144 COG0777 AccD Acetyl-CoA carbox 96.4 0.058 1.3E-06 50.1 11.8 147 44-221 124-271 (294)
145 PF01039 Carboxyl_trans: Carbo 94.5 0.4 8.7E-06 49.3 11.7 154 47-222 298-469 (493)
146 PLN02157 3-hydroxyisobutyryl-C 94.0 0.092 2E-06 52.4 5.6 66 293-364 228-296 (401)
147 COG4799 Acetyl-CoA carboxylase 93.7 0.31 6.7E-06 49.8 8.7 102 44-161 93-194 (526)
148 PLN02820 3-methylcrotonyl-CoA 92.9 3.2 6.9E-05 43.4 14.9 143 56-220 380-543 (569)
149 KOG0840 ATP-dependent Clp prot 92.0 0.72 1.6E-05 42.6 7.7 133 57-217 100-257 (275)
150 COG4799 Acetyl-CoA carboxylase 89.5 5 0.00011 41.2 11.9 152 47-220 328-497 (526)
151 KOG0540 3-Methylcrotonyl-CoA c 73.7 30 0.00065 34.8 9.9 147 47-220 353-510 (536)
152 PF02601 Exonuc_VII_L: Exonucl 65.8 11 0.00025 36.2 5.3 80 59-160 53-135 (319)
153 TIGR00237 xseA exodeoxyribonuc 65.0 12 0.00025 38.0 5.3 80 59-160 168-247 (432)
154 COG0074 SucD Succinyl-CoA synt 60.1 24 0.00053 33.4 6.0 52 67-142 189-240 (293)
155 smart00250 PLEC Plectin repeat 56.4 9 0.0002 24.4 1.8 18 196-213 18-35 (38)
156 PTZ00187 succinyl-CoA syntheta 55.9 32 0.00069 33.3 6.3 53 66-142 212-264 (317)
157 PF13607 Succ_CoA_lig: Succiny 51.1 40 0.00086 28.3 5.5 51 65-140 41-91 (138)
158 PF00681 Plectin: Plectin repe 49.5 6.1 0.00013 26.3 0.2 19 195-213 17-35 (45)
159 TIGR00377 ant_ant_sig anti-ant 47.0 67 0.0014 24.9 6.0 49 35-88 4-52 (108)
160 PF00549 Ligase_CoA: CoA-ligas 46.9 42 0.00091 28.8 5.0 62 65-143 60-121 (153)
161 PF06833 MdcE: Malonate decarb 46.9 26 0.00057 32.2 4.0 146 55-220 40-190 (234)
162 PRK00286 xseA exodeoxyribonucl 45.7 31 0.00067 34.8 4.7 78 59-160 174-252 (438)
163 COG1570 XseA Exonuclease VII, 44.0 48 0.001 33.5 5.6 58 60-137 175-232 (440)
164 PLN02522 ATP citrate (pro-S)-l 40.4 75 0.0016 33.6 6.6 52 66-142 210-262 (608)
165 PF14842 FliG_N: FliG N-termin 36.3 44 0.00095 26.7 3.3 85 190-281 12-100 (108)
166 TIGR02886 spore_II_AA anti-sig 36.2 1.6E+02 0.0035 22.7 6.7 47 37-88 2-48 (106)
167 COG0528 PyrH Uridylate kinase 35.7 1E+02 0.0023 28.4 6.0 54 32-91 4-57 (238)
168 KOG1255 Succinyl-CoA synthetas 30.3 1.3E+02 0.0028 28.0 5.5 55 66-141 219-273 (329)
169 PF01740 STAS: STAS domain; I 30.2 2.1E+02 0.0045 22.5 6.5 48 36-88 2-57 (117)
170 PF00191 Annexin: Annexin; In 30.1 1.3E+02 0.0028 21.1 4.7 36 294-329 20-55 (66)
171 PLN00125 Succinyl-CoA ligase [ 29.9 1.2E+02 0.0027 29.0 5.8 12 130-141 233-244 (300)
172 PF06258 Mito_fiss_Elm1: Mitoc 29.2 5E+02 0.011 24.9 9.9 132 30-168 95-245 (311)
173 PRK06091 membrane protein FdrA 25.8 1.8E+02 0.0039 30.4 6.5 22 121-142 270-291 (555)
174 PRK14556 pyrH uridylate kinase 24.9 1.9E+02 0.0041 27.0 5.9 55 33-93 15-69 (249)
175 PRK13505 formate--tetrahydrofo 24.5 1.4E+02 0.003 31.2 5.3 71 77-151 323-393 (557)
176 COG3660 Predicted nucleoside-d 23.0 6.7E+02 0.014 23.9 10.2 134 32-167 109-260 (329)
177 smart00870 Asparaginase Aspara 23.0 3E+02 0.0065 26.5 7.2 31 56-86 55-85 (323)
178 PF03464 eRF1_2: eRF1 domain 2 22.1 1.4E+02 0.0031 24.5 4.2 45 44-88 25-83 (133)
179 COG0252 AnsB L-asparaginase/ar 21.5 2.6E+02 0.0057 27.4 6.4 31 56-86 78-108 (351)
180 smart00463 SMR Small MutS-rela 21.2 1.9E+02 0.0041 21.3 4.3 31 60-90 12-43 (80)
181 cd04241 AAK_FomA-like AAK_FomA 20.4 1.9E+02 0.0041 26.5 5.1 37 51-90 13-49 (252)
182 TIGR02153 gatD_arch glutamyl-t 20.2 3.4E+02 0.0073 27.2 7.0 33 56-88 118-150 (404)
No 1
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2e-63 Score=487.32 Aligned_cols=333 Identities=68% Similarity=1.149 Sum_probs=299.6
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
..+.|.++..+++++||||||++.|+||.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|++++......+..+.
T Consensus 40 ~~~~v~~e~~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~ 119 (407)
T PLN02851 40 LQDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEE 119 (407)
T ss_pred CCCCeEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHH
Confidence 45568899999999999999999999999999999999999999999999999999999999999999865332222344
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHH
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 191 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~ 191 (378)
...++...+.+.+.+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|+|++|..+.
T Consensus 120 ~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g~ 199 (407)
T PLN02851 120 CKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGE 199 (407)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHHH
Confidence 55677778888899999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|++||++++|+||+++||+++++|+++++.+.+.+.++...++..+...+++|.....++......+...|++||+.++
T Consensus 200 ~L~LTG~~i~a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~s 279 (407)
T PLN02851 200 YLALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDT 279 (407)
T ss_pred HHHHhCCcCCHHHHHHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999888888888877788888999999976543344556667899999999999
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+++|+++|+....+..++|+++.++.|.+.||.|+++|+++++++...++.++++.|+++..+++....++||.|||+|.
T Consensus 280 v~~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~ 359 (407)
T PLN02851 280 VEEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRAR 359 (407)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 99999999975443457999999999999999999999999999999999999999999999887312379999999999
Q ss_pred hcCCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPFH 364 (378)
Q Consensus 352 l~ek~r~P~~~~~ 364 (378)
||+|+++|+|+++
T Consensus 360 LIDKd~~P~W~p~ 372 (407)
T PLN02851 360 LVDKDFAPKWDPP 372 (407)
T ss_pred hcCCCCCCCCCCC
Confidence 9999999999986
No 2
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=3.7e-62 Score=477.15 Aligned_cols=330 Identities=49% Similarity=0.824 Sum_probs=290.8
Q ss_pred ceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHH
Q 017069 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (378)
Q Consensus 35 ~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (378)
.|.++.+++|++||||||++.|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++......+.......
T Consensus 10 ~v~~~~~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~ 89 (381)
T PLN02988 10 QVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGAN 89 (381)
T ss_pred ceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHH
Confidence 57888899999999999999999999999999999999999999999999999999999999998763222221122233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHH
Q 017069 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA 194 (378)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ 194 (378)
++...+.+.+.+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|+|++|..+.+|+
T Consensus 90 ~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~ 169 (381)
T PLN02988 90 FFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVG 169 (381)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence 44444556778899999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 274 (378)
+||++++|+||+++||||++||++++++....++++...++..+...++.+.............++..|++||+.+++++
T Consensus 170 LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~ 249 (381)
T PLN02988 170 LTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEE 249 (381)
T ss_pred HcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999988888887777788888888888876543233455667999999999999999
Q ss_pred HHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcC
Q 017069 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVD 354 (378)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~e 354 (378)
|+++|+....+...+|+++.++.|.+.||.|+++|+++++++...++.++++.|+++..+++....++||.|||+|.|++
T Consensus 250 i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiD 329 (381)
T PLN02988 250 IISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVD 329 (381)
T ss_pred HHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcC
Confidence 99999975332357999999999999999999999999999999999999999999999988511149999999999999
Q ss_pred CCCCCCCCCC
Q 017069 355 RDIAPKVPFH 364 (378)
Q Consensus 355 k~r~P~~~~~ 364 (378)
|+++|+|+++
T Consensus 330 Kd~~P~W~p~ 339 (381)
T PLN02988 330 KDKNPKWEPR 339 (381)
T ss_pred CCCCCCCCCC
Confidence 9999999976
No 3
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=5.9e-62 Score=477.19 Aligned_cols=332 Identities=70% Similarity=1.138 Sum_probs=292.1
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
.+.|.++.+++|++||||||++.|+||.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|++++......+.....
T Consensus 36 ~~~V~~e~~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~ 115 (401)
T PLN02157 36 DYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAI 115 (401)
T ss_pred CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence 66688999999999999999999999999999999999999999999999999999999999999988643222222223
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~ 192 (378)
..++...+.+.+.|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+.+
T Consensus 116 ~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~ 195 (401)
T PLN02157 116 REFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEY 195 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHH
Confidence 44555566678889999999999999999999999999999999999999999999999999999999999999966999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
|++||++++|+||+++||||++||++++++..+.++++...++..+...++.+.....+...........|+.||+.+++
T Consensus 196 L~LTG~~i~A~eA~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~ 275 (401)
T PLN02157 196 LGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTV 275 (401)
T ss_pred HHHcCCcCCHHHHHHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999999999997777777777788888888888777654333334455568899999999999
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
+|++++|+........+|+++.++.|.+.||.|++++.++++++...++.++++.|+++..+++....++||.|||+|.|
T Consensus 276 ~ei~~al~~~~~kr~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~L 355 (401)
T PLN02157 276 EEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARL 355 (401)
T ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 99999998654444679999999999999999999999999999999999999999999998874112599999999999
Q ss_pred cCCCCCCCCCCC
Q 017069 353 VDRDIAPKVPFH 364 (378)
Q Consensus 353 ~ek~r~P~~~~~ 364 (378)
++|+++|+|+++
T Consensus 356 iDKd~~P~W~p~ 367 (401)
T PLN02157 356 IDKDEAPKWDPP 367 (401)
T ss_pred cCCCCCCCCCCC
Confidence 999999999976
No 4
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1e-60 Score=468.79 Aligned_cols=333 Identities=44% Similarity=0.759 Sum_probs=292.2
Q ss_pred ccCCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCCh
Q 017069 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 109 (378)
Q Consensus 30 ~~~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~ 109 (378)
.+.++.+.++.+++|++||||||++.|+||.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++...... .
T Consensus 7 ~~~~~~v~~~~~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~ 84 (379)
T PLN02874 7 NPAEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--D 84 (379)
T ss_pred CCCCCceEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--c
Confidence 34566789999999999999999999999999999999999999999999999999999999999999987532111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH
Q 017069 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (378)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (378)
.....++..++.+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 85 ~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~ 164 (379)
T PLN02874 85 DSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHL 164 (379)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHH
Confidence 12223344455667789999999999999999999999999999999999999999999999999999999999999966
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+.+|++||++++|+||+++|||++|||+++++++..++.++...+...++.++++|...............+.|..||+.
T Consensus 165 a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~ 244 (379)
T PLN02874 165 GEYLALTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSK 244 (379)
T ss_pred HHHHHHcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCC
Confidence 99999999999999999999999999998887766677777777788889999888765444455666678999999999
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
+++.++++.|++..++..++||.+++++|+++||.|++.+|++++++...++.++++.|+......+....++||+|||+
T Consensus 245 ~~~~eii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~ 324 (379)
T PLN02874 245 DTVEEIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIR 324 (379)
T ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccc
Confidence 99999999999877666789999999999999999999999999998888999999999888776653223799999999
Q ss_pred hhhcCCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPFH 364 (378)
Q Consensus 350 afl~ek~r~P~~~~~ 364 (378)
+|+++|+|+|+|+++
T Consensus 325 AflidK~r~P~w~~~ 339 (379)
T PLN02874 325 ALVIDKDNAPKWNPS 339 (379)
T ss_pred eEEEcCCCCCCCCCC
Confidence 998788799999987
No 5
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=3.7e-59 Score=452.60 Aligned_cols=321 Identities=40% Similarity=0.674 Sum_probs=280.1
Q ss_pred ceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHHHH
Q 017069 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 35 ~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++.............
T Consensus 4 ~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (342)
T PRK05617 4 EVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAAD 83 (342)
T ss_pred eEEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhHH
Confidence 588999999999999999999999999999999999999999999999999999 9999999999876432111111111
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFL 193 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l 193 (378)
.++.....++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..|++|
T Consensus 84 ~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~l 163 (342)
T PRK05617 84 RFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYL 163 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHH
Confidence 34444557888899999999999999999999999999999999999999999999999999999999999988449999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCC-CHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD-DPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 194 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
++||+.++|+||+++|||++|+|+++++...+.+.+.... +.+.++..+.+|...... ..+......|++||+..++
T Consensus 164 lltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~ 241 (342)
T PRK05617 164 ALTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPA--SELAAQRAWIDECFAGDTV 241 (342)
T ss_pred HHcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCc--chhHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999998887655555544433 344667777777776433 3667789999999999999
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
++|+++|++. .++||.+++++|+++||.+++.+|+++++....+++++++.|.+.+...+. ++|++||+++|+
T Consensus 242 ~~~~~~l~~~----~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~egv~afl 314 (342)
T PRK05617 242 EDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVEGVRAVL 314 (342)
T ss_pred HHHHHHHHhc----cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh---CCchhhccceEE
Confidence 9999999987 358999999999999999999999999998888999999999999998887 999999999997
Q ss_pred cCCCCCCCCCCC
Q 017069 353 VDRDIAPKVPFH 364 (378)
Q Consensus 353 ~ek~r~P~~~~~ 364 (378)
++|+|+|+|+++
T Consensus 315 ~ek~r~p~~~~~ 326 (342)
T PRK05617 315 IDKDRNPKWSPA 326 (342)
T ss_pred EcCCCCCCCCCC
Confidence 566589999987
No 6
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-57 Score=421.15 Aligned_cols=335 Identities=51% Similarity=0.820 Sum_probs=311.4
Q ss_pred CccccCCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhc
Q 017069 27 SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 105 (378)
Q Consensus 27 ~~~~~~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~ 105 (378)
....+....|.++..+...+||||||+..||||.+|+..+.-.|..++.++.+++||+.|.| ++||+|+|+........
T Consensus 31 ~~~~~~~~~VL~e~~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~ 110 (401)
T KOG1684|consen 31 SVSTDSKDQVLVEGKGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIK 110 (401)
T ss_pred ccccccCCceEEecCCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhh
Confidence 34445668899999999999999999999999999999999999999999999999999996 99999999998877766
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhc
Q 017069 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (378)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ 185 (378)
++.......++...+.+...+.++.||.||.++|..+|||.+|+..--||||+|++.|.+||..+|++|+.|++++++|+
T Consensus 111 d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrl 190 (401)
T KOG1684|consen 111 DKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRL 190 (401)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhC
Confidence 77777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCH-HHHHHHHHHhccccCCCCchhhhHHHHHH
Q 017069 186 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDP-SVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (378)
Q Consensus 186 ~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (378)
.|..+.|+.|||.++++.||+..||.++.|+++++..++++|...+..++ +.+.+.+++|+....++.......++.|+
T Consensus 191 pg~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~ 270 (401)
T KOG1684|consen 191 PGYLGLYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVIN 270 (401)
T ss_pred ccHHHHhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHH
Confidence 99779999999999999999999999999999999999999984444444 78999999999998777777778899999
Q ss_pred HhcCCCCHHHHHHHHHhh-ccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCc
Q 017069 265 KCFGLDTVEEIIDSLESE-ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (378)
Q Consensus 265 ~~f~~~~~~~i~~~l~~~-~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 343 (378)
.||+.++++||+++|+.. ......+||++.++.|.+.||.|+++|.+.++++...++++++..|+++..+... +.|
T Consensus 271 ~~Fs~~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~---~~D 347 (401)
T KOG1684|consen 271 KCFSANTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLM---RGD 347 (401)
T ss_pred HhhccccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh---ccc
Confidence 999999999999988542 2456779999999999999999999999999999999999999999999999887 999
Q ss_pred HHhhHhhhhcCCCCCCCCCCC
Q 017069 344 FYEGVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 344 ~~egv~afl~ek~r~P~~~~~ 364 (378)
|.||++|.|++|+++|+|++.
T Consensus 348 F~EGvRA~LIDKd~~PKW~p~ 368 (401)
T KOG1684|consen 348 FCEGVRAVLIDKDQNPKWDPA 368 (401)
T ss_pred hhhhhhheeecCCcCCCCCCc
Confidence 999999999999999999986
No 7
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.2e-54 Score=403.82 Aligned_cols=256 Identities=29% Similarity=0.400 Sum_probs=229.8
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
+.|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++............
T Consensus 3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK05980 3 DTVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVAL 82 (260)
T ss_pred ceEEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhH
Confidence 4688999999999999999999999999999999999999999999999999999 799999999987542111112223
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+...++.++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 162 (260)
T PRK05980 83 RDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRAL 162 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHH
Confidence 44555566788899999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|++++|+||+++||||+|+|++++++.
T Consensus 163 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~------------------------------------------------ 194 (260)
T PRK05980 163 ELLLTGDAFSAERALEIGLVNAVVPHEELLPA------------------------------------------------ 194 (260)
T ss_pred HHHHcCCccCHHHHHHcCCCCcccCHHHHHHH------------------------------------------------
Confidence 99999999999999999999999998776432
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+.++++++++.+|.+++.+|++++.....++.++++.|...+...+. ++|+++|+++|
T Consensus 195 -------------------a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 252 (260)
T PRK05980 195 -------------------ARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG---SADLREGLAAW 252 (260)
T ss_pred -------------------HHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 22358899999999999999999998888999999999999998887 99999999999
Q ss_pred hcCCCCCCCC
Q 017069 352 MVDRDIAPKV 361 (378)
Q Consensus 352 l~ek~r~P~~ 361 (378)
+ +| |+|+|
T Consensus 253 ~-~k-r~p~~ 260 (260)
T PRK05980 253 I-ER-RRPAY 260 (260)
T ss_pred h-cc-CCCCC
Confidence 9 88 89998
No 8
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=6.8e-55 Score=393.95 Aligned_cols=251 Identities=27% Similarity=0.349 Sum_probs=224.2
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
.....+++|+.||||||+++|+++..++.||.+++..++.|++++++||||.|+.||+|+|++++.......- .
T Consensus 39 ~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~~------~ 112 (290)
T KOG1680|consen 39 ELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQDV------S 112 (290)
T ss_pred EEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcccccc------c
Confidence 3445577999999999999999999999999999999999999999999999999999999999875311111 1
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHH
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (378)
...+.+.+..+.+.+||+||+|||+|+|||++|+++||+|||+++|+|++|+.++|++|.+|++.+|+|.+|.. |++++
T Consensus 113 ~~~~~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~ 192 (290)
T KOG1680|consen 113 DGIFLRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMI 192 (290)
T ss_pred cccccchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHH
Confidence 11122334445589999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 274 (378)
+||++++|+||+++|||++|||.+++. .++.
T Consensus 193 ltg~~~~AqeA~~~GlVn~Vvp~~~~l--~eAv----------------------------------------------- 223 (290)
T KOG1680|consen 193 LTGRRLGAQEAKKIGLVNKVVPSGDAL--GEAV----------------------------------------------- 223 (290)
T ss_pred HhcCcccHHHHHhCCceeEeecchhHH--HHHH-----------------------------------------------
Confidence 999999999999999999999998863 2322
Q ss_pred HHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcC
Q 017069 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVD 354 (378)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~e 354 (378)
+++.+|+++||.+++..|+.++.+.+.++.+++..|..++...+. .+|..|||.+|. +
T Consensus 224 ------------------~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~---~~d~~Eg~~~f~-~ 281 (290)
T KOG1680|consen 224 ------------------KLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFA---TEDRLEGMTAFA-E 281 (290)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhh---hHHHHHHHHHhc-c
Confidence 368999999999999999999999999999999999999999998 999999999998 8
Q ss_pred CCCCCCCCCC
Q 017069 355 RDIAPKVPFH 364 (378)
Q Consensus 355 k~r~P~~~~~ 364 (378)
| |+|+|+.+
T Consensus 282 k-r~~~~~k~ 290 (290)
T KOG1680|consen 282 K-RKPKFSKK 290 (290)
T ss_pred c-CCcccccC
Confidence 8 99999864
No 9
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-53 Score=399.73 Aligned_cols=254 Identities=21% Similarity=0.274 Sum_probs=228.7
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
+..+.++++++|++||||||++ |++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++... +...
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~~ 76 (258)
T PRK09076 2 MIELDLEIDGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKAV 76 (258)
T ss_pred ceEEEEEEECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----Chhh
Confidence 4568899999999999999985 999999999999999999999999999999999 789999999987531 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
...+...+..++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a 156 (258)
T PRK09076 77 AREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWA 156 (258)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 233444556788889999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++++++|+.++|+||+++||||+|+|++++.+.
T Consensus 157 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~----------------------------------------------- 189 (258)
T PRK09076 157 KRMILCGERVDAATALRIGLVEEVVEKGEAREA----------------------------------------------- 189 (258)
T ss_pred HHHHHcCCcCCHHHHHHCCCCceecCchhHHHH-----------------------------------------------
Confidence 999999999999999999999999998876431
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+.+++++|+..+|.+++.+|++++.....++.+.++.|...+..++. ++|++||+++
T Consensus 190 --------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~a 246 (258)
T PRK09076 190 --------------------ALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD---TEDQREGVNA 246 (258)
T ss_pred --------------------HHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHH
Confidence 22368899999999999999999988878899999999999988887 9999999999
Q ss_pred hhcCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPF 363 (378)
Q Consensus 351 fl~ek~r~P~~~~ 363 (378)
|+ +| |+|+|++
T Consensus 247 f~-~k-r~p~~~~ 257 (258)
T PRK09076 247 FL-EK-RAPQWKN 257 (258)
T ss_pred Hh-cC-CCCCCCC
Confidence 99 88 8999975
No 10
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-53 Score=400.36 Aligned_cols=254 Identities=25% Similarity=0.347 Sum_probs=227.9
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++... .. .
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~----~~--~ 76 (257)
T PRK05862 3 YETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL----SF--M 76 (257)
T ss_pred CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc----ch--h
Confidence 34688999999999999999999999999999999999999999999999999999999999999987532 11 1
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+...+..++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.
T Consensus 77 ~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 156 (257)
T PRK05862 77 DVYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAM 156 (257)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHH
Confidence 11223344567889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|+++|+.++|+||+++||||+|+|++++++..
T Consensus 157 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 189 (257)
T PRK05862 157 DLCLTGRMMDAAEAERAGLVSRVVPADKLLDEA----------------------------------------------- 189 (257)
T ss_pred HHHHhCCccCHHHHHHcCCCCEeeCHhHHHHHH-----------------------------------------------
Confidence 999999999999999999999999987764322
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
.++++++++.+|.++..+|++++.....++.++++.|.+.+..++. ++|+++|+++|
T Consensus 190 --------------------~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~~~~e~i~af 246 (257)
T PRK05862 190 --------------------LAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA---TEDQKEGMAAF 246 (257)
T ss_pred --------------------HHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 2358889999999999999999998888999999999999988887 99999999999
Q ss_pred hcCCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPFH 364 (378)
Q Consensus 352 l~ek~r~P~~~~~ 364 (378)
+ +| |+|+|+++
T Consensus 247 ~-~k-r~p~~~~~ 257 (257)
T PRK05862 247 V-EK-RKPVFKHR 257 (257)
T ss_pred h-cc-CCCCCCCC
Confidence 9 88 89999863
No 11
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-53 Score=398.10 Aligned_cols=252 Identities=26% Similarity=0.255 Sum_probs=226.1
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
+.|.++.+++|++||||||++.|+||.+|+.+|.++++.++ +++++|||||.|++||+|+|++++... ......
T Consensus 2 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~ 75 (255)
T PRK08150 2 SLVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGM 75 (255)
T ss_pred ceEEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHH
Confidence 46788999999999999999999999999999999999997 789999999999999999999987532 111122
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
.+...++.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~ 155 (255)
T PRK08150 76 HHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTD 155 (255)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 3345566788889999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
|++||+.++|+||+++||||+|||++++.+..
T Consensus 156 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------------ 187 (255)
T PRK08150 156 MMLTGRVYDAQEGERLGLAQYLVPAGEALDKA------------------------------------------------ 187 (255)
T ss_pred HHHcCCcCCHHHHHHcCCccEeeCchHHHHHH------------------------------------------------
Confidence 99999999999999999999999988774322
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
.+++++|++.+|.+++.+|++++.....++++.++.|.+.+...+. ++|++||+++|+
T Consensus 188 -------------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ 245 (255)
T PRK08150 188 -------------------MELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQS---APEAKERLRAFL 245 (255)
T ss_pred -------------------HHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh
Confidence 2368999999999999999999988888899999999888877776 999999999999
Q ss_pred cCCCCCCCCCC
Q 017069 353 VDRDIAPKVPF 363 (378)
Q Consensus 353 ~ek~r~P~~~~ 363 (378)
+| |+|+|++
T Consensus 246 -~k-r~p~~~~ 254 (255)
T PRK08150 246 -EK-KAAKVKP 254 (255)
T ss_pred -cc-CCCCCCC
Confidence 88 8999965
No 12
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-53 Score=402.74 Aligned_cols=259 Identities=24% Similarity=0.298 Sum_probs=230.5
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhc-------
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN------- 105 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~------- 105 (378)
++.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++.....
T Consensus 5 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~ 84 (272)
T PRK06142 5 YESFTVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGL 84 (272)
T ss_pred cceEEEEecCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhccccccccc
Confidence 4568999999999999999999999999999999999999999999999999999999999999998754210
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhc
Q 017069 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (378)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ 185 (378)
.........+...+++++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 164 (272)
T PRK06142 85 ARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRI 164 (272)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHH
Confidence 01112233344556778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHH-HHHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHH
Q 017069 186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV 263 (378)
Q Consensus 186 ~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (378)
+|.. +++|+++|++++|+||+++||||+|+|+ +++.+.
T Consensus 165 ~G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~~---------------------------------------- 204 (272)
T PRK06142 165 IGDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLAA---------------------------------------- 204 (272)
T ss_pred hCHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHHH----------------------------------------
Confidence 9999 9999999999999999999999999996 555421
Q ss_pred HHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCc
Q 017069 264 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (378)
Q Consensus 264 ~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 343 (378)
+.+++++|++.||.+++.+|+++++....++.++++.|...+..++. ++|
T Consensus 205 ---------------------------a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~---~~d 254 (272)
T PRK06142 205 ---------------------------AHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP---SKD 254 (272)
T ss_pred ---------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---Ccc
Confidence 22368899999999999999999988888899999999999988887 999
Q ss_pred HHhhHhhhhcCCCCCCCCCC
Q 017069 344 FYEGVRARMVDRDIAPKVPF 363 (378)
Q Consensus 344 ~~egv~afl~ek~r~P~~~~ 363 (378)
++|||++|+ +| |+|+|++
T Consensus 255 ~~egv~af~-~k-r~p~~~~ 272 (272)
T PRK06142 255 LTEAIAAHM-EK-RPPEFTG 272 (272)
T ss_pred HHHHHHHHh-cC-CCCCCCC
Confidence 999999999 88 8999964
No 13
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-53 Score=399.49 Aligned_cols=259 Identities=24% Similarity=0.322 Sum_probs=227.9
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.+++++++ |+++++|||+|.|++||+|+|++++............
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 81 (262)
T PRK08140 3 YETILLAIEAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLG 81 (262)
T ss_pred CceEEEEeECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhH
Confidence 456899999999999999999999999999999999999999 9999999999999999999999987532100111111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~ 161 (262)
T PRK08140 82 ESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARAL 161 (262)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHH
Confidence 12222345577889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|+++|++++|+||+++||||+|||++++.+ +
T Consensus 162 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~---------------------------------------------- 193 (262)
T PRK08140 162 GLALLGEKLSAEQAEQWGLIWRVVDDAALAD--E---------------------------------------------- 193 (262)
T ss_pred HHHHcCCCcCHHHHHHcCCccEeeChHHHHH--H----------------------------------------------
Confidence 9999999999999999999999999877643 2
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+.+++++|++.+|.+++.+|++++.....++.++++.|...+..++. ++|++||+++|
T Consensus 194 -------------------a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 251 (262)
T PRK08140 194 -------------------AQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR---SADYAEGVSAF 251 (262)
T ss_pred -------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 22368999999999999999999988888999999999999888887 99999999999
Q ss_pred hcCCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPFH 364 (378)
Q Consensus 352 l~ek~r~P~~~~~ 364 (378)
+ +| |+|.|+++
T Consensus 252 ~-~k-r~p~~~~~ 262 (262)
T PRK08140 252 L-EK-RAPRFTGR 262 (262)
T ss_pred h-cC-CCCCCCCC
Confidence 9 88 89999753
No 14
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-53 Score=399.67 Aligned_cols=260 Identities=22% Similarity=0.309 Sum_probs=232.5
Q ss_pred cCCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCCh
Q 017069 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKL 109 (378)
Q Consensus 31 ~~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~ 109 (378)
...+.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus 8 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~~ 85 (269)
T PRK06127 8 SPTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SDA 85 (269)
T ss_pred CCCCceEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cch
Confidence 3455689999999999999999999999999999999999999999999999999998 7999999999875321 112
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH
Q 017069 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (378)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (378)
+....+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 86 ~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 165 (269)
T PRK06127 86 EAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPS 165 (269)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHH
Confidence 22334445566788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcC
Q 017069 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (378)
Q Consensus 190 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 268 (378)
+.++++||++++|+||+++||||+|||++++++...
T Consensus 166 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 202 (269)
T PRK06127 166 AAKDLFYTARRFDAAEALRIGLVHRVTAADDLETALA------------------------------------------- 202 (269)
T ss_pred HHHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999877643222
Q ss_pred CCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhH
Q 017069 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGV 348 (378)
Q Consensus 269 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv 348 (378)
++++++++.+|.+++.+|++++.....++++.++.|...+..++. ++|++||+
T Consensus 203 ------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~ 255 (269)
T PRK06127 203 ------------------------DYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD---SEDYREGR 255 (269)
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---ChHHHHHH
Confidence 368899999999999999999998888899999999999888887 99999999
Q ss_pred hhhhcCCCCCCCCCCC
Q 017069 349 RARMVDRDIAPKVPFH 364 (378)
Q Consensus 349 ~afl~ek~r~P~~~~~ 364 (378)
.+|+ +| |+|+|+++
T Consensus 256 ~af~-ek-r~p~~~~~ 269 (269)
T PRK06127 256 AAFM-EK-RKPVFKGR 269 (269)
T ss_pred HHHh-cC-CCCCCCCC
Confidence 9999 88 89999763
No 15
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-53 Score=398.68 Aligned_cols=259 Identities=25% Similarity=0.304 Sum_probs=225.7
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++............
T Consensus 4 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (263)
T PRK07799 4 GPHALVEQRGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDG 83 (263)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccchhhhh
Confidence 45689999999999999999999999999999999999999999999999999999999999999987642111010000
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
......+..+ ..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 84 ~~~~~~~~~~-~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 162 (263)
T PRK07799 84 SYDPSRIDAL-LKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVAC 162 (263)
T ss_pred hhhhhHHHHH-HHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 0001122223 346789999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|++||++++|+||+++||||+|||++++.+ +++
T Consensus 163 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------- 196 (263)
T PRK07799 163 DLLLTGRHITAAEAKEIGLIGHVVPDGQALD--KAL-------------------------------------------- 196 (263)
T ss_pred HHHHcCCCCCHHHHHHcCCccEecCcchHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999887643 222
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+++++|++.||.+++.+|++++.....++.++++.|.+.+..++. ++|+++|+++|
T Consensus 197 ---------------------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af 252 (263)
T PRK07799 197 ---------------------ELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL---SEDAKEGPRAF 252 (263)
T ss_pred ---------------------HHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHH
Confidence 358899999999999999999998888899999999999988887 99999999999
Q ss_pred hcCCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPFH 364 (378)
Q Consensus 352 l~ek~r~P~~~~~ 364 (378)
+ +| |+|+|.++
T Consensus 253 ~-~~-r~p~~~~~ 263 (263)
T PRK07799 253 A-EK-RAPNFQGR 263 (263)
T ss_pred H-cc-CCCCCCCC
Confidence 9 88 89999764
No 16
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-53 Score=399.52 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=228.7
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhcc--CCh
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ--GKL 109 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~-~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~--~~~ 109 (378)
.+.+.++++++|++||||||++.|++|. +|+.+|.++++.++.|+++++|||+|.|++||+|.|++++...... ...
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (266)
T PRK09245 2 TDFLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSP 81 (266)
T ss_pred CCceEEEEECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccc
Confidence 3468999999999999999999999995 9999999999999999999999999999999999999987542110 011
Q ss_pred HH-HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchH
Q 017069 110 EE-CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (378)
Q Consensus 110 ~~-~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (378)
.. ...+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~ 161 (266)
T PRK09245 82 ADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGM 161 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhH
Confidence 11 12233345667888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhc
Q 017069 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (378)
Q Consensus 189 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 267 (378)
. +++|+++|++++|+||+++||||+|+|++++++..
T Consensus 162 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a------------------------------------------- 198 (266)
T PRK09245 162 ARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAA------------------------------------------- 198 (266)
T ss_pred HHHHHHHHcCCCcCHHHHHHcCCcceecCHHHHHHHH-------------------------------------------
Confidence 9 99999999999999999999999999987764322
Q ss_pred CCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhh
Q 017069 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEG 347 (378)
Q Consensus 268 ~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~eg 347 (378)
.+++++|++.||.+++.+|++++.....++++.++.|...+..++. ++|++||
T Consensus 199 ------------------------~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg 251 (266)
T PRK09245 199 ------------------------RALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHH---TADHREA 251 (266)
T ss_pred ------------------------HHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHhHHHH
Confidence 2368999999999999999999998888899999999988888876 9999999
Q ss_pred HhhhhcCCCCCCCCCC
Q 017069 348 VRARMVDRDIAPKVPF 363 (378)
Q Consensus 348 v~afl~ek~r~P~~~~ 363 (378)
+++|+ +| |+|.|++
T Consensus 252 ~~af~-~k-r~p~~~~ 265 (266)
T PRK09245 252 VDAFL-EK-RPPVFTG 265 (266)
T ss_pred HHHHH-cC-CCCCCCC
Confidence 99999 88 8999975
No 17
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=2.5e-53 Score=397.35 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=227.3
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
..|.++++++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++... +. ..
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~--~~ 75 (255)
T PRK09674 2 SELLVSRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK----DL--AA 75 (255)
T ss_pred ceEEEEeECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc----ch--hh
Confidence 3578889999999999999999999999999999999999999999999999999999999999987531 11 11
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
.+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~ 155 (255)
T PRK09674 76 TLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQ 155 (255)
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 1223345677889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
++++|+.++|+||+++||||+|+|++++.+ .
T Consensus 156 l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~--~----------------------------------------------- 186 (255)
T PRK09674 156 MVLTGESITAQQAQQAGLVSEVFPPELTLE--R----------------------------------------------- 186 (255)
T ss_pred HHHcCCccCHHHHHHcCCCcEecChHHHHH--H-----------------------------------------------
Confidence 999999999999999999999999877642 1
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
+.+++++|+..||.+++.+|+.++.....++.++++.|.+.+..++. ++|+++|+++|+
T Consensus 187 ------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~i~af~ 245 (255)
T PRK09674 187 ------------------ALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA---TEDRHEGISAFL 245 (255)
T ss_pred ------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh
Confidence 22368999999999999999999998888999999999999988887 999999999999
Q ss_pred cCCCCCCCCCC
Q 017069 353 VDRDIAPKVPF 363 (378)
Q Consensus 353 ~ek~r~P~~~~ 363 (378)
+| |+|+|.+
T Consensus 246 -~k-r~p~~~~ 254 (255)
T PRK09674 246 -EK-RTPDFKG 254 (255)
T ss_pred -cc-CCCCCCC
Confidence 88 8999975
No 18
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=4.3e-53 Score=397.79 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=230.3
Q ss_pred cCCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChH
Q 017069 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (378)
Q Consensus 31 ~~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (378)
...+.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++... ...+
T Consensus 8 ~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~ 84 (266)
T PRK08139 8 TEAPLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLA 84 (266)
T ss_pred ccCCceEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchh
Confidence 3456889999999999999999999999999999999999999999999999999999999999999987532 1122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-
Q 017069 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (378)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (378)
....++..+.+++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++ +++|++++|..
T Consensus 85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~ 163 (266)
T PRK08139 85 YFRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQ 163 (266)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHH
Confidence 2334455667788899999999999999999999999999999999999999999999999999765 56899999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+++|+++|++++|+||+++||||+|+|++++++..
T Consensus 164 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a--------------------------------------------- 198 (266)
T PRK08139 164 AMEMLLTGEFIDAATAREWGLVNRVVPADALDAAV--------------------------------------------- 198 (266)
T ss_pred HHHHHHcCCccCHHHHHHcCCccEeeChhHHHHHH---------------------------------------------
Confidence 99999999999999999999999999987774322
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
.+++++|++.+|.+++.+|+++++....+++++++.|.+.+..++. ++|+++|++
T Consensus 199 ----------------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~ 253 (266)
T PRK08139 199 ----------------------ARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM---AEDAEEGID 253 (266)
T ss_pred ----------------------HHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CchHHHHHH
Confidence 2358999999999999999999998888999999999999888887 999999999
Q ss_pred hhhcCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPF 363 (378)
Q Consensus 350 afl~ek~r~P~~~~ 363 (378)
+|+ +| |+|+|.+
T Consensus 254 af~-~k-r~p~~~~ 265 (266)
T PRK08139 254 AFL-EK-RPPEWRG 265 (266)
T ss_pred HHh-cC-CCCCCCC
Confidence 999 88 8999975
No 19
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=3.9e-53 Score=397.26 Aligned_cols=256 Identities=27% Similarity=0.377 Sum_probs=231.3
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... ....
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~ 78 (260)
T PRK05809 3 LKNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEE 78 (260)
T ss_pred cceEEEEEeCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHH
Confidence 46788999999999999999999999999999999999999999999999999999 999999999987532 1122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
...+......++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 158 (260)
T PRK05809 79 GRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKA 158 (260)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 233444456788899999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
.+|+++|+.++|+||+++||||+|+|++++.+
T Consensus 159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~------------------------------------------------ 190 (260)
T PRK05809 159 KELIYTGDMINAEEALRIGLVNKVVEPEKLME------------------------------------------------ 190 (260)
T ss_pred HHHHHhCCCCCHHHHHHcCCCCcccChHHHHH------------------------------------------------
Confidence 99999999999999999999999999876642
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
.+.++++++++.+|.+++.+|+.++.....++.++++.|.+.+..++. ++|++||+++
T Consensus 191 -------------------~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~a 248 (260)
T PRK05809 191 -------------------EAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS---TEDQTEGMTA 248 (260)
T ss_pred -------------------HHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 223468899999999999999999998888999999999999999987 9999999999
Q ss_pred hhcCCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPFH 364 (378)
Q Consensus 351 fl~ek~r~P~~~~~ 364 (378)
|+ +| |+|+|.++
T Consensus 249 f~-~~-r~p~~~~~ 260 (260)
T PRK05809 249 FV-EK-REKNFKNK 260 (260)
T ss_pred Hh-cC-CCCCCCCC
Confidence 99 88 89999763
No 20
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.8e-53 Score=400.55 Aligned_cols=257 Identities=21% Similarity=0.270 Sum_probs=229.5
Q ss_pred ceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHH
Q 017069 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (378)
Q Consensus 35 ~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (378)
.+.++.+++|++||||||++.|+++.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.......+......
T Consensus 18 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~ 97 (277)
T PRK08258 18 HFLWEVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLA 97 (277)
T ss_pred ceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999998743211112222334
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccC-CcchHHHHhhcchHH-HHH
Q 017069 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p-~~g~~~~l~r~~g~~-a~~ 192 (378)
+...+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. +++
T Consensus 98 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~ 177 (277)
T PRK08258 98 FTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASE 177 (277)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHH
Confidence 445556788899999999999999999999999999999999999999999999999995 778999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
|+++|++++|+||+++||||+|+|++++++.
T Consensus 178 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~------------------------------------------------- 208 (277)
T PRK08258 178 LLYTGRSMSAEEGERWGFFNRLVEPEELLAE------------------------------------------------- 208 (277)
T ss_pred HHHcCCCCCHHHHHHcCCCcEecCHHHHHHH-------------------------------------------------
Confidence 9999999999999999999999998776432
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
+.+++++|++.||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+
T Consensus 209 ------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ 267 (277)
T PRK08258 209 ------------------AQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ---TEDFRRAYEAFV 267 (277)
T ss_pred ------------------HHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh
Confidence 22368899999999999999999998888899999999999988887 999999999999
Q ss_pred cCCCCCCCCCC
Q 017069 353 VDRDIAPKVPF 363 (378)
Q Consensus 353 ~ek~r~P~~~~ 363 (378)
+| |+|+|++
T Consensus 268 -ek-r~p~~~~ 276 (277)
T PRK08258 268 -AK-RKPVFEG 276 (277)
T ss_pred -cC-CCCCCCC
Confidence 88 8999975
No 21
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=3.6e-53 Score=396.52 Aligned_cols=254 Identities=25% Similarity=0.319 Sum_probs=225.0
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+ +++|||||.|++||+|+|++++..... ...+....+
T Consensus 1 ~~~e~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~ 78 (256)
T TIGR02280 1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTPG-GAPDLGRTI 78 (256)
T ss_pred CeEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhccc-cchhHHHHH
Confidence 467889999999999999999999999999999999999998 999999999999999999998753211 111111122
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHH
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (378)
...+..++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 79 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~ 158 (256)
T TIGR02280 79 ETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLA 158 (256)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 22335677889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 274 (378)
++|++++|+||+++||||+|+|++++++.
T Consensus 159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~--------------------------------------------------- 187 (256)
T TIGR02280 159 MLGEKLDARTAASWGLIWQVVDDAALMDE--------------------------------------------------- 187 (256)
T ss_pred HcCCCCCHHHHHHcCCcceeeChHHHHHH---------------------------------------------------
Confidence 99999999999999999999998776431
Q ss_pred HHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcC
Q 017069 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVD 354 (378)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~e 354 (378)
+.+++++|++.||.+++.+|+.++......+.++++.|...+..++. ++|+++|+++|+ +
T Consensus 188 ----------------a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~ 247 (256)
T TIGR02280 188 ----------------AQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR---SADYAEGVTAFL-D 247 (256)
T ss_pred ----------------HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHH-c
Confidence 22368899999999999999999988888899999999999988887 999999999999 8
Q ss_pred CCCCCCCCC
Q 017069 355 RDIAPKVPF 363 (378)
Q Consensus 355 k~r~P~~~~ 363 (378)
| |+|+|++
T Consensus 248 k-r~p~~~~ 255 (256)
T TIGR02280 248 K-RNPQFTG 255 (256)
T ss_pred C-CCCCCCC
Confidence 8 8999975
No 22
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-53 Score=396.92 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=231.0
Q ss_pred CCceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChH
Q 017069 33 CNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE 110 (378)
Q Consensus 33 ~~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~ 110 (378)
.+.|.+++ +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... +..
T Consensus 2 ~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~~ 77 (260)
T PRK07657 2 LQNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NEE 77 (260)
T ss_pred CceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----Chh
Confidence 35788886 789999999999999999999999999999999999999999999999 599999999987531 122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-
Q 017069 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (378)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (378)
....+...++.++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~ 157 (260)
T PRK07657 78 QVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGR 157 (260)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHH
Confidence 3344555667788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+.+++++|++++|+||+++||||+++|++++++.
T Consensus 158 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~---------------------------------------------- 191 (260)
T PRK07657 158 AKELIYTGRRISAQEAKEIGLVEFVVPAHLLEEK---------------------------------------------- 191 (260)
T ss_pred HHHHHHhCCCCCHHHHHHcCCCCeecCHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999998776432
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
+.+++++|+..+|.+++.+|+.++.....++.++++.|...+..++. ++|++||++
T Consensus 192 ---------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~ 247 (260)
T PRK07657 192 ---------------------AIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP---TKDRLEGLQ 247 (260)
T ss_pred ---------------------HHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHhHHHHHH
Confidence 22368899999999999999999998888899999999999988887 999999999
Q ss_pred hhhcCCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPFH 364 (378)
Q Consensus 350 afl~ek~r~P~~~~~ 364 (378)
+|+ +| |+|+|+++
T Consensus 248 af~-~~-r~~~~~~~ 260 (260)
T PRK07657 248 AFK-EK-RKPMYKGE 260 (260)
T ss_pred HHh-cC-CCCCCCCC
Confidence 999 88 89999753
No 23
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-53 Score=396.18 Aligned_cols=253 Identities=24% Similarity=0.324 Sum_probs=228.4
Q ss_pred ceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHH
Q 017069 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (378)
Q Consensus 35 ~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (378)
.+.++.+++|++||||||++ |++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++... ........
T Consensus 3 ~i~~~~~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~~ 78 (257)
T PRK07658 3 FLSVRVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV---TEAEQATE 78 (257)
T ss_pred eEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcc---CchhhHHH
Confidence 67889999999999999985 999999999999999999999999999999999999999999987532 11122233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHH
Q 017069 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (378)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l 193 (378)
+......++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|
T Consensus 79 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 158 (257)
T PRK07658 79 LAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEM 158 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHH
Confidence 445566788899999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHH
Q 017069 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273 (378)
Q Consensus 194 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 273 (378)
+++|++++|+||+++||||+|+|++++.+.
T Consensus 159 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~-------------------------------------------------- 188 (257)
T PRK07658 159 MLTSEPITGAEALKWGLVNGVFPEETLLDD-------------------------------------------------- 188 (257)
T ss_pred HHcCCCcCHHHHHHcCCcCeecChhHHHHH--------------------------------------------------
Confidence 999999999999999999999998776431
Q ss_pred HHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhc
Q 017069 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMV 353 (378)
Q Consensus 274 ~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ 353 (378)
+.+++++|++.+|.+++.+|++++.....++++.++.|...+..++. ++|+++|+++|+
T Consensus 189 -----------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~- 247 (257)
T PRK07658 189 -----------------AKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT---SEDAKEGVQAFL- 247 (257)
T ss_pred -----------------HHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHH-
Confidence 22368899999999999999999988888899999999999998887 999999999999
Q ss_pred CCCCCCCCCC
Q 017069 354 DRDIAPKVPF 363 (378)
Q Consensus 354 ek~r~P~~~~ 363 (378)
+| |+|+|++
T Consensus 248 ~k-r~p~~~~ 256 (257)
T PRK07658 248 EK-RKPSFSG 256 (257)
T ss_pred cC-CCCCCCC
Confidence 88 8999975
No 24
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=5.1e-53 Score=399.27 Aligned_cols=256 Identities=23% Similarity=0.302 Sum_probs=225.8
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccC---C----
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---K---- 108 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~---~---- 108 (378)
+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++....... .
T Consensus 10 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 89 (275)
T PLN02664 10 IQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRS 89 (275)
T ss_pred EEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhh
Confidence 445568999999999999999999999999999999999999999999999999999999999875421100 1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchH
Q 017069 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (378)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (378)
......+...+++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 169 (275)
T PLN02664 90 GERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGY 169 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCH
Confidence 11223334455678888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHh
Q 017069 189 L-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (378)
Q Consensus 189 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (378)
. ++++++||+.++|+||+++||||+|||+ +++++.
T Consensus 170 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~------------------------------------------- 206 (275)
T PLN02664 170 GNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDEG------------------------------------------- 206 (275)
T ss_pred HHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHHHH-------------------------------------------
Confidence 9 9999999999999999999999999995 555321
Q ss_pred cCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHh
Q 017069 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (378)
Q Consensus 267 f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 346 (378)
+.+++++|++.+|.+++.+|++++.....++.++++.|...+..++. ++|++|
T Consensus 207 ------------------------~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 259 (275)
T PLN02664 207 ------------------------VRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLV---SDDLNE 259 (275)
T ss_pred ------------------------HHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc---ChhHHH
Confidence 22368999999999999999999988888999999999988888776 999999
Q ss_pred hHhhhhcCCCCCCCCCC
Q 017069 347 GVRARMVDRDIAPKVPF 363 (378)
Q Consensus 347 gv~afl~ek~r~P~~~~ 363 (378)
|+++|+ +| |+|.|.+
T Consensus 260 g~~af~-ek-r~p~~~~ 274 (275)
T PLN02664 260 AVSAQI-QK-RKPVFAK 274 (275)
T ss_pred HHHHHh-cc-CCCCCCC
Confidence 999999 88 8999975
No 25
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.3e-53 Score=395.46 Aligned_cols=254 Identities=26% Similarity=0.370 Sum_probs=227.9
Q ss_pred CCCceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChH
Q 017069 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (378)
Q Consensus 32 ~~~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (378)
..+.+.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++... ..
T Consensus 5 ~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~-- 79 (261)
T PRK08138 5 ATDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---GA-- 79 (261)
T ss_pred CCCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---ch--
Confidence 345678887 789999999999999999999999999999999999999999999999999999999987531 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-
Q 017069 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (378)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (378)
...+...++.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 80 -~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 158 (261)
T PRK08138 80 -IEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFK 158 (261)
T ss_pred -hHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHH
Confidence 112334456778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+.+|+++|+.++|+||+++||||+|+|++++.+ ++
T Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a------------------------------------------- 193 (261)
T PRK08138 159 AMRMALTGCMVPAPEALAIGLVSEVVEDEQTLP--RA------------------------------------------- 193 (261)
T ss_pred HHHHHHcCCCCCHHHHHHCCCCcEecCchHHHH--HH-------------------------------------------
Confidence 999999999999999999999999999877643 21
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
.++++++++.+|.+++.+|++++.....++.+++..|.+.+..++. ++|+++|++
T Consensus 194 ----------------------~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~ 248 (261)
T PRK08138 194 ----------------------LELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD---SEDQKEGMD 248 (261)
T ss_pred ----------------------HHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 1357888999999999999999988888899999999999998887 999999999
Q ss_pred hhhcCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPF 363 (378)
Q Consensus 350 afl~ek~r~P~~~~ 363 (378)
+|+ +| |+|+|++
T Consensus 249 af~-~k-r~~~~~~ 260 (261)
T PRK08138 249 AFL-EK-RKPAYKG 260 (261)
T ss_pred HHh-cC-CCCCCCC
Confidence 999 88 8999975
No 26
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=5e-53 Score=394.28 Aligned_cols=248 Identities=24% Similarity=0.340 Sum_probs=224.7
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHHHHHHHHHH
Q 017069 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (378)
Q Consensus 41 ~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (378)
+++|++||||||++.|+||.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++... .......+...+
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~ 77 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSL 77 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999984 899999999987531 122233455556
Q ss_pred HHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCC
Q 017069 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA 198 (378)
Q Consensus 120 ~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~ 198 (378)
..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||+
T Consensus 78 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~ 157 (251)
T PLN02600 78 RSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGR 157 (251)
T ss_pred HHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCC
Confidence 7788889999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHHHHHH
Q 017069 199 KLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDS 278 (378)
Q Consensus 199 ~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~ 278 (378)
.++|+||+++||||+|+|++++.+ +
T Consensus 158 ~~~a~eA~~~Glv~~vv~~~~~~~--~----------------------------------------------------- 182 (251)
T PLN02600 158 RIGAREAASMGLVNYCVPAGEAYE--K----------------------------------------------------- 182 (251)
T ss_pred ccCHHHHHHcCCCcEeeChhHHHH--H-----------------------------------------------------
Confidence 999999999999999999887642 2
Q ss_pred HHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcCCCCC
Q 017069 279 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVDRDIA 358 (378)
Q Consensus 279 l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ek~r~ 358 (378)
+.+++++|++.+|.+++.+|++++.....++.+.++.|...+..++. ++|++||+++|+ +| |+
T Consensus 183 ------------a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-ek-r~ 245 (251)
T PLN02600 183 ------------ALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK---TKDRLEGLAAFA-EK-RK 245 (251)
T ss_pred ------------HHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHh-cC-CC
Confidence 22368999999999999999999988888999999999999999887 999999999999 88 89
Q ss_pred CCCCCC
Q 017069 359 PKVPFH 364 (378)
Q Consensus 359 P~~~~~ 364 (378)
|+|+++
T Consensus 246 p~~~~~ 251 (251)
T PLN02600 246 PVYTGK 251 (251)
T ss_pred CCCCCC
Confidence 999763
No 27
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.8e-53 Score=395.49 Aligned_cols=252 Identities=21% Similarity=0.211 Sum_probs=221.8
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
|.++.+++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++........ ..+
T Consensus 1 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~----~~~ 76 (255)
T PRK06563 1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGG----FPF 76 (255)
T ss_pred CeEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccch----hhh
Confidence 4678899999999999999999999999999999999999999999999999999999999998754211111 111
Q ss_pred HHHHHH-HHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHH
Q 017069 116 FRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (378)
Q Consensus 116 ~~~~~~-l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l 193 (378)
...... +...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++
T Consensus 77 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 156 (255)
T PRK06563 77 PEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRY 156 (255)
T ss_pred hhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHH
Confidence 111122 23357899999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHH
Q 017069 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273 (378)
Q Consensus 194 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 273 (378)
++||+.++|+||+++||||+|+|++++.+ ++
T Consensus 157 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a----------------------------------------------- 187 (255)
T PRK06563 157 LLTGDEFDAQEALRLGLVQEVVPPGEQLE--RA----------------------------------------------- 187 (255)
T ss_pred HHcCCCcCHHHHHHcCCCcEeeCHHHHHH--HH-----------------------------------------------
Confidence 99999999999999999999999877642 22
Q ss_pred HHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhc
Q 017069 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMV 353 (378)
Q Consensus 274 ~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ 353 (378)
.+++++|++.+|.+++.+|++++.....++.++++.|...+..++. ++|++||+++|+
T Consensus 188 ------------------~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~- 245 (255)
T PRK06563 188 ------------------IELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT---SEDAKEGVQAFL- 245 (255)
T ss_pred ------------------HHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-
Confidence 2358899999999999999999988888999999999999888887 999999999999
Q ss_pred CCCCCCCCCC
Q 017069 354 DRDIAPKVPF 363 (378)
Q Consensus 354 ek~r~P~~~~ 363 (378)
+| |+|+|++
T Consensus 246 ~k-r~p~~~~ 254 (255)
T PRK06563 246 ER-RPARFKG 254 (255)
T ss_pred cC-CCCCCCC
Confidence 88 8999975
No 28
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-53 Score=393.67 Aligned_cols=252 Identities=23% Similarity=0.281 Sum_probs=222.8
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++++++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++... .....
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~- 77 (254)
T PRK08252 2 SDEVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG---ERPSI- 77 (254)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc---cchhh-
Confidence 45688999999999999999999999999999999999999999999999999999999999999987632 11111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
....+..++ ...+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 78 --~~~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 153 (254)
T PRK08252 78 --PGRGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAM 153 (254)
T ss_pred --hHHHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHH
Confidence 111122222 1479999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|++++|+||+++||||+|+|++++.+
T Consensus 154 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~------------------------------------------------- 184 (254)
T PRK08252 154 ELALTGDMLTAERAHELGLVNRLTEPGQALD------------------------------------------------- 184 (254)
T ss_pred HHHHcCCccCHHHHHHcCCcceecCcchHHH-------------------------------------------------
Confidence 9999999999999999999999999887643
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
.+.++++++++.||.+++.+|++++.....++.++++.|...+..++. ++|++||+.+|
T Consensus 185 ------------------~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~eg~~af 243 (254)
T PRK08252 185 ------------------AALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT---SADAKEGATAF 243 (254)
T ss_pred ------------------HHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHH
Confidence 122368899999999999999999988888899999999999888887 99999999999
Q ss_pred hcCCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPFH 364 (378)
Q Consensus 352 l~ek~r~P~~~~~ 364 (378)
+ +| |+|+|+++
T Consensus 244 ~-~k-r~p~~~~~ 254 (254)
T PRK08252 244 A-EK-RAPVWTGK 254 (254)
T ss_pred h-cC-CCCCCCCC
Confidence 9 88 89999753
No 29
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.2e-53 Score=395.50 Aligned_cols=258 Identities=23% Similarity=0.330 Sum_probs=225.6
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++........ ...
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~~~ 81 (262)
T PRK05995 3 YETLEIEQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSD-DEN 81 (262)
T ss_pred CceEEEEeeCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccCc-hhh
Confidence 5678999999999999999999999999999999999999999999999999999999999999998753211111 111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
......+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+.+ +++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~ 160 (262)
T PRK05995 82 RADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAAR 160 (262)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHH
Confidence 12234456788889999999999999999999999999999999999999999999999999887654 88999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|+++|++++|+||+++||||+|+|++++.+.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~------------------------------------------------ 192 (262)
T PRK05995 161 RYFLTAERFDAAEALRLGLVHEVVPAEALDAK------------------------------------------------ 192 (262)
T ss_pred HHHHcCCccCHHHHHHcCCCCeecCHHHHHHH------------------------------------------------
Confidence 99999999999999999999999998776432
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHH-HHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~-l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+.+++++|++.||.+++.+|++++.....++.+. ++.|...+..++. ++|+++|+++
T Consensus 193 -------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~a 250 (262)
T PRK05995 193 -------------------VDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA---TEEAREGVAA 250 (262)
T ss_pred -------------------HHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 2236899999999999999999998877788888 7888888877776 9999999999
Q ss_pred hhcCCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPFH 364 (378)
Q Consensus 351 fl~ek~r~P~~~~~ 364 (378)
|+ +| |+|+|+++
T Consensus 251 f~-~k-r~p~~~~~ 262 (262)
T PRK05995 251 FL-EK-RKPAWRGR 262 (262)
T ss_pred Hh-cC-CCCCCCCC
Confidence 99 88 89999864
No 30
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-52 Score=395.63 Aligned_cols=259 Identities=21% Similarity=0.287 Sum_probs=229.7
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-CceEEEEecCCCCcccCCChhhHHHhhccC--Ch
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-NIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--KL 109 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~-~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~--~~ 109 (378)
|+.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+ ++++|||||.|++||+|+|++++....... ..
T Consensus 3 ~~~v~~~~~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (266)
T PRK05981 3 FKKVTLDFDGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGG 82 (266)
T ss_pred cceEEEEeECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccc
Confidence 667899999999999999999999999999999999999999876 499999999999999999999875321110 00
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH
Q 017069 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (378)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (378)
.....+...++.++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~ 162 (266)
T PRK05981 83 DAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKA 162 (266)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHH
Confidence 11223344467788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcC
Q 017069 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (378)
Q Consensus 190 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 268 (378)
+++|+++|++++|+||+++||||+++|++++++ +
T Consensus 163 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~--~------------------------------------------- 197 (266)
T PRK05981 163 RAMELSLLGEKLPAETALQWGLVNRVVDDAELMA--E------------------------------------------- 197 (266)
T ss_pred HHHHHHHhCCCcCHHHHHHcCCceEeeCHhHHHH--H-------------------------------------------
Confidence 999999999999999999999999999877643 2
Q ss_pred CCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhH
Q 017069 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGV 348 (378)
Q Consensus 269 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv 348 (378)
+.++++++++.+|.+++.+|++++...+.++.+.++.|...+..++. ++|++||+
T Consensus 198 ----------------------a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~ 252 (266)
T PRK05981 198 ----------------------AMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK---TEDFKEGV 252 (266)
T ss_pred ----------------------HHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---ChhHHHHH
Confidence 22368899999999999999999988888899999999998888887 99999999
Q ss_pred hhhhcCCCCCCCCCC
Q 017069 349 RARMVDRDIAPKVPF 363 (378)
Q Consensus 349 ~afl~ek~r~P~~~~ 363 (378)
.+|+ +| |+|+|++
T Consensus 253 ~af~-~k-r~~~~~~ 265 (266)
T PRK05981 253 GAFL-QK-RPAQFKG 265 (266)
T ss_pred HHHh-cC-CCCCCCC
Confidence 9999 88 8999975
No 31
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-52 Score=393.48 Aligned_cols=256 Identities=23% Similarity=0.326 Sum_probs=230.8
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
.++.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.|++||+|.|++++..... .......
T Consensus 3 ~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~-~~~~~~~ 81 (260)
T PRK07511 3 AELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRA-KPPSVQA 81 (260)
T ss_pred CeeEEEeECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhccc-ccchhHH
Confidence 357889999999999999999999999999999999999999999999999999999999999998754211 1122334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
.+...++.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+
T Consensus 82 ~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (260)
T PRK07511 82 ASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATE 161 (260)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHH
Confidence 4556677888999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
|++||++++|+||+++||||+|||++++.+ +++
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~--~a~--------------------------------------------- 194 (260)
T PRK07511 162 LLLEGKPISAERLHALGVVNRLAEPGQALA--EAL--------------------------------------------- 194 (260)
T ss_pred HHHhCCCCCHHHHHHcCCccEeeCchHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999877643 221
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
++++++++.+|.+++.+|+.++...+.++.++++.|.+.+..++. ++|+++|+++|+
T Consensus 195 --------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~~f~ 251 (260)
T PRK07511 195 --------------------ALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH---HADALEGIAAFL 251 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh
Confidence 357889999999999999999998888999999999999999887 999999999999
Q ss_pred cCCCCCCCCC
Q 017069 353 VDRDIAPKVP 362 (378)
Q Consensus 353 ~ek~r~P~~~ 362 (378)
+| |+|+|+
T Consensus 252 -~~-r~~~~~ 259 (260)
T PRK07511 252 -EK-RAPDYK 259 (260)
T ss_pred -cc-CCCCCC
Confidence 88 899996
No 32
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-52 Score=392.47 Aligned_cols=254 Identities=22% Similarity=0.304 Sum_probs=229.0
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
+.+.++.+++|++||||||++.|++|.+|+.+|.++++.+ .|+++++|||+|.|++||+|+|++++... .......
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~ 81 (260)
T PRK07659 6 ESVVVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSS---NDESKFD 81 (260)
T ss_pred ceEEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhc---cCchhHH
Confidence 5689999999999999999999999999999999999999 58899999999999999999999987532 1122334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
.+...+++++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~ 161 (260)
T PRK07659 82 GVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQ 161 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHH
Confidence 4556677888899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
|+++|+.++|+||+++||||++| ++++++.
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv-~~~~~~~------------------------------------------------- 191 (260)
T PRK07659 162 IIWEGKKLSATEALDLGLIDEVI-GGDFQTA------------------------------------------------- 191 (260)
T ss_pred HHHhCCccCHHHHHHcCChHHHh-hhHHHHH-------------------------------------------------
Confidence 99999999999999999999999 6666431
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
+.+++++|++.||.+++.+|++++.....++.+.++.|.+.+...+. ++|++||+.+|+
T Consensus 192 ------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~ 250 (260)
T PRK07659 192 ------------------AKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ---TADHKEGIRAFL 250 (260)
T ss_pred ------------------HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHh
Confidence 22368899999999999999999988888899999999999988887 999999999999
Q ss_pred cCCCCCCCCCCC
Q 017069 353 VDRDIAPKVPFH 364 (378)
Q Consensus 353 ~ek~r~P~~~~~ 364 (378)
+| |+|+|+++
T Consensus 251 -~k-r~p~~~~~ 260 (260)
T PRK07659 251 -EK-RLPVFKGE 260 (260)
T ss_pred -cC-CCCCCCCC
Confidence 88 89999753
No 33
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-52 Score=391.72 Aligned_cols=253 Identities=25% Similarity=0.318 Sum_probs=220.9
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ....
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~--~~~~ 80 (259)
T PRK06494 3 LPFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGK--RGWP 80 (259)
T ss_pred CceeEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCc--chhh
Confidence 46788999999999999999999999999999999999999999999999999998 79999999998753211 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
. ..+..+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 81 -~---~~~~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 155 (259)
T PRK06494 81 -E---SGFGGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRA 155 (259)
T ss_pred -h---HHHHHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHH
Confidence 1 112223 334589999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
.+++++|+.++|+||+++||||+++|++++.+.
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~~----------------------------------------------- 188 (259)
T PRK06494 156 MGMILTGRRVTAREGLELGFVNEVVPAGELLAA----------------------------------------------- 188 (259)
T ss_pred HHHHHcCCcCCHHHHHHcCCCcEecCHhHHHHH-----------------------------------------------
Confidence 999999999999999999999999998776432
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHH--HHHHHHccccCCCCcHHhhH
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE--YRMSLQGVSRLISGDFYEGV 348 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e--~~~~~~~~~~~~~~d~~egv 348 (378)
+.+++++|++.||.+++.+|++++.....+++++++.| ...+..++. ++|++||+
T Consensus 189 --------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~d~~eg~ 245 (259)
T PRK06494 189 --------------------AERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRA---SQDYIEGP 245 (259)
T ss_pred --------------------HHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc---CccHHHHH
Confidence 22368899999999999999999988888899999998 455666676 99999999
Q ss_pred hhhhcCCCCCCCCCCC
Q 017069 349 RARMVDRDIAPKVPFH 364 (378)
Q Consensus 349 ~afl~ek~r~P~~~~~ 364 (378)
++|+ +| |+|+|+++
T Consensus 246 ~af~-~k-r~p~~~~~ 259 (259)
T PRK06494 246 KAFA-EK-RPPRWKGR 259 (259)
T ss_pred HHHH-cc-CCCCCCCC
Confidence 9999 88 89999753
No 34
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4e-52 Score=390.65 Aligned_cols=257 Identities=20% Similarity=0.267 Sum_probs=223.6
Q ss_pred CCceEEEee-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~-~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
++.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... ....
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~ 81 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRAT 81 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhh
Confidence 456888885 68999999999999999999999999999999999999999999999999999999987532111 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
.......+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++ ++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~-~vG~~~a 160 (262)
T PRK07468 82 RIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVA-RMGEANA 160 (262)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHh-hccHHHH
Confidence 122234456788899999999999999999999999999999999999999999999999999999988664 58998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++|+++|++++|+||+++||||+|+|++++++..
T Consensus 161 ~~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~~---------------------------------------------- 194 (262)
T PRK07468 161 RRVFMSARLFDAEEAVRLGLLSRVVPAERLDAAV---------------------------------------------- 194 (262)
T ss_pred HHHHHhCCccCHHHHHHcCCcceecCHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999987664322
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
.++++++++.+|.+++.+|++++......+++.++.|...+..++. ++|++||+++
T Consensus 195 ---------------------~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~a 250 (262)
T PRK07468 195 ---------------------EAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE---TEEAREGIAA 250 (262)
T ss_pred ---------------------HHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 2358899999999999999999987666788999999998888887 9999999999
Q ss_pred hhcCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPF 363 (378)
Q Consensus 351 fl~ek~r~P~~~~ 363 (378)
|+ +| |+|+|.+
T Consensus 251 f~-~k-r~~~~~~ 261 (262)
T PRK07468 251 FF-DK-RAPAWRG 261 (262)
T ss_pred HH-cC-CCCCCCC
Confidence 99 88 8999964
No 35
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.8e-52 Score=391.23 Aligned_cols=256 Identities=22% Similarity=0.326 Sum_probs=220.0
Q ss_pred cCCCceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCCh
Q 017069 31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 109 (378)
Q Consensus 31 ~~~~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~ 109 (378)
..++.|.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++.... ...
T Consensus 8 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~ 85 (268)
T PRK07327 8 ADYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMA--DDF 85 (268)
T ss_pred CCCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhcc--CcH
Confidence 3467789988 5899999999999999999999999999999999999999999999999999999999875421 122
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH
Q 017069 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (378)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (378)
.....++.....++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 165 (268)
T PRK07327 86 EVRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMA 165 (268)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHH
Confidence 22334445566788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcC
Q 017069 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (378)
Q Consensus 190 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 268 (378)
+.++++||++++|+||+++||||+++|++++++ +
T Consensus 166 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~------------------------------------------- 200 (268)
T PRK07327 166 KAKYYLLLCEPVSGEEAERIGLVSLAVDDDELLP--K------------------------------------------- 200 (268)
T ss_pred HHHHHHHcCCccCHHHHHHcCCcceecCHHHHHH--H-------------------------------------------
Confidence 999999999999999999999999999877643 2
Q ss_pred CCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHccccCCCCcHH
Q 017069 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF---QTFDECLVREYRMSLQGVSRLISGDFY 345 (378)
Q Consensus 269 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~---~~~~~~l~~e~~~~~~~~~~~~~~d~~ 345 (378)
+.+++++|++.+|.+++.+|++++.... ..++..+..|. ..+. ++|++
T Consensus 201 ----------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~~---~~d~~ 251 (268)
T PRK07327 201 ----------------------ALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGFS---GPDVR 251 (268)
T ss_pred ----------------------HHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHcc---ChhHH
Confidence 2236899999999999999999986532 23455444442 3444 99999
Q ss_pred hhHhhhhcCCCCCCCCCCC
Q 017069 346 EGVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 346 egv~afl~ek~r~P~~~~~ 364 (378)
||+.+|+ +| |+|+|++.
T Consensus 252 eg~~af~-ek-r~p~~~~~ 268 (268)
T PRK07327 252 EGLASLR-EK-RAPDFPGD 268 (268)
T ss_pred HHHHHHH-hc-CCCCCCCC
Confidence 9999999 88 89999863
No 36
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=5.3e-52 Score=392.06 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=220.7
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
.|+.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++...........
T Consensus 6 ~~~~i~~~~~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 85 (275)
T PRK09120 6 RWDTVKVEVEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEIL 85 (275)
T ss_pred ccccEEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHH
Confidence 47779999999999999999999999999999999999999999999999999999999999999998753211111111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
.......++.++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a 165 (275)
T PRK09120 86 QERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDA 165 (275)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHH
Confidence 222333456678889999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++|+++|+.++|+||+++|||++|||++++++..
T Consensus 166 ~~llltg~~~~A~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 199 (275)
T PRK09120 166 LYYIMTGETFTGRKAAEMGLVNESVPLAQLRART---------------------------------------------- 199 (275)
T ss_pred HHHHhcCCccCHHHHHHcCCcceecCHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999988775322
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHH--HHHccccCCCC-cHHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRM--SLQGVSRLISG-DFYEG 347 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~--~~~~~~~~~~~-d~~eg 347 (378)
.+++++|+..+|.+++.+|++++.....++.+.++.|... ...++. ++ |++||
T Consensus 200 ---------------------~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~eg 255 (275)
T PRK09120 200 ---------------------RELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREEG 255 (275)
T ss_pred ---------------------HHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHHH
Confidence 2368999999999999999999998888899998887644 333454 77 89999
Q ss_pred HhhhhcCC
Q 017069 348 VRARMVDR 355 (378)
Q Consensus 348 v~afl~ek 355 (378)
+++|+ +|
T Consensus 256 ~~afl-~k 262 (275)
T PRK09120 256 LKQFL-DD 262 (275)
T ss_pred HHHHH-hc
Confidence 99999 66
No 37
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.3e-52 Score=391.58 Aligned_cols=258 Identities=21% Similarity=0.262 Sum_probs=221.2
Q ss_pred CCceEEEee-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~-~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
|+.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... .....
T Consensus 4 ~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~-~~~~~ 82 (265)
T PRK05674 4 FQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSAD-LDYNT 82 (265)
T ss_pred cceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhccc-ccchh
Confidence 677899985 7899999999999999999999999999999999999999999999999999999998753211 01111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
.......+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+. ++++++|.. +
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~~a 161 (265)
T PRK05674 83 NLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGERAA 161 (265)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHHHH
Confidence 11122345677888999999999999999999999999999999999999999999999999987765 488999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
+++++||+.++|+||+++||||+|+|++++.+ +
T Consensus 162 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~--------------------------------------------- 194 (265)
T PRK05674 162 RRYALTAERFDGRRARELGLLAESYPAAELEA--Q--------------------------------------------- 194 (265)
T ss_pred HHHHHhCcccCHHHHHHCCCcceecCHHHHHH--H---------------------------------------------
Confidence 99999999999999999999999999876643 1
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHH-HHHHHHccccCCCCcHHhhHh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE-YRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e-~~~~~~~~~~~~~~d~~egv~ 349 (378)
+.+++++|++.||.+++.+|++++.....++.++++.+ ...+...+. ++|++||++
T Consensus 195 --------------------a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~e~~~ 251 (265)
T PRK05674 195 --------------------VEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRV---SAEGQEGLR 251 (265)
T ss_pred --------------------HHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 12368899999999999999999998888888887653 345555665 999999999
Q ss_pred hhhcCCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPFH 364 (378)
Q Consensus 350 afl~ek~r~P~~~~~ 364 (378)
+|+ +| |+|+|...
T Consensus 252 af~-~k-r~p~~~~~ 264 (265)
T PRK05674 252 AFL-EK-RTPAWQTD 264 (265)
T ss_pred HHH-cc-CCCCCCCC
Confidence 999 88 89999754
No 38
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-52 Score=390.09 Aligned_cols=254 Identities=27% Similarity=0.377 Sum_probs=230.5
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
...+.++++++|++|+||||++.|++|.+++.+|.++++.++.|+++++|||+|.|++||+|+|++++.... .. .
T Consensus 4 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~-~-- 78 (259)
T PRK06688 4 VTDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--PK-P-- 78 (259)
T ss_pred CCceEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--cc-h--
Confidence 346889999999999999999999999999999999999999999999999999999999999999876421 11 1
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+...+++++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. +.
T Consensus 79 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~ 158 (259)
T PRK06688 79 PDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAA 158 (259)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHH
Confidence 23455667888899999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|++++|+||+++||||+++|++++.+.
T Consensus 159 ~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~------------------------------------------------ 190 (259)
T PRK06688 159 EMLLLGEPLSAEEALRIGLVNRVVPAAELDAE------------------------------------------------ 190 (259)
T ss_pred HHHHhCCccCHHHHHHcCCcceecCHHHHHHH------------------------------------------------
Confidence 99999999999999999999999998766431
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+.+++++|++.+|.+++.+|+++++....+++++++.|.+.+..++. ++|+++++++|
T Consensus 191 -------------------a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~af 248 (259)
T PRK06688 191 -------------------ADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLR---TPDFREGATAF 248 (259)
T ss_pred -------------------HHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 22358889999999999999999998888999999999999998887 99999999999
Q ss_pred hcCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPF 363 (378)
Q Consensus 352 l~ek~r~P~~~~ 363 (378)
+ +| |+|+|++
T Consensus 249 ~-~~-~~p~~~~ 258 (259)
T PRK06688 249 I-EK-RKPDFTG 258 (259)
T ss_pred H-cC-CCCCCCC
Confidence 9 88 8999975
No 39
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.3e-52 Score=389.22 Aligned_cols=255 Identities=25% Similarity=0.339 Sum_probs=222.1
Q ss_pred ccCCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCC
Q 017069 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK 108 (378)
Q Consensus 30 ~~~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~ 108 (378)
.++.+.+.++.+++|++||||||++.|++|.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++.... .
T Consensus 4 ~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~---~ 80 (262)
T PRK06144 4 TTSTDELLLEVRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFS---T 80 (262)
T ss_pred ccCCCceEEEeeCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhcc---c
Confidence 34566799999999999999999999999999999999999999999999999999998 7999999999875421 1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccc-cCccCCcchHHHHhhcch
Q 017069 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLPG 187 (378)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~-~Gl~p~~g~~~~l~r~~g 187 (378)
.+....+...+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG 160 (262)
T PRK06144 81 AEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLG 160 (262)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhC
Confidence 1222234445677888899999999999999999999999999999999999999999996 999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHh
Q 017069 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (378)
Q Consensus 188 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (378)
.. +++++++|++++|+||+++||||+|+|++++++.
T Consensus 161 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~------------------------------------------- 197 (262)
T PRK06144 161 AARVKDMLFTARLLEAEEALAAGLVNEVVEDAALDAR------------------------------------------- 197 (262)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCCcCeecCHHHHHHH-------------------------------------------
Confidence 99 9999999999999999999999999998776431
Q ss_pred cCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHh
Q 017069 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (378)
Q Consensus 267 f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 346 (378)
+.+++++|++.||.+++.+|+.++......+ +.+.+.+..++. ++|++|
T Consensus 198 ------------------------a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~~---~~~~~e 246 (262)
T PRK06144 198 ------------------------ADALAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCYM---SEDFRE 246 (262)
T ss_pred ------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHhc---ChHHHH
Confidence 2236899999999999999999987655444 334556666666 999999
Q ss_pred hHhhhhcCCCCCCCCCC
Q 017069 347 GVRARMVDRDIAPKVPF 363 (378)
Q Consensus 347 gv~afl~ek~r~P~~~~ 363 (378)
|+.+|+ +| |+|.|.+
T Consensus 247 ~~~af~-~k-r~p~~~~ 261 (262)
T PRK06144 247 GVEAFL-EK-RPPKWKG 261 (262)
T ss_pred HHHHHh-cC-CCCCCCC
Confidence 999999 88 8999975
No 40
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.7e-52 Score=388.08 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=225.7
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
+|+.|.++.+++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..... ....
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~--~~~~ 78 (257)
T PRK06495 2 MMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIK--GPGD 78 (257)
T ss_pred CcceEEEEeeCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhccC--Cchh
Confidence 4667899999999999999998 699999999999999999999999999999999999999999998753211 1122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
...+...+++++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+. |+++++++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a 155 (257)
T PRK06495 79 LRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLT 155 (257)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHH
Confidence 23344556678888999999999999999999999999999999999999999999999996 4567899999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
.+|+++|+.++|+||+++||||+++|++++.+.
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~~~~~----------------------------------------------- 188 (257)
T PRK06495 156 RRMMLTGYRVPAAELYRRGVIEACLPPEELMPE----------------------------------------------- 188 (257)
T ss_pred HHHHHcCCeeCHHHHHHcCCcceecCHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999998776432
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+.+++++|++.||.+++.+|++++.....++.++++.|...+...+. ++|++||+++
T Consensus 189 --------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~a 245 (257)
T PRK06495 189 --------------------AMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK---TEDAKEAQRA 245 (257)
T ss_pred --------------------HHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChHHHHHHHH
Confidence 22368999999999999999999998888999999999998888887 9999999999
Q ss_pred hhcCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPF 363 (378)
Q Consensus 351 fl~ek~r~P~~~~ 363 (378)
|+ +| |+|+|++
T Consensus 246 f~-~k-r~p~~~~ 256 (257)
T PRK06495 246 FL-EK-RPPVFKG 256 (257)
T ss_pred Hh-cc-CCCCCCC
Confidence 99 88 8999975
No 41
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.9e-52 Score=392.32 Aligned_cols=259 Identities=27% Similarity=0.365 Sum_probs=226.2
Q ss_pred CCceEEEeeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChH-
Q 017069 33 CNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE- 110 (378)
Q Consensus 33 ~~~v~~~~~~-~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~- 110 (378)
++.+.++.++ +|++||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..........
T Consensus 4 ~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 83 (272)
T PRK06210 4 YDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRD 83 (272)
T ss_pred cceEEEEECCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccccccc
Confidence 4678999998 99999999999999999999999999999999999999999999999999999999875421100000
Q ss_pred -HHHHH----HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhc
Q 017069 111 -ECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (378)
Q Consensus 111 -~~~~~----~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ 185 (378)
....+ ...+++++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 163 (272)
T PRK06210 84 TDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRL 163 (272)
T ss_pred ccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhh
Confidence 00011 1123456778899999999999999999999999999999999999999999999999999999999999
Q ss_pred chHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHH
Q 017069 186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (378)
Q Consensus 186 ~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (378)
+|.. +++|++||+.++|+||+++||||+++|++++.+ +
T Consensus 164 ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~--------------------------------------- 202 (272)
T PRK06210 164 VGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELME--R--------------------------------------- 202 (272)
T ss_pred hCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHH--H---------------------------------------
Confidence 9999 999999999999999999999999999876642 2
Q ss_pred HhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhc-CchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCc
Q 017069 265 KCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (378)
Q Consensus 265 ~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~-~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 343 (378)
+.+++++|++. +|.++..+|+++++....++.++++.|...+..++. ++|
T Consensus 203 --------------------------a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~ 253 (272)
T PRK06210 203 --------------------------TLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ---RPD 253 (272)
T ss_pred --------------------------HHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc---Ccc
Confidence 12357889985 999999999999998888999999999998888886 999
Q ss_pred HHhhHhhhhcCCCCCCCCCC
Q 017069 344 FYEGVRARMVDRDIAPKVPF 363 (378)
Q Consensus 344 ~~egv~afl~ek~r~P~~~~ 363 (378)
++||+++|+ +| |+|.|.+
T Consensus 254 ~~egi~af~-~k-r~p~~~~ 271 (272)
T PRK06210 254 FIEGVASFL-EK-RPPRFPG 271 (272)
T ss_pred HHHHHHHHh-cc-CCCCCCC
Confidence 999999999 88 8999975
No 42
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=6.6e-52 Score=387.82 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=215.4
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
|+.|.++.+++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... ....
T Consensus 1 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~--~~~~-- 76 (256)
T TIGR03210 1 YEDILYEKRNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG--YDGR-- 76 (256)
T ss_pred CCceEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc--ccch--
Confidence 45688999999999999999999999999999999999999999999999999999 799999999987421 0111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|.. |
T Consensus 77 -~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A 155 (256)
T TIGR03210 77 -GTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKA 155 (256)
T ss_pred -hHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHH
Confidence 11223356678889999999999999999999999999999999999999999999999998888899999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++++++|++++|+||+++||||+|+|++++++..
T Consensus 156 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 189 (256)
T TIGR03210 156 REIWYLCRRYTAQEALAMGLVNAVVPHDQLDAEV---------------------------------------------- 189 (256)
T ss_pred HHHHHhCCCcCHHHHHHcCCceeeeCHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999987764322
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCH-HHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF-DECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~-~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
.+++++|++.||.+++.+|++++....... .+. .|...+..++. ++|++||+.
T Consensus 190 ---------------------~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~--~~~~~~~~~~~---~~d~~e~~~ 243 (256)
T TIGR03210 190 ---------------------QKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAG--MGMYALKLYYD---TAESREGVK 243 (256)
T ss_pred ---------------------HHHHHHHHhCCHHHHHHHHHHHHHhhcccchHHH--HHHHHHHHHcc---ChhHHHHHH
Confidence 236899999999999999999987654321 111 23345555665 999999999
Q ss_pred hhhcCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPF 363 (378)
Q Consensus 350 afl~ek~r~P~~~~ 363 (378)
+|+ +| |+|+|++
T Consensus 244 af~-~k-r~p~~~~ 255 (256)
T TIGR03210 244 AFQ-EK-RKPEFRK 255 (256)
T ss_pred HHh-cc-CCCCCCC
Confidence 999 88 8999975
No 43
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=6.7e-52 Score=388.41 Aligned_cols=254 Identities=18% Similarity=0.223 Sum_probs=217.7
Q ss_pred CceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 34 NQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 34 ~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
+.+.+++ +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... .....
T Consensus 2 ~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~~~~ 80 (259)
T TIGR01929 2 TDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGY-IDDSG 80 (259)
T ss_pred ceEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccc-cchhh
Confidence 4578888 899999999999999999999999999999999999999999999999 79999999997642100 01111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
. .. ..+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 81 ~-~~-~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a 158 (259)
T TIGR01929 81 V-HR-LNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKA 158 (259)
T ss_pred H-HH-HHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHH
Confidence 1 11 1234677788999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++|+++|++++|+||+++||||+|||++++.+.
T Consensus 159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~----------------------------------------------- 191 (259)
T TIGR01929 159 REIWFLCRQYDAEQALDMGLVNTVVPLADLEKE----------------------------------------------- 191 (259)
T ss_pred HHHHHhCCccCHHHHHHcCCcccccCHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999998766432
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+.+++++|++.||.+++.+|++++..... ....+..|.+.+...+. ++|++|||++
T Consensus 192 --------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~---~~d~~egi~a 247 (259)
T TIGR01929 192 --------------------TVRWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYM---TEEGQEGRNA 247 (259)
T ss_pred --------------------HHHHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhc---CccHHHHHHH
Confidence 22368999999999999999999976543 34455566677777776 9999999999
Q ss_pred hhcCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPF 363 (378)
Q Consensus 351 fl~ek~r~P~~~~ 363 (378)
|+ +| |+|+|++
T Consensus 248 f~-~k-r~p~~~~ 258 (259)
T TIGR01929 248 FL-EK-RQPDFSK 258 (259)
T ss_pred Hh-cc-CCCCCCC
Confidence 99 88 8999975
No 44
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=9e-52 Score=388.06 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=221.3
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
+.+.++++++|++||||||+ .|++|.+|+.+|.++++.++.|++|++|||||.| ++||+|+|++++.... .. .
T Consensus 3 ~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~--~~-~-- 76 (261)
T PRK03580 3 ESLHTTRNGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE--AP-D-- 76 (261)
T ss_pred ceEEEEEECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccC--cc-h--
Confidence 45889999999999999995 6999999999999999999999999999999999 7999999999875321 11 1
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+......++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~ 156 (261)
T PRK03580 77 ADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIAN 156 (261)
T ss_pred hhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 11112223456788899999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|+.++|+||+++||||+|+|++++.+..
T Consensus 157 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 189 (261)
T PRK03580 157 EMVMTGRRMDAEEALRWGIVNRVVPQAELMDRA----------------------------------------------- 189 (261)
T ss_pred HHHHhCCccCHHHHHHcCCCcEecCHhHHHHHH-----------------------------------------------
Confidence 999999999999999999999999988764322
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHH----HHHHccccCCCCcHHhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR----MSLQGVSRLISGDFYEG 347 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~----~~~~~~~~~~~~d~~eg 347 (378)
.+++++|++.+|.+++.+|++++.....+++++++.|.. .+..++. ++|++||
T Consensus 190 --------------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~d~~e~ 246 (261)
T PRK03580 190 --------------------RELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLH---SEDALEG 246 (261)
T ss_pred --------------------HHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhc---CccHHHH
Confidence 235889999999999999999998888889999998864 5566665 9999999
Q ss_pred HhhhhcCCCCCCCCCC
Q 017069 348 VRARMVDRDIAPKVPF 363 (378)
Q Consensus 348 v~afl~ek~r~P~~~~ 363 (378)
+++|+ +| |+|+|++
T Consensus 247 ~~af~-ek-r~~~~~~ 260 (261)
T PRK03580 247 PRAFA-EK-RDPVWKG 260 (261)
T ss_pred HHHHh-cC-CCCCCCC
Confidence 99999 88 8999975
No 45
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-51 Score=387.49 Aligned_cols=257 Identities=25% Similarity=0.255 Sum_probs=225.7
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
|++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... ......
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~ 79 (262)
T PRK07509 1 MMDRVSVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKL 79 (262)
T ss_pred CCceEEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhh
Confidence 4678999999999999999999999999999999999999999999999999999999999999999875421 111111
Q ss_pred HHH----HHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcch
Q 017069 112 CKD----FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (378)
Q Consensus 112 ~~~----~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (378)
... ....+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g 159 (262)
T PRK07509 80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVR 159 (262)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhC
Confidence 111 1223455677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHh
Q 017069 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (378)
Q Consensus 188 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (378)
.. +.++++||++++|+||+++||||+++++ +.+ +
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~--~~~--~----------------------------------------- 194 (262)
T PRK07509 160 KDVARELTYTARVFSAEEALELGLVTHVSDD--PLA--A----------------------------------------- 194 (262)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCChhhhhch--HHH--H-----------------------------------------
Confidence 99 9999999999999999999999999953 221 1
Q ss_pred cCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHh
Q 017069 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (378)
Q Consensus 267 f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 346 (378)
+.+++++|++.+|.++..+|++++.....+++++++.|.+.+..++. ++|++|
T Consensus 195 ------------------------a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 247 (262)
T PRK07509 195 ------------------------ALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL---GKNQKI 247 (262)
T ss_pred ------------------------HHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHH
Confidence 12368899999999999999999998888899999999998888887 999999
Q ss_pred hHhhhhcCCCCCCCCCC
Q 017069 347 GVRARMVDRDIAPKVPF 363 (378)
Q Consensus 347 gv~afl~ek~r~P~~~~ 363 (378)
|+.+|+ +| |+|.|.+
T Consensus 248 ~~~af~-ek-r~p~~~~ 262 (262)
T PRK07509 248 AVKAQM-KK-RAPKFLD 262 (262)
T ss_pred HHHHHh-cC-CCCCCCC
Confidence 999999 88 8999964
No 46
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-51 Score=390.35 Aligned_cols=261 Identities=21% Similarity=0.281 Sum_probs=222.4
Q ss_pred CCCceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccC---
Q 017069 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--- 107 (378)
Q Consensus 32 ~~~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~--- 107 (378)
.++.|.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......
T Consensus 7 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~ 86 (276)
T PRK05864 7 TMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLT 86 (276)
T ss_pred CCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccccccc
Confidence 456688887 7899999999999999999999999999999999999999999999999999999999874211000
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccC-CcchHHHHhhcc
Q 017069 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLP 186 (378)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p-~~g~~~~l~r~~ 186 (378)
...........++.++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~v 166 (276)
T PRK05864 87 RPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAI 166 (276)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhh
Confidence 1111122334456778889999999999999999999999999999999999999999999999997 788999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHH
Q 017069 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 265 (378)
Q Consensus 187 g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
|.. +.+|+++|++++|+||+++||||+|+|++++++..
T Consensus 167 G~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------- 205 (276)
T PRK05864 167 GSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTC----------------------------------------- 205 (276)
T ss_pred CHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHHHHH-----------------------------------------
Confidence 999 99999999999999999999999999987764322
Q ss_pred hcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcC-CHHHHHHHHHHHHH-HccccCCCCc
Q 017069 266 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSL-QGVSRLISGD 343 (378)
Q Consensus 266 ~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~-~~~~~l~~e~~~~~-~~~~~~~~~d 343 (378)
.+++++|+..||.+++.+|++++..... ++++.++.|..... ..+. ++|
T Consensus 206 --------------------------~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~---~~d 256 (276)
T PRK05864 206 --------------------------YAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLL---TAN 256 (276)
T ss_pred --------------------------HHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcc---Chh
Confidence 2368999999999999999999987664 78888887765322 2344 999
Q ss_pred HHhhHhhhhcCCCCCCCCCCC
Q 017069 344 FYEGVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 344 ~~egv~afl~ek~r~P~~~~~ 364 (378)
++||+++|+ +| |+|+|.+.
T Consensus 257 ~~e~~~af~-~k-r~p~~~~~ 275 (276)
T PRK05864 257 FEEAVAARA-EK-RPPVFTDD 275 (276)
T ss_pred HHHHHHHHh-cc-CCCCCCCC
Confidence 999999999 88 89999764
No 47
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-51 Score=386.40 Aligned_cols=252 Identities=24% Similarity=0.381 Sum_probs=225.3
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++++.++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++............
T Consensus 1 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK07260 1 FEHIIYEVEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSL 80 (255)
T ss_pred CCceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhH
Confidence 35688899999999999999999999999999999999999999999999999999999999999987643222222222
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+...+++++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 160 (255)
T PRK07260 81 VKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRAT 160 (255)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHH
Confidence 23444567788899999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|+++|++++|+||+++||||+++|++++++..
T Consensus 161 ~l~l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 193 (255)
T PRK07260 161 HLAMTGEALTAEKALEYGFVYRVAESEKLEKTC----------------------------------------------- 193 (255)
T ss_pred HHHHhCCccCHHHHHHcCCcceecCHhHHHHHH-----------------------------------------------
Confidence 999999999999999999999999987764322
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
.++++++++.+|.+++.+|+.++.....++++.++.|...+..++. ++|++||+++|
T Consensus 194 --------------------~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 250 (255)
T PRK07260 194 --------------------EQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF---KEDFKEGVRAF 250 (255)
T ss_pred --------------------HHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 2358999999999999999999998888899999999998888887 99999999999
Q ss_pred hcCC
Q 017069 352 MVDR 355 (378)
Q Consensus 352 l~ek 355 (378)
+ +|
T Consensus 251 ~-~k 253 (255)
T PRK07260 251 S-ER 253 (255)
T ss_pred H-hc
Confidence 9 77
No 48
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-51 Score=384.64 Aligned_cols=246 Identities=21% Similarity=0.309 Sum_probs=220.7
Q ss_pred CceEEE-eeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 34 NQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 34 ~~v~~~-~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
+.+.++ .+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... ....
T Consensus 6 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~ 81 (256)
T PRK06143 6 AHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQAS 81 (256)
T ss_pred ccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----Chhh
Confidence 456677 4688999999999999999999999999999999999999999999999 799999999987532 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
...+...++.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |++|++++|++++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a 160 (256)
T PRK06143 82 AEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWART 160 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHH
Confidence 3345556677888999999999999999999999999999999999999999999999998 7888899999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++++++|+.++|+||+++||||+|||++++++..
T Consensus 161 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a---------------------------------------------- 194 (256)
T PRK06143 161 RWLLLTGETIDAAQALAWGLVDRVVPLAELDAAV---------------------------------------------- 194 (256)
T ss_pred HHHHHcCCcCCHHHHHHCCCcCeecCHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999987764322
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
.+++++++..||.+++.+|++++......+++.++.|...+...+. ++|++||+++
T Consensus 195 ---------------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~e~~~a 250 (256)
T PRK06143 195 ---------------------ERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL---TGEPQRHMAA 250 (256)
T ss_pred ---------------------HHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHH
Confidence 2368999999999999999999998888899999999999988887 9999999999
Q ss_pred hhcCC
Q 017069 351 RMVDR 355 (378)
Q Consensus 351 fl~ek 355 (378)
|+ +|
T Consensus 251 f~-ek 254 (256)
T PRK06143 251 FL-NR 254 (256)
T ss_pred HH-hh
Confidence 99 77
No 49
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-51 Score=391.49 Aligned_cols=259 Identities=22% Similarity=0.279 Sum_probs=221.1
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccC-----
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG----- 107 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~----- 107 (378)
++.|.++++++|++||||||++.|+||.+|+.+|.++|+.++.|+++++|||||.|++||+|+|++++.......
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (296)
T PRK08260 3 YETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTP 82 (296)
T ss_pred cceEEEeeeCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccc
Confidence 456889999999999999999999999999999999999999999999999999999999999999875311000
Q ss_pred --------ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchH
Q 017069 108 --------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS 179 (378)
Q Consensus 108 --------~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~ 179 (378)
.......+...+..++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~ 162 (296)
T PRK08260 83 VEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASS 162 (296)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchh
Confidence 011112233334567888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhh
Q 017069 180 FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH 258 (378)
Q Consensus 180 ~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (378)
++|++++|.. +++|+++|++++|+||+++||||+|||++++.+ .+
T Consensus 163 ~~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a-------------------------------- 208 (296)
T PRK08260 163 WFLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLP--AA-------------------------------- 208 (296)
T ss_pred hhHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHHHHHH--HH--------------------------------
Confidence 9999999999 999999999999999999999999999876642 22
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhc-CchHHHHHHHHHHHhhc--CCHHHHHHHHHHHHHHc
Q 017069 259 RIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRF--QTFDECLVREYRMSLQG 335 (378)
Q Consensus 259 ~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~-~p~a~~~~k~~l~~~~~--~~~~~~l~~e~~~~~~~ 335 (378)
.+++++|+++ +|.+++.+|++++.... .... ....|...+..+
T Consensus 209 ---------------------------------~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~e~~~~~~~ 254 (296)
T PRK08260 209 ---------------------------------RALAREIADNTSPVSVALTRQMMWRMAGADHPME-AHRVDSRAIYSR 254 (296)
T ss_pred ---------------------------------HHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHH-HHHHHHHHHHHH
Confidence 2358889985 99999999999997642 2333 335577777777
Q ss_pred cccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 017069 336 VSRLISGDFYEGVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 336 ~~~~~~~d~~egv~afl~ek~r~P~~~~~ 364 (378)
+. ++|++||+.+|+ +| |+|.|+++
T Consensus 255 ~~---~~d~~egi~af~-~k-r~p~f~~~ 278 (296)
T PRK08260 255 GR---SGDGKEGVSSFL-EK-RPAVFPGK 278 (296)
T ss_pred cc---ChhHHHHHHHHh-cC-CCCCCCCC
Confidence 66 999999999999 88 89999987
No 50
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=3.5e-51 Score=386.23 Aligned_cols=256 Identities=18% Similarity=0.235 Sum_probs=219.9
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... .....
T Consensus 12 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~~~~ 90 (273)
T PRK07396 12 YEDILYKSADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGY-VDDDG 90 (273)
T ss_pred CcceEEEecCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccc-cchhh
Confidence 56789999999999999999999999999999999999999999999999999999 69999999998642100 01111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
... . ....++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 91 ~~~-~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a 168 (273)
T PRK07396 91 VPR-L-NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKA 168 (273)
T ss_pred hhh-h-HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHH
Confidence 111 1 134567788999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
.+|+++|+.++|+||+++||||+|||++++++..
T Consensus 169 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a---------------------------------------------- 202 (273)
T PRK07396 169 REIWFLCRQYDAQEALDMGLVNTVVPLADLEKET---------------------------------------------- 202 (273)
T ss_pred HHHHHhCCCcCHHHHHHcCCcCeecCHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999987764322
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
.+++++|++.+|.+++.+|++++.... ......+.|.+.+...+. ++|++|||.+
T Consensus 203 ---------------------~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~a 257 (273)
T PRK07396 203 ---------------------VRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEAQEGRNA 257 (273)
T ss_pred ---------------------HHHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhc---ChhHHHHHHH
Confidence 236899999999999999999987654 355455567777777666 9999999999
Q ss_pred hhcCCCCCCCCCCC
Q 017069 351 RMVDRDIAPKVPFH 364 (378)
Q Consensus 351 fl~ek~r~P~~~~~ 364 (378)
|+ +| |+|+|++.
T Consensus 258 f~-~k-r~p~~~~~ 269 (273)
T PRK07396 258 FN-EK-RQPDFSKF 269 (273)
T ss_pred Hh-CC-CCCCCCCC
Confidence 99 88 89999874
No 51
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=2.8e-51 Score=384.47 Aligned_cols=254 Identities=19% Similarity=0.228 Sum_probs=222.9
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecC-C-CCcccCCChhhHHHhhccCChH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-G-RAFCAGGDIVSLYHFMNQGKLE 110 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~-g-~~F~~G~Dl~~~~~~~~~~~~~ 110 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+ +++|||||. | ++||+|+|++++.... ..
T Consensus 3 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~--~~-- 77 (261)
T PRK11423 3 MQYVNVVTINKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG--RD-- 77 (261)
T ss_pred ccceEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc--cc--
Confidence 567899999999999999999999999999999999999999887 999999996 3 8999999999875321 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-
Q 017069 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (378)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (378)
...+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..
T Consensus 78 -~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~ 156 (261)
T PRK11423 78 -PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHI 156 (261)
T ss_pred -HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHH
Confidence 123344566788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+.+++++|++++|+||+++||||+|||++++++.
T Consensus 157 a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~~---------------------------------------------- 190 (261)
T PRK11423 157 VKEMFFTASPITAQRALAVGILNHVVEVEELEDF---------------------------------------------- 190 (261)
T ss_pred HHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999998776432
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhc-CCH-HHHHHHHHHHHHHccccCCCCcHHhh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTF-DECLVREYRMSLQGVSRLISGDFYEG 347 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~-~~~-~~~l~~e~~~~~~~~~~~~~~d~~eg 347 (378)
+.+++++|++.+|.+++.+|++++.... ... ...++.|.+.+..++. ++|++||
T Consensus 191 ---------------------a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~eg 246 (261)
T PRK11423 191 ---------------------TLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD---SEDYQEG 246 (261)
T ss_pred ---------------------HHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC---ChhHHHH
Confidence 2246899999999999999999986543 233 5778888888888886 9999999
Q ss_pred HhhhhcCCCCCCCCCCC
Q 017069 348 VRARMVDRDIAPKVPFH 364 (378)
Q Consensus 348 v~afl~ek~r~P~~~~~ 364 (378)
+.+|+ +| |+|+|+++
T Consensus 247 ~~af~-~k-r~p~~~~~ 261 (261)
T PRK11423 247 MNAFL-EK-RKPVFVGH 261 (261)
T ss_pred HHHHh-cc-CCCCCCCC
Confidence 99999 88 89999753
No 52
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.7e-51 Score=379.30 Aligned_cols=247 Identities=25% Similarity=0.344 Sum_probs=220.4
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++... . ...+
T Consensus 2 i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~----~---~~~~ 74 (248)
T PRK06072 2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD----F---AIDL 74 (248)
T ss_pred eEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh----h---HHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999987531 1 1223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHh
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 195 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~l 195 (378)
...++.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..+.++++
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll 154 (248)
T PRK06072 75 RETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILV 154 (248)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHH
Confidence 34456778889999999999999999999999999999999999999999999999999999999999999966999999
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHHH
Q 017069 196 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275 (378)
Q Consensus 196 tG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i 275 (378)
+|++++|+||+++||||++ +++. .+
T Consensus 155 ~g~~~~a~eA~~~Glv~~~---~~~~--~~-------------------------------------------------- 179 (248)
T PRK06072 155 LGGEFTAEEAERWGLLKIS---EDPL--SD-------------------------------------------------- 179 (248)
T ss_pred hCCccCHHHHHHCCCcccc---chHH--HH--------------------------------------------------
Confidence 9999999999999999963 2332 12
Q ss_pred HHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcCC
Q 017069 276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVDR 355 (378)
Q Consensus 276 ~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ek 355 (378)
+.+++++|++.||.+++.+|++++......+++.++.|.+.+..++. ++|++||+++|+ +|
T Consensus 180 ---------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k 240 (248)
T PRK06072 180 ---------------AEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGK---TEDFKEGISSFK-EK 240 (248)
T ss_pred ---------------HHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhC---ChhHHHHHHHHh-cC
Confidence 22368999999999999999999988888899999999999888887 999999999999 88
Q ss_pred CCCCCCCCC
Q 017069 356 DIAPKVPFH 364 (378)
Q Consensus 356 ~r~P~~~~~ 364 (378)
|+|+|.++
T Consensus 241 -r~p~~~~~ 248 (248)
T PRK06072 241 -REPKFKGI 248 (248)
T ss_pred -CCCCCCCC
Confidence 89999864
No 53
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=6.2e-51 Score=379.89 Aligned_cols=246 Identities=21% Similarity=0.276 Sum_probs=214.3
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
|.++.+++|++||||||+ .|+||.+|+.+|.++++.++.|+++++|||||.|++||+|.|+.++.. .....+
T Consensus 3 v~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~ 74 (251)
T TIGR03189 3 VWLERDGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAM 74 (251)
T ss_pred EEEEeeCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHH
Confidence 678889999999999997 699999999999999999999999999999999999999999987531 111223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHH
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (378)
...+..++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++++|++++|.. +++|+
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~~a~~l~ 153 (251)
T TIGR03189 75 LASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRVAAEDLL 153 (251)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHHHHHHHH
Confidence 444567888899999999999999999999999999999999999999999999999987 4678999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 274 (378)
+||++++|+||+++||||+|+|+.+ + .+++
T Consensus 154 ltg~~~~a~eA~~~Glv~~v~~~~~-~---~a~~---------------------------------------------- 183 (251)
T TIGR03189 154 YSGRSIDGAEGARIGLANAVAEDPE-N---AALA---------------------------------------------- 183 (251)
T ss_pred HcCCCCCHHHHHHCCCcceecCcHH-H---HHHH----------------------------------------------
Confidence 9999999999999999999998532 1 1110
Q ss_pred HHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHH-HHHHHHHHccccCCCCcHHhhHhhhhc
Q 017069 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLV-REYRMSLQGVSRLISGDFYEGVRARMV 353 (378)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~-~e~~~~~~~~~~~~~~d~~egv~afl~ 353 (378)
.++++|++.||.+++.+|++++.....++++.+. .|...+..++. ++|++||+++|+
T Consensus 184 ------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~- 241 (251)
T TIGR03189 184 ------------------WFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMA---THDAVEGLNAFL- 241 (251)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhC---CHhHHHHHHHHH-
Confidence 1258899999999999999999887778887663 67777777776 999999999999
Q ss_pred CCCCCCCCCC
Q 017069 354 DRDIAPKVPF 363 (378)
Q Consensus 354 ek~r~P~~~~ 363 (378)
+| |+|.|.+
T Consensus 242 ek-r~p~~~~ 250 (251)
T TIGR03189 242 EK-RPALWED 250 (251)
T ss_pred hc-CCCCCCC
Confidence 88 8999975
No 54
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-50 Score=380.24 Aligned_cols=256 Identities=23% Similarity=0.247 Sum_probs=225.6
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
....+.++.+++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... ...+.
T Consensus 4 ~~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~ 82 (260)
T PRK07827 4 VDTLVRYAVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGG-DPYDA 82 (260)
T ss_pred CCcceEEEeeCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhccc-CchhH
Confidence 44568899999999999999999999999999999999999999999999999999999999999998754210 11112
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHH
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 191 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~ 191 (378)
...+...+.++++.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++++++..++
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~ 162 (260)
T PRK07827 83 AVARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAA 162 (260)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHH
Confidence 23345566778899999999999999999999999999999999999999999999999999999999999998765599
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|+.++|+||+++||||+++++ +++.
T Consensus 163 ~l~l~g~~~~a~eA~~~Glv~~v~~~--l~~~------------------------------------------------ 192 (260)
T PRK07827 163 RYYLTGEKFGAAEAARIGLVTAAADD--VDAA------------------------------------------------ 192 (260)
T ss_pred HHHHhCCccCHHHHHHcCCcccchHH--HHHH------------------------------------------------
Confidence 99999999999999999999998742 4321
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+.+++++|++.+|.+++.+|+++++.....+++.++.|...+..++. ++|+++|+++|
T Consensus 193 -------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~af 250 (260)
T PRK07827 193 -------------------VAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV---SDEAREGMTAF 250 (260)
T ss_pred -------------------HHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 22368899999999999999999998888899999999998888887 99999999999
Q ss_pred hcCCCCCCCCC
Q 017069 352 MVDRDIAPKVP 362 (378)
Q Consensus 352 l~ek~r~P~~~ 362 (378)
+ +| |+|+|.
T Consensus 251 ~-~k-r~p~~~ 259 (260)
T PRK07827 251 L-QK-RPPRWA 259 (260)
T ss_pred h-cC-CCCCCC
Confidence 9 88 889995
No 55
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=1.2e-50 Score=380.95 Aligned_cols=255 Identities=22% Similarity=0.279 Sum_probs=221.8
Q ss_pred CCCceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChH
Q 017069 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (378)
Q Consensus 32 ~~~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (378)
+.+.|.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... ...
T Consensus 7 ~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~- 84 (265)
T PLN02888 7 SENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFK-GDV- 84 (265)
T ss_pred CCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhcc-chh-
Confidence 456778885 78999999999999999999999999999999999999999999999999999999998653211 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-
Q 017069 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (378)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (378)
. ....+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 85 --~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 159 (265)
T PLN02888 85 --K---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANR 159 (265)
T ss_pred --h---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHH
Confidence 1 1124556678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+++|++||++++|+||+++||||+|||++++.+.
T Consensus 160 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~---------------------------------------------- 193 (265)
T PLN02888 160 AREVSLTAMPLTAETAERWGLVNHVVEESELLKK---------------------------------------------- 193 (265)
T ss_pred HHHHHHhCCccCHHHHHHcCCccEeeChHHHHHH----------------------------------------------
Confidence 9999999999999999999999999998766432
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
+.+++++|++.+|.+++.+|++++.....+++++++.|...+..++. ..++|++||++
T Consensus 194 ---------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~-~~~~d~~e~~~ 251 (265)
T PLN02888 194 ---------------------AREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYN-GMTKEQFQKMQ 251 (265)
T ss_pred ---------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc-cCCHHHHHHHH
Confidence 22368999999999999999999988888899999999887766641 13899999999
Q ss_pred hhhcCCCCCCCCCC
Q 017069 350 ARMVDRDIAPKVPF 363 (378)
Q Consensus 350 afl~ek~r~P~~~~ 363 (378)
+|+ +| |+|+-.+
T Consensus 252 af~-ek-r~~~~~~ 263 (265)
T PLN02888 252 EFI-AG-RSSKKPS 263 (265)
T ss_pred HHH-hc-CCCCCCC
Confidence 999 88 7776443
No 56
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.5e-51 Score=381.03 Aligned_cols=249 Identities=23% Similarity=0.222 Sum_probs=215.6
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... . ...
T Consensus 2 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~---~-~~~ 77 (254)
T PRK08259 2 SMSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGR---G-NRL 77 (254)
T ss_pred CceEEEEEECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhccc---c-hhh
Confidence 456889999999999999999999999999999999999999999999999999999999999999875321 1 111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
... ....+...+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.+|++++|++++|.. +.
T Consensus 78 ~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~ 155 (254)
T PRK08259 78 HPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAM 155 (254)
T ss_pred hhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHH
Confidence 100 011112233479999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|+.++|+||+++||||+|||++++.+..
T Consensus 156 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a----------------------------------------------- 188 (254)
T PRK08259 156 DLILTGRPVDADEALAIGLANRVVPKGQARAAA----------------------------------------------- 188 (254)
T ss_pred HHHHcCCccCHHHHHHcCCCCEeeChhHHHHHH-----------------------------------------------
Confidence 999999999999999999999999988774322
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
.+++++|++.||.+++.+|++++.....+++++++.|...+...+ .+|++||+++|
T Consensus 189 --------------------~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~~egi~af 244 (254)
T PRK08259 189 --------------------EELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL----AAEALEGAARF 244 (254)
T ss_pred --------------------HHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH----hhHHHHHHHHH
Confidence 236899999999999999999998878889999999988766655 49999999999
Q ss_pred hcCCCCCC
Q 017069 352 MVDRDIAP 359 (378)
Q Consensus 352 l~ek~r~P 359 (378)
+ +|+|+|
T Consensus 245 ~-~~~~~~ 251 (254)
T PRK08259 245 A-AGAGRH 251 (254)
T ss_pred H-hhhccc
Confidence 9 664655
No 57
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.4e-51 Score=377.39 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=215.1
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
+.++++++|++||||||++.|++|.+|+.+|.+++++++.+ ++++|||||.|++||+|+|+++... ...+
T Consensus 2 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~ 71 (243)
T PRK07854 2 IGVTRDGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDF 71 (243)
T ss_pred ceEEEeCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHH
Confidence 56788999999999999999999999999999999999865 8999999999999999999985210 1223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHH
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (378)
...+..+++++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 72 ~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ 151 (243)
T PRK07854 72 PDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAML 151 (243)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHH
Confidence 34456788889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 274 (378)
+||++++|+||+++||||+|++ ++ ++
T Consensus 152 ltg~~~~a~eA~~~Glv~~v~~---~~---~a------------------------------------------------ 177 (243)
T PRK07854 152 LGAEKLTAEQALATGMANRIGT---LA---DA------------------------------------------------ 177 (243)
T ss_pred HcCCCcCHHHHHHCCCcccccC---HH---HH------------------------------------------------
Confidence 9999999999999999999965 21 11
Q ss_pred HHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcC
Q 017069 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVD 354 (378)
Q Consensus 275 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~e 354 (378)
.+++++|++.+|.+++.+|++++.. ..++++++.|...+..++. ++|++||+++|+ +
T Consensus 178 -----------------~~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~ 234 (243)
T PRK07854 178 -----------------QAWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA---SQDAIEAQVARI-E 234 (243)
T ss_pred -----------------HHHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-C
Confidence 1358899999999999999999875 5689999999998888887 999999999999 8
Q ss_pred CCCCCCCCC
Q 017069 355 RDIAPKVPF 363 (378)
Q Consensus 355 k~r~P~~~~ 363 (378)
| |+|.|++
T Consensus 235 k-r~p~~~~ 242 (243)
T PRK07854 235 K-RPPKFQG 242 (243)
T ss_pred C-CCCCCCC
Confidence 8 8999975
No 58
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=1.9e-50 Score=378.36 Aligned_cols=252 Identities=30% Similarity=0.431 Sum_probs=224.0
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
+..+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.. .......
T Consensus 4 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~ 80 (257)
T COG1024 4 YETILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAA 80 (257)
T ss_pred CCeeEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHH
Confidence 4578888989999999999999999999999999999999999999999999999999999999999874 1112222
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
..+....+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~ 160 (257)
T COG1024 81 ENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAK 160 (257)
T ss_pred HHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHH
Confidence 25666777899999999999999999999999999999999999999999999999999999889999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
+|++||+.++|+||+++|||++++++ +++.+...
T Consensus 161 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~--------------------------------------------- 195 (257)
T COG1024 161 ELLLTGEPISAAEALELGLVDEVVPDAEELLERAL--------------------------------------------- 195 (257)
T ss_pred HHHHcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999986 45543222
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+++++++. +|.++..+|+.++......+++.+..|...+...+. ++|++||+++
T Consensus 196 ----------------------~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~eg~~a 249 (257)
T COG1024 196 ----------------------ELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS---SEDFREGVRA 249 (257)
T ss_pred ----------------------HHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc---ChhHHHHHHH
Confidence 24566666 999999999999998777799999999988887665 9999999999
Q ss_pred hhcCCCCCCCC
Q 017069 351 RMVDRDIAPKV 361 (378)
Q Consensus 351 fl~ek~r~P~~ 361 (378)
|+ + |+|.|
T Consensus 250 ~~-~--r~p~~ 257 (257)
T COG1024 250 FL-E--RKPVF 257 (257)
T ss_pred HH-c--cCCCC
Confidence 99 6 79988
No 59
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.1e-51 Score=379.05 Aligned_cols=246 Identities=22% Similarity=0.332 Sum_probs=219.6
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
|++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... .
T Consensus 1 m~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~-~--- 76 (249)
T PRK05870 1 MMDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGR-P--- 76 (249)
T ss_pred CCccEEEEccCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhccccc-c---
Confidence 345688999999999999999999999999999999999999999999999999999999999999987642111 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
....+..+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a 156 (249)
T PRK05870 77 AEDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVA 156 (249)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHH
Confidence 122344456677789999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
+++++||++++|+||+++||||+++ +++.+ +
T Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv--~~l~~--~--------------------------------------------- 187 (249)
T PRK05870 157 RAALLFGMRFDAEAAVRHGLALMVA--DDPVA--A--------------------------------------------- 187 (249)
T ss_pred HHHHHhCCccCHHHHHHcCCHHHHH--hhHHH--H---------------------------------------------
Confidence 9999999999999999999999999 44532 1
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~-~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
+.+++++|++.+|.+++.+|++++.... .+++++++.|.+.+...+. ++|++||++
T Consensus 188 --------------------a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~ 244 (249)
T PRK05870 188 --------------------ALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ---SPEFAARLA 244 (249)
T ss_pred --------------------HHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc---ChhHHHHHH
Confidence 1236899999999999999999998877 7899999999999888887 999999999
Q ss_pred hhhcC
Q 017069 350 ARMVD 354 (378)
Q Consensus 350 afl~e 354 (378)
+|+ +
T Consensus 245 af~-~ 248 (249)
T PRK05870 245 AAQ-R 248 (249)
T ss_pred HHh-c
Confidence 998 5
No 60
>PLN02921 naphthoate synthase
Probab=100.00 E-value=2.9e-50 Score=387.06 Aligned_cols=259 Identities=18% Similarity=0.223 Sum_probs=219.0
Q ss_pred CCCceEEEe--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCC
Q 017069 32 LCNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK 108 (378)
Q Consensus 32 ~~~~v~~~~--~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~ 108 (378)
.++.|.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~ 141 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVG 141 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccc
Confidence 577889988 589999999999999999999999999999999999999999999999 8999999999764210 011
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchH
Q 017069 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (378)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (378)
......+ ....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 142 ~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~ 219 (327)
T PLN02921 142 PDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQ 219 (327)
T ss_pred hhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCH
Confidence 1111111 12456778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhc
Q 017069 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (378)
Q Consensus 189 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 267 (378)
. +++|+++|+.++|+||+++||||+|+|++++++..
T Consensus 220 ~~A~ellltG~~~~A~eA~~~GLV~~vv~~~~l~~~a------------------------------------------- 256 (327)
T PLN02921 220 KKAREMWFLARFYTASEALKMGLVNTVVPLDELEGET------------------------------------------- 256 (327)
T ss_pred HHHHHHHHcCCcCCHHHHHHCCCceEEeCHHHHHHHH-------------------------------------------
Confidence 9 99999999999999999999999999987764322
Q ss_pred CCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhh
Q 017069 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEG 347 (378)
Q Consensus 268 ~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~eg 347 (378)
.+++++|++++|.+++.+|++++..... .....+.+...+..++. ++|++||
T Consensus 257 ------------------------~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~eg 308 (327)
T PLN02921 257 ------------------------VKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYG---SEEGNEG 308 (327)
T ss_pred ------------------------HHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhc---CHHHHHH
Confidence 2368999999999999999999987543 33333334456666665 9999999
Q ss_pred HhhhhcCCCCCCCCCCCCC
Q 017069 348 VRARMVDRDIAPKVPFHLS 366 (378)
Q Consensus 348 v~afl~ek~r~P~~~~~~~ 366 (378)
+++|+ +| |+|.|.+.+.
T Consensus 309 i~Af~-ek-r~p~f~~~~~ 325 (327)
T PLN02921 309 RTAYL-EG-RAPDFSKFPR 325 (327)
T ss_pred HHHHh-cc-CCCCCCCCCC
Confidence 99999 88 8999987543
No 61
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-50 Score=376.66 Aligned_cols=245 Identities=22% Similarity=0.288 Sum_probs=216.2
Q ss_pred CceEEEeeCC---EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChH
Q 017069 34 NQVLVEGKAN---SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (378)
Q Consensus 34 ~~v~~~~~~~---v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~ 110 (378)
+.|.++.+++ |++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++..... ..
T Consensus 3 ~~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~--~~- 79 (251)
T PRK06023 3 DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAM--GG- 79 (251)
T ss_pred ceEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccc--cc-
Confidence 3588888774 99999999999999999999999999999999999999999999999999999998753211 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-
Q 017069 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (378)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~- 189 (378)
..+...+..++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|..
T Consensus 80 --~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~ 157 (251)
T PRK06023 80 --TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQR 157 (251)
T ss_pred --hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHH
Confidence 11223445678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCC
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 269 (378)
+.+++++|+.++|+||+++||||+|||++++++.
T Consensus 158 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~---------------------------------------------- 191 (251)
T PRK06023 158 AFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAE---------------------------------------------- 191 (251)
T ss_pred HHHHHHhCCCCCHHHHHHcCCcceeeCHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999998776432
Q ss_pred CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHh
Q 017069 270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVR 349 (378)
Q Consensus 270 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~ 349 (378)
+.+++++|++.+|.+++.+|++++... ..+.+.++.|.+.+..++. ++|++||++
T Consensus 192 ---------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~---~~~~~e~~~ 246 (251)
T PRK06023 192 ---------------------TLKAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK---SAEARAAFE 246 (251)
T ss_pred ---------------------HHHHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 123689999999999999999998764 4688888888888888876 999999999
Q ss_pred hhhcCC
Q 017069 350 ARMVDR 355 (378)
Q Consensus 350 afl~ek 355 (378)
+|+ +|
T Consensus 247 af~-e~ 251 (251)
T PRK06023 247 AFM-RR 251 (251)
T ss_pred HHh-cC
Confidence 999 54
No 62
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=1.7e-50 Score=376.26 Aligned_cols=244 Identities=30% Similarity=0.481 Sum_probs=227.7
Q ss_pred EEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHH
Q 017069 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF 116 (378)
Q Consensus 37 ~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~ 116 (378)
.|+.+++|++|+||+|++.|++|.+++.+|.++|+.++.|+++++||++|.|++||+|.|++++... ..+....+.
T Consensus 1 ~~~~~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~ 76 (245)
T PF00378_consen 1 KYEIEDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFF 76 (245)
T ss_dssp EEEEETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHH
T ss_pred CEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccc
Confidence 4789999999999999989999999999999999999999999999999999999999999998764 345566788
Q ss_pred HHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHh
Q 017069 117 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLAL 195 (378)
Q Consensus 117 ~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~l 195 (378)
..++.++.++..+||||||+|||+|+|||++++++||+||++++++|++||+++|++|++|++++|+|++|.. +.++++
T Consensus 77 ~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l 156 (245)
T PF00378_consen 77 RRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLL 156 (245)
T ss_dssp HHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeeccccccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHHH
Q 017069 196 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275 (378)
Q Consensus 196 tG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i 275 (378)
+|++++|+||+++||||+|+|++++.+..
T Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a--------------------------------------------------- 185 (245)
T PF00378_consen 157 TGEPISAEEALELGLVDEVVPDEELDEEA--------------------------------------------------- 185 (245)
T ss_dssp HTCEEEHHHHHHTTSSSEEESGGGHHHHH---------------------------------------------------
T ss_pred ccccchhHHHHhhcceeEEcCchhhhHHH---------------------------------------------------
Confidence 99999999999999999999998874322
Q ss_pred HHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcCC
Q 017069 276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVDR 355 (378)
Q Consensus 276 ~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ek 355 (378)
.++++++++.+|.+++.+|+.+++.....+.+.++.|...+..++. ++|++||+++|+ ||
T Consensus 186 ----------------~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~f~-eK 245 (245)
T PF00378_consen 186 ----------------LELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK---SEDFQEGIAAFL-EK 245 (245)
T ss_dssp ----------------HHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHH-TT
T ss_pred ----------------HHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---CHHHHHHHHHHh-Cc
Confidence 2368999999999999999999999888899999999999999997 999999999999 76
No 63
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.5e-50 Score=383.35 Aligned_cols=259 Identities=20% Similarity=0.224 Sum_probs=216.1
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhh-HHHh---h-ccC
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS-LYHF---M-NQG 107 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~-~~~~---~-~~~ 107 (378)
++.+.++.+++|++||||||++.|+||.+|+.+|.++++.++.|++|++|||||.|++||+|+|+++ +... . ...
T Consensus 4 ~~~v~~~~~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~ 83 (298)
T PRK12478 4 FQTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDG 83 (298)
T ss_pred ceEEEEeccCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhccccc
Confidence 4568899999999999999999999999999999999999999999999999999999999999986 2110 0 000
Q ss_pred ChHHHHHH---HH---HHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEecccccc-CccCCcchHH
Q 017069 108 KLEECKDF---FR---TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASF 180 (378)
Q Consensus 108 ~~~~~~~~---~~---~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~-Gl~p~~g~~~ 180 (378)
.......+ .. ....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++ |+++ ++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~ 161 (298)
T PRK12478 84 RWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW 161 (298)
T ss_pred ccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH
Confidence 00001111 01 11235667889999999999999999999999999999999999999999997 8875 3333
Q ss_pred HHhhcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhH
Q 017069 181 YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR 259 (378)
Q Consensus 181 ~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (378)
+ +++|.. |++|++||++++|+||+++||||+|||++++++...
T Consensus 162 -~-~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~---------------------------------- 205 (298)
T PRK12478 162 -L-YRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEARVA---------------------------------- 205 (298)
T ss_pred -H-HHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHH----------------------------------
Confidence 2 458998 999999999999999999999999999887753222
Q ss_pred HHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHcccc
Q 017069 260 IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSR 338 (378)
Q Consensus 260 ~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~-~~~~~~l~~e~~~~~~~~~~ 338 (378)
+++++|+..||.+++.+|++++.... .+++++++.|...+..++.
T Consensus 206 ---------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~- 251 (298)
T PRK12478 206 ---------------------------------EVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN- 251 (298)
T ss_pred ---------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc-
Confidence 36889999999999999999998766 4699999999999988887
Q ss_pred CCCCcHH--------hhHhhhhcCCCCCCCCCCCCCC
Q 017069 339 LISGDFY--------EGVRARMVDRDIAPKVPFHLSL 367 (378)
Q Consensus 339 ~~~~d~~--------egv~afl~ek~r~P~~~~~~~~ 367 (378)
++|++ ||+++|+ +| |+|+|.+-...
T Consensus 252 --s~d~~e~~~~~~~egv~Af~-ek-R~p~f~~~~~~ 284 (298)
T PRK12478 252 --TPDALEFIRTAETQGVRAAV-ER-RDGPFGDYSQA 284 (298)
T ss_pred --ChhHHHHHHHHHHHHHHHHH-Hh-cCCcccccCcC
Confidence 99997 5999999 88 99999986333
No 64
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.7e-50 Score=371.89 Aligned_cols=242 Identities=20% Similarity=0.201 Sum_probs=212.7
Q ss_pred EeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHH
Q 017069 39 EGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (378)
Q Consensus 39 ~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (378)
+++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++... ........+...
T Consensus 7 ~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~ 82 (249)
T PRK07938 7 TPEPGIAEVTVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRG 82 (249)
T ss_pred ccCCCEEEEEECCCC-cccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHH
Confidence 457899999999997 5999999999999999999999999999999999999999999987531 111222223344
Q ss_pred HHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcC
Q 017069 119 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG 197 (378)
Q Consensus 119 ~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG 197 (378)
+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. +.+|+++|
T Consensus 83 ~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg 159 (249)
T PRK07938 83 CFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTA 159 (249)
T ss_pred HHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhC
Confidence 5667888999999999999999999999999999999999999999999999985 5567899999999 99999999
Q ss_pred CCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCHHHHHH
Q 017069 198 AKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIID 277 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~ 277 (378)
+.++|+||+++||||+|||++++++.
T Consensus 160 ~~~~a~eA~~~Glv~~vv~~~~l~~~------------------------------------------------------ 185 (249)
T PRK07938 160 ATITAAELHHFGSVEEVVPRDQLDEA------------------------------------------------------ 185 (249)
T ss_pred CcCCHHHHHHCCCccEEeCHHHHHHH------------------------------------------------------
Confidence 99999999999999999998776432
Q ss_pred HHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcCCCC
Q 017069 278 SLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVDRDI 357 (378)
Q Consensus 278 ~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ek~r 357 (378)
+.+++++|+..+|.+++.+|++++.....++++.++.|...+...+. ++|++||+++|+ +| |
T Consensus 186 -------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~-ek-r 247 (249)
T PRK07938 186 -------------ALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNL---AGVSDEHRDAFV-EK-R 247 (249)
T ss_pred -------------HHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHH-hc-C
Confidence 22368999999999999999999988788899999999888888776 999999999999 88 6
Q ss_pred CC
Q 017069 358 AP 359 (378)
Q Consensus 358 ~P 359 (378)
+|
T Consensus 248 ~p 249 (249)
T PRK07938 248 KA 249 (249)
T ss_pred CC
Confidence 66
No 65
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.2e-49 Score=372.24 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=217.4
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++ +++++|||+|.|++||+|+|++++...... ....
T Consensus 3 ~~~i~~~~~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~--~~~~ 78 (255)
T PRK07112 3 YQTIRVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPDA--GRAD 78 (255)
T ss_pred CceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhcccc--chhh
Confidence 456899999999999999999999999999999999999998 369999999999999999999987542111 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
......+..+++++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| ..+|++++|.. ++
T Consensus 79 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~ 157 (255)
T PRK07112 79 LIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAH 157 (255)
T ss_pred hhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHH
Confidence 11223345788889999999999999999999999999999999999999999999999999865 46799999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+++++|++++|+||+++||||+|+|+++.. ..
T Consensus 158 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~--~~---------------------------------------------- 189 (255)
T PRK07112 158 YMTLMTQPVTAQQAFSWGLVDAYGANSDTL--LR---------------------------------------------- 189 (255)
T ss_pred HHHHhCCcccHHHHHHcCCCceecCcHHHH--HH----------------------------------------------
Confidence 999999999999999999999999865421 11
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR 351 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af 351 (378)
+++++|++.+|.+++.+|++++.. ...+.+.++.|.+....++. ++|++||+.+|
T Consensus 190 ---------------------~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af 244 (255)
T PRK07112 190 ---------------------KHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA---DPENLRKIARY 244 (255)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc---ChHHHHHHHHH
Confidence 257899999999999999999875 45688999999988888887 99999999999
Q ss_pred hcCCCCCCCCCC
Q 017069 352 MVDRDIAPKVPF 363 (378)
Q Consensus 352 l~ek~r~P~~~~ 363 (378)
+ +| |+|.|..
T Consensus 245 ~-~k-r~p~~~~ 254 (255)
T PRK07112 245 V-ET-GKFPWEA 254 (255)
T ss_pred H-cC-CCCCCCC
Confidence 9 88 8999975
No 66
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=7e-50 Score=377.87 Aligned_cols=255 Identities=20% Similarity=0.244 Sum_probs=223.3
Q ss_pred CccccCCCceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC--CCcccCCChhhHHHh
Q 017069 27 SVTDDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHF 103 (378)
Q Consensus 27 ~~~~~~~~~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g--~~F~~G~Dl~~~~~~ 103 (378)
|+.+.+.+.|.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++++|||||.| ++||+|.|++++...
T Consensus 4 ~~~~~~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~ 82 (278)
T PLN03214 4 PSPPGATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP 82 (278)
T ss_pred CCCCCCCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc
Confidence 44556777899998 6899999999985 7999999999999999999999999999999997 699999999987531
Q ss_pred hccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCc-cCCcchHHHH
Q 017069 104 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYL 182 (378)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl-~p~~g~~~~l 182 (378)
....+....+......++.++..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|++++|
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l 160 (278)
T PLN03214 83 --KTSAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFM 160 (278)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHH
Confidence 1111222233333456778899999999999999999999999999999999999999999999999 5999999999
Q ss_pred hhcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHH
Q 017069 183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261 (378)
Q Consensus 183 ~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (378)
++++|.. +++|++||+.++|+||+++||||+|||++++.+ .
T Consensus 161 ~~~~G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~--~------------------------------------ 202 (278)
T PLN03214 161 GRVIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAAALME--A------------------------------------ 202 (278)
T ss_pred HHhcCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHH--H------------------------------------
Confidence 9999999 999999999999999999999999999876642 2
Q ss_pred HHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCC
Q 017069 262 IVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLIS 341 (378)
Q Consensus 262 ~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~ 341 (378)
+.+++++|++.+|.+++.+|+++++.....++++++.|.+.+...+. +
T Consensus 203 -----------------------------a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s 250 (278)
T PLN03214 203 -----------------------------AASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLS---E 250 (278)
T ss_pred -----------------------------HHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC---C
Confidence 22368899999999999999999988888899999999988888776 9
Q ss_pred CcHHhhHhhhhcCC
Q 017069 342 GDFYEGVRARMVDR 355 (378)
Q Consensus 342 ~d~~egv~afl~ek 355 (378)
+|++||+++|+ +|
T Consensus 251 ~d~~egi~afl-ek 263 (278)
T PLN03214 251 PSIIKALGGVM-ER 263 (278)
T ss_pred HHHHHHHHHHH-HH
Confidence 99999999999 76
No 67
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=2e-49 Score=378.93 Aligned_cols=259 Identities=16% Similarity=0.185 Sum_probs=218.0
Q ss_pred CCceEEEe--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-------CCcccCCChhhHHHh
Q 017069 33 CNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-------RAFCAGGDIVSLYHF 103 (378)
Q Consensus 33 ~~~v~~~~--~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-------~~F~~G~Dl~~~~~~ 103 (378)
+.++.+++ +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 44688888 899999999999999999999999999999999999999999999998 599999999875321
Q ss_pred h---ccCCh-H--HHHHH-HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEe-CceEEeccccccCccCC
Q 017069 104 M---NQGKL-E--ECKDF-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPD 175 (378)
Q Consensus 104 ~---~~~~~-~--~~~~~-~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~Gl~p~ 175 (378)
. ..... . ..... ......+...+..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 00000 0 00011 1112346677889999999999999999999999999999999 69999999999999999
Q ss_pred cchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCc
Q 017069 176 AGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKN 254 (378)
Q Consensus 176 ~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (378)
+|++++|++++|.. +++|++||+.++|+||+++||||++||++++++..
T Consensus 182 ~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a------------------------------ 231 (302)
T PRK08321 182 GYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEA------------------------------ 231 (302)
T ss_pred chHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHH------------------------------
Confidence 99999999999999 99999999999999999999999999987764322
Q ss_pred hhhhHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 017069 255 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQ 334 (378)
Q Consensus 255 ~~~~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~ 334 (378)
.+++++|++.+|.+++.+|++++.... ...+....|.+.+..
T Consensus 232 -------------------------------------~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~ 273 (302)
T PRK08321 232 -------------------------------------LEWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRL 273 (302)
T ss_pred -------------------------------------HHHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHH
Confidence 236899999999999999999987654 344445567777777
Q ss_pred ccccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 017069 335 GVSRLISGDFYEGVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 335 ~~~~~~~~d~~egv~afl~ek~r~P~~~~~ 364 (378)
++. ++|+++|+.+|+ +| |+|.|.+.
T Consensus 274 ~~~---~~d~~egi~af~-ek-r~p~~~~~ 298 (302)
T PRK08321 274 AYM---TDEAQEGRDAFL-EK-RDPDWSDF 298 (302)
T ss_pred Hhc---CHHHHHHHHHHh-cc-CCCCCCCC
Confidence 776 999999999999 88 89999875
No 68
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.6e-48 Score=363.47 Aligned_cols=244 Identities=19% Similarity=0.227 Sum_probs=219.8
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
++..+.++.+++|++|+||||++.|++|.+++.+|.+++++++.|+++++|||||.|++||+|.|++++.... .. .
T Consensus 3 ~~~~~~~~~~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~--~~-~- 78 (249)
T PRK07110 3 MKVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ--TG-K- 78 (249)
T ss_pred CCceEEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc--ch-h-
Confidence 4667889999999999999999999999999999999999999999999999999999999999999875421 11 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
..+. . +.++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 -~~~~-~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a 155 (249)
T PRK07110 79 -GTFT-E-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALG 155 (249)
T ss_pred -hhHh-h-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHH
Confidence 1122 2 5678889999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
.++++||++++|+||+++||||+|+|++++.+ +
T Consensus 156 ~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~--~--------------------------------------------- 188 (249)
T PRK07110 156 QEMLLTARYYRGAELKKRGVPFPVLPRAEVLE--K--------------------------------------------- 188 (249)
T ss_pred HHHHHcCCccCHHHHHHcCCCeEEeChHHHHH--H---------------------------------------------
Confidence 99999999999999999999999999877643 2
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+.++++++++.||.+++.+|+.++......+++.++.|...+...+. ++|++|||++
T Consensus 189 --------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~~ 245 (249)
T PRK07110 189 --------------------ALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH---QPEVKRRIES 245 (249)
T ss_pred --------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHhHHHHHHH
Confidence 12358999999999999999999998888999999999999998887 9999999997
Q ss_pred hh
Q 017069 351 RM 352 (378)
Q Consensus 351 fl 352 (378)
.-
T Consensus 246 ~~ 247 (249)
T PRK07110 246 LY 247 (249)
T ss_pred hc
Confidence 64
No 69
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-48 Score=362.34 Aligned_cols=232 Identities=23% Similarity=0.270 Sum_probs=209.1
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++... .....
T Consensus 3 ~~~v~~~~~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~~~~~ 78 (258)
T PRK06190 3 EPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGD----GSAYG 78 (258)
T ss_pred CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcc----cchhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999987532 11111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HH
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~ 191 (378)
. ...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++
T Consensus 79 -~-~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 156 (258)
T PRK06190 79 -A-QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRAR 156 (258)
T ss_pred -H-HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 1 23356778889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
+|++||++++|+||+++||||+++|++++++ .
T Consensus 157 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~---------------------------------------------- 188 (258)
T PRK06190 157 RMSLTGDFLDAADALRAGLVTEVVPHDELLP--R---------------------------------------------- 188 (258)
T ss_pred HHHHhCCccCHHHHHHcCCCeEecCHhHHHH--H----------------------------------------------
Confidence 9999999999999999999999999877643 2
Q ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccc
Q 017069 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS 337 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~ 337 (378)
+.+++++|++.+|.+++.+|++++.....++++.++.|...+...+.
T Consensus 189 -------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 235 (258)
T PRK06190 189 -------------------ARRLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNR 235 (258)
T ss_pred -------------------HHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHc
Confidence 22368999999999999999999998888999999999999988886
No 70
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=6.1e-47 Score=383.39 Aligned_cols=253 Identities=14% Similarity=0.074 Sum_probs=221.9
Q ss_pred eEEEeeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCceEEEEecCCCC-cccCCChhhH
Q 017069 36 VLVEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRA-FCAGGDIVSL 100 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~-------------Nal~~~~~~eL~~~l~~~~~-d~~v~~vvl~g~g~~-F~~G~Dl~~~ 100 (378)
+.++++++|++||||||++. |+|+.+|+.+|.+++.+++. |+++++|||||.|+. ||+|+|++..
T Consensus 260 v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~ 339 (546)
T TIGR03222 260 VAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLE 339 (546)
T ss_pred EEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccc
Confidence 44566889999999999999 99999999999999999984 599999999999987 9999999832
Q ss_pred HHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE-cceeechh-hcccccCCeEEE-------eCceEEeccccccC
Q 017069 101 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIG 171 (378)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav-~G~a~GgG-~~lal~~D~~ia-------~~~a~f~~pe~~~G 171 (378)
. ..+.......+...+.++.+|..+||||||+| ||+|+||| ++|+++||+||+ +++++|++||+++|
T Consensus 340 ~----~~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lG 415 (546)
T TIGR03222 340 A----HKDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFG 415 (546)
T ss_pred c----cccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccc
Confidence 1 11111112233344567889999999999999 89999999 999999999999 89999999999999
Q ss_pred ccCCcchHHHHhhcc-hHH-H--HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhcc
Q 017069 172 FHPDAGASFYLSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSD 247 (378)
Q Consensus 172 l~p~~g~~~~l~r~~-g~~-a--~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 247 (378)
++|++|++++|++++ |.. + .++++||+.++|+||+++|||++|+|++++++...
T Consensus 416 l~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~---------------------- 473 (546)
T TIGR03222 416 LYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIR---------------------- 473 (546)
T ss_pred cCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHH----------------------
Confidence 999999999999998 887 7 55999999999999999999999999988753222
Q ss_pred ccCCCCchhhhHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHH-HH
Q 017069 248 LVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LV 326 (378)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~-l~ 326 (378)
+++++|+++||.+++.+|++++.....+++++ +.
T Consensus 474 ---------------------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~ 508 (546)
T TIGR03222 474 ---------------------------------------------IALEERASFSPDALTGLEANLRFAGPETMETRIFG 508 (546)
T ss_pred ---------------------------------------------HHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHH
Confidence 36899999999999999999999999999999 99
Q ss_pred HHHHHHHHccccCCCCcHHh---hHhhhhcCCCCCCCCCCC
Q 017069 327 REYRMSLQGVSRLISGDFYE---GVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 327 ~e~~~~~~~~~~~~~~d~~e---gv~afl~ek~r~P~~~~~ 364 (378)
.|...+..++. ++|.+| |+++|+ || |+|+|+-+
T Consensus 509 ~e~~~~~~~~~---~~d~~e~~~g~~af~-ek-r~p~f~~~ 544 (546)
T TIGR03222 509 RLTAWQNWIFN---RPNAVGENGALKVYG-SG-KKAQFDME 544 (546)
T ss_pred HHHHHHHHHhc---CCcccchhhHHHHHc-cC-CCCCCCcc
Confidence 99999999997 999999 999999 88 89999753
No 71
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=1.1e-46 Score=382.85 Aligned_cols=257 Identities=15% Similarity=0.066 Sum_probs=223.0
Q ss_pred CCCceEEE--eeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCceEEEEecCC-CCcccC
Q 017069 32 LCNQVLVE--GKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSG-RAFCAG 94 (378)
Q Consensus 32 ~~~~v~~~--~~~~v~~Itln~p~~~-------------Nal~~~~~~eL~~~l~~~~~-d~~v~~vvl~g~g-~~F~~G 94 (378)
.|+.|.++ ++++|++||||||++. |+|+.+|+.+|.+++++++. |+++++|||||.| +.||+|
T Consensus 258 ~~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG 337 (550)
T PRK08184 258 RYRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLA 337 (550)
T ss_pred eeEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeC
Confidence 45445554 4689999999999988 68999999999999999986 7999999999999 599999
Q ss_pred CChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEc-ceeechh-hcccccCCeEEEe-------CceEEec
Q 017069 95 GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFAT 165 (378)
Q Consensus 95 ~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~-G~a~GgG-~~lal~~D~~ia~-------~~a~f~~ 165 (378)
+|++... . .+..........+..++.++..+||||||+|| |+|+||| ++|+++||+|||+ ++++|++
T Consensus 338 ~Dl~~~~-~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~ 413 (550)
T PRK08184 338 ADATLLA-H---KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITL 413 (550)
T ss_pred CChhhhc-c---cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEEC
Confidence 9987321 1 11111122334455678889999999999997 9999999 9999999999999 9999999
Q ss_pred cccccCccCCcchHHHHhhc-chHH-HHHH--HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHH
Q 017069 166 PETLIGFHPDAGASFYLSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEAC 241 (378)
Q Consensus 166 pe~~~Gl~p~~g~~~~l~r~-~g~~-a~~l--~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 241 (378)
||+++|++|++|++++|+++ +|.. |+++ ++||++++|+||+++||||+|+|++++++...
T Consensus 414 pe~~~Gl~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~---------------- 477 (550)
T PRK08184 414 SALNFGLYPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVR---------------- 477 (550)
T ss_pred ccccccCCCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHH----------------
Confidence 99999999999999999998 6998 8887 58999999999999999999999888754222
Q ss_pred HHHhccccCCCCchhhhHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCH
Q 017069 242 LEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF 321 (378)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~ 321 (378)
+++++|++.||.+++.+|++++.....++
T Consensus 478 ---------------------------------------------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~ 506 (550)
T PRK08184 478 ---------------------------------------------------IALEERASLSPDALTGMEANLRFAGPETM 506 (550)
T ss_pred ---------------------------------------------------HHHHHHHhCCHHHHHHHHHHHHhcCCCCH
Confidence 36899999999999999999999999999
Q ss_pred HHH-HHHHHHHHHHccccCCCCcHHh---hHhhhhcCCCCCCCCCCC
Q 017069 322 DEC-LVREYRMSLQGVSRLISGDFYE---GVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 322 ~~~-l~~e~~~~~~~~~~~~~~d~~e---gv~afl~ek~r~P~~~~~ 364 (378)
+++ +.+|.+.+..++. ++|.+| |+++|+ +| |+|+|.+.
T Consensus 507 ~~~~~~~e~~~~~~~~~---~~d~~e~~~g~~af~-ek-r~~~f~~~ 548 (550)
T PRK08184 507 ETRIFGRLTAWQNWIFQ---RPNAVGEKGALKVYG-TG-QKAQFDWN 548 (550)
T ss_pred HHHHHHHHHHHHHHHhc---CCcccccchHHHHhc-cC-CCCCCCCC
Confidence 999 9999999999887 999999 999999 88 99999864
No 72
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.9e-46 Score=341.36 Aligned_cols=215 Identities=20% Similarity=0.279 Sum_probs=189.4
Q ss_pred CCCceEEEee-----CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhcc
Q 017069 32 LCNQVLVEGK-----ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 106 (378)
Q Consensus 32 ~~~~v~~~~~-----~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~ 106 (378)
+++.|.++.. ++|++||||||++ |+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++...
T Consensus 1 ~~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~--- 76 (222)
T PRK05869 1 MNEFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTL--- 76 (222)
T ss_pred CccchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhcc---
Confidence 3556666655 7899999999985 999999999999999999999999999999999999999999987532
Q ss_pred CChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcc
Q 017069 107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 186 (378)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~ 186 (378)
...........+++++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++.+|++++
T Consensus 77 -~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~i 155 (222)
T PRK05869 77 -SAQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAA 155 (222)
T ss_pred -ChhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHh
Confidence 1122223344567788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHH
Q 017069 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 265 (378)
Q Consensus 187 g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
|.. +++++++|++++|+||+++||||+++|++++.+
T Consensus 156 g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~------------------------------------------- 192 (222)
T PRK05869 156 GPSRAKELVFSGRFFDAEEALALGLIDEMVAPDDVYD------------------------------------------- 192 (222)
T ss_pred CHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHHHH-------------------------------------------
Confidence 999 999999999999999999999999999877643
Q ss_pred hcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhc
Q 017069 266 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF 318 (378)
Q Consensus 266 ~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~ 318 (378)
.+.+++++|++.+|.+++.+|+++++..+
T Consensus 193 ------------------------~a~~~a~~ia~~~~~a~~~~K~~~~~~~~ 221 (222)
T PRK05869 193 ------------------------AAAAWARRFLDGPPHALAAAKAGISDVYE 221 (222)
T ss_pred ------------------------HHHHHHHHHHcCCHHHHHHHHHHHHHHhh
Confidence 22246899999999999999999987653
No 73
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=8e-45 Score=343.35 Aligned_cols=248 Identities=16% Similarity=0.178 Sum_probs=202.1
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEecC-CCCcccCCChhhHHHhhccC
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQG 107 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~-----d~~v~~vvl~g~-g~~F~~G~Dl~~~~~~~~~~ 107 (378)
-.|.++.+++|++|||| |++.|+||.+|+.+|.+++++++. |+++++|||+|. |++||+|+|++++.......
T Consensus 17 ~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~ 95 (287)
T PRK08788 17 LRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAG 95 (287)
T ss_pred eEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhcccc
Confidence 34566678899999996 889999999999999999999998 899999999999 79999999999875321111
Q ss_pred ChHHHHHHHHHHHHHHHHHh---cCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhh
Q 017069 108 KLEECKDFFRTLYSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 184 (378)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~---~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r 184 (378)
.......+...+...+.++. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++
T Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~ 175 (287)
T PRK08788 96 DRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLAR 175 (287)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHH
Confidence 11111222222333333333 799999999999999999999999999999999999999999999999999999999
Q ss_pred cchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHH
Q 017069 185 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV 263 (378)
Q Consensus 185 ~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (378)
++|.. +++|++||+.++|+||+++||||+++|++++++...
T Consensus 176 ~vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~el~~~a~-------------------------------------- 217 (287)
T PRK08788 176 RVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQGEAAVR-------------------------------------- 217 (287)
T ss_pred HhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHH--------------------------------------
Confidence 99999 999999999999999999999999999887643222
Q ss_pred HHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCc
Q 017069 264 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 343 (378)
Q Consensus 264 ~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 343 (378)
+++++|++. |.+....|+..+.....++.+.++.|......+++ ..+.
T Consensus 218 -----------------------------~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 265 (287)
T PRK08788 218 -----------------------------TFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ--LEEK 265 (287)
T ss_pred -----------------------------HHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh--cccc
Confidence 357888876 77777777777766667889999998888776665 2555
Q ss_pred HHhhHhhhh
Q 017069 344 FYEGVRARM 352 (378)
Q Consensus 344 ~~egv~afl 352 (378)
-.+-|..|.
T Consensus 266 ~~~~~~~~~ 274 (287)
T PRK08788 266 DLRTMERLV 274 (287)
T ss_pred cHHHHHHHH
Confidence 677777776
No 74
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.8e-45 Score=347.24 Aligned_cols=235 Identities=21% Similarity=0.260 Sum_probs=200.8
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhc-c-----
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-Q----- 106 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~-~----- 106 (378)
++.+.++.+++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... .
T Consensus 3 ~~~v~~~~~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 82 (288)
T PRK08290 3 YEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQ 82 (288)
T ss_pred CceEEEEeeCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCcccccccccccccccc
Confidence 4568999999999999999999999999999999999999999999999999999999999999998632110 0
Q ss_pred -----------CC-hHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccC
Q 017069 107 -----------GK-LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 174 (378)
Q Consensus 107 -----------~~-~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p 174 (378)
.. ..........+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~ 161 (288)
T PRK08290 83 HPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-P 161 (288)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-C
Confidence 00 0011112234456778889999999999999999999999999999999999999999999998 4
Q ss_pred CcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCC
Q 017069 175 DAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK 253 (378)
Q Consensus 175 ~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (378)
+ ++.+++++++|.. +++|++||+.++|+||+++||||++||++++++.
T Consensus 162 ~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~------------------------------ 210 (288)
T PRK08290 162 G-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAE------------------------------ 210 (288)
T ss_pred c-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHH------------------------------
Confidence 4 4567789999999 9999999999999999999999999998776432
Q ss_pred chhhhHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcC-CHHHHHHHHHHHH
Q 017069 254 NSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMS 332 (378)
Q Consensus 254 ~~~~~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~-~~~~~l~~e~~~~ 332 (378)
+.+++++|++.+|.+++.+|++++..... +++++++.|....
T Consensus 211 -------------------------------------a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~ 253 (288)
T PRK08290 211 -------------------------------------TLELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLH 253 (288)
T ss_pred -------------------------------------HHHHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 22368999999999999999999988765 6999999998888
Q ss_pred HHcc
Q 017069 333 LQGV 336 (378)
Q Consensus 333 ~~~~ 336 (378)
...+
T Consensus 254 ~~~~ 257 (288)
T PRK08290 254 QLGH 257 (288)
T ss_pred HHcc
Confidence 7766
No 75
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=7.7e-46 Score=321.78 Aligned_cols=260 Identities=22% Similarity=0.282 Sum_probs=235.5
Q ss_pred CCceEEEe----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccC
Q 017069 33 CNQVLVEG----KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107 (378)
Q Consensus 33 ~~~v~~~~----~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~ 107 (378)
..+|.+++ +.||.+|-||||.+.|+|+.-|+.+|.++++.+..|+.+++|+|.+.- +.||+|+||++... .
T Consensus 26 ~~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~----M 101 (291)
T KOG1679|consen 26 ANEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKT----M 101 (291)
T ss_pred CceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhc----C
Confidence 34566654 458999999999999999999999999999999999999999999975 89999999999764 3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcch
Q 017069 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (378)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (378)
+..+...|...+..++..+..+|.||||+|+|.|+|||++++++||+|+|+++++|+++|.+++++|++|++++|+|.+|
T Consensus 102 s~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg 181 (291)
T KOG1679|consen 102 SPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVG 181 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHh
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHh
Q 017069 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (378)
Q Consensus 188 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (378)
.. +++|++||+.+++.||...||||++|...+-.+...
T Consensus 182 ~alaKELIftarvl~g~eA~~lGlVnhvv~qneegdaa~----------------------------------------- 220 (291)
T KOG1679|consen 182 VALAKELIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAY----------------------------------------- 220 (291)
T ss_pred HHHHHhHhhhheeccchhHHhcchHHHHHhcCccccHHH-----------------------------------------
Confidence 99 999999999999999999999999998764322111
Q ss_pred cCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHh
Q 017069 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (378)
Q Consensus 267 f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 346 (378)
.-|.+++++|.-+.|.++++.|..++.+.+.++-.++..|..-..+.+. +.|.-|
T Consensus 221 ----------------------~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~---t~drLe 275 (291)
T KOG1679|consen 221 ----------------------QKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIP---TKDRLE 275 (291)
T ss_pred ----------------------HHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCc---HHHHHH
Confidence 1233579999999999999999999999999999999999888888886 999999
Q ss_pred hHhhhhcCCCCCCCCCCC
Q 017069 347 GVRARMVDRDIAPKVPFH 364 (378)
Q Consensus 347 gv~afl~ek~r~P~~~~~ 364 (378)
|+.+|. +| |+|.|+++
T Consensus 276 glaaf~-ek-r~p~y~G~ 291 (291)
T KOG1679|consen 276 GLAAFK-EK-RKPEYKGE 291 (291)
T ss_pred HHHHHH-hh-cCCCcCCC
Confidence 999999 88 89999864
No 76
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=2.1e-44 Score=379.49 Aligned_cols=286 Identities=18% Similarity=0.227 Sum_probs=222.7
Q ss_pred ceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 35 ~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
.+.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... .......
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~~~~ 85 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFA-APEEELS 85 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhcc-CCHHHHH
Confidence 467774 78999999999999999999999999999999999999999999999999999999998753211 1222334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
.+...++.++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. |++
T Consensus 86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~ 165 (715)
T PRK11730 86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALE 165 (715)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHH
Confidence 4555667788899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCH-HHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDP-SVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
|++||++++|+||+++||||+|||++++.+...++++.....+ .. .... .+...... .+.+..+++.
T Consensus 166 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~-------~~~~-~~~~~p~a--~~~~~~~~~~-- 233 (715)
T PRK11730 166 WIAAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLDW-------KARR-QPKLEPLK--LSKIEAMMSF-- 233 (715)
T ss_pred HHHcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCcc-------cccc-Cccccccc--ccchhHHHHH--
Confidence 9999999999999999999999999887654444431111000 00 0000 00000000 0000000000
Q ss_pred HHHHHHHHHhhccCCCcHHHHHH-HHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 272 VEEIIDSLESEASLINDPWCGST-LRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~~-a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
..+++. .++..++.|.++ .++++++.+...+++++++.|.+.+..++. ++|++||+++
T Consensus 234 -----------------~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~d~~egi~a 292 (715)
T PRK11730 234 -----------------TTAKGMVAQKAGKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAK---TNVARALVGI 292 (715)
T ss_pred -----------------HHHHHHHHHhhccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 111111 245566777777 567899988888999999999999999997 9999999999
Q ss_pred hhcCC
Q 017069 351 RMVDR 355 (378)
Q Consensus 351 fl~ek 355 (378)
|+ ++
T Consensus 293 F~-~~ 296 (715)
T PRK11730 293 FL-ND 296 (715)
T ss_pred HH-HH
Confidence 99 55
No 77
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-44 Score=344.56 Aligned_cols=217 Identities=20% Similarity=0.236 Sum_probs=186.1
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccC---C-
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---K- 108 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~---~- 108 (378)
++.|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++....... .
T Consensus 9 ~~~v~~e~~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~ 88 (302)
T PRK08272 9 LKTMTYEVTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGA 88 (302)
T ss_pred CCeEEEEeECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhcccccccccc
Confidence 567899999999999999999999999999999999999999999999999999999999999999886432100 0
Q ss_pred ---------------hHH--HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccC
Q 017069 109 ---------------LEE--CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 171 (378)
Q Consensus 109 ---------------~~~--~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G 171 (378)
... ...++..+++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~g 168 (302)
T PRK08272 89 YPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVW 168 (302)
T ss_pred cccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcc
Confidence 000 012344566778889999999999999999999999999999999999999999999986
Q ss_pred ccCCcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccC
Q 017069 172 FHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY 250 (378)
Q Consensus 172 l~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (378)
.+|+. ..+++++|.. |++|++||++++|+||+++||||+++|++++++..
T Consensus 169 g~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a-------------------------- 219 (302)
T PRK08272 169 GVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERT-------------------------- 219 (302)
T ss_pred cCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHH--------------------------
Confidence 66643 3578899999 99999999999999999999999999987764322
Q ss_pred CCCchhhhHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcC
Q 017069 251 PDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ 319 (378)
Q Consensus 251 ~~~~~~~~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~ 319 (378)
.+++++|++.||.+++.+|++++...+.
T Consensus 220 -----------------------------------------~~la~~ia~~~~~a~~~~K~~l~~~~~~ 247 (302)
T PRK08272 220 -----------------------------------------ERLVERIAAVPVNQLAMVKLAVNSALLQ 247 (302)
T ss_pred -----------------------------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2368999999999999999999987653
No 78
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-44 Score=332.94 Aligned_cols=225 Identities=15% Similarity=0.121 Sum_probs=197.8
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHH
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~ 112 (378)
++.+.++.+++|++|||||| +.|++|.+++.+|.++++.++ +++++|||+|.|++||+|+|++++... ....
T Consensus 2 ~~~i~~~~~~~v~~itln~~-~~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~ 73 (229)
T PRK06213 2 SELVSYTLEDGVATITLDDG-KVNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAA 73 (229)
T ss_pred cceEEEEecCCEEEEEeCCC-CCCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhH
Confidence 45688999999999999998 479999999999999999988 457999999999999999999987531 2233
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc-eEEeccccccCccCCcchHHHHhhcchHH-H
Q 017069 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (378)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a 190 (378)
..+...+.+++.++.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|+..++++++|.. +
T Consensus 74 ~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a 153 (229)
T PRK06213 74 IALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAF 153 (229)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHH
Confidence 345566678888999999999999999999999999999999999999 99999999999998888888899999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC
Q 017069 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (378)
Q Consensus 191 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 270 (378)
++++++|++++|+||+++||||+|+|++++.+ .
T Consensus 154 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~--~--------------------------------------------- 186 (229)
T PRK06213 154 QRAVINAEMFDPEEAVAAGFLDEVVPPEQLLA--R--------------------------------------------- 186 (229)
T ss_pred HHHHHcCcccCHHHHHHCCCceeccChHHHHH--H---------------------------------------------
Confidence 99999999999999999999999999877643 1
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 332 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~ 332 (378)
+.++++++++.+|.+++.+|++++......+.++++.|.+.+
T Consensus 187 --------------------a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~ 228 (229)
T PRK06213 187 --------------------AQAAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF 228 (229)
T ss_pred --------------------HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence 223688999999999999999999887777888888776643
No 79
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=4.8e-45 Score=319.58 Aligned_cols=264 Identities=21% Similarity=0.303 Sum_probs=229.4
Q ss_pred ccCCCceEEEe---eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhh-c
Q 017069 30 DDLCNQVLVEG---KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM-N 105 (378)
Q Consensus 30 ~~~~~~v~~~~---~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~-~ 105 (378)
.++++.+.+.+ +..|.++.||||.|.|+|+..|+.|+.++++.++.||++++|||+|+|++||+|+|+..+.... .
T Consensus 15 ~~s~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~ 94 (292)
T KOG1681|consen 15 DHSYKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRIL 94 (292)
T ss_pred ccccceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhcc
Confidence 34566555553 4579999999999999999999999999999999999999999999999999999987765331 1
Q ss_pred --c-----CChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcch
Q 017069 106 --Q-----GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA 178 (378)
Q Consensus 106 --~-----~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~ 178 (378)
+ .......++...+++-+..|.+||||||++|||+|+|+|..|..+||+|+|+++|.|+.-|+.+|+..+.|.
T Consensus 95 ~~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGT 174 (292)
T KOG1681|consen 95 QPEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGT 174 (292)
T ss_pred ccccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhh
Confidence 1 112345667778899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchHH--HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchh
Q 017069 179 SFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV 256 (378)
Q Consensus 179 ~~~l~r~~g~~--a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (378)
..+||..+|.+ ++++.+|++.|+|.||++.|||.+|+|+.+.. +..++
T Consensus 175 L~RlpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrvf~dk~~l-l~~~l----------------------------- 224 (292)
T KOG1681|consen 175 LNRLPKVVGNQSLARELAFTARKFSADEALDSGLVSRVFPDKEEL-LNGAL----------------------------- 224 (292)
T ss_pred HhhhhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhhcCCHHHH-HhhhH-----------------------------
Confidence 99999999964 99999999999999999999999999975532 22222
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHcc
Q 017069 257 IHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGV 336 (378)
Q Consensus 257 ~~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~ 336 (378)
.+|..|+.++|.++..||+.++++.+.+.++.|.+-.-+....+
T Consensus 225 ------------------------------------~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L 268 (292)
T KOG1681|consen 225 ------------------------------------PMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSML 268 (292)
T ss_pred ------------------------------------HHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999888887777
Q ss_pred ccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 017069 337 SRLISGDFYEGVRARMVDRDIAPKVPF 363 (378)
Q Consensus 337 ~~~~~~d~~egv~afl~ek~r~P~~~~ 363 (378)
. +.|+.+++.+-+ +|..++.|.+
T Consensus 269 ~---s~Dl~~av~a~m-~k~k~~tfsk 291 (292)
T KOG1681|consen 269 L---SDDLVKAVMAQM-EKLKTVTFSK 291 (292)
T ss_pred H---HHHHHHHHHHHh-hcCCCCCccc
Confidence 6 999999999999 6634454753
No 80
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.1e-42 Score=366.54 Aligned_cols=281 Identities=18% Similarity=0.212 Sum_probs=219.5
Q ss_pred ceEEEe-eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHH
Q 017069 35 QVLVEG-KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 35 ~v~~~~-~~~v~~Itln~p-~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
.+.++. +++|++|||||| ++.|+||.+|+.+|.++++.++.|+++++|||+|.+ ++||+|+|++++... .....
T Consensus 6 ~~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~---~~~~~ 82 (708)
T PRK11154 6 AFTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAAC---KTAQE 82 (708)
T ss_pred eEEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhcc---CCHHH
Confidence 466777 789999999999 589999999999999999999999999999999975 899999999987532 11222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc--eEEeccccccCccCCcchHHHHhhcchHH
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL 189 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (378)
...+....+.++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~ 162 (708)
T PRK11154 83 AEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS 162 (708)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHH
Confidence 2334455667888999999999999999999999999999999999996 59999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcC
Q 017069 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (378)
Q Consensus 190 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 268 (378)
|++|++||++++|+||+++||||+++|++++.+...++++........ .+ ... ...+
T Consensus 163 ~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~------------~~----~~~------~~~~ 220 (708)
T PRK11154 163 TALDMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRP------------LP----VRE------RLLE 220 (708)
T ss_pred HHHHHHHhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCc------------CC----chh------hhcc
Confidence 999999999999999999999999999988765444443210000000 00 000 0000
Q ss_pred CCCH--HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHh
Q 017069 269 LDTV--EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (378)
Q Consensus 269 ~~~~--~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 346 (378)
.+.. ..+++ .+.+.+++-.+..-.|...+|++++.+...+++++++.|.+.+..++. ++|+++
T Consensus 221 ~~p~~~~~~~~------------~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~ 285 (708)
T PRK11154 221 GNPLGRALLFK------------QARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAM---TPESAA 285 (708)
T ss_pred cCchhHHHHHH------------HHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHH
Confidence 0000 11111 111122222332346899999999999888999999999999999997 999999
Q ss_pred hHhhhhcCC
Q 017069 347 GVRARMVDR 355 (378)
Q Consensus 347 gv~afl~ek 355 (378)
++++|+.++
T Consensus 286 ~~~aF~~~~ 294 (708)
T PRK11154 286 LRSIFFATT 294 (708)
T ss_pred HHHHHHHHH
Confidence 999999664
No 81
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.8e-42 Score=329.26 Aligned_cols=285 Identities=17% Similarity=0.269 Sum_probs=210.7
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF 122 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 122 (378)
+++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ........+...++.+
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l 116 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDM 116 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHH
Confidence 556999999999999999999999999999999999999999999 69999999998764321 1222334455556778
Q ss_pred HHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCCCCC
Q 017069 123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN 201 (378)
Q Consensus 123 ~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~ 201 (378)
+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. |++++++|++++
T Consensus 117 ~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~s 196 (360)
T TIGR03200 117 VSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWS 196 (360)
T ss_pred HHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHH-HHHHHHHhccccCCCC---chhhhHHHHHHHhcCCCCHHHHHH
Q 017069 202 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSV-IEACLEKYSDLVYPDK---NSVIHRIDIVDKCFGLDTVEEIID 277 (378)
Q Consensus 202 a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~f~~~~~~~i~~ 277 (378)
|+||+++|||++|+|+.+++. +-. .+|.. -..+++.|....+... .........++++= .....+
T Consensus 197 A~EA~~~GLVd~VVp~~~~~~--~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~l-- 265 (360)
T TIGR03200 197 AHKAKRLGIIMDVVPALKVDG--KFV-----ANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGT--IDLSLL-- 265 (360)
T ss_pred HHHHHHcCChheecCchhcCc--chh-----cCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhccc--chHhHH--
Confidence 999999999999999887731 000 01111 1122222222222111 11111112222110 111111
Q ss_pred HHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhhcCC
Q 017069 278 SLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARMVDR 355 (378)
Q Consensus 278 ~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl~ek 355 (378)
++-..+++.++....|..+.-+++-++.......+..-+.-+..+.--+ ..+..+|++||- ++
T Consensus 266 ----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~ 328 (360)
T TIGR03200 266 ----------DEAVEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM----MNEARTGFRAFN-EG 328 (360)
T ss_pred ----------HHHHHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc----ccccchhhHHHh-cc
Confidence 1122235677888889999999999987776655555444444443333 578899999999 63
No 82
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=4e-42 Score=361.39 Aligned_cols=278 Identities=18% Similarity=0.192 Sum_probs=217.0
Q ss_pred EEeeCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEE-ecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 38 VEGKANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 38 ~~~~~~v~~Itln~p-~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl-~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
.+.+++|++|||||| ++.|+||.+|+.+|.++++.++.|+++++||| +|.|++||+|+|++++... ........+
T Consensus 5 ~~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~ 81 (699)
T TIGR02440 5 TVREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKAL 81 (699)
T ss_pred EEcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHH
Confidence 345789999999999 68999999999999999999999999999986 6788999999999987532 112233344
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc--eEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
....+.++..+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|.. +++
T Consensus 82 ~~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~ 161 (699)
T TIGR02440 82 AQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALD 161 (699)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHH
Confidence 555677888999999999999999999999999999999999986 79999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCC--
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD-- 270 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-- 270 (378)
|+++|+.++|++|+++||||+++|++++.+....+++.. .......... .+.-+.+
T Consensus 162 llltG~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~----------------~~~~~~~~~~------~~~~~~~~~ 219 (699)
T TIGR02440 162 MILTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKG----------------KPIRKPLSLQ------ERLLEGTPL 219 (699)
T ss_pred HHHcCCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhC----------------CCCCCCccch------hhhcccCch
Confidence 999999999999999999999999988765444443210 0000000000 0000000
Q ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 271 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
....++ +++.+.+++-.+..-.|...+|++++.+...+++++++.|.+.+..++. ++|.++++++
T Consensus 220 a~~~~~------------~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~~ 284 (699)
T TIGR02440 220 GRALLF------------DQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVM---TPESAALRSI 284 (699)
T ss_pred hHHHHH------------HHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC---CHHHHHHHHH
Confidence 000010 1111222222333445788889999999999999999999999999997 9999999999
Q ss_pred hhcCC
Q 017069 351 RMVDR 355 (378)
Q Consensus 351 fl~ek 355 (378)
|+.++
T Consensus 285 f~~~~ 289 (699)
T TIGR02440 285 FFATT 289 (699)
T ss_pred HHHHH
Confidence 99664
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=4.8e-41 Score=353.33 Aligned_cols=287 Identities=16% Similarity=0.213 Sum_probs=221.6
Q ss_pred ceEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 35 ~v~~~~-~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
.+.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... .......
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~ 85 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELI 85 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHH
Confidence 567774 78999999999999999999999999999999999999999999999999999999998853211 1222333
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
.+....+.++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. |.+
T Consensus 86 ~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~ 165 (714)
T TIGR02437 86 QWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALE 165 (714)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 4555667888999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhh-cCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCC
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 271 (378)
|++||++++|++|+++||||+++|++++.+...++... ...... ...... +...... .+.+..+|..
T Consensus 166 llltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~-------~~~~~~-~~~~~~~--~~~~~~~~~~-- 233 (714)
T TIGR02437 166 WIASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLD-------WKAKRQ-PKLEPLK--LSKIEAMMSF-- 233 (714)
T ss_pred HHHcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCc-------ccccCC-CCccccc--ccchHHHHHH--
Confidence 99999999999999999999999988876544444311 000000 000000 0000000 0001111111
Q ss_pred HHHHHHHHHhhccCCCcHHHHH-HHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhh
Q 017069 272 VEEIIDSLESEASLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRA 350 (378)
Q Consensus 272 ~~~i~~~l~~~~~~~~~~~a~~-~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~a 350 (378)
+++.+ ..++...+.|...+. .+++..+...+++++++.|.+.|.+++. +++.++.++.
T Consensus 234 -----------------~~~~~~~~~~~~~~~pap~~~-~~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~~l~~~ 292 (714)
T TIGR02437 234 -----------------TTAKGMVAQVAGPHYPAPMTA-VKTIEKAARFGRDKALEIEAKGFVKLAK---TSEAKALIGL 292 (714)
T ss_pred -----------------HHHHHHHHHhhcCCCCCHHHH-HHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 11122 234445555544444 5688888888999999999999999998 9999999999
Q ss_pred hhcCC
Q 017069 351 RMVDR 355 (378)
Q Consensus 351 fl~ek 355 (378)
|+.++
T Consensus 293 ff~~r 297 (714)
T TIGR02437 293 FLNDQ 297 (714)
T ss_pred HhhhH
Confidence 99654
No 84
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=303.45 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=226.5
Q ss_pred CCceEEEeeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln-~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
++.+.+++++++.+|.+| ||++.|+++.+++.++..+|+.+..|+++..++++|.|++||+|.|+..+......+..+.
T Consensus 6 ~~~~vv~~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~ 85 (266)
T KOG0016|consen 6 YREIVVTRENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEE 85 (266)
T ss_pred ccceEEEecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCccccc
Confidence 567889999999999999 9999999999999999999999999999999999999999999999998876543333322
Q ss_pred H---HHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchH
Q 017069 112 C---KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (378)
Q Consensus 112 ~---~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 188 (378)
. ..+...+..+...+..+|||+||+|||+|+|.|..+...||+|+|+|+++|..|+..+|..|.+|+++.+|+++|.
T Consensus 86 ~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~ 165 (266)
T KOG0016|consen 86 SDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGS 165 (266)
T ss_pred chhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhch
Confidence 2 2333444457888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhc
Q 017069 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (378)
Q Consensus 189 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 267 (378)
. |.+|++.|++++|+||.+.|||+++++.+++.+ +.+
T Consensus 166 ~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~--~v~---------------------------------------- 203 (266)
T KOG0016|consen 166 ASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNE--EVL---------------------------------------- 203 (266)
T ss_pred hhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHH--HHH----------------------------------------
Confidence 9 999999999999999999999999999987753 221
Q ss_pred CCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhh
Q 017069 268 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEG 347 (378)
Q Consensus 268 ~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~eg 347 (378)
+.++++++.+|.+++..|++++......+..+.+.|.+.....|. ++|+.+.
T Consensus 204 -------------------------~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~---s~e~~~~ 255 (266)
T KOG0016|consen 204 -------------------------KKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV---SAECLAR 255 (266)
T ss_pred -------------------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc---ChHHHHH
Confidence 236888999999999999999999888999999999999999998 9999999
Q ss_pred HhhhhcCC
Q 017069 348 VRARMVDR 355 (378)
Q Consensus 348 v~afl~ek 355 (378)
+.+|+ .|
T Consensus 256 ~~~~~-~~ 262 (266)
T KOG0016|consen 256 FKQYL-SK 262 (266)
T ss_pred HHHHh-cc
Confidence 99999 54
No 85
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=5.3e-41 Score=310.75 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=156.7
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCce-EEEEecCCCCcccCCChhhHHHhhccCChHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~-~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 114 (378)
+.++.+++|++|+||||++ |+||.+|+.+|.++++.++.|++++ +||++|.|++||+|+|++++... .........
T Consensus 2 ~~~~~~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~ 78 (239)
T PLN02267 2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHL 78 (239)
T ss_pred ceeEecCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHH
Confidence 5678889999999999984 9999999999999999999998865 77889999999999999986421 112222233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEe-CceEEeccccccCccCCcchHHHHhhcchHH-H-H
Q 017069 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-G-E 191 (378)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a-~ 191 (378)
+...+++++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+++++.++++++|.. + +
T Consensus 79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~ 158 (239)
T PLN02267 79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARR 158 (239)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHH
Confidence 44556778889999999999999999999999999999999998 5689999999999974444578899999988 7 6
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCC-CChh
Q 017069 192 FLALTGAKLNGAEMMACGLATHYSVS-EKLP 221 (378)
Q Consensus 192 ~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~ 221 (378)
+++++|++++|+||+++||||+++|+ +++.
T Consensus 159 ~llltG~~~~a~eA~~~Glv~~vv~~~~~l~ 189 (239)
T PLN02267 159 DVLLRAAKLTAEEAVEMGIVDSAHDSAEETV 189 (239)
T ss_pred HHHHcCCcCCHHHHHHCCCcceecCCHHHHH
Confidence 89999999999999999999999985 4453
No 86
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=2.2e-40 Score=349.09 Aligned_cols=294 Identities=18% Similarity=0.216 Sum_probs=215.0
Q ss_pred CceEEEeeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEE-EEecCCCCcccCCChhhHHHhhccCChHH
Q 017069 34 NQVLVEGKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFV-SMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~-~~Nal~~~~~~eL~~~l~~~~~d~~v~~v-vl~g~g~~F~~G~Dl~~~~~~~~~~~~~~ 111 (378)
+.+.++.+++|++||||||+ +.|+||.+++.+|.++++.++.|+++++| |++|.|++||+|+|++++... .....
T Consensus 13 ~~~~~~~~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~ 89 (737)
T TIGR02441 13 THRHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQE 89 (737)
T ss_pred CeEEEEEECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHH
Confidence 56888999999999999998 58999999999999999999999999965 679999999999999988531 12233
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc--eEEeccccccCccCCcchHHHHhhcchHH
Q 017069 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL 189 (378)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~ 189 (378)
...+....+.++.++.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|..
T Consensus 90 ~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~ 169 (737)
T TIGR02441 90 VTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVP 169 (737)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHH
Confidence 3455566778899999999999999999999999999999999999997 58999999999999999999999999998
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCC--CCh---hH-HHHHHhhhcCCCHHHHHH---HHHHhccccCCCCchhhhH
Q 017069 190 -GEFLALTGAKLNGAEMMACGLATHYSVS--EKL---PL-IEEELGKLVTDDPSVIEA---CLEKYSDLVYPDKNSVIHR 259 (378)
Q Consensus 190 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~--~~l---~~-~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 259 (378)
|.+|+++|++++|+||+++||||+|+|+ +++ ++ ..+.+..........+.. ..+++..... .....
T Consensus 170 ~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~-~~~~~--- 245 (737)
T TIGR02441 170 AALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVH-KITQY--- 245 (737)
T ss_pred HHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccC-ccchh---
Confidence 9999999999999999999999999986 221 11 011111000000000000 0000000000 00000
Q ss_pred HHHHHHhcCC-CCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHcccc
Q 017069 260 IDIVDKCFGL-DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSR 338 (378)
Q Consensus 260 ~~~~~~~f~~-~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~ 338 (378)
..+. .....+++.. ..++.++...+.|...+ +.+++..+...++++++..|.+.|.+++.
T Consensus 246 ------~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~~Ap~~-~l~~v~~~~~~~~~~gl~~E~~~f~~l~~- 306 (737)
T TIGR02441 246 ------VMTNPFVRQQVYKTA-----------EDKVMKQTKGLYPAPLK-ILDVVRTGYDQGPDAGYEAESKAFGELSM- 306 (737)
T ss_pred ------hcccchhHHHHHHHH-----------HHHHHHhccCCCccHHH-HHHHHHHHhcCCHHHHHHHHHHHHHHHhC-
Confidence 0000 0011111111 11223333333554444 46788888888999999999999999998
Q ss_pred CCCCcHHhhHhhhhcCC
Q 017069 339 LISGDFYEGVRARMVDR 355 (378)
Q Consensus 339 ~~~~d~~egv~afl~ek 355 (378)
|++.+.-++.|+.++
T Consensus 307 --s~~a~al~~~f~~~~ 321 (737)
T TIGR02441 307 --TFESKALIGLFHGQT 321 (737)
T ss_pred --CHHHHHHHHHHHHHH
Confidence 999999999999764
No 87
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=1.8e-41 Score=295.00 Aligned_cols=260 Identities=19% Similarity=0.257 Sum_probs=211.2
Q ss_pred CCCceEEEee-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecC--C-CCcccCCChhhHHHhhccC
Q 017069 32 LCNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--G-RAFCAGGDIVSLYHFMNQG 107 (378)
Q Consensus 32 ~~~~v~~~~~-~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~--g-~~F~~G~Dl~~~~~~~~~~ 107 (378)
.++.|.|++. ++|+.||||||+.+|+|.+.++.||.++|..+..|++|.+|||||. | .+||+|+|-+-......-.
T Consensus 16 ~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~ 95 (282)
T COG0447 16 GYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYV 95 (282)
T ss_pred CcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCcc
Confidence 5788999997 9999999999999999999999999999999999999999999985 5 7999999976543210000
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcch
Q 017069 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (378)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g 187 (378)
+.+.... -...++.+.|+.+||||||.|+|+|+|||-.|-+.||+.||+++|+|+....++|-+-++.++..|.|.+|
T Consensus 96 ~d~~~~r--LnvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VG 173 (282)
T COG0447 96 DDDGIPR--LNVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVG 173 (282)
T ss_pred CCccCcc--cchhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhh
Confidence 1111111 12335667789999999999999999999999999999999999999999999999987778888999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHh
Q 017069 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 266 (378)
Q Consensus 188 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (378)
.. |+++.+.++.++|+||+++|+||.|||.++|++ +.+
T Consensus 174 qKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~~LE~--e~v--------------------------------------- 212 (282)
T COG0447 174 QKKAREIWFLCRQYDAEEALDMGLVNTVVPHADLEK--ETV--------------------------------------- 212 (282)
T ss_pred hhhhHHhhhhhhhccHHHHHhcCceeeeccHHHHHH--HHH---------------------------------------
Confidence 99 999999999999999999999999999988863 211
Q ss_pred cCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHh
Q 017069 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 346 (378)
Q Consensus 267 f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 346 (378)
++++.|..+||.|++..|..+|...+ -..+++ |+..-..++ .+.+++.+|
T Consensus 213 --------------------------~W~~E~l~kSP~AlR~LK~Afnad~D--GlaG~q-~~ag~at~L-~YmTdEa~E 262 (282)
T COG0447 213 --------------------------QWAREMLAKSPTALRMLKAAFNADCD--GLAGLQ-ELAGNATLL-YYMTDEAQE 262 (282)
T ss_pred --------------------------HHHHHHHhcChHHHHHHHHHhcCCCc--hhhHHH-HhcccceEE-EEechhhhh
Confidence 25888999999999999998885432 222222 222222222 235999999
Q ss_pred hHhhhhcCCCCCCCCCCCCC
Q 017069 347 GVRARMVDRDIAPKVPFHLS 366 (378)
Q Consensus 347 gv~afl~ek~r~P~~~~~~~ 366 (378)
|-.||+ || |+|.|..-+.
T Consensus 263 Gr~AF~-eK-R~Pdf~~fp~ 280 (282)
T COG0447 263 GRDAFL-EK-RKPDFSKFPR 280 (282)
T ss_pred hHHHHh-hc-cCCChHhcCC
Confidence 999999 99 9999986543
No 88
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=281.33 Aligned_cols=255 Identities=19% Similarity=0.242 Sum_probs=224.3
Q ss_pred CceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHH
Q 017069 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (378)
Q Consensus 34 ~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 113 (378)
...+++.+++|..|+|++|+|.|.++.+|+.+|.+.|....++.++|+|||+..|+.||+|.||+++.+. ...+...
T Consensus 32 ~~g~~~~~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~d~ha 108 (287)
T KOG1682|consen 32 DLGLVKEHNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGSDIHA 108 (287)
T ss_pred cccccccccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccchHHH
Confidence 3456667799999999999999999999999999999999888999999999999999999999998753 3345556
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHH
Q 017069 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (378)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~ 192 (378)
..+....+++.-|+++|+||||-|||+|..+|+.|...||+++|+++++|..|...+|++...-+.. |.|.++.. +.+
T Consensus 109 evFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGvA-laRavpRkva~~ 187 (287)
T KOG1682|consen 109 EVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGVA-LARAVPRKVAAY 187 (287)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcchh-HhhhcchhHHHH
Confidence 7788888999999999999999999999999999999999999999999999999999976655444 78888888 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhccccCCCCchhhhHHHHHHHhcCCCCH
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 272 (378)
|++||.+++++||+..|||.+|||.++++...+
T Consensus 188 ML~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~----------------------------------------------- 220 (287)
T KOG1682|consen 188 MLMTGLPITGEEALISGLVSKVVPAEELDKEIE----------------------------------------------- 220 (287)
T ss_pred HHHhCCCCchHHHHHhhhhhhcCCHHHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999998863222
Q ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhhh
Q 017069 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRARM 352 (378)
Q Consensus 273 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~afl 352 (378)
+++.+|...|...+.+.|+.+......+--+++..-.+....-+. -.|.+|||.+|+
T Consensus 221 --------------------~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~q---l~d~kegiasf~ 277 (287)
T KOG1682|consen 221 --------------------EITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQ---LGDTKEGIASFF 277 (287)
T ss_pred --------------------HHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc---ccchHHHHHHHh
Confidence 246778888888888999988888777778888877777777776 899999999999
Q ss_pred cCCCCCCCCCCC
Q 017069 353 VDRDIAPKVPFH 364 (378)
Q Consensus 353 ~ek~r~P~~~~~ 364 (378)
+| |+|.|.|.
T Consensus 278 -~k-rp~~~~h~ 287 (287)
T KOG1682|consen 278 -EK-RPPNWKHQ 287 (287)
T ss_pred -cc-CCCCcCCC
Confidence 98 99999873
No 89
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=1.8e-38 Score=285.05 Aligned_cols=188 Identities=32% Similarity=0.505 Sum_probs=172.2
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
+.++++++|++|+||+|++.|++|.+++.+|.++++.++.|+++++|||||.|+.||+|+|++++...... .+....+
T Consensus 1 i~~~~~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~--~~~~~~~ 78 (195)
T cd06558 1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA--GEEARAF 78 (195)
T ss_pred CEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc--chhHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999998754211 1135667
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHH
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 194 (378)
...++.++.++..++||+||+|||+|+|+|++++++||+||++++++|++||+++|++|++|++++|++++|.. +.+++
T Consensus 79 ~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~ 158 (195)
T cd06558 79 IRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELL 158 (195)
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEE 225 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~ 225 (378)
++|+.++|+||+++|||+++++.+++.+...
T Consensus 159 l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~ 189 (195)
T cd06558 159 LTGRRISAEEALELGLVDEVVPDEELLAAAL 189 (195)
T ss_pred HcCCccCHHHHHHcCCCCeecChhHHHHHHH
Confidence 9999999999999999999999877754333
No 90
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=5e-38 Score=318.52 Aligned_cols=196 Identities=14% Similarity=0.163 Sum_probs=164.8
Q ss_pred ccCCCceEEEeeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHh-cCCCceEEEEecC-CCCcccCCCh
Q 017069 30 DDLCNQVLVEGKANSRMAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGS-GRAFCAGGDI 97 (378)
Q Consensus 30 ~~~~~~v~~~~~~~v~~Itln~p~----------~~Nal~~~~~~eL~~~l~~~~-~d~~v~~vvl~g~-g~~F~~G~Dl 97 (378)
++.++.+.++.+++|++||||||+ +.|+||.+|+.+|.++|+.++ .|+++++|||||. |++||+|+|+
T Consensus 7 ~~~~~~v~~~~~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL 86 (546)
T TIGR03222 7 PSQYRHWKLTFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANI 86 (546)
T ss_pred CCCCceEEEEeeCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCH
Confidence 345778999999999999999975 899999999999999999999 7899999999997 5899999999
Q ss_pred hhHHHhhccCChHHHHHHH-HHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc--eEEeccccc-cCcc
Q 017069 98 VSLYHFMNQGKLEECKDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFH 173 (378)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~Gl~ 173 (378)
+++...... .......+. .....+.+.+..+||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++
T Consensus 87 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~ 165 (546)
T TIGR03222 87 FMLGLSTHA-WKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVL 165 (546)
T ss_pred HHHhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcC
Confidence 987431100 011111111 11234556678899999999999999999999999999999986 799999997 9999
Q ss_pred CCcchHHHHh--hcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHH
Q 017069 174 PDAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 226 (378)
Q Consensus 174 p~~g~~~~l~--r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~ 226 (378)
|++|+..++. +++|.. |++|++||+.++|+||+++||||+|||++++++...+
T Consensus 166 P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~ 221 (546)
T TIGR03222 166 PGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAE 221 (546)
T ss_pred CccchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHH
Confidence 9999999887 689998 9999999999999999999999999998887654433
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=8.4e-37 Score=310.57 Aligned_cols=193 Identities=15% Similarity=0.172 Sum_probs=162.3
Q ss_pred cCCCceEEEeeCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHh-cCCCceEEEEecCC-CCcccCCChh
Q 017069 31 DLCNQVLVEGKANSRMAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGSG-RAFCAGGDIV 98 (378)
Q Consensus 31 ~~~~~v~~~~~~~v~~Itln~p-------~---~~Nal~~~~~~eL~~~l~~~~-~d~~v~~vvl~g~g-~~F~~G~Dl~ 98 (378)
..++.+.++.+++|++|||||| + +.|+|+.+|+.+|.++++.++ .|+++++|||||.+ ++||+|+|++
T Consensus 12 ~~~~~~~~e~~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~ 91 (550)
T PRK08184 12 SQYRHWKLSFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIF 91 (550)
T ss_pred CCCceEEEEeeCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHH
Confidence 3477899999999999999965 3 899999999999999999999 78999999999985 8999999999
Q ss_pred hHHHhhccCChHHHHHHHH-HHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc--eEEeccccc-cCccC
Q 017069 99 SLYHFMNQGKLEECKDFFR-TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHP 174 (378)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~Gl~p 174 (378)
++...... .......+.. ....+...+..+||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P 170 (550)
T PRK08184 92 MLGGSSHA-WKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP 170 (550)
T ss_pred hHhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCC
Confidence 87432110 0011111111 1123455678899999999999999999999999999999987 899999997 99999
Q ss_pred CcchHHHHh--hcchHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHH
Q 017069 175 DAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE 224 (378)
Q Consensus 175 ~~g~~~~l~--r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~ 224 (378)
++|++++++ +++|.. +.+|++||+.++|+||+++||||++||++++++..
T Consensus 171 ~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a 223 (550)
T PRK08184 171 GTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKV 223 (550)
T ss_pred CcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHH
Confidence 999999998 779998 99999999999999999999999999988775433
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.79 E-value=3.3e-19 Score=157.89 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcce
Q 017069 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (378)
Q Consensus 61 ~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~ 140 (378)
-.+.+|.++++.+.+|+++++|||++ +|.|+|+.... .+.+++..+..++|||||+|+|.
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~ 81 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGN 81 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCc
Confidence 35789999999999999999999997 68898876421 23345666778999999999999
Q ss_pred eechhhcccccCCeEEEeCceEEeccccccCccCCcchHH--------HHhhcch--HH-HHHHHhcCCCCCHHHHHHcC
Q 017069 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACG 209 (378)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~--------~l~r~~g--~~-a~~l~ltG~~~~a~eA~~~G 209 (378)
|.|+|+.|+++||++++++++.|+.+.+..+..+...... .+++..| .. ..+++..|..++|++|++.|
T Consensus 82 a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~G 161 (177)
T cd07014 82 AASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANG 161 (177)
T ss_pred hhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcC
Confidence 9999999999999999999999999987766433222222 3444445 55 78888999999999999999
Q ss_pred ccceecCCCCh
Q 017069 210 LATHYSVSEKL 220 (378)
Q Consensus 210 lv~~vv~~~~l 220 (378)
|||++.+.+++
T Consensus 162 LVD~v~~~~e~ 172 (177)
T cd07014 162 LVDSLGSFDDA 172 (177)
T ss_pred CcccCCCHHHH
Confidence 99999987655
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.78 E-value=1.4e-18 Score=155.17 Aligned_cols=146 Identities=12% Similarity=0.072 Sum_probs=115.9
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|++|.++. .++..+...+.+.|+.+.+++ ++.|+|.=. |-|+++..- ..++
T Consensus 1 ~~vv~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~vvl~In----SpGG~v~~~-------------------~~i~ 51 (187)
T cd07020 1 VYVLEING-----AITPATADYLERAIDQAEEGG-ADALIIELD----TPGGLLDST-------------------REIV 51 (187)
T ss_pred CEEEEEee-----EEChHHHHHHHHHHHHHHhCC-CCEEEEEEE----CCCCCHHHH-------------------HHHH
Confidence 35667753 366777888999999998665 777777632 555555431 1234
Q ss_pred HHHhcCCCcEEEEEc---ceeechhhcccccCCeEEEeCceEEeccccccCccCCc--------------chHHHHhhcc
Q 017069 124 YLLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLP 186 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~--------------g~~~~l~r~~ 186 (378)
..+..+||||||+|+ |+|.|||+.++++||+++++++++|+.+++..|..+.. +....+++..
T Consensus 52 ~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 131 (187)
T cd07020 52 QAILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELR 131 (187)
T ss_pred HHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHc
Confidence 456679999999999 99999999999999999999999999999985554432 2455688888
Q ss_pred hH--H-HHHHHhcCCCCCHHHHHHcCccceecCCC
Q 017069 187 GH--L-GEFLALTGAKLNGAEMMACGLATHYSVSE 218 (378)
Q Consensus 187 g~--~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~ 218 (378)
|. . +.+++++|+.|+|+||+++||||+++++.
T Consensus 132 G~~~~~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~ 166 (187)
T cd07020 132 GRNAEWAEKAVRESLSLTAEEALKLGVIDLIAADL 166 (187)
T ss_pred CCCHHHHHHHHHcCCeecHHHHHHcCCcccccCCH
Confidence 86 5 88999999999999999999999999885
No 94
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.73 E-value=1.4e-17 Score=137.04 Aligned_cols=105 Identities=41% Similarity=0.723 Sum_probs=87.5
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHhhccCCCcHHHHHHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccc
Q 017069 258 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS 337 (378)
Q Consensus 258 ~~~~~~~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~ 337 (378)
.+...|++||+.+++++|+++|+. ...+|+.+.++.|.++||.|+++|.++++++...++.++++.|+++..+++.
T Consensus 4 ~~~~~I~~~F~~~s~~eI~~~L~~----~~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~ 79 (118)
T PF13766_consen 4 EHLEAIDRCFSADSVEEIIEALEA----DGDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR 79 (118)
T ss_dssp HCHHHHHHHTTSSSHHHHHHHHHH----HS-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHc----cCcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc
Confidence 457789999999999999999998 3789999999999999999999999999999999999999999999999997
Q ss_pred cCCCCcHHhhHhhhhcCCCCCCCCCCC--CCCCC
Q 017069 338 RLISGDFYEGVRARMVDRDIAPKVPFH--LSLPK 369 (378)
Q Consensus 338 ~~~~~d~~egv~afl~ek~r~P~~~~~--~~~~~ 369 (378)
.+||.|||+|.||+|+++|+|++. .+|+.
T Consensus 80 ---~~DF~EGVRA~LIDKd~~P~W~p~~l~~V~~ 110 (118)
T PF13766_consen 80 ---HPDFAEGVRALLIDKDKNPKWSPASLEDVSD 110 (118)
T ss_dssp ---CSCHHHHHHHHTTS-------SSSSCCCS-H
T ss_pred ---cchHHHHHHHHHhcCCCCCCCCCCChHHCCH
Confidence 899999999999999999999997 45543
No 95
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.60 E-value=2.8e-15 Score=136.33 Aligned_cols=157 Identities=18% Similarity=0.174 Sum_probs=108.6
Q ss_pred CEEEEEEcCC--CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHH
Q 017069 43 NSRMAILNRP--SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (378)
Q Consensus 43 ~v~~Itln~p--~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (378)
+|++|.++.| ...+.-+...+.+|.++|+.+..|+++++|||+ .||.|+|+..+.. +.
T Consensus 1 ~i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~~----------------~~ 60 (211)
T cd07019 1 SIGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASEV----------------IR 60 (211)
T ss_pred CEEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHHH----------------HH
Confidence 3556666543 122333455689999999999999999999998 6899999876431 22
Q ss_pred HHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccc------------cccCccCC---c-c-------
Q 017069 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE------------TLIGFHPD---A-G------- 177 (378)
Q Consensus 121 ~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe------------~~~Gl~p~---~-g------- 177 (378)
+.+..+..++||+||+++|.|.|+|+.|+++||++++++.+.|+.-- -++|+-+. . |
T Consensus 61 ~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~gsiGv~~~~~~~~~~l~k~Gv~~~~~~~~g~~k~~~~ 140 (211)
T cd07019 61 AELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 140 (211)
T ss_pred HHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEEEeEEEEEcCCHHHHHHhcCCceEEEEecCcccCCCC
Confidence 34556778899999999999999999999999999999998876322 12232111 1 1
Q ss_pred ------hHHHHhhc-----------------chHHHHHHHhcCCCCCHHHHHHcCccceecCCCC
Q 017069 178 ------ASFYLSHL-----------------PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 219 (378)
Q Consensus 178 ------~~~~l~r~-----------------~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~ 219 (378)
.-..+.+. +.....+-+..|..+++++|++.||||++..-++
T Consensus 141 ~~~s~e~r~~~~~~ld~~~~~f~~~Va~~R~~~~~~l~~~~~~~~~~~~~A~~~GLvD~i~~~~~ 205 (211)
T cd07019 141 RALPPEAQLGLQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDD 205 (211)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHhcCCcEEeHHHHHHcCCcccCCCHHH
Confidence 00111111 1112222356788999999999999999876443
No 96
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.51 E-value=8.7e-14 Score=121.14 Aligned_cols=134 Identities=14% Similarity=0.146 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 58 l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
++..++.+|.+.|+.++.|+.+++|+|.. .|.|+|+... ..+...+..++||||+.+
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~-------------------~~i~~~l~~~~kpvva~~ 64 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAG-------------------MNIVDALQASRKPVIAYV 64 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHH-------------------HHHHHHHHHhCCCEEEEE
Confidence 56688999999999999999999999987 4777776432 223445667789999999
Q ss_pred cceeechhhcccccCCeEEEeCceEEeccccccCccCCcchH------HH----Hhhc---------chHH-HHHHHhcC
Q 017069 138 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FY----LSHL---------PGHL-GEFLALTG 197 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~------~~----l~r~---------~g~~-a~~l~ltG 197 (378)
+|.|.++|+.|+++||.|++.+++.|++..+..+.....+-. .. ..+. .... ..+++..|
T Consensus 65 ~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~ 144 (161)
T cd00394 65 GGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKD 144 (161)
T ss_pred CChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC
Confidence 999999999999999999999999999988876554322000 01 1111 1223 45677789
Q ss_pred CCCCHHHHHHcCcccee
Q 017069 198 AKLNGAEMMACGLATHY 214 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~v 214 (378)
..++|+||+++||||++
T Consensus 145 ~~~~a~eA~~~GLvD~i 161 (161)
T cd00394 145 LVLTAQEALEYGLVDAL 161 (161)
T ss_pred cEEcHHHHHHcCCcCcC
Confidence 99999999999999985
No 97
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.49 E-value=3.1e-13 Score=123.22 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=73.2
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcC
Q 017069 51 RPSALNA-LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTH 129 (378)
Q Consensus 51 ~p~~~Na-l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 129 (378)
++...|+ ++..++.+|.++|+.++.|+++++|||+. +|.|+++.... .+...+..+..
T Consensus 14 ~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~~----------------~l~~~l~~~~~- 72 (214)
T cd07022 14 RGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGVF----------------ELADAIRAARA- 72 (214)
T ss_pred CCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHHH----------------HHHHHHHHHhc-
Confidence 4444454 45789999999999999999999999986 46676654321 12222333334
Q ss_pred CCcEEEEEcceeechhhcccccCCeEEEeCceEEecc
Q 017069 130 LKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 166 (378)
Q Consensus 130 ~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~p 166 (378)
+|||||+++|.|.|+|+.++++||++++++.+.|+..
T Consensus 73 ~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 73 GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 6999999999999999999999999999999987654
No 98
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.45 E-value=6e-13 Score=120.86 Aligned_cols=153 Identities=18% Similarity=0.139 Sum_probs=107.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|++|.++.+=... ...++.+|.++|+.+..|+++++|+|++ +|.|+|+.... .+.+.+
T Consensus 2 v~vi~i~g~i~~~--~~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~----------------~i~~~i 59 (208)
T cd07023 2 IAVIDIEGTISDG--GGIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE----------------EIYREI 59 (208)
T ss_pred EEEEEEEEEEcCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH----------------HHHHHH
Confidence 5677776542101 3689999999999999999999999998 48898876421 123345
Q ss_pred HHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEecccc------------ccCccCCcc--------------
Q 017069 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAG-------------- 177 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~~g-------------- 177 (378)
..+..++|||||+++|.|.|+|+.++++||++++++.+.|+..-+ ++|+-+..-
T Consensus 60 ~~~~~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~ 139 (208)
T cd07023 60 RRLRKAKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRP 139 (208)
T ss_pred HHHHhcCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCC
Confidence 567778999999999999999999999999999999988754222 133322110
Q ss_pred ----hHHHHhhcch-----------------HHHHHHHhcCCCCCHHHHHHcCccceecCCC
Q 017069 178 ----ASFYLSHLPG-----------------HLGEFLALTGAKLNGAEMMACGLATHYSVSE 218 (378)
Q Consensus 178 ----~~~~l~r~~g-----------------~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~ 218 (378)
....+..++. .....-++.|..+++++|++.||||++...+
T Consensus 140 ~s~~~~e~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~~ 201 (208)
T cd07023 140 LTEEERAILQALVDDIYDQFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGLD 201 (208)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCHH
Confidence 0111111111 1112235688899999999999999997643
No 99
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.43 E-value=4.5e-13 Score=116.58 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcce
Q 017069 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (378)
Q Consensus 61 ~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~ 140 (378)
.+...+.+.|+.+..+..+ .+.|.+.| +++.. ...+...+..+++|||+.++|.
T Consensus 15 ~~~~~~~~~l~~~~~~~~i-~l~inspG------G~~~~-------------------~~~i~~~i~~~~~pvi~~v~g~ 68 (160)
T cd07016 15 VTAKEFKDALDALGDDSDI-TVRINSPG------GDVFA-------------------GLAIYNALKRHKGKVTVKIDGL 68 (160)
T ss_pred cCHHHHHHHHHhccCCCCE-EEEEECCC------CCHHH-------------------HHHHHHHHHhcCCCEEEEEcch
Confidence 5677888888888876433 34445444 33321 1235556777899999999999
Q ss_pred eechhhcccccCCeEEEeCceEEeccccccCccCCcc---------------hHHHHhhcch--HH-HHHHHhcCCCCCH
Q 017069 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAG---------------ASFYLSHLPG--HL-GEFLALTGAKLNG 202 (378)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g---------------~~~~l~r~~g--~~-a~~l~ltG~~~~a 202 (378)
|.|+|+.++++||+|+++++++|+++....|..+... ....+.+..| .. ...++..+..++|
T Consensus 69 a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a 148 (160)
T cd07016 69 AASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTA 148 (160)
T ss_pred HHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcH
Confidence 9999999999999999999999999877766544332 1233666777 45 6777777778999
Q ss_pred HHHHHcCcccee
Q 017069 203 AEMMACGLATHY 214 (378)
Q Consensus 203 ~eA~~~Glv~~v 214 (378)
+||+++||||+|
T Consensus 149 ~eA~~~GliD~v 160 (160)
T cd07016 149 QEAVELGFADEI 160 (160)
T ss_pred HHHHHcCCCCcC
Confidence 999999999985
No 100
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.37 E-value=2.6e-12 Score=133.09 Aligned_cols=157 Identities=17% Similarity=0.212 Sum_probs=114.4
Q ss_pred eeCCEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHH
Q 017069 40 GKANSRMAILNRPS--ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR 117 (378)
Q Consensus 40 ~~~~v~~Itln~p~--~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~ 117 (378)
.+++|++|+++.+- ..+..+....+.+.+.|+.+..|++|++|||+-. |.|++.... .
T Consensus 306 ~~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e 365 (584)
T TIGR00705 306 VQDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------E 365 (584)
T ss_pred CCCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------H
Confidence 46789999999753 1333333345678889999999999999999975 334433210 1
Q ss_pred HHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEE------eccc------cccCccCCcchHHHHhh-
Q 017069 118 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYLSH- 184 (378)
Q Consensus 118 ~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f------~~pe------~~~Gl~p~~g~~~~l~r- 184 (378)
.+.+.+..+...+||||+.++|.|.+||+.++++||.++|++.+.+ +.+. .++|+.|....+..+..
T Consensus 366 ~i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~ 445 (584)
T TIGR00705 366 IIRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANV 445 (584)
T ss_pred HHHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCC
Confidence 1122333455678999999999999999999999999999998876 5553 57888877655443332
Q ss_pred ---------------------------------cchHHHHHHHhcCCCCCHHHHHHcCccceecC
Q 017069 185 ---------------------------------LPGHLGEFLALTGAKLNGAEMMACGLATHYSV 216 (378)
Q Consensus 185 ---------------------------------~~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~ 216 (378)
-+...+.+.+.+|+.++++||+++||||++..
T Consensus 446 s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig~ 510 (584)
T TIGR00705 446 SLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALGG 510 (584)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCCC
Confidence 22222566788999999999999999999953
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.35 E-value=9e-12 Score=113.03 Aligned_cols=148 Identities=16% Similarity=0.155 Sum_probs=102.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|++|+++.+= + ....+|.++|+.+..|+++++|||++. |.|+++... ..+.
T Consensus 2 v~vi~i~g~i-----~-~s~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~-------------------~~l~ 52 (207)
T TIGR00706 2 IAILPVSGAI-----A-VSPEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVAS-------------------EEIY 52 (207)
T ss_pred EEEEEEEEEE-----e-cCHHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHH-------------------HHHH
Confidence 6677776542 1 345788999999999999999999985 778776532 2233
Q ss_pred HHHhcCC--CcEEEEEcceeechhhcccccCCeEEEeCceEEeccccc------------cCccCC------------c-
Q 017069 124 YLLGTHL--KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD------------A- 176 (378)
Q Consensus 124 ~~i~~~~--kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl~p~------------~- 176 (378)
..|..++ ||+||.++|.|.|+|+.|+++||.+++++++.|+..-+. +|+-+. .
T Consensus 53 ~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~ 132 (207)
T TIGR00706 53 EKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPT 132 (207)
T ss_pred HHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCC
Confidence 3444555 999999999999999999999999999999877653322 233210 0
Q ss_pred -c----hHHHHh-----------------hcchHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 177 -G----ASFYLS-----------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 177 -g----~~~~l~-----------------r~~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
. .-..+. |-+.....+=++.|+.+++++|++.||||++...+++
T Consensus 133 ~~~s~~~~e~~~~~l~~~~~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~ 198 (207)
T TIGR00706 133 RELTPEERDILQNLVNESYEQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDA 198 (207)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHH
Confidence 0 001111 1222221223478999999999999999999875554
No 102
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.24 E-value=6.3e-11 Score=104.66 Aligned_cols=141 Identities=16% Similarity=0.234 Sum_probs=101.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|.+|.++. .+++.+...+.+.|+.+.+++ ++.|+|.=. |.|+++.. ...+.
T Consensus 1 v~vi~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~ivl~in----spGG~v~~-------------------~~~I~ 51 (178)
T cd07021 1 VYVIPIEG-----EIDPGLAAFVERALKEAKEEG-ADAVVLDID----TPGGRVDS-------------------ALEIV 51 (178)
T ss_pred CEEEEEee-----EECHHHHHHHHHHHHHHHhCC-CCeEEEEEE----CcCCCHHH-------------------HHHHH
Confidence 35666654 366788888999999998886 667766554 45555432 23355
Q ss_pred HHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcch--------HHH------HhhcchH-
Q 017069 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGH- 188 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~--------~~~------l~r~~g~- 188 (378)
..|..+++|||+.|+|.|.++|+.++++||++++++++.|+.+++- +..|. ... +...-|.
T Consensus 52 ~~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v----~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~ 127 (178)
T cd07021 52 DLILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPI----PGDGNGAADEKVQSYWRAKMRAAAEKKGRD 127 (178)
T ss_pred HHHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeE----cCCCccchhHHHHHHHHHHHHHHHHHhCCC
Confidence 6677899999999999999999999999999999999999988543 32222 111 1222232
Q ss_pred -H-HHHHHhcC-------------CCCCHHHHHHcCccceecCC
Q 017069 189 -L-GEFLALTG-------------AKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 189 -~-a~~l~ltG-------------~~~~a~eA~~~Glv~~vv~~ 217 (378)
. +..|+-.. -.++++||++.|++|.+.++
T Consensus 128 ~~~a~~mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 128 PDIAEAMVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred HHHHHHHhhhhcccccccccccceeeeCHHHHHHhCCeEEEECC
Confidence 2 44554443 27999999999999999875
No 103
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.19 E-value=7.2e-11 Score=108.26 Aligned_cols=142 Identities=12% Similarity=-0.001 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 58 l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
-+...+.+|.+.|+++..|++|++|||+..+..| ++.++.++ .+.+..+...+|||||.+
T Consensus 26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el-------------------~~~i~~~~~~~kpVia~~ 85 (222)
T cd07018 26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL-------------------RQALERFRASGKPVIAYA 85 (222)
T ss_pred cCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH-------------------HHHHHHHHHhCCeEEEEe
Confidence 4567789999999999999999999999988766 55555443 223334455799999999
Q ss_pred cceeechhhcccccCCeEEEeCceEEeccccc------------cCccCC---------cchHHH-----------Hh--
Q 017069 138 NGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGASFY-----------LS-- 183 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl~p~---------~g~~~~-----------l~-- 183 (378)
+| |.+||+.++++||.+++.+.+.|+..-+. +|+-+. .+..+. +.
T Consensus 86 ~~-~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~ 164 (222)
T cd07018 86 DG-YSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQAL 164 (222)
T ss_pred CC-CCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHH
Confidence 98 88999999999999999999998875332 222111 111110 11
Q ss_pred ---------------hcchHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 184 ---------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 184 ---------------r~~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
|.+.....+-+..|..+++++|++.||||++...+++
T Consensus 165 l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~ 216 (222)
T cd07018 165 LDSLWDQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL 216 (222)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence 1111221223456999999999999999999865544
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.78 E-value=8.1e-08 Score=84.17 Aligned_cols=144 Identities=10% Similarity=0.194 Sum_probs=103.3
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHH
Q 017069 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (378)
Q Consensus 45 ~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (378)
.+|.++. .+++.+...|.+.++.++++ .++.|+|.=. |-|+.+... ..++.
T Consensus 2 ~vi~i~G-----~I~~~~~~~l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~~-------------------~~I~~ 52 (172)
T cd07015 2 YVAQIKG-----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAA-------------------GNIVQ 52 (172)
T ss_pred EEEEEee-----EECHhHHHHHHHHHHHHhcC-CCCeEEEEEE----CCCCCHHHH-------------------HHHHH
Confidence 4566653 36777888889999998865 4677777654 556655432 22344
Q ss_pred HHhcCCCcEEEEEc---ceeechhhcccccCCeEEEeCceEEeccccccCccCC----c-c---hHHHHh------hcch
Q 017069 125 LLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----A-G---ASFYLS------HLPG 187 (378)
Q Consensus 125 ~i~~~~kP~Iaav~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~----~-g---~~~~l~------r~~g 187 (378)
.|...++||++.|. |.|..+|.-++++||.+++.+++.++...+..|..+. . . .+..+. +.-|
T Consensus 53 ~i~~~~~pvv~~v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~G 132 (172)
T cd07015 53 RIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESG 132 (172)
T ss_pred HHHhcCcCEEEEEecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHC
Confidence 55678999999999 9999999999999999999999999988775443220 0 0 011111 2223
Q ss_pred H--H-HHHHHhcCCCCCHHHHHHcCccceecCC
Q 017069 188 H--L-GEFLALTGAKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 188 ~--~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~ 217 (378)
. . +..++-....++|+||+++|++|.++.+
T Consensus 133 r~~~~a~~~v~~~~~lta~EA~~~G~iD~ia~~ 165 (172)
T cd07015 133 RNATIAEEFITKDLSLTPEEALKYGVIEVVARD 165 (172)
T ss_pred cCHHHHHHHHHhhcCcCHHHHHHcCCceeeeCC
Confidence 2 3 5677778889999999999999999986
No 105
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.64 E-value=3.3e-07 Score=79.88 Aligned_cols=134 Identities=13% Similarity=0.082 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 58 l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
++..+..++...|..++.++..+.|+|.=. |.|+++.. ...++..+..+++|+++.+
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~In----SpGG~v~~-------------------~~~i~~~i~~~~~~v~~~~ 65 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYIN----SPGGDVFA-------------------GMAIYDTIKFIKADVVTII 65 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCceEEE
Confidence 567888999999999998877776666544 55555432 1234455666889999999
Q ss_pred cceeechhhcccccCC--eEEEeCceEEeccccccCccCCcchHH---------------HHhhcch--HH-HHHHHhcC
Q 017069 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPG--HL-GEFLALTG 197 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~r~~g--~~-a~~l~ltG 197 (378)
.|.|.++|.-++++|| .|++.+++.|.+....-|......-.. .+.+.-| .. ...++-.+
T Consensus 66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~ 145 (162)
T cd07013 66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERD 145 (162)
T ss_pred EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCC
Confidence 9999999999999999 688888888886543322211100000 0111112 12 34455566
Q ss_pred CCCCHHHHHHcCcccee
Q 017069 198 AKLNGAEMMACGLATHY 214 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~v 214 (378)
.-++|+||+++||||++
T Consensus 146 ~~~sa~eA~~~GliD~i 162 (162)
T cd07013 146 TWLSAREAVEYGFADTI 162 (162)
T ss_pred ccccHHHHHHcCCCCcC
Confidence 66799999999999985
No 106
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.59 E-value=4.4e-07 Score=81.83 Aligned_cols=139 Identities=15% Similarity=0.066 Sum_probs=89.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017069 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaa 136 (378)
.++..+...+...|..++.++..+-|.|.=. |.|+|+.. ...++..|...+.|+++.
T Consensus 39 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~In----SpGG~v~~-------------------g~~I~d~i~~~~~~v~t~ 95 (200)
T PRK00277 39 EVEDHMANLIVAQLLFLEAEDPDKDIYLYIN----SPGGSVTA-------------------GLAIYDTMQFIKPDVSTI 95 (200)
T ss_pred EECHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCEEEE
Confidence 3788899999999988886543333333222 44445432 122334456678899999
Q ss_pred EcceeechhhcccccC--CeEEEeCceEEeccccccCccCCcch----H-----------HHHhhcchH--H-HHHHHhc
Q 017069 137 LNGVTMGGGAGVSIPG--TFRVACGKTVFATPETLIGFHPDAGA----S-----------FYLSHLPGH--L-GEFLALT 196 (378)
Q Consensus 137 v~G~a~GgG~~lal~~--D~~ia~~~a~f~~pe~~~Gl~p~~g~----~-----------~~l~r~~g~--~-a~~l~lt 196 (378)
+.|.|.+.|..|++++ +.|++.+++.|.+....-|......- + ..+....|. . ...++-.
T Consensus 96 ~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~ 175 (200)
T PRK00277 96 CIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDTDR 175 (200)
T ss_pred EEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhC
Confidence 9999999999998875 36788777777765543222110000 0 112222232 2 4455667
Q ss_pred CCCCCHHHHHHcCccceecCCC
Q 017069 197 GAKLNGAEMMACGLATHYSVSE 218 (378)
Q Consensus 197 G~~~~a~eA~~~Glv~~vv~~~ 218 (378)
+.-++|+||+++||||+|+.+.
T Consensus 176 ~~~lsa~EA~e~GliD~Ii~~~ 197 (200)
T PRK00277 176 DNFMSAEEAKEYGLIDEVLTKR 197 (200)
T ss_pred CccccHHHHHHcCCccEEeecC
Confidence 8889999999999999999753
No 107
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.53 E-value=3.6e-08 Score=94.05 Aligned_cols=169 Identities=19% Similarity=0.043 Sum_probs=139.6
Q ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhHHHhhccCChHHHHHHHHHHHH
Q 017069 43 NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS 121 (378)
Q Consensus 43 ~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 121 (378)
++..+.|+ |+ .|..|.++..+|..-++.++.+..+++.++|+.. +.|++|.|..+.... .......++..+.+
T Consensus 66 ~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg----~h~fspa~~m~LlE 139 (380)
T KOG1683|consen 66 GFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVG----MHFFSPAHWMQLLE 139 (380)
T ss_pred ccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcc----ccccCHHHHHHHHH
Confidence 67788888 55 6999999999999999999999988999999988 899999999988743 34445667778899
Q ss_pred HHHHHhcCCCcEEEEEcceeechh--hcccccCCeEEEeC--ceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhc
Q 017069 122 FIYLLGTHLKPHVAILNGVTMGGG--AGVSIPGTFRVACG--KTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT 196 (378)
Q Consensus 122 l~~~i~~~~kP~Iaav~G~a~GgG--~~lal~~D~~ia~~--~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~lt 196 (378)
++....+++.|+.+++||++-.|| +-++-+|+|++... .-..+..+...++..+..-.-.+...+|.. +-.-+--
T Consensus 140 ii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~~g~~~L~d 219 (380)
T KOG1683|consen 140 IILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFRVGERALAD 219 (380)
T ss_pred HHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCccccHHHHhh
Confidence 999999999999999999998888 88889999999984 444578888888543333344455566666 5556677
Q ss_pred CCCCCHHHHHHcCccceecCC
Q 017069 197 GAKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 197 G~~~~a~eA~~~Glv~~vv~~ 217 (378)
|.-++..||++.|+++++.+.
T Consensus 220 ~~gfdv~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 220 GVGFDVAEALAVGLGDEIGPR 240 (380)
T ss_pred ccCccHHHHHhhccchhccch
Confidence 899999999999999999986
No 108
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.44 E-value=1.4e-06 Score=78.91 Aligned_cols=137 Identities=14% Similarity=0.047 Sum_probs=96.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017069 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaa 136 (378)
.++..+..++...|..++..+..+.|.|.=. |.|+++..- ..++..|..++.|+++.
T Consensus 43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~~I~d~i~~~~~~v~t~ 99 (207)
T PRK12553 43 QVDDASANDVMAQLLVLESIDPDRDITLYIN----SPGGSVTAG-------------------DAIYDTIQFIRPDVQTV 99 (207)
T ss_pred eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe----CCCCcHHHH-------------------HHHHHHHHhcCCCcEEE
Confidence 3788999999999999987553344433332 445554321 22445566678899999
Q ss_pred EcceeechhhcccccCC--eEEEeCceEEecccccc-CccCCcchH------------------HHHhhcchH--H-HHH
Q 017069 137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLI-GFHPDAGAS------------------FYLSHLPGH--L-GEF 192 (378)
Q Consensus 137 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~-Gl~p~~g~~------------------~~l~r~~g~--~-a~~ 192 (378)
+.|.|.+.|.-|+++|| .|++.+++.|.+..... |. ..|-. ..+...-|. . ...
T Consensus 100 ~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~ 177 (207)
T PRK12553 100 CTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRK 177 (207)
T ss_pred EEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 99999999999999999 59999999999877653 21 12211 112222232 2 455
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCC
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSE 218 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~ 218 (378)
++-.+.-++|+||+++||||+|+++.
T Consensus 178 ~~~~~~~lta~EA~e~GliD~I~~~~ 203 (207)
T PRK12553 178 DTDRDKWLTAEEAKDYGLVDQIITSY 203 (207)
T ss_pred HHhcCccccHHHHHHcCCccEEcCch
Confidence 66678999999999999999999753
No 109
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.41 E-value=1.7e-06 Score=76.14 Aligned_cols=134 Identities=16% Similarity=0.087 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 58 l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
++.....++...|..+..++..+.|+|.=. |.|+|+..- ..++..+...+.|+++.+
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~~-------------------~~i~~~l~~~~~~v~t~~ 74 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYIN----SPGGSVTAG-------------------LAIYDTMQYIKPPVSTIC 74 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence 577888999999999988765555554433 445554321 123334556789999999
Q ss_pred cceeechhhcccccCC--eEEEeCceEEeccccccCccCCcchH---------------HHHhhcchH--H-HHHHHhcC
Q 017069 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH--L-GEFLALTG 197 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~r~~g~--~-a~~l~ltG 197 (378)
.|.|.++|.-+++++| .|++.+++.|.+.+...+..-...-. ..+....|. . ...++-.+
T Consensus 75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~ 154 (171)
T cd07017 75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRD 154 (171)
T ss_pred EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCC
Confidence 9999999999999999 79999999999888765543221000 001111121 2 34555678
Q ss_pred CCCCHHHHHHcCcccee
Q 017069 198 AKLNGAEMMACGLATHY 214 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~v 214 (378)
.-++|+||+++||||+|
T Consensus 155 ~~lta~EA~e~GiiD~V 171 (171)
T cd07017 155 RYMSAEEAKEYGLIDKI 171 (171)
T ss_pred ccccHHHHHHcCCCccC
Confidence 88999999999999986
No 110
>PRK10949 protease 4; Provisional
Probab=98.40 E-value=3.7e-06 Score=87.70 Aligned_cols=157 Identities=16% Similarity=0.186 Sum_probs=100.7
Q ss_pred eCCEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHH
Q 017069 41 KANSRMAILNRP-----SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (378)
Q Consensus 41 ~~~v~~Itln~p-----~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~ 115 (378)
.+.|++|+++.. ...+.++. +.+.+.|+++..|++||+|||+-. |.|+....
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~a---------------- 381 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTA---------------- 381 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHH----------------
Confidence 467888888742 12233444 467788999999999999999986 44443321
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEecccc------------ccCccCCcch-----
Q 017069 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAGA----- 178 (378)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~~g~----- 178 (378)
.+.+.+.+..+....||||+.+.|.|.-||+-++.+||.++|.+.+..+---+ ++|+-+..-.
T Consensus 382 se~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~ 461 (618)
T PRK10949 382 SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLA 461 (618)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccC
Confidence 11122233334557899999999999999999999999999998654333111 2343221100
Q ss_pred ------------HHHHh-----------------hcchHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 179 ------------SFYLS-----------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 179 ------------~~~l~-----------------r~~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
-..+. |.+.....+-+..|+.+++++|++.||||++-.-++.
T Consensus 462 ~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~~~~a 532 (618)
T PRK10949 462 DVSITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDA 532 (618)
T ss_pred CccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCCHHHH
Confidence 01111 1112221223568999999999999999998764443
No 111
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.37 E-value=1.1e-05 Score=75.10 Aligned_cols=139 Identities=17% Similarity=0.114 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 017069 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (378)
Q Consensus 55 ~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (378)
.-+++++-.....+.++.+++. .+-+|-|.-.++++. |.+.. .......+.+.+..+....+|+|
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~-~lPvV~lvDtpGa~~-g~~aE-------------~~G~~~~ia~~~~~~s~~~VP~I 140 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKF-GRPVVTFINTAGAYP-GVGAE-------------ERGQGEAIARNLMEMSDLKVPII 140 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CHhHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence 4567888899998888888765 355665544433332 33211 01123445566677788999999
Q ss_pred EEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccce
Q 017069 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213 (378)
Q Consensus 135 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~ 213 (378)
+.|-|.|.|||......||++++.+++.++. +.|.+++...+...--.. +.+.+ .+++.++.+.|+||+
T Consensus 141 sVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v------~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD~ 210 (256)
T PRK12319 141 AIIIGEGGSGGALALAVADQVWMLENTMYAV------LSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVDK 210 (256)
T ss_pred EEEeCCcCcHHHHHhhcCCEEEEecCceEEE------cCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCcE
Confidence 9999999988887778999999999987763 233343333333221112 33333 779999999999999
Q ss_pred ecCCC
Q 017069 214 YSVSE 218 (378)
Q Consensus 214 vv~~~ 218 (378)
|+++.
T Consensus 211 ii~e~ 215 (256)
T PRK12319 211 VIPEH 215 (256)
T ss_pred ecCCC
Confidence 99854
No 112
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.32 E-value=2.6e-06 Score=75.61 Aligned_cols=141 Identities=18% Similarity=0.199 Sum_probs=92.2
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCce--EEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHH
Q 017069 47 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (378)
Q Consensus 47 Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (378)
|.|+.| ++.++...+...|..++.++..+ .|.|. |.|+|+.. ...++.
T Consensus 19 i~l~g~-----I~~~~~~~~~~~L~~l~~~~~~~~i~i~IN------SpGG~v~~-------------------g~~i~~ 68 (182)
T PF00574_consen 19 IFLNGP-----IDEESANRLISQLLYLENEDKNKPINIYIN------SPGGDVDA-------------------GLAIYD 68 (182)
T ss_dssp EEEESS-----BSHHHHHHHHHHHHHHHHHTSSSEEEEEEE------ECEBCHHH-------------------HHHHHH
T ss_pred EEECCc-----cCHHHHHHHHHHHHHHhccCCCceEEEEEc------CCCCccHH-------------------HHHHHH
Confidence 445544 68899999998887774332222 23334 45555543 223455
Q ss_pred HHhcCCCcEEEEEcceeechhhcccccCCe--EEEeCceEEeccccccCccCCcchHHH----H-----------hhcch
Q 017069 125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY----L-----------SHLPG 187 (378)
Q Consensus 125 ~i~~~~kP~Iaav~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~----l-----------~r~~g 187 (378)
.|..++.|+++.+.|.|.+.|.-++++||. |++.+++.|.+.+...+......-... + ....|
T Consensus 69 ~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg 148 (182)
T PF00574_consen 69 AIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTG 148 (182)
T ss_dssp HHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 577789999999999999999999999999 899999999998886655331111100 1 01111
Q ss_pred --HH-HHHHHhcCCCCCHHHHHHcCccceecCC
Q 017069 188 --HL-GEFLALTGAKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 188 --~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~ 217 (378)
.. ...++-...-++|+||+++||||+|+.+
T Consensus 149 ~~~~~i~~~~~~~~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 149 LSKEEIEELMDRDTWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp S-HHHHHHHCSSTEEEEHHHHHHHTSSSEEESS
T ss_pred CcHHHHHHHHhCCccccHHHHHHcCCCCEeccC
Confidence 12 2444445566899999999999999864
No 113
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.31 E-value=2.4e-05 Score=74.69 Aligned_cols=139 Identities=13% Similarity=0.065 Sum_probs=93.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 017069 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (378)
Q Consensus 55 ~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (378)
.-.++++-.....+.++.++.. .+-+|-|--.+++++ |.+-.+ ......+.+....+....+|+|
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f-~lPIItlvDTpGA~~-G~~AE~-------------~G~~~aiar~l~~~a~~~VP~I 196 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKF-GLPILTFIDTPGAWA-GVKAEK-------------LGQGEAIAVNLREMFSFEVPII 196 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcCc-CHHHHH-------------HhHHHHHHHHHHHHHcCCCCEE
Confidence 4568899999999999888765 355555544333333 322111 1123345556666788999999
Q ss_pred EEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccce
Q 017069 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213 (378)
Q Consensus 135 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~ 213 (378)
++|-|.|.|||.-....||++++.+++.|+. +.|.++++.++...--.. |.+ .-.++|+++++.|+||+
T Consensus 197 sVViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~Il~~d~~~a~~aA~----~~~ita~dL~~~giiD~ 266 (322)
T CHL00198 197 CTIIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAILWKDSKKSLDAAE----ALKITSEDLKVLGIIDE 266 (322)
T ss_pred EEEeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHHHhcchhhHHHHHH----HcCCCHHHHHhCCCCeE
Confidence 9999999888865555699999999998763 234454444443322222 333 45899999999999999
Q ss_pred ecCCC
Q 017069 214 YSVSE 218 (378)
Q Consensus 214 vv~~~ 218 (378)
|+|..
T Consensus 267 ii~Ep 271 (322)
T CHL00198 267 IIPEP 271 (322)
T ss_pred eccCC
Confidence 99853
No 114
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.29 E-value=6.6e-06 Score=73.92 Aligned_cols=137 Identities=14% Similarity=0.086 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 58 l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
++..+...+...|..++..+..+.|+|.=. |.|+++..- ..++..|...+.||++.+
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~ag-------------------~aI~d~i~~~~~~V~t~v 88 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYID----SEGGDIDAG-------------------FAIFNMIRFVKPKVFTIG 88 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHHH-------------------HHHHHHHHhCCCCEEEEE
Confidence 677888899998888776333333333322 445554321 234455667889999999
Q ss_pred cceeechhhcccccCCe--EEEeCceEEeccccccCccCCcchHH----H-----------HhhcchH--H-HHHHHhcC
Q 017069 138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----Y-----------LSHLPGH--L-GEFLALTG 197 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~----~-----------l~r~~g~--~-a~~l~ltG 197 (378)
.|.|.+.|.-|+++||- |++.++++|.+-...-|+.....-.. . +...-|. . ...++-..
T Consensus 89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d 168 (197)
T PRK14512 89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD 168 (197)
T ss_pred EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence 99999999999999985 99999999876655433211111000 0 1111222 1 34445556
Q ss_pred CCCCHHHHHHcCccceecCC
Q 017069 198 AKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~vv~~ 217 (378)
..++|+||+++||||+|+++
T Consensus 169 ~~lta~EA~~yGliD~I~~~ 188 (197)
T PRK14512 169 FWLDSSSAVKYGLVFEVVET 188 (197)
T ss_pred cccCHHHHHHcCCccEeecC
Confidence 78999999999999999976
No 115
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=98.24 E-value=1.6e-05 Score=71.59 Aligned_cols=138 Identities=13% Similarity=0.064 Sum_probs=94.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017069 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaa 136 (378)
.+|.++..++...|-.++.++..+-+.|.=. |.|+|+.. ...++..+...+.||...
T Consensus 38 ~i~~~~a~~ii~~ll~L~~~~~~~~I~l~IN----SpGG~v~~-------------------g~aIyd~m~~~~~~V~Tv 94 (200)
T CHL00028 38 EVDDEIANQLIGLMVYLSIEDDTKDLYLFIN----SPGGSVIS-------------------GLAIYDTMQFVKPDVHTI 94 (200)
T ss_pred eecHHHHHHHHHHHHHHhccCCCCCEEEEEe----CCCcchhh-------------------HHHHHHHHHhcCCCEEEE
Confidence 3899999999999999875443343333222 44444332 123455567788999999
Q ss_pred EcceeechhhcccccCC--eEEEeCceEEeccccccCccCCcchHH-----------------HHhhcchH--H-HHHHH
Q 017069 137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF-----------------YLSHLPGH--L-GEFLA 194 (378)
Q Consensus 137 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~~-----------------~l~r~~g~--~-a~~l~ 194 (378)
+.|.|.+.|.-|++++| .|++.++++|.+.....|..-+- +.- .+...-|. . ..+++
T Consensus 95 ~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~-a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~ 173 (200)
T CHL00028 95 CLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQ-ASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDM 173 (200)
T ss_pred EEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 99999999999999998 69999999999887765522111 111 11111121 1 34555
Q ss_pred hcCCCCCHHHHHHcCccceecCCC
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSE 218 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~ 218 (378)
-...-++|+||+++||||+|+.+.
T Consensus 174 ~r~~~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 174 ERDVFMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred hcCccCCHHHHHHcCCCcEEeecC
Confidence 666779999999999999999764
No 116
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.24 E-value=4.7e-05 Score=72.67 Aligned_cols=139 Identities=12% Similarity=0.069 Sum_probs=91.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 017069 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (378)
Q Consensus 55 ~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (378)
.-+++++-.....+.++.++.- .+-+|-|.-.+++++ |.+..+ ......+.+.+..+....+|+|
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE~-------------~G~~~aia~~l~a~s~~~VP~I 193 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLGVPVI 193 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHHH-------------HHHHHHHHHHHHHHHcCCCCEE
Confidence 3568888999999888888764 355665544433332 322211 1223445566677788999999
Q ss_pred EEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccce
Q 017069 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213 (378)
Q Consensus 135 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~ 213 (378)
+.|-|.|.|||.-....||++++.+++.++. +.|.++++..+...--.. +.+. ..++|.++++.|+||.
T Consensus 194 sVViGeggsGGAla~~~aD~v~m~~~a~~sV------isPEg~a~Il~kd~~~a~~aae~----~~~ta~~l~~~G~iD~ 263 (316)
T TIGR00513 194 CTVIGEGGSGGALAIGVGDKVNMLEYSTYSV------ISPEGCAAILWKDASKAPKAAEA----MKITAPDLKELGLIDS 263 (316)
T ss_pred EEEecccccHHHhhhccCCEEEEecCceEEe------cCHHHHHHHhccchhhHHHHHHH----ccCCHHHHHHCCCCeE
Confidence 9999999777775555699999999987763 234444444333321112 3332 5678999999999999
Q ss_pred ecCCC
Q 017069 214 YSVSE 218 (378)
Q Consensus 214 vv~~~ 218 (378)
|+|..
T Consensus 264 II~ep 268 (316)
T TIGR00513 264 IIPEP 268 (316)
T ss_pred eccCC
Confidence 99853
No 117
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.23 E-value=4.4e-05 Score=74.78 Aligned_cols=138 Identities=14% Similarity=0.074 Sum_probs=92.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 017069 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (378)
Q Consensus 56 Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia 135 (378)
.+++++-.....+.++.++.. .+-+|-|.-.++++ .|.+..+ ......+.+....+....+|+|+
T Consensus 200 G~~~peGyRKAlR~mklAekf-~lPIVtLVDTpGA~-pG~~AEe-------------~Gqa~aIAr~l~ams~l~VPiIS 264 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKF-GFPILTFVDTPGAY-AGIKAEE-------------LGQGEAIAFNLREMFGLRVPIIA 264 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcC-CCHHHHH-------------HhHHHHHHHHHHHHhcCCCCEEE
Confidence 468899999999998888765 35555554433333 3322211 12234455667778899999999
Q ss_pred EEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCcccee
Q 017069 136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHY 214 (378)
Q Consensus 136 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~v 214 (378)
.|-|.+.+||.-...+||+++|.+++.++. +.|.++++.++....-.. +.+ .-.++|+++++.|+||+|
T Consensus 265 VViGeGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~I 334 (431)
T PLN03230 265 TVIGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEI 334 (431)
T ss_pred EEeCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEe
Confidence 999999666655455789999999987653 234455555444332222 333 338999999999999999
Q ss_pred cCCC
Q 017069 215 SVSE 218 (378)
Q Consensus 215 v~~~ 218 (378)
++..
T Consensus 335 I~Ep 338 (431)
T PLN03230 335 VPEP 338 (431)
T ss_pred ccCC
Confidence 9853
No 118
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=98.22 E-value=2.3e-05 Score=70.11 Aligned_cols=136 Identities=15% Similarity=0.041 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 58 l~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
++..+..++...|..++.++..+-|+|.=. |.|+|+..- ..++..+..++.|+...+
T Consensus 35 I~~~~~~~ii~~L~~l~~~~~~~~i~l~In----SpGG~v~~g-------------------~~I~d~l~~~~~~v~t~~ 91 (191)
T TIGR00493 35 VNDSVANLIVAQLLFLEAEDPEKDIYLYIN----SPGGSITAG-------------------LAIYDTMQFIKPDVSTIC 91 (191)
T ss_pred EChHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence 677888888888888886554444443332 445554321 123344556667787778
Q ss_pred cceeechhhcccccCC--eEEEeCceEEeccccccCccCCcchH---------------HHHhhcchH--H-HHHHHhcC
Q 017069 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH--L-GEFLALTG 197 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~r~~g~--~-a~~l~ltG 197 (378)
.|.|.+.|.-+++++| .|++.++++|.+.+..-|......-. ..+.+.-|. . ...++-.+
T Consensus 92 ~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~~~ 171 (191)
T TIGR00493 92 IGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTERD 171 (191)
T ss_pred EEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhCC
Confidence 8999999988888665 69999999999877654432111111 012222232 2 45566678
Q ss_pred CCCCHHHHHHcCccceecC
Q 017069 198 AKLNGAEMMACGLATHYSV 216 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~vv~ 216 (378)
..++|+||+++||||+|+.
T Consensus 172 ~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 172 FFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred ccCcHHHHHHcCCccEEec
Confidence 8899999999999999975
No 119
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.21 E-value=3.7e-05 Score=79.83 Aligned_cols=138 Identities=12% Similarity=0.033 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 017069 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (378)
Q Consensus 55 ~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (378)
.-++++.-+....+.++.++.. .+-+|-|--.++++. |.+... ......+.+.+..+....+|+|
T Consensus 220 fG~~~peGyRKAlRlmkLAekf-gLPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~I 284 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHH-GFPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIV 284 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEE
Confidence 4467788888888888888765 355554444333332 322221 1223445566777889999999
Q ss_pred EEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHH-HHHHHhcCCCCCHHHHHHcCccce
Q 017069 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213 (378)
Q Consensus 135 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~ 213 (378)
++|-|.|.|||.-....||+++|.+++.++. +.|.++++..+...--.. |. ..-.++|++.+++|+||.
T Consensus 285 SVViGeggSGGAlA~g~aD~VlMle~A~~sV------isPEgaAsILwkd~~~A~eAA----e~lkiTa~dL~~lGiiD~ 354 (762)
T PLN03229 285 SIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKAAPKAA----EKLRITAQELCRLQIADG 354 (762)
T ss_pred EEEeCCcchHHHHHhhcCCEEEEecCCeEEe------cCHHHHHHHHhcCcccHHHHH----HHcCCCHHHHHhCCCCee
Confidence 9999999888877777799999999887553 234444444333322222 33 345899999999999999
Q ss_pred ecCC
Q 017069 214 YSVS 217 (378)
Q Consensus 214 vv~~ 217 (378)
|+|.
T Consensus 355 IIpE 358 (762)
T PLN03229 355 IIPE 358 (762)
T ss_pred eccC
Confidence 9985
No 120
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.17 E-value=4.7e-05 Score=72.78 Aligned_cols=140 Identities=12% Similarity=0.070 Sum_probs=93.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 017069 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (378)
Q Consensus 55 ~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (378)
.-+++++-.....+.++.++.- .+-+|-|.-.++++. |.+-.+ ......+.+.+..+....+|+|
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE~-------------~G~~~aia~~l~~~a~~~VP~I 193 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLKVPII 193 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHHh-------------ccHHHHHHHHHHHHhCCCCCEE
Confidence 4567888898888888888764 456665554444333 332211 1123445667777889999999
Q ss_pred EEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCCCCHHHHHHcCcccee
Q 017069 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (378)
Q Consensus 135 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~Glv~~v 214 (378)
+.|-|.|.|||.-....||+++|.+++.++ +.++-|++..|.+--.. +.+.. ....+++.++++.|+||+|
T Consensus 194 sVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~aa-e~~~ita~~l~~~g~iD~I 264 (319)
T PRK05724 194 CTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEAA-EAMKITAQDLKELGIIDEI 264 (319)
T ss_pred EEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHHH-HHcCCCHHHHHHCCCceEe
Confidence 999999988877555569999999888765 33334444444433222 22221 1456899999999999999
Q ss_pred cCCC
Q 017069 215 SVSE 218 (378)
Q Consensus 215 v~~~ 218 (378)
++..
T Consensus 265 I~Ep 268 (319)
T PRK05724 265 IPEP 268 (319)
T ss_pred ccCC
Confidence 9853
No 121
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=98.16 E-value=0.00028 Score=65.15 Aligned_cols=156 Identities=12% Similarity=0.018 Sum_probs=94.7
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-hcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHH
Q 017069 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAW-ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (378)
Q Consensus 41 ~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~-~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (378)
+|.-..|.=|.|.. .++.+-...+...+... +.+...-+|.|.-.. .|-.|..- +.......+
T Consensus 30 ~G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDtp-G~~~g~~a-------------E~~G~~~a~ 93 (238)
T TIGR03134 30 AGGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDTP-SQAYGRRE-------------ELLGINQAL 93 (238)
T ss_pred CCEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeCC-CCCCCHHH-------------HHHHHHHHH
Confidence 34434444445542 78888888888888885 455667766665542 23333221 222223333
Q ss_pred HHHHHHHh---cCCCcEEEEEcceeechhh-cccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHh
Q 017069 120 YSFIYLLG---THLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 195 (378)
Q Consensus 120 ~~l~~~i~---~~~kP~Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~l 195 (378)
.++.+.+. ..+.|+|+.|-|.++|||+ .+.+.+|.++|.+++.+ +..+.-+++..+.+-... +.++.-
T Consensus 94 A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~i-------~vm~~e~aa~I~~~~~~~-~~e~a~ 165 (238)
T TIGR03134 94 AHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMV-------HVMDLESMARVTKRSVEE-LEALAK 165 (238)
T ss_pred HHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcEE-------EecCHHHHHHHHccCHhH-HHHHHH
Confidence 44444444 5569999999999998876 55556888888766654 555555555555544432 222221
Q ss_pred c--CCCCCHHHHHHcCccceecCCCCh
Q 017069 196 T--GAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 196 t--G~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
+ -...+...+.+.|+||+|+++.+-
T Consensus 166 ~~~~~a~~~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 166 SSPVFAPGIENFVKLGGVHALLDVADA 192 (238)
T ss_pred hhhhhccCHHHHHhCCCccEEeCCCCc
Confidence 1 124577789999999999997664
No 122
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=98.03 E-value=0.00016 Score=67.84 Aligned_cols=156 Identities=12% Similarity=0.077 Sum_probs=97.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcC----CCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWEND----PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d----~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (378)
|+++-.+..-..-++....-..+..+++.+.+| ..+.+|.|.-.| |..+.+-. .....+. .+
T Consensus 61 v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSg-----GaRlqEg~--------~~L~~~a-~i 126 (274)
T TIGR03133 61 VVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDTG-----GVRLQEAN--------AGLIAIA-EI 126 (274)
T ss_pred EEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcCC-----CcChhhhH--------HHHHHHH-HH
Confidence 566666655566788888889999999988762 123466665533 33343211 0111111 11
Q ss_pred HHHHHHHhcCCCcEEEEEcce--eechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchH--H-HHHHH
Q 017069 120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 194 (378)
Q Consensus 120 ~~l~~~i~~~~kP~Iaav~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~--~-a~~l~ 194 (378)
......+... +|+|+.+.|+ |+||+..++.+||++|+++++++++. +...+....|. . ..+-.
T Consensus 127 ~~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~ 194 (274)
T TIGR03133 127 MRAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 194 (274)
T ss_pred HHHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhc
Confidence 1122223334 9999999999 89999999999999999998877763 22223333332 1 33444
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHH
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 226 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~ 226 (378)
|..+.+.+......|++|.+++++. +++..+
T Consensus 195 l~~~~lGG~~~~~sG~~D~~v~dd~-~a~~~~ 225 (274)
T TIGR03133 195 LVWRTTGGKHRFLSGDADVLVEDDV-DAFRAA 225 (274)
T ss_pred ccccccchHhHhhcccceEEeCCHH-HHHHHH
Confidence 4455567777888999999999754 334443
No 123
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.00 E-value=0.00011 Score=66.97 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=90.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCC---CceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcE
Q 017069 57 ALNTNMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 133 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~---~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~ 133 (378)
.+|..+..++...|..++..+ .+.+ .|-+. |+++.. ...++..+...+-||
T Consensus 62 ~Idd~~a~~i~aqLl~L~~~~~~~~I~l-yINSp------GGsv~a-------------------GlaIyd~m~~~~~~V 115 (221)
T PRK14514 62 QIDDYTANTIQAQLLYLDSVDPGKDISI-YINSP------GGSVYA-------------------GLGIYDTMQFISSDV 115 (221)
T ss_pred EEcHHHHHHHHHHHHHHhccCCCCCEEE-EEECC------Ccchhh-------------------HHHHHHHHHhcCCCE
Confidence 478888888888777776432 3333 33433 443321 112445566788899
Q ss_pred EEEEcceeechhhcccccCCe--EEEeCceEEeccccccCccCCcchHHH---------------HhhcchH--H-HHHH
Q 017069 134 VAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY---------------LSHLPGH--L-GEFL 193 (378)
Q Consensus 134 Iaav~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~---------------l~r~~g~--~-a~~l 193 (378)
...+.|.|.+.|.-|++++|. |++.++++|.+-...-|......-... +.+..|. . ..+.
T Consensus 116 ~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~ 195 (221)
T PRK14514 116 ATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWAD 195 (221)
T ss_pred EEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 999999999999999999996 999999999987765443221110100 1112232 1 3445
Q ss_pred HhcCCCCCHHHHHHcCccceecCC
Q 017069 194 ALTGAKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 194 ~ltG~~~~a~eA~~~Glv~~vv~~ 217 (378)
+-....++|+||+++||||+|+..
T Consensus 196 ~~rd~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 196 SDRDYWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred hhcCccCCHHHHHHcCCccEEeec
Confidence 566778999999999999999864
No 124
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.99 E-value=0.00011 Score=65.80 Aligned_cols=140 Identities=12% Similarity=0.032 Sum_probs=92.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017069 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaa 136 (378)
.++.++..++...|..++.++..+-+.+.=. |.|+|+..- ..++..+...+-||...
T Consensus 33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~aIyd~m~~~~~~V~t~ 89 (196)
T PRK12551 33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYIN----SPGGSVYDG-------------------LGIFDTMQHVKPDVHTV 89 (196)
T ss_pred eecHHHHHHHHHHHHHhhccCCCCCEEEEEe----CCCcchhhH-------------------HHHHHHHHhcCCCEEEE
Confidence 4899999999999999875443333333222 444554321 23445566788899999
Q ss_pred EcceeechhhcccccCCe--EEEeCceEEeccccccCccCCcchHH----H-----------HhhcchH--H-HHHHHhc
Q 017069 137 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----Y-----------LSHLPGH--L-GEFLALT 196 (378)
Q Consensus 137 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~----~-----------l~r~~g~--~-a~~l~lt 196 (378)
+.|.|.+.|.-|++++|. |++.++++|.+....-|..-...-.. . +.+..|. . ..+++-.
T Consensus 90 ~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~r 169 (196)
T PRK12551 90 CVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDR 169 (196)
T ss_pred EEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhc
Confidence 999999999999999885 88999999988776533211111110 0 1111222 1 3444555
Q ss_pred CCCCCHHHHHHcCccceecCCCC
Q 017069 197 GAKLNGAEMMACGLATHYSVSEK 219 (378)
Q Consensus 197 G~~~~a~eA~~~Glv~~vv~~~~ 219 (378)
...++|+||+++||||+|++...
T Consensus 170 d~~msa~EA~eyGliD~I~~~~~ 192 (196)
T PRK12551 170 DFFMSPSEAVEYGLIDLVIDKRP 192 (196)
T ss_pred CcCCCHHHHHHcCCCcEEeccCC
Confidence 66799999999999999998643
No 125
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.97 E-value=9.6e-05 Score=66.42 Aligned_cols=137 Identities=13% Similarity=0.129 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCce--EEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 017069 57 ALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (378)
.++.++...+...|-.++.++.-+ -|.|- |.|+|+..- ..++..|...+-||.
T Consensus 35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~IN------SpGG~v~~G-------------------laIyd~m~~~~~~V~ 89 (201)
T PRK14513 35 PIESQMANTIVAQLLLLDSQNPEQEIQMYIN------CPGGEVYAG-------------------LAIYDTMRYIKAPVS 89 (201)
T ss_pred EEcHHHHHHHHHHHHHhhccCCCCCEEEEEE------CCCCchhhH-------------------HHHHHHHHhcCCCEE
Confidence 478899999988888887543222 22333 444554321 234555677888999
Q ss_pred EEEcceeechhhcccccCCe--EEEeCceEEeccccccCccCCcchHHH-----------------HhhcchH--H-HHH
Q 017069 135 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY-----------------LSHLPGH--L-GEF 192 (378)
Q Consensus 135 aav~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~-----------------l~r~~g~--~-a~~ 192 (378)
..+.|.|.+.|.-|++++|- |++.+++++.+.....|+. +..... +.+..|. . -..
T Consensus 90 Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~ 167 (201)
T PRK14513 90 TICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLR 167 (201)
T ss_pred EEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99999999999999999995 9999999999877765541 111111 1112222 1 244
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 193 LALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 193 l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
++-....++|+||+++||||+|+++...
T Consensus 168 ~~~rd~~msa~EA~eyGliD~I~~~~~~ 195 (201)
T PRK14513 168 DMERDYFMSPEEAKAYGLIDSVIEPTRV 195 (201)
T ss_pred HhccCcccCHHHHHHcCCCcEEeccCCC
Confidence 4555667999999999999999987543
No 126
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.96 E-value=6.5e-05 Score=72.55 Aligned_cols=153 Identities=16% Similarity=0.176 Sum_probs=96.3
Q ss_pred CEEEEEEcCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHH
Q 017069 43 NSRMAILNRPSA--LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (378)
Q Consensus 43 ~v~~Itln~p~~--~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (378)
.|++|.++.+=- .+.+..-..+.+.+.|+.+..|+.+++|+|.=. |-|+....- ..+.
T Consensus 60 ~Iavi~~~G~I~~~~~~~~~~~~~~~~~~l~~~~~~~~vk~vvL~in----SPGG~v~as----------------~~i~ 119 (317)
T COG0616 60 VIAVIHVEGAIVAGGGPLRFIGGDDIEEILRAARADPSVKAVVLRIN----SPGGSVVAS----------------ELIA 119 (317)
T ss_pred EEEEEEeeeeeecCCCccccccHHHHHHHHHHHhcCCCCceEEEEEE----CcCCchhHH----------------HHHH
Confidence 466666654310 111112235566677888889999999988765 555544321 1223
Q ss_pred HHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhh----------------
Q 017069 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH---------------- 184 (378)
Q Consensus 121 ~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r---------------- 184 (378)
+.++++..-. ||++.|++.|.-||.-++++||.+||++.+..|---+..+. |.. ...+.+
T Consensus 120 ~~l~~l~~~~-PV~v~v~~~AASGGY~IA~aAd~I~a~p~si~GSIGVi~~~-~~~--~~l~~k~Gv~~~~~~ag~~k~~ 195 (317)
T COG0616 120 RALKRLRAKK-PVVVSVGGYAASGGYYIALAADKIVADPSSITGSIGVISGA-PNF--EELLEKLGVEKEVITAGEYKDI 195 (317)
T ss_pred HHHHHHhhcC-CEEEEECCeecchhhhhhccCCEEEecCCceeeeceeEEec-CCH--HHHHHhcCCceeeeeccccccc
Confidence 3334444444 99999999999999999999999999998876643333321 111 111110
Q ss_pred -----------------cc----------------hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCC
Q 017069 185 -----------------LP----------------GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEK 219 (378)
Q Consensus 185 -----------------~~----------------g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~ 219 (378)
.+ ... ...-+.+|+-+++++|++.||||++...++
T Consensus 196 ~~~~~~~t~e~~~~~q~~~~e~y~~F~~~V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~~~ 264 (317)
T COG0616 196 LSPFRPLTEEEREILQKEIDETYDEFVDKVAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGLDD 264 (317)
T ss_pred cCcccCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCHHH
Confidence 00 011 233567899999999999999999886543
No 127
>PRK11778 putative inner membrane peptidase; Provisional
Probab=97.93 E-value=6.6e-05 Score=72.30 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=93.8
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHH
Q 017069 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (378)
Q Consensus 41 ~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (378)
.+.|++|.++.+=..+ -...+-+++...++.+..+ ..|||+-. |.|+.+..... ..
T Consensus 89 ~~~v~VI~~~G~I~~~-~~~~l~e~i~a~l~~A~~~---~aVvLrid----SpGG~v~~s~~----------------a~ 144 (330)
T PRK11778 89 KPRLFVLDFKGDIDAS-EVESLREEITAILAVAKPG---DEVLLRLE----SPGGVVHGYGL----------------AA 144 (330)
T ss_pred CCeEEEEEEEEEECCC-cchhhHHHHHHHHHhccCC---CeEEEEEe----CCCCchhHHHH----------------HH
Confidence 4679999988653211 1223445555555554433 46777665 44444432110 00
Q ss_pred HHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccc------------cCccCC---------cc--
Q 017069 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AG-- 177 (378)
Q Consensus 121 ~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl~p~---------~g-- 177 (378)
....++....||+|+.+.+.|.-||+-++++||-+++.+.+.++.-.+- +|+-+. .+
T Consensus 145 ~~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~p 224 (330)
T PRK11778 145 SQLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTL 224 (330)
T ss_pred HHHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCC
Confidence 1123345678999999999999999999999999999998776654331 222100 00
Q ss_pred -------hHHHHhhcc---------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 178 -------ASFYLSHLP---------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 178 -------~~~~l~r~~---------------g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
.-..+...+ +..-.+-+.+|+.+++++|++.||||++...+++
T Consensus 225 f~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 225 FGENTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY 289 (330)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence 000111111 1111223568999999999999999999876554
No 128
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.87 E-value=0.00055 Score=65.09 Aligned_cols=150 Identities=14% Similarity=0.117 Sum_probs=91.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC----CceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~----~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (378)
|+++-.+..-..-++.......+..+++.+.++. -+.+|+|.-.| |+.+.+-. .....+. .+
T Consensus 70 v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-----GaRlqEg~--------~~L~~~a-~i 135 (301)
T PRK07189 70 VVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-----GVRLQEAN--------AGLAAIA-EI 135 (301)
T ss_pred EEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-----CcCccchH--------HHHHHHH-HH
Confidence 6666666665778899999999999999987664 15566665543 33333211 0111111 11
Q ss_pred HHHHHHHhcCCCcEEEEEcce--eechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchH--H-HHHHH
Q 017069 120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 194 (378)
Q Consensus 120 ~~l~~~i~~~~kP~Iaav~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~--~-a~~l~ 194 (378)
...+..+... +|+|+.+.|+ |+||+...+.+||++|+++++.+++. +...+....|. . ..+-.
T Consensus 136 ~~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~ 203 (301)
T PRK07189 136 MRAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 203 (301)
T ss_pred HHHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhc
Confidence 2222223344 9999999999 99999999999999999998877653 11222222221 1 22222
Q ss_pred hcCCCCCHHHHHHcCccceecCCCC
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEK 219 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~ 219 (378)
+..+.+.+......|.+|.+++++.
T Consensus 204 ~vw~~lGG~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 204 LVWRTTGGKHRYLSGLADALVDDDV 228 (301)
T ss_pred ccccccCcceeeecccceEEeCCHH
Confidence 2222233334456899999998764
No 129
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.73 E-value=0.00097 Score=63.43 Aligned_cols=152 Identities=13% Similarity=0.129 Sum_probs=95.4
Q ss_pred eeCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHH
Q 017069 40 GKAN-SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (378)
Q Consensus 40 ~~~~-v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (378)
.+|. |+++-.|..-..-+++....+.+.++++.+... .+-+|.|.-.| |+.+.+ +. ..+.++ ..
T Consensus 118 I~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-----GarmqE-------gi-~sL~~~-ak 182 (292)
T PRK05654 118 IEGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-----GARMQE-------GL-LSLMQM-AK 182 (292)
T ss_pred ECCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhh-------hh-hHHHhH-HH
Confidence 3444 444444433367889999999999999998766 46778777544 332221 11 111111 12
Q ss_pred HHHHHHHHhcCCCcEEEEEcceeechhh-cccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcC
Q 017069 119 LYSFIYLLGTHLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG 197 (378)
Q Consensus 119 ~~~l~~~i~~~~kP~Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG 197 (378)
......++....+|.|+.+.|+|.||+. .+++.+|++||.+++.+++.-.+ .+...++. ++ .-
T Consensus 183 ~~~a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e---~l--pe 246 (292)
T PRK05654 183 TSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVRE---KL--PE 246 (292)
T ss_pred HHHHHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhh---hh--hh
Confidence 2233344556789999999999999965 45777999999998887763221 11111211 11 11
Q ss_pred CCCCHHHHHHcCccceecCCCChhH
Q 017069 198 AKLNGAEMMACGLATHYSVSEKLPL 222 (378)
Q Consensus 198 ~~~~a~eA~~~Glv~~vv~~~~l~~ 222 (378)
+.-+++-+.+.|+||.|+++.++..
T Consensus 247 ~~~~ae~~~~~G~vD~Vv~~~e~r~ 271 (292)
T PRK05654 247 GFQRAEFLLEHGAIDMIVHRRELRD 271 (292)
T ss_pred hhcCHHHHHhCCCCcEEECHHHHHH
Confidence 1225667789999999999988754
No 130
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.70 E-value=0.00094 Score=63.26 Aligned_cols=151 Identities=12% Similarity=0.122 Sum_probs=96.0
Q ss_pred eCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHH
Q 017069 41 KAN-SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (378)
Q Consensus 41 ~~~-v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (378)
+|. |+++-.|..-..-+++....+.+.++++.+.+. .+-+|.|...|++ -+.+ +. ..+.++ ...
T Consensus 118 ~G~~V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGa-----RmqE-------g~-~sL~~~-ak~ 182 (285)
T TIGR00515 118 YGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGA-----RMQE-------AL-LSLMQM-AKT 182 (285)
T ss_pred CCEEEEEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----cccc-------ch-hHHHhH-HHH
Confidence 443 555555544467789999999999999998765 4677877765443 2221 11 111111 122
Q ss_pred HHHHHHHhcCCCcEEEEEcceeechhh-cccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCC
Q 017069 120 YSFIYLLGTHLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA 198 (378)
Q Consensus 120 ~~l~~~i~~~~kP~Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~ 198 (378)
.....++.....|.|+++.|+|.||+. .+++.+|++||.++|.+++.-.+ .+...+|.. +.-+
T Consensus 183 ~~~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-----lpe~ 246 (285)
T TIGR00515 183 SAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-----LPEG 246 (285)
T ss_pred HHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-----cchh
Confidence 223344566789999999999999965 45679999999999888774322 122222211 1111
Q ss_pred CCCHHHHHHcCccceecCCCChhH
Q 017069 199 KLNGAEMMACGLATHYSVSEKLPL 222 (378)
Q Consensus 199 ~~~a~eA~~~Glv~~vv~~~~l~~ 222 (378)
--+|+-+.+.|+||.|+++.++..
T Consensus 247 ~q~ae~~~~~G~vD~iv~~~~~r~ 270 (285)
T TIGR00515 247 FQTSEFLLEHGAIDMIVHRPEMKK 270 (285)
T ss_pred cCCHHHHHhCCCCcEEECcHHHHH
Confidence 225566778999999999987743
No 131
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=97.60 E-value=0.0013 Score=64.98 Aligned_cols=148 Identities=9% Similarity=0.138 Sum_probs=105.7
Q ss_pred eeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEec-CCCCcccCCChhhHHHhhccCChHHHHHHHHH
Q 017069 40 GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (378)
Q Consensus 40 ~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g-~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (378)
.++.|.+|.++ +.+++.+.+.+.+.++.++++.. .+|||.= .++ ...+.
T Consensus 24 ~~~~v~vi~i~-----g~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ldTPG------------------------Gl~~s 73 (436)
T COG1030 24 AEKKVYVIEID-----GAIDPASADYLQRALQSAEEENA-AAVVLELDTPG------------------------GLLDS 73 (436)
T ss_pred cCCeEEEEEec-----CccCHHHHHHHHHHHHHHHhCCC-cEEEEEecCCC------------------------chHHH
Confidence 34568888886 45899999999999999997763 2344332 111 11334
Q ss_pred HHHHHHHHhcCCCcEEEEE---cceeechhhcccccCCeEEEeCceEEeccccccCc---cCCcc-hHHHHh------hc
Q 017069 119 LYSFIYLLGTHLKPHVAIL---NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF---HPDAG-ASFYLS------HL 185 (378)
Q Consensus 119 ~~~l~~~i~~~~kP~Iaav---~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl---~p~~g-~~~~l~------r~ 185 (378)
+.++.+.+.+.+.|++..| .+.|..+|.-++++||+..|.+.+.++-...-.+- .+... ...++. +.
T Consensus 74 m~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~ 153 (436)
T COG1030 74 MRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEE 153 (436)
T ss_pred HHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHH
Confidence 6678888999999988887 34699999999999999999999999865543222 11111 122222 22
Q ss_pred chH--H-HHHHHhcCCCCCHHHHHHcCccceecCC
Q 017069 186 PGH--L-GEFLALTGAKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 186 ~g~--~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~ 217 (378)
-|. . |.+++-....++++||++.|++|-+..+
T Consensus 154 ~gRN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 154 RGRNPTWAERFVTENLSLTAEEALRQGVIDLIARD 188 (436)
T ss_pred cCCChHHHHHHhhhccCCChhHHHhcCccccccCC
Confidence 232 3 7888999999999999999999988764
No 132
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=97.59 E-value=0.0011 Score=62.85 Aligned_cols=148 Identities=14% Similarity=0.174 Sum_probs=92.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|+++-+|..-..-++....-+.+.++++.+.+.. +-+|++...| |+-+.+ +. ..+.++.+ ....+
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SG-----GARmQE-------g~-~sL~qmak-~saa~ 199 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNES-LPLIIVCASG-----GARMQE-------GS-LSLMQMAK-ISSAL 199 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCC-----Cccccc-------cc-hhhhhhHH-HHHHH
Confidence 6666666655678899999999999999987654 6677777644 333322 11 11111111 11111
Q ss_pred HH-HhcCCCcEEEEEcceeechhhcc-cccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCCCC
Q 017069 124 YL-LGTHLKPHVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN 201 (378)
Q Consensus 124 ~~-i~~~~kP~Iaav~G~a~GgG~~l-al~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~ 201 (378)
.. ...-..|.|+++.|+|.||+... ++.||++|+.+++.+++.-.+ .+...+|.. +.-+-=+
T Consensus 200 ~~~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~t~ge~-----lpe~fq~ 263 (296)
T CHL00174 200 YDYQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQTLNKT-----VPEGSQA 263 (296)
T ss_pred HHHHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHHhcCCc-----CCccccc
Confidence 22 22467999999999999998755 667999999888877654221 111111110 0111124
Q ss_pred HHHHHHcCccceecCCCChhH
Q 017069 202 GAEMMACGLATHYSVSEKLPL 222 (378)
Q Consensus 202 a~eA~~~Glv~~vv~~~~l~~ 222 (378)
|+-.++.|+||.+|+..++..
T Consensus 264 ae~l~~~G~vD~iV~r~~lr~ 284 (296)
T CHL00174 264 AEYLFDKGLFDLIVPRNLLKG 284 (296)
T ss_pred HHHHHhCcCceEEEcHHHHHH
Confidence 666789999999999877643
No 133
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.25 E-value=0.0024 Score=59.34 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=82.3
Q ss_pred EEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHH
Q 017069 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF 116 (378)
Q Consensus 37 ~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~ 116 (378)
.+++++.+..+.+ |- .+.++.+...++.++++....+..+ .++|. +-|+++..
T Consensus 54 ~Ihrqe~~~~~gi--Pi-~~~I~i~dse~v~raI~~~~~~~~I-dLii~------TpGG~v~A----------------- 106 (285)
T PF01972_consen 54 LIHRQERVSFLGI--PI-YRYIDIDDSEFVLRAIREAPKDKPI-DLIIH------TPGGLVDA----------------- 106 (285)
T ss_pred EEEeccccceecc--cc-ceeEcHhhHHHHHHHHHhcCCCCce-EEEEE------CCCCcHHH-----------------
Confidence 3444444444433 32 4678889999999999888776554 34444 33444432
Q ss_pred HHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCc
Q 017069 117 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA 176 (378)
Q Consensus 117 ~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~ 176 (378)
..++...+.+++.|+++.|+..|+.+|.-++++||-+++.+++.+|--+.++|-.|..
T Consensus 107 --A~~I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~ 164 (285)
T PF01972_consen 107 --AEQIARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAA 164 (285)
T ss_pred --HHHHHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChH
Confidence 1234455677899999999999999999999999999999999999999999987743
No 134
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.25 E-value=0.00027 Score=61.00 Aligned_cols=94 Identities=16% Similarity=0.101 Sum_probs=59.2
Q ss_pred hcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccc------------cCc---------cCCcc--------
Q 017069 127 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGF---------HPDAG-------- 177 (378)
Q Consensus 127 ~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~Gl---------~p~~g-------- 177 (378)
....|||||.++|.|..+|+-++.+||-+++.+.+.++..-+. +|+ .-..+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 4678999999999999999999999999999998777654332 222 11111
Q ss_pred -hHHHHhhcc-----------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 178 -ASFYLSHLP-----------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 178 -~~~~l~r~~-----------------g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
.-..+.+.+ .....+-+..|..+++++|++.||||++...+++
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~ 143 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEA 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHH
Confidence 111111111 1111222578999999999999999999865544
No 135
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=97.24 E-value=0.01 Score=61.12 Aligned_cols=153 Identities=17% Similarity=0.139 Sum_probs=97.0
Q ss_pred EEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 017069 48 ILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 126 (378)
Q Consensus 48 tln~p~-~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 126 (378)
.-|+|. ..-+++........+.++.++.. .+-+|.|.-.++ |..|.+- +....+....+++..+
T Consensus 320 vAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~-------------E~~g~~~~~a~~~~a~ 384 (512)
T TIGR01117 320 IANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQ-------------EYGGIIRHGAKVLYAY 384 (512)
T ss_pred EEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHH-------------HHHHHHHHHHHHHHHH
Confidence 334443 45569999999999999988764 566776665443 5544331 1223344555677788
Q ss_pred hcCCCcEEEEEcceeechhhcccc----cCCeEEEeCceEEeccccccCccCCcchHHHHh-hcch----HH-HHH--H-
Q 017069 127 GTHLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPG----HL-GEF--L- 193 (378)
Q Consensus 127 ~~~~kP~Iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-r~~g----~~-a~~--l- 193 (378)
....+|.|+.|-|.+.|||+.-.. .+|+++|.+++.++ +.++-+++..+. +.+. .. +.. +
T Consensus 385 ~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~ 457 (512)
T TIGR01117 385 SEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAATRKQKIA 457 (512)
T ss_pred HhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHHHHHHHH
Confidence 889999999999999888654332 38998888887665 333333333332 2111 01 111 1
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhH
Q 017069 194 ALTGAKLNGAEMMACGLATHYSVSEKLPL 222 (378)
Q Consensus 194 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~ 222 (378)
-..-+..++..+.+.|+||.|+++.+...
T Consensus 458 ~~~~~~~~~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 458 EYREEFANPYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHHHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence 11223457889999999999999987643
No 136
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=97.22 E-value=0.0055 Score=62.90 Aligned_cols=139 Identities=14% Similarity=0.177 Sum_probs=92.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCC--ChhhHHHhhccCChHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTLYS 121 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~--Dl~~~~~~~~~~~~~~~~~~~~~~~~ 121 (378)
|.++-.+..-...+++......+..+++.+.++. +-+|.|.- |+|. ++.+-.. ....+-. +..
T Consensus 59 v~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~~-~P~v~l~d-----sgGa~~r~~eg~~--------~l~~~g~-i~~ 123 (493)
T PF01039_consen 59 VVVIAQDFTVLGGSVGEVHGEKIARAIELALENG-LPLVYLVD-----SGGAFLRMQEGVE--------SLMGMGR-IFR 123 (493)
T ss_dssp EEEEEEETTSGGGTBSHHHHHHHHHHHHHHHHHT-EEEEEEEE-----ESSBCGGGGGHHH--------HHHHHHH-HHH
T ss_pred EEEEEeccceecCCCCcccceeeehHHHHHHHcC-CCcEEecc-----ccccccccchhhh--------hhhhhHH-HHH
Confidence 5555555555678899999999999999988764 55565554 4444 4443221 1112222 222
Q ss_pred HHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc-eEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCCC
Q 017069 122 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL 200 (378)
Q Consensus 122 l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~ 200 (378)
-...+.. ..|+|+++.|+|.|||..++..||++|+.++ +.+.+.-. ..+. ..+|+.+
T Consensus 124 ~~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~GP-----------~vv~----------~~~Ge~~ 181 (493)
T PF01039_consen 124 AIARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLAGP-----------RVVE----------SATGEEV 181 (493)
T ss_dssp HHHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESSTH-----------HHHH----------HHHSSCT
T ss_pred HHHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEeccc-----------cccc----------cccCccc
Confidence 2334455 9999999999999999999999999999997 77664311 1111 2457888
Q ss_pred CHHHH-------HHcCccceecCCCC
Q 017069 201 NGAEM-------MACGLATHYSVSEK 219 (378)
Q Consensus 201 ~a~eA-------~~~Glv~~vv~~~~ 219 (378)
+.++. ..-|.+|.++++++
T Consensus 182 ~~~~lgG~~~h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 182 DSEELGGADVHAAKSGVVDYVVDDEE 207 (493)
T ss_dssp SHHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred cchhhhhhhhhcccCCCceEEEechH
Confidence 87764 46899999998754
No 137
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.21 E-value=0.003 Score=66.07 Aligned_cols=85 Identities=13% Similarity=-0.062 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcce
Q 017069 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (378)
Q Consensus 61 ~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~ 140 (378)
-.+.++.++|+.+.+|+.|++|||.-.+ +.|+++..+ ..+.+.+..+....|||||..+++
T Consensus 76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~----------------~ei~~ai~~fk~sgKpVvA~~~~~ 136 (584)
T TIGR00705 76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHL----------------VEIGSALSEFKDSGKPVYAYGTNY 136 (584)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHH----------------HHHHHHHHHHHhcCCeEEEEEccc
Confidence 3577999999999999999999999763 224433321 112223334455789999988877
Q ss_pred eechhhcccccCCeEEEeCceEEec
Q 017069 141 TMGGGAGVSIPGTFRVACGKTVFAT 165 (378)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~ 165 (378)
+ -+|+-++.+||-+++.+.+.+++
T Consensus 137 ~-s~~YylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 137 S-QGQYYLASFADEIILNPMGSVDL 160 (584)
T ss_pred c-chhhhhhhhCCEEEECCCceEEe
Confidence 5 57899999999999999877754
No 138
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.19 E-value=0.0041 Score=55.51 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=66.8
Q ss_pred HHHHHhcCCCcEEEEEcceeechhhcccccCCeE--EEeCceEEeccccccCccCCcchHHH-Hhh-c------------
Q 017069 122 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFY-LSH-L------------ 185 (378)
Q Consensus 122 l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~--ia~~~a~f~~pe~~~Gl~p~~g~~~~-l~r-~------------ 185 (378)
++..+...+.||...+-|.|...|..|++++|.. ++.+++++-.....-|+ -+...=.. -.+ +
T Consensus 77 Iydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~gg~-~G~a~Di~i~A~ei~~~~~~l~~i~a 155 (200)
T COG0740 77 IYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPSGGA-QGQASDIEIHAREILKIKERLNRIYA 155 (200)
T ss_pred HHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCCccC-ccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677999999999999999999999999986 99999988876666332 22111000 000 1
Q ss_pred --chHH---HHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 186 --PGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 186 --~g~~---a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
-|.. -....-....++|+||+++||||+|....+.
T Consensus 156 ~~TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~~ 195 (200)
T COG0740 156 EHTGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESREA 195 (200)
T ss_pred HHcCCCHHHHHHhhcccccCCHHHHHHcCCcceecccccc
Confidence 1111 1222334556899999999999999987553
No 139
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=96.99 E-value=0.013 Score=53.33 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCce--EEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017069 59 NTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (378)
Q Consensus 59 ~~~~~~eL~~~l~~~~~d~~v~--~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaa 136 (378)
+.++.+.+...|-.++.++..+ -+-|-+.|+...+|-=+... .....++..+...+-||...
T Consensus 50 ~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~v----------------~~glaIyD~m~~ik~~V~Tv 113 (222)
T PRK12552 50 GMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFE----------------TEAFAICDTMRYIKPPVHTI 113 (222)
T ss_pred hHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCcccccccccc----------------ccHHHHHHHHHhcCCCeEEE
Confidence 3448888888777776543222 34455556554444100000 01123444566677889999
Q ss_pred EcceeechhhcccccCCe--EEEeCceEEeccccccCccCCcchHHHHh------------------hcchH--H-HHHH
Q 017069 137 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYLS------------------HLPGH--L-GEFL 193 (378)
Q Consensus 137 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~~g~--~-a~~l 193 (378)
+-|.|.+.+.-|++++|- |++.++++|.+.....|.. |.+.-+. ..-|. . -...
T Consensus 114 ~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~---G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~d 190 (222)
T PRK12552 114 CIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR---GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSKD 190 (222)
T ss_pred EEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 999999999999999995 8999999999877664532 2211111 11111 1 1233
Q ss_pred HhcCCCCCHHHHHHcCccceecCCC
Q 017069 194 ALTGAKLNGAEMMACGLATHYSVSE 218 (378)
Q Consensus 194 ~ltG~~~~a~eA~~~Glv~~vv~~~ 218 (378)
+-....++|+||+++||||+|+.+.
T Consensus 191 ~~rd~wmsA~EA~eyGliD~Ii~~~ 215 (222)
T PRK12552 191 TDRMFYLTPQEAKEYGLIDRVLESR 215 (222)
T ss_pred hcCCCcCCHHHHHHcCCCcEEeccC
Confidence 3444569999999999999999754
No 140
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.67 E-value=0.019 Score=59.11 Aligned_cols=139 Identities=15% Similarity=0.194 Sum_probs=84.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|+++-.|..-+.-+++......+.++++.+.++. +-+|.|.-.| |+.+.+-. .....+...+...
T Consensus 84 v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dSg-----Garm~eg~--------~~l~~~~~~~~~~- 148 (512)
T TIGR01117 84 VYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDSG-----GARIQEAV--------DALKGYGDIFYRN- 148 (512)
T ss_pred EEEEEECCcccccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecCC-----CCCccccc--------hhhhhHHHHHHHH-
Confidence 5555555544678899999999999999988765 5566665533 33332100 0001111111111
Q ss_pred HHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCce-EEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCCCCH
Q 017069 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a-~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a 202 (378)
...+-.+|.|+++.|+|.||+......||++|+++++ .+.+. +...+.. .+|+.+++
T Consensus 149 -~~~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a-----------GP~vv~~----------~~Ge~v~~ 206 (512)
T TIGR01117 149 -TIASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT-----------GPQVIKT----------VTGEEVTA 206 (512)
T ss_pred -HHHcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec-----------ChHHHHh----------hcCcccch
Confidence 1123458999999999999998777799999999964 44431 1111111 34555555
Q ss_pred HHH-------HHcCccceecCCCC
Q 017069 203 AEM-------MACGLATHYSVSEK 219 (378)
Q Consensus 203 ~eA-------~~~Glv~~vv~~~~ 219 (378)
++. ..-|.+|.++++++
T Consensus 207 e~lGGa~~h~~~sGv~d~~~~de~ 230 (512)
T TIGR01117 207 EQLGGAMAHNSVSGVAHFIAEDDD 230 (512)
T ss_pred hhcchHHHhccccceeEEecCChH
Confidence 554 25899999887654
No 141
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=96.54 E-value=0.0025 Score=59.41 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=64.3
Q ss_pred HHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCC
Q 017069 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK 199 (378)
Q Consensus 120 ~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~ 199 (378)
.+-+..+.++++|+||.|=|---+||+-=...+|.+.|-++++|+. +.|.++++.+|..---.. + +-....
T Consensus 178 A~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~~ka~--e-AAe~mk 248 (317)
T COG0825 178 ARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDASKAK--E-AAEAMK 248 (317)
T ss_pred HHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcChhhhH--H-HHHHcC
Confidence 3344557889999999998886555544344589999999999883 567776666554432222 1 123458
Q ss_pred CCHHHHHHcCccceecCC
Q 017069 200 LNGAEMMACGLATHYSVS 217 (378)
Q Consensus 200 ~~a~eA~~~Glv~~vv~~ 217 (378)
++|++.+++|+||.|+|.
T Consensus 249 ita~dLk~lgiID~II~E 266 (317)
T COG0825 249 ITAHDLKELGIIDGIIPE 266 (317)
T ss_pred CCHHHHHhCCCcceeccC
Confidence 999999999999999985
No 142
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=96.52 E-value=0.046 Score=56.84 Aligned_cols=143 Identities=13% Similarity=0.106 Sum_probs=87.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|+++-.|..-+.-+++......+.++++.+.+.. +-+|.|.-.|+.+-.+ ....+. ....+ ..+..-.
T Consensus 131 V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSgGarl~~-q~e~~~---------~~~~~-g~if~~~ 198 (569)
T PLN02820 131 CMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSGGANLPR-QAEVFP---------DRDHF-GRIFYNQ 198 (569)
T ss_pred EEEEEECCCccCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCCcc-cccccc---------hHhHH-HHHHHHH
Confidence 5555555444678999999999999999987664 5677666544333211 000000 00011 1111122
Q ss_pred HHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCc-eEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCCCCH
Q 017069 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a 202 (378)
..+....+|.|++|.|+|.|||.....+||++|++++ +.+.+. +...+. ..+|+.+++
T Consensus 199 ~~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~a-----------GP~vV~----------~~~Ge~v~~ 257 (569)
T PLN02820 199 ARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLA-----------GPPLVK----------AATGEEVSA 257 (569)
T ss_pred HHHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEec-----------CHHHHH----------hhcCcccCH
Confidence 2345567999999999999999999999999999874 545431 111111 245666666
Q ss_pred HHHH-------HcCccceecCCCC
Q 017069 203 AEMM-------ACGLATHYSVSEK 219 (378)
Q Consensus 203 ~eA~-------~~Glv~~vv~~~~ 219 (378)
++.- .-|.+|.+++++.
T Consensus 258 eeLGGa~~h~~~sGv~d~~~~de~ 281 (569)
T PLN02820 258 EDLGGADVHCKVSGVSDHFAQDEL 281 (569)
T ss_pred HHhCCHHHhcccccccccccCchH
Confidence 6552 4788888887654
No 143
>PRK10949 protease 4; Provisional
Probab=96.44 E-value=0.042 Score=57.77 Aligned_cols=85 Identities=15% Similarity=0.033 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcce
Q 017069 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (378)
Q Consensus 61 ~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~ 140 (378)
-.+.++.++|+.+..|+.|++|||.-.+. .|..+..+ ..+.+.+..+....|||||.-+.+
T Consensus 95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~----------------~eI~~ai~~fk~sGKpVvA~~~~~ 155 (618)
T PRK10949 95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSM----------------QYIGKALREFRDSGKPVYAVGDSY 155 (618)
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHH----------------HHHHHHHHHHHHhCCeEEEEecCc
Confidence 34568999999999999999999998631 12222111 112233334456789999964444
Q ss_pred eechhhcccccCCeEEEeCceEEec
Q 017069 141 TMGGGAGVSIPGTFRVACGKTVFAT 165 (378)
Q Consensus 141 a~GgG~~lal~~D~~ia~~~a~f~~ 165 (378)
--+|+-|+.+||-+++.+.+.+++
T Consensus 156 -~s~~YyLASaAD~I~l~P~G~v~~ 179 (618)
T PRK10949 156 -SQGQYYLASFANKIYLSPQGVVDL 179 (618)
T ss_pred -cchhhhhhhhCCEEEECCCceEEE
Confidence 456899999999999999776654
No 144
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=96.37 E-value=0.058 Score=50.10 Aligned_cols=147 Identities=14% Similarity=0.177 Sum_probs=96.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
|+...++..--.-.|..-.=+.+..+++.+-++ .+.+|+++..| |+-+.+-. -.+.+ .......+
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~-k~P~v~f~aSG-----GARMQEg~--------lSLMQ-MaktsaAl 188 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIED-KLPLVLFSASG-----GARMQEGI--------LSLMQ-MAKTSAAL 188 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHh-CCCEEEEecCc-----chhHhHHH--------HHHHH-HHHHHHHH
Confidence 555666655456778888888899999888765 47889988754 33333211 01111 12233445
Q ss_pred HHHhcCCCcEEEEEcceeech-hhcccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCCCCH
Q 017069 124 YLLGTHLKPHVAILNGVTMGG-GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~G~a~Gg-G~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a 202 (378)
.++.....|.|+.+..+..|| -+.+++..|+.||.++|.++|.-.++ +-..++.. +-.| -=++
T Consensus 189 ~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV-----------IEQTire~----LPeg-fQ~a 252 (294)
T COG0777 189 KRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRV-----------IEQTIREK----LPEG-FQTA 252 (294)
T ss_pred HHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchh-----------hhhhhccc----CCcc-hhhH
Confidence 566778999999999999988 46889999999999888887754331 11111100 0000 1146
Q ss_pred HHHHHcCccceecCCCChh
Q 017069 203 AEMMACGLATHYSVSEKLP 221 (378)
Q Consensus 203 ~eA~~~Glv~~vv~~~~l~ 221 (378)
+-.++.|+||.||+..++.
T Consensus 253 EfLlehG~iD~iv~R~elr 271 (294)
T COG0777 253 EFLLEHGMIDMIVHRDELR 271 (294)
T ss_pred HHHHHcCCceeeecHHHHH
Confidence 6778999999999987664
No 145
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=94.53 E-value=0.4 Score=49.29 Aligned_cols=154 Identities=17% Similarity=0.168 Sum_probs=91.4
Q ss_pred EEEcCCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHH
Q 017069 47 AILNRPSAL-NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (378)
Q Consensus 47 Itln~p~~~-Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (378)
|.=|+|... -+++.+-.....+.++.++. .++-+|.|.-. ..|..|-. .+.....+...+++..
T Consensus 298 iian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~-------------~E~~g~~~~ga~~~~a 362 (493)
T PF01039_consen 298 IIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPE-------------AERAGIIRAGARLLYA 362 (493)
T ss_dssp EEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHH-------------HHHTTHHHHHHHHHHH
T ss_pred EEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccch-------------hhhcchHHHHHHHHHH
Confidence 444555422 26999999999999988886 45777777653 33544432 2223345666778888
Q ss_pred HhcCCCcEEEEEcceeechhhcccccC----CeEEEeCceEEeccccccCccCCcchHHHHhhcchH---------H---
Q 017069 126 LGTHLKPHVAILNGVTMGGGAGVSIPG----TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH---------L--- 189 (378)
Q Consensus 126 i~~~~kP~Iaav~G~a~GgG~~lal~~----D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~---------~--- 189 (378)
+..+.+|+|..|-|.++|||..-.... |+++|.+++.++ +.++.+++..+.+.--. .
T Consensus 363 ~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~~~~~~~~~~~~~~ 435 (493)
T PF01039_consen 363 LAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELEAAEAEGADPEAQR 435 (493)
T ss_dssp HHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHHHSCHCCHSHHHHH
T ss_pred HHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhhhhhcccchhHHHH
Confidence 999999999999999999877443333 788777776665 44444443333321100 0
Q ss_pred HHHHHh-cCCCCCHHHHHHcCccceecCCCChhH
Q 017069 190 GEFLAL-TGAKLNGAEMMACGLATHYSVSEKLPL 222 (378)
Q Consensus 190 a~~l~l-tG~~~~a~eA~~~Glv~~vv~~~~l~~ 222 (378)
...+-- .-+..++..+...|++|.|+++.+...
T Consensus 436 ~~~~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 436 AEKIAEYEDELSSPYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHHHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred HHHHHHHHHhcCCHHHHHhcCCCCCccCHHHHHH
Confidence 011111 112257889999999999999987643
No 146
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=94.05 E-value=0.092 Score=52.38 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=53.6
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHccccCCCCcHHhhHhhh---hcCCCCCCCCCCC
Q 017069 293 STLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEGVRAR---MVDRDIAPKVPFH 364 (378)
Q Consensus 293 ~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egv~af---l~ek~r~P~~~~~ 364 (378)
+++++++..+|.++..+|+.++... ......+..+...+..++. ++|+.|++.+| . +| |.|.|..+
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~~-~~~~~~l~~~~~~i~~~f~---~~d~~ei~~al~~~~-~k-r~~~wa~~ 296 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEVA-HPEKTGVIRRIDLLEKCFS---HDTVEEIIDSLEIEA-GR-RKDTWCIT 296 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhccc-CCcchhHHHHHHHHHHHhc---CCCHHHHHHHHHhhh-cc-cchHHHHH
Confidence 4678888889999999999997652 3456677778888888887 99999999999 6 66 78888654
No 147
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=93.69 E-value=0.31 Score=49.78 Aligned_cols=102 Identities=11% Similarity=0.000 Sum_probs=65.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHH
Q 017069 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (378)
Q Consensus 44 v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (378)
+...--+.+-+.-++..-....+..+.+.+.++..-.+.+..+.| +.+.+=. .. ...+..++.-.
T Consensus 93 ~~v~a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~dsgG------ari~~~v--------~~-l~g~g~iF~~~ 157 (526)
T COG4799 93 VFVFANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDSGG------ARIQEGV--------PS-LAGYGRIFYRN 157 (526)
T ss_pred EEEEEecCceecccccccccchHHHHHHHHHHcCCCEEEEEcccc------cccccCc--------cc-cccchHHHHHH
Confidence 333334445577788888888888888888776544444555443 3332210 00 00111222222
Q ss_pred HHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCce
Q 017069 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161 (378)
Q Consensus 124 ~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a 161 (378)
.++... +|.|++|-|+|.|||.-+...||++|+.++.
T Consensus 158 a~~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 158 ARASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred HHhccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 333444 9999999999999999999999999999984
No 148
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=92.91 E-value=3.2 Score=43.39 Aligned_cols=143 Identities=14% Similarity=0.088 Sum_probs=92.1
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 017069 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (378)
Q Consensus 56 Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia 135 (378)
-+++.+-.....+.++.++. -++-+|.|.-.. .|..|.+-. .....+...+++..+....+|.|+
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~p-Gf~~G~~~E-------------~~G~~~~~a~l~~A~a~~~VP~is 444 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNIT-GFMVGSRSE-------------ASGIAKAGAKMVMAVACAKVPKIT 444 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEECC-CCCCCHHHH-------------HhhHHHHHHHHHHHHHhCCCCEEE
Confidence 45788888888888888775 456777665542 355554322 123456677888888999999999
Q ss_pred EEcceeechhhccc----ccCCeEEEeCceEEeccccccCccCCcchHHHHhhc-c------h------HH-H-HH-H-H
Q 017069 136 ILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------G------HL-G-EF-L-A 194 (378)
Q Consensus 136 av~G~a~GgG~~la----l~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-~------g------~~-a-~~-l-~ 194 (378)
.|-|.++|+|..-. +..|++++.+++. +|+.++.|+...+.+. + | .. + .. + -
T Consensus 445 vi~g~a~G~g~~aM~g~~~~~d~~~awp~A~-------i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (569)
T PLN02820 445 IIVGGSFGAGNYGMCGRAYSPNFLFMWPNAR-------IGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE 517 (569)
T ss_pred EEECCcchHHHHHhcCcCCCCCEEEECCCCe-------EEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHH
Confidence 99999999865333 3567777776555 4555555555544431 1 0 00 0 00 0 1
Q ss_pred hcCCCCCHHHHHHcCccceecCCCCh
Q 017069 195 LTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
..-+..++-.|-+.|+||.|+++.+.
T Consensus 518 ~~~~~~~p~~aa~~~~vD~VIdP~dT 543 (569)
T PLN02820 518 AYEREANPYYSTARLWDDGVIDPADT 543 (569)
T ss_pred HHHHhCCHHHHHHcCCcCcccCHHHH
Confidence 11224567778899999999998765
No 149
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=91.98 E-value=0.72 Score=42.58 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017069 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (378)
Q Consensus 57 al~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaa 136 (378)
.++.++-+.+...|-.++.++.-|=+.+.=. |-|+++.. ...++.++..++-||-..
T Consensus 100 ~Idd~va~~viaqlL~Ld~ed~~K~I~lyIN----SPGG~vta-------------------glAIYDtMq~ik~~V~Ti 156 (275)
T KOG0840|consen 100 PIDDDVANLVIAQLLYLDSEDPKKPIYLYIN----SPGGSVTA-------------------GLAIYDTMQYIKPDVSTI 156 (275)
T ss_pred cCcHHHHHHHHHHHHHhhccCCCCCeEEEEe----CCCCccch-------------------hhhHHHHHHhhCCCceee
Confidence 4788888888888888877665565554433 44444321 112333445555666555
Q ss_pred EcceeechhhcccccCCeEEEeCceEEeccccccCcc-CCcc----hHHHHh---hcchH---H-HHHHHhcC-------
Q 017069 137 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAG----ASFYLS---HLPGH---L-GEFLALTG------- 197 (378)
Q Consensus 137 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~-p~~g----~~~~l~---r~~g~---~-a~~l~ltG------- 197 (378)
+-|.|.+-|.-|..+ ++.+-++++|..++=+- |.+| ..-... .++-. . -.+.-.||
T Consensus 157 c~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~ 231 (275)
T KOG0840|consen 157 CVGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIE 231 (275)
T ss_pred ehhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 667776665544433 23455555555554332 2221 111111 11100 0 11122344
Q ss_pred ------CCCCHHHHHHcCccceecCC
Q 017069 198 ------AKLNGAEMMACGLATHYSVS 217 (378)
Q Consensus 198 ------~~~~a~eA~~~Glv~~vv~~ 217 (378)
+.++|+||+++||||+|+..
T Consensus 232 ~d~dRd~fmsa~EA~eyGliD~v~~~ 257 (275)
T KOG0840|consen 232 KDMDRDRFMSAEEAKEYGLIDKVIDH 257 (275)
T ss_pred hhhcccccCCHHHHHHhcchhhhhcC
Confidence 45899999999999999863
No 150
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=89.50 E-value=5 Score=41.24 Aligned_cols=152 Identities=16% Similarity=0.154 Sum_probs=94.9
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHH
Q 017069 47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (378)
Q Consensus 47 Itln~p~-~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (378)
|.=|.|. ..-.|+.+-...-.+.++ +....++-.|.|.-. ..|..|-|... ....+.-.+++.+
T Consensus 328 iIANqp~~~~G~l~~~sa~KaArFI~-~cd~~~iPlv~L~d~-pGFm~G~~~E~-------------~giik~Gakl~~A 392 (526)
T COG4799 328 IIANQPRHLGGVLDIDSADKAARFIR-LCDAFNIPLVFLVDT-PGFMPGTDQEY-------------GGIIKHGAKLLYA 392 (526)
T ss_pred EEecCccccccccchHHHHHHHHHHH-hhhccCCCeEEEeCC-CCCCCChhHHh-------------ChHHHhhhHHHhh
Confidence 3344454 456789998888888884 444456777776544 56888876432 3345556778889
Q ss_pred HhcCCCcEEEEEcceeechhhcc----cccCCeEEEeCceEEeccccccCccCCcchHHHHhh-cchHH-H--H-H----
Q 017069 126 LGTHLKPHVAILNGVTMGGGAGV----SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL-G--E-F---- 192 (378)
Q Consensus 126 i~~~~kP~Iaav~G~a~GgG~~l----al~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r-~~g~~-a--~-~---- 192 (378)
+....+|.|..|-|-++|||... ++.+|+.+|.+++.+ |+.-+-|+.-.+.+ .+... . . +
T Consensus 393 ~aeatVPkitvI~rkayGga~~~M~~~~~~~~~~~AwP~a~i-------aVMG~egAv~i~~~k~l~~~~~~~~~~~~~~ 465 (526)
T COG4799 393 VAEATVPKITVITRKAYGGAYYVMGGKALGPDFNYAWPTAEI-------AVMGPEGAVSILYRKELAAAERPEEREALLR 465 (526)
T ss_pred HhhccCCeEEEEecccccceeeeecCccCCCceeEecCccee-------eecCHHHHHHHHHHHHhhcccCchhHHHHHH
Confidence 99999999999999999998644 334566665555554 44433444444443 22111 0 0 0
Q ss_pred --H--HhcCCCCCHHHHHHcCccceecCCCCh
Q 017069 193 --L--ALTGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 193 --l--~ltG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
+ -..-+-.++--|.+.|++|.|+++.+.
T Consensus 466 ~~~~~eY~~~~~~p~~aa~r~~iD~vI~p~~t 497 (526)
T COG4799 466 KQLIAEYEEQFSNPYYAAERGYIDAVIDPADT 497 (526)
T ss_pred HHHHHHHHHhccchHHHHHhCCCCcccCHHHH
Confidence 0 011122455567789999999988664
No 151
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=73.65 E-value=30 Score=34.84 Aligned_cols=147 Identities=15% Similarity=0.131 Sum_probs=93.2
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHH
Q 017069 47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (378)
Q Consensus 47 Itln~p~-~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (378)
|.-|+|+ ..-.|..+.-..-.+.++...+ ..+..|.|...++ |..|.+.+.. ...+.-..++..
T Consensus 353 Ivgnn~kf~~G~L~s~sa~KgarfIe~c~q-~~IPLi~l~ni~G-fm~g~~~e~~-------------gIaK~gAklv~a 417 (536)
T KOG0540|consen 353 IVGNNPKFAGGVLFSESAVKGARFIELCDQ-RNIPLIFLQNITG-FMVGRAAEAG-------------GIAKHGAKLVYA 417 (536)
T ss_pred EeccCchhcccccchhhhhhhHHHHHHHHh-cCCcEEEEEccCC-ccccchhhhh-------------chhhhhhhhhhh
Confidence 4445554 3455666666666666665554 4567777776655 8888876532 222334457777
Q ss_pred HhcCCCcEEEEEcceeechhhc---ccccCCeEEEeCceEEeccccccCccCCcchHHHHhhc-----chH--HHHHHHh
Q 017069 126 LGTHLKPHVAILNGVTMGGGAG---VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-----PGH--LGEFLAL 195 (378)
Q Consensus 126 i~~~~kP~Iaav~G~a~GgG~~---lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-----~g~--~a~~l~l 195 (378)
.....+|-|..+.|.++||-.. -.++-|+.++.++|++++--. -++.-.+.+. ... ...+.+
T Consensus 418 ~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~-------~~a~~Vi~q~~~e~a~~~~~~~~E~f- 489 (536)
T KOG0540|consen 418 VACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGG-------KQAANVIFQITLEKAVALKAPYIEKF- 489 (536)
T ss_pred hhhccCceEEEEecCccCCcccccccccCCceeEEcccceeeeccc-------cchhhhhhhhhhhhhhhhcchHHHHh-
Confidence 8889999999999999997554 567789999998888775422 1222223332 111 122222
Q ss_pred cCCCCCHHHHHHcCccceecCCCCh
Q 017069 196 TGAKLNGAEMMACGLATHYSVSEKL 220 (378)
Q Consensus 196 tG~~~~a~eA~~~Glv~~vv~~~~l 220 (378)
|.++. |...||+|.++++.+.
T Consensus 490 -~npy~---a~~Rg~~D~II~p~~t 510 (536)
T KOG0540|consen 490 -GNPYY---AAARGWDDGIIDPSDT 510 (536)
T ss_pred -cCccH---HHHhhccccccChhHh
Confidence 55554 4678999999988765
No 152
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=65.78 E-value=11 Score=36.16 Aligned_cols=80 Identities=8% Similarity=0.084 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHHhcCC---CceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 017069 59 NTNMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (378)
Q Consensus 59 ~~~~~~eL~~~l~~~~~d~---~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia 135 (378)
......++..+|+.+...+ .+.+|||.=.|+++ -||..|. -..+.++|..++.|||+
T Consensus 53 G~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs~---eDL~~FN-----------------~e~varai~~~~~Pvis 112 (319)
T PF02601_consen 53 GEGAAASIVSALRKANEMGQADDFDVIIIIRGGGSI---EDLWAFN-----------------DEEVARAIAASPIPVIS 112 (319)
T ss_pred ccchHHHHHHHHHHHHhccccccccEEEEecCCCCh---HHhcccC-----------------hHHHHHHHHhCCCCEEE
Confidence 4456778888888887654 46666554333222 1222221 13577889999999999
Q ss_pred EEcceeechhhcccccCCeEEEeCc
Q 017069 136 ILNGVTMGGGAGVSIPGTFRVACGK 160 (378)
Q Consensus 136 av~G~a~GgG~~lal~~D~~ia~~~ 160 (378)
+| ||-.-- .-.=+.||+|..|+.
T Consensus 113 aI-GHe~D~-ti~D~vAd~ra~TPt 135 (319)
T PF02601_consen 113 AI-GHETDF-TIADFVADLRAPTPT 135 (319)
T ss_pred ec-CCCCCc-hHHHHHHHhhCCCHH
Confidence 87 333211 112234666666554
No 153
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=65.02 E-value=12 Score=37.97 Aligned_cols=80 Identities=8% Similarity=0.009 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q 017069 59 NTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN 138 (378)
Q Consensus 59 ~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~ 138 (378)
......++..+++.+...+++.+|||.=.|+++ -||..|. -..+.++++.+|.|||++|
T Consensus 168 G~~a~~~i~~al~~~~~~~~~dviii~RGGGs~---eDL~~Fn-----------------~e~~~rai~~~~~Pvis~i- 226 (432)
T TIGR00237 168 GEGAVQSIVESIELANTKNECDVLIVGRGGGSL---EDLWSFN-----------------DEKVARAIFLSKIPIISAV- 226 (432)
T ss_pred CccHHHHHHHHHHHhhcCCCCCEEEEecCCCCH---HHhhhcC-----------------cHHHHHHHHcCCCCEEEec-
Confidence 455678888888888776656676665433322 1332221 1357788999999999987
Q ss_pred ceeechhhcccccCCeEEEeCc
Q 017069 139 GVTMGGGAGVSIPGTFRVACGK 160 (378)
Q Consensus 139 G~a~GgG~~lal~~D~~ia~~~ 160 (378)
||-.-- .-.=+.+|.|..|+.
T Consensus 227 GHe~D~-ti~D~vAd~ra~TPt 247 (432)
T TIGR00237 227 GHETDF-TISDFVADLRAPTPS 247 (432)
T ss_pred CcCCCc-cHHHHhhhccCCCcH
Confidence 232211 111234677766663
No 154
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=60.07 E-value=24 Score=33.36 Aligned_cols=52 Identities=29% Similarity=0.448 Sum_probs=33.5
Q ss_pred HHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceee
Q 017069 67 NKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (378)
Q Consensus 67 ~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~ 142 (378)
.++|+.+++||+.++||+-|.- |.+- .+...++.. . ....|||||.+-|.+.
T Consensus 189 id~L~~fe~Dp~T~~ivmiGEi-----GG~a-----------Ee~AA~~i~-------~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 189 IDALEMFEADPETEAIVMIGEI-----GGPA-----------EEEAAEYIK-------A-NATRKPVVAYIAGRTA 240 (293)
T ss_pred HHHHHHHhcCccccEEEEEecC-----CCcH-----------HHHHHHHHH-------H-hccCCCEEEEEeccCC
Confidence 3778888899999999998861 1111 122223322 2 2345999999999865
No 155
>smart00250 PLEC Plectin repeat.
Probab=56.38 E-value=9 Score=24.43 Aligned_cols=18 Identities=39% Similarity=0.470 Sum_probs=17.0
Q ss_pred cCCCCCHHHHHHcCccce
Q 017069 196 TGAKLNGAEMMACGLATH 213 (378)
Q Consensus 196 tG~~~~a~eA~~~Glv~~ 213 (378)
||++++-.||.+.||+|.
T Consensus 18 t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCcCHHHHHHcCCCCc
Confidence 899999999999999985
No 156
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=55.92 E-value=32 Score=33.28 Aligned_cols=53 Identities=25% Similarity=0.394 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceee
Q 017069 66 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (378)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~ 142 (378)
+.+.|+.+.+||+.++|++.+... | + ..++..+|... ....||||+.+-|..-
T Consensus 212 ~~D~L~~~~~Dp~T~~Ivl~~E~g----G-~-----------~e~~aa~fi~~--------~~~~KPVVa~~aGrsa 264 (317)
T PTZ00187 212 FIDCLKLFLNDPETEGIILIGEIG----G-T-----------AEEEAAEWIKN--------NPIKKPVVSFIAGITA 264 (317)
T ss_pred HHHHHHHHhhCCCccEEEEEEecC----C-c-----------hhHHHHHHHHh--------hcCCCcEEEEEecCCC
Confidence 345666666677777777776521 0 0 01122233322 2358999999998753
No 157
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=51.09 E-value=40 Score=28.35 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcce
Q 017069 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (378)
Q Consensus 65 eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~ 140 (378)
.+.+.++.+.+||++++|++.-.+ + . +. .. +.+..++.... ||||+..-|.
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E~--~---~------------d~---~~----f~~~~~~a~~~-KPVv~lk~Gr 91 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLEG--I---G------------DG---RR----FLEAARRAARR-KPVVVLKAGR 91 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES-------S-------------H---HH----HHHHHHHHCCC-S-EEEEE---
T ss_pred CHHHHHHHHhcCCCCCEEEEEccC--C---C------------CH---HH----HHHHHHHHhcC-CCEEEEeCCC
Confidence 466778888889999999998764 0 0 11 12 23344445555 9999999887
No 158
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=49.47 E-value=6.1 Score=26.33 Aligned_cols=19 Identities=32% Similarity=0.408 Sum_probs=16.4
Q ss_pred hcCCCCCHHHHHHcCccce
Q 017069 195 LTGAKLNGAEMMACGLATH 213 (378)
Q Consensus 195 ltG~~~~a~eA~~~Glv~~ 213 (378)
-||++++-++|++.||+|.
T Consensus 17 ~tg~~lsv~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-H
T ss_pred CCCeEEcHHHHHHCCCcCH
Confidence 4789999999999999986
No 159
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=46.97 E-value=67 Score=24.89 Aligned_cols=49 Identities=8% Similarity=0.038 Sum_probs=35.1
Q ss_pred ceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC
Q 017069 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (378)
Q Consensus 35 ~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g 88 (378)
.+.++..+++.+|++..+ ++......+.+.+..+..++..+.|+|--.+
T Consensus 4 ~i~~~~~~~~~vi~~~G~-----l~~~~~~~~~~~l~~~~~~~~~~~vvidls~ 52 (108)
T TIGR00377 4 NIETEVQEGVVIVRLSGE-----LDAHTAPLLREKVTPAAERTGPRPIVLDLED 52 (108)
T ss_pred EEEEEEECCEEEEEEecc-----cccccHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 567888899999999754 5555566677777665544567788887665
No 160
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=46.90 E-value=42 Score=28.81 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeec
Q 017069 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 143 (378)
Q Consensus 65 eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~G 143 (378)
...++|..+.+||++++|+|-+.+++=+ -. +....+...+..... ....+|+|+.|.|-..-
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~G~g~----~~-----------~~A~~l~~a~~~~~~--~~~~~pvVa~v~GT~~d 121 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVGGIGS----CE-----------DPAAGLIPAIKEAKA--EGRKKPVVARVCGTNAD 121 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSSSS----HH-----------HHHHHHHHHHSHCTH--TTT-SEEEEEEESTTCH
T ss_pred HHHHHHHHHhcCCCccEEEEEeccccCc----hH-----------HHHHHHHHHHHhccc--cCCCCcEEEEeeeecCC
Confidence 3455777788899999999988543111 11 111222222211111 34789999999987655
No 161
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=46.87 E-value=26 Score=32.20 Aligned_cols=146 Identities=12% Similarity=0.023 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHHHHHh-cCCCce-EEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCc
Q 017069 55 LNALNTNMGAKLNKLFKAWE-NDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKP 132 (378)
Q Consensus 55 ~Nal~~~~~~eL~~~l~~~~-~d~~v~-~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP 132 (378)
...+..+.-..|..++.+.- +.+.-- ++|+-..|..++- -+|+. -...++....+.+..-+...-|
T Consensus 40 ~~~vGl~ea~~lA~~V~~~i~~~~krpIv~lVD~~sQa~gr---reEll---------Gi~~alAhla~a~a~AR~~GHp 107 (234)
T PF06833_consen 40 HGEVGLEEAWALAKAVLDTIRSGPKRPIVALVDVPSQAYGR---REELL---------GINQALAHLAKAYALARLAGHP 107 (234)
T ss_pred CCcccHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCccccch---HHHHh---------hHHHHHHHHHHHHHHHHHcCCC
Confidence 56788777777776665443 333222 3344444333321 01111 1233344445555666778899
Q ss_pred EEEEEcceeechhh-cccccCCeEEEeCceEEeccccccCccCCcchHHHHhhcchHHHHHHHhcCCC--CCHHHHHHcC
Q 017069 133 HVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK--LNGAEMMACG 209 (378)
Q Consensus 133 ~Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~--~~a~eA~~~G 209 (378)
||+.|-|.+++||| ...+.+|-.||-+++. +-..+-. +..+..++.=..-.++.-+--. ++.+--.++|
T Consensus 108 vI~Lv~G~A~SGaFLA~GlqA~rl~AL~ga~-------i~vM~~~-s~ARVTk~~ve~Le~la~s~PvfA~gi~ny~~lG 179 (234)
T PF06833_consen 108 VIGLVYGKAMSGAFLAHGLQANRLIALPGAM-------IHVMGKP-SAARVTKRPVEELEELAKSVPVFAPGIENYAKLG 179 (234)
T ss_pred eEEEEecccccHHHHHHHHHhcchhcCCCCe-------eecCChH-HhHHHhhcCHHHHHHHhhcCCCcCCCHHHHHHhc
Confidence 99999999999997 6778888888766433 2222222 2233333221112333333332 3455667899
Q ss_pred ccceecCCCCh
Q 017069 210 LATHYSVSEKL 220 (378)
Q Consensus 210 lv~~vv~~~~l 220 (378)
.++++.+.+..
T Consensus 180 ~l~~l~~~~~~ 190 (234)
T PF06833_consen 180 ALDELWDGDLA 190 (234)
T ss_pred cHHHHhccccc
Confidence 99998885443
No 162
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=45.72 E-value=31 Score=34.84 Aligned_cols=78 Identities=9% Similarity=0.106 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEE-ecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 59 NTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 59 ~~~~~~eL~~~l~~~~~d~~v~~vvl-~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
......++..+|+.++... +.+||| +|.| ++ -||..|. -..+.+++..++.|||++|
T Consensus 174 G~~A~~~i~~al~~~~~~~-~Dviii~RGGG-S~---eDL~~Fn-----------------~e~v~~ai~~~~~Pvis~I 231 (438)
T PRK00286 174 GEGAAASIVAAIERANARG-EDVLIVARGGG-SL---EDLWAFN-----------------DEAVARAIAASRIPVISAV 231 (438)
T ss_pred CccHHHHHHHHHHHhcCCC-CCEEEEecCCC-CH---HHhhccC-----------------cHHHHHHHHcCCCCEEEec
Confidence 3456778888888877643 445544 4432 21 1332221 1357788999999999987
Q ss_pred cceeechhhcccccCCeEEEeCc
Q 017069 138 NGVTMGGGAGVSIPGTFRVACGK 160 (378)
Q Consensus 138 ~G~a~GgG~~lal~~D~~ia~~~ 160 (378)
||-.-- .-.=+.||.|..|+.
T Consensus 232 -GHE~D~-tl~D~vAd~ra~TPt 252 (438)
T PRK00286 232 -GHETDF-TIADFVADLRAPTPT 252 (438)
T ss_pred -cCCCCc-cHHHHhhhccCCChH
Confidence 332211 112234667766664
No 163
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=44.02 E-value=48 Score=33.45 Aligned_cols=58 Identities=10% Similarity=0.141 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 017069 60 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (378)
Q Consensus 60 ~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav 137 (378)
.....++.++++.++..+++.++|+-=.| +-+.++ ..|. -..+.++++.++.|+|++|
T Consensus 175 ~~A~~eIv~aI~~an~~~~~DvlIVaRGG------GSiEDL------------W~FN--dE~vaRAi~~s~iPvISAV 232 (440)
T COG1570 175 EGAAEEIVEAIERANQRGDVDVLIVARGG------GSIEDL------------WAFN--DEIVARAIAASRIPVISAV 232 (440)
T ss_pred CCcHHHHHHHHHHhhccCCCCEEEEecCc------chHHHH------------hccC--hHHHHHHHHhCCCCeEeec
Confidence 34566777777777777667776654322 222222 2221 1347788999999999987
No 164
>PLN02522 ATP citrate (pro-S)-lyase
Probab=40.41 E-value=75 Score=33.65 Aligned_cols=52 Identities=23% Similarity=0.279 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCCCceEEEEecC-CCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceee
Q 017069 66 LNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (378)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~-g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~ 142 (378)
+.+.|+.+.+||++++|++.+. |. .| . .++.+ ..+.. ...||||+.+-|.+-
T Consensus 210 ~~D~L~~~~~Dp~Tk~IvlygEiGg-----~~------------e---~~f~e----a~~~a-~~~KPVVa~kaGrsa 262 (608)
T PLN02522 210 LSDHVLRFNNIPQIKMIVVLGELGG-----RD------------E---YSLVE----ALKQG-KVSKPVVAWVSGTCA 262 (608)
T ss_pred HHHHHHHHhcCCCCCEEEEEEecCc-----hh------------H---HHHHH----HHHHh-cCCCCEEEEeccCCC
Confidence 4556677777788888887776 31 01 1 12222 22222 268999999999876
No 165
>PF14842 FliG_N: FliG N-terminal domain; PDB: 3HJL_A 3AJC_A 3USY_B.
Probab=36.33 E-value=44 Score=26.72 Aligned_cols=85 Identities=22% Similarity=0.298 Sum_probs=43.2
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhcCCCHHHHHHHHHHhcccc----CCCCchhhhHHHHHHH
Q 017069 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLV----YPDKNSVIHRIDIVDK 265 (378)
Q Consensus 190 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 265 (378)
|.-|+..|+...++=..+ .+++++..+..+++++..-+++.+..+++.|.... .....+...-.+++.+
T Consensus 12 AilLl~Lgee~Aa~vlk~-------l~~~ei~~i~~~ma~l~~v~~~~~~~Vl~EF~~~~~~~~~~~~gg~~~~~~lL~~ 84 (108)
T PF14842_consen 12 AILLLALGEEAAAEVLKH-------LDEEEIERISREMAKLGSVSPEEVEEVLEEFYDEIRAQGGIVSGGRDFARRLLEK 84 (108)
T ss_dssp HHHHHHS-HHHHHHHHHH-------S-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHTT---S-HHHHHHH-HHH
T ss_pred HHHHHHHCHHHHHHHHcc-------CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHccccccChHHHHHHHHHH
Confidence 445555566555443333 46677777888899998899999999988877733 2333334444667778
Q ss_pred hcCCCCHHHHHHHHHh
Q 017069 266 CFGLDTVEEIIDSLES 281 (378)
Q Consensus 266 ~f~~~~~~~i~~~l~~ 281 (378)
.|+.+.+.+|++.+..
T Consensus 85 alg~~~a~~il~~~~~ 100 (108)
T PF14842_consen 85 ALGEEKAKEILDRLEQ 100 (108)
T ss_dssp HS---HHHHH------
T ss_pred HCCHHHHHHHHHHHhc
Confidence 8888777777776653
No 166
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=36.18 E-value=1.6e+02 Score=22.70 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=33.9
Q ss_pred EEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC
Q 017069 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (378)
Q Consensus 37 ~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g 88 (378)
.++..+++.+++++.| ++.....++.+.+..+-..+.++.+||.-.+
T Consensus 2 ~~~~~~~~~vi~l~G~-----L~f~~~~~~~~~l~~~~~~~~~~~vilDls~ 48 (106)
T TIGR02886 2 EFEVKGDVLIVRLSGE-----LDHHTAERVRRKIDDAIERRPIKHLILNLKN 48 (106)
T ss_pred eEEEECCEEEEEEecc-----cchhhHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4577889999999765 5666677777777665433457888887766
No 167
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=35.67 E-value=1e+02 Score=28.39 Aligned_cols=54 Identities=7% Similarity=0.077 Sum_probs=41.0
Q ss_pred CCCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCc
Q 017069 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF 91 (378)
Q Consensus 32 ~~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F 91 (378)
.|..|.+...|.+. .++..+.+|.+.+..+...++++... .+++-|+.|.|+.|
T Consensus 4 ~~~rillkLsGe~l-----~g~~~~gid~~~i~~~a~~i~~~~~~-g~eV~iVvGGGni~ 57 (238)
T COG0528 4 KYMRILLKLSGEAL-----AGEQGFGIDPEVLDRIANEIKELVDL-GVEVAVVVGGGNIA 57 (238)
T ss_pred ceEEEEEEeeccee-----cCCCCCCCCHHHHHHHHHHHHHHHhc-CcEEEEEECCCHHH
Confidence 45667777766654 24445789999999999999999865 57888888887655
No 168
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=30.27 E-value=1.3e+02 Score=28.00 Aligned_cols=55 Identities=27% Similarity=0.468 Sum_probs=35.3
Q ss_pred HHHHHHHHhcCCCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEccee
Q 017069 66 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 141 (378)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a 141 (378)
+.++|+.+-.|++.+.+|+-|.= |+. ..++..+|+... .-..-+||||+.+.|..
T Consensus 219 FID~L~vFl~D~~t~GIiliGEI-----GG~-----------AEe~AA~flk~~-----nSg~~~kPVvsFIAG~t 273 (329)
T KOG1255|consen 219 FIDCLEVFLEDPETEGIILIGEI-----GGS-----------AEEEAAEFLKEY-----NSGSTAKPVVSFIAGVT 273 (329)
T ss_pred HHHHHHHHhcCcccceEEEEecc-----CCh-----------hhHHHHHHHHHh-----ccCCCCCceeEEeeccc
Confidence 56677888889999999999861 111 122333443332 12457899999998753
No 169
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=30.24 E-value=2.1e+02 Score=22.47 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=39.5
Q ss_pred eEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--------ceEEEEecCC
Q 017069 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--------IGFVSMKGSG 88 (378)
Q Consensus 36 v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~--------v~~vvl~g~g 88 (378)
+.++..+++.+++++.| ++......+.+.+..+..... .+.|||--.+
T Consensus 2 ~~~~~~~~v~ii~~~g~-----l~f~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vIlD~s~ 57 (117)
T PF01740_consen 2 IEIETHDGVLIIRLDGP-----LFFANAEEFRDRIRKLIDEDPERIKKRQTIKNVILDMSG 57 (117)
T ss_dssp CEEEEETTEEEEEEESE-----ESHHHHHHHHHHHHHHHCCSSS--HTSSSSSEEEEEETT
T ss_pred CeeEEECCEEEEEEeeE-----EEHHHHHHHHHHHHHhhhcccccccccccceEEEEEEEe
Confidence 35778899999999876 788889999999988877654 7899998765
No 170
>PF00191 Annexin: Annexin; InterPro: IPR018502 The annexins (or lipocortins) are a family of proteins that bind to phospholipids in a calcium-dependent manner []. They are distributed ubiquitously in different tissues and cell types of higher and lower eukaryotes, including mammals, fish, birds, Drosophila melanogaster (Fruit fly), Xenopus laevis (African clawed frog), Caenorhabditis elegans , Dictyostelium discoideum (Slime mold) and Neurospora crassa [, ]. Annexins are absent from yeasts and prokaryotes []. The plant annexins are somewhat distinct from those found in other taxa []. Most eukaryotic species have 1-20 annexin (ANX) genes. All annexins share a core domain made up of four similar repeats, each approximately 70 amino acids long []. Each individual annexin repeat (sometimes referred to as endonexin folds) is folded into five alpha-helices, and in turn are wound into a right-handed super-helix; they usually contain a characteristic 'type 2' motif for binding calcium ions with the sequence 'GxGT-[38 residues]-D/E'. Animal and fungal annexins also have variable amino-terminal domains. The core domains of most vertebrate annexins have been analysed by X-ray crystallography, revealing conservation of their secondary and tertiary structures despite only 45-55% amino-acid identity among individual members. The four repeats pack into a structure that resembles a flattened disc, with a slightly convex surface on which the Ca 2+ -binding loops are located and a concave surface at which the amino and carboxyl termini come into close apposition. Annexins are traditionally thought of as calcium-dependent phospholipid-binding proteins, but recent work suggests a more complex set of functions. The famiy has been linked with inhibition of phospholipase activity, exocytosis and endoctyosis, signal transduction, organisation of the extracellular matrix, resistance to reactive oxygen species and DNA replication [].; GO: 0005509 calcium ion binding, 0005544 calcium-dependent phospholipid binding; PDB: 1N44_A 1BC1_A 2IE6_A 2H0M_A 1A8B_A 2H0K_A 1BCW_A 1BCZ_A 1N42_A 1BC0_A ....
Probab=30.11 E-value=1.3e+02 Score=21.08 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=30.3
Q ss_pred HHHHHHhcCchHHHHHHHHHHHhhcCCHHHHHHHHH
Q 017069 294 TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREY 329 (378)
Q Consensus 294 ~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~ 329 (378)
+.+-+...++.-++.++..+..-...++.+.++.|.
T Consensus 20 li~Il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~e~ 55 (66)
T PF00191_consen 20 LIEILCTRSPAQLRAIKQAYKKKYGKDLEEDIKKET 55 (66)
T ss_dssp HHHHHHHSTHHHHHHHHHHHHHHHSS-HHHHHHHHS
T ss_pred hhhHHhhhcccccceeehhhhhhhHHHHHHHHHHhC
Confidence 467788899999999999999988999999888775
No 171
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=29.89 E-value=1.2e+02 Score=29.00 Aligned_cols=12 Identities=50% Similarity=0.728 Sum_probs=10.6
Q ss_pred CCcEEEEEccee
Q 017069 130 LKPHVAILNGVT 141 (378)
Q Consensus 130 ~kP~Iaav~G~a 141 (378)
.||||+..-|..
T Consensus 233 ~KPVV~lk~Grs 244 (300)
T PLN00125 233 EKPVVAFIAGLT 244 (300)
T ss_pred CCCEEEEEecCC
Confidence 899999988875
No 172
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=29.23 E-value=5e+02 Score=24.95 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=69.8
Q ss_pred ccCCCceEEEeeCCE---E-EEEEcCCCCCCCCCHHHHHHHHHHH-HHHhcCCCceEEEEecCC-CCcccCCC-hhhHHH
Q 017069 30 DDLCNQVLVEGKANS---R-MAILNRPSALNALNTNMGAKLNKLF-KAWENDPNIGFVSMKGSG-RAFCAGGD-IVSLYH 102 (378)
Q Consensus 30 ~~~~~~v~~~~~~~v---~-~Itln~p~~~Nal~~~~~~eL~~~l-~~~~~d~~v~~vvl~g~g-~~F~~G~D-l~~~~~ 102 (378)
...++.+.+-.+|++ - +|... ...|.++++-+.+-...+ .++...+.-++.||-|.. +.|--+-+ ...+..
T Consensus 95 ~~~FDlvi~p~HD~~~~~~Nvl~t~--ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~ 172 (311)
T PF06258_consen 95 PRPFDLVIVPEHDRLPRGPNVLPTL--GAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLD 172 (311)
T ss_pred ccccCEEEECcccCcCCCCceEecc--cCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHH
Confidence 456777777555544 1 12222 236999999888876665 445555666666666643 66644443 112211
Q ss_pred ----hhcc--------CChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhcccccCCeEEEeCceEEecccc
Q 017069 103 ----FMNQ--------GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168 (378)
Q Consensus 103 ----~~~~--------~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~ 168 (378)
.... .+...-.+....+.+. +. +.|-+...+|.--+--+++...||.+++|+++.=.+.|+
T Consensus 173 ~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~---~~--~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA 245 (311)
T PF06258_consen 173 QLAALAAAYGGSLLVTTSRRTPPEAEAALREL---LK--DNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEA 245 (311)
T ss_pred HHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHh---hc--CCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHH
Confidence 1100 0111111222222111 11 234443446655566678888999999999876555554
No 173
>PRK06091 membrane protein FdrA; Validated
Probab=25.82 E-value=1.8e+02 Score=30.39 Aligned_cols=22 Identities=32% Similarity=0.336 Sum_probs=15.1
Q ss_pred HHHHHHhcCCCcEEEEEcceee
Q 017069 121 SFIYLLGTHLKPHVAILNGVTM 142 (378)
Q Consensus 121 ~l~~~i~~~~kP~Iaav~G~a~ 142 (378)
++......+.||||+..-|..-
T Consensus 270 ~fl~aar~~~KPVVvlk~Grs~ 291 (555)
T PRK06091 270 KIINAMKATGKPVVALFLGYTP 291 (555)
T ss_pred HHHHHHhhCCCCEEEEEecCCc
Confidence 3334444569999999988643
No 174
>PRK14556 pyrH uridylate kinase; Provisional
Probab=24.94 E-value=1.9e+02 Score=26.96 Aligned_cols=55 Identities=13% Similarity=0.151 Sum_probs=42.3
Q ss_pred CCceEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccc
Q 017069 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93 (378)
Q Consensus 33 ~~~v~~~~~~~v~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~F~~ 93 (378)
|..|.+...|.+.. +++.+.++.+.+..+.+.++.+.+. .+++.|+.|.|+.|..
T Consensus 15 ~~rvllKlsGe~l~-----~~~~~~~d~~~~~~~a~~i~~~~~~-g~~i~iVvGGGni~Rg 69 (249)
T PRK14556 15 LKRILLKLSGESLS-----ADQGFGINVESAQPIINQIKTLTNF-GVELALVVGGGNILRG 69 (249)
T ss_pred hCEEEEEEehhhCc-----CCCCCCcCHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHhC
Confidence 56677777666442 3346789999999999999998764 4789999999887764
No 175
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=24.50 E-value=1.4e+02 Score=31.16 Aligned_cols=71 Identities=17% Similarity=0.115 Sum_probs=44.0
Q ss_pred CCceEEEEecCCCCcccCCChhhHHHhhccCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEcceeechhhccccc
Q 017069 77 PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIP 151 (378)
Q Consensus 77 ~~v~~vvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Iaav~G~a~GgG~~lal~ 151 (378)
|++-|+|-|-..--+-.|.+..++. ..+.+....-+..+.+.+..+.++.+|+|.+||-+..---.++..-
T Consensus 323 P~~~VlVaTvraLK~hgg~~~~~l~----~en~Eal~sGl~NL~RHIenvr~FGvPvVVAINKFd~DTe~Ei~~I 393 (557)
T PRK13505 323 PDAVVIVATVRALKMHGGVAKDDLK----EENVEALKKGFANLERHIENIRKFGVPVVVAINKFVTDTDAEIAAL 393 (557)
T ss_pred CCEEEEEeehHHHHHcCCCChhhcc----ccCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCHHHHHHH
Confidence 4444444443332233344444332 3345566667778888888899999999999998877665555443
No 176
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.98 E-value=6.7e+02 Score=23.91 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=72.0
Q ss_pred CCCceEEEeeCCE--------EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCChhhH-H
Q 017069 32 LCNQVLVEGKANS--------RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSL-Y 101 (378)
Q Consensus 32 ~~~~v~~~~~~~v--------~~Itln~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g-~~F~~G~Dl~~~-~ 101 (378)
+++-|.+-.+|.+ -++.|+.. .|-+|...+....+++.+.--.+.-++-||-|.. +.|.---|-... .
T Consensus 109 ~fDlvivp~HD~~~~~s~~~~Nilpi~Gs--~h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~ 186 (329)
T COG3660 109 HFDLVIVPYHDWREELSDQGPNILPINGS--PHNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFA 186 (329)
T ss_pred cceEEeccchhhhhhhhccCCceeeccCC--CCcccHHHhhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHH
Confidence 4555655555544 35667664 4789999999999999998656666666666654 777654443221 1
Q ss_pred H----hhccCChHHHHHHHHHHHHHHHHH-h-cCCCcEEEEEcceeec--hhhcccccCCeEEEeCceEEeccc
Q 017069 102 H----FMNQGKLEECKDFFRTLYSFIYLL-G-THLKPHVAILNGVTMG--GGAGVSIPGTFRVACGKTVFATPE 167 (378)
Q Consensus 102 ~----~~~~~~~~~~~~~~~~~~~l~~~i-~-~~~kP~Iaav~G~a~G--gG~~lal~~D~~ia~~~a~f~~pe 167 (378)
. ..........-.+.++.-.....+ . +++--.+...++---| --+.+..++|+.|++.++.=...|
T Consensus 187 ~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSinM~sE 260 (329)
T COG3660 187 SLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSINMCSE 260 (329)
T ss_pred HHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchhhhhHH
Confidence 1 110000000000000000111111 1 2344446667776333 346788899999999887533333
No 177
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=22.96 E-value=3e+02 Score=26.55 Aligned_cols=31 Identities=16% Similarity=0.000 Sum_probs=22.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEec
Q 017069 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86 (378)
Q Consensus 56 Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g 86 (378)
.-|+++.+.+|.+.+++.-+++++.++|||.
T Consensus 55 s~~t~~~w~~la~~i~~~~~~~~~dG~VVtH 85 (323)
T smart00870 55 SNMTPADWLKLAKRINEALADDGYDGVVVTH 85 (323)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCCEEEEec
Confidence 3489999999999998765555665555544
No 178
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=22.12 E-value=1.4e+02 Score=24.52 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=31.1
Q ss_pred EEEEEEcCCCCCCC--CC----------HHHHHHHHHHHHHH--hcCCCceEEEEecCC
Q 017069 44 SRMAILNRPSALNA--LN----------TNMGAKLNKLFKAW--ENDPNIGFVSMKGSG 88 (378)
Q Consensus 44 v~~Itln~p~~~Na--l~----------~~~~~eL~~~l~~~--~~d~~v~~vvl~g~g 88 (378)
+..|+.+-|.|... .+ ..++.++.+.+... ...+.++.|||.|.|
T Consensus 25 ~~~i~~~ip~K~~~Gg~s~~rf~r~~~~~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 25 LQRIESNIPGKHKKGGQSQRRFEREKALEKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp EEEEE-GHCCCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred EEEEEecCCCccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 45677777877653 22 35677777777776 556789999999975
No 179
>COG0252 AnsB L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]
Probab=21.49 E-value=2.6e+02 Score=27.44 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=24.9
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEec
Q 017069 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86 (378)
Q Consensus 56 Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g 86 (378)
.-|+++.+.+|.+.+.+.-.++++.+||||.
T Consensus 78 ~~m~~~~w~~la~~I~~~~~~~~~dGvVItH 108 (351)
T COG0252 78 SDMTPEDWLRLAEAINEALDDGDVDGVVITH 108 (351)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCCeEEEeC
Confidence 5599999999999999988777666666654
No 180
>smart00463 SMR Small MutS-related domain.
Probab=21.23 E-value=1.9e+02 Score=21.29 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHhcCCC-ceEEEEecCCCC
Q 017069 60 TNMGAKLNKLFKAWENDPN-IGFVSMKGSGRA 90 (378)
Q Consensus 60 ~~~~~eL~~~l~~~~~d~~-v~~vvl~g~g~~ 90 (378)
.+.+..|...|+.+..... -.+.||||.|..
T Consensus 12 ~eA~~~l~~~l~~~~~~~~~~~~~II~G~G~~ 43 (80)
T smart00463 12 EEALTALDKFLNNARLKGLEQKLVIITGKGKH 43 (80)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEcccCC
Confidence 4677888888888887765 578999999854
No 181
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=20.45 E-value=1.9e+02 Score=26.52 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=28.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCC
Q 017069 51 RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA 90 (378)
Q Consensus 51 ~p~~~Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g~~ 90 (378)
.++....++.+.++++.+.++.+. ..++|+++|.|..
T Consensus 13 ~~~~~~~~~~~~l~~l~~~l~~l~---g~~vvlVhGgg~~ 49 (252)
T cd04241 13 DKDRPETIREENLERIARELAEAI---DEKLVLVHGGGSF 49 (252)
T ss_pred cCCCCCccCHHHHHHHHHHHHhcc---CCCEEEEECCCcc
Confidence 333356799999999999998875 4678999987643
No 182
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D. This peptide is found only in the Archaea. It is part of a heterodimer, with GatE (TIGR00134), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn).
Probab=20.15 E-value=3.4e+02 Score=27.25 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC
Q 017069 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (378)
Q Consensus 56 Nal~~~~~~eL~~~l~~~~~d~~v~~vvl~g~g 88 (378)
.-|+++.+.+|.+.+.+.-.++.-.+||.+|..
T Consensus 118 ~~mtp~~w~~La~~I~~~~~~~~dGvVVtHGTD 150 (404)
T TIGR02153 118 ENMKPEYWIKIAEAVAKALKEGADGVVVAHGTD 150 (404)
T ss_pred hhCCHHHHHHHHHHHHHHhhcCCCcEEEecCCh
Confidence 347888899999988776544333566666653
Done!