Query 017071
Match_columns 378
No_of_seqs 414 out of 3778
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 08:27:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 1.5E-47 5E-52 369.5 27.4 312 57-375 2-368 (481)
2 2r2j_A Thioredoxin domain-cont 100.0 2.4E-47 8.3E-52 356.6 20.7 306 56-372 5-366 (382)
3 3us3_A Calsequestrin-1; calciu 100.0 1.2E-45 4.1E-50 342.8 29.0 289 54-350 11-351 (367)
4 1sji_A Calsequestrin 2, calseq 100.0 5.1E-45 1.7E-49 337.2 28.1 286 55-350 10-349 (350)
5 2b5e_A Protein disulfide-isome 100.0 9.7E-44 3.3E-48 344.6 18.8 306 54-376 12-375 (504)
6 3ed3_A Protein disulfide-isome 100.0 3.5E-34 1.2E-38 257.6 22.2 223 52-275 13-279 (298)
7 3apo_A DNAJ homolog subfamily 100.0 1.7E-32 5.9E-37 279.0 24.9 287 54-350 114-545 (780)
8 3idv_A Protein disulfide-isome 100.0 8E-32 2.7E-36 235.9 24.1 208 54-267 13-239 (241)
9 3apo_A DNAJ homolog subfamily 100.0 2.8E-31 9.7E-36 270.1 26.4 281 56-348 440-768 (780)
10 2h8l_A Protein disulfide-isome 100.0 6.9E-28 2.4E-32 212.0 13.4 201 158-366 2-250 (252)
11 3ec3_A Protein disulfide-isome 99.9 3.3E-27 1.1E-31 207.2 15.0 194 159-360 3-243 (250)
12 3q6o_A Sulfhydryl oxidase 1; p 99.9 9.7E-25 3.3E-29 191.1 25.7 203 54-262 10-237 (244)
13 1a8l_A Protein disulfide oxido 99.9 1E-24 3.6E-29 188.7 20.4 194 64-263 10-224 (226)
14 2ywm_A Glutaredoxin-like prote 99.9 2.4E-24 8.3E-29 186.8 21.3 192 64-263 9-218 (229)
15 2ppt_A Thioredoxin-2; thiredox 99.9 1.6E-24 5.5E-29 175.8 16.7 137 26-162 17-153 (155)
16 3p2a_A Thioredoxin 2, putative 99.9 2.5E-24 8.7E-29 173.6 16.1 137 26-162 8-144 (148)
17 3zzx_A Thioredoxin; oxidoreduc 99.9 4.8E-24 1.6E-28 160.8 14.4 99 59-159 3-104 (105)
18 4f9z_D Endoplasmic reticulum r 99.9 2.6E-24 9E-29 186.1 13.8 183 162-349 9-227 (227)
19 3uem_A Protein disulfide-isome 99.9 3.3E-23 1.1E-27 192.1 22.0 205 56-264 117-356 (361)
20 2qsi_A Putative hydrogenase ex 99.9 6.9E-24 2.4E-28 164.6 13.0 105 56-160 15-122 (137)
21 3t58_A Sulfhydryl oxidase 1; o 99.9 1.8E-22 6.3E-27 193.5 25.9 204 54-262 10-237 (519)
22 3uem_A Protein disulfide-isome 99.9 1.1E-23 3.9E-28 195.2 16.2 212 160-376 15-266 (361)
23 2qgv_A Hydrogenase-1 operon pr 99.9 4.7E-24 1.6E-28 166.2 10.6 109 57-165 18-129 (140)
24 3gnj_A Thioredoxin domain prot 99.9 5.9E-23 2E-27 156.9 16.0 106 56-161 4-110 (111)
25 3h79_A Thioredoxin-like protei 99.9 3E-23 1E-27 162.7 14.2 106 54-159 13-126 (127)
26 2voc_A Thioredoxin; electron t 99.9 5.2E-23 1.8E-27 157.6 13.6 107 57-164 2-108 (112)
27 2av4_A Thioredoxin-like protei 99.9 3E-23 1E-27 163.3 11.9 103 58-160 23-138 (160)
28 3tco_A Thioredoxin (TRXA-1); d 99.9 1.4E-22 4.7E-27 154.2 14.9 105 56-160 4-108 (109)
29 2dj1_A Protein disulfide-isome 99.9 1.8E-22 6.2E-27 161.0 15.8 114 52-166 13-129 (140)
30 3die_A Thioredoxin, TRX; elect 99.9 1.5E-22 5.1E-27 153.2 14.4 103 56-159 3-105 (106)
31 2trx_A Thioredoxin; electron t 99.9 2.2E-22 7.4E-27 153.0 15.1 105 56-160 2-107 (108)
32 1nsw_A Thioredoxin, TRX; therm 99.9 1.5E-22 5.2E-27 153.0 14.0 103 58-160 2-104 (105)
33 3qfa_C Thioredoxin; protein-pr 99.9 1E-22 3.5E-27 156.9 12.9 103 56-160 12-116 (116)
34 1w4v_A Thioredoxin, mitochondr 99.9 4.6E-22 1.6E-26 154.0 15.2 109 52-160 9-118 (119)
35 1x5d_A Protein disulfide-isome 99.9 3.7E-22 1.3E-26 157.7 14.7 108 54-161 5-117 (133)
36 3hz4_A Thioredoxin; NYSGXRC, P 99.9 3E-22 1E-26 159.7 14.3 107 55-161 5-112 (140)
37 2yzu_A Thioredoxin; redox prot 99.9 4.7E-22 1.6E-26 151.2 14.2 105 57-161 2-106 (109)
38 1t00_A Thioredoxin, TRX; redox 99.9 7.8E-22 2.7E-26 151.0 15.4 106 56-161 5-111 (112)
39 3apq_A DNAJ homolog subfamily 99.9 2.7E-22 9.2E-27 171.4 14.1 116 54-169 95-210 (210)
40 2i4a_A Thioredoxin; acidophIle 99.9 7.6E-22 2.6E-26 149.6 14.6 104 56-159 2-106 (107)
41 1v98_A Thioredoxin; oxidoreduc 99.9 5.9E-22 2E-26 158.0 14.3 134 27-162 6-139 (140)
42 1x5e_A Thioredoxin domain cont 99.9 7.3E-22 2.5E-26 154.5 14.5 110 55-167 6-116 (126)
43 2o8v_B Thioredoxin 1; disulfid 99.9 4.6E-22 1.6E-26 156.0 13.3 105 56-160 22-127 (128)
44 3uvt_A Thioredoxin domain-cont 99.9 6.8E-22 2.3E-26 150.9 13.9 103 56-159 5-110 (111)
45 2e0q_A Thioredoxin; electron t 99.9 1E-21 3.4E-26 148.0 14.6 103 58-161 1-103 (104)
46 1dby_A Chloroplast thioredoxin 99.9 8.9E-22 3.1E-26 149.3 14.4 104 57-160 2-106 (107)
47 3f3q_A Thioredoxin-1; His TAG, 99.9 1.2E-21 4.1E-26 149.2 14.9 102 57-160 8-109 (109)
48 1thx_A Thioredoxin, thioredoxi 99.9 1.6E-21 5.6E-26 149.8 15.8 106 56-161 7-113 (115)
49 4euy_A Uncharacterized protein 99.9 1.5E-22 5.1E-27 153.1 9.0 98 62-160 7-104 (105)
50 1gh2_A Thioredoxin-like protei 99.9 2.2E-21 7.4E-26 147.2 15.0 102 58-161 3-107 (107)
51 1fb6_A Thioredoxin M; electron 99.9 2.4E-21 8.1E-26 146.3 15.0 103 58-160 2-105 (105)
52 2dml_A Protein disulfide-isome 99.9 1.2E-21 4.3E-26 154.0 13.8 108 54-161 15-124 (130)
53 2l5l_A Thioredoxin; structural 99.9 2.5E-21 8.4E-26 153.6 15.5 108 55-163 8-128 (136)
54 1r26_A Thioredoxin; redox-acti 99.9 2.7E-21 9.2E-26 150.9 15.4 105 55-161 18-123 (125)
55 2pu9_C TRX-F, thioredoxin F-ty 99.9 2.7E-21 9.1E-26 147.7 15.0 105 54-160 3-110 (111)
56 3hxs_A Thioredoxin, TRXP; elec 99.9 1.3E-21 4.5E-26 156.2 13.7 109 52-161 18-139 (141)
57 1ep7_A Thioredoxin CH1, H-type 99.9 2.5E-21 8.6E-26 148.1 14.6 104 57-161 3-111 (112)
58 1mek_A Protein disulfide isome 99.9 2.7E-22 9.2E-27 155.3 8.5 109 55-163 6-119 (120)
59 3aps_A DNAJ homolog subfamily 99.9 1.1E-21 3.6E-26 152.7 11.7 108 56-163 3-115 (122)
60 2i1u_A Thioredoxin, TRX, MPT46 99.9 2.7E-21 9.4E-26 150.0 13.5 107 54-160 10-117 (121)
61 3d6i_A Monothiol glutaredoxin- 99.9 3.6E-21 1.2E-25 147.2 13.9 103 58-161 2-109 (112)
62 3gix_A Thioredoxin-like protei 99.9 2E-21 7E-26 156.3 12.6 100 61-160 9-120 (149)
63 2hls_A Protein disulfide oxido 99.9 1.9E-20 6.5E-25 163.2 19.4 189 64-264 15-225 (243)
64 1syr_A Thioredoxin; SGPP, stru 99.9 4.6E-21 1.6E-25 146.7 13.7 103 56-160 9-111 (112)
65 1xwb_A Thioredoxin; dimerizati 99.9 6.8E-21 2.3E-25 144.0 14.4 101 58-159 2-105 (106)
66 3ga4_A Dolichyl-diphosphooligo 99.9 3.2E-21 1.1E-25 157.3 13.4 110 55-164 17-156 (178)
67 3ul3_B Thioredoxin, thioredoxi 99.9 9.8E-22 3.3E-26 154.2 9.8 98 61-158 30-127 (128)
68 2vlu_A Thioredoxin, thioredoxi 99.9 8.3E-21 2.8E-25 147.6 15.0 104 56-161 13-120 (122)
69 3qou_A Protein YBBN; thioredox 99.9 3.4E-21 1.2E-25 172.8 14.5 106 55-160 6-113 (287)
70 3m9j_A Thioredoxin; oxidoreduc 99.9 8.1E-21 2.8E-25 143.4 14.3 97 62-160 7-105 (105)
71 3dxb_A Thioredoxin N-terminall 99.9 5E-21 1.7E-25 164.9 14.8 112 52-163 8-120 (222)
72 3emx_A Thioredoxin; structural 99.9 2.4E-21 8.1E-26 153.5 11.4 106 55-164 15-129 (135)
73 2xc2_A Thioredoxinn; oxidoredu 99.9 8E-21 2.7E-25 146.5 13.5 101 57-160 14-117 (117)
74 2djj_A PDI, protein disulfide- 99.9 1.4E-21 4.8E-26 151.7 9.2 107 54-163 5-119 (121)
75 2l57_A Uncharacterized protein 99.9 4.2E-21 1.4E-25 150.2 11.7 106 59-164 7-120 (126)
76 1faa_A Thioredoxin F; electron 99.9 2E-20 6.7E-25 145.9 15.4 104 55-160 17-123 (124)
77 2wz9_A Glutaredoxin-3; protein 99.9 1.4E-20 4.9E-25 152.3 15.1 105 56-162 12-119 (153)
78 1oaz_A Thioredoxin 1; immune s 99.9 1.1E-21 3.7E-26 152.7 8.1 105 56-160 3-122 (123)
79 1xfl_A Thioredoxin H1; AT3G510 99.9 1.6E-20 5.4E-25 146.4 14.7 105 54-160 14-123 (124)
80 2vim_A Thioredoxin, TRX; thior 99.8 2.1E-20 7.3E-25 140.7 14.7 100 59-160 2-104 (104)
81 2es7_A Q8ZP25_salty, putative 99.8 1.7E-21 5.8E-26 154.9 8.9 111 57-168 18-132 (142)
82 2l6c_A Thioredoxin; oxidoreduc 99.8 5.5E-21 1.9E-25 145.7 11.4 102 58-161 5-106 (110)
83 2oe3_A Thioredoxin-3; electron 99.8 1.1E-20 3.6E-25 145.1 12.7 100 57-158 13-113 (114)
84 1zma_A Bacterocin transport ac 99.8 3.6E-21 1.2E-25 148.7 9.8 102 56-157 12-117 (118)
85 2dj3_A Protein disulfide-isome 99.8 2.4E-21 8.2E-26 153.0 7.0 111 54-164 5-121 (133)
86 2j23_A Thioredoxin; immune pro 99.8 2.4E-20 8.3E-25 144.7 12.5 104 56-160 15-120 (121)
87 3evi_A Phosducin-like protein 99.8 2.5E-20 8.6E-25 142.9 12.3 99 56-158 3-111 (118)
88 2dj0_A Thioredoxin-related tra 99.8 1.2E-21 4.1E-26 155.7 4.7 104 56-159 7-119 (137)
89 3d22_A TRXH4, thioredoxin H-ty 99.8 6.9E-20 2.4E-24 145.8 15.0 108 54-163 22-134 (139)
90 1qgv_A Spliceosomal protein U5 99.8 2.2E-20 7.4E-25 149.0 11.7 99 62-160 10-120 (142)
91 2vm1_A Thioredoxin, thioredoxi 99.8 1E-19 3.5E-24 140.4 14.5 105 56-162 6-115 (118)
92 2f51_A Thioredoxin; electron t 99.8 7.5E-20 2.6E-24 141.2 13.5 104 57-162 4-114 (118)
93 1ti3_A Thioredoxin H, PTTRXH1; 99.8 6.8E-20 2.3E-24 140.2 12.4 103 56-160 4-111 (113)
94 3cxg_A Putative thioredoxin; m 99.8 4E-20 1.4E-24 145.9 11.3 106 54-162 18-130 (133)
95 3idv_A Protein disulfide-isome 99.8 1.5E-19 5.1E-24 157.7 14.0 109 55-164 129-240 (241)
96 2dbc_A PDCL2, unnamed protein 99.8 2.6E-19 9E-24 141.5 12.7 102 55-160 9-120 (135)
97 2kuc_A Putative disulphide-iso 99.8 1.9E-19 6.4E-24 141.5 11.3 106 58-163 8-123 (130)
98 1a8l_A Protein disulfide oxido 99.8 7.4E-19 2.5E-23 151.8 13.8 103 58-160 118-225 (226)
99 2yj7_A LPBCA thioredoxin; oxid 99.7 7.2E-21 2.5E-25 143.7 0.0 103 57-159 2-105 (106)
100 3fk8_A Disulphide isomerase; A 99.8 6E-19 2E-23 139.2 10.8 93 68-160 24-132 (133)
101 2c0g_A ERP29 homolog, windbeut 99.8 2.6E-18 8.7E-23 148.5 14.7 120 54-178 14-149 (248)
102 2fwh_A Thiol:disulfide interch 99.8 1.1E-18 3.8E-23 137.8 10.1 98 62-160 18-127 (134)
103 3f8u_A Protein disulfide-isome 99.8 1.8E-18 6E-23 166.4 13.5 117 49-166 345-466 (481)
104 3f9u_A Putative exported cytoc 99.8 1.5E-18 5.3E-23 143.2 8.8 101 60-160 30-165 (172)
105 1lu4_A Soluble secreted antige 99.8 5.7E-18 2E-22 133.8 11.3 104 55-160 6-135 (136)
106 1fo5_A Thioredoxin; disulfide 99.7 1.9E-18 6.7E-23 124.9 7.6 83 74-160 3-85 (85)
107 1a0r_P Phosducin, MEKA, PP33; 99.7 3.8E-18 1.3E-22 147.3 10.6 105 54-160 110-225 (245)
108 2trc_P Phosducin, MEKA, PP33; 99.7 1.5E-18 5.1E-23 148.0 7.7 103 55-159 98-211 (217)
109 2b5x_A YKUV protein, TRXY; thi 99.7 2.3E-17 7.9E-22 132.2 14.2 103 59-161 15-145 (148)
110 1zzo_A RV1677; thioredoxin fol 99.7 1.1E-17 3.8E-22 132.0 12.1 105 55-161 7-135 (136)
111 1nho_A Probable thioredoxin; b 99.7 2.2E-18 7.6E-23 124.5 7.4 82 75-160 3-84 (85)
112 2qc7_A ERP31, ERP28, endoplasm 99.7 1.3E-17 4.5E-22 143.7 13.0 101 56-160 5-118 (240)
113 2djk_A PDI, protein disulfide- 99.7 8.1E-18 2.8E-22 132.6 10.6 106 57-164 7-118 (133)
114 1wmj_A Thioredoxin H-type; str 99.7 2.9E-19 1E-23 140.3 2.1 107 55-163 13-124 (130)
115 1wou_A Thioredoxin -related pr 99.7 6.3E-18 2.2E-22 131.4 9.5 101 57-158 6-122 (123)
116 2ju5_A Thioredoxin disulfide i 99.7 1.3E-17 4.4E-22 135.0 11.3 96 65-161 39-152 (154)
117 3iv4_A Putative oxidoreductase 99.7 1.1E-17 3.8E-22 124.3 9.9 98 57-156 7-111 (112)
118 3dml_A Putative uncharacterize 99.7 3E-18 1E-22 129.4 6.1 90 72-161 17-110 (116)
119 3or5_A Thiol:disulfide interch 99.7 4.1E-17 1.4E-21 133.5 13.1 107 55-161 16-151 (165)
120 2b5e_A Protein disulfide-isome 99.7 1.8E-17 6.3E-22 160.2 12.0 112 51-164 353-470 (504)
121 4f9z_D Endoplasmic reticulum r 99.7 1.2E-15 4.1E-20 131.6 21.6 197 57-263 10-223 (227)
122 3qcp_A QSOX from trypanosoma b 99.7 1.5E-18 5.3E-23 162.1 3.6 96 55-150 22-129 (470)
123 2lst_A Thioredoxin; structural 99.6 5.1E-19 1.7E-23 139.0 0.0 99 63-161 9-116 (130)
124 3raz_A Thioredoxin-related pro 99.7 5.1E-17 1.8E-21 131.0 11.9 93 71-163 22-142 (151)
125 2f9s_A Thiol-disulfide oxidore 99.7 5.9E-17 2E-21 130.5 11.7 106 58-163 11-140 (151)
126 2ywm_A Glutaredoxin-like prote 99.7 4.4E-17 1.5E-21 140.9 11.5 101 57-161 119-220 (229)
127 3lor_A Thiol-disulfide isomera 99.7 1.3E-16 4.5E-21 129.7 13.5 106 57-162 13-156 (160)
128 3eyt_A Uncharacterized protein 99.7 9.8E-17 3.4E-21 130.3 12.7 99 64-162 19-153 (158)
129 3kp8_A Vkorc1/thioredoxin doma 99.7 7.5E-18 2.6E-22 126.9 5.5 75 72-157 11-91 (106)
130 2h30_A Thioredoxin, peptide me 99.7 5.7E-17 1.9E-21 132.5 11.1 105 57-161 22-156 (164)
131 1sen_A Thioredoxin-like protei 99.7 9.5E-18 3.3E-22 137.1 4.6 98 64-161 37-148 (164)
132 3erw_A Sporulation thiol-disul 99.7 5.9E-17 2E-21 129.4 8.9 99 57-156 19-144 (145)
133 2hls_A Protein disulfide oxido 99.7 2.7E-16 9.1E-21 136.9 13.6 99 60-162 124-227 (243)
134 2lja_A Putative thiol-disulfid 99.7 1E-16 3.5E-21 129.2 10.0 107 57-163 14-145 (152)
135 4evm_A Thioredoxin family prot 99.7 1.6E-16 5.5E-21 125.4 10.9 102 58-159 7-137 (138)
136 3ia1_A THIO-disulfide isomeras 99.7 1.8E-16 6.3E-21 128.0 11.1 106 56-164 14-147 (154)
137 3hcz_A Possible thiol-disulfid 99.7 1E-16 3.6E-21 128.4 9.2 104 57-160 15-145 (148)
138 2l5o_A Putative thioredoxin; s 99.7 2.9E-16 9.8E-21 126.7 11.4 107 57-163 12-143 (153)
139 2lrt_A Uncharacterized protein 99.7 5E-16 1.7E-20 125.3 12.2 102 56-157 18-144 (152)
140 3eur_A Uncharacterized protein 99.7 3.7E-16 1.3E-20 124.5 10.7 99 56-157 14-141 (142)
141 3ewl_A Uncharacterized conserv 99.7 2.5E-16 8.4E-21 125.5 9.4 101 57-160 11-140 (142)
142 3gl3_A Putative thiol:disulfid 99.7 8.2E-16 2.8E-20 123.9 12.6 92 71-162 26-143 (152)
143 2lrn_A Thiol:disulfide interch 99.7 3.5E-16 1.2E-20 126.2 10.4 101 58-161 14-141 (152)
144 3lwa_A Secreted thiol-disulfid 99.7 6.2E-16 2.1E-20 128.8 11.8 106 56-161 40-181 (183)
145 1ilo_A Conserved hypothetical 99.7 4.1E-16 1.4E-20 110.3 9.2 74 76-156 2-76 (77)
146 3fkf_A Thiol-disulfide oxidore 99.7 3.7E-16 1.3E-20 125.2 9.9 101 57-160 15-145 (148)
147 3ira_A Conserved protein; meth 99.7 1.8E-16 6E-21 129.3 7.6 83 60-142 26-120 (173)
148 2b1k_A Thiol:disulfide interch 99.7 5.3E-16 1.8E-20 127.3 10.6 103 55-160 30-159 (168)
149 1z6n_A Hypothetical protein PA 99.7 2.2E-16 7.5E-21 128.7 8.2 96 60-158 40-140 (167)
150 3hdc_A Thioredoxin family prot 99.6 9.6E-16 3.3E-20 124.5 11.4 105 56-160 24-151 (158)
151 3ph9_A Anterior gradient prote 99.6 3.7E-16 1.3E-20 124.9 8.1 95 65-160 36-144 (151)
152 1kng_A Thiol:disulfide interch 99.6 7.7E-16 2.6E-20 124.6 10.1 95 64-160 33-151 (156)
153 3kcm_A Thioredoxin family prot 99.6 9.6E-16 3.3E-20 123.7 10.5 104 57-160 12-142 (154)
154 3ha9_A Uncharacterized thiored 99.6 1.1E-15 3.6E-20 125.1 10.7 101 57-160 21-163 (165)
155 3kh7_A Thiol:disulfide interch 99.6 1.5E-15 5E-20 125.7 11.4 103 56-161 39-167 (176)
156 3bj5_A Protein disulfide-isome 99.6 2.2E-16 7.5E-21 125.9 5.2 104 260-364 8-146 (147)
157 3fw2_A Thiol-disulfide oxidore 99.6 3.1E-15 1.1E-19 120.3 11.8 101 57-160 15-147 (150)
158 1jfu_A Thiol:disulfide interch 99.6 4.4E-15 1.5E-19 123.9 12.3 108 56-163 43-182 (186)
159 2ywi_A Hypothetical conserved 99.6 5.6E-15 1.9E-19 124.4 11.6 107 57-163 28-176 (196)
160 4fo5_A Thioredoxin-like protei 99.6 3.1E-15 1.1E-19 119.2 9.2 95 60-157 19-141 (143)
161 1i5g_A Tryparedoxin II; electr 99.6 5.2E-15 1.8E-19 118.1 10.4 87 57-143 12-126 (144)
162 2hyx_A Protein DIPZ; thioredox 99.6 7.3E-15 2.5E-19 133.9 12.4 103 58-160 67-198 (352)
163 2cvb_A Probable thiol-disulfid 99.6 6.2E-15 2.1E-19 123.2 10.9 107 57-163 17-161 (188)
164 3s9f_A Tryparedoxin; thioredox 99.6 5.2E-15 1.8E-19 121.0 9.1 87 57-144 33-147 (165)
165 1o8x_A Tryparedoxin, TRYX, TXN 99.6 5.9E-15 2E-19 118.0 9.1 86 57-143 13-126 (146)
166 2fgx_A Putative thioredoxin; N 99.6 8.9E-15 3E-19 108.9 8.7 78 74-156 29-106 (107)
167 1o73_A Tryparedoxin; electron 99.6 1.2E-14 4.2E-19 115.8 9.5 73 71-143 26-126 (144)
168 1ttz_A Conserved hypothetical 99.6 7.5E-15 2.6E-19 105.6 7.0 74 77-160 3-76 (87)
169 2ggt_A SCO1 protein homolog, m 99.5 1.7E-14 5.9E-19 117.6 9.6 104 58-161 8-161 (164)
170 2rli_A SCO2 protein homolog, m 99.5 2E-14 6.7E-19 118.2 9.7 105 57-161 10-164 (171)
171 3u5r_E Uncharacterized protein 99.5 4E-14 1.4E-18 121.2 11.9 109 55-163 40-189 (218)
172 2vup_A Glutathione peroxidase- 99.5 4.1E-14 1.4E-18 118.5 11.4 107 55-161 30-185 (190)
173 1sji_A Calsequestrin 2, calseq 99.5 8E-13 2.7E-17 121.5 21.1 198 56-263 123-344 (350)
174 3drn_A Peroxiredoxin, bacterio 99.5 5.3E-14 1.8E-18 114.5 11.6 90 57-146 12-130 (161)
175 3cmi_A Peroxiredoxin HYR1; thi 99.5 1.6E-14 5.5E-19 118.8 8.3 104 57-161 16-168 (171)
176 3dwv_A Glutathione peroxidase- 99.5 5.9E-14 2E-18 117.2 10.7 109 53-161 26-183 (187)
177 2v1m_A Glutathione peroxidase; 99.5 4.5E-14 1.5E-18 115.7 9.9 105 57-161 15-167 (169)
178 2p5q_A Glutathione peroxidase 99.5 3.8E-14 1.3E-18 116.3 8.7 105 57-161 16-168 (170)
179 2f8a_A Glutathione peroxidase 99.5 6.2E-14 2.1E-18 118.9 9.4 103 58-160 31-206 (208)
180 2ls5_A Uncharacterized protein 99.2 1.9E-15 6.6E-20 122.7 0.0 103 57-160 17-147 (159)
181 3us3_A Calsequestrin-1; calciu 99.5 2.2E-12 7.4E-17 119.3 20.0 198 56-263 125-346 (367)
182 2k6v_A Putative cytochrome C o 99.5 3.4E-14 1.2E-18 116.8 6.6 89 71-159 33-171 (172)
183 2h8l_A Protein disulfide-isome 99.5 3.2E-12 1.1E-16 111.9 19.2 196 57-263 7-228 (252)
184 3kij_A Probable glutathione pe 99.5 1.5E-13 5E-18 114.0 10.0 107 54-160 19-169 (180)
185 2p31_A CL683, glutathione pero 99.5 5.3E-14 1.8E-18 116.8 7.3 105 56-160 32-180 (181)
186 2l4c_A Endoplasmic reticulum r 99.5 2.9E-13 9.8E-18 104.2 10.1 104 158-265 15-124 (124)
187 2lus_A Thioredoxion; CR-Trp16, 99.2 5.5E-15 1.9E-19 117.6 0.0 86 57-142 8-124 (143)
188 1xvw_A Hypothetical protein RV 99.5 2E-13 6.7E-18 110.9 9.1 102 57-158 19-157 (160)
189 2obi_A PHGPX, GPX-4, phospholi 99.5 1.4E-13 4.7E-18 114.5 8.2 104 56-159 30-182 (183)
190 2gs3_A PHGPX, GPX-4, phospholi 99.4 1.7E-13 5.8E-18 114.2 8.3 103 57-159 33-184 (185)
191 1we0_A Alkyl hydroperoxide red 99.4 1.5E-13 5.1E-18 114.7 7.8 89 72-160 30-156 (187)
192 2dlx_A UBX domain-containing p 99.4 5E-13 1.7E-17 106.8 10.4 89 71-160 40-135 (153)
193 1zof_A Alkyl hydroperoxide-red 99.4 1.7E-13 5.8E-18 115.5 7.9 89 72-160 32-160 (198)
194 2bmx_A Alkyl hydroperoxidase C 99.4 3.4E-13 1.2E-17 113.3 9.3 90 72-161 44-170 (195)
195 3ec3_A Protein disulfide-isome 99.4 4.4E-11 1.5E-15 104.4 21.2 196 57-263 7-226 (250)
196 2e7p_A Glutaredoxin; thioredox 99.4 1.3E-13 4.3E-18 105.6 3.8 87 65-159 12-106 (116)
197 2i3y_A Epididymal secretory gl 99.4 2.6E-12 8.9E-17 109.1 11.6 108 53-161 35-211 (215)
198 3kp9_A Vkorc1/thioredoxin doma 99.4 3.9E-13 1.3E-17 118.3 6.7 80 65-157 191-276 (291)
199 2jsy_A Probable thiol peroxida 99.4 3.3E-12 1.1E-16 104.4 11.9 104 56-160 27-166 (167)
200 1qmv_A Human thioredoxin perox 99.4 1.6E-12 5.6E-17 109.3 10.3 90 71-160 32-162 (197)
201 1nm3_A Protein HI0572; hybrid, 99.4 1.9E-11 6.4E-16 106.2 16.1 144 72-236 32-225 (241)
202 2b7k_A SCO1 protein; metalloch 99.4 2E-12 6.9E-17 109.0 9.5 106 56-161 24-179 (200)
203 1xzo_A BSSCO, hypothetical pro 99.4 4E-12 1.4E-16 104.6 10.9 105 57-161 17-172 (174)
204 1zye_A Thioredoxin-dependent p 99.3 1.6E-12 5.6E-17 111.2 8.1 89 72-160 55-184 (220)
205 1uul_A Tryparedoxin peroxidase 99.3 2.6E-12 9.1E-17 108.5 9.1 89 72-160 35-164 (202)
206 2h01_A 2-Cys peroxiredoxin; th 99.3 2.4E-12 8.2E-17 107.8 8.5 89 72-160 30-158 (192)
207 2i81_A 2-Cys peroxiredoxin; st 99.3 4E-12 1.4E-16 108.2 9.9 89 72-160 51-179 (213)
208 3gkn_A Bacterioferritin comigr 99.3 4.9E-12 1.7E-16 102.9 9.5 102 58-159 20-160 (163)
209 2r37_A Glutathione peroxidase 99.3 6.1E-12 2.1E-16 106.3 10.1 104 56-160 20-192 (207)
210 1wjk_A C330018D20RIK protein; 99.3 3.6E-12 1.2E-16 94.5 7.7 80 72-160 14-95 (100)
211 3ztl_A Thioredoxin peroxidase; 99.3 7.9E-12 2.7E-16 107.1 10.6 89 71-159 67-196 (222)
212 1xvq_A Thiol peroxidase; thior 99.3 5.7E-12 2E-16 103.8 8.5 101 57-159 28-163 (175)
213 1hyu_A AHPF, alkyl hydroperoxi 99.3 2.2E-11 7.5E-16 117.8 13.0 96 59-159 102-198 (521)
214 2k8s_A Thioredoxin; dimer, str 99.3 2.1E-12 7.1E-17 91.7 4.2 62 77-140 4-66 (80)
215 4g2e_A Peroxiredoxin; redox pr 99.3 2.7E-12 9.4E-17 103.8 5.3 102 57-158 14-155 (157)
216 2r2j_A Thioredoxin domain-cont 99.3 2.9E-10 9.8E-15 105.7 19.6 194 57-263 119-327 (382)
217 2djk_A PDI, protein disulfide- 99.3 2.6E-12 8.9E-17 100.8 3.9 70 288-360 56-130 (133)
218 1ego_A Glutaredoxin; electron 99.2 2.9E-11 9.9E-16 86.7 8.4 75 77-160 3-83 (85)
219 3ixr_A Bacterioferritin comigr 99.2 4.2E-11 1.4E-15 99.0 10.5 107 53-159 31-176 (179)
220 2c0d_A Thioredoxin peroxidase 99.2 2.4E-11 8.1E-16 103.8 9.1 104 57-160 35-183 (221)
221 2a4v_A Peroxiredoxin DOT5; yea 99.2 4.5E-11 1.5E-15 96.8 10.1 96 57-154 17-144 (159)
222 1n8j_A AHPC, alkyl hydroperoxi 99.2 6.7E-11 2.3E-15 98.4 11.0 89 72-160 29-155 (186)
223 3me7_A Putative uncharacterize 99.2 7E-11 2.4E-15 96.8 10.9 107 57-163 12-164 (170)
224 1psq_A Probable thiol peroxida 99.2 6.1E-11 2.1E-15 96.4 10.4 101 57-158 26-162 (163)
225 3ed3_A Protein disulfide-isome 99.2 2E-10 6.8E-15 102.8 14.1 179 162-347 17-267 (298)
226 4gqc_A Thiol peroxidase, perox 99.2 1.1E-11 3.7E-16 101.0 5.1 105 57-161 15-160 (164)
227 2pn8_A Peroxiredoxin-4; thiore 99.2 5E-11 1.7E-15 101.2 8.8 89 72-160 47-176 (211)
228 3qpm_A Peroxiredoxin; oxidored 99.2 8.1E-11 2.8E-15 101.8 9.3 89 71-159 75-204 (240)
229 1eej_A Thiol:disulfide interch 99.2 9E-11 3.1E-15 100.0 9.0 82 72-160 85-210 (216)
230 2yzh_A Probable thiol peroxida 99.1 9.6E-11 3.3E-15 96.0 8.1 101 57-159 31-170 (171)
231 3gyk_A 27KDA outer membrane pr 99.1 2.6E-10 8.9E-15 93.8 10.5 83 72-160 21-172 (175)
232 3p7x_A Probable thiol peroxida 99.1 1.9E-10 6.4E-15 93.8 9.1 100 57-158 30-165 (166)
233 1q98_A Thiol peroxidase, TPX; 99.1 2E-10 6.8E-15 93.6 9.1 88 57-145 27-148 (165)
234 3uma_A Hypothetical peroxiredo 99.1 3.8E-10 1.3E-14 93.4 9.7 91 56-146 35-167 (184)
235 2wfc_A Peroxiredoxin 5, PRDX5; 99.1 3.5E-10 1.2E-14 92.1 9.4 75 72-146 30-142 (167)
236 3a2v_A Probable peroxiredoxin; 99.1 3.5E-10 1.2E-14 97.8 9.7 94 67-160 27-161 (249)
237 1tp9_A Peroxiredoxin, PRX D (t 99.1 3.2E-10 1.1E-14 92.0 8.7 75 72-146 34-146 (162)
238 3tjj_A Peroxiredoxin-4; thiore 99.1 1.7E-10 6E-15 100.4 7.3 89 71-159 89-218 (254)
239 4hde_A SCO1/SENC family lipopr 99.1 1.1E-09 3.8E-14 89.5 11.3 107 54-160 13-169 (170)
240 3zrd_A Thiol peroxidase; oxido 99.0 8.6E-10 2.9E-14 92.7 10.2 89 56-145 61-183 (200)
241 1t3b_A Thiol:disulfide interch 99.0 4.7E-10 1.6E-14 95.1 8.5 80 72-158 85-208 (211)
242 3mng_A Peroxiredoxin-5, mitoch 99.0 7.3E-10 2.5E-14 90.7 9.3 97 60-156 29-170 (173)
243 3zzx_A Thioredoxin; oxidoreduc 99.0 1.6E-09 5.6E-14 80.8 9.4 96 164-264 2-105 (105)
244 2pwj_A Mitochondrial peroxired 99.0 1.6E-09 5.5E-14 88.6 9.9 75 72-146 42-154 (171)
245 3h93_A Thiol:disulfide interch 99.0 2E-09 6.9E-14 89.9 9.5 87 72-160 24-183 (192)
246 1prx_A HORF6; peroxiredoxin, h 98.9 7.5E-09 2.6E-13 88.4 11.9 86 75-160 34-168 (224)
247 1h75_A Glutaredoxin-like prote 98.9 1.2E-09 4.2E-14 77.3 5.7 70 77-158 3-75 (81)
248 1v58_A Thiol:disulfide interch 98.9 4.9E-09 1.7E-13 90.7 10.1 85 73-160 97-232 (241)
249 1r7h_A NRDH-redoxin; thioredox 98.9 7.1E-09 2.4E-13 72.1 9.0 68 77-156 3-73 (75)
250 1kte_A Thioltransferase; redox 98.9 1.3E-09 4.3E-14 81.5 5.3 72 65-143 4-82 (105)
251 3hd5_A Thiol:disulfide interch 98.9 5.5E-09 1.9E-13 87.4 9.3 43 72-114 24-66 (195)
252 2l4c_A Endoplasmic reticulum r 98.9 3.2E-08 1.1E-12 75.8 12.8 95 57-159 22-122 (124)
253 1xcc_A 1-Cys peroxiredoxin; un 98.9 5.6E-09 1.9E-13 89.0 9.0 89 72-160 29-165 (220)
254 2v2g_A Peroxiredoxin 6; oxidor 98.9 8E-09 2.7E-13 88.6 9.7 88 73-160 28-164 (233)
255 2qc7_A ERP31, ERP28, endoplasm 98.8 2.6E-08 9.1E-13 85.5 11.2 97 163-264 6-118 (240)
256 3h79_A Thioredoxin-like protei 98.8 5.9E-08 2E-12 74.9 11.6 98 162-263 15-126 (127)
257 2cq9_A GLRX2 protein, glutared 98.8 5.9E-09 2E-13 81.0 5.8 87 63-159 17-113 (130)
258 2hze_A Glutaredoxin-1; thiored 98.8 2.4E-09 8.3E-14 81.2 3.1 63 76-143 20-89 (114)
259 3keb_A Probable thiol peroxida 98.8 5.1E-08 1.7E-12 82.4 10.8 100 57-160 32-175 (224)
260 2ht9_A Glutaredoxin-2; thiored 98.7 8.3E-09 2.9E-13 81.7 4.8 86 63-158 39-134 (146)
261 2c0g_A ERP29 homolog, windbeut 98.7 6.7E-08 2.3E-12 83.3 10.6 97 162-264 16-131 (248)
262 3hz8_A Thiol:disulfide interch 98.6 1.4E-07 4.9E-12 78.6 10.3 42 72-113 23-64 (193)
263 2qgv_A Hydrogenase-1 operon pr 98.6 2E-07 6.7E-12 72.4 9.8 104 156-264 11-124 (140)
264 4euy_A Uncharacterized protein 98.6 4.1E-08 1.4E-12 73.1 5.6 95 165-263 3-103 (105)
265 3qfa_C Thioredoxin; protein-pr 98.6 3.1E-07 1E-11 69.7 10.5 97 162-263 11-115 (116)
266 2av4_A Thioredoxin-like protei 98.6 1.7E-07 5.7E-12 73.8 8.9 97 164-263 23-137 (160)
267 2dml_A Protein disulfide-isome 98.6 5.8E-07 2E-11 69.5 11.6 97 163-263 18-122 (130)
268 3sbc_A Peroxiredoxin TSA1; alp 98.6 1.8E-07 6.1E-12 78.5 9.0 88 72-159 51-179 (216)
269 3gnj_A Thioredoxin domain prot 98.6 4.1E-07 1.4E-11 68.1 10.2 96 163-263 5-108 (111)
270 2znm_A Thiol:disulfide interch 98.6 1.4E-07 4.7E-12 78.7 8.2 85 72-160 21-179 (195)
271 2qsi_A Putative hydrogenase ex 98.6 2.6E-07 8.9E-12 71.4 8.7 94 165-263 18-121 (137)
272 3m9j_A Thioredoxin; oxidoreduc 98.6 3.3E-07 1.1E-11 67.9 9.1 95 164-263 2-104 (105)
273 3c1r_A Glutaredoxin-1; oxidize 98.5 5.5E-08 1.9E-12 74.1 4.5 71 64-141 16-94 (118)
274 3q6o_A Sulfhydryl oxidase 1; p 98.5 4.4E-07 1.5E-11 78.6 10.5 177 162-345 12-238 (244)
275 1ep7_A Thioredoxin CH1, H-type 98.5 3.9E-07 1.3E-11 68.4 8.9 97 162-263 2-109 (112)
276 3ic4_A Glutaredoxin (GRX-1); s 98.5 2.5E-07 8.4E-12 67.0 7.4 69 77-157 14-91 (92)
277 2oe3_A Thioredoxin-3; electron 98.5 5.6E-07 1.9E-11 68.0 9.6 96 162-262 12-113 (114)
278 3ga4_A Dolichyl-diphosphooligo 98.5 1.9E-07 6.6E-12 75.9 7.4 113 160-276 16-164 (178)
279 1gh2_A Thioredoxin-like protei 98.5 4.2E-07 1.4E-11 67.7 8.6 96 163-263 2-105 (107)
280 1z6m_A Conserved hypothetical 98.5 6.3E-07 2.1E-11 73.3 10.4 81 72-157 26-174 (175)
281 3gv1_A Disulfide interchange p 98.5 1.8E-07 6.3E-12 73.9 6.9 81 72-161 13-139 (147)
282 1r26_A Thioredoxin; redox-acti 98.5 5.5E-07 1.9E-11 69.3 9.5 95 164-263 21-121 (125)
283 3uvt_A Thioredoxin domain-cont 98.5 6.1E-07 2.1E-11 67.1 9.6 96 162-263 5-110 (111)
284 3l9v_A Putative thiol-disulfid 98.5 2E-07 6.8E-12 77.4 7.3 41 73-113 14-57 (189)
285 2voc_A Thioredoxin; electron t 98.5 5E-07 1.7E-11 68.0 8.8 97 164-266 3-106 (112)
286 3feu_A Putative lipoprotein; a 98.5 2.9E-07 9.8E-12 76.1 8.0 84 73-160 22-183 (185)
287 3f3q_A Thioredoxin-1; His TAG, 98.5 8.5E-07 2.9E-11 66.3 9.9 95 164-263 8-108 (109)
288 4dvc_A Thiol:disulfide interch 98.5 7.6E-07 2.6E-11 73.3 10.4 87 72-160 20-181 (184)
289 1xwb_A Thioredoxin; dimerizati 98.5 9.6E-07 3.3E-11 65.4 10.0 95 164-263 2-105 (106)
290 2vim_A Thioredoxin, TRX; thior 98.5 7.5E-07 2.6E-11 65.7 9.4 94 165-263 2-103 (104)
291 3tco_A Thioredoxin (TRXA-1); d 98.5 5.6E-07 1.9E-11 67.0 8.5 96 163-263 5-107 (109)
292 4eo3_A Bacterioferritin comigr 98.5 4.8E-07 1.7E-11 81.4 9.6 102 56-160 7-138 (322)
293 2wz9_A Glutaredoxin-3; protein 98.5 5.8E-07 2E-11 71.8 9.1 99 161-264 11-117 (153)
294 2j23_A Thioredoxin; immune pro 98.5 1E-06 3.5E-11 67.3 9.9 97 162-263 15-119 (121)
295 1syr_A Thioredoxin; SGPP, stru 98.5 9.7E-07 3.3E-11 66.3 9.5 97 162-263 8-110 (112)
296 2yan_A Glutaredoxin-3; oxidore 98.5 4.6E-07 1.6E-11 67.4 7.5 68 64-141 8-84 (105)
297 2dj1_A Protein disulfide-isome 98.5 4.8E-07 1.6E-11 71.0 8.0 100 163-268 18-127 (140)
298 1mek_A Protein disulfide isome 98.5 1E-06 3.5E-11 66.7 9.7 100 163-266 8-118 (120)
299 2klx_A Glutaredoxin; thioredox 98.5 2.2E-07 7.4E-12 66.9 5.4 56 76-139 7-65 (89)
300 2i4a_A Thioredoxin; acidophIle 98.4 1E-06 3.5E-11 65.4 9.3 96 163-263 3-106 (107)
301 2lqo_A Putative glutaredoxin R 98.4 7.6E-07 2.6E-11 64.1 8.1 75 77-162 6-85 (92)
302 2rem_A Disulfide oxidoreductas 98.4 1.7E-06 5.8E-11 71.9 11.4 42 72-113 24-65 (193)
303 3die_A Thioredoxin, TRX; elect 98.4 9.5E-07 3.2E-11 65.4 8.9 95 163-263 4-105 (106)
304 2l6c_A Thioredoxin; oxidoreduc 98.4 1.5E-06 5.1E-11 65.1 9.8 96 165-265 5-106 (110)
305 3p2a_A Thioredoxin 2, putative 98.4 1E-06 3.4E-11 69.9 9.3 97 162-263 38-141 (148)
306 1thx_A Thioredoxin, thioredoxi 98.4 1.7E-06 5.9E-11 65.0 10.2 99 160-263 5-111 (115)
307 1un2_A DSBA, thiol-disulfide i 98.4 8.6E-08 2.9E-12 80.0 3.0 45 72-116 112-159 (197)
308 1fov_A Glutaredoxin 3, GRX3; a 98.4 1E-06 3.4E-11 62.1 8.2 67 77-157 3-73 (82)
309 3d6i_A Monothiol glutaredoxin- 98.4 2E-06 6.7E-11 64.5 10.3 95 164-263 2-107 (112)
310 3apq_A DNAJ homolog subfamily 98.4 8.7E-07 3E-11 74.8 9.2 105 163-272 98-209 (210)
311 3hxs_A Thioredoxin, TRXP; elec 98.4 3.4E-06 1.2E-10 66.1 11.7 98 161-263 21-137 (141)
312 2trx_A Thioredoxin; electron t 98.4 1.5E-06 5.2E-11 64.6 9.2 96 163-263 3-106 (108)
313 3iv4_A Putative oxidoreductase 98.4 5.8E-07 2E-11 66.6 6.6 96 162-260 6-111 (112)
314 4f82_A Thioredoxin reductase; 98.4 1.7E-06 5.8E-11 70.2 9.9 80 66-146 41-158 (176)
315 2ppt_A Thioredoxin-2; thiredox 98.4 1.4E-06 4.8E-11 69.7 9.4 97 162-263 47-150 (155)
316 3hz4_A Thioredoxin; NYSGXRC, P 98.4 8E-07 2.7E-11 69.8 7.8 97 162-263 6-110 (140)
317 3nzn_A Glutaredoxin; structura 98.4 1.4E-06 4.6E-11 64.5 8.5 72 74-156 21-101 (103)
318 1oaz_A Thioredoxin 1; immune s 98.4 8.9E-07 3E-11 67.9 7.8 96 163-263 4-121 (123)
319 3aps_A DNAJ homolog subfamily 98.4 1.2E-06 4.1E-11 66.8 8.4 97 162-263 3-111 (122)
320 2es7_A Q8ZP25_salty, putative 98.4 1.2E-06 4.2E-11 68.9 8.6 104 163-272 18-132 (142)
321 1t00_A Thioredoxin, TRX; redox 98.4 1.4E-06 4.7E-11 65.3 8.5 98 162-263 5-109 (112)
322 3qmx_A Glutaredoxin A, glutare 98.4 1E-06 3.5E-11 64.6 7.5 60 73-140 14-78 (99)
323 2yzu_A Thioredoxin; redox prot 98.4 1.6E-06 5.3E-11 64.5 8.6 95 164-263 3-104 (109)
324 1x5d_A Protein disulfide-isome 98.4 1.5E-06 5.2E-11 67.3 8.8 96 163-263 8-115 (133)
325 1x5e_A Thioredoxin domain cont 98.4 1.4E-06 4.9E-11 66.9 8.5 102 163-272 8-117 (126)
326 1w4v_A Thioredoxin, mitochondr 98.4 1.8E-06 6.3E-11 65.6 8.9 96 164-263 14-117 (119)
327 1xfl_A Thioredoxin H1; AT3G510 98.4 2.5E-06 8.4E-11 65.4 9.6 97 162-263 16-122 (124)
328 3evi_A Phosducin-like protein 98.4 1.2E-06 4.2E-11 66.4 7.7 97 163-264 4-113 (118)
329 2ec4_A FAS-associated factor 1 98.3 4.4E-06 1.5E-10 68.0 11.4 90 71-160 53-167 (178)
330 2i1u_A Thioredoxin, TRX, MPT46 98.3 1.8E-06 6.1E-11 65.7 8.6 99 161-263 11-116 (121)
331 2xc2_A Thioredoxinn; oxidoredu 98.3 1.8E-06 6.1E-11 65.4 8.5 94 164-263 15-116 (117)
332 2e0q_A Thioredoxin; electron t 98.3 2E-06 7E-11 63.2 8.3 91 169-263 5-101 (104)
333 2o8v_B Thioredoxin 1; disulfid 98.3 2E-06 6.8E-11 66.4 8.2 97 162-263 22-126 (128)
334 1dby_A Chloroplast thioredoxin 98.3 3.5E-06 1.2E-10 62.4 9.3 95 164-263 3-105 (107)
335 3gix_A Thioredoxin-like protei 98.3 4.2E-06 1.4E-10 66.4 10.1 96 164-263 5-119 (149)
336 3rhb_A ATGRXC5, glutaredoxin-C 98.3 1.1E-06 3.6E-11 66.4 6.3 67 65-141 11-85 (113)
337 1nsw_A Thioredoxin, TRX; therm 98.3 2.2E-06 7.7E-11 63.3 7.9 94 165-263 3-103 (105)
338 2khp_A Glutaredoxin; thioredox 98.3 1.6E-06 5.5E-11 62.6 6.8 57 76-140 7-67 (92)
339 3t58_A Sulfhydryl oxidase 1; o 98.3 2.8E-06 9.7E-11 81.4 10.4 163 162-330 12-222 (519)
340 1ti3_A Thioredoxin H, PTTRXH1; 98.3 2.4E-06 8.1E-11 64.0 7.9 97 162-263 4-110 (113)
341 2vm1_A Thioredoxin, thioredoxi 98.3 4.2E-06 1.4E-10 63.2 9.3 98 161-263 5-112 (118)
342 3tue_A Tryparedoxin peroxidase 98.3 6.1E-06 2.1E-10 69.3 10.9 88 72-159 55-183 (219)
343 3msz_A Glutaredoxin 1; alpha-b 98.3 1.6E-06 5.4E-11 62.1 6.4 74 76-161 5-87 (89)
344 2vlu_A Thioredoxin, thioredoxi 98.3 4.2E-06 1.4E-10 63.7 9.1 97 162-263 12-118 (122)
345 1zma_A Bacterocin transport ac 98.3 4.2E-06 1.4E-10 63.4 8.9 94 164-262 14-118 (118)
346 1fb6_A Thioredoxin M; electron 98.3 4.9E-06 1.7E-10 61.3 9.0 94 165-263 3-104 (105)
347 3l9s_A Thiol:disulfide interch 98.2 2.1E-06 7.3E-11 71.2 7.6 40 73-112 21-63 (191)
348 1hyu_A AHPF, alkyl hydroperoxi 98.2 3.8E-05 1.3E-09 74.0 17.4 171 73-263 18-198 (521)
349 3bj5_A Protein disulfide-isome 98.2 2.9E-05 9.9E-10 61.3 13.5 108 57-164 15-130 (147)
350 3ul3_B Thioredoxin, thioredoxi 98.2 1.5E-06 5.2E-11 67.0 5.9 89 171-263 33-128 (128)
351 2l5l_A Thioredoxin; structural 98.2 9.5E-06 3.3E-10 63.2 10.6 97 163-264 10-125 (136)
352 2fwh_A Thiol:disulfide interch 98.2 1.5E-05 5E-10 61.9 11.2 100 161-263 10-126 (134)
353 1v98_A Thioredoxin; oxidoreduc 98.2 7E-06 2.4E-10 64.3 8.9 96 163-263 34-136 (140)
354 3h8q_A Thioredoxin reductase 3 98.2 3E-06 1E-10 63.9 6.0 68 64-141 8-82 (114)
355 3qou_A Protein YBBN; thioredox 98.1 8.9E-06 3E-10 72.0 9.4 98 162-264 7-113 (287)
356 3d22_A TRXH4, thioredoxin H-ty 98.1 8.7E-06 3E-10 63.6 8.3 98 161-263 23-130 (139)
357 2l57_A Uncharacterized protein 98.1 1.2E-05 4.1E-10 61.6 8.6 87 176-265 22-117 (126)
358 2djj_A PDI, protein disulfide- 98.1 7.5E-06 2.6E-10 62.1 7.4 97 162-264 7-116 (121)
359 1qgv_A Spliceosomal protein U5 98.1 1.2E-05 3.9E-10 63.3 8.6 96 164-262 5-118 (142)
360 2dbc_A PDCL2, unnamed protein 98.1 1.1E-05 3.8E-10 62.7 8.3 98 162-264 10-120 (135)
361 3dxb_A Thioredoxin N-terminall 98.1 1.2E-05 4E-10 68.5 8.8 96 164-264 14-117 (222)
362 2f51_A Thioredoxin; electron t 98.1 1.4E-05 4.6E-10 60.6 8.2 101 162-266 3-114 (118)
363 2dj0_A Thioredoxin-related tra 98.1 2.3E-06 7.8E-11 66.8 3.8 96 163-263 8-119 (137)
364 3ctg_A Glutaredoxin-2; reduced 98.0 5.4E-06 1.8E-10 63.9 5.6 72 63-141 27-106 (129)
365 2trc_P Phosducin, MEKA, PP33; 98.0 1.1E-05 3.9E-10 68.1 7.8 98 163-264 100-212 (217)
366 2pu9_C TRX-F, thioredoxin F-ty 98.0 2.2E-05 7.7E-10 58.5 8.4 96 162-263 5-109 (111)
367 1wmj_A Thioredoxin H-type; str 98.0 7.4E-06 2.5E-10 63.0 5.7 98 162-264 14-121 (130)
368 2dj3_A Protein disulfide-isome 98.0 5.8E-06 2E-10 64.0 5.0 99 163-265 8-118 (133)
369 1wik_A Thioredoxin-like protei 98.0 1.9E-05 6.3E-10 59.0 7.5 67 64-140 6-81 (109)
370 3emx_A Thioredoxin; structural 98.0 3.2E-05 1.1E-09 60.1 8.7 96 163-266 17-127 (135)
371 3cxg_A Putative thioredoxin; m 98.0 2.5E-05 8.6E-10 60.5 8.1 96 163-263 21-127 (133)
372 1a0r_P Phosducin, MEKA, PP33; 97.9 4.9E-05 1.7E-09 65.3 9.3 98 163-264 113-225 (245)
373 1faa_A Thioredoxin F; electron 97.9 4.2E-05 1.5E-09 58.2 8.0 97 161-263 17-122 (124)
374 3gha_A Disulfide bond formatio 97.9 0.00012 4.2E-09 61.0 10.9 87 72-163 28-194 (202)
375 2yj7_A LPBCA thioredoxin; oxid 97.0 2.4E-06 8.4E-11 63.0 0.0 95 164-263 3-105 (106)
376 3f4s_A Alpha-DSBA1, putative u 97.7 0.00012 3.9E-09 62.3 9.2 94 72-165 38-215 (226)
377 1wou_A Thioredoxin -related pr 97.7 0.00013 4.3E-09 55.6 8.3 93 165-262 7-122 (123)
378 3fk8_A Disulphide isomerase; A 97.7 9.8E-05 3.4E-09 56.9 7.3 91 169-262 14-130 (133)
379 1fo5_A Thioredoxin; disulfide 97.6 0.00024 8.2E-09 49.7 7.6 75 181-263 3-84 (85)
380 2kuc_A Putative disulphide-iso 97.6 0.00013 4.3E-09 56.0 6.5 86 178-266 25-122 (130)
381 3qcp_A QSOX from trypanosoma b 97.5 3.6E-05 1.2E-09 72.1 2.6 97 163-264 24-138 (470)
382 1nho_A Probable thioredoxin; b 97.5 0.00027 9.1E-09 49.5 6.6 73 183-263 4-83 (85)
383 1ilo_A Conserved hypothetical 97.4 0.00081 2.8E-08 46.0 8.2 69 184-260 3-76 (77)
384 1xiy_A Peroxiredoxin, pfaop; a 97.4 0.0012 4.2E-08 53.8 10.4 86 72-157 42-178 (182)
385 3kp8_A Vkorc1/thioredoxin doma 97.4 0.00015 5.3E-09 53.6 4.5 71 181-263 13-93 (106)
386 3l4n_A Monothiol glutaredoxin- 97.4 0.00038 1.3E-08 53.2 6.7 71 64-139 5-80 (127)
387 2wci_A Glutaredoxin-4; redox-a 97.2 0.00039 1.3E-08 53.7 4.8 68 64-140 26-101 (135)
388 1lu4_A Soluble secreted antige 97.1 0.0023 7.9E-08 48.9 8.5 81 179-263 23-134 (136)
389 2h30_A Thioredoxin, peptide me 97.1 0.001 3.5E-08 53.0 6.6 83 179-264 37-155 (164)
390 3zyw_A Glutaredoxin-3; metal b 97.1 0.0013 4.6E-08 48.8 6.6 66 65-140 8-82 (111)
391 3f9u_A Putative exported cytoc 97.1 0.0015 5E-08 52.7 7.5 83 178-263 45-164 (172)
392 3bci_A Disulfide bond protein 97.0 0.0056 1.9E-07 50.0 10.8 39 72-110 10-51 (186)
393 3gn3_A Putative protein-disulf 97.0 0.0033 1.1E-07 51.3 8.9 40 72-111 13-53 (182)
394 2lst_A Thioredoxin; structural 96.0 0.00011 3.8E-09 56.3 0.0 90 171-263 10-114 (130)
395 1aba_A Glutaredoxin; electron 97.0 0.0018 6.2E-08 45.7 6.4 56 77-139 2-75 (87)
396 1zzo_A RV1677; thioredoxin fol 97.0 0.0031 1.1E-07 48.1 8.3 81 179-263 24-133 (136)
397 2b5x_A YKUV protein, TRXY; thi 97.0 0.0025 8.7E-08 49.5 7.8 82 179-263 28-143 (148)
398 3dml_A Putative uncharacterize 96.9 0.0012 4.2E-08 49.3 5.3 79 180-262 18-107 (116)
399 3ipz_A Monothiol glutaredoxin- 96.9 0.0024 8.2E-08 47.3 6.6 66 65-140 10-84 (109)
400 2ju5_A Thioredoxin disulfide i 96.9 0.0026 9E-08 50.3 7.2 81 178-262 45-149 (154)
401 3gmf_A Protein-disulfide isome 96.9 0.01 3.4E-07 49.4 11.0 36 121-161 162-197 (205)
402 2axo_A Hypothetical protein AT 96.8 0.0014 4.8E-08 56.5 5.6 80 74-160 43-142 (270)
403 4evm_A Thioredoxin family prot 96.8 0.0056 1.9E-07 46.6 8.7 81 179-262 21-136 (138)
404 3raz_A Thioredoxin-related pro 96.8 0.0074 2.5E-07 47.2 9.5 81 179-262 23-137 (151)
405 3gx8_A Monothiol glutaredoxin- 96.8 0.0038 1.3E-07 47.2 7.3 66 65-140 8-85 (121)
406 3erw_A Sporulation thiol-disul 96.8 0.0039 1.3E-07 48.2 7.6 80 179-261 33-145 (145)
407 1t1v_A SH3BGRL3, SH3 domain-bi 96.8 0.0026 8.9E-08 45.5 6.0 56 77-140 4-71 (93)
408 1sen_A Thioredoxin-like protei 96.8 0.0051 1.7E-07 49.2 8.2 91 171-262 37-145 (164)
409 2l5o_A Putative thioredoxin; s 96.8 0.0078 2.7E-07 47.0 9.2 81 179-262 27-138 (153)
410 2xhf_A Peroxiredoxin 5; oxidor 96.7 0.0044 1.5E-07 49.9 7.6 75 72-146 41-152 (171)
411 1nm3_A Protein HI0572; hybrid, 96.7 0.0029 9.8E-08 54.2 6.7 58 74-139 169-229 (241)
412 2ct6_A SH3 domain-binding glut 96.7 0.0033 1.1E-07 46.7 6.1 57 76-140 9-83 (111)
413 3ia1_A THIO-disulfide isomeras 96.5 0.0053 1.8E-07 48.1 6.6 79 181-264 31-143 (154)
414 2wem_A Glutaredoxin-related pr 96.4 0.0062 2.1E-07 45.7 6.1 67 65-141 12-88 (118)
415 2lja_A Putative thiol-disulfid 96.4 0.024 8.4E-07 44.1 9.8 81 180-263 30-141 (152)
416 2f9s_A Thiol-disulfide oxidore 96.3 0.011 3.7E-07 46.2 7.5 82 179-263 25-136 (151)
417 1kng_A Thiol:disulfide interch 96.3 0.011 3.8E-07 46.3 7.4 79 180-262 42-149 (156)
418 3ph9_A Anterior gradient prote 96.3 0.0079 2.7E-07 47.3 6.2 77 171-250 35-120 (151)
419 3kzq_A Putative uncharacterize 96.3 0.049 1.7E-06 45.2 11.5 43 119-161 161-203 (208)
420 3eyt_A Uncharacterized protein 96.2 0.021 7.2E-07 44.8 8.4 80 180-262 28-149 (158)
421 3or5_A Thiol:disulfide interch 96.1 0.029 1E-06 44.2 9.1 82 179-263 33-149 (165)
422 3lor_A Thiol-disulfide isomera 96.1 0.025 8.4E-07 44.5 8.5 80 180-262 30-152 (160)
423 1ttz_A Conserved hypothetical 96.1 0.017 5.9E-07 40.6 6.6 71 184-263 3-75 (87)
424 3c7m_A Thiol:disulfide interch 95.9 0.013 4.3E-07 48.1 6.3 42 73-114 17-59 (195)
425 3ira_A Conserved protein; meth 95.9 0.026 8.8E-07 45.4 7.6 84 155-241 13-115 (173)
426 3hdc_A Thioredoxin family prot 95.8 0.038 1.3E-06 43.4 8.3 86 179-267 40-154 (158)
427 2fgx_A Putative thioredoxin; N 95.8 0.019 6.6E-07 42.1 5.9 71 182-260 30-106 (107)
428 2b1k_A Thiol:disulfide interch 95.8 0.02 6.9E-07 45.5 6.7 79 179-262 50-157 (168)
429 3gl3_A Putative thiol:disulfid 95.8 0.032 1.1E-06 43.4 7.6 82 180-264 28-141 (152)
430 1z6n_A Hypothetical protein PA 95.8 0.025 8.7E-07 45.2 7.1 78 180-262 54-140 (167)
431 3ha9_A Uncharacterized thiored 95.7 0.05 1.7E-06 43.0 8.9 80 179-263 36-162 (165)
432 3kh7_A Thiol:disulfide interch 95.6 0.02 6.9E-07 46.1 6.0 80 180-262 58-164 (176)
433 3hcz_A Possible thiol-disulfid 95.5 0.047 1.6E-06 42.0 7.5 80 179-261 30-142 (148)
434 3kcm_A Thioredoxin family prot 95.4 0.049 1.7E-06 42.4 7.5 82 179-263 27-141 (154)
435 3fkf_A Thiol-disulfide oxidore 95.4 0.076 2.6E-06 40.8 8.5 79 179-263 32-144 (148)
436 3kp9_A Vkorc1/thioredoxin doma 95.3 0.026 8.9E-07 49.4 6.2 83 170-263 189-278 (291)
437 2in3_A Hypothetical protein; D 95.2 0.034 1.1E-06 46.4 6.2 46 116-161 165-210 (216)
438 2lrn_A Thiol:disulfide interch 95.0 0.11 3.7E-06 40.4 8.3 78 179-262 28-138 (152)
439 1t4y_A Adaptive-response senso 94.8 0.7 2.4E-05 33.0 10.9 84 76-160 13-98 (105)
440 2dlx_A UBX domain-containing p 94.8 0.18 6.3E-06 39.4 9.0 84 175-262 37-133 (153)
441 3lwa_A Secreted thiol-disulfid 94.7 0.1 3.5E-06 42.0 7.7 81 179-262 58-178 (183)
442 2e7p_A Glutaredoxin; thioredox 94.3 0.035 1.2E-06 41.0 3.7 85 171-263 11-106 (116)
443 2hyx_A Protein DIPZ; thioredox 94.2 0.085 2.9E-06 47.6 6.7 80 180-262 82-196 (352)
444 2wul_A Glutaredoxin related pr 94.2 0.091 3.1E-06 39.1 5.7 68 63-140 10-87 (118)
445 1u6t_A SH3 domain-binding glut 93.9 0.14 4.9E-06 38.1 6.2 57 76-140 1-75 (121)
446 3fw2_A Thiol-disulfide oxidore 93.8 0.48 1.7E-05 36.4 9.7 78 179-262 32-145 (150)
447 2ywi_A Hypothetical conserved 93.7 0.12 4E-06 42.2 6.2 79 181-262 47-171 (196)
448 2rli_A SCO2 protein homolog, m 93.7 0.24 8.1E-06 39.2 7.8 80 180-262 26-161 (171)
449 1wjk_A C330018D20RIK protein; 93.4 0.49 1.7E-05 33.9 8.3 75 180-263 15-94 (100)
450 2jad_A Yellow fluorescent prot 93.0 0.076 2.6E-06 47.7 4.2 70 65-139 253-328 (362)
451 2cvb_A Probable thiol-disulfid 93.0 0.22 7.6E-06 40.1 6.7 80 180-262 33-156 (188)
452 2kok_A Arsenate reductase; bru 92.7 0.54 1.9E-05 35.0 7.9 43 77-125 7-56 (120)
453 3ewl_A Uncharacterized conserv 92.5 0.43 1.5E-05 36.2 7.4 78 180-263 27-139 (142)
454 2ggt_A SCO1 protein homolog, m 92.3 0.27 9.1E-06 38.5 6.2 80 180-262 23-158 (164)
455 2lrt_A Uncharacterized protein 92.1 0.64 2.2E-05 36.0 8.1 75 180-257 35-140 (152)
456 1jfu_A Thiol:disulfide interch 91.8 0.71 2.4E-05 36.9 8.4 84 180-263 60-178 (186)
457 3eur_A Uncharacterized protein 91.6 0.43 1.5E-05 36.3 6.5 77 180-262 31-142 (142)
458 1un2_A DSBA, thiol-disulfide i 91.5 0.078 2.7E-06 43.6 2.1 65 302-373 41-108 (197)
459 3tdg_A DSBG, putative uncharac 91.1 0.18 6E-06 43.5 3.9 28 73-100 147-174 (273)
460 3s9f_A Tryparedoxin; thioredox 90.9 0.83 2.8E-05 35.9 7.7 58 180-240 48-138 (165)
461 2x8g_A Thioredoxin glutathione 90.8 0.27 9.1E-06 47.9 5.5 68 64-141 9-83 (598)
462 2k6v_A Putative cytochrome C o 90.6 0.72 2.5E-05 36.2 7.1 83 179-262 34-170 (172)
463 1o8x_A Tryparedoxin, TRYX, TXN 90.4 0.87 3E-05 34.7 7.2 56 180-238 28-116 (146)
464 1o73_A Tryparedoxin; electron 90.0 0.93 3.2E-05 34.3 7.1 56 180-238 28-116 (144)
465 1i5g_A Tryparedoxin II; electr 89.9 0.99 3.4E-05 34.3 7.2 59 179-240 27-119 (144)
466 3kgk_A Arsenical resistance op 89.8 0.99 3.4E-05 32.7 6.4 64 91-157 22-99 (110)
467 3ktb_A Arsenical resistance op 89.5 0.67 2.3E-05 33.4 5.3 62 92-156 26-101 (106)
468 4fo5_A Thioredoxin-like protei 88.8 0.84 2.9E-05 34.7 6.0 76 180-261 32-141 (143)
469 1z3e_A Regulatory protein SPX; 88.2 0.44 1.5E-05 36.2 3.8 34 77-116 3-36 (132)
470 3c7m_A Thiol:disulfide interch 87.4 0.29 1E-05 39.7 2.6 43 116-160 151-193 (195)
471 1t3b_A Thiol:disulfide interch 87.4 1 3.5E-05 37.2 6.0 39 217-263 171-209 (211)
472 3u5r_E Uncharacterized protein 87.0 1.7 5.7E-05 36.0 7.1 76 182-262 61-184 (218)
473 2bmx_A Alkyl hydroperoxidase C 86.5 1.7 5.8E-05 35.1 6.8 82 180-264 45-169 (195)
474 2vup_A Glutathione peroxidase- 85.7 2.8 9.5E-05 33.6 7.7 30 233-262 153-182 (190)
475 2k8s_A Thioredoxin; dimer, str 85.7 0.52 1.8E-05 31.9 2.7 50 184-236 4-61 (80)
476 1zof_A Alkyl hydroperoxide-red 85.4 0.82 2.8E-05 37.1 4.4 45 216-263 106-159 (198)
477 2p5q_A Glutathione peroxidase 85.0 3.2 0.00011 32.2 7.6 36 179-214 31-71 (170)
478 2g2q_A Glutaredoxin-2; thiored 84.2 2.1 7.2E-05 31.1 5.3 36 74-113 2-37 (124)
479 3l78_A Regulatory protein SPX; 83.5 1.1 3.6E-05 33.4 3.8 34 77-116 2-35 (120)
480 1eej_A Thiol:disulfide interch 83.3 1.6 5.5E-05 36.1 5.3 39 217-263 171-209 (216)
481 2imf_A HCCA isomerase, 2-hydro 83.1 1.3 4.6E-05 36.1 4.7 39 117-160 157-195 (203)
482 3cmi_A Peroxiredoxin HYR1; thi 82.8 3.8 0.00013 32.0 7.2 30 233-262 136-165 (171)
483 1we0_A Alkyl hydroperoxide red 82.5 1.4 4.7E-05 35.4 4.5 47 216-262 101-154 (187)
484 1xvw_A Hypothetical protein RV 82.2 4.2 0.00014 31.3 7.1 82 181-262 37-157 (160)
485 1kte_A Thioltransferase; redox 81.7 4.2 0.00014 28.7 6.5 60 171-235 3-73 (105)
486 1rw1_A Conserved hypothetical 80.9 1.3 4.3E-05 32.6 3.4 34 77-116 2-35 (114)
487 3fz4_A Putative arsenate reduc 80.9 1.9 6.4E-05 32.0 4.3 34 77-116 5-38 (120)
488 3fys_A Protein DEGV; fatty aci 80.6 1.5 5E-05 38.8 4.2 157 113-284 45-206 (315)
489 2v1m_A Glutathione peroxidase; 80.5 7.5 0.00026 30.0 8.2 35 180-214 31-70 (169)
490 3gl5_A Putative DSBA oxidoredu 79.4 2.6 9E-05 35.5 5.3 42 117-162 173-214 (239)
491 3dwv_A Glutathione peroxidase- 79.0 10 0.00035 30.1 8.6 31 233-263 151-181 (187)
492 3ic4_A Glutaredoxin (GRX-1); s 77.9 6 0.0002 27.1 6.1 68 184-261 14-91 (92)
493 3gyk_A 27KDA outer membrane pr 76.7 12 0.00042 29.1 8.4 35 219-262 136-170 (175)
494 3fz5_A Possible 2-hydroxychrom 76.5 2.5 8.4E-05 34.5 4.2 37 117-158 163-199 (202)
495 3kij_A Probable glutathione pe 76.2 14 0.00049 28.9 8.7 36 179-214 37-77 (180)
496 2obi_A PHGPX, GPX-4, phospholi 76.0 7.3 0.00025 30.8 6.9 35 180-214 47-86 (183)
497 1r7h_A NRDH-redoxin; thioredox 75.7 10 0.00035 24.4 6.6 68 184-261 3-74 (75)
498 3gkx_A Putative ARSC family re 74.0 2 6.8E-05 31.9 2.7 34 77-116 6-39 (120)
499 2b7k_A SCO1 protein; metalloch 73.9 10 0.00035 30.5 7.4 30 233-262 147-176 (200)
500 3drn_A Peroxiredoxin, bacterio 73.2 10 0.00035 29.1 6.9 46 216-261 95-145 (161)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.5e-47 Score=369.48 Aligned_cols=312 Identities=21% Similarity=0.370 Sum_probs=278.6
Q ss_pred CcEEcChhcHHHHhcCC---CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 57 DVVSLNGKNFSEFMGKN---RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~---~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
.|+.||+++|++.+.++ ++++|+|||+||++|+++.|.|+++++.+++.+.++.|||++++++|++|+|+++||+++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 67899999999999777 999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCCCCccHHHHHHHh-ccCCceeEE
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFY 212 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~ 212 (378)
|++|+.+.+|.|.++.+.|.+|+.+.+++++..+.+.++++++++.++.++|+||.++++...+.|..+| .+++++.|+
T Consensus 82 ~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F~ 161 (481)
T 3f8u_A 82 FRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFA 161 (481)
T ss_dssp EETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTSCEE
T ss_pred EeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCceEE
Confidence 9999889999999999999999999999999999999999999999999999999998999999999988 778999999
Q ss_pred EEccHHHHhhcCCCCCCCCCeEEEee------cCCCCccccC-CCCCHHHHHHHHHhcCCCceEEecccchhhhhccchH
Q 017071 213 QTTSADVAEFFHIHPKSKRPALIFLH------LEAGKATPFR-HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK 285 (378)
Q Consensus 213 ~~~~~~~~~~~~i~~~~~~P~i~~~~------~~~~~~~~y~-g~~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~~~ 285 (378)
++.+.+++++++++. +.+++|+ ..++....|+ |.++.++|.+||+.+++|++++++.+++..++..+.+
T Consensus 162 ~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~~~~ 237 (481)
T 3f8u_A 162 HTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLL 237 (481)
T ss_dssp EECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTSSEE
T ss_pred EECCHHHHHHhCCCC----CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCCCce
Confidence 999999999999985 6688898 4456788999 7899999999999999999999999998887543321
Q ss_pred H----------------------------------HHHHhhhcCcchhhhhhHhhcCCC--CCCCcEEEEEcCCCccccC
Q 017071 286 Q----------------------------------LLHVYVEMNSEGVGRRVSQEFGVS--GNAPRVIAYSARDAKKYVL 329 (378)
Q Consensus 286 ~----------------------------------l~f~~~d~~~~~~~~~l~~~~gi~--~~~~p~i~i~~~~~~~y~~ 329 (378)
. +.|+++ +...+. +.++.||++ ....|+++|.+.++.+|.|
T Consensus 238 v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~--D~~~~~-~~l~~~gl~~~~~~~P~~~i~~~~~~ky~~ 314 (481)
T 3f8u_A 238 IAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVA--SRKTFS-HELSDFGLESTAGEIPVVAIRTAKGEKFVM 314 (481)
T ss_dssp EEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE--ETTTTH-HHHGGGTCCCCTTCSCEEEEECSSSCEEEC
T ss_pred EEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEE--cHHHHH-HHHHHcCCCcccCCCcEEEEEcCCCcccCC
Confidence 0 123333 334433 445899998 4478999999877889999
Q ss_pred CCCCCHH--HHHHHHHHHhcCce--eeeccCCchh----hhccCCccccceeee
Q 017071 330 NGELTLS--SIKSFGEEFLEDKL--LNQSDQISET----ILKLPSQSRASYQLR 375 (378)
Q Consensus 330 ~~~~~~~--~i~~Fi~~~~~Gkl--~~kSe~~p~~----~~~~v~~~~~~~~~~ 375 (378)
+++++.+ +|.+|++++++|++ +++|+++|+. +..++|+||++++.+
T Consensus 315 ~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~ 368 (481)
T 3f8u_A 315 QEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN 368 (481)
T ss_dssp CSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC
T ss_pred CcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc
Confidence 9999999 99999999999999 8999999976 888999999988765
No 2
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-47 Score=356.60 Aligned_cols=306 Identities=20% Similarity=0.298 Sum_probs=233.9
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc------CCcEEEEEeCcCcHHHHHHcCCCCCc
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK------GEADLVMVDAYLEKDLAKEYNILAYP 129 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~v~~~P 129 (378)
+.++.|++++|+..+.++++++|+|||+||++|+++.|.|+++++.++ +++.++.|||++++++|++|+|+++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 468899999999988889999999999999999999999999999983 36999999999999999999999999
Q ss_pred EEEEEeCCeEee-eeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCCCCccHHHHHHHh-ccCC
Q 017071 130 TLYLFVAGVRQF-QFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHS 207 (378)
Q Consensus 130 t~~~~~~g~~~~-~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~ 207 (378)
|+++|++|+.+. .|.|.++.+.|.+|+.+.+++++..+.+.++++. +..++.++|+||.+++.+.++.|..+| .+++
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~ 163 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHD 163 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhc
Confidence 999999998766 5999999999999999999999999988888888 677888999999998888899999988 6789
Q ss_pred ceeEEEEccHHHHhhcCCCCCCCCCeEEEeecC--CCCccccCCCC-CHHHHHHHHHhcCCCceEEecccchhhhhccch
Q 017071 208 DVNFYQTTSADVAEFFHIHPKSKRPALIFLHLE--AGKATPFRHQF-TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR 284 (378)
Q Consensus 208 ~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~--~~~~~~y~g~~-~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~~ 284 (378)
++.|+.+.+ +++++++++. .| + +|++. +.....|+|.+ +.++|.+||+.++.|++++++.+++..++..+.
T Consensus 164 ~~~F~~~~~-~~~~~~~v~~---~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~ 237 (382)
T 2r2j_A 164 DCAFLSAFG-DVSKPERYSG---DN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGL 237 (382)
T ss_dssp TCEEEEEES-CC-----------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCC
T ss_pred cceEEEEeh-hhHHhhCCCC---Cc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCC
Confidence 999998887 6888899875 67 4 55554 34678899998 899999999999999999999999988776554
Q ss_pred HH-H-----------------------------HHHhhhcCcchhhhhhHhhcCCCCCCCcEEEEEcCCCccccCC---C
Q 017071 285 KQ-L-----------------------------LHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLN---G 331 (378)
Q Consensus 285 ~~-l-----------------------------~f~~~d~~~~~~~~~l~~~~gi~~~~~p~i~i~~~~~~~y~~~---~ 331 (378)
+. + .|+++|.+ .+. ++++.||++....|+++|.+.+ +.|.|. +
T Consensus 238 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~--~~~-~~~~~~gl~~~~~P~i~i~~~~-~~y~~~~~~~ 313 (382)
T 2r2j_A 238 PFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCD--KFR-HPLLHIQKTPADCPVIAIDSFR-HMYVFGDFKD 313 (382)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETT--TTH-HHHHHTTCCGGGCSEEEEECSS-CEEECCCSGG
T ss_pred cEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchH--HhH-HHHHHcCCCccCCCEEEEEcch-hcCCCCcccc
Confidence 31 1 34444443 333 4578999987778999998762 335543 3
Q ss_pred CCCHHHHHHHHHHHhcCce--eeeccCCchhh----------hccCCccccce
Q 017071 332 ELTLSSIKSFGEEFLEDKL--LNQSDQISETI----------LKLPSQSRASY 372 (378)
Q Consensus 332 ~~~~~~i~~Fi~~~~~Gkl--~~kSe~~p~~~----------~~~v~~~~~~~ 372 (378)
.++.++|.+|++++++|++ ++||||+|++- ...|.++|++.
T Consensus 314 ~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~~~~~~~~~~~~~~~s~f~~l 366 (382)
T 2r2j_A 314 VLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPPESSFQKL 366 (382)
T ss_dssp GGSTTHHHHHHHHHHHTTTSSCC-------------------CCCCCCSGGGG
T ss_pred ccCHHHHHHHHHHHHCCCccccccCCCCCCCCCcccccccCCCCCCccccccc
Confidence 5678999999999999999 99999999972 56788888875
No 3
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=1.2e-45 Score=342.82 Aligned_cols=289 Identities=15% Similarity=0.216 Sum_probs=250.7
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhH------HHHHHHHHHhcC-CcEEEEEeCcCcHHHHHHcCCC
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLA------PEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL 126 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~------p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~ 126 (378)
..+.|+.|+.++|++.+.++++++|+||||||+||+... |.++++++.+++ ++.+++|||++++++|++|+|+
T Consensus 11 ~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~ 90 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT 90 (367)
T ss_dssp CCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC
Confidence 345799999999999998899999999999999974433 799999999987 6999999999999999999999
Q ss_pred CCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhc-cCCeEEEEEEcCCCCccHHHHHHHh-c
Q 017071 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-K 204 (378)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~a-~ 204 (378)
++||+++|++|+. ..|.|.++.+.|.+|+.+.+++++..+++.++++++++ .++.++|+||.++|++..+.|.++| .
T Consensus 91 ~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~ 169 (367)
T 3us3_A 91 EEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEE 169 (367)
T ss_dssp STTEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHH
T ss_pred cCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHh
Confidence 9999999999965 59999999999999999999999999999999999998 6789999999999999999999988 6
Q ss_pred cCCceeEEEEccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCC-CCHHHHHHHHHhcCCCceEEecccchhhhhccc
Q 017071 205 LHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (378)
Q Consensus 205 ~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~-~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~ 283 (378)
+++++.|+++.+++++++|+++. |+|++|+..++.+..|+|. ++.++|.+||+.++.|++++++.+++..++.+.
T Consensus 170 ~~~~~~F~~~~~~~~~~~~~v~~----p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 245 (367)
T 3us3_A 170 FHPYIPFFATFDSKVAKKLTLKL----NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDD 245 (367)
T ss_dssp HTTTSCEEEECCHHHHHHHTCCT----TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSC
T ss_pred hcCCcEEEEECCHHHHHHcCCCC----CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhc
Confidence 78899999999999999999984 9999999977789999995 899999999999999999999999987665531
Q ss_pred h--HH-------------------------------HHHHhhhcCcchhhhhh---HhhcCCCCCCCcEEEEEcC-CC--
Q 017071 284 R--KQ-------------------------------LLHVYVEMNSEGVGRRV---SQEFGVSGNAPRVIAYSAR-DA-- 324 (378)
Q Consensus 284 ~--~~-------------------------------l~f~~~d~~~~~~~~~l---~~~~gi~~~~~p~i~i~~~-~~-- 324 (378)
. ++ +.|+++|++. +.+.+ .+.||++ ...|+++|.+. ++
T Consensus 246 ~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~--~~~~l~~~~~~fgl~-~~~P~~~i~~~~~~~~ 322 (367)
T 3us3_A 246 MDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDD--FPLLVPYWEKTFDID-LSAPQIGVVNVTDADS 322 (367)
T ss_dssp BTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGG--CTTTHHHHHHHHTCC-TTSCEEEEEETTTCCE
T ss_pred cCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCcc--chhHHHHHHHhcCCC-CCCCeEEEEecccccc
Confidence 1 11 1344444443 33332 3569998 46899999998 44
Q ss_pred ccccCCC---CCCHHHHHHHHHHHhcCce
Q 017071 325 KKYVLNG---ELTLSSIKSFGEEFLEDKL 350 (378)
Q Consensus 325 ~~y~~~~---~~~~~~i~~Fi~~~~~Gkl 350 (378)
++|.+++ ++|.++|.+|++++++||+
T Consensus 323 ~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl 351 (367)
T 3us3_A 323 VWMEMDDEEDLPSAEELEDWLEDVLEGEI 351 (367)
T ss_dssp EECCCCTTSCCCCHHHHHHHHHHHHHTSS
T ss_pred eeecCCcccccCCHHHHHHHHHHHHcCCc
Confidence 5777774 7999999999999999999
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=5.1e-45 Score=337.19 Aligned_cols=286 Identities=19% Similarity=0.250 Sum_probs=251.4
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHH-------HHHHHHHhcC-CcEEEEEeCcCcHHHHHHcCCC
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-------FAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL 126 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~-------~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~ 126 (378)
.+.|+.|++++|++.+.++++++|+||||||+ |+.++|. |+++++.+++ ++.+++|||++++++|++|+|+
T Consensus 10 ~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 35689999999999998899999999999999 9999999 9999999987 6999999999999999999999
Q ss_pred CCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhc-cCCeEEEEEEcCCCCccHHHHHHHh-c
Q 017071 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-K 204 (378)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~a-~ 204 (378)
++||+++|++|+ ..+|.|.++.+.|.+|+.+.+++++..+++.++++++++ +++.++|+||.++|++..+.|.++| .
T Consensus 89 ~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~ 167 (350)
T 1sji_A 89 EEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEH 167 (350)
T ss_dssp STTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHh
Confidence 999999999996 679999999999999999999999999999999999998 7788999999999999999999988 6
Q ss_pred cCCceeEEEEccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCC-CCHHHHHHHHHhcCCCceEEecccchhhhhccc
Q 017071 205 LHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (378)
Q Consensus 205 ~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~-~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~ 283 (378)
+++++.|+.+.+++++++++++ +|++++|++.++.+..|+|+ ++.++|.+||+.++.|++++++.+++..+++.+
T Consensus 168 ~~~~~~f~~~~~~~~~~~~~v~----~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 243 (350)
T 1sji_A 168 FQPYIKFFATFDKGVAKKLSLK----MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDD 243 (350)
T ss_dssp TTTTSEEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSC
T ss_pred hccCcEEEEECCHHHHHHcCCC----CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCC
Confidence 7799999999999999999997 59999999877788999998 899999999999999999999999998877643
Q ss_pred h-H--HH------------------------------HHHhhhcCcchhhhhhH----hhcCCCCCCCcEEEEEcC-CCc
Q 017071 284 R-K--QL------------------------------LHVYVEMNSEGVGRRVS----QEFGVSGNAPRVIAYSAR-DAK 325 (378)
Q Consensus 284 ~-~--~l------------------------------~f~~~d~~~~~~~~~l~----~~~gi~~~~~p~i~i~~~-~~~ 325 (378)
. + .+ .|+++|++ .+. .++ +.||++ ...|+++|.+. ++.
T Consensus 244 ~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~--~~~-~~~~~~~~~~gi~-~~~P~~~i~~~~~~~ 319 (350)
T 1sji_A 244 LNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD--DFP-LLVAYWEKTFKID-LFKPQIGVVNVTDAD 319 (350)
T ss_dssp SSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG--GCH-HHHHHHHHHCCSC-TTSCEEEEEESSSSC
T ss_pred CCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch--hhH-HHHHHHHhhcCCC-ccCCcEEEEeccccc
Confidence 2 1 00 24444443 333 345 789998 45799999988 554
Q ss_pred ccc--CC---CCCCHHHHHHHHHHHhcCce
Q 017071 326 KYV--LN---GELTLSSIKSFGEEFLEDKL 350 (378)
Q Consensus 326 ~y~--~~---~~~~~~~i~~Fi~~~~~Gkl 350 (378)
+|. ++ ++++.++|.+|++++++|++
T Consensus 320 ~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 320 SVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp EEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred ccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 555 44 48999999999999999986
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=9.7e-44 Score=344.55 Aligned_cols=306 Identities=18% Similarity=0.268 Sum_probs=267.4
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
..+.++.|++++|++.+.++++++|+||||||+||+++.|.|+++++.+++ ++.++.|||++++++|++|+|+++||++
T Consensus 12 ~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 91 (504)
T 2b5e_A 12 EDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLK 91 (504)
T ss_dssp TTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 456899999999999998899999999999999999999999999999988 5999999999999999999999999999
Q ss_pred EEeCCeE--eeeeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCC--eEEEEEEcCCCCccHHHHHHHh-ccCC
Q 017071 133 LFVAGVR--QFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVES--KLVLGFLHDLEGMESEELAAAS-KLHS 207 (378)
Q Consensus 133 ~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~--~~~v~f~~~~~~~~~~~~~~~a-~~~~ 207 (378)
+|++|+. ..+|.|.++.+.|.+|+.+.+++++..+++ ++++++.++ ..+|+||.+.++.....|..+| .+++
T Consensus 92 ~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~~ 168 (504)
T 2b5e_A 92 IFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFN 168 (504)
T ss_dssp EEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTTT
T ss_pred EEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhhc
Confidence 9999976 889999999999999999999999999987 888888777 8889999887788889999988 7789
Q ss_pred ceeEEEEccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCC-C---CHHHHHHHHHhcCCCceEEecccchhhhhccc
Q 017071 208 DVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-F---TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (378)
Q Consensus 208 ~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~-~---~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~ 283 (378)
++.|+.+. +++++++++ +++|+..+ .+..|+|+ + +.+.|.+||..+.+|++++++.+++..+++.+
T Consensus 169 ~~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~ 238 (504)
T 2b5e_A 169 DYDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESG 238 (504)
T ss_dssp TCEEEEEE--CTTSCCEEE-------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTT
T ss_pred CcEEEEEH--HHHHhcCCe-------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCC
Confidence 99999887 677777762 78888765 78889998 7 89999999999999999999999998887665
Q ss_pred hH-HH---------------------------HHHhhhcCcchhhhhhHhhcCCCCCCCcEEEEEcC-CCccccCC--CC
Q 017071 284 RK-QL---------------------------LHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN--GE 332 (378)
Q Consensus 284 ~~-~l---------------------------~f~~~d~~~~~~~~~l~~~~gi~~~~~p~i~i~~~-~~~~y~~~--~~ 332 (378)
.+ ++ .|+++|++ .+ .++++.||+ ....|+++|.+. ++.+|.++ ++
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~--~~-~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~~~ 314 (504)
T 2b5e_A 239 LPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDAR--KF-GRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQLSE 314 (504)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHH--HH-TTHHHHTTC-CSCSSEEEEEETTTTEEEECCCCCH
T ss_pred CcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehh--hh-HHHHHHcCC-cccCCEEEEEeCCcCcccCCCCCcc
Confidence 44 11 34445443 43 356799999 778999999998 77889887 55
Q ss_pred -----------CCHHHHHHHHHHHhcCce--eeeccCCchh----hhccCCccccceeeec
Q 017071 333 -----------LTLSSIKSFGEEFLEDKL--LNQSDQISET----ILKLPSQSRASYQLRT 376 (378)
Q Consensus 333 -----------~~~~~i~~Fi~~~~~Gkl--~~kSe~~p~~----~~~~v~~~~~~~~~~~ 376 (378)
++.+.|.+|+.+++.|++ +.+|+++|+. +..++++||++.+++.
T Consensus 315 ~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~ 375 (504)
T 2b5e_A 315 EAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDP 375 (504)
T ss_dssp HHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCT
T ss_pred chhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccC
Confidence 899999999999999999 8899999964 7889999999887653
No 6
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-34 Score=257.59 Aligned_cols=223 Identities=20% Similarity=0.337 Sum_probs=191.8
Q ss_pred cccCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc--CcHHHHHHcCCCCC
Q 017071 52 LLYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAY 128 (378)
Q Consensus 52 ~~~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~ 128 (378)
......+++|+.++|++.+ ..+++++|+|||+||++|+++.|.|+++++.+++.+.++.|||+ +++++|++|+|.++
T Consensus 13 ~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 13 YDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 3455789999999999988 56889999999999999999999999999999888999999998 68999999999999
Q ss_pred cEEEEEeCCe-----------------EeeeeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCC
Q 017071 129 PTLYLFVAGV-----------------RQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDL 191 (378)
Q Consensus 129 Pt~~~~~~g~-----------------~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~ 191 (378)
||+++|++|+ ....|.|.++.+.|.+|+.+.+++.+..+.+.++++++++.++...|++|..
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~- 171 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSK- 171 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEES-
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcC-
Confidence 9999999886 3678999999999999999999999999999999999998854444444543
Q ss_pred CCccHHHHHHHh-ccCCceeEEEEccHHHHhhcCCCC--------------------CCCCCeEEEeecCCCCccccCC-
Q 017071 192 EGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHP--------------------KSKRPALIFLHLEAGKATPFRH- 249 (378)
Q Consensus 192 ~~~~~~~~~~~a-~~~~~~~f~~~~~~~~~~~~~i~~--------------------~~~~P~i~~~~~~~~~~~~y~g- 249 (378)
.+...+.|..+| .+++++.|+.+.+.++++.++++. ....|+|++|+..++.+..|+|
T Consensus 172 ~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~ 251 (298)
T 3ed3_A 172 QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGN 251 (298)
T ss_dssp SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCS
T ss_pred CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccc
Confidence 455678899988 788999999998888775442200 0237999999998889999996
Q ss_pred CCCHHHHHHHHH--hcCCCceEEecccc
Q 017071 250 QFTRLAIANFVT--HTKHPLVVTLTIHN 275 (378)
Q Consensus 250 ~~~~~~l~~fi~--~~~~P~~~~l~~~~ 275 (378)
.++.++|.+||. .+..|++++++..+
T Consensus 252 ~~~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 252 SINKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp SCCHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred cCCHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 689999999999 78999999999755
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.7e-32 Score=279.00 Aligned_cols=287 Identities=15% Similarity=0.229 Sum_probs=226.0
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
.+..+..|+.++|++.+.++++++|+|||+||++|+++.|.|+++++.+++.+.++.|||++++++|++|+|.++||+++
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEE
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEE
Confidence 45679999999999999899999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCCCH---HHHHHhhccCCeEEEEEEcCCC-CccHHHHHHHh-c----
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTT---DEAERILTVESKLVLGFLHDLE-GMESEELAAAS-K---- 204 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~---~~~~~~~~~~~~~~v~f~~~~~-~~~~~~~~~~a-~---- 204 (378)
|++|+.+.+|.|.++.+.|.+|+.+.+++.+..+.+. +++++++..+.+.+|+|+.... .+....+.+++ .
T Consensus 194 ~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~ 273 (780)
T 3apo_A 194 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGL 273 (780)
T ss_dssp ECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTT
T ss_pred EeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHhhcc
Confidence 9999888999999999999999999999999999887 6888888778888888876543 12222222221 1
Q ss_pred --------------------------------------------------------------------------------
Q 017071 205 -------------------------------------------------------------------------------- 204 (378)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (378)
T Consensus 274 ~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~ 353 (780)
T 3apo_A 274 VNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHR 353 (780)
T ss_dssp EEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSE
T ss_pred ceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCC
Confidence
Q ss_pred ------------------------cC-CceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCC-CCccccCCCCCHHH
Q 017071 205 ------------------------LH-SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEA-GKATPFRHQFTRLA 255 (378)
Q Consensus 205 ------------------------~~-~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~-~~~~~y~g~~~~~~ 255 (378)
+. ..+.|+.+ .++.++++++++. |++++|+..+ +.+..|+|..+.++
T Consensus 354 ~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~----p~i~l~~~~~~e~~~~~~g~~~~~~ 429 (780)
T 3apo_A 354 WLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ----PSLAVFKGQGTKEYEIHHGKKILYD 429 (780)
T ss_dssp EEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS----CEEEEEESSTTSSEEECCSCCCHHH
T ss_pred eEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC----ChhhhccCCCcceeeecccHhhHHH
Confidence 11 23455554 4567888999874 9999999876 55788999999999
Q ss_pred HHHHHHhcCCCceEEecccchhhhhccc---------hH-------HH-----------HHHhhhcCcchhhhhhHhhcC
Q 017071 256 IANFVTHTKHPLVVTLTIHNAQFVFQDP---------RK-------QL-----------LHVYVEMNSEGVGRRVSQEFG 308 (378)
Q Consensus 256 l~~fi~~~~~P~~~~l~~~~~~~~~~~~---------~~-------~l-----------~f~~~d~~~~~~~~~l~~~~g 308 (378)
|.+|+..+..|.+.+++.+++..+.... |+ .+ .|+.+|++. ...+++.+|
T Consensus 430 i~~f~~~~~~~~v~~l~~~~~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~---~~~~~~~~~ 506 (780)
T 3apo_A 430 ILAFAKESVNSHVTTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTI---HEGLCNMYN 506 (780)
T ss_dssp HHHHHHHHHTSCEEECCTTTSCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTT
T ss_pred HHHHhhhccCCCCEecCHHHHHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCC---CHHHHHHcC
Confidence 9999999999999999999887651111 11 01 345555554 346789999
Q ss_pred CCCCCCcEEEEEcCCCccccCCCCCCHHHHHHHHHHHhcCce
Q 017071 309 VSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 350 (378)
Q Consensus 309 i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~Gkl 350 (378)
+.. .|.+++++. +..+.+.|.++.++|.+|+++++++.+
T Consensus 507 v~~--~Pt~~~~~~-g~~~~~~g~~~~~~l~~fi~~~~~~~v 545 (780)
T 3apo_A 507 IQA--YPTTVVFNQ-SSIHEYEGHHSAEQILEFIEDLRNPSV 545 (780)
T ss_dssp CCS--SSEEEEEET-TEEEEECSCSCHHHHHHHHHHHHSCSE
T ss_pred CCc--CCeEEEEcC-CceeeecCcccHHHHHHHHHhhcccce
Confidence 975 789888855 556888999999999999999998665
No 8
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=8e-32 Score=235.90 Aligned_cols=208 Identities=23% Similarity=0.410 Sum_probs=179.2
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC---cEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
....++.+++++|+..+.++++++|+|||+||++|+++.|.|+++++++++. +.++.||+++++++|++|+|+++||
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPT 92 (241)
T ss_dssp EETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCE
Confidence 4568999999999999999999999999999999999999999999999874 9999999999999999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCC------cccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHH
Q 017071 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLG------TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAA 201 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~------~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~ 201 (378)
+++|++|+.+ +|.|.++.+.+.+|+.+...+. .....+.+++++++..++.++|.|+++||++. .+.+..
T Consensus 93 ~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~ 171 (241)
T 3idv_A 93 IKILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEK 171 (241)
T ss_dssp EEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHH
T ss_pred EEEEcCCCcc-cccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHH
Confidence 9999999665 7999999999999999988653 22233668888898888999999999999863 456666
Q ss_pred Hh-ccC---CceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcCCCc
Q 017071 202 AS-KLH---SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (378)
Q Consensus 202 ~a-~~~---~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P~ 267 (378)
++ .+. .++.|+.+ .+++++++|++.. +|++++|+.+ ..+.|.|.++.++|.+||+++.-|.
T Consensus 172 ~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 172 AAKELSKRSPPIPLAKVDATAETDLAKRFDVSG---YPTLKIFRKG--RPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS---SSEEEEEETT--EEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc---cCEEEEEECC--eEEEecCCCCHHHHHHHHHhhhCCC
Confidence 66 333 33777765 5789999999996 9999999975 5667999999999999999987664
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2.8e-31 Score=270.08 Aligned_cols=281 Identities=16% Similarity=0.208 Sum_probs=230.7
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
..+..++.++|+.. .+++++|+|||+||++|++++|.|+++++++++++.|+.|||++++.++++|||.++||+++++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 517 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFN 517 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEc
Confidence 45788999998876 7899999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhcc---CCeEEEEEEcCCCCc---cHHHHHHHh-ccCCc
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV---ESKLVLGFLHDLEGM---ESEELAAAS-KLHSD 208 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~---~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~ 208 (378)
+|+. ..|.|.++.+.|.+|+.+.+.+++..++ .+++++++.. +..++|.|+++||++ ..+.|.++| .++++
T Consensus 518 ~g~~-~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~ 595 (780)
T 3apo_A 518 QSSI-HEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL 595 (780)
T ss_dssp TTEE-EEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CCce-eeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC
Confidence 9855 8899999999999999999999998885 6789888865 467899999999986 456677888 56778
Q ss_pred eeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCC---CccccCC-CCCHHHHHHHHHhcCCCceEEecccchhh-hh
Q 017071 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAG---KATPFRH-QFTRLAIANFVTHTKHPLVVTLTIHNAQF-VF 280 (378)
Q Consensus 209 ~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~---~~~~y~g-~~~~~~l~~fi~~~~~P~~~~l~~~~~~~-~~ 280 (378)
+.|+.+ .+..++++++++. +|++++|+.++. .+..|+| .++.++|.+||.++..|.+.+++.+++.. +.
T Consensus 596 v~~~~vd~~~~~~l~~~~~v~~---~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~ 672 (780)
T 3apo_A 596 INVGSVDCGQYHSFCTQENVQR---YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVL 672 (780)
T ss_dssp SEEEEEETTTTHHHHHHTTCCS---SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTT
T ss_pred eEEEEEECcchHHHHHHcCCCC---CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHh
Confidence 988876 4667899999997 999999998654 4678999 89999999999999999999999988864 43
Q ss_pred ccchHHH-----------------------------HHHhhhcCcchhhhhhHhhcCCCCCCCcEEEEEcCCCccccCC-
Q 017071 281 QDPRKQL-----------------------------LHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLN- 330 (378)
Q Consensus 281 ~~~~~~l-----------------------------~f~~~d~~~~~~~~~l~~~~gi~~~~~p~i~i~~~~~~~y~~~- 330 (378)
..+.+.+ .|+.+|++. ...+++.+|+.. .|.++++..+.....+.
T Consensus 673 ~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~---~~~~~~~~~v~~--~Pt~~~~~~g~~~~~~~G 747 (780)
T 3apo_A 673 QGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQA---YPQTCQKAGIKA--YPSVKLYQYERAKKSIWE 747 (780)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT---CHHHHHHTTCCS--SSEEEEEEEETTTTEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCC---CHHHHHhcCCCc--CCEEEEEcCCCccccccC
Confidence 4443311 233344443 346778899854 68888874433333333
Q ss_pred ---CCCCHHHHHHHHHHHhcC
Q 017071 331 ---GELTLSSIKSFGEEFLED 348 (378)
Q Consensus 331 ---~~~~~~~i~~Fi~~~~~G 348 (378)
+..+.+.|.+||+..+..
T Consensus 748 ~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 748 EQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EEECCCCHHHHHHHHHHHTTC
T ss_pred cccCCcCHHHHHHHHHHHHHH
Confidence 368999999999998853
No 10
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.9e-28 Score=211.99 Aligned_cols=201 Identities=15% Similarity=0.276 Sum_probs=158.6
Q ss_pred HHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCCCCccHHHHHHHh-ccCCceeEEEEccHHHHhhcCCCCCCCCCeEEE
Q 017071 158 EKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 158 ~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
++.+|++..|++.++++++++.+++++|+||.+++++.++.|.++| .+++++.|+++.+++++++++++. |+|++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~----p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNG----EGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSS----EEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCC----CcEEE
Confidence 4578999999999999999999999999999999999999999988 677999999999999999999984 99999
Q ss_pred eecC------CCCcccc-CCCCCHHHHHHHHHhcCCCceEEecccchhhhhccchH--------------------H---
Q 017071 237 LHLE------AGKATPF-RHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK--------------------Q--- 286 (378)
Q Consensus 237 ~~~~------~~~~~~y-~g~~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~~~--------------------~--- 286 (378)
|+++ ++....| +|+++.++|.+||+.+++|+++++|.+|+..++..+.. .
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMM 157 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSSSEEEEEECCBTTTBHHHHHHHHHHHHH
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCCCeEEEEeecchhhcchhHHHHHHHHHH
Confidence 9962 4577899 99999999999999999999999999998775443321 0
Q ss_pred -----------HHHHhhhcCcchhhhhhHhhcCC--CCCCCcEEEEEcCCCccccCCCCCCHHH--HHHHHHHHhcCce-
Q 017071 287 -----------LLHVYVEMNSEGVGRRVSQEFGV--SGNAPRVIAYSARDAKKYVLNGELTLSS--IKSFGEEFLEDKL- 350 (378)
Q Consensus 287 -----------l~f~~~d~~~~~~~~~l~~~~gi--~~~~~p~i~i~~~~~~~y~~~~~~~~~~--i~~Fi~~~~~Gkl- 350 (378)
+.|+++|. ..+. ++++.||+ +....|+++|.+.++.+|.|+++++.++ |.+|++++++|++
T Consensus 158 vA~~~~~k~~~~~F~~~d~--~~~~-~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~~Gkl~ 234 (252)
T 2h8l_A 158 VAKKFLDAGHKLNFAVASR--KTFS-HELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLK 234 (252)
T ss_dssp HHHHHHHTTCCCEEEEEET--TTTH-HHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHHHTCSC
T ss_pred HHHHccccCceEEEEEEch--HHHH-HHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHHCCCcc
Confidence 12445544 4544 46799999 5578999999987778999988999999 9999999999999
Q ss_pred -eeeccCCchhhhccCC
Q 017071 351 -LNQSDQISETILKLPS 366 (378)
Q Consensus 351 -~~kSe~~p~~~~~~v~ 366 (378)
++||||+|++ .+.++
T Consensus 235 ~~~kSe~iPe~-~~~pV 250 (252)
T 2h8l_A 235 RYLKSEPIPES-NDGAA 250 (252)
T ss_dssp CCC--------------
T ss_pred ccccCCCCCCC-CCCCC
Confidence 9999999998 55444
No 11
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.95 E-value=3.3e-27 Score=207.20 Aligned_cols=194 Identities=18% Similarity=0.273 Sum_probs=156.6
Q ss_pred HhcCCcccCCCHHHHHHhhcc-CCeEEEEEEcCCCCccHHHHHHHh-ccCCceeEEEEccHHHHhhcCCCCCCCCCeEEE
Q 017071 159 KMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 159 ~~~~~~~~i~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
+.+|++..|++.++++++++. +++++|+||.++++..++.|.++| .+++++.|+++.+++++++++++. |+|++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~----p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL----GKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS----SEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC----CeEEE
Confidence 467899999999999999998 999999999999999999999998 688999999999999999999985 99999
Q ss_pred eecC------CCCccccC--CCCCHHHHHHHHHhcCCCceEEecccchhhhhccchH-----------------------
Q 017071 237 LHLE------AGKATPFR--HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK----------------------- 285 (378)
Q Consensus 237 ~~~~------~~~~~~y~--g~~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~~~----------------------- 285 (378)
|+++ ++....|+ |.++.++|.+||+.+++|++++++.+|+..++. +.+
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 9963 45778898 478999999999999999999999999887653 221
Q ss_pred H----------HHHHhhhcCcchhhhhhHhhcCCCCCC-CcEEEEEcCCCccccCC-CCCCHHHHHHHHHHHhcCce--e
Q 017071 286 Q----------LLHVYVEMNSEGVGRRVSQEFGVSGNA-PRVIAYSARDAKKYVLN-GELTLSSIKSFGEEFLEDKL--L 351 (378)
Q Consensus 286 ~----------l~f~~~d~~~~~~~~~l~~~~gi~~~~-~p~i~i~~~~~~~y~~~-~~~~~~~i~~Fi~~~~~Gkl--~ 351 (378)
. +.|+++|. .++.+. ++.||++... +|.+++.+.++++|.++ ++++.++|.+|++++++||+ +
T Consensus 158 ~~~~vAk~~kki~F~~~d~--~~~~~~-l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~p~ 234 (250)
T 3ec3_A 158 KVLEVAKDFPEYTFAIADE--EDYATE-VKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFKKGKLKPV 234 (250)
T ss_dssp HHHHHHTTCTTSEEEEEET--TTTHHH-HHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHhhcceeEEEEcH--HHHHHH-HHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHHCCCccce
Confidence 0 13455544 344444 5899998653 56788887778899998 68999999999999999999 9
Q ss_pred eeccCCchh
Q 017071 352 NQSDQISET 360 (378)
Q Consensus 352 ~kSe~~p~~ 360 (378)
+||||||++
T Consensus 235 ~kSepiPe~ 243 (250)
T 3ec3_A 235 IKSQPVPKN 243 (250)
T ss_dssp C--------
T ss_pred eecCCCCCC
Confidence 999999997
No 12
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.94 E-value=9.7e-25 Score=191.11 Aligned_cols=203 Identities=18% Similarity=0.267 Sum_probs=151.7
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC---CcEEEEEeC--cCcHHHHHHcCCCC
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDA--YLEKDLAKEYNILA 127 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~--~~~~~~~~~~~v~~ 127 (378)
....+..+++++|+..+ ..+++++|+|||+||++|+++.|.|+++++++++ ++.++.||| ++++++|++|+|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 34678999999999877 5569999999999999999999999999999987 899999999 67899999999999
Q ss_pred CcEEEEEeCCeE-----eeeeeCCCCHHHHHHHHHHHhcCCcc---------cCCCHHHHHHhhcc--CCeEEEEEEcCC
Q 017071 128 YPTLYLFVAGVR-----QFQFFGERTRDVISAWVREKMTLGTY---------SITTTDEAERILTV--ESKLVLGFLHDL 191 (378)
Q Consensus 128 ~Pt~~~~~~g~~-----~~~~~g~~~~~~l~~~i~~~~~~~~~---------~i~~~~~~~~~~~~--~~~~~v~f~~~~ 191 (378)
+||+++|++|+. ...+.| .+.+.|.++|.+.+..... ...+.+++..++.. .+...+.|...
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~- 167 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXG- 167 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECT-
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEEC-
Confidence 999999996422 225666 6999999999998854332 33466888888754 34444545443
Q ss_pred CCccHHHHHHHhccCCceeEEEEcc--HHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCC-CHHHHHHHHHh
Q 017071 192 EGMESEELAAASKLHSDVNFYQTTS--ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVTH 262 (378)
Q Consensus 192 ~~~~~~~~~~~a~~~~~~~f~~~~~--~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~-~~~~l~~fi~~ 262 (378)
.......+...-.....+.+..+.+ .+++++|+++. +|+++++.+++ +...++... +.+.+..+++.
T Consensus 168 ~~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~---~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 168 GSYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD---FPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQR 237 (244)
T ss_dssp TCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSSSHHHHHHHHHT
T ss_pred CcchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC---CCeEEEEeCCC-CeEeeccccccHHHHHHHHHh
Confidence 3332222222112335566666544 89999999997 99999998764 666666443 44666666654
No 13
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.93 E-value=1e-24 Score=188.73 Aligned_cols=194 Identities=13% Similarity=0.183 Sum_probs=155.7
Q ss_pred hcHHHHh---cCCCcEEEEEecC-CChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--cHHHHHHcCCCCCcEEEEEeCC
Q 017071 64 KNFSEFM---GKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFVAG 137 (378)
Q Consensus 64 ~~~~~~~---~~~~~~lv~F~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~g 137 (378)
+.+++.+ .++.+++|.||++ ||++|+++.|.++++++. .+++.++.|||++ ++++|++|||.++||+++|++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g 88 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDG 88 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCC
Confidence 4455555 2456778999999 999999999999999865 4589999999999 9999999999999999999988
Q ss_pred eEe-eeeeCCCCHHHHHHHHHHHhc--CCcccCCCHHHHHHhhccCCeE-EEEEEcCCCCcc---HHHHHHHh-ccC---
Q 017071 138 VRQ-FQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGME---SEELAAAS-KLH--- 206 (378)
Q Consensus 138 ~~~-~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~-~v~f~~~~~~~~---~~~~~~~a-~~~--- 206 (378)
+.. .+|.|..+.+.+.+|+...+. .....+ +.+.++.+...++.+ +|.|+++||++. .+.+..++ .+.
T Consensus 89 ~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~ 167 (226)
T 1a8l_A 89 KDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG 167 (226)
T ss_dssp BCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT
T ss_pred ceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc
Confidence 664 789999999999999988763 234444 567777776666666 999999999974 34555555 333
Q ss_pred -CceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 207 -SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 207 -~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++.|+.+ .+.+++++|++.. +|++++|+.+. ....|.|..+.++|.+||+..
T Consensus 168 ~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 168 KGKILGDMVEAIEYPEWADQYNVMA---VPKIVIQVNGE-DRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCCEEEEEEEGGGCHHHHHHTTCCS---SCEEEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred CCcEEEEEEEcccCHHHHHhCCCcc---cCeEEEEeCCc-eeEEEcCCCCHHHHHHHHHHh
Confidence 47777765 5678999999986 99999998653 556788999999999999764
No 14
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.93 E-value=2.4e-24 Score=186.79 Aligned_cols=192 Identities=11% Similarity=0.146 Sum_probs=154.0
Q ss_pred hcHHHHh--cCCCcEEEEEe-----cCCChhHHhhHHHHHHHHHHh--cCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 64 KNFSEFM--GKNRNVMVMFY-----ANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 64 ~~~~~~~--~~~~~~lv~F~-----a~wC~~C~~~~p~~~~~~~~~--~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+.++..+ ...++++|.|| +|||++|+.+.|.|.++++.+ .+++.++.|||++++++|++|||+++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 3444445 34556665555 999999999999999999888 55899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHhc--CCcccCCCHHHHHHhhccCCeE-EEEEEcCCCCcc---HHHHHHHhccCCc
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGME---SEELAAASKLHSD 208 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~-~v~f~~~~~~~~---~~~~~~~a~~~~~ 208 (378)
++|+...+|.|.++.+.+.+|+...+. ..+..+ +.+.++.+...++.+ ++.|+++||++. .+.+..++...++
T Consensus 89 ~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~ 167 (229)
T 2ywm_A 89 GDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-SEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDY 167 (229)
T ss_dssp SSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-CHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTT
T ss_pred CCCcccceecCCccHHHHHHHHHHHHhccCCccCC-CHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCC
Confidence 987788999999999999999988763 445555 567788777665555 778999999974 4456666644467
Q ss_pred eeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 209 ~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.|..+ .+++++++|++.. +|++++ ++ +...|.|..+.++|.+||...
T Consensus 168 v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~--~G--~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 168 ITSKVIDASENQDLAEQFQVVG---VPKIVI--NK--GVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp EEEEEEEGGGCHHHHHHTTCCS---SSEEEE--GG--GTEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHcCCcc---cCEEEE--CC--EEEEeeCCCCHHHHHHHHHHH
Confidence 888765 5678999999986 999998 33 345589999999999999764
No 15
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.92 E-value=1.6e-24 Score=175.83 Aligned_cols=137 Identities=21% Similarity=0.303 Sum_probs=124.8
Q ss_pred CCCccccCCChhhhhhhccCCCCCCCcccCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC
Q 017071 26 TQSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE 105 (378)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~ 105 (378)
..+|...+.+|.......+.++......-...++++++++|++.+.++++++|+|||+||++|+.+.|.|++++++++++
T Consensus 17 c~~c~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~ 96 (155)
T 2ppt_A 17 CLACGQANKVPSDRLAAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ 96 (155)
T ss_dssp CTTTCCEEEEEGGGTTSCCBCTTTCCBSCCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccccccCCcccccCCCCCCcCCccccCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC
Confidence 35678888899888888888888666666778999999999998878899999999999999999999999999999888
Q ss_pred cEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 106 ADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 106 ~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
+.|+.||++++++++++|+|+++||+++|++|+.+.++.|..+.+.|.+||.+.++.
T Consensus 97 v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 97 VRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp CEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999998754
No 16
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.92 E-value=2.5e-24 Score=173.58 Aligned_cols=137 Identities=19% Similarity=0.346 Sum_probs=125.7
Q ss_pred CCCccccCCChhhhhhhccCCCCCCCcccCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC
Q 017071 26 TQSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE 105 (378)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~ 105 (378)
..+|...+.+|.......+.++..........+..+++++|+..+.++++++|+|||+||++|+.+.|.|+++++.++++
T Consensus 8 c~~c~~~n~~p~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~ 87 (148)
T 3p2a_A 8 CTACMATNRLPEERIDDGAKCGRCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK 87 (148)
T ss_dssp CTTTCCEEEEESSCSCSCCBCTTTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT
T ss_pred CcccccccCCCCcccccCCcchhcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc
Confidence 45677778888777777777777777777889999999999999989999999999999999999999999999999889
Q ss_pred cEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 106 ADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 106 ~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
+.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.|.+||++.++.
T Consensus 88 ~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 88 VRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred eEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999998854
No 17
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.92 E-value=4.8e-24 Score=160.77 Aligned_cols=99 Identities=22% Similarity=0.429 Sum_probs=89.3
Q ss_pred EEc-ChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 59 VSL-NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 59 ~~l-~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.++ +.++|++.+. ++++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|+++||+++|+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~ 81 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFMK 81 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEEE
Confidence 344 4578988773 47899999999999999999999999999887 6899999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 136 AGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+|+.+.++.|. +.+.|.++|+++
T Consensus 82 ~G~~v~~~~G~-~~~~l~~~i~k~ 104 (105)
T 3zzx_A 82 NGQKLDSLSGA-NYDKLLELVEKN 104 (105)
T ss_dssp TTEEEEEEESC-CHHHHHHHHHHH
T ss_pred CCEEEEEEeCc-CHHHHHHHHHhc
Confidence 99999999994 899999999864
No 18
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.91 E-value=2.6e-24 Score=186.05 Aligned_cols=183 Identities=17% Similarity=0.253 Sum_probs=157.8
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCccHHHHHHHhccCCceeEEEEccHHHHhhcCCCCCCCCCeEEEeecCC
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEA 241 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~ 241 (378)
..+.++.+.++++++++++++++|+||+++|++.++.|.++|....++.|+++.+++++++++++. |+|++|+..+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~----p~i~lfk~~~ 84 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTICLFRLVD 84 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS----SEEEEEETTT
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC----CeEEEEEecC
Confidence 356788999999999999999999999999999999999999544799999999999999999985 9999999877
Q ss_pred CCccccCC----CCCHHHHHHHHHhcCCCceEEecccchhhhhccchH-HH-----------------------------
Q 017071 242 GKATPFRH----QFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK-QL----------------------------- 287 (378)
Q Consensus 242 ~~~~~y~g----~~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~~~-~l----------------------------- 287 (378)
+.+..|+| +++.++|.+||+.++.|++.+++.+|+..++..+.| ++
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i 164 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKI 164 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTC
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCE
Confidence 77888985 789999999999999999999999998876655433 11
Q ss_pred HHHhhhcCcchhhhhhHhhcCCCCCCCcEEEEEcC-CCccccCC-CCCCHHHHHHHHHHHhcCc
Q 017071 288 LHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN-GELTLSSIKSFGEEFLEDK 349 (378)
Q Consensus 288 ~f~~~d~~~~~~~~~l~~~~gi~~~~~p~i~i~~~-~~~~y~~~-~~~~~~~i~~Fi~~~~~Gk 349 (378)
.|+++|++...+. ++++.||++....|+++|.+. ++++|.++ ++++.++|.+|++++++||
T Consensus 165 ~F~~vd~~~~~~~-~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 165 LFILVDSGMKENG-KVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp EEEEEETTSGGGH-HHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred EEEEeCCccHhHH-HHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 5777777765644 456999998778999999998 56678875 6899999999999999997
No 19
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.91 E-value=3.3e-23 Score=192.05 Aligned_cols=205 Identities=12% Similarity=0.184 Sum_probs=165.8
Q ss_pred CCcEEcChhcHHHHhcCC-CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc--CcHHHHHHcCCCC--CcE
Q 017071 56 KDVVSLNGKNFSEFMGKN-RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILA--YPT 130 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~-~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~--~Pt 130 (378)
..+..++.+++.+....+ ++++|.||++||++|+++.|.|+++|+++++++.|+.|||+ +++.+|+.|||.+ +|+
T Consensus 117 p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~ 196 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPA 196 (361)
T ss_dssp CSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSE
T ss_pred CcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCcc
Confidence 457889999999888554 57799999999999999999999999999999999999999 7899999999988 999
Q ss_pred EEEEeCCeEeeeee---CCCCHHHHHHHHHHHhcCC------------------cccCCCHHHHHHhh-ccCCeEEEEEE
Q 017071 131 LYLFVAGVRQFQFF---GERTRDVISAWVREKMTLG------------------TYSITTTDEAERIL-TVESKLVLGFL 188 (378)
Q Consensus 131 ~~~~~~g~~~~~~~---g~~~~~~l~~~i~~~~~~~------------------~~~i~~~~~~~~~~-~~~~~~~v~f~ 188 (378)
+++++.|+...+|. |..+.+.|.+|+.+.+... +..+ +.+++++++ ..++.++|.|+
T Consensus 197 ~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l-~~~~f~~~~~~~~k~~lv~f~ 275 (361)
T 3uem_A 197 VRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVL-VGKNFEDVAFDEKKNVFVEFY 275 (361)
T ss_dssp EEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEE-CTTTHHHHHTCTTCEEEEEEE
T ss_pred EEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEe-ecCchhhhcccCCCcEEEEEe
Confidence 99999765666776 7899999999999987422 3334 345666665 56789999999
Q ss_pred cCCCCcc---HHHHHHHh-ccCC--ceeEEEEc-cHHHHhhcCCCCCCCCCeEEEeecC-CCCccccCCCCCHHHHHHHH
Q 017071 189 HDLEGME---SEELAAAS-KLHS--DVNFYQTT-SADVAEFFHIHPKSKRPALIFLHLE-AGKATPFRHQFTRLAIANFV 260 (378)
Q Consensus 189 ~~~~~~~---~~~~~~~a-~~~~--~~~f~~~~-~~~~~~~~~i~~~~~~P~i~~~~~~-~~~~~~y~g~~~~~~l~~fi 260 (378)
++||++. .+.+.+++ .+.+ ++.++.+. +...+++|++.. +|++++|+.+ +.....|.|.++.++|.+||
T Consensus 276 a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~---~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l 352 (361)
T 3uem_A 276 APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHS---FPTLKFFPASADRTVIDYNGERTLDGFKKFL 352 (361)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCS---SSEEEEECSSSSCCCEECCSCSSHHHHHHHH
T ss_pred cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcc---cCeEEEEECCCCcceeEecCCCCHHHHHHHH
Confidence 9999974 44566666 4444 47777552 333378899986 9999999766 44678999999999999999
Q ss_pred HhcC
Q 017071 261 THTK 264 (378)
Q Consensus 261 ~~~~ 264 (378)
+++.
T Consensus 353 ~~~~ 356 (361)
T 3uem_A 353 ESGG 356 (361)
T ss_dssp TTTS
T ss_pred HhcC
Confidence 9874
No 20
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.91 E-value=6.9e-24 Score=164.59 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=97.9
Q ss_pred CCcEEcChhcHHHHhcCCC-cEEEEEecCCC--hhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 56 KDVVSLNGKNFSEFMGKNR-NVMVMFYANWC--YWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~-~~lv~F~a~wC--~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
.....+|+++|++.+.+++ +++|.|||+|| ++|+.+.|.+++++++|.+++.|++||.|++++++++|||+++||++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 4566899999998886555 99999999999 99999999999999999989999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|++|+.+.+..|..+.+.|.++|.+.+
T Consensus 95 lFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999998877
No 21
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.91 E-value=1.8e-22 Score=193.51 Aligned_cols=204 Identities=16% Similarity=0.247 Sum_probs=152.1
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC---CcEEEEEeCc--CcHHHHHHcCCCC
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAY--LEKDLAKEYNILA 127 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~--~~~~~~~~~~v~~ 127 (378)
....+..+++++|+..+ .++++++|+|||+||++|++++|.|+++++++++ .+.|+.|||+ +++++|++|+|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 34579999999999877 5679999999999999999999999999999987 7999999995 4899999999999
Q ss_pred CcEEEEEe----CCeEeeeeeCCCCHHHHHHHHHHHhcCCc---------ccCCCHHHHHHhhccC--CeEEEEEEcCCC
Q 017071 128 YPTLYLFV----AGVRQFQFFGERTRDVISAWVREKMTLGT---------YSITTTDEAERILTVE--SKLVLGFLHDLE 192 (378)
Q Consensus 128 ~Pt~~~~~----~g~~~~~~~g~~~~~~l~~~i~~~~~~~~---------~~i~~~~~~~~~~~~~--~~~~v~f~~~~~ 192 (378)
+||+++|+ +|+....+.|..+.+.|.++|.+.+.... ....+.++++.++..+ ...++.|. +..
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~-~~~ 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFE-RED 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEE-CTT
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEec-CCc
Confidence 99999999 45556678888999999999999885322 1223567888887653 34444444 434
Q ss_pred CccHHHHHHHhccCCceeEEEE--ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCC-CHHHHHHHHHh
Q 017071 193 GMESEELAAASKLHSDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVTH 262 (378)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~--~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~-~~~~l~~fi~~ 262 (378)
+.....+...-.....+.+..+ .+.+++++|||+. +|+++++.+++ +...++... ....+..+++.
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~---~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTD---FPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCC---CCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 4333333222233345555544 4579999999997 99999998864 444444333 23556677765
No 22
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.91 E-value=1.1e-23 Score=195.18 Aligned_cols=212 Identities=20% Similarity=0.340 Sum_probs=182.6
Q ss_pred hcCCcccCCCHHHHHHhhccCCeEEEEEEcCCCCccHHHHHHHhccCCceeEEEEccHHHHhhcCCCCCCCCCeEEEeec
Q 017071 160 MTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHL 239 (378)
Q Consensus 160 ~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~ 239 (378)
....+..|++.++++++++.++.++|+||.+.++...+.|.++|...+++.|+++.+++++++++++. |+|++|+.
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~----~~i~lfk~ 90 (361)
T 3uem_A 15 GSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDK----DGVVLFKK 90 (361)
T ss_dssp CCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEECCHHHHHHTTCSS----SEEEEEES
T ss_pred ccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEECcHHHHHHhCCCC----CeEEEEEe
Confidence 34677889999999999999999999999998889999999999555899999999999999999985 99999999
Q ss_pred CCCCccccCCCCCHHHHHHHHHhcCCCceEEecccchhhhhccchH-HH-----------------------------HH
Q 017071 240 EAGKATPFRHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK-QL-----------------------------LH 289 (378)
Q Consensus 240 ~~~~~~~y~g~~~~~~l~~fi~~~~~P~~~~l~~~~~~~~~~~~~~-~l-----------------------------~f 289 (378)
.++.+..|+|+++.++|.+||+.+..|++.+++++++..++..+.+ ++ .|
T Consensus 91 f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f 170 (361)
T 3uem_A 91 FDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILF 170 (361)
T ss_dssp STTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEE
T ss_pred cCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEE
Confidence 8788999999999999999999999999999999998887765432 11 46
Q ss_pred HhhhcCcchhhhhhHhhcCCCCCCCcEEEEEcC--CCccccCC-CCCCHHHHHHHHHHHhcCce--eeeccCCchh----
Q 017071 290 VYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR--DAKKYVLN-GELTLSSIKSFGEEFLEDKL--LNQSDQISET---- 360 (378)
Q Consensus 290 ~~~d~~~~~~~~~l~~~~gi~~~~~p~i~i~~~--~~~~y~~~-~~~~~~~i~~Fi~~~~~Gkl--~~kSe~~p~~---- 360 (378)
+++|++... ..++++.||++....|.+++++. ...+|.++ +.++.++|.+|++++++|++ +.+|+++|+.
T Consensus 171 ~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~ 249 (361)
T 3uem_A 171 IFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 249 (361)
T ss_dssp EEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTS
T ss_pred EEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccC
Confidence 667766434 45788999998777899999887 34678765 68999999999999999999 8999999986
Q ss_pred -hhccCCccccceeeec
Q 017071 361 -ILKLPSQSRASYQLRT 376 (378)
Q Consensus 361 -~~~~v~~~~~~~~~~~ 376 (378)
+..++++||+++++..
T Consensus 250 ~v~~l~~~~f~~~~~~~ 266 (361)
T 3uem_A 250 PVKVLVGKNFEDVAFDE 266 (361)
T ss_dssp SSEEECTTTHHHHHTCT
T ss_pred CcEEeecCchhhhcccC
Confidence 7788999999987643
No 23
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.91 E-value=4.7e-24 Score=166.17 Aligned_cols=109 Identities=6% Similarity=0.086 Sum_probs=100.5
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCC--ChhHHhhHHHHHHHHHHhcCC-cEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~w--C~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
.+..+|+++|++.+.++++++|.|||+| |++|+.+.|.+++++++|.++ +.|++||+|++++++++|||+++||+++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlil 97 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLV 97 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 6678999999988878889999999999 999999999999999999988 9999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcc
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTY 165 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 165 (378)
|++|+.+.+..|..+.+.|.++|.+.+..+..
T Consensus 98 Fk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 98 FTGGNYRGVLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHC----
T ss_pred EECCEEEEEEecCCCHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998854443
No 24
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.90 E-value=5.9e-23 Score=156.91 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=100.9
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
..+..+++++|++.+ .++++++|.|||+||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEE
Confidence 468899999999988 7889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++|+.+.++.|..+.+.+.+||.+.++
T Consensus 84 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 84 KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 25
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.90 E-value=3e-23 Score=162.67 Aligned_cols=106 Identities=17% Similarity=0.328 Sum_probs=96.0
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc-----CCcEEEEEeCcCcHHHHHHcCCCC
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLAKEYNILA 127 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~-----~~~~~~~vd~~~~~~~~~~~~v~~ 127 (378)
....+..|++++|++.+ .++++++|+|||+||++|+.+.|.|+++++.+. +++.++.|||++++++|++|+|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 44689999999999888 468999999999999999999999999998764 379999999999999999999999
Q ss_pred CcEEEEEeCCeEe--eeeeCCCCHHHHHHHHHHH
Q 017071 128 YPTLYLFVAGVRQ--FQFFGERTRDVISAWVREK 159 (378)
Q Consensus 128 ~Pt~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~ 159 (378)
+||+++|++|+.. .+|.|.++.+.|.+||.+.
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999977543 6899999999999999875
No 26
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.90 E-value=5.2e-23 Score=157.59 Aligned_cols=107 Identities=21% Similarity=0.358 Sum_probs=100.5
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeC
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (378)
.++++++++|++.+ ++++++|+|||+||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||++++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 80 (112)
T 2voc_A 2 AIVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKD 80 (112)
T ss_dssp CCEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEET
T ss_pred CeEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeC
Confidence 36789999999988 89999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeEeeeeeCCCCHHHHHHHHHHHhcCCc
Q 017071 137 GVRQFQFFGERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (378)
|+.+.++.|..+.+.|.+|+.+.++++-
T Consensus 81 G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 108 (112)
T 2voc_A 81 GEVVETSVGFKPKEALQELVNKHLLEHH 108 (112)
T ss_dssp TEEEEEEESCCCHHHHHHHHHTTSCSCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999998886543
No 27
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.90 E-value=3e-23 Score=163.32 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=92.8
Q ss_pred cEEcC-hhcHHHHh--cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 58 VVSLN-GKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 58 v~~l~-~~~~~~~~--~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+..++ .++|++.+ .++++|+|.|||+||++|+.+.|.++++++++++++.|++||+|++++++++|+|+++||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 44554 57898776 3688999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEe--e-------eeeCCCC-HHHHHHHHHHHh
Q 017071 135 VAGVRQ--F-------QFFGERT-RDVISAWVREKM 160 (378)
Q Consensus 135 ~~g~~~--~-------~~~g~~~-~~~l~~~i~~~~ 160 (378)
++|+.+ . +..|..+ .++|.++|+..+
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999877 4 7899887 999999998776
No 28
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.89 E-value=1.4e-22 Score=154.24 Aligned_cols=105 Identities=25% Similarity=0.424 Sum_probs=100.5
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
..+..+++++|+..+.++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 83 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFV 83 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEc
Confidence 47789999999999988999999999999999999999999999999989999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|+.+.++.|..+.+.|.++|++++
T Consensus 84 ~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 84 NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999999999999999999998875
No 29
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.89 E-value=1.8e-22 Score=161.02 Aligned_cols=114 Identities=31% Similarity=0.502 Sum_probs=104.9
Q ss_pred cccCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC---cEEEEEeCcCcHHHHHHcCCCCC
Q 017071 52 LLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAY 128 (378)
Q Consensus 52 ~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~ 128 (378)
......+..+++++|++.+.++++++|+|||+||++|+++.|.|+++++.+++. +.++.||++++.+++++|+|.++
T Consensus 13 ~~~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 92 (140)
T 2dj1_A 13 VKEENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGY 92 (140)
T ss_dssp CEEETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSS
T ss_pred cCCCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCcc
Confidence 334568999999999999988999999999999999999999999999999874 99999999999999999999999
Q ss_pred cEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCCccc
Q 017071 129 PTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYS 166 (378)
Q Consensus 129 Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 166 (378)
||+++|++|+ +.++.|..+.+.|.+||.++++++...
T Consensus 93 Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 93 PTIKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp SEEEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred CeEEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 9999999997 789999999999999999999766543
No 30
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.89 E-value=1.5e-22 Score=153.24 Aligned_cols=103 Identities=21% Similarity=0.362 Sum_probs=98.2
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
..+.++++++|++.+ ++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 467899999999998 8999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 136 AGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+|+.+.++.|..+.+.+.++|.++
T Consensus 82 ~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 82 DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 999999999999999999999865
No 31
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.89 E-value=2.2e-22 Score=152.97 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=98.4
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+.++.+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 468899999999655 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++|+.+.++.|..+.+.|.++|.+.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 99999999999999999999998875
No 32
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.89 E-value=1.5e-22 Score=153.01 Aligned_cols=103 Identities=21% Similarity=0.420 Sum_probs=97.1
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCC
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (378)
++++++++|+..+.++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 81 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCC
Confidence 67899999998888899999999999999999999999999999987899999999999999999999999999999999
Q ss_pred eEeeeeeCCCCHHHHHHHHHHHh
Q 017071 138 VRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+.+.++.|..+.+.+.+++.+.+
T Consensus 82 ~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 82 RPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEEEEESCCCHHHHHHHTTTTT
T ss_pred eEEEEEecCCCHHHHHHHHHHHh
Confidence 98999999999999999987654
No 33
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.89 E-value=1e-22 Score=156.94 Aligned_cols=103 Identities=24% Similarity=0.342 Sum_probs=96.0
Q ss_pred CCcEEcChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 56 KDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
......+.++|++.+. ++++++|+|||+||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++||+++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~ 90 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQF 90 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEEEE
Confidence 4556788999999887 899999999999999999999999999999985 9999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++|+.+.++.|. +.+.|.++|.+++
T Consensus 91 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 91 FKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp ESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 9999999999999 9999999998763
No 34
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.89 E-value=4.6e-22 Score=154.02 Aligned_cols=109 Identities=25% Similarity=0.368 Sum_probs=100.4
Q ss_pred cccCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 52 LLYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 52 ~~~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
....+.+..+++++|++.+ .++++++|+||++||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||
T Consensus 9 ~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 88 (119)
T 1w4v_A 9 HHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPT 88 (119)
T ss_dssp -CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccE
Confidence 3345678899999999765 678999999999999999999999999999998789999999999999999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 131 LYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++++++|+.+.++.|..+.+.|.++|++.+
T Consensus 89 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 89 VLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 999999998999999999999999998876
No 35
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=157.65 Aligned_cols=108 Identities=35% Similarity=0.573 Sum_probs=100.8
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc----CCcEEEEEeCcCcHHHHHHcCCCCC
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAY 128 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~~vd~~~~~~~~~~~~v~~~ 128 (378)
....+..+++++|++.+ .++++++|+|||+||++|+.+.|.++++++.++ +++.|+.||++++++++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 34678999999999876 678999999999999999999999999999997 6899999999999999999999999
Q ss_pred cEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 129 PTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 129 Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
||+++|++|+.+.++.|.++.+.|.+|+.+.+.
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 999999999889999999999999999999874
No 36
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.88 E-value=3e-22 Score=159.73 Aligned_cols=107 Identities=21% Similarity=0.371 Sum_probs=100.9
Q ss_pred CCCcEEcChhcHH-HHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 55 AKDVVSLNGKNFS-EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 55 ~~~v~~l~~~~~~-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
...+..+++++|+ ..+.++++++|+|||+||++|+.+.|.|+++++.+++++.|+.||++++++++++|+|.++||+++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 4578999999999 555789999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
|++|+.+.++.|..+.+.|.+||.+.+.
T Consensus 85 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999998874
No 37
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.88 E-value=4.7e-22 Score=151.20 Aligned_cols=105 Identities=24% Similarity=0.438 Sum_probs=99.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeC
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (378)
.++++++++|+..+.++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKD 81 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC
Confidence 57889999999888889999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 137 GVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
|+.+.++.|..+.+.+.+|+.+.++
T Consensus 82 g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 82 GQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp TEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred CcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 9988999999999999999998764
No 38
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.88 E-value=7.8e-22 Score=150.96 Aligned_cols=106 Identities=19% Similarity=0.390 Sum_probs=98.5
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
..+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 457899999998655 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++|+.+.++.|..+.+.+.++|.+.+.
T Consensus 85 ~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 85 QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999988763
No 39
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.88 E-value=2.7e-22 Score=171.41 Aligned_cols=116 Identities=20% Similarity=0.418 Sum_probs=108.5
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
+...+..+++++|+..+.++++++|+|||+||++|+.+.|.|+++++.+++++.|+.|||+++++++++|+|.++||+++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 45678999999999988889999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCCC
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITT 169 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~ 169 (378)
|++|+.+.++.|..+.+.|.+||.+.+...+.+|++
T Consensus 175 ~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp ECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred EECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 999988999999999999999999999988888753
No 40
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.88 E-value=7.6e-22 Score=149.58 Aligned_cols=104 Identities=21% Similarity=0.400 Sum_probs=97.6
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+.++.+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 468899999999766 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
++|+.+.++.|..+.+.+.+||.+.
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred eCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999999999999999999999864
No 41
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.88 E-value=5.9e-22 Score=158.04 Aligned_cols=134 Identities=21% Similarity=0.234 Sum_probs=85.5
Q ss_pred CCccccCCChhhhhhhccCCCCCCCcccCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCc
Q 017071 27 QSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEA 106 (378)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~ 106 (378)
.+|...+.++.........++.+.+.. +.+.++++++|+..+.+++.++|+||++||++|+.+.|.++++++++++++
T Consensus 6 ~~~~~~~~~~~~r~~~~~~~~~c~~~~--~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v 83 (140)
T 1v98_A 6 PKCGAKNRLGTPPPGQVPVCGACKTPL--PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRL 83 (140)
T ss_dssp ---------------------------------------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTE
T ss_pred ccccccccCCcccccCCcccccccCCC--CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCce
Confidence 345555656655544433333333322 678899999999887555559999999999999999999999999998789
Q ss_pred EEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 107 DLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 107 ~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.+.+||.+.++.
T Consensus 84 ~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 84 KVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999988753
No 42
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=7.3e-22 Score=154.52 Aligned_cols=110 Identities=25% Similarity=0.424 Sum_probs=99.7
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
...++.+++++|++.+.+ .++|+|||+||++|+++.|.++++++.+++ ++.++.||++++++++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 457899999999987743 399999999999999999999999999986 89999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccC
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSI 167 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i 167 (378)
|++|+ +.++.|..+.+.|.+||.+.+...+..+
T Consensus 84 ~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 84 CKDGE-FRRYQGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp EETTE-EEECCSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred EeCCe-EEEeecCCCHHHHHHHHHHHhhccCCCc
Confidence 99997 5899999999999999999886665544
No 43
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.88 E-value=4.6e-22 Score=155.99 Aligned_cols=105 Identities=21% Similarity=0.405 Sum_probs=98.6
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
..++.+++++|++.+ .++++++|+|||+||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 468899999999655 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++|+.+.++.|..+.+.|.+||++.+
T Consensus 102 ~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 99999999999999999999998875
No 44
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.88 E-value=6.8e-22 Score=150.93 Aligned_cols=103 Identities=28% Similarity=0.524 Sum_probs=96.8
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC---CcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
+.+..+++++|++.+. +++++|+||++||++|+.+.|.++++++.+.. ++.++.||++++++++++|+|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 5788999999999887 88999999999999999999999999998753 7999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
++++|+.+.++.|..+.+.|.+||.+.
T Consensus 84 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999999999999999999999875
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.88 E-value=1e-21 Score=147.97 Aligned_cols=103 Identities=24% Similarity=0.448 Sum_probs=97.4
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCC
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (378)
|+++++++|++.+.++++++|.||++||++|+.+.|.++++++.+++ +.++.+|++++++++++|+|.++||++++++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 79 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDG 79 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEETT
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEECC
Confidence 46789999999988899999999999999999999999999999986 99999999999999999999999999999999
Q ss_pred eEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 138 VRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+.+.++.|..+.+.+.+|+.+.++
T Consensus 80 ~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 80 EPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred eEhhhccCCCCHHHHHHHHHHHhc
Confidence 989999999999999999998764
No 46
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.88 E-value=8.9e-22 Score=149.28 Aligned_cols=104 Identities=23% Similarity=0.383 Sum_probs=97.2
Q ss_pred CcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 46789999999866 67899999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|+.+.++.|..+.+.+.++|.+.+
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999998765
No 47
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.88 E-value=1.2e-21 Score=149.18 Aligned_cols=102 Identities=25% Similarity=0.364 Sum_probs=94.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeC
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (378)
.....+.++|++.+.++++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++||++++++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 86 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 86 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCccCEEEEEEC
Confidence 34456789999999899999999999999999999999999999987 59999999999999999999999999999999
Q ss_pred CeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 137 GVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
|+.+.++.|. +.+.|.++|.+++
T Consensus 87 G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 87 GKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CEEEEEEeCC-CHHHHHHHHHhhC
Confidence 9999999999 7799999998753
No 48
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.88 E-value=1.6e-21 Score=149.77 Aligned_cols=106 Identities=19% Similarity=0.330 Sum_probs=99.8
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
..+.++++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV 86 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE
Confidence 468999999999775 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++|+.+.++.|..+.+.+.+||.+.++
T Consensus 87 ~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 87 KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999998874
No 49
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.87 E-value=1.5e-22 Score=153.14 Aligned_cols=98 Identities=9% Similarity=0.116 Sum_probs=80.4
Q ss_pred ChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEee
Q 017071 62 NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQF 141 (378)
Q Consensus 62 ~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~ 141 (378)
+.++|++.+.++++++|+|||+||++|+.+.|.+++++++++ ++.++.||++++++++++|+|.++||+++|++|+.+.
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~ 85 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEIL 85 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEE
Confidence 445677677789999999999999999999999999999985 7999999999999999999999999999999999999
Q ss_pred eeeCCCCHHHHHHHHHHHh
Q 017071 142 QFFGERTRDVISAWVREKM 160 (378)
Q Consensus 142 ~~~g~~~~~~l~~~i~~~~ 160 (378)
++.|..+.+.|.++|++++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 9999999999999998764
No 50
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.87 E-value=2.2e-21 Score=147.20 Aligned_cols=102 Identities=23% Similarity=0.286 Sum_probs=91.3
Q ss_pred cEEc-ChhcHHHHh--cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 58 VVSL-NGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 58 v~~l-~~~~~~~~~--~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+..+ +.++|++.+ .++++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++||++++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 4455 568899888 578999999999999999999999999999984 799999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++|+.+.++.|.. .++|.++|.+.++
T Consensus 82 ~~G~~~~~~~G~~-~~~l~~~l~~~lg 107 (107)
T 1gh2_A 82 RNKVRIDQYQGAD-AVGLEEKIKQHLE 107 (107)
T ss_dssp ETTEEEEEEESSC-HHHHHHHHHHHHC
T ss_pred ECCeEEEEEeCCC-HHHHHHHHHHhcC
Confidence 9999999999965 4569999988763
No 51
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.87 E-value=2.4e-21 Score=146.30 Aligned_cols=103 Identities=26% Similarity=0.462 Sum_probs=96.1
Q ss_pred cEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeC
Q 017071 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 58 v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (378)
+.++++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|+|.++||++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 5688999999866 568899999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 137 GVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
|+.+.++.|..+.+.+.++|.+++
T Consensus 82 g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 82 GERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp TEEEEEEEECCCHHHHHHHHHHHC
T ss_pred CeEEEEEecCCCHHHHHHHHHhhC
Confidence 999999999999999999998753
No 52
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=1.2e-21 Score=154.05 Aligned_cols=108 Identities=28% Similarity=0.461 Sum_probs=99.0
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
....+..++.++|+..+ .++++++|+|||+||++|+.+.|.++++++.+++.+.++.||++++.+++++|+|.++||++
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 44678999999999855 67899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCeE-eeeeeCCCCHHHHHHHHHHHhc
Q 017071 133 LFVAGVR-QFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 133 ~~~~g~~-~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+|++|+. +.++.|..+.+.+.+|+.+.+.
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9996654 7899999999999999998764
No 53
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.87 E-value=2.5e-21 Score=153.62 Aligned_cols=108 Identities=23% Similarity=0.362 Sum_probs=98.4
Q ss_pred CCCcEEcChhcHHHHhc------------CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHH
Q 017071 55 AKDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKE 122 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~------------~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~ 122 (378)
...++.++.++|++.+. ++++++|+|||+||++|+++.|.++++++++++++.++.||++++++++++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 45788999999998774 468999999999999999999999999999988899999999999999999
Q ss_pred cCCCCCcEEEEE-eCCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 123 YNILAYPTLYLF-VAGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 123 ~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
|+|.++||+++| .+|+.+ ++.|..+.+.|.++|.+.++..
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTSC
T ss_pred cCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhcc
Confidence 999999999999 588765 8999999999999999987543
No 54
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.87 E-value=2.7e-21 Score=150.87 Aligned_cols=105 Identities=18% Similarity=0.296 Sum_probs=97.3
Q ss_pred CCCcEEcCh-hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 55 AKDVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 55 ~~~v~~l~~-~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
..-+..+++ ++|++.+.++++++|.|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||+++
T Consensus 18 ~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 334889998 9999998889999999999999999999999999999985 69999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+++|+.+.++.| .+.+.|.++|.+.+.
T Consensus 97 ~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 ARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 999999999999 688999999988763
No 55
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.87 E-value=2.7e-21 Score=147.74 Aligned_cols=105 Identities=21% Similarity=0.326 Sum_probs=95.7
Q ss_pred cCCCcEEcChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-CcHHHHHHcCCCCCcE
Q 017071 54 YAKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPT 130 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt 130 (378)
..+.+..+++++|++.+. ++++++|+|||+||++|+.+.|.++++++.++ ++.++.||++ ++++++++|+|.++||
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCcchHHHHHHcCCCeeeE
Confidence 346789999999999885 58999999999999999999999999999987 5999999998 7899999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 131 LYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++++++|+.+.++.|.. .+.|.++|.+.+
T Consensus 82 ~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 82 FKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp EEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 98888999889999985 899999998765
No 56
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.87 E-value=1.3e-21 Score=156.22 Aligned_cols=109 Identities=20% Similarity=0.392 Sum_probs=96.5
Q ss_pred cccCCCcEEcChhcHHHHhc------------CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHH
Q 017071 52 LLYAKDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDL 119 (378)
Q Consensus 52 ~~~~~~v~~l~~~~~~~~~~------------~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~ 119 (378)
......++.++.++|+..+. ++++++|+|||+||++|+.+.|.++++++.+++++.++.||+++++++
T Consensus 18 ~~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 18 EKPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97 (141)
T ss_dssp -----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred cCCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHH
Confidence 33556899999999998885 379999999999999999999999999999998899999999999999
Q ss_pred HHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 120 AKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 120 ~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+++|+|.++||+++|+ +|+. .++.|..+.+.|.++|.+++.
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~~-~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEP-QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCC-EEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCcCEEEEEeCCCCE-EEEeCCCCHHHHHHHHHHHHc
Confidence 9999999999999996 6654 489999999999999998764
No 57
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.87 E-value=2.5e-21 Score=148.06 Aligned_cols=104 Identities=24% Similarity=0.416 Sum_probs=95.8
Q ss_pred CcEEc-ChhcHHHHhcC----CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEE
Q 017071 57 DVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 57 ~v~~l-~~~~~~~~~~~----~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (378)
.+..+ +.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 56777 56889988864 89999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+++++|+.+.++.|. +.+.+.++|.+.+.
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 999999999999998 99999999998763
No 58
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.87 E-value=2.7e-22 Score=155.34 Aligned_cols=109 Identities=37% Similarity=0.623 Sum_probs=101.1
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC---CcEEEEEeCcCcHHHHHHcCCCCCcEE
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (378)
.+.+..+++++|++.+.++++++|.||++||++|+.+.|.++++++.+++ ++.++.||++++++++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 45789999999999988899999999999999999999999999999874 699999999999999999999999999
Q ss_pred EEEeCCeEe--eeeeCCCCHHHHHHHHHHHhcCC
Q 017071 132 YLFVAGVRQ--FQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 132 ~~~~~g~~~--~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
++|++|+.+ .++.|..+.+.|.+||.+.++++
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999999876 89999999999999999888654
No 59
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.87 E-value=1.1e-21 Score=152.67 Aligned_cols=108 Identities=27% Similarity=0.430 Sum_probs=97.2
Q ss_pred CCcEEcChhcHHH-HhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 56 KDVVSLNGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 56 ~~v~~l~~~~~~~-~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+.+..+++++|+. .+.++++++|.|||+||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 82 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 82 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEE
Confidence 4688999999964 557889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeeeeeCC----CCHHHHHHHHHHHhcCC
Q 017071 135 VAGVRQFQFFGE----RTRDVISAWVREKMTLG 163 (378)
Q Consensus 135 ~~g~~~~~~~g~----~~~~~l~~~i~~~~~~~ 163 (378)
++|+.+.++.|. .+.+.|.+|+.+.+...
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 83 QYERAKKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp EEEGGGTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred eCCCccceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 866567777776 89999999999987543
No 60
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.86 E-value=2.7e-21 Score=150.01 Aligned_cols=107 Identities=20% Similarity=0.374 Sum_probs=98.1
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
....+..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 34578899999999655 67899999999999999999999999999999878999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++++|+.+.++.|..+.+.+.++|.+.+
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999997665
No 61
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.86 E-value=3.6e-21 Score=147.25 Aligned_cols=103 Identities=16% Similarity=0.294 Sum_probs=90.7
Q ss_pred cEEcCh-hcHHHHhcC---CCcEEEEEecCCChhHHhhHHHHHHHHHHhc-CCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 58 VVSLNG-KNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 58 v~~l~~-~~~~~~~~~---~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
+..+++ ++|++.+.+ +++++|+|||+||++|+.+.|.+++++++++ .++.++.||++++++++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567787 899988865 8999999999999999999999999999863 37999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++++|+.+.++.|.. .++|.++|.+.+.
T Consensus 82 ~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIHKGTILKELSGAD-PKEYVSLLEDCKN 109 (112)
T ss_dssp EEETTEEEEEECSCC-HHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCC-HHHHHHHHHHHHh
Confidence 999999999999984 5569999988763
No 62
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.86 E-value=2e-21 Score=156.33 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=93.2
Q ss_pred cChhcHHHHh--cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCe
Q 017071 61 LNGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV 138 (378)
Q Consensus 61 l~~~~~~~~~--~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 138 (378)
.+.++|++.+ .++++++|+|||+||++|+.+.|.++++++++++.+.++.||++++++++++|+|.++||++++++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 4678899877 56899999999999999999999999999999878999999999999999999999999999999999
Q ss_pred Ee---------eeeeC-CCCHHHHHHHHHHHh
Q 017071 139 RQ---------FQFFG-ERTRDVISAWVREKM 160 (378)
Q Consensus 139 ~~---------~~~~g-~~~~~~l~~~i~~~~ 160 (378)
.+ .++.| ..+.++|.++|++..
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 88 89999 899999999998875
No 63
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.86 E-value=1.9e-20 Score=163.20 Aligned_cols=189 Identities=12% Similarity=0.085 Sum_probs=146.0
Q ss_pred hcHHHHhc-CCCcEEEEEecCC--ChhHHhhHHHHHHHHHHh---cCC--cEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 64 KNFSEFMG-KNRNVMVMFYANW--CYWSKKLAPEFAAAAKML---KGE--ADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 64 ~~~~~~~~-~~~~~lv~F~a~w--C~~C~~~~p~~~~~~~~~---~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
+.++..+. -.++++|.||++| |++|+.+.|.++++++.+ +++ +.|+.+|+++++++|++|||.++||+.++
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 34555553 3579999999999 999999999999999885 222 99999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHhc--CCcccCCCHHHHHHhhcc-CCeEEEEEEcCCCCccH---HHHHHHhccC---
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMES---EELAAASKLH--- 206 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~---~~~~~~a~~~--- 206 (378)
+| ..+|.|..+...+..|+...+. .....+ +.+..+.+.+. .+..++.|+++||++.. +.+..++...
T Consensus 94 ~g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 GG--EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp TT--TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred CC--ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 66 7889999888899999887652 222233 44455444332 55678889999999843 4455555322
Q ss_pred --CceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 207 --SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 207 --~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
.++.+..+ .+++++++|++.. +|++++ ++ + ..|.|..+.++|.+||....
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~~---vPt~~i--~G--~-~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVMS---VPSIAI--NG--Y-LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCCS---SSEEEE--TT--E-EEEESCCCHHHHHHHHHHHH
T ss_pred cCCcEEEEEEECccCHHHHHHcCCee---eCeEEE--CC--E-EEEeCCCCHHHHHHHHHHHh
Confidence 56777655 5678999999986 999987 32 3 34899999999999998764
No 64
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.86 E-value=4.6e-21 Score=146.68 Aligned_cols=103 Identities=19% Similarity=0.377 Sum_probs=96.4
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
+....++.++|++.+.++++++|+||++||++|+.+.|.+++++++++ ++.++.||++++++++++|+|.++||+++++
T Consensus 9 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 87 (112)
T 1syr_A 9 MVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTFKVYK 87 (112)
T ss_dssp CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEEEEEE
T ss_pred eEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEEEEEE
Confidence 466789999999999889999999999999999999999999999987 6999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|+.+.++.|. +.+.|.++|.+.+
T Consensus 88 ~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 88 NGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred CCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 99999999999 9999999998654
No 65
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.86 E-value=6.8e-21 Score=144.05 Aligned_cols=101 Identities=22% Similarity=0.418 Sum_probs=93.1
Q ss_pred cEEcCh-hcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 58 VVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 58 v~~l~~-~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
+..+++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456777 88988886 789999999999999999999999999999977899999999999999999999999999999
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
++|+.+.++.| .+.+.+.++|++.
T Consensus 82 ~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred cCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 99999999999 7899999999765
No 66
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.86 E-value=3.2e-21 Score=157.27 Aligned_cols=110 Identities=11% Similarity=0.219 Sum_probs=96.8
Q ss_pred CCCcEEcChhcHHHHhcC--CCcEEEEEec-------CCChhHHhhHHHHHHHHHHhc-----CCcEEEEEeCcCcHHHH
Q 017071 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYA-------NWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLA 120 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~a-------~wC~~C~~~~p~~~~~~~~~~-----~~~~~~~vd~~~~~~~~ 120 (378)
...++.||+++|++.+.. +.+++|.||| +||++|+.+.|.|+++|+++. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 357999999999998743 5579999999 499999999999999999998 78999999999999999
Q ss_pred HHcCCCCCcEEEEEeCCeEe------------eee---eC-CCCHHHHHHHHHHHhcCCc
Q 017071 121 KEYNILAYPTLYLFVAGVRQ------------FQF---FG-ERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~------------~~~---~g-~~~~~~l~~~i~~~~~~~~ 164 (378)
++|||+++||+++|++|... .+| .| .++++.|.+||.+.++..+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i 156 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISI 156 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCc
Confidence 99999999999999977422 345 35 8999999999999997665
No 67
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.86 E-value=9.8e-22 Score=154.24 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=89.8
Q ss_pred cChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEe
Q 017071 61 LNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQ 140 (378)
Q Consensus 61 l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 140 (378)
++++.++....++++++|+|||+||++|+++.|.++++++++++++.++.||++++++++++|+|.++||++++++|+.+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 44444555567899999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred eeeeCCCCHHHHHHHHHH
Q 017071 141 FQFFGERTRDVISAWVRE 158 (378)
Q Consensus 141 ~~~~g~~~~~~l~~~i~~ 158 (378)
.++.|..+.++|.++|++
T Consensus 110 ~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 110 ARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEESSCCCHHHHHHHHTT
T ss_pred EEecCCCCHHHHHHHHHh
Confidence 999999999999999864
No 68
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.86 E-value=8.3e-21 Score=147.56 Aligned_cols=104 Identities=22% Similarity=0.322 Sum_probs=95.9
Q ss_pred CCcEEcChhcHHHHhc----CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEE
Q 017071 56 KDVVSLNGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~----~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (378)
..+..++.++|+..+. ++++++|.||++||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4566789999998774 589999999999999999999999999999885 99999999999999999999999999
Q ss_pred EEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+++++|+.+.++.|.. .+.|.++|.+.+.
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999999999999999 9999999998874
No 69
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.86 E-value=3.4e-21 Score=172.78 Aligned_cols=106 Identities=23% Similarity=0.409 Sum_probs=100.5
Q ss_pred CCCcEEcChhcHHHHhcC--CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
...++++|.++|++.+.. +++|+|+|||+||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++||++
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 85 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVY 85 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEE
Confidence 357899999999998854 899999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|++|+.+.++.|..+.+.+.+|+...+
T Consensus 86 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 86 LFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 9999999999999999999999999887
No 70
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.86 E-value=8.1e-21 Score=143.40 Aligned_cols=97 Identities=25% Similarity=0.387 Sum_probs=90.5
Q ss_pred ChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeE
Q 017071 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (378)
Q Consensus 62 ~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 139 (378)
+.+++++.+. ++++++|.||++||++|+.+.|.++++++.+++ +.++.||++++++++++|+|.++||++++++|+.
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeE
Confidence 5678888886 789999999999999999999999999999975 9999999999999999999999999999999999
Q ss_pred eeeeeCCCCHHHHHHHHHHHh
Q 017071 140 QFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+.++.|. +.+.+.+++.+.+
T Consensus 86 ~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 86 VGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEeCC-CHHHHHHHHHHhC
Confidence 9999999 9999999998763
No 71
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.86 E-value=5e-21 Score=164.89 Aligned_cols=112 Identities=20% Similarity=0.361 Sum_probs=103.6
Q ss_pred cccCCCcEEcChhcHHHH-hcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 52 LLYAKDVVSLNGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 52 ~~~~~~v~~l~~~~~~~~-~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
......+..+|+++|+.. +.++++++|+|||+||++|+.+.|.|+++++++++++.++.||++++++++++|+|.++||
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 345578899999999975 5788999999999999999999999999999999889999999999999999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
++++++|+.+.++.|..+.+.+.++|.+.+...
T Consensus 88 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 88 LLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred EEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 999999999999999999999999999988543
No 72
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.86 E-value=2.4e-21 Score=153.48 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=96.2
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC---------cCcHHHHHHcCC
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA---------YLEKDLAKEYNI 125 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~---------~~~~~~~~~~~v 125 (378)
...+..++.++|++.+.+ +++|+|||+||++|+.+.|.+++++++++ +.|+.||+ +++++++++|+|
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 457889999999998865 99999999999999999999999999886 99999999 889999999999
Q ss_pred CCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCCc
Q 017071 126 LAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 126 ~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (378)
.++||++++++|+.+.++.|..+.+.+.+++++++..+-
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp CSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC----
T ss_pred ceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999886543
No 73
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.85 E-value=8e-21 Score=146.53 Aligned_cols=101 Identities=26% Similarity=0.448 Sum_probs=93.2
Q ss_pred CcEEcCh-hcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 57 DVVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 57 ~v~~l~~-~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
.+..+++ ++|+..+. ++++++|.|||+||++|+.+.|.++++++++ ++.++.||++++++++++|+|.++||+++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 4788888 89998886 7899999999999999999999999999888 79999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++|+.+.++.| .+.+.|.++|++++
T Consensus 92 ~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 92 IKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 999999999999 68899999998753
No 74
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.85 E-value=1.4e-21 Score=151.68 Aligned_cols=107 Identities=25% Similarity=0.505 Sum_probs=95.3
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-----CcEEEEEeCcCcHHHHHHcCCCC
Q 017071 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-----EADLVMVDAYLEKDLAKEYNILA 127 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-----~~~~~~vd~~~~~~~~~~~~v~~ 127 (378)
....+.++++++|++.+ .++++++|+|||+||++|+++.|.|+++++++++ ++.++.||+++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 55688999999999876 6789999999999999999999999999999986 7999999999876 665 9999
Q ss_pred CcEEEEEeCCeE--eeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 128 YPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 128 ~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
+||+++|++|.. ..++.|.++.+.|.+||.+.+..+
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 999999997644 788999999999999999887543
No 75
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.85 E-value=4.2e-21 Score=150.19 Aligned_cols=106 Identities=16% Similarity=0.211 Sum_probs=94.2
Q ss_pred EEcChhcHH-----HHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEe--CcCcHHHHHHcCCCCCcEE
Q 017071 59 VSLNGKNFS-----EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--AYLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 59 ~~l~~~~~~-----~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd--~~~~~~~~~~~~v~~~Pt~ 131 (378)
..++.++++ ....++++++|+|||+||++|+.+.|.++++++.+++++.++.|| ++++.+++++|+|.++||+
T Consensus 7 ~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~ 86 (126)
T 2l57_A 7 KQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTT 86 (126)
T ss_dssp SCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEE
T ss_pred CCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEE
Confidence 344444554 455678999999999999999999999999999997789999999 9999999999999999999
Q ss_pred EEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCCc
Q 017071 132 YLFV-AGVRQFQFFGERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 132 ~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (378)
++++ +|+.+.++.|..+.+.|.++|++.+....
T Consensus 87 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 87 VFLDKEGNKFYVHQGLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp EEECTTCCEEEEEESCCCHHHHHHHHHHHCCCCC
T ss_pred EEECCCCCEEEEecCCCCHHHHHHHHHHHhcccc
Confidence 9999 99999999999999999999999885543
No 76
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.85 E-value=2e-20 Score=145.90 Aligned_cols=104 Identities=20% Similarity=0.324 Sum_probs=95.1
Q ss_pred CCCcEEcChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-CcHHHHHHcCCCCCcEE
Q 017071 55 AKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTL 131 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~ 131 (378)
...+..+++++|++.+. ++++++|.|||+||++|+++.|.+++++++++ ++.++.||++ ++++++++|+|.++||+
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~v~~~Pt~ 95 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTF 95 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSSSSEE
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 35788999999998775 78999999999999999999999999999987 6999999998 68999999999999999
Q ss_pred EEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++++|+.+.++.|.. .+.+.++|++..
T Consensus 96 ~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 96 KILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999999999986 899999998764
No 77
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.85 E-value=1.4e-20 Score=152.29 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=96.0
Q ss_pred CCcEEcC-hhcHHHHhcC--CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 56 KDVVSLN-GKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 56 ~~v~~l~-~~~~~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
..+..++ .++|+..+.+ +++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++||++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 4677886 5899988866 8999999999999999999999999999985 7999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
+|++|+.+.++.|. +.+.|.++|.+.++.
T Consensus 91 ~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999988899995 788999999999854
No 78
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.85 E-value=1.1e-21 Score=152.69 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=91.5
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEecCCCh--------------hHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHH
Q 017071 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCY--------------WSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA 120 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~--------------~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~ 120 (378)
..++.+++++|++.+ .++++++|+|||+||+ +|+.+.|.++++++++++++.++.||++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 468899999998654 7789999999999999 9999999999999999878999999999999999
Q ss_pred HHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++|+|.++||+++|++|+.+.++.|..+.+++.++|++.+
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998754
No 79
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.85 E-value=1.6e-20 Score=146.37 Aligned_cols=105 Identities=25% Similarity=0.357 Sum_probs=95.0
Q ss_pred cCCCcEEc-ChhcHHHHhc----CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCC
Q 017071 54 YAKDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAY 128 (378)
Q Consensus 54 ~~~~v~~l-~~~~~~~~~~----~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~ 128 (378)
+...+..+ +.++|++.+. ++++++|+||++||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 44567788 6788988774 58999999999999999999999999999987 799999999999999999999999
Q ss_pred cEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 129 PTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 129 Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
||++++++|+.+.++.| .+.+.|.++|.+.+
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999999999999999 48999999998765
No 80
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.85 E-value=2.1e-20 Score=140.74 Aligned_cols=100 Identities=24% Similarity=0.437 Sum_probs=91.4
Q ss_pred EEcCh-hcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 59 VSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 59 ~~l~~-~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
..+++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||+++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 45665 88988886 78999999999999999999999999999987 7999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|+.+.++.| .+.+.+.++|++.+
T Consensus 81 ~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 81 DGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 9999999999 68999999998753
No 81
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.85 E-value=1.7e-21 Score=154.94 Aligned_cols=111 Identities=9% Similarity=0.131 Sum_probs=83.5
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCC--ChhHHhhHHHHHHHHHHhcCCcE--EEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGEAD--LVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~w--C~~C~~~~p~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
.+..++.++|++.+.+++.++|.||++| |++|+.+.|.|+++++++ +++. |++||++++++++++|+|+++||++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~ 96 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPATL 96 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeEE
Confidence 6778999999999887788999999988 999999999999999999 7788 9999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHhcCCcccCC
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSIT 168 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~ 168 (378)
+|++|+.+.++.|..+.+.|.++|.+.+..+...+.
T Consensus 97 ~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 97 VFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp EESCC----CEESCCCHHHHHHHHHHHHC-------
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 999999999999999999999999999977766654
No 82
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.85 E-value=5.5e-21 Score=145.73 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=92.7
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCC
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (378)
+..++.++| +.+.++++++|.|||+||++|+.+.|.++++++.+. ++.++.||++++++++++|+|.++||+++|++|
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 82 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRDG 82 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECC
Confidence 345788899 667788999999999999999999999999999876 799999999999999999999999999999999
Q ss_pred eEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 138 VRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+.+.++.|..+.+.|.+++.+..+
T Consensus 83 ~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 83 KVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp SEEEEEESCCCHHHHHHHHHTC--
T ss_pred EEEEEEcCCCCHHHHHHHHHHHhh
Confidence 999999999999999999987654
No 83
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.85 E-value=1.1e-20 Score=145.07 Aligned_cols=100 Identities=22% Similarity=0.390 Sum_probs=90.3
Q ss_pred CcEEcC-hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l~-~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+..++ .++++..+.++++++|.|||+||++|+.+.|.++++++++++ +.++.||++++++++++|+|.++||+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 91 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLGK 91 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEEe
Confidence 344444 466778888899999999999999999999999999999885 999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHH
Q 017071 136 AGVRQFQFFGERTRDVISAWVRE 158 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~ 158 (378)
+|+.+.++.|.. .+.|.++|++
T Consensus 92 ~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 92 DGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TTEEEEEEESSC-HHHHHHHHHT
T ss_pred CCeEEEEEeCCC-HHHHHHHHHh
Confidence 999999999998 9999999864
No 84
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.85 E-value=3.6e-21 Score=148.73 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=88.7
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC----cCcHHHHHHcCCCCCcEE
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~----~~~~~~~~~~~v~~~Pt~ 131 (378)
..+..++.++++..+.++++++|+|||+||++|+++.|.+++++++++..+.++.++. ++.++++++|+|.++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 4677889999999888899999999999999999999999999998865666653332 234688999999999999
Q ss_pred EEEeCCeEeeeeeCCCCHHHHHHHHH
Q 017071 132 YLFVAGVRQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (378)
+++++|+.+.++.|..+.+.|.+||.
T Consensus 92 ~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 92 VHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEECCEEEEEecCCCCHHHHHHHhh
Confidence 99999999999999999999999985
No 85
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=2.4e-21 Score=153.04 Aligned_cols=111 Identities=25% Similarity=0.498 Sum_probs=97.7
Q ss_pred cCCCcEEcChhcHHHHhc-CCCcEEEEEecCCChhHHhhHHHHHHHHHHhc--CCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 54 YAKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~-~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
....+..+++++|+..+. ++++++|+|||+||++|+.+.|.|++++++++ +++.++.||++++..++++|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 446889999999998774 58999999999999999999999999999997 379999999999999999999999999
Q ss_pred EEEEeCCeEe--eeee-CCCCHHHHHHHHHHHhcCCc
Q 017071 131 LYLFVAGVRQ--FQFF-GERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 131 ~~~~~~g~~~--~~~~-g~~~~~~l~~~i~~~~~~~~ 164 (378)
+++|++|+.+ .+|. |.++.+.|.+||.+.+....
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999977543 3577 56999999999999986553
No 86
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.84 E-value=2.4e-20 Score=144.70 Aligned_cols=104 Identities=23% Similarity=0.419 Sum_probs=95.1
Q ss_pred CCcEEcCh-hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC-cEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 56 KDVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 56 ~~v~~l~~-~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
..+..++. ++|++.+.++++++|.||++||++|+.+.|.++++++.+++. +.++.||++++++++++|+|.++||+++
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEE
Confidence 45556655 889999988999999999999999999999999999988764 9999999999999999999999999999
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++|+.+.++.|. +.+.|.++|.+.+
T Consensus 95 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 95 FKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9999999999999 9999999998765
No 87
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=142.93 Aligned_cols=99 Identities=13% Similarity=0.217 Sum_probs=86.0
Q ss_pred CCcEEcChhcHHHHhcC-CC--cEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 56 KDVVSLNGKNFSEFMGK-NR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~-~~--~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
..+.+++.++|.+.+.+ ++ +++|+|||+||++|+.+.|.++++++++. ++.|++||+++. +++|+|+++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 36788999999987743 33 89999999999999999999999999997 699999999986 5899999999999
Q ss_pred EEeCCeEeeeeeCCC-------CHHHHHHHHHH
Q 017071 133 LFVAGVRQFQFFGER-------TRDVISAWVRE 158 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~-------~~~~l~~~i~~ 158 (378)
+|++|+.+.++.|.. +.+.+..+|.+
T Consensus 79 ~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 79 VYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999999999865 56666666654
No 88
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-21 Score=155.66 Aligned_cols=104 Identities=21% Similarity=0.322 Sum_probs=94.0
Q ss_pred CCcEEcChhcHHHHhcCC--CcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcHHHHHHcCCC------
Q 017071 56 KDVVSLNGKNFSEFMGKN--RNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL------ 126 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~--~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~------ 126 (378)
..+..++.++|++.+.++ ++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||++++++++++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 468899999999888443 4999999999999999999999999999986 8999999999999999999999
Q ss_pred CCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
++||+++|++|+.+.++.|..+.+.|.+|+.+.
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 87 QLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999999999999999998888777776543
No 89
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.83 E-value=6.9e-20 Score=145.78 Aligned_cols=108 Identities=16% Similarity=0.302 Sum_probs=96.6
Q ss_pred cCCCcEEcC-hhcHHHHh----cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCC
Q 017071 54 YAKDVVSLN-GKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAY 128 (378)
Q Consensus 54 ~~~~v~~l~-~~~~~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~ 128 (378)
....++.++ .++|++.+ .++++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~ 100 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKAT 100 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEE
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCcc
Confidence 345666775 78998776 358999999999999999999999999999985 799999999999999999999999
Q ss_pred cEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 129 PTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 129 Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
||++++++|+.+.++.|. +.+.|.++|.+.+...
T Consensus 101 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 101 PTFFFLRDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred cEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 999999999999999999 8999999999888543
No 90
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.83 E-value=2.2e-20 Score=149.02 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=87.0
Q ss_pred ChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeE
Q 017071 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (378)
Q Consensus 62 ~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 139 (378)
+.++|++.+. ++++++|+|||+||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||+++|++|+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 5778886663 58999999999999999999999999999998789999999999999999999999999999999987
Q ss_pred ee---------eeeCCCC-HHHHHHHHHHHh
Q 017071 140 QF---------QFFGERT-RDVISAWVREKM 160 (378)
Q Consensus 140 ~~---------~~~g~~~-~~~l~~~i~~~~ 160 (378)
+. ++.|..+ .+++.++|++.+
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 75 3556554 888888888766
No 91
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.83 E-value=1e-19 Score=140.40 Aligned_cols=105 Identities=29% Similarity=0.409 Sum_probs=94.7
Q ss_pred CCcEEc-ChhcHHHHhcC----CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 56 KDVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 56 ~~v~~l-~~~~~~~~~~~----~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
..++.+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 456777 57889887744 8999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
++++++|+.+.++.| .+.+.+.++|.+.+..
T Consensus 85 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999998899999 5899999999988753
No 92
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.83 E-value=7.5e-20 Score=141.23 Aligned_cols=104 Identities=19% Similarity=0.287 Sum_probs=91.2
Q ss_pred CcEEc--ChhcHHH-HhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 57 DVVSL--NGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 57 ~v~~l--~~~~~~~-~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
.+.++ +.++|++ +..++++++|.|||+||++|+.+.|.++++++++ +++.|+.||++++++++++|+|.++||+++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 46667 5778885 4467899999999999999999999999999998 689999999999999999999999999999
Q ss_pred EeC----CeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 134 FVA----GVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 134 ~~~----g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
|++ |+.+.++.|..+ ++|.+.+.+...+
T Consensus 83 ~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 83 VKKEGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp EEEETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred EeCCCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 998 988999999865 4599999887654
No 93
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.82 E-value=6.8e-20 Score=140.20 Aligned_cols=103 Identities=26% Similarity=0.395 Sum_probs=93.6
Q ss_pred CCcEEc-ChhcHHHHhc----CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 56 ~~v~~l-~~~~~~~~~~----~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
..++.+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcccE
Confidence 456777 6788988774 48999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 131 LYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++++++|+.+.++.| .+.+.+.++|.+++
T Consensus 83 ~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999998899999 58899999998876
No 94
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.82 E-value=4e-20 Score=145.93 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=93.6
Q ss_pred cCCCcEEcCh-hcHHHHhcC--CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 54 YAKDVVSLNG-KNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 54 ~~~~v~~l~~-~~~~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
....++.+++ ++++..+.. +++++|+|||+||++|+.+.|.++++++.+ ++.++.||++++++++++|+|.++||
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt 95 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPT 95 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCE
Confidence 4456788875 888888854 579999999999999999999999998877 59999999999999999999999999
Q ss_pred EEEEe--CCe--EeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 131 LYLFV--AGV--RQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 131 ~~~~~--~g~--~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
+++|+ +|+ .+.++.|. +.++|.++|.+.+..
T Consensus 96 ~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred EEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 99996 887 78889998 899999999988753
No 95
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.81 E-value=1.5e-19 Score=157.69 Aligned_cols=109 Identities=36% Similarity=0.546 Sum_probs=100.3
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC---CcEEEEEeCcCcHHHHHHcCCCCCcEE
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (378)
...+..++.++|+..+.++++++|+|||+||++|+.+.|.|.++++.+.+ ++.++.||++++++++++|+|.++||+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEE
Confidence 34678899999999998889999999999999999999999999999876 399999999999999999999999999
Q ss_pred EEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCCc
Q 017071 132 YLFVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (378)
++|++|+.+. |.|.++.+.|.+||.+.+++.+
T Consensus 209 ~~~~~g~~~~-~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 209 KIFRKGRPYD-YNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEEETTEEEE-CCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEEECCeEEE-ecCCCCHHHHHHHHHhhhCCCC
Confidence 9999996655 9999999999999999987654
No 96
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=2.6e-19 Score=141.55 Aligned_cols=102 Identities=13% Similarity=0.175 Sum_probs=90.9
Q ss_pred CCCcEEcChhcHHHHhcC---CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEE
Q 017071 55 AKDVVSLNGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~---~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (378)
...+..++.++|++.+.+ +++++|+|||+||++|+.+.|.|+++++++. ++.|+.||+++.. ++|+|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCEE
Confidence 356888999999988743 3689999999999999999999999999986 6999999999875 79999999999
Q ss_pred EEEeCCeEeeeeeCCC-------CHHHHHHHHHHHh
Q 017071 132 YLFVAGVRQFQFFGER-------TRDVISAWVREKM 160 (378)
Q Consensus 132 ~~~~~g~~~~~~~g~~-------~~~~l~~~i~~~~ 160 (378)
++|++|+.+.++.|.. +.+.|.++|.+..
T Consensus 85 ~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 85 FVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 9999999999999976 7889999998764
No 97
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=1.9e-19 Score=141.49 Aligned_cols=106 Identities=19% Similarity=0.313 Sum_probs=92.9
Q ss_pred cEEcChhcHHHHh----cCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCc--CcHHHHHHcCCCCC
Q 017071 58 VVSLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAY 128 (378)
Q Consensus 58 v~~l~~~~~~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~ 128 (378)
.+.++..+|++.+ .++++++|+|||+||++|+.+.|.+ +++++.++.++.++.||++ .+..++++|+|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCC
Confidence 3456777787666 4689999999999999999999999 7777777668999999998 57899999999999
Q ss_pred cEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 129 PTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
||+++++ +|+.+.++.|..+.+.|.++|++.+.+.
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 9999995 9989999999999999999999988654
No 98
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.79 E-value=7.4e-19 Score=151.80 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=94.4
Q ss_pred cEEcChhcHHHHhcCCCcE-EEEEecCCChhHHhhHHHHHHHHHHhc----CCcEEEEEeCcCcHHHHHHcCCCCCcEEE
Q 017071 58 VVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~-lv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (378)
...+++++++.....++++ +|+|||+||++|+++.|.++++++.++ +++.++.||++++++++++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4567888888877666777 999999999999999999999999997 58999999999999999999999999999
Q ss_pred EEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++++|+...++.|..+.+.|.+||.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 9999998999999999999999998765
No 99
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.66 E-value=7.2e-21 Score=143.73 Aligned_cols=103 Identities=25% Similarity=0.477 Sum_probs=94.2
Q ss_pred CcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+.++++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++.+++++|+|.++||+++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 2yj7_A 2 SVIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFK 81 (106)
Confidence 35678889998554 67899999999999999999999999999999878999999999999999999999999999999
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 136 AGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+|+.+.++.|..+.+.+.+++.+.
T Consensus 82 ~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 82 NGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 998888999999999999998764
No 100
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.79 E-value=6e-19 Score=139.20 Aligned_cols=93 Identities=15% Similarity=0.276 Sum_probs=84.9
Q ss_pred HHhcCCCcEEEEEecCCChhHHhhHHHHH--HHHHHhcCCcEEEEEeC---cCcHHHHHHcCC---CCCcEEEEEe-CCe
Q 017071 68 EFMGKNRNVMVMFYANWCYWSKKLAPEFA--AAAKMLKGEADLVMVDA---YLEKDLAKEYNI---LAYPTLYLFV-AGV 138 (378)
Q Consensus 68 ~~~~~~~~~lv~F~a~wC~~C~~~~p~~~--~~~~~~~~~~~~~~vd~---~~~~~~~~~~~v---~~~Pt~~~~~-~g~ 138 (378)
....++++++|+|||+||++|+.+.|.|+ ++++.+++++.++.||+ +++++++++|+| .++||+++++ +|+
T Consensus 24 ~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 24 AGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGK 103 (133)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSC
T ss_pred HHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCC
Confidence 34457999999999999999999999999 99999877899999999 999999999999 9999999995 999
Q ss_pred EeeeeeC-------CCCHHHHHHHHHHHh
Q 017071 139 RQFQFFG-------ERTRDVISAWVREKM 160 (378)
Q Consensus 139 ~~~~~~g-------~~~~~~l~~~i~~~~ 160 (378)
.+.++.| ..+.+.+.+|+++..
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 104 VRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 9999999 789999999998754
No 101
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.78 E-value=2.6e-18 Score=148.54 Aligned_cols=120 Identities=20% Similarity=0.244 Sum_probs=101.5
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEe--cCCChhHHhhHHHHHHHHHHhc---CCcEEEEEeCcC-----cHHHHHHc
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFY--ANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYL-----EKDLAKEY 123 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~--a~wC~~C~~~~p~~~~~~~~~~---~~~~~~~vd~~~-----~~~~~~~~ 123 (378)
....++.|++.+|++.+.++++|||.|| ||||+ +.|.|+++++.+. +++.|+.|||++ ++++|++|
T Consensus 14 ~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp -CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 3457889999999998888899999999 99999 9999999999985 379999999999 89999999
Q ss_pred CCC--CCcEEEEEeCCeE--eeee--eCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhc
Q 017071 124 NIL--AYPTLYLFVAGVR--QFQF--FGERTRDVISAWVREKMTLGTYSITTTDEAERILT 178 (378)
Q Consensus 124 ~v~--~~Pt~~~~~~g~~--~~~~--~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~ 178 (378)
+|+ ++||+++|. |+. ..+| .|.++.+.|.+||.+.++.....-...+.++.++.
T Consensus 90 ~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g~i~~~d~l~~ 149 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCIKEFNEVLK 149 (248)
T ss_dssp TCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTTCCHHHHHHHT
T ss_pred CCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccccCCCCchHHHHHHHH
Confidence 999 999999999 863 6788 89999999999999998643323234455555543
No 102
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.77 E-value=1.1e-18 Score=137.82 Aligned_cols=98 Identities=23% Similarity=0.404 Sum_probs=85.9
Q ss_pred ChhcHHHHhc--CCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeC----cCcHHHHHHcCCCCCcEEE
Q 017071 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTLY 132 (378)
Q Consensus 62 ~~~~~~~~~~--~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~----~~~~~~~~~~~v~~~Pt~~ 132 (378)
+.++++..+. ++++++|+|||+||++|+.+.|.+ .++++.++ ++.++.||+ +.+.+++++|+|.++||++
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~ 96 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTIL 96 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEE
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEE
Confidence 4566776663 489999999999999999999999 99999887 599999999 5678999999999999999
Q ss_pred EEe-CCeEe--eeeeCCCCHHHHHHHHHHHh
Q 017071 133 LFV-AGVRQ--FQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 133 ~~~-~g~~~--~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++ +|+.+ .++.|..+.++|.+++.+.-
T Consensus 97 ~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 97 FFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred EECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 995 99777 68999999999999998654
No 103
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.77 E-value=1.8e-18 Score=166.39 Aligned_cols=117 Identities=23% Similarity=0.437 Sum_probs=103.9
Q ss_pred CCCcccCCCcEEcChhcHHHHhc-CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CcEEEEEeCcCcHHHHHHcCC
Q 017071 49 TWPLLYAKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLEKDLAKEYNI 125 (378)
Q Consensus 49 ~~~~~~~~~v~~l~~~~~~~~~~-~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v 125 (378)
+.|......+..+++++|+..+. ++++++|+|||+||++|+++.|.|+++++.+++ ++.++.||++.+ +++++|+|
T Consensus 345 ~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v 423 (481)
T 3f8u_A 345 PIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEV 423 (481)
T ss_dssp CCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCC
T ss_pred CCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCC
Confidence 44455567889999999998874 489999999999999999999999999999987 799999999998 89999999
Q ss_pred CCCcEEEEEeCCeE--eeeeeCCCCHHHHHHHHHHHhcCCccc
Q 017071 126 LAYPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLGTYS 166 (378)
Q Consensus 126 ~~~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~ 166 (378)
.++||+++|++|+. ..+|.|.++.+.+.+||.+....+...
T Consensus 424 ~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 466 (481)
T 3f8u_A 424 RGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVI 466 (481)
T ss_dssp CSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCCC
T ss_pred cccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCcccc
Confidence 99999999997755 789999999999999999998765543
No 104
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.76 E-value=1.5e-18 Score=143.20 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=84.3
Q ss_pred EcChhcHHHHh----cCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCcCcHHH-------------
Q 017071 60 SLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEKDL------------- 119 (378)
Q Consensus 60 ~l~~~~~~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~~~~~------------- 119 (378)
..+..+|++.+ .++++++|+|||+||++|+.+.+.+ .++.+.+++++.++.||++++.++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTER 109 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhh
Confidence 34555666554 6799999999999999999985554 566666655799999999887655
Q ss_pred -------------HHHcCCCCCcEEEEEe-CCeEeeeeeCCCC-HHHHHHHHHHHh
Q 017071 120 -------------AKEYNILAYPTLYLFV-AGVRQFQFFGERT-RDVISAWVREKM 160 (378)
Q Consensus 120 -------------~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~-~~~l~~~i~~~~ 160 (378)
+++|+|.++||+++++ +|+++.++.|..+ .+.+.++|++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 7999999999999996 9999999999998 999999998876
No 105
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.75 E-value=5.7e-18 Score=133.80 Aligned_cols=104 Identities=16% Similarity=0.288 Sum_probs=89.6
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC-------------------
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~------------------- 115 (378)
+..+.+++++.++....++++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 6 ~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (136)
T 1lu4_A 6 QFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNL 84 (136)
T ss_dssp CCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEE
T ss_pred CeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEE
Confidence 3445556666665444578999999999999999999999999999998 89999999987
Q ss_pred ---cHHHHHHcCCCCCcEEEEEe-CCeEeeeee---CCCCHHHHHHHHHHHh
Q 017071 116 ---EKDLAKEYNILAYPTLYLFV-AGVRQFQFF---GERTRDVISAWVREKM 160 (378)
Q Consensus 116 ---~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~---g~~~~~~l~~~i~~~~ 160 (378)
+..++++|++.++|++++++ +|++. ++. |..+.+.+.++|++.+
T Consensus 85 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 85 NDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp ECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred ECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 67899999999999999997 89888 999 9999999999998754
No 106
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.75 E-value=1.9e-18 Score=124.87 Aligned_cols=83 Identities=17% Similarity=0.353 Sum_probs=77.2
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHH
Q 017071 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (378)
Q Consensus 74 ~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (378)
.+++|.||++||++|+++.|.++++++++++++.++.+|++++++++++|||.++||+++ +|+. ++.|..+.+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 468999999999999999999999999998889999999999999999999999999998 8865 899999999999
Q ss_pred HHHHHHh
Q 017071 154 AWVREKM 160 (378)
Q Consensus 154 ~~i~~~~ 160 (378)
++|++.+
T Consensus 79 ~~l~~~l 85 (85)
T 1fo5_A 79 EAIKKRL 85 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998753
No 107
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.75 E-value=3.8e-18 Score=147.33 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=91.2
Q ss_pred cCCCcEEc-ChhcHHHHhc---CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCc
Q 017071 54 YAKDVVSL-NGKNFSEFMG---KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (378)
Q Consensus 54 ~~~~v~~l-~~~~~~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 129 (378)
....+..+ +.++|...+. ++++|+|+|||+||++|+.+.|.|.++++++. ++.|+.||+++ ..++++|+|.++|
T Consensus 110 ~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~-~~l~~~~~I~~~P 187 (245)
T 1a0r_P 110 RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN-TGAGDRFSSDVLP 187 (245)
T ss_dssp CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH-HCCTTSSCTTTCS
T ss_pred CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc-HHHHHHCCCCCCC
Confidence 34578888 7899998884 37899999999999999999999999999997 59999999987 7799999999999
Q ss_pred EEEEEeCCeEeeeeeCC-------CCHHHHHHHHHHHh
Q 017071 130 TLYLFVAGVRQFQFFGE-------RTRDVISAWVREKM 160 (378)
Q Consensus 130 t~~~~~~g~~~~~~~g~-------~~~~~l~~~i~~~~ 160 (378)
|+++|++|+.+.++.|. .+.+.|..||.+.-
T Consensus 188 Tll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 188 TLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 99999999888888875 34567888887653
No 108
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.75 E-value=1.5e-18 Score=148.01 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=91.9
Q ss_pred CCCcEEc-ChhcHHHHhcC---CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcE
Q 017071 55 AKDVVSL-NGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (378)
Q Consensus 55 ~~~v~~l-~~~~~~~~~~~---~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (378)
...+..+ +.++|...+.. +++++|+|||+||++|+.+.|.|.++++++. .+.|+.||++ ++.++++|+|.++||
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 4568888 89999988743 3899999999999999999999999999986 7999999999 888999999999999
Q ss_pred EEEEeCCeEeeeeeCCCCH-------HHHHHHHHHH
Q 017071 131 LYLFVAGVRQFQFFGERTR-------DVISAWVREK 159 (378)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~-------~~l~~~i~~~ 159 (378)
+++|++|+.+.++.|..+. +.|.+||.+.
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999999999999998764 8888888764
No 109
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.75 E-value=2.3e-17 Score=132.24 Aligned_cols=103 Identities=17% Similarity=0.257 Sum_probs=92.5
Q ss_pred EEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc------------------------
Q 017071 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------ 114 (378)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------------------------ 114 (378)
.+++++.++....++++++|.||++||++|+.+.|.+.++++++++++.++.|+++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPI 94 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCE
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcce
Confidence 57788888766668899999999999999999999999999999877999999964
Q ss_pred ---CcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 115 ---LEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 115 ---~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
.+..++++|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+.
T Consensus 95 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 95 FVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred EECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 456899999999999999996 99999999999999999999998874
No 110
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.75 E-value=1.1e-17 Score=131.98 Aligned_cols=105 Identities=17% Similarity=0.247 Sum_probs=90.4
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC-------------------
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~------------------- 115 (378)
+..+.+++++.++....++++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 7 ~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 7 QFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp CCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred CcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 3455666666666444578999999999999999999999999999998 89999999854
Q ss_pred ----cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 116 ----EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 116 ----~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+..++++|+|.++|++++++ +|+++ ++.|..+.+.+.++|.+.+.
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 56789999999999999997 89888 99999999999999988763
No 111
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.75 E-value=2.2e-18 Score=124.54 Aligned_cols=82 Identities=21% Similarity=0.390 Sum_probs=76.5
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHH
Q 017071 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (378)
Q Consensus 75 ~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (378)
+.+|.||++||++|+++.|.++++++++++++.++.+|++++++++++|||.++||+++ +|+. ++.|..+.+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999998889999999999999999999999999998 8865 8999999999999
Q ss_pred HHHHHh
Q 017071 155 WVREKM 160 (378)
Q Consensus 155 ~i~~~~ 160 (378)
+|.+.+
T Consensus 79 ~l~~~l 84 (85)
T 1nho_A 79 AINDEM 84 (85)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998765
No 112
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.74 E-value=1.3e-17 Score=143.66 Aligned_cols=101 Identities=23% Similarity=0.398 Sum_probs=92.8
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEec--CCChhHHhhHHHHHHHHHHhcC--CcEEEEEe-----CcCcHHHHHHcCCC
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYA--NWCYWSKKLAPEFAAAAKMLKG--EADLVMVD-----AYLEKDLAKEYNIL 126 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a--~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd-----~~~~~~~~~~~~v~ 126 (378)
..++.|++.+|+..+.++++|+|.||| |||+ +.|.|+++++.+.+ ++.|+.|| |++++++|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 468899999999988888999999999 9999 99999999999964 79999999 55589999999999
Q ss_pred --CCcEEEEEeCCe--EeeeeeCCCCHHHHHHHHHHHh
Q 017071 127 --AYPTLYLFVAGV--RQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 127 --~~Pt~~~~~~g~--~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++||+++|++|+ ...+|.|.++.+.|.+||.+..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999999996 4789999999999999999885
No 113
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.74 E-value=8.1e-18 Score=132.58 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=96.4
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCC--CcEEEEE
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILA--YPTLYLF 134 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~--~Pt~~~~ 134 (378)
-+.++|.++|++.+..+.+++|.|||+ |++|+.+.|.++++|+++++++.|+.||.+++++++++|||++ +||++++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 367899999998888889999999999 8999999999999999999999999999999999999999999 9999999
Q ss_pred eC--CeEeeeee--CCCCHHHHHHHHHHHhcCCc
Q 017071 135 VA--GVRQFQFF--GERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 135 ~~--g~~~~~~~--g~~~~~~l~~~i~~~~~~~~ 164 (378)
++ |+. .+.. |..+.+.|.+|+++.+...+
T Consensus 86 ~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 86 EVAKNQK-FPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp CTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred ecCcCcc-cCCCCccccCHHHHHHHHHHHHcCCc
Confidence 96 654 5665 99999999999999886554
No 114
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.74 E-value=2.9e-19 Score=140.31 Aligned_cols=107 Identities=26% Similarity=0.389 Sum_probs=94.7
Q ss_pred CCCcEEc-ChhcHHHHhc----CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCc
Q 017071 55 AKDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (378)
Q Consensus 55 ~~~v~~l-~~~~~~~~~~----~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 129 (378)
...+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++|
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 91 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAMP 91 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSSC
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCccc
Confidence 3466777 4588887774 48999999999999999999999999999987 7999999999999999999999999
Q ss_pred EEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
|++++++|+.+.++.| .+.+.+.++|.+.+...
T Consensus 92 t~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 92 TFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp CCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred eEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 9999999988888999 58889999999988543
No 115
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.74 E-value=6.3e-18 Score=131.35 Aligned_cols=101 Identities=14% Similarity=0.237 Sum_probs=87.7
Q ss_pred CcEEcChhcHHHHhcC--CCcEEEEEecC-------CChhHHhhHHHHHHHHHHhcCCcEEEEEeC-------cCcHHHH
Q 017071 57 DVVSLNGKNFSEFMGK--NRNVMVMFYAN-------WCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------YLEKDLA 120 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~--~~~~lv~F~a~-------wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~-------~~~~~~~ 120 (378)
.+...+.++|++.+.+ +++++|+|||+ ||++|+.+.|.++++++++++++.|+.||+ +.++.++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 4556788899988854 89999999999 999999999999999999987899999999 7889999
Q ss_pred HHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHH
Q 017071 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (378)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (378)
++|+|.++||+++|++|.....+.| .+.+.|.++|.+
T Consensus 86 ~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999999999999998756555555 467888888864
No 116
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.74 E-value=1.3e-17 Score=134.98 Aligned_cols=96 Identities=16% Similarity=0.367 Sum_probs=82.9
Q ss_pred cHHHHhcCCCcEEEEEe-cCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCcCc-----------HHHHHHcCCCCCc
Q 017071 65 NFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE-----------KDLAKEYNILAYP 129 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~~-----------~~~~~~~~v~~~P 129 (378)
.++....++++++|+|| |+||++|+.+.|.+ .++++.++.++.++.||+++. .+++++|+|.++|
T Consensus 39 ~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~P 118 (154)
T 2ju5_A 39 ALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFP 118 (154)
T ss_dssp HHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSS
T ss_pred HHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCC
Confidence 33334456899999999 99999999999999 778776655899999999875 4899999999999
Q ss_pred EEEEEe-CCeEeeeeeCCC--CHHHHHHHHHHHhc
Q 017071 130 TLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (378)
Q Consensus 130 t~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (378)
|+++++ +|+++.++ |.. +.+.+.++|.+.+.
T Consensus 119 t~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 119 ELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp EEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999996 99999999 988 99999999988764
No 117
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.74 E-value=1.1e-17 Score=124.33 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=84.6
Q ss_pred CcEEc-ChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHH----HHHHcCCCC-CcE
Q 017071 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILA-YPT 130 (378)
Q Consensus 57 ~v~~l-~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~-~Pt 130 (378)
....+ +.++|++++.++++++|.|+|+||++|+.+.|.|+++++. +++.++.||++++++ ++++|||++ .||
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 34445 5677999888899999999999999999999999999985 479999999999977 799999995 999
Q ss_pred EEEEeCCeEeee-eeCCCCHHHHHHHH
Q 017071 131 LYLFVAGVRQFQ-FFGERTRDVISAWV 156 (378)
Q Consensus 131 ~~~~~~g~~~~~-~~g~~~~~~l~~~i 156 (378)
+++|++|+.+.+ -.|..+.+.|.+.+
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999999988776 45788888887654
No 118
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.73 E-value=3e-18 Score=129.39 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=74.1
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhc--CCcEEEEEeCcCc--HHHHHHcCCCCCcEEEEEeCCeEeeeeeCCC
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE--KDLAKEYNILAYPTLYLFVAGVRQFQFFGER 147 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~ 147 (378)
+.+.+||+|||+||++|+.+.+.+....+... ..+.+..||++++ .+++.+|+|.++||+++|++|+++.++.|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 45789999999999999999876543322110 0377888998886 5799999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhc
Q 017071 148 TRDVISAWVREKMT 161 (378)
Q Consensus 148 ~~~~l~~~i~~~~~ 161 (378)
..+.+.+||.+.+.
T Consensus 97 ~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 97 GEDFFWPMLARLIG 110 (116)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988763
No 119
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.73 E-value=4.1e-17 Score=133.47 Aligned_cols=107 Identities=21% Similarity=0.325 Sum_probs=93.7
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcHHHHHHc----------
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEY---------- 123 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~---------- 123 (378)
+..+.+++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.+.+++|
T Consensus 16 ~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~ 95 (165)
T 3or5_A 16 SFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPV 95 (165)
T ss_dssp CCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCE
T ss_pred CceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCce
Confidence 34566677776664445789999999999999999999999999999987 5999999999887777766
Q ss_pred -----------------CCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 124 -----------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 124 -----------------~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++.++|++++++ +|+++.++.|..+.+.+.++|++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 96 MMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp EECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred EecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 899999999997 99999999999999999999999885
No 120
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.72 E-value=1.8e-17 Score=160.16 Aligned_cols=112 Identities=25% Similarity=0.451 Sum_probs=98.3
Q ss_pred CcccCCCcEEcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc-C--CcEEEEEeCcCcHHHHHHcCCC
Q 017071 51 PLLYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-G--EADLVMVDAYLEKDLAKEYNIL 126 (378)
Q Consensus 51 ~~~~~~~v~~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~-~--~~~~~~vd~~~~~~~~~~~~v~ 126 (378)
|......+..+++++|+..+ ..+++++|+||||||++|+.+.|.|+++++.++ + ++.++.+|++.+... + |+|.
T Consensus 353 p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~ 430 (504)
T 2b5e_A 353 FENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIE 430 (504)
T ss_dssp CCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCS
T ss_pred CccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCce
Confidence 33445789999999999876 568999999999999999999999999999987 3 799999999987644 4 9999
Q ss_pred CCcEEEEEeCCeE--eeeeeCCCCHHHHHHHHHHHhcCCc
Q 017071 127 AYPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 127 ~~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (378)
++||+++|++|+. ..+|.|.++.+.|.+||.+.+...+
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred ecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 9999999998866 7889999999999999999876544
No 121
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.72 E-value=1.2e-15 Score=131.57 Aligned_cols=197 Identities=13% Similarity=0.177 Sum_probs=153.9
Q ss_pred CcEEc-ChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l-~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.++.| +.+++++.+..+++++|-|+++| |....+.|.++|+.+. .+.|+.+. +.++|++|++++ |++++|+
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~~~F~~t~---~~~v~~~~~v~~-p~i~lfk 81 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFP-GVSFGIST---DSEVLTHYNITG-NTICLFR 81 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT-TSEEEEEC---CHHHHHHTTCCS-SEEEEEE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCC-CceEEEEC---CHHHHHHcCCCC-CeEEEEE
Confidence 34455 66899998888999999999999 5689999999999994 89998754 789999999998 9999999
Q ss_pred CC-eEeeeeeC----CCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEE-EEEEcCCCCc---cHHHHHHHh-cc
Q 017071 136 AG-VRQFQFFG----ERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLV-LGFLHDLEGM---ESEELAAAS-KL 205 (378)
Q Consensus 136 ~g-~~~~~~~g----~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~-v~f~~~~~~~---~~~~~~~~a-~~ 205 (378)
++ .....|.| .++.+.|.+||.....+.+.++ +.+++.++.....+.. +.|...++.. ..+.|..+| .+
T Consensus 82 ~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~-t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~ 160 (227)
T 4f9z_D 82 LVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEY-NPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLF 160 (227)
T ss_dssp TTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEEC-CHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHT
T ss_pred ecCcccccccccccCCCCHHHHHHHHHHhCCCceeec-CcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHh
Confidence 54 34556774 7999999999999998999998 5677777777664444 4455656543 346677878 77
Q ss_pred CCceeEEEEcc-----HHHHhhcCCCCCCCCCeEEEeecCCCCcccc-CCCCCHHHHHHHHHhc
Q 017071 206 HSDVNFYQTTS-----ADVAEFFHIHPKSKRPALIFLHLEAGKATPF-RHQFTRLAIANFVTHT 263 (378)
Q Consensus 206 ~~~~~f~~~~~-----~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y-~g~~~~~~l~~fi~~~ 263 (378)
++++.|..+.. ..+++.||++. ..+|+++++...+.....+ .|+++.+.|.+|++..
T Consensus 161 k~~i~F~~vd~~~~~~~~~l~~fgl~~-~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 161 QGKILFILVDSGMKENGKVISFFKLKE-SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp TTTCEEEEEETTSGGGHHHHHHTTCCG-GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred hCCEEEEEeCCccHhHHHHHHHcCCCc-ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 88899987643 35789999973 2489999998665443444 3789999999999863
No 122
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.72 E-value=1.5e-18 Score=162.10 Aligned_cols=96 Identities=28% Similarity=0.392 Sum_probs=83.0
Q ss_pred CCCcEEcChhcHHHHhcC--CCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--------CcEEEEEeCcCcHHHHHHcC
Q 017071 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--------EADLVMVDAYLEKDLAKEYN 124 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~--------~~~~~~vd~~~~~~~~~~~~ 124 (378)
...++.++.++|+..+.+ +++++|+|||+||++|+.+.|.|+++++++++ .+.|+.|||++++++|++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 467999999999988754 37999999999999999999999999999973 49999999999999999999
Q ss_pred CCCCcEEEEEeCC--eEeeeeeCCCCHH
Q 017071 125 ILAYPTLYLFVAG--VRQFQFFGERTRD 150 (378)
Q Consensus 125 v~~~Pt~~~~~~g--~~~~~~~g~~~~~ 150 (378)
|.++||+++|++| ....+|.|.++.+
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHH
Confidence 9999999999843 3466777764433
No 123
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.56 E-value=5.1e-19 Score=139.02 Aligned_cols=99 Identities=21% Similarity=0.348 Sum_probs=86.8
Q ss_pred hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCc--CcHHHHHHcCCCCCcEEEEEe--
Q 017071 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLFV-- 135 (378)
Q Consensus 63 ~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~-- 135 (378)
.+.++....++++++|+|||+||++|+.+.|.+ +++++.+++++.++.||++ ++.+++++|+|.++||+++|+
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 344555556789999999999999999999999 8999888878999999994 668899999999999999994
Q ss_pred CCeE--eeeeeCCCCHHHHHHHHHHHhc
Q 017071 136 AGVR--QFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 136 ~g~~--~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+|+. +.++.|..+.+.|.++|++.++
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 6877 7899999999999999988774
No 124
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.71 E-value=5.1e-17 Score=130.95 Aligned_cols=93 Identities=18% Similarity=0.193 Sum_probs=82.9
Q ss_pred cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC------------------------cHHHHHHcC-
Q 017071 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------------EKDLAKEYN- 124 (378)
Q Consensus 71 ~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~------------------------~~~~~~~~~- 124 (378)
.++++++|+|||+||++|+.+.|.+.++++++++ ++.++.|+++. ...++++|+
T Consensus 22 ~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 22 LKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 4789999999999999999999999999999965 79999999873 345788899
Q ss_pred -CCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 125 -ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 125 -v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
+.++|++++++ +|+++.++.|..+.+.+.++|++.....
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 99999999997 8999999999999999999999887543
No 125
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.71 E-value=5.9e-17 Score=130.54 Aligned_cols=106 Identities=23% Similarity=0.322 Sum_probs=88.8
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC---------------------
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------------------- 115 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~--------------------- 115 (378)
+.+++++.+...-.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 11 l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d 90 (151)
T 2f9s_A 11 LEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLD 90 (151)
T ss_dssp EECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEE
T ss_pred eEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEC
Confidence 33444444332223789999999999999999999999999999987 79999999876
Q ss_pred -cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 116 -EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 116 -~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
+..++++|+|.++|++++++ +|+++.++.|..+.+.+.++|++++...
T Consensus 91 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 91 TDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp TTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 34789999999999999996 9999999999999999999999987543
No 126
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.71 E-value=4.4e-17 Score=140.88 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=90.9
Q ss_pred CcEEcChhcHHHHhcCCCcE-EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~-lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+..+++++|+.....++++ +|.|||+||++|+.+.|.++++++.+ +++.++.||++++++++++|+|.++||+++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-- 195 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQDLAEQFQVVGVPKIVI-- 195 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHHHHHHTTCCSSSEEEE--
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHHcCCcccCEEEE--
Confidence 45678899999887666666 88999999999999999999999998 489999999999999999999999999998
Q ss_pred CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 136 AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+|+ +.++.|..+.+.|.+||.+.++
T Consensus 196 ~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 196 NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 886 6779999999999999998774
No 127
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.71 E-value=1.3e-16 Score=129.72 Aligned_cols=106 Identities=16% Similarity=0.239 Sum_probs=89.0
Q ss_pred CcEE-cChhcHHHHhcCCCcEEEEEecCCChhHHh-hHHHHHHHHHHhcC-CcEEEEEeCc-------------------
Q 017071 57 DVVS-LNGKNFSEFMGKNRNVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EADLVMVDAY------------------- 114 (378)
Q Consensus 57 ~v~~-l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~-~~p~~~~~~~~~~~-~~~~~~vd~~------------------- 114 (378)
.+.+ ++++.+...-.++++++|+|||+||++|+. ++|.+.++++++++ ++.++.|+++
T Consensus 13 ~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~ 92 (160)
T 3lor_A 13 DVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEF 92 (160)
T ss_dssp CEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHT
T ss_pred ccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHc
Confidence 3444 455555543347899999999999999999 49999999999987 6999999862
Q ss_pred ---------CcHH------HHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 115 ---------LEKD------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 115 ---------~~~~------~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
.... ++++|+|.++|++++++ +|+++.++.|..+.+.+.+.|++.+..
T Consensus 93 ~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 93 GIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp TCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred CCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 2334 89999999999999998 999999999999999999999988753
No 128
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.71 E-value=9.8e-17 Score=130.25 Aligned_cols=99 Identities=11% Similarity=0.137 Sum_probs=84.8
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhh-HHHHHHHHHHhcC-CcEEEEEeCc---------------------------
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDAY--------------------------- 114 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~-~p~~~~~~~~~~~-~~~~~~vd~~--------------------------- 114 (378)
+.+...-.++++++|+|||+||++|+.+ +|.+.++++++++ ++.++.|+++
T Consensus 19 ~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 19 TDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp SCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 4443333468999999999999999996 9999999999985 7999999863
Q ss_pred -CcH-----HHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 115 -LEK-----DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 115 -~~~-----~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
.+. .+++.|+|.++|++++++ +|+++.++.|..+.+.+.+.|++++..
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 122 589999999999999997 999999999999999999999998753
No 129
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.71 E-value=7.5e-18 Score=126.87 Aligned_cols=75 Identities=21% Similarity=0.313 Sum_probs=65.1
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc------CcHHHHHHcCCCCCcEEEEEeCCeEeeeeeC
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFG 145 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g 145 (378)
.+++++|+|||+||++|+.+.|.|+++++.++ .|||+ ++++++++|+|+++||+++ +|+ .|.|
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~G 79 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTG 79 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEES
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---EecC
Confidence 45778999999999999999999999987764 56666 6789999999999999777 885 3899
Q ss_pred CCCHHHHHHHHH
Q 017071 146 ERTRDVISAWVR 157 (378)
Q Consensus 146 ~~~~~~l~~~i~ 157 (378)
.++.+.|.+|+.
T Consensus 80 ~~~~~~l~~~~~ 91 (106)
T 3kp8_A 80 VRSLEALAVASG 91 (106)
T ss_dssp CCCHHHHHHHHT
T ss_pred CCCHHHHHHHhC
Confidence 999999999874
No 130
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.70 E-value=5.7e-17 Score=132.49 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=90.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeC----------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA---------------------- 113 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~---------------------- 113 (378)
.+.+++++.++....++++++|+|||+||++|+.+.|.+.+++++++. ++.++.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 667788888876666889999999999999999999999999998754 566666654
Q ss_pred ------cCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 114 ------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 114 ------~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+.+.+++++|+|.++||+++++ +|+++.++.|..+.+.+.++|++.+.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456799999999999999996 99999999999999999999988764
No 131
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.69 E-value=9.5e-18 Score=137.12 Aligned_cols=98 Identities=18% Similarity=0.305 Sum_probs=84.3
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHH-HHHHcCC--CCCcEEEEEe-CCeE
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD-LAKEYNI--LAYPTLYLFV-AGVR 139 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v--~~~Pt~~~~~-~g~~ 139 (378)
+.++....++++++|+|||+||++|+.+.|.|+++++.+..++.|+.||++.+.+ ++.+|++ .++||+++|+ +|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 5666677789999999999999999999999999877665567788889888877 8899998 6699999995 9988
Q ss_pred eeeeeCC----------CCHHHHHHHHHHHhc
Q 017071 140 QFQFFGE----------RTRDVISAWVREKMT 161 (378)
Q Consensus 140 ~~~~~g~----------~~~~~l~~~i~~~~~ 161 (378)
+.++.|. .+.+.+.++|++.+.
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 8888885 789999999988763
No 132
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.69 E-value=5.9e-17 Score=129.36 Aligned_cols=99 Identities=25% Similarity=0.450 Sum_probs=85.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc-CCcEEEEEeCcC--------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYL-------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~~vd~~~-------------------- 115 (378)
.+.+++++.+...- ++++++|.||++||++|+.+.|.+.+++++++ .++.++.|+++.
T Consensus 19 ~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 97 (145)
T 3erw_A 19 LMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFP 97 (145)
T ss_dssp EEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSC
T ss_pred eeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCcee
Confidence 44455555544222 78999999999999999999999999999998 489999999864
Q ss_pred -----cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHH
Q 017071 116 -----EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWV 156 (378)
Q Consensus 116 -----~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i 156 (378)
+..++++|+|.++|++++++ +|+++..+.|..+.+.+.++|
T Consensus 98 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 98 IVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp EEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred EEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 56899999999999999996 999999999999999999887
No 133
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.69 E-value=2.7e-16 Score=136.91 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=85.2
Q ss_pred EcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc----CCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 60 SLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
.++.+.++... ..++++++.||||||++|+.+.|.|++++..+. .++.++.||++++++++++|+|+++||+++
T Consensus 124 ~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i- 202 (243)
T 2hls_A 124 GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI- 202 (243)
T ss_dssp CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE-
T ss_pred CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE-
Confidence 34555555443 246778999999999999999999999999983 479999999999999999999999999988
Q ss_pred eCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 135 VAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
+|+. .|.|.++.++|.++|.+.++.
T Consensus 203 -~G~~--~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 203 -NGYL--VFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp -TTEE--EEESCCCHHHHHHHHHHHHTT
T ss_pred -CCEE--EEeCCCCHHHHHHHHHHHhhc
Confidence 8864 399999999999999998864
No 134
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.68 E-value=1e-16 Score=129.23 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=91.8
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcH------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK------------------ 117 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~------------------ 117 (378)
.+.+++++.+...-.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.
T Consensus 14 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 93 (152)
T 2lja_A 14 SYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLH 93 (152)
T ss_dssp EEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEE
T ss_pred EeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceee
Confidence 455555555543234689999999999999999999999999999987 6999999998765
Q ss_pred -----HHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 118 -----DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 118 -----~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
.++++|+|.++|++++++ +|+++.++.|..+.+.+.++|++.....
T Consensus 94 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 94 MGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp CSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred cCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 789999999999999998 9999999999999999999999887543
No 135
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.68 E-value=1.6e-16 Score=125.41 Aligned_cols=102 Identities=22% Similarity=0.302 Sum_probs=84.9
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC------------------------
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA------------------------ 113 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~------------------------ 113 (378)
+.+.+++.+...-.++++++|.||++||++|+.+.|.+.++++++++++.++.|++
T Consensus 7 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (138)
T 4evm_A 7 LMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNL 86 (138)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTC
T ss_pred eECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCe
Confidence 33444444432224789999999999999999999999999999877899999953
Q ss_pred ----cCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 114 ----YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 114 ----~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+.+..++++|++.++|++++++ +|+++.++.|..+.+.+.++|++.
T Consensus 87 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 87 PVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp CEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred eEEECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 3356799999999999999996 999999999999999999998763
No 136
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.68 E-value=1.8e-16 Score=128.05 Aligned_cols=106 Identities=14% Similarity=0.217 Sum_probs=89.6
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC----------------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA---------------------- 113 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~---------------------- 113 (378)
..+.+++++.+...-.+ ++++|.||++||++|+.+.|.+.++++++ ++.++.|++
T Consensus 14 f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 90 (154)
T 3ia1_A 14 FLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPL 90 (154)
T ss_dssp CCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEEC
T ss_pred eEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCccc
Confidence 34555555555433335 99999999999999999999999999999 788999998
Q ss_pred -----cCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCCc
Q 017071 114 -----YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 114 -----~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (378)
+....++++|+|.++|++++++ +|+++.++.|..+.++|.++|++....+-
T Consensus 91 ~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 91 LASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp BCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred ccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCccc
Confidence 4678899999999999999997 99999999999999999999999885543
No 137
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.68 E-value=1e-16 Score=128.42 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=88.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcHH-----------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD----------------- 118 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~----------------- 118 (378)
.+.+++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.+
T Consensus 15 ~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 3hcz_A 15 YMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNV 94 (148)
T ss_dssp CCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEE
T ss_pred EEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEE
Confidence 445556655554334789999999999999999999999999999987 59999999997766
Q ss_pred --------HHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 119 --------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 119 --------~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++.|+|.++|++++++ +|+++.++.|..+.+.+.+.+.+.+
T Consensus 95 ~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 95 RDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp ECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred eccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 99999999999999997 9999999999877777777776654
No 138
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.67 E-value=2.9e-16 Score=126.73 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=90.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeC----------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA---------------------- 113 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~---------------------- 113 (378)
.+.+++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+.
T Consensus 12 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T 2l5o_A 12 SLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVM 91 (153)
T ss_dssp EEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEE
T ss_pred EeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEE
Confidence 455556665543334789999999999999999999999999999987 588887764
Q ss_pred -cCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhcCC
Q 017071 114 -YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 114 -~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (378)
+.+..+++.|+|.++|++++++ +|+++..+.|..+.+.+.++|.+.+...
T Consensus 92 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 92 YDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp ECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred cCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 3466899999999999999996 9988899999999999999999987543
No 139
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.67 E-value=5e-16 Score=125.31 Aligned_cols=102 Identities=12% Similarity=0.023 Sum_probs=84.1
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcHH----------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD---------------- 118 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~---------------- 118 (378)
..+.+++++.+...-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++...+
T Consensus 18 f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d 97 (152)
T 2lrt_A 18 IQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRD 97 (152)
T ss_dssp CCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEEC
T ss_pred eEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEEC
Confidence 3455555555442223689999999999999999999999999999987 69999999987654
Q ss_pred -------HHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHH
Q 017071 119 -------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 119 -------~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (378)
++++|++.++|++++++ +|+++.++.|..+.+....-+.
T Consensus 98 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 98 ANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKKLL 144 (152)
T ss_dssp SSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHHHH
T ss_pred CCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHHHH
Confidence 88999999999999998 9999999999988777655443
No 140
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.66 E-value=3.7e-16 Score=124.49 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=79.7
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHH---HHHHhcC-CcEEEEEeCcCcHH-------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKD------------- 118 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~---~~~~~~~-~~~~~~vd~~~~~~------------- 118 (378)
..+.+++++.+...-.++++++|+|||+||++|+.++|.+.+ +++++++ ++.++.|+.+.+.+
T Consensus 14 f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~ 93 (142)
T 3eur_A 14 FTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEW 93 (142)
T ss_dssp CEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTS
T ss_pred cEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhccccc
Confidence 345555655544333467999999999999999999999999 9999876 79999999987643
Q ss_pred -----------HHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHH
Q 017071 119 -----------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 119 -----------~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (378)
+++.|+|.++|++++++ +|+++.+..| .+++.++|+
T Consensus 94 ~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (142)
T 3eur_A 94 TNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLA 141 (142)
T ss_dssp EEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHH
T ss_pred ccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCCC---HHHHHHHHh
Confidence 47789999999999998 8988777654 678888775
No 141
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.66 E-value=2.5e-16 Score=125.47 Aligned_cols=101 Identities=19% Similarity=0.289 Sum_probs=79.4
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHH---HHHHhcC-CcEEEEEeCcCcHHH-------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKDL------------- 119 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~---~~~~~~~-~~~~~~vd~~~~~~~------------- 119 (378)
.+.+++++.+...-.++++++|+|||+||++|+.++|.+.+ +++++++ ++.++.|+++.+.+.
T Consensus 11 ~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 90 (142)
T 3ewl_A 11 TYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWI 90 (142)
T ss_dssp EEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCE
T ss_pred EEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcc
Confidence 44445555544333478999999999999999999999998 8888876 699999999876543
Q ss_pred -----------HHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 120 -----------AKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 120 -----------~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++.|+|.++|++++++ +|+++. +..+.+++.++|++..
T Consensus 91 ~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 91 VGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp EEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred eeeCCccchhhHHHcCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 3489999999999997 886655 5678999999988654
No 142
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.66 E-value=8.2e-16 Score=123.88 Aligned_cols=92 Identities=18% Similarity=0.293 Sum_probs=81.6
Q ss_pred cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcH----------------------HHHHHcCCCC
Q 017071 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK----------------------DLAKEYNILA 127 (378)
Q Consensus 71 ~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~----------------------~~~~~~~v~~ 127 (378)
.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|+|.+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999987 5999999998665 6888999999
Q ss_pred CcEEEEEe-CCeEeeeeeCCC--CHHHHHHHHHHHhcC
Q 017071 128 YPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMTL 162 (378)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~~ 162 (378)
+|++++++ +|+++.++.|.. +.+.+.++|++.+..
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 99999997 999999999964 558999999988754
No 143
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.66 E-value=3.5e-16 Score=126.20 Aligned_cols=101 Identities=22% Similarity=0.281 Sum_probs=82.2
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC---------------------
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------------------- 115 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~--------------------- 115 (378)
+.+++++.+...-.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 14 l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d 93 (152)
T 2lrn_A 14 GIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLL 93 (152)
T ss_dssp EECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEE
T ss_pred eEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEec
Confidence 34444444432223789999999999999999999999999999987 59999999987
Q ss_pred ----cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 116 ----EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 116 ----~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+..++++|+|.++|++++++ +|+++.++. +.+.+.++|++++.
T Consensus 94 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 94 QKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred ccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 57899999999999999996 998887764 44678888877763
No 144
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.66 E-value=6.2e-16 Score=128.82 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=88.4
Q ss_pred CCcEEc--ChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-Cc------EEEEEeCcC-cHHHHHHc--
Q 017071 56 KDVVSL--NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EA------DLVMVDAYL-EKDLAKEY-- 123 (378)
Q Consensus 56 ~~v~~l--~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~------~~~~vd~~~-~~~~~~~~-- 123 (378)
..+.++ +++.+...-.++++++|.||++||++|+.+.|.+.++++++++ ++ .++.|+++. +++.+++|
T Consensus 40 f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~ 119 (183)
T 3lwa_A 40 IGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVT 119 (183)
T ss_dssp CEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHH
T ss_pred eeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHH
Confidence 345556 5665553334789999999999999999999999999999987 48 999999998 66666665
Q ss_pred -----------------------CCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 124 -----------------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 124 -----------------------~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++.++|++++++ +|+++.++.|..+.+.|.++|++++.
T Consensus 120 ~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 120 DNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 689999999997 99999999999999999999988763
No 145
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.66 E-value=4.1e-16 Score=110.27 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=66.5
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCC-CHHHHHH
Q 017071 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGER-TRDVISA 154 (378)
Q Consensus 76 ~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~-~~~~l~~ 154 (378)
..|.|||+||++|+.+.|.++++++++++++.++.|| +.+++++|||.++||+++ +|+.+.+ |.. +.++|.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~ 74 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKK 74 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHH
Confidence 3689999999999999999999999998889999998 789999999999999988 8976555 987 9999988
Q ss_pred HH
Q 017071 155 WV 156 (378)
Q Consensus 155 ~i 156 (378)
++
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 75
No 146
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.65 E-value=3.7e-16 Score=125.18 Aligned_cols=101 Identities=21% Similarity=0.345 Sum_probs=83.7
Q ss_pred CcEEcChhcHHHH--hcCCCcEEEEEecCCChhHHhhHHHHHHHHHHh-cC-CcEEEEEeCcC-----------------
Q 017071 57 DVVSLNGKNFSEF--MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KG-EADLVMVDAYL----------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~--~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~-~~-~~~~~~vd~~~----------------- 115 (378)
.+.+++++.+... ..++++++|.||++||++|+.+.|.+.++++++ ++ ++.++.|+++.
T Consensus 15 ~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 94 (148)
T 3fkf_A 15 SLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWD 94 (148)
T ss_dssp CEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSE
T ss_pred EeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCce
Confidence 4445555544433 337899999999999999999999999999999 66 59999999887
Q ss_pred --------cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 116 --------EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 116 --------~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+..++++|+|.++|++++++ +|+++.++. +.+.+.++|++.+
T Consensus 95 ~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 95 QVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp EECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred EEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 34899999999999999996 897777665 8889999998776
No 147
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.65 E-value=1.8e-16 Score=129.30 Aligned_cols=83 Identities=18% Similarity=0.274 Sum_probs=72.6
Q ss_pred EcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHH-H--HHHHHHhcCCcEEEEEeCcCcHHHHHHc--------CCCCC
Q 017071 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-F--AAAAKMLKGEADLVMVDAYLEKDLAKEY--------NILAY 128 (378)
Q Consensus 60 ~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~-~--~~~~~~~~~~~~~~~vd~~~~~~~~~~~--------~v~~~ 128 (378)
..+++.|+....+++++||+|||+||++|+.+.|. | .++++.+++++.+++||.++.+++++.| |+.++
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 34678888888889999999999999999999993 3 5677777768999999999999999998 99999
Q ss_pred cEEEEEe-CCeEeee
Q 017071 129 PTLYLFV-AGVRQFQ 142 (378)
Q Consensus 129 Pt~~~~~-~g~~~~~ 142 (378)
||+++++ +|+.+..
T Consensus 106 Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 106 PLNIIMTPGKKPFFA 120 (173)
T ss_dssp SEEEEECTTSCEEEE
T ss_pred cceeeECCCCCceee
Confidence 9999998 8977654
No 148
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.65 E-value=5.3e-16 Score=127.30 Aligned_cols=103 Identities=14% Similarity=0.235 Sum_probs=85.5
Q ss_pred CCCcEEc--ChhcHHHH-hcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEe-------------------
Q 017071 55 AKDVVSL--NGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD------------------- 112 (378)
Q Consensus 55 ~~~v~~l--~~~~~~~~-~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd------------------- 112 (378)
+..+.++ +++.+... +.++++++|+||++||++|+.+.|.+++++++ ++.++.|+
T Consensus 30 ~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~ 106 (168)
T 2b1k_A 30 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPY 106 (168)
T ss_dssp CCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCC
T ss_pred CeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCC
Confidence 3456666 66665533 35789999999999999999999999999876 57788877
Q ss_pred ----CcCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 113 ----AYLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 113 ----~~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++.+..++++|+|.++|++++++ +|+++.++.|..+.+.+.++|.+.+
T Consensus 107 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 107 ALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp SEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred ceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 34566789999999999888887 9999999999999999999988776
No 149
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.65 E-value=2.2e-16 Score=128.71 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=76.6
Q ss_pred EcChhcHHHHh-cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcC---CCCCcEEEEEe
Q 017071 60 SLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYN---ILAYPTLYLFV 135 (378)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~---v~~~Pt~~~~~ 135 (378)
.++++.+.... .++++++|+|||+||++|+.+.|.++++++.++ ++.+..||.+++++++++|+ +.++||+++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 45555555443 357899999999999999999999999999876 79999999999999999997 99999999999
Q ss_pred C-CeEeeeeeCCCCHHHHHHHHHH
Q 017071 136 A-GVRQFQFFGERTRDVISAWVRE 158 (378)
Q Consensus 136 ~-g~~~~~~~g~~~~~~l~~~i~~ 158 (378)
+ |+.+.++ |.... .+.+.+.+
T Consensus 119 ~~G~~~~~~-g~~p~-~~~~~i~~ 140 (167)
T 1z6n_A 119 EEFNLLGRF-VERPQ-AVLDGGPQ 140 (167)
T ss_dssp TTCCEEEEE-ESSCH-HHHHHCHH
T ss_pred CCCCEEEEE-cCCCH-HHHHhHHH
Confidence 5 5776666 55443 34444443
No 150
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.64 E-value=9.6e-16 Score=124.46 Aligned_cols=105 Identities=16% Similarity=0.319 Sum_probs=87.0
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------- 115 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~------------------- 115 (378)
..+.+++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 24 f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~ 103 (158)
T 3hdc_A 24 FKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDA 103 (158)
T ss_dssp CEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECT
T ss_pred ceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECc
Confidence 3555666666554334789999999999999999999999999999985 89999999987
Q ss_pred cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCC--CCHHHHHHHHHHHh
Q 017071 116 EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKM 160 (378)
Q Consensus 116 ~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~ 160 (378)
+..++++|+|.++|++++++ +|+++.++.|. .+..++.+.+.+..
T Consensus 104 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 104 TGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp TSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC
T ss_pred hHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhc
Confidence 67899999999999999997 99999999996 45566666665543
No 151
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.64 E-value=3.7e-16 Score=124.89 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=70.1
Q ss_pred cHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHH---HhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe-CCeEe
Q 017071 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAK---MLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV-AGVRQ 140 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~---~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~-~g~~~ 140 (378)
.++.+..++++++|+|||+||++|+.+.|.+.+..+ ..+.++..+.|| ++..+++.++++.++||+++++ +|+.+
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 345555679999999999999999999999986432 222245555554 3445678899999999999999 99999
Q ss_pred eeeeCC-------CCH---HHHHHHHHHHh
Q 017071 141 FQFFGE-------RTR---DVISAWVREKM 160 (378)
Q Consensus 141 ~~~~g~-------~~~---~~l~~~i~~~~ 160 (378)
.+..|. +.. +.+.+.+++.+
T Consensus 115 ~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 115 ADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 999998 444 44555555443
No 152
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.64 E-value=7.7e-16 Score=124.57 Aligned_cols=95 Identities=18% Similarity=0.283 Sum_probs=81.1
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-----------------------CcHHHH
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----------------------LEKDLA 120 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-----------------------~~~~~~ 120 (378)
+.++.....+++++|.||++||++|+.+.|.+.+++++ +++.++.|+++ .+..++
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS 110 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH
Confidence 55554444689999999999999999999999999876 46888888864 345788
Q ss_pred HHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 121 KEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 121 ~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+
T Consensus 111 ~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 111 IEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred HhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999999988886 9988999999999999999998776
No 153
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.64 E-value=9.6e-16 Score=123.74 Aligned_cols=104 Identities=20% Similarity=0.318 Sum_probs=86.6
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc-------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE------------------- 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~------------------- 116 (378)
.+.+++++.+...-.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 91 (154)
T 3kcm_A 12 TLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVL 91 (154)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEE
T ss_pred EEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEE
Confidence 444555555543334789999999999999999999999999999987 799999999875
Q ss_pred ----HHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCC--CHHHHHHHHHHHh
Q 017071 117 ----KDLAKEYNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKM 160 (378)
Q Consensus 117 ----~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~ 160 (378)
..+++.|+|.++|++++++ +|+++.++.|.. +.+.+.++|+++.
T Consensus 92 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 92 LDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp ECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred ecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 3488999999999999997 999999999975 6779999998765
No 154
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.63 E-value=1.1e-15 Score=125.08 Aligned_cols=101 Identities=13% Similarity=0.253 Sum_probs=85.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc------------------CcH-
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEK- 117 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------------------~~~- 117 (378)
.+.+++++.+...-.++++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++ ++.
T Consensus 21 ~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~ 99 (165)
T 3ha9_A 21 SLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPE 99 (165)
T ss_dssp CEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHH
T ss_pred EeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHH
Confidence 45555555554333478999999999999999999999999999998 8999999998 443
Q ss_pred ---------------------HHHHHcCCCCCcEEEEEe-CCeEeeeeeCCC-CHHHHHHHHHHHh
Q 017071 118 ---------------------DLAKEYNILAYPTLYLFV-AGVRQFQFFGER-TRDVISAWVREKM 160 (378)
Q Consensus 118 ---------------------~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~-~~~~l~~~i~~~~ 160 (378)
.+++.|+|.++|++++++ +|+++. .|.. +.+.|.+.|++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 100 MFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp HHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 789999999999999997 886666 8888 9999999998765
No 155
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.63 E-value=1.5e-15 Score=125.72 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=85.6
Q ss_pred CCcEEcCh--hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC--------------------
Q 017071 56 KDVVSLNG--KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------- 113 (378)
Q Consensus 56 ~~v~~l~~--~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~-------------------- 113 (378)
..+.++++ ..+.....++++++|+||++||++|+.+.|.+.+++++ ++.++.|++
T Consensus 39 f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~ 115 (176)
T 3kh7_A 39 FDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLL 115 (176)
T ss_dssp CEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSE
T ss_pred cEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCce
Confidence 35555665 44544445789999999999999999999999999886 588888885
Q ss_pred ---cCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 114 ---YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 114 ---~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+.+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|.+.+.
T Consensus 116 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 116 SISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp EEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred EEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456788999999999999997 99999999999999999999887763
No 156
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.62 E-value=2.2e-16 Score=125.93 Aligned_cols=104 Identities=25% Similarity=0.381 Sum_probs=79.3
Q ss_pred HHhcCCCceEEecccchhhhhccchH-HH-----------------------------HHHhhhcCcchhhhhhHhhcCC
Q 017071 260 VTHTKHPLVVTLTIHNAQFVFQDPRK-QL-----------------------------LHVYVEMNSEGVGRRVSQEFGV 309 (378)
Q Consensus 260 i~~~~~P~~~~l~~~~~~~~~~~~~~-~l-----------------------------~f~~~d~~~~~~~~~l~~~~gi 309 (378)
+.++++|+|+++|.+|+..++..+++ ++ .|+++|.+...+. ++++.||+
T Consensus 8 ~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~-~~l~~fGl 86 (147)
T 3bj5_A 8 MKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQ-RILEFFGL 86 (147)
T ss_dssp -------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGH-HHHHHTTC
T ss_pred hhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHH-HHHHHcCC
Confidence 56788999999999998888777655 11 5777776545644 46799999
Q ss_pred CCCCCcEEEEEcC--CCccccCC-CCCCHHHHHHHHHHHhcCce--eeeccCCchhhhcc
Q 017071 310 SGNAPRVIAYSAR--DAKKYVLN-GELTLSSIKSFGEEFLEDKL--LNQSDQISETILKL 364 (378)
Q Consensus 310 ~~~~~p~i~i~~~--~~~~y~~~-~~~~~~~i~~Fi~~~~~Gkl--~~kSe~~p~~~~~~ 364 (378)
+.+..|+++|.+. .+++|.++ ++++.++|++|++++++||| ++||||||++|...
T Consensus 87 ~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~~ 146 (147)
T 3bj5_A 87 KKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 146 (147)
T ss_dssp CGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC--
T ss_pred CcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCCcCCC
Confidence 8878999999985 57789986 79999999999999999999 99999999998653
No 157
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=3.1e-15 Score=120.29 Aligned_cols=101 Identities=17% Similarity=0.288 Sum_probs=83.8
Q ss_pred CcEEcChhcHHHH--hcCCCcEEEEEecCCChh--HHhhHHHHHHHHHHh-cC-CcEEEEEeCcCcH-------------
Q 017071 57 DVVSLNGKNFSEF--MGKNRNVMVMFYANWCYW--SKKLAPEFAAAAKML-KG-EADLVMVDAYLEK------------- 117 (378)
Q Consensus 57 ~v~~l~~~~~~~~--~~~~~~~lv~F~a~wC~~--C~~~~p~~~~~~~~~-~~-~~~~~~vd~~~~~------------- 117 (378)
.+.+++++.+... ..++++++|+||++||++ |+.++|.+.++++++ ++ ++.++.|+++.++
T Consensus 15 ~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~ 94 (150)
T 3fw2_A 15 SLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLD 94 (150)
T ss_dssp CEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCC
T ss_pred EeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4555555555433 347899999999999999 999999999999999 65 6999999998764
Q ss_pred ------------HHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 118 ------------DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 118 ------------~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
.+++.|+|.++|++++++ +|+++.++. +.+.+.+.|++.+
T Consensus 95 ~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 95 WEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp SEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred ceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 789999999999999997 998777764 7888888888765
No 158
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.61 E-value=4.4e-15 Score=123.93 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=87.2
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc-----HHHHHHcCCC---
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----KDLAKEYNIL--- 126 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-----~~~~~~~~v~--- 126 (378)
..+.+++++.++..-.++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+ ..+++++++.
T Consensus 43 f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 122 (186)
T 1jfu_A 43 LAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLG 122 (186)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTC
T ss_pred cEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCc
Confidence 3455556655543334789999999999999999999999999999984 899999998865 5667777774
Q ss_pred --------------------CCcEEEEEe-CCeEeeeeeCCCC--HHHHHHHHHHHhcCC
Q 017071 127 --------------------AYPTLYLFV-AGVRQFQFFGERT--RDVISAWVREKMTLG 163 (378)
Q Consensus 127 --------------------~~Pt~~~~~-~g~~~~~~~g~~~--~~~l~~~i~~~~~~~ 163 (378)
++|++++++ +|+++.++.|..+ .+++.++|++++..+
T Consensus 123 ~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 123 YFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp CEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred eEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 899999997 9999999999865 789999999887544
No 159
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.60 E-value=5.6e-15 Score=124.37 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=87.9
Q ss_pred CcE-EcChhcHHHHhcCCC-cEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCc-------------------
Q 017071 57 DVV-SLNGKNFSEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY------------------- 114 (378)
Q Consensus 57 ~v~-~l~~~~~~~~~~~~~-~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~------------------- 114 (378)
.+. +++++.++..-.+++ +++|+||++||++|+.+.|.+.++++++++ ++.++.|+++
T Consensus 28 ~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~ 107 (196)
T 2ywi_A 28 ALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEE 107 (196)
T ss_dssp EEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHH
T ss_pred eeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHH
Confidence 444 456655543333666 599999999999999999999999999987 6999999984
Q ss_pred ----------CcHHHHHHcCCCCCcEEEEEe-CCeEeee---------eeCCCCHHHHHHHHHHHhcCC
Q 017071 115 ----------LEKDLAKEYNILAYPTLYLFV-AGVRQFQ---------FFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 115 ----------~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~---------~~g~~~~~~l~~~i~~~~~~~ 163 (378)
.+..++++|+|.++|++++++ +|+++.+ +.|..+.++|.+.|++.+...
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 108 LGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp HTCCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred cCCCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 456789999999999999997 8988777 567889999999999887543
No 160
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.59 E-value=3.1e-15 Score=119.23 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=73.3
Q ss_pred EcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCcH---------------------
Q 017071 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK--------------------- 117 (378)
Q Consensus 60 ~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~--------------------- 117 (378)
+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++.+.
T Consensus 19 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~ 98 (143)
T 4fo5_A 19 LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEG 98 (143)
T ss_dssp -----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECT
T ss_pred cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecc
Confidence 344544432224689999999999999999999999999999986 7999999887532
Q ss_pred -----HHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHH
Q 017071 118 -----DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 118 -----~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (378)
.+++.|+|.++|++++++ +|+++.+.. ..+++.+.++
T Consensus 99 ~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (143)
T 4fo5_A 99 LGKESELYKKYDLRKGFKNFLINDEGVIIAANV---TPEKLTEILK 141 (143)
T ss_dssp TGGGSHHHHHTTGGGCCCEEEECTTSBEEEESC---CHHHHHHHHT
T ss_pred cccchHHHHHcCCCCCCcEEEECCCCEEEEccC---CHHHHHHHHH
Confidence 577899999999999998 998777654 4566766664
No 161
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.59 E-value=5.2e-15 Score=118.07 Aligned_cols=87 Identities=16% Similarity=0.215 Sum_probs=72.8
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CcEEEEEeCcCc------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE------------------ 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~------------------ 116 (378)
.+.+++++.++....++++++|+|||+||++|+.+.|.+.++++++++ ++.++.|+++.+
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 12 NVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 455666666654444789999999999999999999999999999983 899999998863
Q ss_pred ------HHHHHHcCCCCCcEEEEEe--CCeEeeee
Q 017071 117 ------KDLAKEYNILAYPTLYLFV--AGVRQFQF 143 (378)
Q Consensus 117 ------~~~~~~~~v~~~Pt~~~~~--~g~~~~~~ 143 (378)
..++++|+|.++|++++++ +|+++.++
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEEecc
Confidence 5789999999999999997 88766654
No 162
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.59 E-value=7.3e-15 Score=133.88 Aligned_cols=103 Identities=18% Similarity=0.230 Sum_probs=88.1
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC---------------------
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------------------- 115 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~--------------------- 115 (378)
+.+.+++.+...-.++++++|+||++||++|+.+.|.+.++++++++ ++.++.|++++
T Consensus 67 L~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~f 146 (352)
T 2hyx_A 67 LNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISY 146 (352)
T ss_dssp ESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCS
T ss_pred cCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCc
Confidence 33455555543334689999999999999999999999999999987 79999998753
Q ss_pred ------cHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 116 ------EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 116 ------~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+..++++|+|.++|++++++ +|+++.++.|..+.+.+.++|++++
T Consensus 147 pv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 147 PIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp CEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred cEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 35789999999999999997 9999999999999999999999876
No 163
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.59 E-value=6.2e-15 Score=123.25 Aligned_cols=107 Identities=19% Similarity=0.268 Sum_probs=85.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc----------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY---------------------- 114 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~---------------------- 114 (378)
.+.+++++.+...-.++++++|+||++||++|+.++|.+.++++++++++.++.|+++
T Consensus 17 ~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~ 96 (188)
T 2cvb_A 17 ELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGI 96 (188)
T ss_dssp EEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTC
T ss_pred eeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCC
Confidence 4444555544433346899999999999999999999999999999877999999983
Q ss_pred -------CcHHHHHHcCCCCCcEEEEEe-CCeEeee--------eeCCCCHHHHHHHHHHHhcCC
Q 017071 115 -------LEKDLAKEYNILAYPTLYLFV-AGVRQFQ--------FFGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 115 -------~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~--------~~g~~~~~~l~~~i~~~~~~~ 163 (378)
.+..+++.|++.++|++++++ +|+++.+ +.|..+.++|.+.|++++...
T Consensus 97 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 97 FFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp CSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred CceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 456789999999999999997 8977665 223447889999999887543
No 164
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.57 E-value=5.2e-15 Score=121.01 Aligned_cols=87 Identities=16% Similarity=0.218 Sum_probs=71.8
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CcEEEEEeCcCc------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE------------------ 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~------------------ 116 (378)
.+.++++ .+.....++++++|+|||+||++|++++|.+.++++++++ ++.++.|+++.+
T Consensus 33 ~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3s9f_A 33 KLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPF 111 (165)
T ss_dssp CEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCT
T ss_pred eeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCccccc
Confidence 3444555 4443334789999999999999999999999999999985 789999998876
Q ss_pred ------HHHHHHcCCCCCcEEEEEe-C-CeEeeeee
Q 017071 117 ------KDLAKEYNILAYPTLYLFV-A-GVRQFQFF 144 (378)
Q Consensus 117 ------~~~~~~~~v~~~Pt~~~~~-~-g~~~~~~~ 144 (378)
..++++|+|.++|++++++ + |+++.+..
T Consensus 112 ~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 112 ANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred CchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEeccc
Confidence 6899999999999999999 5 87766543
No 165
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.57 E-value=5.9e-15 Score=118.04 Aligned_cols=86 Identities=19% Similarity=0.242 Sum_probs=70.7
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc--CCcEEEEEeCcCc------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------ 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~~vd~~~~------------------ 116 (378)
.+.++++ .+.....++++++|+|||+||++|+.+.|.+.+++++++ .++.++.|+++.+
T Consensus 13 ~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (146)
T 1o8x_A 13 KLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPF 91 (146)
T ss_dssp EEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCG
T ss_pred EEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeecc
Confidence 3445555 444333478999999999999999999999999999998 3789999998863
Q ss_pred ------HHHHHHcCCCCCcEEEEEe--CCeEeeee
Q 017071 117 ------KDLAKEYNILAYPTLYLFV--AGVRQFQF 143 (378)
Q Consensus 117 ------~~~~~~~~v~~~Pt~~~~~--~g~~~~~~ 143 (378)
..++++|+|.++||+++++ +|+++.+.
T Consensus 92 ~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 92 AQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp GGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred chhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEec
Confidence 4789999999999999998 88766654
No 166
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.56 E-value=8.9e-15 Score=108.87 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=70.5
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHH
Q 017071 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (378)
Q Consensus 74 ~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (378)
.+.++.||++||++|+.+.|.++++++++ ++.+..||++++++++++||++ +|+++++.+|+.+ ..|..+.+.|.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~--~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~ 103 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS--WFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIG 103 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS--CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc--CCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHH
Confidence 35799999999999999999999999887 4899999999999999999997 9999999999765 45888999999
Q ss_pred HHH
Q 017071 154 AWV 156 (378)
Q Consensus 154 ~~i 156 (378)
+||
T Consensus 104 ~~L 106 (107)
T 2fgx_A 104 AYL 106 (107)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 167
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.56 E-value=1.2e-14 Score=115.82 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=64.3
Q ss_pred cCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc--CCcEEEEEeCcCc------------------------HHHHHHcC
Q 017071 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------------KDLAKEYN 124 (378)
Q Consensus 71 ~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~~vd~~~~------------------------~~~~~~~~ 124 (378)
.++++++|+|||+||++|+.+.|.+.+++++++ .++.++.|+++.+ ..++++|+
T Consensus 26 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 26 LVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp GTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred hCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 368999999999999999999999999999998 3789999988863 46899999
Q ss_pred CCCCcEEEEEe--CCeEeeee
Q 017071 125 ILAYPTLYLFV--AGVRQFQF 143 (378)
Q Consensus 125 v~~~Pt~~~~~--~g~~~~~~ 143 (378)
|.++||+++++ +|+++.+.
T Consensus 106 v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 106 VESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCCEEESC
T ss_pred CCCCCEEEEEECCCCeEEecc
Confidence 99999999999 88766554
No 168
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.55 E-value=7.5e-15 Score=105.61 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=65.1
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHH
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (378)
++.|||+||++|+.+.|.+++++.++ +..||++++++++++||++ +||+++ .+|+.+. |..+.+.|.++|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l 72 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWL 72 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHH
Confidence 78899999999999999999876543 6889999999999999998 999998 8887653 889999999999
Q ss_pred HHHh
Q 017071 157 REKM 160 (378)
Q Consensus 157 ~~~~ 160 (378)
.+.+
T Consensus 73 ~~~~ 76 (87)
T 1ttz_A 73 DAAP 76 (87)
T ss_dssp HTCC
T ss_pred HHHH
Confidence 7654
No 169
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.54 E-value=1.7e-14 Score=117.61 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=85.0
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEecCCChh-HHhhHHHHHHHHHHhcC-----CcEEEEEeCcCc---------------
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG-----EADLVMVDAYLE--------------- 116 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~-C~~~~p~~~~~~~~~~~-----~~~~~~vd~~~~--------------- 116 (378)
+.+.+++.+...-.++++++|+||++||++ |+.++|.+.++++++++ ++.++.|++|.+
T Consensus 8 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~ 87 (164)
T 2ggt_A 8 LTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFS 87 (164)
T ss_dssp EEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTC
T ss_pred EEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcC
Confidence 344444444322236899999999999998 99999999999999864 789999988752
Q ss_pred -------------HHHHHHcCCCCCc---------------EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 117 -------------KDLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 117 -------------~~~~~~~~v~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
..++++|||.+.| ++++++ +|+++..+.|..+.+++.+.|.+.+.
T Consensus 88 ~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 88 PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2478899999999 888887 99999999999999999999988763
No 170
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.54 E-value=2e-14 Score=118.16 Aligned_cols=105 Identities=16% Similarity=0.211 Sum_probs=85.6
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChh-HHhhHHHHHHHHHHhc-----CCcEEEEEeCcCc--------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK-----GEADLVMVDAYLE-------------- 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~-C~~~~p~~~~~~~~~~-----~~~~~~~vd~~~~-------------- 116 (378)
.+.+.+++.+...-.++++++|+||++||++ |+.++|.+.+++++++ .++.++.|+++.+
T Consensus 10 ~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~ 89 (171)
T 2rli_A 10 HLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDF 89 (171)
T ss_dssp EEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTT
T ss_pred EEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHc
Confidence 3444444444322236899999999999998 9999999999999985 3799999988731
Q ss_pred --------------HHHHHHcCCCCCc---------------EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 117 --------------KDLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 117 --------------~~~~~~~~v~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
..+++.|+|.+.| ++++++ +|+++..+.|..+.+.+.+.|.+++.
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 90 HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 2588899999888 888887 99999999999999999999988774
No 171
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.54 E-value=4e-14 Score=121.19 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=86.1
Q ss_pred CCCcEEcChhcHHHHhcCCCc-EEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCc------------------
Q 017071 55 AKDVVSLNGKNFSEFMGKNRN-VMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY------------------ 114 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~-~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~------------------ 114 (378)
+..+.+++++.+...-..+++ ++|+||++||++|+.+.|.++++++++++ ++.++.|+++
T Consensus 40 ~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~ 119 (218)
T 3u5r_E 40 DFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVK 119 (218)
T ss_dssp CCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHH
T ss_pred CcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHH
Confidence 345666666665543346774 99999999999999999999999999987 5999999983
Q ss_pred -----------CcHHHHHHcCCCCCcEEEEEe-CCeEeeee---------eCCCCHHHHHHHHHHHhcCC
Q 017071 115 -----------LEKDLAKEYNILAYPTLYLFV-AGVRQFQF---------FGERTRDVISAWVREKMTLG 163 (378)
Q Consensus 115 -----------~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~---------~g~~~~~~l~~~i~~~~~~~ 163 (378)
.+..+++.|+|.++|++++++ +|+++.+. .|..+.+.|.+.|++.+...
T Consensus 120 ~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 120 AYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp HHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred HhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 456899999999999999997 88766432 12356788999998887543
No 172
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.53 E-value=4.1e-14 Score=118.48 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHH-H
Q 017071 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA-K 121 (378)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~-~ 121 (378)
+..+.+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|++++ . .+.+ +
T Consensus 30 ~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 109 (190)
T 2vup_A 30 DFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCT 109 (190)
T ss_dssp GSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred CeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHH
Confidence 33455566665543334789999999999999999999999999999987 69999999872 1 1223 2
Q ss_pred H-----------------------------cCCCCCc------EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 122 E-----------------------------YNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 122 ~-----------------------------~~v~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+ |++.++| ++++++ +|+++.++.|..+.+.+.+.|.+.+.
T Consensus 110 ~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 110 KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp HHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred hcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 2 4788899 888887 99999999999999999999988874
No 173
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.53 E-value=8e-13 Score=121.50 Aligned_cols=198 Identities=11% Similarity=0.108 Sum_probs=150.1
Q ss_pred CCcEEcC-hhcHHHHhc-CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 56 KDVVSLN-GKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 56 ~~v~~l~-~~~~~~~~~-~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
..+..++ .++++..+. .+++++|.|+++||.. ..+.|.++|..+.+.+.|+.++ +++++++|++. +|++++
T Consensus 123 ~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~~~f~~~~---~~~~~~~~~v~-~p~i~~ 195 (350)
T 1sji_A 123 DPVEIINSKLEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEAAEHFQPYIKFFATF---DKGVAKKLSLK-MNEVDF 195 (350)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHHHHHTTTTSEEEEEC---CHHHHHHHTCC-TTCEEE
T ss_pred CcceeccchHHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHHHHhhccCcEEEEEC---CHHHHHHcCCC-CCcEEE
Confidence 3566774 678888887 7788999999999754 4689999999998899999885 56899999999 999999
Q ss_pred EeC-CeEeeeeeCC-CCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccC--CeEEEEEEcCCCC---ccHHHHHHHh-cc
Q 017071 134 FVA-GVRQFQFFGE-RTRDVISAWVREKMTLGTYSITTTDEAERILTVE--SKLVLGFLHDLEG---MESEELAAAS-KL 205 (378)
Q Consensus 134 ~~~-g~~~~~~~g~-~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~--~~~~v~f~~~~~~---~~~~~~~~~a-~~ 205 (378)
|++ ++....|.|. ++.+.|.+||.+...+.+.+++. +.+.++.... +..++.|..+++. ...+.+..+| ++
T Consensus 196 ~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~-~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~ 274 (350)
T 1sji_A 196 YEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRP-EDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDN 274 (350)
T ss_dssp ECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCT-TTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHG
T ss_pred EeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcCh-hhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHh
Confidence 984 4456789997 99999999999999899999865 5556666542 4455667666553 2455677777 55
Q ss_pred CC--ceeEEEEcc---HHHH----hhcCCCCCCCCCeEEEeecCCC-Cccc-cC---CCCCHHHHHHHHHhc
Q 017071 206 HS--DVNFYQTTS---ADVA----EFFHIHPKSKRPALIFLHLEAG-KATP-FR---HQFTRLAIANFVTHT 263 (378)
Q Consensus 206 ~~--~~~f~~~~~---~~~~----~~~~i~~~~~~P~i~~~~~~~~-~~~~-y~---g~~~~~~l~~fi~~~ 263 (378)
++ ++.|+.+.. +.++ +.||++. ++|++++++..+. ++.. +. |.++.+.|.+|+++.
T Consensus 275 ~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~--~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 275 TDNPDLSIVWIDPDDFPLLVAYWEKTFKIDL--FKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp GGCSSCCEEEECGGGCHHHHHHHHHHCCSCT--TSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred CCCCceEEEEECchhhHHHHHHHHhhcCCCc--cCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 54 788887643 3355 7799973 4799999987443 3322 33 578999999999874
No 174
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.53 E-value=5.3e-14 Score=114.47 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=75.6
Q ss_pred CcEEcChhcHHHHhcCCCc-EEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCc-------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRN-VMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY------------------- 114 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~-~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~------------------- 114 (378)
.+.+++++.+...-.++++ ++|.|| |+||++|+.++|.+.++++++++ ++.++.|++|
T Consensus 12 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 91 (161)
T 3drn_A 12 EGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILV 91 (161)
T ss_dssp EEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEE
T ss_pred EeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEE
Confidence 4555566555433336777 999999 99999999999999999999987 6999999987
Q ss_pred --CcHHHHHHcCCCC----CcEEEEEe-CCeEeeeeeCC
Q 017071 115 --LEKDLAKEYNILA----YPTLYLFV-AGVRQFQFFGE 146 (378)
Q Consensus 115 --~~~~~~~~~~v~~----~Pt~~~~~-~g~~~~~~~g~ 146 (378)
.+..++++|++.+ +|++++++ +|+++..+.|.
T Consensus 92 ~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 92 SDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp ECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECS
T ss_pred ECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecC
Confidence 4567899999999 99999998 99999999994
No 175
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.6e-14 Score=118.80 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=81.3
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHH----
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA---- 120 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~---- 120 (378)
.+.+++++.+...-.++++++|+|||+||++|+ ++|.+.++++++++ ++.++.|+++. . .+.+
T Consensus 16 ~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~ 94 (171)
T 3cmi_A 16 APVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNY 94 (171)
T ss_dssp CCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhcc
Confidence 444555555543334789999999999999999 99999999999987 69999998741 1 1122
Q ss_pred --------------------------HHcCCCCCc------EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 121 --------------------------KEYNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 121 --------------------------~~~~v~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+.|++.++| ++++++ +|+++.++.|..+.+.+.+.|.+++.
T Consensus 95 ~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 95 GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 247899999 888887 99999999999999999999988764
No 176
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.52 E-value=5.9e-14 Score=117.20 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=85.3
Q ss_pred ccCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c-HHHH---
Q 017071 53 LYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E-KDLA--- 120 (378)
Q Consensus 53 ~~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~-~~~~--- 120 (378)
.++..+.+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. . ..+.
T Consensus 26 ~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~ 105 (187)
T 3dwv_A 26 IFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFV 105 (187)
T ss_dssp GGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSC
T ss_pred cCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHH
Confidence 3444566677776654445789999999999999999999999999999987 69999998762 1 1111
Q ss_pred ---------------------------------HHcCCCCCc---EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 121 ---------------------------------KEYNILAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 121 ---------------------------------~~~~v~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
..+++.++| ++++++ +|+++.++.|..+.+.|.+.|++++.
T Consensus 106 ~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 106 CTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred HhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 112345667 999997 99999999999999999999998874
No 177
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.52 E-value=4.5e-14 Score=115.71 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=81.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHH-HHHc
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDL-AKEY 123 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~-~~~~ 123 (378)
.+.+++++.+...-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++. . .+. .+++
T Consensus 15 ~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 94 (169)
T 2v1m_A 15 TVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKY 94 (169)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred eeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhc
Confidence 444555555443334789999999999999999999999999999987 69999999863 1 122 1222
Q ss_pred -----------------------------C-----CCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 124 -----------------------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 124 -----------------------------~-----v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
| |..+|++++++ +|+++.++.|..+.+.+.+.|++++.
T Consensus 95 ~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 95 GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred CCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3 34468999998 99999999999899999999988763
No 178
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.51 E-value=3.8e-14 Score=116.30 Aligned_cols=105 Identities=10% Similarity=0.119 Sum_probs=83.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHHH-Hc
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAK-EY 123 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~-~~ 123 (378)
.+.+++++.+...-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.++ ++
T Consensus 16 ~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~ 95 (170)
T 2p5q_A 16 TVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRF 95 (170)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHT
T ss_pred EEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhc
Confidence 445555555543334789999999999999999999999999999987 69999999862 1 22333 33
Q ss_pred -----------------------------CC--CCCc---EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 124 -----------------------------NI--LAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 124 -----------------------------~v--~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
++ .++| ++++++ +|+++.++.|..+.+.+.+.|++++.
T Consensus 96 ~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 96 KSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 44 6788 888987 99999999999999999999988764
No 179
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.50 E-value=6.2e-14 Score=118.92 Aligned_cols=103 Identities=10% Similarity=-0.012 Sum_probs=78.9
Q ss_pred cEEcC-hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC--------cHH---HHH---
Q 017071 58 VVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------EKD---LAK--- 121 (378)
Q Consensus 58 v~~l~-~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~--------~~~---~~~--- 121 (378)
+.+++ ++.+...-.++++++|+|||+||++|++++|.++++++++++ ++.++.|++++ ... .++
T Consensus 31 l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~ 110 (208)
T 2f8a_A 31 ARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVR 110 (208)
T ss_dssp ECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTS
T ss_pred eeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcc
Confidence 33444 444432224789999999999999999999999999999987 69999999861 122 222
Q ss_pred ---HcC-----------------------------------------------------CCCCcEEEEEe-CCeEeeeee
Q 017071 122 ---EYN-----------------------------------------------------ILAYPTLYLFV-AGVRQFQFF 144 (378)
Q Consensus 122 ---~~~-----------------------------------------------------v~~~Pt~~~~~-~g~~~~~~~ 144 (378)
+++ |...|++++++ +|+++.++.
T Consensus 111 ~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~ 190 (208)
T 2f8a_A 111 PGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 190 (208)
T ss_dssp SCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEEC
T ss_pred cccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeC
Confidence 333 33348999998 999999999
Q ss_pred CCCCHHHHHHHHHHHh
Q 017071 145 GERTRDVISAWVREKM 160 (378)
Q Consensus 145 g~~~~~~l~~~i~~~~ 160 (378)
|..+.++|.+.|++++
T Consensus 191 g~~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 191 RRFQTIDIEPDIEALL 206 (208)
T ss_dssp TTSCGGGGHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHh
Confidence 9999999998888765
No 180
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.24 E-value=1.9e-15 Score=122.73 Aligned_cols=103 Identities=16% Similarity=0.108 Sum_probs=78.8
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHH-HHHHhc-C-CcEEEEEeCcCcHHHHHHc----------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA-AAKMLK-G-EADLVMVDAYLEKDLAKEY---------- 123 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~-~~~~~~-~-~~~~~~vd~~~~~~~~~~~---------- 123 (378)
.+.+++++.++..-.++++++|.||++||++|+.+.|.+.+ +.++++ + ++.++.|+++++.+.+++|
T Consensus 17 ~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 96 (159)
T 2ls5_A 17 TITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPL 96 (159)
Confidence 45556666665443478999999999999999999999998 888877 3 7999999988765444433
Q ss_pred ------------C--CCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 124 ------------N--ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 124 ------------~--v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+ +.++|++++++ +|+++.++.| .+.+++.+++++..
T Consensus 97 ~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 97 GLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 3 67799999996 9988888877 46667777766543
No 181
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.49 E-value=2.2e-12 Score=119.26 Aligned_cols=198 Identities=10% Similarity=0.129 Sum_probs=149.4
Q ss_pred CCcEEcC-hhcHHHHhc-CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEE
Q 017071 56 KDVVSLN-GKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (378)
Q Consensus 56 ~~v~~l~-~~~~~~~~~-~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (378)
..+..++ .+++++.+. ..++++|.|+++||. ...+.|.++|..+.+.+.|+.++ +.+++++|+|.+ |++++
T Consensus 125 ~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~l 197 (367)
T 3us3_A 125 DPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLKL-NEIDF 197 (367)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEE
T ss_pred CCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEE
Confidence 3566774 578888887 678999999999966 56788999999998889999886 568999999996 99999
Q ss_pred EeCC-eEeeeeeCC-CCHHHHHHHHHHHhcCCcccCCCHHHHHHhhcc--CCeEEEEEEcCCCC---ccHHHHHHHh-cc
Q 017071 134 FVAG-VRQFQFFGE-RTRDVISAWVREKMTLGTYSITTTDEAERILTV--ESKLVLGFLHDLEG---MESEELAAAS-KL 205 (378)
Q Consensus 134 ~~~g-~~~~~~~g~-~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~--~~~~~v~f~~~~~~---~~~~~~~~~a-~~ 205 (378)
|+.+ .....|.|. ++.+.|.+||.....+.+.+++. +.+.+...+ .+..++.|+..++. ...+.+..+| .+
T Consensus 198 f~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~ 276 (367)
T 3us3_A 198 YEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKP-ESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDN 276 (367)
T ss_dssp ECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCG-GGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecCh-hhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHc
Confidence 9953 456788994 99999999999999999999965 444444443 34566667776543 2445677777 56
Q ss_pred CC--ceeEEEEccHHH-------HhhcCCCCCCCCCeEEEeecCCC--CccccCC---CCCHHHHHHHHHhc
Q 017071 206 HS--DVNFYQTTSADV-------AEFFHIHPKSKRPALIFLHLEAG--KATPFRH---QFTRLAIANFVTHT 263 (378)
Q Consensus 206 ~~--~~~f~~~~~~~~-------~~~~~i~~~~~~P~i~~~~~~~~--~~~~y~g---~~~~~~l~~fi~~~ 263 (378)
++ ++.|..+...+. .+.||++. .+|+++++...+. ....+.+ .++.+.|.+|++..
T Consensus 277 ~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~--~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 277 TDNPDLSIIWIDPDDFPLLVPYWEKTFDIDL--SAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp TTCTTCCEEEECGGGCTTTHHHHHHHHTCCT--TSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCceEEEEECCccchhHHHHHHHhcCCCC--CCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 66 689987744332 34589873 4899999987654 2344554 68999999999864
No 182
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.48 E-value=3.4e-14 Score=116.81 Aligned_cols=89 Identities=13% Similarity=0.178 Sum_probs=76.5
Q ss_pred cCCCcEEEEEecCCChh-HHhhHHHHHHHHHHhcC----CcEEEEEeCcCc----------------------------H
Q 017071 71 GKNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG----EADLVMVDAYLE----------------------------K 117 (378)
Q Consensus 71 ~~~~~~lv~F~a~wC~~-C~~~~p~~~~~~~~~~~----~~~~~~vd~~~~----------------------------~ 117 (378)
.++++++|+||++||++ |+.+.|.+.++++++++ ++.++.|+++.+ .
T Consensus 33 ~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~ 112 (172)
T 2k6v_A 33 FQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVR 112 (172)
T ss_dssp STTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHH
T ss_pred hCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHH
Confidence 37899999999999997 99999999999999874 699999998743 3
Q ss_pred HHHHHcCC---------------CCCcEEEEEeCCeEeeeeeCCC--CHHHHHHHHHHH
Q 017071 118 DLAKEYNI---------------LAYPTLYLFVAGVRQFQFFGER--TRDVISAWVREK 159 (378)
Q Consensus 118 ~~~~~~~v---------------~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~i~~~ 159 (378)
.++++|++ .++|+++++++|+++.++.|.. +.+.|.+.|+++
T Consensus 113 ~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 113 EAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 56677664 5789999999998899999988 899999988764
No 183
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.48 E-value=3.2e-12 Score=111.88 Aligned_cols=196 Identities=16% Similarity=0.251 Sum_probs=144.8
Q ss_pred CcEEcC-hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l~-~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+..|+ .+.++..+..+++++|-|+++| |....+.|.++|..+.+.+.|+.+. +.+++++|++.+ |++++|+
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEEC
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEc
Confidence 567784 6677788888889999999998 4567889999999998889999884 577999999997 9999998
Q ss_pred CC-------eEeeee-eCCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCCCC--c-----cHHHHH
Q 017071 136 AG-------VRQFQF-FGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEG--M-----ESEELA 200 (378)
Q Consensus 136 ~g-------~~~~~~-~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~--~-----~~~~~~ 200 (378)
.+ .....| .|..+.+.|.+||....-+.+.+++. +.+..+ ...+ .++.|+...+. . ....+.
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~-~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLI-QGKD-LLIAYYDVDYEKNAKGSNYWRNRVM 156 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-TTHHHH-SSSS-EEEEEECCBTTTBHHHHHHHHHHHH
T ss_pred chhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccc-ccHhhh-cCCC-eEEEEeecchhhcchhHHHHHHHHH
Confidence 43 234578 89999999999999999999999965 445555 3334 44555533221 1 234455
Q ss_pred HHh-ccCCc---eeEEEEc---cHHHHhhcCCCC-CCCCCeEEEeecCCCCccccCCCCCHHH--HHHHHHhc
Q 017071 201 AAS-KLHSD---VNFYQTT---SADVAEFFHIHP-KSKRPALIFLHLEAGKATPFRHQFTRLA--IANFVTHT 263 (378)
Q Consensus 201 ~~a-~~~~~---~~f~~~~---~~~~~~~~~i~~-~~~~P~i~~~~~~~~~~~~y~g~~~~~~--l~~fi~~~ 263 (378)
.+| +++++ +.|..+. ...+.+.||++. ...+|+++++... +....++++++.+. |.+|+++.
T Consensus 157 ~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 157 MVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQEEFSRDGKALERFLQDY 228 (252)
T ss_dssp HHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCcccCcchHHHHHHHHHH
Confidence 666 55555 8888763 345788899931 1358999998653 34445678888888 99999874
No 184
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.47 E-value=1.5e-13 Score=114.04 Aligned_cols=107 Identities=18% Similarity=0.173 Sum_probs=83.7
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHHH
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAK 121 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~ 121 (378)
++..+.+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. . .+.++
T Consensus 19 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~ 98 (180)
T 3kij_A 19 YAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFAR 98 (180)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHH
Confidence 344566667766654445789999999999999999999999999999988 69999998764 2 24555
Q ss_pred H-cCCC--------------------------CCcE----EEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 122 E-YNIL--------------------------AYPT----LYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 122 ~-~~v~--------------------------~~Pt----~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+ +++. ++|+ +++++ +|+++.++.|..+.+.+.+.|.+.+
T Consensus 99 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 99 KNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred HhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 5 5432 2677 77887 9999999999998888888877766
No 185
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.47 E-value=5.3e-14 Score=116.84 Aligned_cols=105 Identities=12% Similarity=0.080 Sum_probs=81.4
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHHHH-
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE- 122 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~~- 122 (378)
..+.+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. . .+.+++
T Consensus 32 f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~ 111 (181)
T 2p31_A 32 FKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRT 111 (181)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred eEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhh
Confidence 3455555555543334789999999999999999999999999999987 69999999863 1 123333
Q ss_pred c-----------------------CCCCCc-------EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 123 Y-----------------------NILAYP-------TLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 123 ~-----------------------~v~~~P-------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+ ++.++| ++++++ +|+++.++.|..+.++|.+.|++++
T Consensus 112 ~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 112 YSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp HCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 2 244578 888887 9999999999999999999988654
No 186
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.46 E-value=2.9e-13 Score=104.17 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=92.6
Q ss_pred HHhcCCccc--CCCHHHHHHhhccCCeEEEEEEcCCCCccHHHHHHHhccCCceeEEEEccHHHHhhcCCCCCCCCCeEE
Q 017071 158 EKMTLGTYS--ITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 158 ~~~~~~~~~--i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+..+|+... |++.++++++++.+++++|+||.++|++.++.|.++|...+++.|+++++++++++++++. |+++
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~~----~~vv 90 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTIC 90 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCCS----SCEE
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCCC----CeEE
Confidence 445666655 8999999999999999999999999999999999999544999999999999999999984 9999
Q ss_pred EeecCCCCccccCC----CCCHHHHHHHHHhcCC
Q 017071 236 FLHLEAGKATPFRH----QFTRLAIANFVTHTKH 265 (378)
Q Consensus 236 ~~~~~~~~~~~y~g----~~~~~~l~~fi~~~~~ 265 (378)
+|++.++....|+| +++.++|.+||..+.+
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 99998888889987 7899999999998753
No 187
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.19 E-value=5.5e-15 Score=117.63 Aligned_cols=86 Identities=19% Similarity=0.284 Sum_probs=68.8
Q ss_pred CcEEcChhcHHHHh-cCCC-cEEEEEecCCChhHHhhHHHHHHHHHHhc---CCcEEEEEeCcCc---------------
Q 017071 57 DVVSLNGKNFSEFM-GKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYLE--------------- 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~-~~~~-~~lv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~~vd~~~~--------------- 116 (378)
.+.+++++.+...- .+++ +++|+|||+||++|+.+.|.+.+++++++ .++.++.|+++++
T Consensus 8 ~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~ 87 (143)
T 2lus_A 8 KLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDW 87 (143)
Confidence 44455565555332 3577 99999999999999999999999999983 3788888887755
Q ss_pred ----------HHHHHHcCCCCCcEEEEEe-CCeEeee
Q 017071 117 ----------KDLAKEYNILAYPTLYLFV-AGVRQFQ 142 (378)
Q Consensus 117 ----------~~~~~~~~v~~~Pt~~~~~-~g~~~~~ 142 (378)
..++++|+|.++|++++++ +|+++.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (143)
T 2lus_A 88 LAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISM 124 (143)
Confidence 3689999999999999998 8976655
No 188
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.45 E-value=2e-13 Score=110.89 Aligned_cols=102 Identities=7% Similarity=0.142 Sum_probs=79.7
Q ss_pred CcEEcChhcHHHHhcCCC-cEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC------------------
Q 017071 57 DVVSLNGKNFSEFMGKNR-NVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------ 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~-~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~------------------ 115 (378)
.+.+++++.+...-..++ +++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 19 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~ 98 (160)
T 1xvw_A 19 TLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLL 98 (160)
T ss_dssp EEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred EeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEE
Confidence 444555554443223566 9999998 99999999999999999999976 79999998864
Q ss_pred -----cHHHHHHcCCC----CCc--EEEEEe-CCeEeeeeeCCC----CHHHHHHHHHH
Q 017071 116 -----EKDLAKEYNIL----AYP--TLYLFV-AGVRQFQFFGER----TRDVISAWVRE 158 (378)
Q Consensus 116 -----~~~~~~~~~v~----~~P--t~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~ 158 (378)
+..+++.|++. ++| ++++++ +|+++..+.|.. ..+.+.+.|.+
T Consensus 99 ~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 99 SDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp ECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 66789999999 999 888887 999988998865 34555555543
No 189
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.45 E-value=1.4e-13 Score=114.54 Aligned_cols=104 Identities=12% Similarity=0.003 Sum_probs=79.0
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------cH----HHHHHc
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------EK----DLAKEY 123 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~~----~~~~~~ 123 (378)
..+.+++++.+...-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++. .. +.++++
T Consensus 30 f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~ 109 (183)
T 2obi_A 30 FSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGY 109 (183)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTT
T ss_pred eEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHc
Confidence 3455566655543334789999999999999999999999999999987 69999998862 11 122222
Q ss_pred -------------------------------C-----CCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 124 -------------------------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 124 -------------------------------~-----v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+ |..+|++++++ +|+++.++.|..+.+.|.+.|+++
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 110 NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 33359999997 999999999998888888777654
No 190
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.44 E-value=1.7e-13 Score=114.18 Aligned_cols=103 Identities=13% Similarity=0.005 Sum_probs=78.9
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHHHHcC
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKEYN 124 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~~~~ 124 (378)
.+.+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. . .+.+++++
T Consensus 33 ~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 112 (185)
T 2gs3_A 33 SAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYN 112 (185)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTT
T ss_pred eeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcC
Confidence 455555555543334789999999999999999999999999999987 69999998863 1 22333333
Q ss_pred C-------------------------------C-----CCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHH
Q 017071 125 I-------------------------------L-----AYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 125 v-------------------------------~-----~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+ . .+|++++++ +|+++.++.|..+.++|.+.|+++
T Consensus 113 ~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 113 VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 2 2 258999997 999999999998888888877764
No 191
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.44 E-value=1.5e-13 Score=114.74 Aligned_cols=89 Identities=16% Similarity=0.252 Sum_probs=78.6
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------------------------cHHHHHHcC
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~ 124 (378)
++++++|+|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 6799999999 99999999999999999999976 79999998874 456889999
Q ss_pred CC------CCcEEEEEe-CCeEeeeeeCCC----CHHHHHHHHHHHh
Q 017071 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (378)
Q Consensus 125 v~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (378)
+. ++|++++++ +|+++..+.|.. +.+++.+.|+++.
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 999999997 999888888864 7888888888766
No 192
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.44 E-value=5e-13 Score=106.75 Aligned_cols=89 Identities=10% Similarity=0.084 Sum_probs=74.7
Q ss_pred cCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCcC--cHHHHHHcCCCCCcEEEEEe-C-CeEeeee
Q 017071 71 GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFV-A-GVRQFQF 143 (378)
Q Consensus 71 ~~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~-~-g~~~~~~ 143 (378)
.++|++||+||++||..|+.+.... .++++.++.++.++++|.+. ...++++|++.++|++++++ + |+.+..+
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEE
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeec
Confidence 5689999999999999999997765 55556665589999999875 35688999999999999998 5 7677777
Q ss_pred eCCCCHHHHHHHHHHHh
Q 017071 144 FGERTRDVISAWVREKM 160 (378)
Q Consensus 144 ~g~~~~~~l~~~i~~~~ 160 (378)
.| .+++++.++|.+.+
T Consensus 120 ~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 120 HQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp SS-CCHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHH
Confidence 66 89999999998876
No 193
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.44 E-value=1.7e-13 Score=115.49 Aligned_cols=89 Identities=13% Similarity=0.247 Sum_probs=78.6
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
++++++|+|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 6899999999 99999999999999999999876 69999998874 457889
Q ss_pred HcCCC-----CCcEEEEEe-CCeEeeeeeCCC----CHHHHHHHHHHHh
Q 017071 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (378)
Q Consensus 122 ~~~v~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (378)
+|++. ++|++++++ +|+++..+.|.. +.+++.+.|.++.
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 999999998 999888888865 6788988888765
No 194
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.43 E-value=3.4e-13 Score=113.32 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=79.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------------------------cHHHHHHcC
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~ 124 (378)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 6799999999 99999999999999999999987 79999998864 356888999
Q ss_pred CC-----CCcEEEEEe-CCeEeeeeeCCC----CHHHHHHHHHHHhc
Q 017071 125 IL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKMT 161 (378)
Q Consensus 125 v~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~~ 161 (378)
+. ++|++++++ +|+++..+.|.. +.+++.+.|+++..
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 99 999999998 999888888864 78999999988764
No 195
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.40 E-value=4.4e-11 Score=104.36 Aligned_cols=196 Identities=14% Similarity=0.146 Sum_probs=143.5
Q ss_pred CcEEcCh-hcHHHHhcC-CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEE
Q 017071 57 DVVSLNG-KNFSEFMGK-NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 57 ~v~~l~~-~~~~~~~~~-~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (378)
.+..|++ +++++.+.. +++++|-|+++|| ....+.|.++|+.+++.+.|+.+. +.+++++|++.+ |++++|
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEEE
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEEE
Confidence 5667754 788888877 8999999999985 578889999999998889999875 678999999998 999999
Q ss_pred eCC-------eEeeeee--CCCCHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEc-CCC---Cc----cHH
Q 017071 135 VAG-------VRQFQFF--GERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLH-DLE---GM----ESE 197 (378)
Q Consensus 135 ~~g-------~~~~~~~--g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~-~~~---~~----~~~ 197 (378)
+.+ .....|. |..+.+.|.+||....-+-+.+++. ++..+... ..+.++.|+. +.. .. ..+
T Consensus 80 k~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 80 QPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKT-SNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp CCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECT-TTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred ecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCc-cchhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 842 2345778 5789999999999999999999965 44555444 4555555654 222 11 245
Q ss_pred HHHHHh-ccCCceeEEEEc---cHHHHhhcCCCCCCCCCeEEEeecCCCCccccC-CCCCHHHHHHHHHhc
Q 017071 198 ELAAAS-KLHSDVNFYQTT---SADVAEFFHIHPKSKRPALIFLHLEAGKATPFR-HQFTRLAIANFVTHT 263 (378)
Q Consensus 198 ~~~~~a-~~~~~~~f~~~~---~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~-g~~~~~~l~~fi~~~ 263 (378)
.+..+| +++ ++.|..+. .....+.||++.....|.++++... +....+. +.++.+.|.+|++..
T Consensus 158 ~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~-~~ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 158 KVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDES-GKKFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp HHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTT-SCEEECCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCC-CceecCCcccCCHHHHHHHHHHH
Confidence 567777 566 88898764 3346678898742112577766543 3444555 678999999999864
No 196
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.39 E-value=1.3e-13 Score=105.65 Aligned_cols=87 Identities=15% Similarity=0.228 Sum_probs=66.4
Q ss_pred cHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc-----HHHHHHcCCCCCcEEEEEeCCeE
Q 017071 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLAKEYNILAYPTLYLFVAGVR 139 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~-----~~~~~~~~v~~~Pt~~~~~~g~~ 139 (378)
.++..+. ++++++ ||++||++|+.+.|.++++.. .+.++.||.+.+ ..++++|++.++||+ |.+|+.
T Consensus 12 ~~~~~~~-~~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~ 83 (116)
T 2e7p_A 12 KAKELAS-SAPVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQ 83 (116)
T ss_dssp HHHHHHT-SSSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred HHHHHHc-CCCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 3445553 456666 999999999999999988754 356666766665 569999999999999 558988
Q ss_pred eeeeeCCC---CHHHHHHHHHHH
Q 017071 140 QFQFFGER---TRDVISAWVREK 159 (378)
Q Consensus 140 ~~~~~g~~---~~~~l~~~i~~~ 159 (378)
+..+.|.. +.+.|.++|.+.
T Consensus 84 v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 84 IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECChHHHHHHHhCChHHHHHHHc
Confidence 88777765 666788888764
No 197
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.38 E-value=2.6e-12 Score=109.10 Aligned_cols=108 Identities=14% Similarity=0.135 Sum_probs=83.9
Q ss_pred ccCCCcEEcC-hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC--------c---HHH
Q 017071 53 LYAKDVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------E---KDL 119 (378)
Q Consensus 53 ~~~~~v~~l~-~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~--------~---~~~ 119 (378)
.++..+.+++ ++.+...-.+++++||+|||+||++|+ ++|.+++++++|++ ++.++.|+|++ . .+.
T Consensus 35 ~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f 113 (215)
T 2i3y_A 35 IYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPG 113 (215)
T ss_dssp GGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHH
T ss_pred cCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHH
Confidence 3444566666 665554445789999999999999999 99999999999976 79999998752 1 334
Q ss_pred HH------HcCCC--------------------------------C-----------------CcEEEEEe-CCeEeeee
Q 017071 120 AK------EYNIL--------------------------------A-----------------YPTLYLFV-AGVRQFQF 143 (378)
Q Consensus 120 ~~------~~~v~--------------------------------~-----------------~Pt~~~~~-~g~~~~~~ 143 (378)
++ +|++. + .|+.++++ +|+++.+|
T Consensus 114 ~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~ 193 (215)
T 2i3y_A 114 LKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRW 193 (215)
T ss_dssp HHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEE
T ss_pred HHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEe
Confidence 55 55431 0 16889998 99999999
Q ss_pred eCCCCHHHHHHHHHHHhc
Q 017071 144 FGERTRDVISAWVREKMT 161 (378)
Q Consensus 144 ~g~~~~~~l~~~i~~~~~ 161 (378)
.|..+.++|.+.|++++.
T Consensus 194 ~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 194 SHRATVSSVKTDILAYLK 211 (215)
T ss_dssp CTTSCHHHHHHHHHHHGG
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 999999999999988774
No 198
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.38 E-value=3.9e-13 Score=118.28 Aligned_cols=80 Identities=20% Similarity=0.322 Sum_probs=63.7
Q ss_pred cHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc------CcHHHHHHcCCCCCcEEEEEeCCe
Q 017071 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGV 138 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------~~~~~~~~~~v~~~Pt~~~~~~g~ 138 (378)
.+.+.+.+. .+|+||||||+||+++.|.|++++++++ .+||+ +++++|++|+|+++||+++ +|+
T Consensus 191 ~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~ 260 (291)
T 3kp9_A 191 GLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR 260 (291)
T ss_dssp HHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE
T ss_pred HHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE
Confidence 344444333 3689999999999999999999987653 34554 3789999999999999555 885
Q ss_pred EeeeeeCCCCHHHHHHHHH
Q 017071 139 RQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 139 ~~~~~~g~~~~~~l~~~i~ 157 (378)
+|.|.++.+++.+|+.
T Consensus 261 ---~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 261 ---TYTGVRSLEALAVASG 276 (291)
T ss_dssp ---EEESCCCHHHHHHHTC
T ss_pred ---EecCCCCHHHHHHHHC
Confidence 3999999999999985
No 199
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.38 E-value=3.3e-12 Score=104.39 Aligned_cols=104 Identities=10% Similarity=0.104 Sum_probs=81.9
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCC-ChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC-------------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~w-C~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~------------------- 115 (378)
..+.+.+++.+...-.++++++|.||++| |++|+.+.|.+.++++++ .++.++.|+.|.
T Consensus 27 f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~ 105 (167)
T 2jsy_A 27 FTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETL 105 (167)
T ss_dssp CEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEE
T ss_pred eEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEe
Confidence 34556666655433336899999999999 999999999999999999 688899888763
Q ss_pred ----cHHHHHHcCCCC------CcEEEEEe-CCeEeeeeeCC-----CCHHHHHHHHHHHh
Q 017071 116 ----EKDLAKEYNILA------YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVREKM 160 (378)
Q Consensus 116 ----~~~~~~~~~v~~------~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~~~ 160 (378)
+.++++.|++.. .|++++++ +|+++..+.|. .+.+++.+.|++++
T Consensus 106 ~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 106 SDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp EGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred eCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 356888999987 49999998 99888888763 24577887777654
No 200
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.38 E-value=1.6e-12 Score=109.30 Aligned_cols=90 Identities=20% Similarity=0.341 Sum_probs=77.4
Q ss_pred cCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHH
Q 017071 71 GKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLA 120 (378)
Q Consensus 71 ~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~ 120 (378)
.++++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +.+++
T Consensus 32 ~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 32 YKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred HCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 36899999999 99999999999999999999976 79999998874 24688
Q ss_pred HHcCCC------CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 121 KEYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 121 ~~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
+.|++. ++|++++++ +|+++..+.|. ++.+++.+.|....
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 999998 899999998 99888888774 46788888887664
No 201
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.36 E-value=1.9e-11 Score=106.23 Aligned_cols=144 Identities=12% Similarity=0.123 Sum_probs=98.2
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHhcC-Cc-EEEEEeCcC----------------------cHHHHHHcCC
Q 017071 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EA-DLVMVDAYL----------------------EKDLAKEYNI 125 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~-~~~p~~~~~~~~~~~-~~-~~~~vd~~~----------------------~~~~~~~~~v 125 (378)
++++++|+|| |+||++|+ .++|.+.++++++++ ++ .++.|+.+. +..++++||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 6889999999 99999999 999999999998876 78 899998753 2357888888
Q ss_pred C-----------CCcEEEEEeCCeEeeeeeCCC---------CHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEE
Q 017071 126 L-----------AYPTLYLFVAGVRQFQFFGER---------TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVL 185 (378)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g~~---------~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v 185 (378)
. ..|+++++++|++...+.|.. +.+++.+.+.... + ....++
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------i--~~~~i~ 173 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------Q--VQESIS 173 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------C--CCCCEE
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------c--ccceEE
Confidence 6 358877779998888887752 4444444442110 1 123356
Q ss_pred EEEcCCCCccHHHHHHHhccCCceeEEEEc-c---HHHHhhcCCCCCCCCCeEEE
Q 017071 186 GFLHDLEGMESEELAAASKLHSDVNFYQTT-S---ADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 186 ~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~-~---~~~~~~~~i~~~~~~P~i~~ 236 (378)
.|..++|......-..+....-.+...-+. + .++.+.++... .|.+++
T Consensus 174 ly~~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l~~~~g~~~---vP~~~~ 225 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHDKGLSFEEIILGHDATIVSVRAVSGRTT---VPQVFI 225 (241)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCCCEEEETTTTCCHHHHHHHTCCSS---SCEEEE
T ss_pred EEECCCChHHHHHHHHHHHcCCceEEEECCCchHHHHHHHHhCCCC---cCEEEE
Confidence 688899987655544444333344433321 1 34667777654 898763
No 202
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.36 E-value=2e-12 Score=108.99 Aligned_cols=106 Identities=13% Similarity=0.095 Sum_probs=80.5
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEecCCChh-HHhhHHHHHHHHHHhc----CCcEEEEEeCcC---------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK----GEADLVMVDAYL--------------- 115 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~~-C~~~~p~~~~~~~~~~----~~~~~~~vd~~~--------------- 115 (378)
..+.+.+++.+...-.++++++|+||++||++ |+.++|.+.++.+++. +++.++.|++|.
T Consensus 24 f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~ 103 (200)
T 2b7k_A 24 FHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDF 103 (200)
T ss_dssp CEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTS
T ss_pred EEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHc
Confidence 34556666555433347899999999999997 9999999999887775 378889888873
Q ss_pred -------------cHHHHHHcCCC-CCc---------------EEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 116 -------------EKDLAKEYNIL-AYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 116 -------------~~~~~~~~~v~-~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
...++++|||. +.| ++++++ +|+++..+.|..+.+.+.+.|.+.+.
T Consensus 104 ~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 104 HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13578889987 444 778887 99999999998888888888877764
No 203
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.36 E-value=4e-12 Score=104.56 Aligned_cols=105 Identities=18% Similarity=0.177 Sum_probs=80.1
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhcC---CcEEEEEeCcC---c-------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYL---E------------- 116 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~-~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~---~------------- 116 (378)
.+.+++++.+...-.++++++|+||++||+ +|+.+.|.+.++.+++++ ++.++.|+++. .
T Consensus 17 ~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~ 96 (174)
T 1xzo_A 17 TFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPL 96 (174)
T ss_dssp EEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCC
T ss_pred EEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 444455554442224789999999999999 999999999999998876 39999999862 1
Q ss_pred ------------HHHHHH----------------cCCCCCcEEEEEe-CCeEeeeeeCCC--CHHHHHHHHHHHhc
Q 017071 117 ------------KDLAKE----------------YNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (378)
Q Consensus 117 ------------~~~~~~----------------~~v~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (378)
.++++. |++...|++++++ +|+++.++.|.. +.+++.+.|++++.
T Consensus 97 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 97 SFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp CGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred CCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 122222 2456789999998 999999999976 58999999988763
No 204
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.34 E-value=1.6e-12 Score=111.19 Aligned_cols=89 Identities=18% Similarity=0.354 Sum_probs=76.9
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
++++++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 5799999999 99999999999999999999975 79999998763 346889
Q ss_pred HcCCC------CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
.|++. ++|++++++ +|+++..+.|. ++.+++.+.|+.+.
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999997 99888877765 56688888887765
No 205
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.34 E-value=2.6e-12 Score=108.47 Aligned_cols=89 Identities=17% Similarity=0.268 Sum_probs=77.1
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|++|. +.++++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 6799999999 99999999999999999999976 79999998864 346889
Q ss_pred HcCCC------CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
.|++. ++|++++++ +|+++..+.|. .+.+++.+.|+.+.
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999998 99888887764 45688888887765
No 206
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.34 E-value=2.4e-12 Score=107.81 Aligned_cols=89 Identities=20% Similarity=0.320 Sum_probs=76.0
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
++++++|+|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 6899999999 99999999999999999999975 78999998763 346889
Q ss_pred HcCCC-----CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 122 ~~~v~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
.||+. ++|++++++ +|+++..+.|. .+.+++.+.|+.+.
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 899999997 99888888774 35788888877654
No 207
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.33 E-value=4e-12 Score=108.16 Aligned_cols=89 Identities=18% Similarity=0.313 Sum_probs=76.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|++|. +.++++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 6899999999 99999999999999999999974 78888888764 356889
Q ss_pred HcCCC-----CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 122 ~~~v~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
+||+. .+|++++++ +|+++..+.|. ++.+++.+.|+.+.
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 899999998 99888887764 45888888887654
No 208
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.32 E-value=4.9e-12 Score=102.90 Aligned_cols=102 Identities=12% Similarity=0.166 Sum_probs=77.6
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC--------------------
Q 017071 58 VVSLNGKNFSEFMGKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------- 115 (378)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~F~a-~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------------------- 115 (378)
+.+.+++.+...-..+++++|+||+ +||++|+.++|.+.++.+++++ ++.++.|++|.
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d 99 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSD 99 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEEC
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEEC
Confidence 4445555554333367899999998 9999999999999999999876 68899998763
Q ss_pred -cHHHHHHcCCCC------------CcEEEEEe-CCeEeeeeeCCCC---HHHHHHHHHHH
Q 017071 116 -EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGERT---RDVISAWVREK 159 (378)
Q Consensus 116 -~~~~~~~~~v~~------------~Pt~~~~~-~g~~~~~~~g~~~---~~~l~~~i~~~ 159 (378)
+.++++.||+.. .|++++++ +|+++..+.|... .+++.+.|+++
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 100 GDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp TTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred CcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 346788899987 99999998 9988888866433 35555555443
No 209
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.32 E-value=6.1e-12 Score=106.32 Aligned_cols=104 Identities=11% Similarity=0.013 Sum_probs=80.3
Q ss_pred CCcEEcC-hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------c----HHHHH-
Q 017071 56 KDVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAK- 121 (378)
Q Consensus 56 ~~v~~l~-~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~- 121 (378)
..+.+++ ++.+...-.+++++||+|||+||++| .++|.+.++.++|++ ++.++.|+++. . .+.++
T Consensus 20 F~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~ 98 (207)
T 2r37_A 20 YGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKY 98 (207)
T ss_dssp CEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHH
T ss_pred eEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHh
Confidence 3455555 55554333478999999999999999 789999999999986 79999998752 1 23455
Q ss_pred -----HcCCC--------------------------------C-----------------CcEEEEEe-CCeEeeeeeCC
Q 017071 122 -----EYNIL--------------------------------A-----------------YPTLYLFV-AGVRQFQFFGE 146 (378)
Q Consensus 122 -----~~~v~--------------------------------~-----------------~Pt~~~~~-~g~~~~~~~g~ 146 (378)
++++. + .|+.++++ +|+++.+|.|.
T Consensus 99 ~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~ 178 (207)
T 2r37_A 99 VRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHR 178 (207)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTT
T ss_pred cchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCC
Confidence 55431 1 16889998 99999999999
Q ss_pred CCHHHHHHHHHHHh
Q 017071 147 RTRDVISAWVREKM 160 (378)
Q Consensus 147 ~~~~~l~~~i~~~~ 160 (378)
.+.+++.+.|++++
T Consensus 179 ~~~~~l~~~I~~ll 192 (207)
T 2r37_A 179 TTVSNVKMDILSYM 192 (207)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998876
No 210
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.32 E-value=3.6e-12 Score=94.52 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=66.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc--CcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCH
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTR 149 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 149 (378)
...+.++.||++||++|+.+.|.++++++ ++.|..+|++ ++++++++|| .++|++ +.+|+.. ..|..+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~ 84 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNT 84 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCH
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCH
Confidence 45678999999999999999999987643 4889999999 8899999999 999986 4578654 4566899
Q ss_pred HHHHHHHHHHh
Q 017071 150 DVISAWVREKM 160 (378)
Q Consensus 150 ~~l~~~i~~~~ 160 (378)
+.|.++|.+.+
T Consensus 85 ~~l~~~l~~~~ 95 (100)
T 1wjk_A 85 SKLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHHSSS
T ss_pred HHHHHHHHHHH
Confidence 99999997655
No 211
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.31 E-value=7.9e-12 Score=107.10 Aligned_cols=89 Identities=12% Similarity=0.325 Sum_probs=74.1
Q ss_pred cCCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHH
Q 017071 71 GKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLA 120 (378)
Q Consensus 71 ~~~~~~lv~F~a-~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~ 120 (378)
.++++++|+||+ +||++|+.++|.+.++++++++ ++.++.|++|. +..++
T Consensus 67 ~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 67 YRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp GTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred hCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 378999999997 9999999999999999999987 69999998874 23578
Q ss_pred HHcCCC------CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHH
Q 017071 121 KEYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREK 159 (378)
Q Consensus 121 ~~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~ 159 (378)
+.|++. ++|++++++ +|+++..+.|. ...+++.+.|...
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 899998 899999998 99888888775 3456666666543
No 212
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.30 E-value=5.7e-12 Score=103.83 Aligned_cols=101 Identities=10% Similarity=0.064 Sum_probs=75.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCC-ChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~w-C~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~-------------------- 115 (378)
.+.+++++.+...-.++++++|+||++| |++|+.++|.+.+++++ .++.++.|+.|.
T Consensus 28 ~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~ 105 (175)
T 1xvq_A 28 TLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPAS 105 (175)
T ss_dssp EEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEE
T ss_pred EEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEee
Confidence 4444555544322236899999999999 99999999999999988 578899998862
Q ss_pred --cHHHHHHcCCCCC---------cEEEEEe-CCeEeeeeeC--CCCHHHHHHHHHHH
Q 017071 116 --EKDLAKEYNILAY---------PTLYLFV-AGVRQFQFFG--ERTRDVISAWVREK 159 (378)
Q Consensus 116 --~~~~~~~~~v~~~---------Pt~~~~~-~g~~~~~~~g--~~~~~~l~~~i~~~ 159 (378)
+..+++.|++... |++++++ +|+++..+.| ..+...+.++|+..
T Consensus 106 D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l 163 (175)
T 1xvq_A 106 AFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAAL 163 (175)
T ss_dssp CTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHH
T ss_pred CCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHH
Confidence 3468899999887 8999998 9988888864 33333455554443
No 213
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.28 E-value=2.2e-11 Score=117.80 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=82.6
Q ss_pred EEcChhcHHHHhc-CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCC
Q 017071 59 VSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (378)
Q Consensus 59 ~~l~~~~~~~~~~-~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (378)
..++++.++.... .++..++.||++||++|+.+.|.+++++.++. ++.+..+|.+++++++++|+|.++||+++ +|
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 4567777776653 45677999999999999999999999999887 89999999999999999999999999977 88
Q ss_pred eEeeeeeCCCCHHHHHHHHHHH
Q 017071 138 VRQFQFFGERTRDVISAWVREK 159 (378)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~ 159 (378)
+.+.. |..+.++|.+|+.+.
T Consensus 179 ~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 179 KEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEE--SCCCHHHHHHHHCCS
T ss_pred EEEec--CCCCHHHHHHHHhhc
Confidence 76644 999999999998653
No 214
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.28 E-value=2.1e-12 Score=91.74 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=50.9
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-CcHHHHHHcCCCCCcEEEEEeCCeEe
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLYLFVAGVRQ 140 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~ 140 (378)
++.||++||++|+.+.|.+++++++++..+.++.||.+ ++.+++++||++++||+++ +|+.+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 67899999999999999999988776445666666655 5788999999999999877 88643
No 215
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.28 E-value=2.7e-12 Score=103.75 Aligned_cols=102 Identities=18% Similarity=0.261 Sum_probs=70.9
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~------------------- 115 (378)
.+.+.+++.+...-.++++++|+|| ++||++|+.++|.+.++.+++++ ++.++.|+.|.
T Consensus 14 ~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~ 93 (157)
T 4g2e_A 14 ELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILS 93 (157)
T ss_dssp EEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEE
T ss_pred EeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEE
Confidence 3445555554433347899999999 99999999999999999888877 78888887653
Q ss_pred --cHHHHHHcCCC-----------CCcEEEEEe-CCeEeeeeeC-----CCCHHHHHHHHHH
Q 017071 116 --EKDLAKEYNIL-----------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (378)
Q Consensus 116 --~~~~~~~~~v~-----------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (378)
+.+++++|||. ..|++++++ +|++...+.| ..+.+++.+.|+.
T Consensus 94 D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 94 DYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 34678888874 468899998 8987766543 3567778777754
No 216
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.27 E-value=2.9e-10 Score=105.65 Aligned_cols=194 Identities=12% Similarity=0.185 Sum_probs=128.3
Q ss_pred CcEEcCh-hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l~~-~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+..+++ ++++. +..++.++|.|++++|.++ .+.|.++|..+++.+.|+...+ ++++++++.++| +++..
T Consensus 119 ~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~---~~~f~~~A~~~~~~~~F~~~~~----~~~~~~~v~~~p-i~~~~ 189 (382)
T 2r2j_A 119 PIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDN---YRVFERVANILHDDCAFLSAFG----DVSKPERYSGDN-IIYKP 189 (382)
T ss_dssp CCEEC-------------CCEEEEEESCSSSHH---HHHHHHHHHHHTTTCEEEEEES----CC--------CE-EEEEC
T ss_pred CceecCCHHHHHH-hcCCCCEEEEEECCCCChh---HHHHHHHHHHhhccceEEEEeh----hhHHhhCCCCCc-eEECC
Confidence 4555643 45766 5677889999999987664 6789999999988888888876 367889999999 55544
Q ss_pred CC--eEeeeeeCCC-CHHHHHHHHHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCCCCccHHHH----HHHh-ccCC
Q 017071 136 AG--VRQFQFFGER-TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEEL----AAAS-KLHS 207 (378)
Q Consensus 136 ~g--~~~~~~~g~~-~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~----~~~a-~~~~ 207 (378)
.| .....|.|.+ +.+.|.+||.....+.+.++ +.+.+.++.....++++.|+.+++....+.| ..++ ..++
T Consensus 190 ~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~el-t~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (382)
T 2r2j_A 190 PGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREI-TFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG 268 (382)
T ss_dssp SSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEEC-CHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT
T ss_pred CCCCCcCcccCCCCCCHHHHHHHHHhcccCceEec-ChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC
Confidence 42 2457899998 99999999999998888888 5577777887777888888887654433444 3333 5567
Q ss_pred ceeEEEEc---cHHHHhhcCCCCCCCCCeEEEeecCCCCcccc---CCCCCHHHHHHHHHhc
Q 017071 208 DVNFYQTT---SADVAEFFHIHPKSKRPALIFLHLEAGKATPF---RHQFTRLAIANFVTHT 263 (378)
Q Consensus 208 ~~~f~~~~---~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y---~g~~~~~~l~~fi~~~ 263 (378)
++.|+.+. ...+.+.+|++. .++|+++++.... ...| .+.++.+.|.+|+++.
T Consensus 269 ~i~f~~id~~~~~~~~~~~gl~~-~~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 269 TINFLHADCDKFRHPLLHIQKTP-ADCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCG-GGCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHHH
T ss_pred eeEEEEEchHHhHHHHHHcCCCc-cCCCEEEEEcchh--cCCCCccccccCHHHHHHHHHHH
Confidence 88998764 345678899974 2479999876532 2223 3445678999999863
No 217
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.25 E-value=2.6e-12 Score=100.81 Aligned_cols=70 Identities=17% Similarity=0.275 Sum_probs=60.0
Q ss_pred HHHhhhcCcchhhhhhHhhcCCCCCCCcEEEEEcC-CCccccCC--CCCCHHHHHHHHHHHhcCce--eeeccCCchh
Q 017071 288 LHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN--GELTLSSIKSFGEEFLEDKL--LNQSDQISET 360 (378)
Q Consensus 288 ~f~~~d~~~~~~~~~l~~~~gi~~~~~p~i~i~~~-~~~~y~~~--~~~~~~~i~~Fi~~~~~Gkl--~~kSe~~p~~ 360 (378)
.|+++|.+. ..++++.||+.....|++++++. ++++|.+. |.++.+.|.+|++++++|++ ++||||+|++
T Consensus 56 ~f~~vd~d~---~~~~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 56 NFGTIDAKA---FGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp EEEEECTTT---TGGGTTTTTCCSSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred EEEEEchHH---hHHHHHHcCCCcccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 577777664 33678999998777899999976 67778886 89999999999999999999 9999999986
No 218
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.24 E-value=2.9e-11 Score=86.75 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=61.8
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcH----HHHHHcC--CCCCcEEEEEeCCeEeeeeeCCCCHH
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYN--ILAYPTLYLFVAGVRQFQFFGERTRD 150 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~--v~~~Pt~~~~~~g~~~~~~~g~~~~~ 150 (378)
++.||++||++|+.+.+.++++++++. ++.+..+|+++++ ++++++| +.++|++ +.+|+.+. | .+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~---~~ 73 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G---YT 73 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S---SH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C---HH
Confidence 678999999999999999999998866 6999999987764 8999999 9999998 34786543 2 26
Q ss_pred HHHHHHHHHh
Q 017071 151 VISAWVREKM 160 (378)
Q Consensus 151 ~l~~~i~~~~ 160 (378)
++.+++++.+
T Consensus 74 ~l~~~~~~~~ 83 (85)
T 1ego_A 74 DFAAWVKENL 83 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 7888887654
No 219
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.24 E-value=4.2e-11 Score=99.01 Aligned_cols=107 Identities=11% Similarity=0.066 Sum_probs=81.5
Q ss_pred ccCCCcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC---------------
Q 017071 53 LYAKDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------------- 115 (378)
Q Consensus 53 ~~~~~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~--------------- 115 (378)
.++..+.+.+++.+...-.++++++|.|| ++||++|..++|.+.++.+++++ ++.++.|.+|.
T Consensus 31 aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f 110 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTF 110 (179)
T ss_dssp HHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCS
T ss_pred CCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCce
Confidence 34456677777766644457889999998 99999999999999999999987 68888888763
Q ss_pred ------cHHHHHHcCCCC------------CcEEEEEe-CCeEeeeeeCCC---CHHHHHHHHHHH
Q 017071 116 ------EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGER---TRDVISAWVREK 159 (378)
Q Consensus 116 ------~~~~~~~~~v~~------------~Pt~~~~~-~g~~~~~~~g~~---~~~~l~~~i~~~ 159 (378)
+..+++.|++.. .|++++++ +|+++..+.|.. ..+++.+.|+++
T Consensus 111 ~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 111 PLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp CEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred EEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 345778888864 69999998 998887776543 345555555543
No 220
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.23 E-value=2.4e-11 Score=103.83 Aligned_cols=104 Identities=19% Similarity=0.295 Sum_probs=79.9
Q ss_pred CcEEc--Ch--hcHHHHhc-CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC--------------
Q 017071 57 DVVSL--NG--KNFSEFMG-KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------- 115 (378)
Q Consensus 57 ~v~~l--~~--~~~~~~~~-~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~-------------- 115 (378)
.+.++ ++ +.+...-. ++++++|+|| |+||++|+.++|.+.++++++++ ++.++.|++|.
T Consensus 35 ~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~ 114 (221)
T 2c0d_A 35 TAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEK 114 (221)
T ss_dssp EEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGG
T ss_pred EEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhh
Confidence 44444 44 44433223 6899999999 99999999999999999999865 78888887653
Q ss_pred --------------cHHHHHHcCC-----CCCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 116 --------------EKDLAKEYNI-----LAYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 116 --------------~~~~~~~~~v-----~~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
+..+++.||+ ..+|++++++ +|+++..+.|. .+.+++.+.|+.+.
T Consensus 115 ~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 115 GGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp TCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 1246778888 3689999998 99888887763 56788888887664
No 221
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.23 E-value=4.5e-11 Score=96.78 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=70.5
Q ss_pred CcEEcChhcHH--HHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-----------------
Q 017071 57 DVVSLNGKNFS--EFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~--~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------- 115 (378)
.+.+.+++.++ ....++++++|+|| ++||++|+.++|.+.++.+++++ + .++.|+++.
T Consensus 17 ~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~ 95 (159)
T 2a4v_A 17 SLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHL 95 (159)
T ss_dssp EEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEE
T ss_pred EEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceE
Confidence 34445554443 33223347899987 99999999999999999999976 5 888887653
Q ss_pred ----cHHHHHHcCCCCCc-------EEEEEeCCeEeeeeeCCCCHHHHHH
Q 017071 116 ----EKDLAKEYNILAYP-------TLYLFVAGVRQFQFFGERTRDVISA 154 (378)
Q Consensus 116 ----~~~~~~~~~v~~~P-------t~~~~~~g~~~~~~~g~~~~~~l~~ 154 (378)
+..+++.||+...| ++++ .+|+++..+.|.........
T Consensus 96 l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~~~~~~ 144 (159)
T 2a4v_A 96 LSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPEVSVND 144 (159)
T ss_dssp EECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHHHHHHH
T ss_pred EECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEccCCccccHHH
Confidence 34678899999998 5555 99999999988765543333
No 222
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.22 E-value=6.7e-11 Score=98.40 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=73.0
Q ss_pred CCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc-------------------------HHHHHHcC
Q 017071 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------KDLAKEYN 124 (378)
Q Consensus 72 ~~~~~lv~F~a-~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-------------------------~~~~~~~~ 124 (378)
++++++|+||+ +||++|+.++|.+.++++++++ ++.++.|+++.. ..+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 68999999995 9999999999999999998875 788888877532 24667788
Q ss_pred CC------CCcEEEEEe-CCeEeeeeeCCC----CHHHHHHHHHHHh
Q 017071 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (378)
Q Consensus 125 v~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (378)
+. ..|++++++ +|+++..+.|.. +.+++.+.|+.+.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 76 379999998 998888887753 6888888887665
No 223
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.22 E-value=7e-11 Score=96.76 Aligned_cols=107 Identities=9% Similarity=-0.002 Sum_probs=81.5
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhc---CCcEEEEEeCcC-----------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLK---GEADLVMVDAYL----------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~-~C~~~~p~~~~~~~~~~---~~~~~~~vd~~~----------------- 115 (378)
.+.+.+++.+...-.++++++|+||++||+ .|..++|.+.++.++++ .++.++.|.+|.
T Consensus 12 ~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~ 91 (170)
T 3me7_A 12 TLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGID 91 (170)
T ss_dssp EEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCC
T ss_pred EEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 445555555543333689999999999997 69999999999999985 368888887651
Q ss_pred --------------cHHHHHHcCC---------CCCcEEEEEe-CCeEeeeeeCC-CCHHHHHHHHHHHhcCC
Q 017071 116 --------------EKDLAKEYNI---------LAYPTLYLFV-AGVRQFQFFGE-RTRDVISAWVREKMTLG 163 (378)
Q Consensus 116 --------------~~~~~~~~~v---------~~~Pt~~~~~-~g~~~~~~~g~-~~~~~l~~~i~~~~~~~ 163 (378)
...++++||+ ...|++++++ +|+++..+.|. .+.+++.+.|.+....+
T Consensus 92 ~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 92 GKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp SSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred CCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 1245666663 4568999998 99888888885 78999999999887543
No 224
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.21 E-value=6.1e-11 Score=96.40 Aligned_cols=101 Identities=8% Similarity=0.065 Sum_probs=75.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a-~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~-------------------- 115 (378)
.+.+.+++.+...-.++++++|+||+ +||++|..++|.+.++++++ .++.++.|++|.
T Consensus 26 ~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~ 104 (163)
T 1psq_A 26 SLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLS 104 (163)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEE
T ss_pred EEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEec
Confidence 34445555444333478999999995 99999999999999999888 678888877642
Q ss_pred ---cHHHHHHcCCC----C--CcEEEEEe-CCeEeeeeeCC-----CCHHHHHHHHHH
Q 017071 116 ---EKDLAKEYNIL----A--YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVRE 158 (378)
Q Consensus 116 ---~~~~~~~~~v~----~--~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~ 158 (378)
+..+++.||+. + .|++++++ +|+++..+.|. .+.+++.+.|++
T Consensus 105 D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 105 DYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp CTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred CCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 34577788887 4 39999998 99888888763 344677766653
No 225
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2e-10 Score=102.77 Aligned_cols=179 Identities=9% Similarity=0.130 Sum_probs=124.3
Q ss_pred CCcccCCCHHHHHHhhc-cCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE-----ccHHHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILT-VESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT-----TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~-~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~-----~~~~~~~~~~i~~~~~~ 231 (378)
..+.++ +.+++++.+. .+.+++|.|+++||++. .+.+.+++ .+.+.+.++.+ .+.+++++|++.. +
T Consensus 17 ~~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~---~ 92 (298)
T 3ed3_A 17 PHISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG---F 92 (298)
T ss_dssp TTCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB---S
T ss_pred CCeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc---c
Confidence 345666 6788888884 56789999999999974 45566766 55556777654 3678999999987 9
Q ss_pred CeEEEeecCC----------------CCccccCCCCCHHHHHHHHHhcCCCceEEecc-cchhhhhccc-hHHH------
Q 017071 232 PALIFLHLEA----------------GKATPFRHQFTRLAIANFVTHTKHPLVVTLTI-HNAQFVFQDP-RKQL------ 287 (378)
Q Consensus 232 P~i~~~~~~~----------------~~~~~y~g~~~~~~l~~fi~~~~~P~~~~l~~-~~~~~~~~~~-~~~l------ 287 (378)
|++++|+.+. .....|.|.++.+.|.+|+.+..-|.+.+++. +.+..+.... .+.+
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~~ 172 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQ 172 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEESS
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcCC
Confidence 9999999864 13678999999999999999999899999854 5566555442 2211
Q ss_pred ------------------HHHhhhcCcchhhhhhH--hhcC-----C-----------CCCCCcEEEEEcC-CCccccCC
Q 017071 288 ------------------LHVYVEMNSEGVGRRVS--QEFG-----V-----------SGNAPRVIAYSAR-DAKKYVLN 330 (378)
Q Consensus 288 ------------------~f~~~d~~~~~~~~~l~--~~~g-----i-----------~~~~~p~i~i~~~-~~~~y~~~ 330 (378)
.|..++ +...+ .+. +.++ + .....|++++++. .++.+.|+
T Consensus 173 ~~~~~~f~~~A~~~~~~~~F~~v~--~~~~a-~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~ 249 (298)
T 3ed3_A 173 DKISPVYKSIALDWLGKFDFYSIS--NKKLK-QLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYE 249 (298)
T ss_dssp SSCCHHHHHHHHHTBTTEEEEEEE--GGGCC-CCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECC
T ss_pred CcchHHHHHHHHHhhcCcEEEEEc--chHhh-hhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEec
Confidence 111111 00000 000 1122 1 1145799999987 67777888
Q ss_pred C-CCCHHHHHHHHHHHhc
Q 017071 331 G-ELTLSSIKSFGEEFLE 347 (378)
Q Consensus 331 ~-~~~~~~i~~Fi~~~~~ 347 (378)
+ .++.+.|.+||.+-.+
T Consensus 250 g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 250 GNSINKNDISKFLRDTFS 267 (298)
T ss_dssp CSSCCHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHhhcC
Confidence 5 8999999999986544
No 226
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.20 E-value=1.1e-11 Score=100.97 Aligned_cols=105 Identities=14% Similarity=0.253 Sum_probs=80.6
Q ss_pred CcEEcChhcH--HHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC-----------------
Q 017071 57 DVVSLNGKNF--SEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~--~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------- 115 (378)
.+.+.+++.+ .....++++++|.|| ++||++|..++|.+.++.+++++ ++.++.|+.|.
T Consensus 15 ~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~ 94 (164)
T 4gqc_A 15 TLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNL 94 (164)
T ss_dssp EEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEE
T ss_pred EeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccce
Confidence 4455555544 345568899999998 99999999999999999988877 78888888653
Q ss_pred ----cHHHHHHcCCC----------CCcEEEEEe-CCeEeeeeeC-----CCCHHHHHHHHHHHhc
Q 017071 116 ----EKDLAKEYNIL----------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREKMT 161 (378)
Q Consensus 116 ----~~~~~~~~~v~----------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~~~ 161 (378)
+.+++++|||. ..|++++++ +|++...+.+ ..+.+++.+.++++.+
T Consensus 95 l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 95 LSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred eecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 34678889884 378999998 9988776654 3467888888877654
No 227
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.19 E-value=5e-11 Score=101.18 Aligned_cols=89 Identities=12% Similarity=0.308 Sum_probs=73.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc----------------------------HHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~~ 121 (378)
++++++|+|| ++||++|..++|.+.++++++++ ++.++.|++|.. ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 6899999999 99999999999999999999976 788888876531 24677
Q ss_pred HcCCC------CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
.||+. .+|++++++ +|+++..+.|. .+.+++.+.|+.+.
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 88884 699999998 99888887664 46788888887654
No 228
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.16 E-value=8.1e-11 Score=101.84 Aligned_cols=89 Identities=13% Similarity=0.288 Sum_probs=73.5
Q ss_pred cCCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHH
Q 017071 71 GKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLA 120 (378)
Q Consensus 71 ~~~~~~lv~F~a-~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~ 120 (378)
.++++++|+||+ +||++|..++|.+.++++++++ ++.++.|++|. +.+++
T Consensus 75 ~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~ 154 (240)
T 3qpm_A 75 YRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS 154 (240)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred hCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH
Confidence 368999999999 9999999999999999999986 78888888753 23577
Q ss_pred HHcCCC------CCcEEEEEe-CCeEeeeeeC----CCCHHHHHHHHHHH
Q 017071 121 KEYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (378)
Q Consensus 121 ~~~~v~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (378)
+.||+. .+|++++++ +|+++..+.| ..+.+++.+.|..+
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 889987 689999998 9988777665 35677777777654
No 229
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.15 E-value=9e-11 Score=100.00 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=64.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEe---------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--------------------------------------- 112 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd--------------------------------------- 112 (378)
+++++++.||++||++|+++.|.++++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999998763 34443322
Q ss_pred -C----cCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 113 -A----YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 113 -~----~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
| +++.++++++||+++||+ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 1 234668899999999998 556773 5679999999999997654
No 230
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.14 E-value=9.6e-11 Score=96.04 Aligned_cols=101 Identities=15% Similarity=0.120 Sum_probs=74.5
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~-------------------- 115 (378)
.+.+.+++.+...-.++++++|+|| ++||++|+.+.|.+.++.+++ .++.++.|++|.
T Consensus 31 ~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~ 109 (171)
T 2yzh_A 31 VVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVAS 109 (171)
T ss_dssp EEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEE
T ss_pred EEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEee
Confidence 3444555544322236889999999 899999999999999999888 678888887643
Q ss_pred ---cHHHHHHcCCCC---------CcEEEEEe-CCeEeeeeeC-----CCCHHHHHHHHHHH
Q 017071 116 ---EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREK 159 (378)
Q Consensus 116 ---~~~~~~~~~v~~---------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~ 159 (378)
+..+ +.||+.. .|++++++ +|+++..+.| ..+.+++.+.|+++
T Consensus 110 D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 110 DFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 2345 6777652 69999998 9988888864 34567777777653
No 231
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.13 E-value=2.6e-10 Score=93.78 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=67.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC--------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~-------------------------------------- 113 (378)
.++++++.||.+||++|+.+.|.+.++.+++++ +.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999999998765 54444442
Q ss_pred -------------------------------cCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 114 -------------------------------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 114 -------------------------------~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+.+..+++++||.|+||+++ +|+ .+.|..+.+.|.+.|.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHH
Confidence 22345678899999999987 774 6679999999999998765
No 232
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.12 E-value=1.9e-10 Score=93.79 Aligned_cols=100 Identities=9% Similarity=0.057 Sum_probs=74.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~-------------------- 115 (378)
.+.+++++.+...-.++++++|+|| +.||++|..++|.+.+++++ .++.++.|+.|.
T Consensus 30 ~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~ 107 (166)
T 3p7x_A 30 TVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLS 107 (166)
T ss_dssp EEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEE
T ss_pred EEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEcc
Confidence 4555555555433347899999999 78999999999999999877 468888887642
Q ss_pred ---cHHHHHHcCCCC------CcEEEEEe-CCeEeeeeeC-----CCCHHHHHHHHHH
Q 017071 116 ---EKDLAKEYNILA------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (378)
Q Consensus 116 ---~~~~~~~~~v~~------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (378)
+.++++.||+.. .|++++++ +|+++..+.+ ..+.+++.+.|++
T Consensus 108 D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 108 DHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 346778888875 89999998 9988777543 3455677666643
No 233
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.12 E-value=2e-10 Score=93.57 Aligned_cols=88 Identities=8% Similarity=-0.024 Sum_probs=67.8
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--------------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------------------- 115 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~-------------------- 115 (378)
.+.+.+++.+...-.++++++|+|| ++||++|..++|.+.++++++ .++.++.|+.|.
T Consensus 27 ~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~ 105 (165)
T 1q98_A 27 ILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVS 105 (165)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEE
T ss_pred EEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEee
Confidence 3444555544322246899999999 899999999999999999998 677888776532
Q ss_pred ---cHHHHHHcCCCC---------CcEEEEEe-CCeEeeeeeC
Q 017071 116 ---EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFFG 145 (378)
Q Consensus 116 ---~~~~~~~~~v~~---------~Pt~~~~~-~g~~~~~~~g 145 (378)
+..+++.||+.. .|++++++ +|+++..+.|
T Consensus 106 D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 106 TFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 356788888864 49999998 9988888865
No 234
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.09 E-value=3.8e-10 Score=93.36 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=66.2
Q ss_pred CCcEEc--Ch-hcHHHHh-cCCCc-EEEEEecCCChhHHh-hHHHHHHHHHHhcC-CcE-EEEEeCcC------------
Q 017071 56 KDVVSL--NG-KNFSEFM-GKNRN-VMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EAD-LVMVDAYL------------ 115 (378)
Q Consensus 56 ~~v~~l--~~-~~~~~~~-~~~~~-~lv~F~a~wC~~C~~-~~p~~~~~~~~~~~-~~~-~~~vd~~~------------ 115 (378)
..+.++ ++ +.+...- .++++ +|+.||++||++|+. ++|.+.++++++++ ++. ++.|+.+.
T Consensus 35 f~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~ 114 (184)
T 3uma_A 35 ATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSG 114 (184)
T ss_dssp CEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred cEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhC
Confidence 345555 44 4444222 35665 556677999999999 89999999999976 687 88888753
Q ss_pred -----------cHHHHHHcCCC-----------CCcEEEEEeCCeEeeeeeCC
Q 017071 116 -----------EKDLAKEYNIL-----------AYPTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 116 -----------~~~~~~~~~v~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (378)
+.+++++||+. ..|+++++++|++...+.|.
T Consensus 115 ~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~ 167 (184)
T 3uma_A 115 GMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEE 167 (184)
T ss_dssp CTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECS
T ss_pred CCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeC
Confidence 23578888885 35888888999888877654
No 235
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.09 E-value=3.5e-10 Score=92.15 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=60.9
Q ss_pred CCCcEEEEEe-cCCChhHHh-hHHHHHHHHHHhcC-Cc-EEEEEeCcC-----------------------cHHHHHHcC
Q 017071 72 KNRNVMVMFY-ANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKDLAKEYN 124 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~-~~p~~~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~~~~~~~ 124 (378)
++++++|+|| ++||++|+. ++|.+.++++++++ ++ .++.|+.+. +.+++++||
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~g 109 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVD 109 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcC
Confidence 6788888886 999999999 99999999998875 78 899888653 245777888
Q ss_pred CCCC-----------cEEEEEeCCeEeeeeeCC
Q 017071 125 ILAY-----------PTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 125 v~~~-----------Pt~~~~~~g~~~~~~~g~ 146 (378)
+... |+++++++|++...+.+.
T Consensus 110 v~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 110 MELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp CEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 8654 888888999888777664
No 236
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.09 E-value=3.5e-10 Score=97.79 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=76.3
Q ss_pred HHHhcCCCc-EEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC---------------------------cH
Q 017071 67 SEFMGKNRN-VMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------------EK 117 (378)
Q Consensus 67 ~~~~~~~~~-~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~---------------------------~~ 117 (378)
...+.++++ +|+.||++||++|..+.|.+.++++++++ ++.++.|++|. +.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 334335675 56688999999999999999999999976 79999998864 34
Q ss_pred HHHHHcCCC-------CCcEEEEEe-CCeEeeeeeCC----CCHHHHHHHHHHHh
Q 017071 118 DLAKEYNIL-------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (378)
Q Consensus 118 ~~~~~~~v~-------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (378)
.+++.||+. ++|++++++ +|++...+.|. ++.+++.+.|..+.
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 688899997 899999998 99887777664 57899998887764
No 237
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.08 E-value=3.2e-10 Score=92.02 Aligned_cols=75 Identities=11% Similarity=0.045 Sum_probs=62.0
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHhcC-CcE-EEEEeCcC-----------------------cHHHHHHcC
Q 017071 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~-~~~p~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 124 (378)
++++++|+|| ++||++|. .+.|.+.++++++++ ++. ++.|+.+. +.+++++||
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 6889999999 89999999 999999999998864 677 77776542 345788888
Q ss_pred CC------C-----CcEEEEEeCCeEeeeeeCC
Q 017071 125 IL------A-----YPTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 125 v~------~-----~Pt~~~~~~g~~~~~~~g~ 146 (378)
+. + .|+++++++|++...+.|.
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 86 3 8999999999887777765
No 238
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.07 E-value=1.7e-10 Score=100.42 Aligned_cols=89 Identities=12% Similarity=0.277 Sum_probs=72.5
Q ss_pred cCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHH
Q 017071 71 GKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLA 120 (378)
Q Consensus 71 ~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~ 120 (378)
.++++++|+|| ++||++|..++|.+.++++++++ ++.++.|++|. +..++
T Consensus 89 ~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va 168 (254)
T 3tjj_A 89 YRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS 168 (254)
T ss_dssp GTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHH
T ss_pred HCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHH
Confidence 36899999999 99999999999999999999986 78888888753 23577
Q ss_pred HHcCCC------CCcEEEEEe-CCeEeeeeeC----CCCHHHHHHHHHHH
Q 017071 121 KEYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (378)
Q Consensus 121 ~~~~v~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (378)
+.||+. .+|++++++ +|++...+.| .++.+++.+.|..+
T Consensus 169 ~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 169 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 888885 589999998 9988777665 45667777777643
No 239
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.06 E-value=1.1e-09 Score=89.54 Aligned_cols=107 Identities=15% Similarity=0.180 Sum_probs=76.7
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhcC---CcEEEEEeCcCc---H----HHHHH
Q 017071 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYLE---K----DLAKE 122 (378)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~F~a~wC~-~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~---~----~~~~~ 122 (378)
++..+.+.+++.+...-.+||+++|+||++||+ .|...++.+.++.+.++. ++.++.|.+|.+ + +.+++
T Consensus 13 PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~ 92 (170)
T 4hde_A 13 ETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQK 92 (170)
T ss_dssp CCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT
T ss_pred CCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHH
Confidence 344666777776665445899999999999996 799999999998887753 688888877521 1 11222
Q ss_pred cC------------------------------------CCCCcEEEEEe-CCeEeeeeeCC--CCHHHHHHHHHHHh
Q 017071 123 YN------------------------------------ILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKM 160 (378)
Q Consensus 123 ~~------------------------------------v~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~ 160 (378)
|+ +...|++++++ +|+++..|.|. .+.+.+.+-|++++
T Consensus 93 ~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 93 FTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp TCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 22 22347889998 99888889874 45677877777654
No 240
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.04 E-value=8.6e-10 Score=92.69 Aligned_cols=89 Identities=8% Similarity=0.031 Sum_probs=69.3
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC-------------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~------------------- 115 (378)
..+.+.+++.+...-.++++++|+|| ++||++|..++|.+.++++++ .++.++.|.+|.
T Consensus 61 f~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l 139 (200)
T 3zrd_A 61 FTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVITL 139 (200)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEE
T ss_pred eEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCceEE
Confidence 34555666555433347899999999 689999999999999999999 578888887642
Q ss_pred ----cHHHHHHcCCC---------CCcEEEEEe-CCeEeeeeeC
Q 017071 116 ----EKDLAKEYNIL---------AYPTLYLFV-AGVRQFQFFG 145 (378)
Q Consensus 116 ----~~~~~~~~~v~---------~~Pt~~~~~-~g~~~~~~~g 145 (378)
+..+++.||+. ..|++++++ +|+++..+.|
T Consensus 140 ~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 140 STLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp ETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEec
Confidence 35678888885 269999998 9988877654
No 241
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=99.04 E-value=4.7e-10 Score=95.12 Aligned_cols=80 Identities=11% Similarity=0.179 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC--------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~-------------------------------------- 113 (378)
.++++++.||++||++|+++.|.++++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 457899999999999999999999997652 243332211
Q ss_pred ------cCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHH
Q 017071 114 ------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (378)
Q Consensus 114 ------~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (378)
+++.++++++||+|+||+++ .+|+ .+.|..+.+.|.++|.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHh
Confidence 13456788999999999988 7784 67899999999999875
No 242
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.04 E-value=7.3e-10 Score=90.65 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=67.6
Q ss_pred EcChhcHHHHh-cCCCcEEE-EEecCCChhHH-hhHHHHHHHHHHhcC-CcEEEE-EeCcC-------------------
Q 017071 60 SLNGKNFSEFM-GKNRNVMV-MFYANWCYWSK-KLAPEFAAAAKMLKG-EADLVM-VDAYL------------------- 115 (378)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~lv-~F~a~wC~~C~-~~~p~~~~~~~~~~~-~~~~~~-vd~~~------------------- 115 (378)
+.+++.+...- .++++++| .||++||++|. .++|.|.++++++++ ++.++. |..+.
T Consensus 29 ~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~ 108 (173)
T 3mng_A 29 GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRL 108 (173)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEE
T ss_pred CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEE
Confidence 45555554322 36775555 55699999999 599999999999876 677765 66543
Q ss_pred ----cHHHHHHcCCC-------------CCcEEEEEeCCeEeeeeeCC----CCHHHHHHHH
Q 017071 116 ----EKDLAKEYNIL-------------AYPTLYLFVAGVRQFQFFGE----RTRDVISAWV 156 (378)
Q Consensus 116 ----~~~~~~~~~v~-------------~~Pt~~~~~~g~~~~~~~g~----~~~~~l~~~i 156 (378)
+.+++++||+. ..|+++++++|++...+.+. ++.++..+.|
T Consensus 109 l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl 170 (173)
T 3mng_A 109 LADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNII 170 (173)
T ss_dssp EECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHH
T ss_pred EECCChHHHHHhCCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHH
Confidence 34678889886 35999999999887777663 3444444443
No 243
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.01 E-value=1.6e-09 Score=80.82 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=76.9
Q ss_pred cccCCCHHHHHHhhcc--CCeEEEEEEcCCCCc---cHHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAERILTV--ESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~--~~~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+.+|.+.+++++.+.. ++.++|.|+++||++ ..+.+.+++....++.|+.+ .+++++++|++.. +||++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~---~PT~~ 78 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIAC---MPTFL 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCB---SSEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCe---ecEEE
Confidence 4578899999988865 578899999999997 44567777766677888765 5788999999997 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
+|+++. ....+.| .+.++|.+||++|+
T Consensus 79 ~~~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 79 FMKNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp EEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred EEECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 998763 4456677 48899999999874
No 244
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.00 E-value=1.6e-09 Score=88.62 Aligned_cols=75 Identities=13% Similarity=0.110 Sum_probs=57.2
Q ss_pred CC-CcEEEEEecCCChhHHhh-HHHHHHHHHHhcC-CcE-EEEEeCcC-----------------------cHHHHHHcC
Q 017071 72 KN-RNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (378)
Q Consensus 72 ~~-~~~lv~F~a~wC~~C~~~-~p~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 124 (378)
++ +++|++||++||++|+.+ +|.+.++++++++ ++. ++.|+.+. +..++++||
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 121 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLE 121 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHT
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhC
Confidence 45 477889999999999999 9999999998875 687 88887653 234667777
Q ss_pred CCC-----------CcEEEEEeCCeEeeeeeCC
Q 017071 125 ILA-----------YPTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 125 v~~-----------~Pt~~~~~~g~~~~~~~g~ 146 (378)
+.. .|+.+++++|++...+.|.
T Consensus 122 v~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 122 LTTDLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred CccccccccCCcccceeEEEEECCEEEEEEeec
Confidence 752 4566666699888777764
No 245
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.97 E-value=2e-09 Score=89.86 Aligned_cols=87 Identities=16% Similarity=0.218 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------------------------------------- 114 (378)
.++++++.||.+||++|+.+.|.+.++.+++.+++.|..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 4688999999999999999999999999999877777755541
Q ss_pred ------------------------------------CcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHH
Q 017071 115 ------------------------------------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (378)
Q Consensus 115 ------------------------------------~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (378)
.+...++++||.|+||+++ +|+......|..+.+.+.+.|..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~ 181 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADY 181 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHH
Confidence 0123456789999999987 88766666688999999998887
Q ss_pred Hh
Q 017071 159 KM 160 (378)
Q Consensus 159 ~~ 160 (378)
++
T Consensus 182 l~ 183 (192)
T 3h93_A 182 LI 183 (192)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 246
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.93 E-value=7.5e-09 Score=88.44 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=68.7
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc-------------------------------HHHHHH
Q 017071 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------------KDLAKE 122 (378)
Q Consensus 75 ~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-------------------------------~~~~~~ 122 (378)
.+|+.|||+||++|..+.|.+.++++++++ ++.++.|.+|.. .++++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 567777999999999999999999999976 788888877532 246677
Q ss_pred cCCC------------CCcEEEEEe-CCeEeeeeeC----CCCHHHHHHHHHHHh
Q 017071 123 YNIL------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREKM 160 (378)
Q Consensus 123 ~~v~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~~ 160 (378)
||+. .+|++++++ +|++...+.| .++.+++.+.|+.+.
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8873 379999998 8988877765 357888888887654
No 247
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.93 E-value=1.2e-09 Score=77.34 Aligned_cols=70 Identities=11% Similarity=0.179 Sum_probs=53.2
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHH---HcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHH
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~---~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (378)
++.||++||++|++..+.+++. ++.+..+|+++++++.+ ++|+.++|++ +.+|+. .|..+.+.|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~----~~g~~~~~l~ 70 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS----WSGFRPDMIN 70 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE----EESCCHHHHG
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE----EecCCHHHHH
Confidence 5779999999999999998863 57788899998766554 5899999998 347753 2335677776
Q ss_pred HHHHH
Q 017071 154 AWVRE 158 (378)
Q Consensus 154 ~~i~~ 158 (378)
+++.+
T Consensus 71 ~~l~~ 75 (81)
T 1h75_A 71 RLHPA 75 (81)
T ss_dssp GGSCC
T ss_pred HHHhc
Confidence 66643
No 248
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.92 E-value=4.9e-09 Score=90.70 Aligned_cols=85 Identities=13% Similarity=0.217 Sum_probs=65.7
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC---------------------------------------
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA--------------------------------------- 113 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~--------------------------------------- 113 (378)
++.+++.|+.+||++|+++.|.+.++.+. +++.+..+..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 46789999999999999999999987764 3565554432
Q ss_pred -----------cCcHHHHHHcCCCCCcEEEEEe-CCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 114 -----------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 114 -----------~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+++..+++++||+++||+++.+ +|+ .....|..+.+.|.++|.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 1234567899999999999988 684 367889999999999887654
No 249
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.91 E-value=7.1e-09 Score=72.05 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=54.1
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHH---HcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHH
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~---~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (378)
++.|+++||++|++..+.++++ ++.+..+|+++++++.+ ++++.++|++++ +|+. . |..+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~-~g~~~~~l~ 70 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---W-SGFRPERIK 70 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---E-ESCCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---E-cCCCHHHHH
Confidence 5779999999999999998864 47788899998876665 899999999873 7743 3 335778887
Q ss_pred HHH
Q 017071 154 AWV 156 (378)
Q Consensus 154 ~~i 156 (378)
+++
T Consensus 71 ~~l 73 (75)
T 1r7h_A 71 QLQ 73 (75)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 250
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.91 E-value=1.3e-09 Score=81.52 Aligned_cols=72 Identities=14% Similarity=0.092 Sum_probs=51.6
Q ss_pred cHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc-------HHHHHHcCCCCCcEEEEEeCC
Q 017071 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLFVAG 137 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~~~~~~g 137 (378)
.+++.+..++ ++.|+++||++|+...+.++++...++ . +..+|++.+ ..+++.+|+.++|++ |.+|
T Consensus 4 ~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g 76 (105)
T 1kte_A 4 FVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG-L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGK 76 (105)
T ss_dssp HHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT-S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETT
T ss_pred HHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC-c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECC
Confidence 4555664443 667999999999999999988654443 2 555676665 357889999999997 4488
Q ss_pred eEeeee
Q 017071 138 VRQFQF 143 (378)
Q Consensus 138 ~~~~~~ 143 (378)
+.+..+
T Consensus 77 ~~i~g~ 82 (105)
T 1kte_A 77 ECIGGC 82 (105)
T ss_dssp EEEESH
T ss_pred EEEecc
Confidence 655433
No 251
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.89 E-value=5.5e-09 Score=87.41 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=39.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY 114 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~ 114 (378)
.++++++.||++||++|+.+.|.+.++.+++.+++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 5788999999999999999999999999999878888888764
No 252
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.89 E-value=3.2e-08 Score=75.85 Aligned_cols=95 Identities=14% Similarity=0.192 Sum_probs=80.3
Q ss_pred CcEEc-ChhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEe
Q 017071 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 57 ~v~~l-~~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (378)
.+..| +.++++..+..+++++|-|+++||++| .+.|.++|+.+ +.+.|+.++ +++++++|++. .|++++|+
T Consensus 22 ~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vvlfk 93 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTICLFR 93 (124)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEEEEE
T ss_pred cceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEEEEE
Confidence 45556 456788888888999999999999999 77899999999 789999886 47899999999 79999999
Q ss_pred CC-eEeeeeeC----CCCHHHHHHHHHHH
Q 017071 136 AG-VRQFQFFG----ERTRDVISAWVREK 159 (378)
Q Consensus 136 ~g-~~~~~~~g----~~~~~~l~~~i~~~ 159 (378)
++ .....|.| ..+.+.|.+||...
T Consensus 94 kfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 94 LVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp TTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred cCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 65 34567886 78999999999864
No 253
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.88 E-value=5.6e-09 Score=88.96 Aligned_cols=89 Identities=9% Similarity=0.105 Sum_probs=69.9
Q ss_pred CCC--cEEEEEecCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc----------------------------HHHH
Q 017071 72 KNR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLA 120 (378)
Q Consensus 72 ~~~--~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~ 120 (378)
.++ .+|+.|||+||+.|..++|.+.++++++++ ++.++.|.+|.. ..++
T Consensus 29 ~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va 108 (220)
T 1xcc_A 29 IENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELA 108 (220)
T ss_dssp TTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHH
T ss_pred cCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHH
Confidence 455 555567999999999999999999999977 788888887632 3467
Q ss_pred HHcCCC------------CCcEEEEEe-CCeEeeeeeC----CCCHHHHHHHHHHHh
Q 017071 121 KEYNIL------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREKM 160 (378)
Q Consensus 121 ~~~~v~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~~ 160 (378)
+.||+. ..|++++++ +|++...+.| .++.+++.+.|+.+.
T Consensus 109 ~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 109 NKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp HHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 788883 379999998 8988777654 467888888887654
No 254
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.87 E-value=8e-09 Score=88.61 Aligned_cols=88 Identities=8% Similarity=0.033 Sum_probs=70.0
Q ss_pred CC-cEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcCc-----------------------------HHHH
Q 017071 73 NR-NVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------------------------KDLA 120 (378)
Q Consensus 73 ~~-~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-----------------------------~~~~ 120 (378)
++ +++|.|| |+||+.|..++|.+.++++++++ ++.++.|.+|.. .+++
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va 107 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA 107 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH
Confidence 44 8899998 99999999999999999998876 788888877531 2466
Q ss_pred HHcCCC------------CCcEEEEEe-CCeEeeeeeC----CCCHHHHHHHHHHHh
Q 017071 121 KEYNIL------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREKM 160 (378)
Q Consensus 121 ~~~~v~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~~ 160 (378)
+.||+. .+|++++++ +|++...+.| .++.+++.+.|..+.
T Consensus 108 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 108 VKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 778874 579999998 9988777654 357888888887654
No 255
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.82 E-value=2.6e-08 Score=85.50 Aligned_cols=97 Identities=10% Similarity=0.205 Sum_probs=82.1
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEc--CCCCccHHHHHHHh-ccC--CceeEEEEc--------cHHHHhhcCCC--C
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLH--DLEGMESEELAAAS-KLH--SDVNFYQTT--------SADVAEFFHIH--P 227 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~--~~~~~~~~~~~~~a-~~~--~~~~f~~~~--------~~~~~~~~~i~--~ 227 (378)
.+..+ +.+++++.++.+++++|.||+ +||+ ..+.|..+| .+. .++.|+.+. +++++++|+|. .
T Consensus 6 ~v~~L-t~~nF~~~i~~~~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~ 83 (240)
T 2qc7_A 6 GALPL-DTVTFYKVIPKSKFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKES 83 (240)
T ss_dssp TCEEC-CTTHHHHHGGGCSEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGG
T ss_pred CceEC-CHHHHHHHHcCCCCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCC
Confidence 45566 457888888888999999999 9999 888888888 443 568898876 78999999998 7
Q ss_pred CCCCCeEEEeecCC-CCccccCCCCCHHHHHHHHHhcC
Q 017071 228 KSKRPALIFLHLEA-GKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 228 ~~~~P~i~~~~~~~-~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
+||+++|+.+. .....|.|.++.+.|.+||+.+.
T Consensus 84 ---~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 84 ---YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ---CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred ---CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 99999999876 35789999999999999999885
No 256
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.79 E-value=5.9e-08 Score=74.95 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=75.9
Q ss_pred CCcccCCCHHHHHHhhc-cCCeEEEEEEcCCCCcc---HHHHHHHhc------cCCceeEEEE---ccHHHHhhcCCCCC
Q 017071 162 LGTYSITTTDEAERILT-VESKLVLGFLHDLEGME---SEELAAASK------LHSDVNFYQT---TSADVAEFFHIHPK 228 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~-~~~~~~v~f~~~~~~~~---~~~~~~~a~------~~~~~~f~~~---~~~~~~~~~~i~~~ 228 (378)
..+..+ +.+++++.+. .++.++|.|+++||++. .+.|.+++. ..+++.|+.+ .+++++++|++..
T Consensus 15 ~~v~~l-~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~- 92 (127)
T 3h79_A 15 SRVVEL-TDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG- 92 (127)
T ss_dssp CCCEEC-CTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS-
T ss_pred CceEEC-ChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc-
Confidence 456666 4567777774 58899999999999873 445666552 2356788765 5778999999997
Q ss_pred CCCCeEEEeecCCCC-ccccCCCCCHHHHHHHHHhc
Q 017071 229 SKRPALIFLHLEAGK-ATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 229 ~~~P~i~~~~~~~~~-~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|++++|+.+... ...|.|.++.+.|.+||+++
T Consensus 93 --~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 --FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp --SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred --CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999987543 37899999999999999875
No 257
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=5.9e-09 Score=81.02 Aligned_cols=87 Identities=16% Similarity=0.147 Sum_probs=58.7
Q ss_pred hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc---H----HHHHHcCCCCCcEEEEEe
Q 017071 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 63 ~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~~~~ 135 (378)
.+.++..+..++ ++ .|+++||++|+...+.++++. +.+..+|++.+ + .+++.+++.++|+++ .
T Consensus 17 ~~~~~~~i~~~~-vv-vf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 17 VNQIQETISDNC-VV-IFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHHHHHHHHSS-EE-EEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHHHHHHcCCc-EE-EEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 345566665443 33 399999999999999998762 44566777654 3 378899999999984 4
Q ss_pred CCeEeeeee---CCCCHHHHHHHHHHH
Q 017071 136 AGVRQFQFF---GERTRDVISAWVREK 159 (378)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~~ 159 (378)
+|+.+..+. +......|.++|...
T Consensus 87 ~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 87 NGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp TTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred CCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 886655432 233444566666554
No 258
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.78 E-value=2.4e-09 Score=81.24 Aligned_cols=63 Identities=10% Similarity=0.056 Sum_probs=47.2
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcH-------HHHHHcCCCCCcEEEEEeCCeEeeee
Q 017071 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFVAGVRQFQF 143 (378)
Q Consensus 76 ~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~~~~~g~~~~~~ 143 (378)
.++.|+++||++|++..+.++++...+. + +..+|+++++ .+.+.+|+.++|++++ +|+.+..+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~igg~ 89 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKRG-A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSIGGY 89 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCTT-S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEEESH
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCcC-c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEEeCc
Confidence 4677999999999999998876432211 1 7778887764 7888999999998744 78665443
No 259
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.76 E-value=5.1e-08 Score=82.44 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=74.7
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecCC-ChhHH-----hhHHHHHHHHHHhcCCcEEEEEeCc----------------
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSK-----KLAPEFAAAAKMLKGEADLVMVDAY---------------- 114 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~w-C~~C~-----~~~p~~~~~~~~~~~~~~~~~vd~~---------------- 114 (378)
.+.+.+++.+...-..+++++|+||+.| |++|. .+++.|.++ + .++.++.|+.|
T Consensus 32 tL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds~~~~~~f~~~~gl~~ 107 (224)
T 3keb_A 32 MLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDSPSSLARARHEHGLPN 107 (224)
T ss_dssp EEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSCHHHHHHHHHHHCCTT
T ss_pred EEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCCHHHHHHHHHHcCCCC
Confidence 4455555554433246899999999999 99999 888888877 4 46788887764
Q ss_pred ------C-cHHHHHHcCCCC---------CcEEEEEe-CCeEeeeee-----CCCCHHHHHHHHHHHh
Q 017071 115 ------L-EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFF-----GERTRDVISAWVREKM 160 (378)
Q Consensus 115 ------~-~~~~~~~~~v~~---------~Pt~~~~~-~g~~~~~~~-----g~~~~~~l~~~i~~~~ 160 (378)
. +..+++.||+.. .|++++++ +|++...+. +..+.+++.+.|....
T Consensus 108 fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 108 IALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp CEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred ceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 2 357889999875 79999998 997776543 3567888888887765
No 260
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.73 E-value=8.3e-09 Score=81.68 Aligned_cols=86 Identities=16% Similarity=0.163 Sum_probs=56.6
Q ss_pred hhcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc---H----HHHHHcCCCCCcEEEEEe
Q 017071 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 63 ~~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~~~~ 135 (378)
.+.++..+..+ .++| |+++||++|+...+.++++. +.+..+|++.+ + .+++.+|+.++|+++ .
T Consensus 39 ~~~~~~~i~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i 108 (146)
T 2ht9_A 39 VNQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 108 (146)
T ss_dssp HHHHHHHHHHC-SEEE-EECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--E
T ss_pred HHHHHHHhcCC-CEEE-EECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--E
Confidence 34566666544 3444 99999999999999998763 44556666654 3 378899999999984 4
Q ss_pred CCeEeeeee---CCCCHHHHHHHHHH
Q 017071 136 AGVRQFQFF---GERTRDVISAWVRE 158 (378)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~ 158 (378)
+|+.+..+. +......|.++|..
T Consensus 109 ~G~~igG~d~l~~l~~~g~L~~~L~~ 134 (146)
T 2ht9_A 109 NGTFIGGATDTHRLHKEGKLLPLVHQ 134 (146)
T ss_dssp TTEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEeCchHHHHHHHcChHHHHHHH
Confidence 886554332 22233345555544
No 261
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.72 E-value=6.7e-08 Score=83.30 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=79.2
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEE--cCCCCccHHHHHHHh-cc---CCceeEEEE---c-----cHHHHhhcCCC-
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFL--HDLEGMESEELAAAS-KL---HSDVNFYQT---T-----SADVAEFFHIH- 226 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~--~~~~~~~~~~~~~~a-~~---~~~~~f~~~---~-----~~~~~~~~~i~- 226 (378)
..+..+ +.+++++.+..+..++|.|| ++||+ ..+.|.++| .+ ..++.|+.+ . +++++++|+|.
T Consensus 16 ~~v~~L-t~~nF~~vi~~~~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~ 93 (248)
T 2c0g_A 16 TGCVDL-DELSFEKTVERFPYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 93 (248)
T ss_dssp TTCEEC-CTTTHHHHHTTSSEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCT
T ss_pred CCcEEC-CHHHHHHHHhcCCCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCc
Confidence 345566 45777778888889999999 99999 888888877 44 357888865 3 67899999998
Q ss_pred -CCCCCCeEEEeecCC-CCcccc--CCCCCHHHHHHHHHhcC
Q 017071 227 -PKSKRPALIFLHLEA-GKATPF--RHQFTRLAIANFVTHTK 264 (378)
Q Consensus 227 -~~~~~P~i~~~~~~~-~~~~~y--~g~~~~~~l~~fi~~~~ 264 (378)
. +||+++|+ +. .....| .|.++.+.|.+||+.+.
T Consensus 94 ~~---~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 94 KN---FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp TS---CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CC---CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 7 99999999 75 346788 89999999999999875
No 262
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.65 E-value=1.4e-07 Score=78.55 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=37.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~ 113 (378)
.+++++|.||+.||++|+.+.|.+.++.+++.+++.|..+++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 468899999999999999999999999999887788877765
No 263
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.63 E-value=2e-07 Score=72.38 Aligned_cols=104 Identities=10% Similarity=0.025 Sum_probs=80.6
Q ss_pred HHHHhcCCcccCCCHHHHHHhhccCCeEEEEEEcCC--CCc---cHHHHHHHh-ccCCc-eeEEEE---ccHHHHhhcCC
Q 017071 156 VREKMTLGTYSITTTDEAERILTVESKLVLGFLHDL--EGM---ESEELAAAS-KLHSD-VNFYQT---TSADVAEFFHI 225 (378)
Q Consensus 156 i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~--~~~---~~~~~~~~a-~~~~~-~~f~~~---~~~~~~~~~~i 225 (378)
++++.......+ +.+++++.+.++.+++|.|+.+| |++ ....+.+++ ++.++ ++|+.+ .+++++.+|+|
T Consensus 11 ~~rl~~~g~~~~-t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV 89 (140)
T 2qgv_A 11 WQRMLARGWTPV-SESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGA 89 (140)
T ss_dssp HHHHHHTTCEEC-CHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTC
T ss_pred HHHHHhcCCccC-CHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCC
Confidence 344443455566 56888888877778888898988 655 567788888 56678 999976 57889999999
Q ss_pred CCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
.. +||+++|+++. ......|..+.+.|.+||+...
T Consensus 90 ~s---IPTlilFk~G~-~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 90 FR---FPATLVFTGGN-YRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp CS---SSEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred cc---CCEEEEEECCE-EEEEEecCCCHHHHHHHHHHHh
Confidence 97 99999999875 4456678888899999998653
No 264
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.62 E-value=4.1e-08 Score=73.06 Aligned_cols=95 Identities=7% Similarity=0.043 Sum_probs=62.0
Q ss_pred ccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEee
Q 017071 165 YSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLH 238 (378)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~ 238 (378)
.++++.+++++.++++++++|.|+++||++. .+.+.+++...+++.|+.+ .+++++++|++.. +|++++|+
T Consensus 3 ~~i~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~ 79 (105)
T 4euy_A 3 NTFKTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFT---GPTVLLFY 79 (105)
T ss_dssp -------CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------CC---CCEEEEEE
T ss_pred cccCCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCC---CCEEEEEe
Confidence 4566777788888888999999999999874 4556666644467777754 5778999999986 99999998
Q ss_pred cCCCCccccCCCCCHHHHHHHHHhc
Q 017071 239 LEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 239 ~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++. ....+.|..+.++|.+||++.
T Consensus 80 ~G~-~~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGK-EILRESRFISLENLERTIQLF 103 (105)
T ss_dssp TTE-EEEEEESSCCHHHHHHHHHTT
T ss_pred CCe-EEEEEeCCcCHHHHHHHHHHh
Confidence 553 445678989999999999864
No 265
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.62 E-value=3.1e-07 Score=69.68 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=75.7
Q ss_pred CCcccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 162 LGTYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
++.....+.+++++.++ .+++++|.|+++||.+. .+.+.+++....++.|..+ .+++++++|++.. +|+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt 87 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKS---MPT 87 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCS---SSE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCcc---ccE
Confidence 44556678899999998 68899999999999874 4456666654455777765 5778999999987 999
Q ss_pred EEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 234 i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++|+.+ .....+.|. +.+.|.+||++.
T Consensus 88 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 88 FQFFKKG-QKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEESSS-SEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEeCC-eEEEEEcCC-CHHHHHHHHHHh
Confidence 9999655 355567888 999999999764
No 266
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.61 E-value=1.7e-07 Score=73.79 Aligned_cols=97 Identities=10% Similarity=0.159 Sum_probs=76.6
Q ss_pred cccCCCHHHHHHhhc--cCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
+..+.+.+++++.+. ++.+++|.|+++||++ ..+.+.++| ++.+++.|+.+ ..++++.+|+|.. .||+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~s---iPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYD---PVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCS---SEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCC---CCEE
Confidence 678899999987763 5789999999999998 456778877 56667888875 5788999999997 9999
Q ss_pred EEeecCCCCc-c-------ccCCCCC-HHHHHHHHHhc
Q 017071 235 IFLHLEAGKA-T-------PFRHQFT-RLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~-~-------~y~g~~~-~~~l~~fi~~~ 263 (378)
++|+++..-. . ...|..+ .++|.++|+..
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 9999874211 1 5677776 88899998764
No 267
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.59 E-value=5.8e-07 Score=69.49 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=75.4
Q ss_pred CcccCCCHHHHHH-hhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAER-ILTVESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~-~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
.+..++. +++++ ..+.+++++|.|+++||.+ ..+.+.+++ .+.+.+.|+.+ .+.+++++|++.. +|++
T Consensus 18 ~v~~l~~-~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~ 93 (130)
T 2dml_A 18 DVIELTP-SNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQG---FPTI 93 (130)
T ss_dssp SSEECCT-TTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCS---SSEE
T ss_pred CcEECCH-HHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCc---cCEE
Confidence 4566644 56666 4466789999999999987 456677766 45556777765 4678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+......|.|..+.++|.+|+.+.
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSA 122 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHH
Confidence 99998765477889999999999999864
No 268
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1.8e-07 Score=78.48 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=70.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
+++++++.|| +.||+.|..+.+.|.+...+++. ++.++.|.+|. +.++++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak 130 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSR 130 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHH
Confidence 6899999999 99999999999999999999877 78888888753 356899
Q ss_pred HcCCC------CCcEEEEEe-CCeEeee--ee--CCCCHHHHHHHHHHH
Q 017071 122 EYNIL------AYPTLYLFV-AGVRQFQ--FF--GERTRDVISAWVREK 159 (378)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~--~~--g~~~~~~l~~~i~~~ 159 (378)
+||+- ..+++++++ +|++... +. -.++.+++.+.|+.+
T Consensus 131 ~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 131 DYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 99983 368899999 8865432 22 357889988887654
No 269
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.58 E-value=4.1e-07 Score=68.08 Aligned_cols=96 Identities=8% Similarity=0.155 Sum_probs=75.2
Q ss_pred CcccCCCHHHHHHhh-ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
++..+ +.+++++.+ +.+++++|.|+++||++. .+.+.+++ .+.+++.|+.+ .+++++++|++.. +|++
T Consensus 5 ~v~~l-~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~ 80 (111)
T 3gnj_A 5 SLEKL-DTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKG---VPQI 80 (111)
T ss_dssp CSEEC-CHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCS---SCEE
T ss_pred cceec-CHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCc---CCEE
Confidence 45566 678888888 678899999999999874 44566666 44456888765 5778999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+. ....+.|..+.+.|.+||++.
T Consensus 81 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 81 LYFKDGE-YKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp EEEETTE-EEEEEESSCCHHHHHHHHHHH
T ss_pred EEEECCE-EEEEEeccCCHHHHHHHHHHH
Confidence 9997653 455788999999999999864
No 270
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.57 E-value=1.4e-07 Score=78.75 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=65.2
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------------------------------------- 114 (378)
.++++++.||.+||++|+.+.|.+.++.+++++++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~~ 100 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKI 100 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999998776766655531
Q ss_pred -------------------C------------------cHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHH
Q 017071 115 -------------------L------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 115 -------------------~------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (378)
. +..+++++||.|+||+++ +|+.. ..|..+.+.|.+.|.
T Consensus 101 ~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi--ng~~~--~~g~~~~~~l~~~i~ 176 (195)
T 2znm_A 101 RLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV--GGKYR--VIFNNGFDGGVHTIK 176 (195)
T ss_dssp CTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE--TTTEE--ECCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEE--CCEEE--EcCCCCHHHHHHHHH
Confidence 0 113456789999999544 67432 457788888888888
Q ss_pred HHh
Q 017071 158 EKM 160 (378)
Q Consensus 158 ~~~ 160 (378)
+.+
T Consensus 177 ~~l 179 (195)
T 2znm_A 177 ELV 179 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 271
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.56 E-value=2.6e-07 Score=71.41 Aligned_cols=94 Identities=10% Similarity=0.017 Sum_probs=74.6
Q ss_pred ccCCCHHHHHHhhccCC-eEEEEEEcCCC--Cc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 165 YSITTTDEAERILTVES-KLVLGFLHDLE--GM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 165 ~~i~~~~~~~~~~~~~~-~~~v~f~~~~~--~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
..++ .+++++.+...+ +++|.|+++|| ++ ....+.+++ ++.+++.|+.+ .+++++.+|+|.. .||+
T Consensus 18 ~~vt-~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~s---iPTl 93 (137)
T 2qsi_A 18 TLVD-EATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAV---CPSL 93 (137)
T ss_dssp EEEC-TTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCS---SSEE
T ss_pred cccC-HhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCcc---CCEE
Confidence 3554 477777776655 89999999999 66 456777877 66688999876 5678999999997 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+++. ......|-.+.+.|.+||+.+
T Consensus 94 ilFkdG~-~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 94 AVVQPER-TLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp EEEECCE-EEEEEESCCCHHHHHHHHHHH
T ss_pred EEEECCE-EEEEEeCCCCHHHHHHHHHHH
Confidence 9999874 455667888889999999865
No 272
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.56 E-value=3.3e-07 Score=67.89 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=74.6
Q ss_pred cccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+..+++.+++++.++ .+++++|.|+++||++. .+.+.+++....++.|..+ .+++++++|++.. +|+++
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~ 78 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKS---MPTFQ 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCB---SSEEE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCc---CcEEE
Confidence 456888999999998 67899999999999874 4456666644455777765 5678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|+.+. ....+.|. +.++|.+||++.
T Consensus 79 ~~~~g~-~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 79 FFKKGQ-KVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred EEECCe-EEEEEeCC-CHHHHHHHHHHh
Confidence 997653 45567888 999999999764
No 273
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.54 E-value=5.5e-08 Score=74.08 Aligned_cols=71 Identities=11% Similarity=0.228 Sum_probs=51.3
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhh-HHHHHHHHHHhcCCcEEEEEeCcCcH-------HHHHHcCCCCCcEEEEEe
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFV 135 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~~~~ 135 (378)
+.+++.+...+ ++.|+++||++|++. .+.+++... ..+.+..+|++.++ .+.+.+|+.++|++ |.
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi 88 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YI 88 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 34555654443 556999999999999 887766431 13778888888764 58889999999987 45
Q ss_pred CCeEee
Q 017071 136 AGVRQF 141 (378)
Q Consensus 136 ~g~~~~ 141 (378)
+|+.+.
T Consensus 89 ~g~~ig 94 (118)
T 3c1r_A 89 NGKHIG 94 (118)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 886543
No 274
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.53 E-value=4.4e-07 Score=78.57 Aligned_cols=177 Identities=12% Similarity=0.091 Sum_probs=107.2
Q ss_pred CCcccCCCHHHHHHhh-ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCC---ceeEEEEc-----cHHHHhhcCCCCC
Q 017071 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPK 228 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~---~~~f~~~~-----~~~~~~~~~i~~~ 228 (378)
.++..+++ +++++.+ +.+++++|.|+++||++. .+.+.+++ .+.+ .+.|+.+. +.+++++|++..
T Consensus 12 ~~v~~l~~-~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~- 89 (244)
T 3q6o_A 12 DPLTLLQA-DTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG- 89 (244)
T ss_dssp SSSEEECT-TTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS-
T ss_pred CCceeCCh-hhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc-
Confidence 45666654 5555544 556899999999999974 45566666 3433 67887653 578999999987
Q ss_pred CCCCeEEEeecCCC----CccccCCCCCHHHHHHHHHhc----C------CCceEEecccchhhhhccch--H-HH----
Q 017071 229 SKRPALIFLHLEAG----KATPFRHQFTRLAIANFVTHT----K------HPLVVTLTIHNAQFVFQDPR--K-QL---- 287 (378)
Q Consensus 229 ~~~P~i~~~~~~~~----~~~~y~g~~~~~~l~~fi~~~----~------~P~~~~l~~~~~~~~~~~~~--~-~l---- 287 (378)
+|++++|+.+.. ....+.| .+.+.|.+||.+. . .|.+...+.+++..++.... . .+
T Consensus 90 --~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~ 166 (244)
T 3q6o_A 90 --FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEX 166 (244)
T ss_dssp --SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEEC
T ss_pred --cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEE
Confidence 999999997432 3335666 5888888887753 2 12233334444444332211 0 00
Q ss_pred ------HHHhhhcCc---------chhhhhhHhhcCCCCCCCcEEEEEcCCCccccCCC-CCCHHHHHHHHHHH
Q 017071 288 ------LHVYVEMNS---------EGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNG-ELTLSSIKSFGEEF 345 (378)
Q Consensus 288 ------~f~~~d~~~---------~~~~~~l~~~~gi~~~~~p~i~i~~~~~~~y~~~~-~~~~~~i~~Fi~~~ 345 (378)
.-...|... ..-...+++.||++. .|.+++++.+++...++. .-+.+.+..+++.+
T Consensus 167 ~~~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~--~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 167 GGSYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD--FPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC--SSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCcchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC--CCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 111111100 010246789999975 699999988666555543 44555666666554
No 275
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.53 E-value=3.9e-07 Score=68.41 Aligned_cols=97 Identities=18% Similarity=0.147 Sum_probs=75.3
Q ss_pred CCcccCCCHHHHHHhhcc----CCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~ 230 (378)
..+..+++.+++++.+.. +++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+.+++++|++..
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~--- 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITA--- 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCB---
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCc---
Confidence 456788888999988876 7899999999999874 34566666 44447888765 4678999999986
Q ss_pred CCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 231 ~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|++++++.+. ....+.|. +.++|.+||++.
T Consensus 79 ~Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 79 MPTFHVYKDGV-KADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp SSEEEEEETTE-EEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEECCe-EEEEEcCC-CHHHHHHHHHHH
Confidence 99999997553 44467787 889999999864
No 276
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.53 E-value=2.5e-07 Score=67.00 Aligned_cols=69 Identities=9% Similarity=0.095 Sum_probs=52.1
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-----Cc----HHHHHHcCCCCCcEEEEEeCCeEeeeeeCCC
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LE----KDLAKEYNILAYPTLYLFVAGVRQFQFFGER 147 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-----~~----~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~ 147 (378)
++.|+++||++|++..+.++++. +.+-.+|++ +. .++.+.+++.++|++++ +|+. .|..
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~----i~G~ 81 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH----VLGY 81 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE----EESC
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE----EeCC
Confidence 66799999999999999888763 334455655 33 56778899999999877 7743 3445
Q ss_pred CHHHHHHHHH
Q 017071 148 TRDVISAWVR 157 (378)
Q Consensus 148 ~~~~l~~~i~ 157 (378)
+.+.|.++|.
T Consensus 82 ~~~~l~~~l~ 91 (92)
T 3ic4_A 82 NEEKLKELIR 91 (92)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHhc
Confidence 8999998875
No 277
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.52 E-value=5.6e-07 Score=67.99 Aligned_cols=96 Identities=17% Similarity=0.179 Sum_probs=75.1
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+.+..+++.+++++.++.+++++|.|+++||.+ ..+.+.+++....++.|..+ .+.+++++|++.. +|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTA---MPTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---BSEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCc---ccEEE
Confidence 456788899999999999999999999999987 34556666643344777765 4678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+++.+. ....+.|.. .+.|.+||++
T Consensus 89 ~~~~G~-~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQ-LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTE-EEEEEESSC-HHHHHHHHHT
T ss_pred EEeCCe-EEEEEeCCC-HHHHHHHHHh
Confidence 997553 444677877 8999999975
No 278
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.52 E-value=1.9e-07 Score=75.85 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=79.9
Q ss_pred hcCCcccCCCHHHHHHhhcc--CCeEEEEEEc-------CCCCc---cHHHHHHHh-ccC-----CceeEEEE---ccHH
Q 017071 160 MTLGTYSITTTDEAERILTV--ESKLVLGFLH-------DLEGM---ESEELAAAS-KLH-----SDVNFYQT---TSAD 218 (378)
Q Consensus 160 ~~~~~~~i~~~~~~~~~~~~--~~~~~v~f~~-------~~~~~---~~~~~~~~a-~~~-----~~~~f~~~---~~~~ 218 (378)
....+.+++ .+++++++.. +..++|.|++ .||++ ..+.|.++| .+. +++.|+.+ .+++
T Consensus 16 ~~~~vi~lt-~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~ 94 (178)
T 3ga4_A 16 DDTGVITVT-ADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ 94 (178)
T ss_dssp CTTSEEECC-TTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH
T ss_pred ccCCCEECC-HHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH
Confidence 345677774 5777787754 4468888888 49987 355677777 444 67888876 6789
Q ss_pred HHhhcCCCCCCCCCeEEEeecCCCCc-----------ccc---CC-CCCHHHHHHHHHhcCCCceEEecccch
Q 017071 219 VAEFFHIHPKSKRPALIFLHLEAGKA-----------TPF---RH-QFTRLAIANFVTHTKHPLVVTLTIHNA 276 (378)
Q Consensus 219 ~~~~~~i~~~~~~P~i~~~~~~~~~~-----------~~y---~g-~~~~~~l~~fi~~~~~P~~~~l~~~~~ 276 (378)
++++|+|.+ +|++++|+++.... ..| .| .++.+.|.+||.+..-+.+.-..+.|+
T Consensus 95 la~~~~I~s---iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny 164 (178)
T 3ga4_A 95 LVKDLKLQN---VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNV 164 (178)
T ss_dssp HHHHTTCCS---SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC-
T ss_pred HHHHcCCCC---CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCCh
Confidence 999999997 99999999875333 344 24 688999999998865444433333333
No 279
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.51 E-value=4.2e-07 Score=67.70 Aligned_cols=96 Identities=11% Similarity=0.169 Sum_probs=72.8
Q ss_pred CcccCCCHHHHHHhh--ccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAERIL--TVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~--~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
++..+.+.+++++.+ ..+++++|.|+++||++. .+.+.++++..+++.|..+ .+++++++|++.. +|++
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~ 78 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISA---TPTF 78 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCS---SSEE
T ss_pred ceEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCc---ccEE
Confidence 356778888999888 467899999999999874 4456666644467888765 4678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+. ....+.|. +.++|.+||++.
T Consensus 79 ~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 79 QFFRNKV-RIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp EEEETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred EEEECCe-EEEEEeCC-CHHHHHHHHHHh
Confidence 9997653 44467784 556699999763
No 280
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.51 E-value=6.3e-07 Score=73.32 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=61.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHh--cCCcEEEEEeCcC----------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYL---------------------------------- 115 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~--~~~~~~~~vd~~~---------------------------------- 115 (378)
.++++++.|+..||++|+.+.|.+.++.+++ .+++.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 4577899999999999999999999998888 5556655544310
Q ss_pred --------------------------------cHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHH
Q 017071 116 --------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (378)
Q Consensus 116 --------------------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (378)
+..+++++||.|+||+++ +|+ .+.|..+.+.|.+.|.
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEY---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTE---EECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCE---EccCCCCHHHHHHHhc
Confidence 112456789999999655 785 4579899999888774
No 281
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.51 E-value=1.8e-07 Score=73.94 Aligned_cols=81 Identities=16% Similarity=0.237 Sum_probs=62.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC--------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~-------------------------------------- 113 (378)
.++.+++.|..++|++|+++.+.++++ + ++.+...+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 568899999999999999999998654 2 344433221
Q ss_pred --------cCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 114 --------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 114 --------~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+++.++++++||+|+||+++ .+|+ .+.|..+.+.|.++|.+...
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHHHH
Confidence 12356788999999999988 7785 47799999999999987653
No 282
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.51 E-value=5.5e-07 Score=69.27 Aligned_cols=95 Identities=8% Similarity=0.056 Sum_probs=74.8
Q ss_pred cccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEe
Q 017071 164 TYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~ 237 (378)
+..+++.+++++.+..+++++|.|+++||.+ ..+.+.+++....++.|+.+ .+.+++++|++.. +|++++|
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~i~ 97 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQ---LPTFIIA 97 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSEEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCc---ccEEEEE
Confidence 6678888999999988889999999999987 44556666644466888765 4678999999986 9999999
Q ss_pred ecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.+. ....+.| .+.++|.+||+..
T Consensus 98 ~~G~-~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 98 RSGK-MLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred eCCe-EEEEEeC-CCHHHHHHHHHHH
Confidence 7653 4446778 6889999999763
No 283
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.51 E-value=6.1e-07 Score=67.08 Aligned_cols=96 Identities=13% Similarity=0.175 Sum_probs=73.2
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhcc-C---CceeEEEE---ccHHHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKL-H---SDVNFYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~-~---~~~~f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
..+..+ +.+++++.+. +++++|.|+++||.+. .+.+..+++. . ..+.|+.+ .+++++++|++.. +
T Consensus 5 ~~v~~l-~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~ 79 (111)
T 3uvt_A 5 STVLAL-TENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRG---Y 79 (111)
T ss_dssp CCSEEC-CTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCS---S
T ss_pred CcceEc-ChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCc---c
Confidence 445566 5577777777 7789999999999874 4456666633 2 35777654 5678999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++++|+++. ....+.|..+.+.|.+||+++
T Consensus 80 Pt~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 PTLLLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp SEEEEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred cEEEEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 9999997653 556788999999999999875
No 284
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.51 E-value=2e-07 Score=77.41 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=35.1
Q ss_pred CCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeC
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA 113 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~ 113 (378)
.++++|.||+.||++|+.+.|.+ .++.+.+.+++.|..++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEec
Confidence 47899999999999999999987 688888877777777765
No 285
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.50 E-value=5e-07 Score=67.96 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=74.0
Q ss_pred cccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEE
Q 017071 164 TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
+..++ .+++++.+ .+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+.+++++|++.. +|++++
T Consensus 3 v~~l~-~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~ 77 (112)
T 2voc_A 3 IVKAT-DQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMS---IPTLLV 77 (112)
T ss_dssp CEECC-TTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCS---BSEEEE
T ss_pred eEEec-HHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCc---ccEEEE
Confidence 34554 46677777 78899999999999873 45566666 45567888765 4678999999986 999999
Q ss_pred eecCCCCccccCCCCCHHHHHHHHHhcCCC
Q 017071 237 LHLEAGKATPFRHQFTRLAIANFVTHTKHP 266 (378)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P 266 (378)
|+.+ .....+.|..+.++|.+|+..+.-|
T Consensus 78 ~~~G-~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 78 LKDG-EVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EeCC-EEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9654 3455688999999999999987654
No 286
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.50 E-value=2.9e-07 Score=76.12 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=65.5
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc--------------------C-----------------
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--------------------L----------------- 115 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~--------------------~----------------- 115 (378)
+++++|.|+..||+||+++.|.+.++.+.+ ++.|..+... .
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~ 99 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMG 99 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Confidence 688999999999999999999999999988 3444444321 0
Q ss_pred -----------------------------------------cHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHH
Q 017071 116 -----------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (378)
Q Consensus 116 -----------------------------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (378)
+...++++||+|+||+++ +|+......|..+.+.+.+
T Consensus 100 ~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~ 177 (185)
T 3feu_A 100 EGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIAD 177 (185)
T ss_dssp TTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHH
Confidence 001345678999999987 8866667789999999999
Q ss_pred HHHHHh
Q 017071 155 WVREKM 160 (378)
Q Consensus 155 ~i~~~~ 160 (378)
.|..++
T Consensus 178 ~i~~ll 183 (185)
T 3feu_A 178 TIRYLL 183 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 287
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.49 E-value=8.5e-07 Score=66.33 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=74.1
Q ss_pred cccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEe
Q 017071 164 TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~ 237 (378)
.....+.+++++.++.+++++|.|+++||.+. .+.+.+++....++.|..+ .+.+++++|++.. +|++++|
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~ 84 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSA---MPTLLLF 84 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSEEEEE
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCc---cCEEEEE
Confidence 34456889999999999999999999999874 4455666654456777754 5678999999997 9999999
Q ss_pred ecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.+ .....+.|. +.++|.+||+++
T Consensus 85 ~~G-~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNG-KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred ECC-EEEEEEeCC-CHHHHHHHHHhh
Confidence 854 355567787 779999999864
No 288
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.49 E-value=7.6e-07 Score=73.30 Aligned_cols=87 Identities=13% Similarity=0.122 Sum_probs=68.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-------------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------------------------------------- 114 (378)
.+++++|.|+.-.||+|+++.|.+.++.+++.+++.+..+...
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999998876666654321
Q ss_pred --------------------------------------CcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHH
Q 017071 115 --------------------------------------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (378)
Q Consensus 115 --------------------------------------~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (378)
.+...++++||+|+||+++ ||+.+....|..+.+++.+.|
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLV 177 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHH
Confidence 0123567899999999876 887666666788899998888
Q ss_pred HHHh
Q 017071 157 REKM 160 (378)
Q Consensus 157 ~~~~ 160 (378)
..++
T Consensus 178 ~~Ll 181 (184)
T 4dvc_A 178 NYLL 181 (184)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7665
No 289
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.49 E-value=9.6e-07 Score=65.37 Aligned_cols=95 Identities=20% Similarity=0.321 Sum_probs=73.3
Q ss_pred cccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
+.++++.+++++.++ .++++++.|+++||.+. .+.+.+++ .+..++.|..+ .+.+++++|++.. +|++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISS---MPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCc---ccEE
Confidence 456778788888887 67899999999999874 34566666 44467887765 5678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++++.+. ....+.| .+.++|.+||++.
T Consensus 79 ~~~~~G~-~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 79 VFLKNGV-KVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEETTE-EEEEEES-CCHHHHHHHHHHT
T ss_pred EEEcCCc-EEEEEcC-CCHHHHHHHHHHh
Confidence 9997653 4456778 6889999999764
No 290
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.49 E-value=7.5e-07 Score=65.72 Aligned_cols=94 Identities=15% Similarity=0.293 Sum_probs=72.2
Q ss_pred ccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEE
Q 017071 165 YSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 165 ~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
.++++.+++++.+. .+++++|.|+++||.+. .+.+.+++....++.|+.+ .+++++++|++.. .|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTA---MPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCcc---ccEEEE
Confidence 56778889998887 57889999999999874 4455666644447777765 4678999999986 999999
Q ss_pred eecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 237 LHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++.+. ....+.| .+.++|.+||++.
T Consensus 79 ~~~g~-~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 79 IKDGK-EVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred EeCCc-EEEEEeC-CCHHHHHHHHHhh
Confidence 98553 4456678 6889999999764
No 291
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.48 E-value=5.6e-07 Score=66.99 Aligned_cols=96 Identities=7% Similarity=0.083 Sum_probs=75.2
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
.+..+ +.+++++.+.++++++|.|+++||.+. .+.+..++ .+.+++.|..+ .+++++++|++.. +|+++
T Consensus 5 ~v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~---~Pt~~ 80 (109)
T 3tco_A 5 VTLVL-TEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLN---IPTTL 80 (109)
T ss_dssp CCEEC-CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCS---SSEEE
T ss_pred eEEEe-cHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCccc---CCEEE
Confidence 44455 568888888889999999999999874 44556666 45557877765 5778999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|+.+ .....+.|..+.++|.+||++.
T Consensus 81 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 81 IFVNG-QLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEcCC-cEEEeeeccCCHHHHHHHHHHH
Confidence 99654 3556688999999999999864
No 292
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.48 E-value=4.8e-07 Score=81.42 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=75.9
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc--------------------
Q 017071 56 KDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-------------------- 114 (378)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-------------------- 114 (378)
..+.+.+++.+...-.+||+++|+|| +.||+.|..+++.|.+. ...++.++.|+.|
T Consensus 7 F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~---~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~ 83 (322)
T 4eo3_A 7 FELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE---NFEKAQVVGISRDSVEALKRFKEKNDLKVTLLS 83 (322)
T ss_dssp CEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS---CCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEE
T ss_pred cEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH---hhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEE
Confidence 34555566655544457899999999 67999999998888642 2236888888764
Q ss_pred -CcHHHHHHcCCC----CCcEEEEEe-CCeEeeeeeCC---CCHHHHHHHHHHHh
Q 017071 115 -LEKDLAKEYNIL----AYPTLYLFV-AGVRQFQFFGE---RTRDVISAWVREKM 160 (378)
Q Consensus 115 -~~~~~~~~~~v~----~~Pt~~~~~-~g~~~~~~~g~---~~~~~l~~~i~~~~ 160 (378)
.+.++++.|||. .+|++++++ +|++...|.+. ...+++.+++++..
T Consensus 84 D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 84 DPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp CTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred cCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 345789999994 478999998 99887777764 45788888888776
No 293
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.48 E-value=5.8e-07 Score=71.79 Aligned_cols=99 Identities=18% Similarity=0.241 Sum_probs=76.5
Q ss_pred cCCcccCCCHHHHHHhhcc--CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCC
Q 017071 161 TLGTYSITTTDEAERILTV--ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~--~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P 232 (378)
...+..+++.+++++.++. +++++|.|+++||.+. .+.+.+++....++.|..+ .+++++++|++.. +|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISS---VP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCS---SS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCC---CC
Confidence 3567788888999999987 8899999999999874 3456666644567888765 4678999999986 99
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
++++|+.+ .....+.| .+.++|.+||++..
T Consensus 88 t~~~~~~G-~~~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 88 TFLFFKNS-QKIDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp EEEEEETT-EEEEEEES-SCHHHHHHHHHHHS
T ss_pred EEEEEECC-EEEEEEeC-CCHHHHHHHHHHHh
Confidence 99999944 23445667 47788999998754
No 294
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.46 E-value=1e-06 Score=67.26 Aligned_cols=97 Identities=16% Similarity=0.231 Sum_probs=75.2
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccC-Cc-eeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLH-SD-VNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~-~~-~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
..+..|++.+++++.++.+++++|.|+++||.+. .+.+.+++... ++ +.|+.+ .+.+++++|++.. +|+
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~---~Pt 91 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA---MPT 91 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCS---SSE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCc---ccE
Confidence 4577889999999999888899999999999974 34455555433 22 777655 4678999999986 999
Q ss_pred EEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 234 i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++|+.+ .....+.|. +.++|.+||++.
T Consensus 92 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 92 FVFFKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EEEEETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9999754 244567787 889999999864
No 295
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.46 E-value=9.7e-07 Score=66.31 Aligned_cols=97 Identities=13% Similarity=0.171 Sum_probs=74.6
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
++.....+.+++++.++.+++++|.|+++||.+. .+.+.+++....++.|..+ .+++++++|++.. +|+++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~Pt~~ 84 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITS---MPTFK 84 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCS---SSEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCc---ccEEE
Confidence 4455566889999999989999999999999874 4455566644446777765 4678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++.+. ....+.|. +.++|.+||+..
T Consensus 85 ~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYKNGS-SVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEETTE-EEEEEESC-CHHHHHHHHHTT
T ss_pred EEECCc-EEEEEeCC-CHHHHHHHHHHh
Confidence 997553 44567788 899999999864
No 296
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.46 E-value=4.6e-07 Score=67.38 Aligned_cols=68 Identities=24% Similarity=0.346 Sum_probs=50.4
Q ss_pred hcHHHHhcCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHH----HHHHcCCCCCcEEEEE
Q 017071 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLF 134 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~ 134 (378)
+.+++.+..++ ++| |++ +||++|++..+.+.+. ++.|..+|+++++. +.+.+|+.++|+++
T Consensus 8 ~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~-- 77 (105)
T 2yan_A 8 ERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKAYSNWPTYPQLY-- 77 (105)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeEE--
Confidence 45666665554 444 776 9999999999999875 46788899988766 45568999999984
Q ss_pred eCCeEee
Q 017071 135 VAGVRQF 141 (378)
Q Consensus 135 ~~g~~~~ 141 (378)
.+|+.+.
T Consensus 78 i~g~~ig 84 (105)
T 2yan_A 78 VKGELVG 84 (105)
T ss_dssp ETTEEEE
T ss_pred ECCEEEe
Confidence 4885443
No 297
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.46 E-value=4.8e-07 Score=70.95 Aligned_cols=100 Identities=15% Similarity=0.231 Sum_probs=77.0
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCC---ceeEEEE---ccHHHHhhcCCCCCCCCC
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAAS-KLHS---DVNFYQT---TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~---~~~f~~~---~~~~~~~~~~i~~~~~~P 232 (378)
.+..+ +.+++++.+..++.++|.|+++||.+ ..+.+.+++ .+.+ ++.|+.+ .+.+++++|++.. +|
T Consensus 18 ~v~~l-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~P 93 (140)
T 2dj1_A 18 GVWVL-NDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG---YP 93 (140)
T ss_dssp TEEEC-CTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCS---SS
T ss_pred CCEEc-ChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCc---cC
Confidence 45566 56788888888899999999999986 345566555 3333 3777765 4678999999986 99
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHhcCCCce
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLV 268 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P~~ 268 (378)
++++|+.+ +...|.|..+.+.|.+||+...-+..
T Consensus 94 t~~~~~~G--~~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 94 TIKILKKG--QAVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp EEEEEETT--EEEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred eEEEEECC--cEEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 99999765 37788999999999999998754444
No 298
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.46 E-value=1e-06 Score=66.73 Aligned_cols=100 Identities=17% Similarity=0.274 Sum_probs=75.5
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccC---CceeEEEE---ccHHHHhhcCCCCCCCCC
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAAS-KLH---SDVNFYQT---TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~---~~~~f~~~---~~~~~~~~~~i~~~~~~P 232 (378)
.+..+ +.+++++.++.++.++|.|+++||.+ ..+.+.+++ .+. .++.|..+ .+.+++++|++.. +|
T Consensus 8 ~v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~P 83 (120)
T 1mek_A 8 HVLVL-RKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG---YP 83 (120)
T ss_dssp TEEEC-CTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS---SS
T ss_pred CcEEe-chhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc---cc
Confidence 34555 45777788888899999999999986 456666666 333 35666655 4567999999986 99
Q ss_pred eEEEeecCCC-CccccCCCCCHHHHHHHHHhcCCC
Q 017071 233 ALIFLHLEAG-KATPFRHQFTRLAIANFVTHTKHP 266 (378)
Q Consensus 233 ~i~~~~~~~~-~~~~y~g~~~~~~l~~fi~~~~~P 266 (378)
++++|+++.. ....|.|..+.+.|.+||++..-|
T Consensus 84 t~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 84 TIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred EEEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 9999976542 236888999999999999987644
No 299
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.45 E-value=2.2e-07 Score=66.88 Aligned_cols=56 Identities=11% Similarity=0.325 Sum_probs=45.7
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc--CcHHHHHHc-CCCCCcEEEEEeCCeE
Q 017071 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEY-NILAYPTLYLFVAGVR 139 (378)
Q Consensus 76 ~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~-~v~~~Pt~~~~~~g~~ 139 (378)
.++.|+++||++|+...+.+++. ++.+..+|++ ...++.+.+ ++.++|+++ .+|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 36779999999999999988875 4667888888 556788889 999999984 37854
No 300
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.45 E-value=1e-06 Score=65.37 Aligned_cols=96 Identities=9% Similarity=0.220 Sum_probs=70.8
Q ss_pred CcccCCCHHHHHH-hhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAER-ILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~-~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
.+..++. +++++ ..+.+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|++
T Consensus 3 ~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 78 (107)
T 2i4a_A 3 HTLAVSD-SSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRS---IPTL 78 (107)
T ss_dssp CEEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCS---SSEE
T ss_pred ceeecch-hhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCc---cCEE
Confidence 4556644 55554 44677899999999999874 34455655 45557887765 4678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+ .....+.|..+.+.|.+||++.
T Consensus 79 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDG-KVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCC-EEEEEecCCCCHHHHHHHHHhc
Confidence 999654 3445678999999999999864
No 301
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.45 E-value=7.6e-07 Score=64.11 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=57.4
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHc-----CCCCCcEEEEEeCCeEeeeeeCCCCHHH
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQFQFFGERTRDV 151 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~-----~v~~~Pt~~~~~~g~~~~~~~g~~~~~~ 151 (378)
++.|..+||++|++....|++. ++.|-.+|++++++..+.+ |.+++|+++ +.+|.... ..+.++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l~----~~~~~e 74 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTLT----NPSADE 74 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEEE----SCCHHH
T ss_pred EEEEcCCCCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEEe----CCCHHH
Confidence 6779999999999999887652 6888899999887655433 788999975 46674432 357889
Q ss_pred HHHHHHHHhcC
Q 017071 152 ISAWVREKMTL 162 (378)
Q Consensus 152 l~~~i~~~~~~ 162 (378)
|.++|.+..+-
T Consensus 75 l~~~L~el~gL 85 (92)
T 2lqo_A 75 VKAKLVKIAGL 85 (92)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHhcCC
Confidence 99999888753
No 302
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.44 E-value=1.7e-06 Score=71.90 Aligned_cols=42 Identities=12% Similarity=0.178 Sum_probs=35.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~ 113 (378)
.++++++.||.+||++|..+.|.+.++.+++.+++.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 356789999999999999999999999998877777765543
No 303
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.44 E-value=9.5e-07 Score=65.40 Aligned_cols=95 Identities=9% Similarity=0.121 Sum_probs=73.5
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
++..+ +.+++++.+ .+++++|.|+++||.+. .+.+.+++ .+.+++.|+.+ .+++++++|++.. +|+++
T Consensus 4 ~v~~l-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~ 78 (106)
T 3die_A 4 AIVKV-TDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMS---IPTLI 78 (106)
T ss_dssp CCEEC-CTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---BSEEE
T ss_pred ceEEC-CHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcc---cCEEE
Confidence 45566 557777777 78899999999999874 44566666 45556777765 5778999999987 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++.+ .....+.|..+.++|.+||++.
T Consensus 79 ~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFKDG-QPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred EEeCC-eEEEEEeCCCCHHHHHHHHHHh
Confidence 99854 3455788999999999999864
No 304
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.43 E-value=1.5e-06 Score=65.10 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=71.7
Q ss_pred ccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEee
Q 017071 165 YSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLH 238 (378)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~ 238 (378)
..+.+.+++ +.+..+++++|.|+++||.+. .+.+.+++....++.|..+ .+.+++++|++.. +|++++|+
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~ 80 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFER---VPTLVFIR 80 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCS---SCEEEEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcc---cCEEEEEE
Confidence 344456677 566677889999999999974 4455666654456777754 5678999999986 99999996
Q ss_pred cCCCCccccCCCCCHHHHHHHHHhcCC
Q 017071 239 LEAGKATPFRHQFTRLAIANFVTHTKH 265 (378)
Q Consensus 239 ~~~~~~~~y~g~~~~~~l~~fi~~~~~ 265 (378)
.+ .....+.|..+.++|.+++....-
T Consensus 81 ~G-~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 81 DG-KVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp SS-SEEEEEESCCCHHHHHHHHHTC--
T ss_pred CC-EEEEEEcCCCCHHHHHHHHHHHhh
Confidence 55 355677898899999999988653
No 305
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.43 E-value=1e-06 Score=69.90 Aligned_cols=97 Identities=12% Similarity=0.220 Sum_probs=76.1
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
..+..+ +.+++++.+..+++++|.|+++||.+ ..+.+.+++ .+.+++.|..+ .+.+++++|++.. +|++
T Consensus 38 ~~v~~l-~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~ 113 (148)
T 3p2a_A 38 GEVINA-TAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRS---IPTI 113 (148)
T ss_dssp CCCEEC-CTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred CCceec-CHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCc---cCEE
Confidence 345555 45778888888899999999999987 445666666 55567888765 5778999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+. ....|.|..+.+.|.+||++.
T Consensus 114 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 114 MLYRNGK-MIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp EEEETTE-EEEEESSCCCHHHHHHHHHHH
T ss_pred EEEECCe-EEEEEeCCCCHHHHHHHHHHH
Confidence 9997553 455788999999999999864
No 306
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.42 E-value=1.7e-06 Score=65.01 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=73.2
Q ss_pred hcCCcccCCCHHHHHHh-hccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCC
Q 017071 160 MTLGTYSITTTDEAERI-LTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 160 ~~~~~~~i~~~~~~~~~-~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
++..+..++ .+++++. +..+++++|.|+++||.+. .+.+.+++ .+.+++.|+.+ .+.+++++|++.. +
T Consensus 5 ~~~~v~~l~-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~ 80 (115)
T 1thx_A 5 MSKGVITIT-DAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEG---V 80 (115)
T ss_dssp -CCSEEECC-GGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCS---S
T ss_pred ccCceEEee-ccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCc---e
Confidence 345577774 4666655 4667899999999999874 34556666 45556887765 4678999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++++|+.+ .....+.|..+.++|.+||++.
T Consensus 81 Pt~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 81 PALRLVKGE-QILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEcCC-EEEEEecCCCCHHHHHHHHHHH
Confidence 999999654 3444678988999999999864
No 307
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.42 E-value=8.6e-08 Score=79.99 Aligned_cols=45 Identities=9% Similarity=0.176 Sum_probs=41.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCcCc
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE 116 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~~ 116 (378)
.+++++|.||+.||+||+.+.|.+ +++++.+++++.|..++++.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 367899999999999999999999 999999988999999999865
No 308
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.42 E-value=1e-06 Score=62.11 Aligned_cols=67 Identities=9% Similarity=0.146 Sum_probs=48.8
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcH----HHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHH
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVI 152 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l 152 (378)
++.|+++||++|++..+.+++. ++.+..+|++.++ ++.+.+++.++|+++ .+|+.+. | .+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i~---g---~~~i 68 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHIG---G---YDDL 68 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEEE---S---HHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEEe---C---HHHH
Confidence 5679999999999999988764 4566777777653 356788999999984 4885432 2 3556
Q ss_pred HHHHH
Q 017071 153 SAWVR 157 (378)
Q Consensus 153 ~~~i~ 157 (378)
.++++
T Consensus 69 ~~~~~ 73 (82)
T 1fov_A 69 YALDA 73 (82)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 309
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.42 E-value=2e-06 Score=64.50 Aligned_cols=95 Identities=17% Similarity=0.261 Sum_probs=69.6
Q ss_pred cccCCCHHHHHHhhcc---CCeEEEEEEcCCCCcc---HHHHHHHhcc--CCceeEEEE---ccHHHHhhcCCCCCCCCC
Q 017071 164 TYSITTTDEAERILTV---ESKLVLGFLHDLEGME---SEELAAASKL--HSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~---~~~~~v~f~~~~~~~~---~~~~~~~a~~--~~~~~f~~~---~~~~~~~~~~i~~~~~~P 232 (378)
+..+++.+++++.+.. +++++|.|+++||++. .+.+.+++.. ..++.|..+ .+++++++|++.. +|
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~P 78 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISA---VP 78 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCS---SS
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCc---cc
Confidence 4567788889988876 7899999999999974 4455666633 456777765 4678999999986 99
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++++|+.+. ....+.|. ..++|.+||++.
T Consensus 79 t~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 79 YFIIIHKGT-ILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEEETTE-EEEEECSC-CHHHHHHHHHHH
T ss_pred EEEEEECCE-EEEEecCC-CHHHHHHHHHHH
Confidence 999997542 44466776 456799998764
No 310
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.42 E-value=8.7e-07 Score=74.82 Aligned_cols=105 Identities=8% Similarity=0.102 Sum_probs=80.9
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
.+..+ +.++++..+..+++++|.|+++||++. .+.+.+++ .+.+++.|+.+ .+.+++++|++.. +|+++
T Consensus 98 ~v~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 173 (210)
T 3apq_A 98 EIITL-ERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNS---YPSLF 173 (210)
T ss_dssp TSEEC-CHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCS---SSEEE
T ss_pred ceEEe-cHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCc---CCeEE
Confidence 34455 578888888888999999999999874 44566666 45566888765 5678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhcCCCceEEec
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT 272 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P~~~~l~ 272 (378)
+|+.+. ....|.|..+.++|.+||+...-+.+.+++
T Consensus 174 ~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 174 IFRSGM-AAVKYNGDRSKESLVAFAMQHVRSTVTELS 209 (210)
T ss_dssp EECTTS-CCEECCSCCCHHHHHHHHHHHHHCCSSCC-
T ss_pred EEECCC-ceeEecCCCCHHHHHHHHHHhCcccceecC
Confidence 996553 567789999999999999987655555443
No 311
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.40 E-value=3.4e-06 Score=66.09 Aligned_cols=98 Identities=15% Similarity=0.280 Sum_probs=73.5
Q ss_pred cCCcccCCCHHHHHHhhcc------------CCeEEEEEEcCCCCccH---HHHHHHh-ccCCceeEEEE---ccHHHHh
Q 017071 161 TLGTYSITTTDEAERILTV------------ESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAE 221 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~------------~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~~~~ 221 (378)
...+..+ +.+++...+.. +++++|.|+++||.+.. +.+..++ .+.+++.|+.+ .+.++++
T Consensus 21 ~~~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 21 QSGTIHL-TRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELAR 99 (141)
T ss_dssp --CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred CCCcccc-cHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHH
Confidence 3455666 55666666653 67899999999999843 4566666 55567777765 5778999
Q ss_pred hcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 222 FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 222 ~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|++.. +|++++|..++ ....+.|..+.+.|.+||+..
T Consensus 100 ~~~v~~---~Pt~~~~~~~g-~~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 100 DFGIQS---IPTIWFVPMKG-EPQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HTTCCS---SSEEEEECSSS-CCEEEESCCCHHHHHHHHHHT
T ss_pred HcCCCC---cCEEEEEeCCC-CEEEEeCCCCHHHHHHHHHHH
Confidence 999986 99999997654 445889999999999999875
No 312
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.40 E-value=1.5e-06 Score=64.58 Aligned_cols=96 Identities=13% Similarity=0.219 Sum_probs=71.0
Q ss_pred CcccCCCHHHHH-HhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAE-RILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~-~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
.+..++. ++++ ..++.+++++|.|+++||++. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|++
T Consensus 3 ~v~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 78 (108)
T 2trx_A 3 KIIHLTD-DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG---IPTL 78 (108)
T ss_dssp TEEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCS---SSEE
T ss_pred cceecch-hhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcc---cCEE
Confidence 3555644 5555 445667899999999999874 44556666 45557888765 4678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+ .....+.|..+.++|.+||++.
T Consensus 79 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 79 LLFKNG-EVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEeCC-EEEEEEecCCCHHHHHHHHHHh
Confidence 999654 3445678999999999999763
No 313
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.40 E-value=5.8e-07 Score=66.61 Aligned_cols=96 Identities=7% Similarity=0.014 Sum_probs=73.2
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccH----HHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSA----DVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~----~~~~~~~i~~~~~~ 231 (378)
.....|+|.++++++++.+++++|.|++.||++. .+.|.+.+.. .++.|+.+ .+. +++.+|++.+ ..
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h--~s 82 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKH--ES 82 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCC--CS
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCcc--CC
Confidence 4456889999999999999999999999999974 4455555542 66777754 333 3899999983 27
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHH
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFV 260 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi 260 (378)
|++++|++|......-++.++.+.|.+.+
T Consensus 83 Pq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999999865555556788888887654
No 314
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.40 E-value=1.7e-06 Score=70.21 Aligned_cols=80 Identities=9% Similarity=0.095 Sum_probs=59.9
Q ss_pred HHHHhcCCC-cEEEEEecCCChhHHh-hHHHHHHHHHHhcC-Cc-EEEEEeCcC-----------------------cHH
Q 017071 66 FSEFMGKNR-NVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKD 118 (378)
Q Consensus 66 ~~~~~~~~~-~~lv~F~a~wC~~C~~-~~p~~~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~ 118 (378)
+.+.+ +++ ++|+.||+.||+.|.. ++|.|.+.+++++. ++ .++.|.+|. +.+
T Consensus 41 Lsd~~-~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~ 119 (176)
T 4f82_A 41 VRDQV-AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAA 119 (176)
T ss_dssp HHHHH-TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCH
T ss_pred HHHHh-CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchH
Confidence 44444 455 5677888999999999 99999999999876 67 788887643 346
Q ss_pred HHHHcCCC------C-----CcEEEEEeCCeEeeeeeCC
Q 017071 119 LAKEYNIL------A-----YPTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 119 ~~~~~~v~------~-----~Pt~~~~~~g~~~~~~~g~ 146 (378)
++++||+. | .|+++++++|++...+.+.
T Consensus 120 va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~ 158 (176)
T 4f82_A 120 FTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA 158 (176)
T ss_dssp HHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC
T ss_pred HHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC
Confidence 88888873 2 4777777999877766643
No 315
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.39 E-value=1.4e-06 Score=69.70 Aligned_cols=97 Identities=19% Similarity=0.169 Sum_probs=75.5
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
..+..+ +.+++++.++.+++++|.|+++||++ ..+.|.+++ .+.+++.|..+ .+++++++|++.. +|++
T Consensus 47 ~~~~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~---~Pt~ 122 (155)
T 2ppt_A 47 GKVAGI-DPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQG---IPAF 122 (155)
T ss_dssp SSEEEC-CHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCS---SSEE
T ss_pred CCCccC-CHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCc---CCEE
Confidence 344555 46788888877889999999999987 445566666 55667888866 4678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+.+. ....+.|..+.++|.+||+..
T Consensus 123 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 123 ILFHKGR-ELARAAGARPASELVGFVRGK 150 (155)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred EEEeCCe-EEEEecCCCCHHHHHHHHHHH
Confidence 9997543 445688999999999999874
No 316
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.39 E-value=8e-07 Score=69.81 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=74.7
Q ss_pred CCcccCCCHHHHH-HhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 162 LGTYSITTTDEAE-RILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 162 ~~~~~i~~~~~~~-~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
..+..++ .+++. ..++.+++++|.|+++||.+. .+.+.+++ .+.+++.|+.+ .+++++++|++.. +|+
T Consensus 6 ~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt 81 (140)
T 3hz4_A 6 SSIIEFE-DMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQG---TPT 81 (140)
T ss_dssp TTEEEEC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCE---ESE
T ss_pred cceEEcc-hHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCc---CCE
Confidence 4566664 56666 677778899999999999874 44566666 55566888765 5778999999986 999
Q ss_pred EEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 234 i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++|+.+. ....|.|..+.+.|.+||+..
T Consensus 82 ~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 82 FKFFCHGR-PVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp EEEEETTE-EEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEeCCc-EEEEEcCCCCHHHHHHHHHHH
Confidence 99997653 455788999999999999864
No 317
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.39 E-value=1.4e-06 Score=64.53 Aligned_cols=72 Identities=15% Similarity=0.187 Sum_probs=50.2
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc-----HHHH----HHcCCCCCcEEEEEeCCeEeeeee
Q 017071 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLA----KEYNILAYPTLYLFVAGVRQFQFF 144 (378)
Q Consensus 74 ~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~-----~~~~----~~~~v~~~Pt~~~~~~g~~~~~~~ 144 (378)
+..++.|+++||++|++..+.+++. ++.+-.+|++.. .++. +.+++.++|++++ ++| ++.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~----~~i 89 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDL------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE----KAI 89 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHH------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT----EEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC----EEE
Confidence 3456779999999999999999875 344555666541 2232 3468999999866 333 355
Q ss_pred CCCCHHHHHHHH
Q 017071 145 GERTRDVISAWV 156 (378)
Q Consensus 145 g~~~~~~l~~~i 156 (378)
|..+.+.|.++|
T Consensus 90 gg~~~~~l~~~L 101 (103)
T 3nzn_A 90 VGFKEKEIRESL 101 (103)
T ss_dssp ESCCHHHHHHHT
T ss_pred EcCCHHHHHHHh
Confidence 677888887765
No 318
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.39 E-value=8.9e-07 Score=67.87 Aligned_cols=96 Identities=13% Similarity=0.220 Sum_probs=68.7
Q ss_pred CcccCCCHHHHH-HhhccCCeEEEEEEcCCCC--------------c---cHHHHHHHh-ccCCceeEEEE---ccHHHH
Q 017071 163 GTYSITTTDEAE-RILTVESKLVLGFLHDLEG--------------M---ESEELAAAS-KLHSDVNFYQT---TSADVA 220 (378)
Q Consensus 163 ~~~~i~~~~~~~-~~~~~~~~~~v~f~~~~~~--------------~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~ 220 (378)
.+..+++ ++++ ..++.+++++|.|+++||+ + ..+.+.+++ .+.+++.|..+ .+.+++
T Consensus 4 ~v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 4 KIIHLTD-DSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp SCEECCS-TTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred ccEecCh-hhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 4556644 5554 5567788999999999999 7 355566655 44456777765 567899
Q ss_pred hhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 221 EFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 221 ~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|++.. +|++++|+.+ .....+.|..+.++|.+||+..
T Consensus 83 ~~~~v~~---~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 83 PKYGIRG---IPTLLLFKNG-EVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGTCCB---SSEEEEEESS-SEEEEEESCCCHHHHHHHHTTT
T ss_pred HHcCCCc---cCEEEEEECC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 9999986 9999999654 3455688999999999999764
No 319
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.38 E-value=1.2e-06 Score=66.81 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=72.8
Q ss_pred CCcccCCCHHHH-HHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 162 LGTYSITTTDEA-ERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 162 ~~~~~i~~~~~~-~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
..+..++ .+++ +..++.+++++|.|+++||.+. .+.+.+++ .+.+++.|+.+ .+.+++++|++.. +|+
T Consensus 3 ~~v~~l~-~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt 78 (122)
T 3aps_A 3 QASIDLT-PQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKA---YPS 78 (122)
T ss_dssp CCSEECC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred cchhcCC-HHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCc---cce
Confidence 3456664 5666 4566778899999999999874 44566666 45557888765 4678999999986 999
Q ss_pred EEEeecCCCCccccCCC----CCHHHHHHHHHhc
Q 017071 234 LIFLHLEAGKATPFRHQ----FTRLAIANFVTHT 263 (378)
Q Consensus 234 i~~~~~~~~~~~~y~g~----~~~~~l~~fi~~~ 263 (378)
+++|+.+. ....+.|. .+.+.|.+||...
T Consensus 79 ~~~~~~~~-~~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 79 VKLYQYER-AKKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEEEG-GGTEEEEEEECCSCHHHHHHHHHHH
T ss_pred EEEEeCCC-ccceeeccccCcCCHHHHHHHHHHH
Confidence 99998765 35556665 7899999999864
No 320
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.38 E-value=1.2e-06 Score=68.85 Aligned_cols=104 Identities=9% Similarity=0.065 Sum_probs=65.1
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCC--CCc---cHHHHHHHh-ccCCcee--EEEE---ccHHHHhhcCCCCCCCC
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDL--EGM---ESEELAAAS-KLHSDVN--FYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~--~~~---~~~~~~~~a-~~~~~~~--f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
.+..+++ +++++++..++.++|.|+.+| |++ ..+.+.+++ ++ +++. |+.+ .+++++++|++.. +
T Consensus 18 ~~~~l~~-~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~---i 92 (142)
T 2es7_A 18 GWQPVEA-STVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRR---F 92 (142)
T ss_dssp TCEECCC-C--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCS---S
T ss_pred cCccccc-ccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCc---C
Confidence 5666655 888888888777888787766 554 567788877 55 7788 8766 4667999999987 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhcCCCceEEec
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT 272 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P~~~~l~ 272 (378)
|++++|+.+. ....+.|..+.++|.+||+...-+...+.+
T Consensus 93 PT~~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 93 PATLVFTDGK-LRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp SEEEEESCC-----CEESCCCHHHHHHHHHHHHC-------
T ss_pred CeEEEEeCCE-EEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 9999997653 556788999999999999987555444444
No 321
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.38 E-value=1.4e-06 Score=65.35 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=72.0
Q ss_pred CCcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
..+..+++.+..+..++.+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+.+++++|++.. +|++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 81 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMS---IPTL 81 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCc---ccEE
Confidence 3456665544444555677899999999999874 34556666 45466777765 4678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++++.+. ....+.|..+.++|.+||++.
T Consensus 82 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 82 NVYQGGE-VAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHTHHH
T ss_pred EEEeCCE-EEEEEeCCCCHHHHHHHHHHH
Confidence 9997553 445678998999999998763
No 322
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.37 E-value=1e-06 Score=64.59 Aligned_cols=60 Identities=5% Similarity=0.075 Sum_probs=46.3
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHc-----CCCCCcEEEEEeCCeEe
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQ 140 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~-----~v~~~Pt~~~~~~g~~~ 140 (378)
.+.-++.|+++||++|++..+.|++. ++.+..+|++.+++..+.+ |..++|++ |.+|+.+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 34456779999999999999999875 4667788888887655544 89999987 4478544
No 323
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.37 E-value=1.6e-06 Score=64.47 Aligned_cols=95 Identities=7% Similarity=0.088 Sum_probs=72.3
Q ss_pred cccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEE
Q 017071 164 TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
+..+ +.+++++.++.+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|++++
T Consensus 3 v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~ 78 (109)
T 2yzu_A 3 PIEV-TDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMS---IPTVIL 78 (109)
T ss_dssp CEEC-CTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCS---SSEEEE
T ss_pred ceEc-cHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCc---CCEEEE
Confidence 3455 346667778888999999999999874 34556666 44456887765 4678999999986 999999
Q ss_pred eecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 237 LHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|+.+. ....+.|..+.++|.+||++.
T Consensus 79 ~~~g~-~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 79 FKDGQ-PVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp EETTE-EEEEEESCCCHHHHHHHHHTT
T ss_pred EeCCc-EeeeEeCCCCHHHHHHHHHHH
Confidence 96542 444678999999999999875
No 324
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.37 E-value=1.5e-06 Score=67.30 Aligned_cols=96 Identities=17% Similarity=0.191 Sum_probs=72.9
Q ss_pred CcccCCCHHHHHHhh-ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccC----CceeEEEE---ccHHHHhhcCCCCCCC
Q 017071 163 GTYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLH----SDVNFYQT---TSADVAEFFHIHPKSK 230 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~----~~~~f~~~---~~~~~~~~~~i~~~~~ 230 (378)
.+..++ .+++++.+ +.+++++|.|+++||.+. .+.+.+++ .+. +++.|+.+ .+.+++++|++..
T Consensus 8 ~v~~l~-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~--- 83 (133)
T 1x5d_A 8 DVIELT-DDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRG--- 83 (133)
T ss_dssp SCEECC-TTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCS---
T ss_pred cCEEcC-HhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCe---
Confidence 455664 46666654 567899999999999873 34555555 333 56888765 4678999999986
Q ss_pred CCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 231 ~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|++++|+.+. ....|.|..+.++|.+||.+.
T Consensus 84 ~Pt~~~~~~g~-~~~~~~G~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 84 FPTIKIFQKGE-SPVDYDGGRTRSDIVSRALDL 115 (133)
T ss_dssp SSEEEEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred eCeEEEEeCCC-ceEEecCCCCHHHHHHHHHHH
Confidence 99999999853 566788999999999999864
No 325
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=1.4e-06 Score=66.89 Aligned_cols=102 Identities=13% Similarity=0.155 Sum_probs=75.5
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCC-ceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~-~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
.+..+ +.+++++.++. .++|.|+++||.+. .+.+.+++ .+.+ ++.|+.+ .+.+++++|++.. +|++
T Consensus 8 ~v~~l-~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~Pt~ 81 (126)
T 1x5e_A 8 NVRVI-TDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINA---LPTI 81 (126)
T ss_dssp SEEEC-CTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred ccEEe-cHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcc---cCEE
Confidence 45566 45677777654 38899999999874 34455555 3332 5777765 5678999999986 9999
Q ss_pred EEeecCCCCccccCCCCCHHHHHHHHHhcCCCceEEec
Q 017071 235 IFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT 272 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P~~~~l~ 272 (378)
++|+.+ +...|.|..+.++|.+||++...+.+..++
T Consensus 82 ~~~~~G--~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 117 (126)
T 1x5e_A 82 YHCKDG--EFRRYQGPRTKKDFINFISDKEWKSIEPVS 117 (126)
T ss_dssp EEEETT--EEEECCSCCCHHHHHHHHHTCGGGGSCEEC
T ss_pred EEEeCC--eEEEeecCCCHHHHHHHHHHHhhccCCCch
Confidence 999655 457889999999999999988766555554
No 326
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.36 E-value=1.8e-06 Score=65.59 Aligned_cols=96 Identities=16% Similarity=0.214 Sum_probs=71.3
Q ss_pred cccCCCHHHHHHhh-ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
.....+.+++++.+ +.+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+.+++++|++.. +|+++
T Consensus 14 ~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~ 90 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSA---VPTVL 90 (119)
T ss_dssp EEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCS---SSEEE
T ss_pred EEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCc---ccEEE
Confidence 33445677777654 567889999999999874 34455555 45567877765 4678999999987 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|+.+ .....+.|..+.+.|.+||++.
T Consensus 91 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 91 AMKNG-DVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 99654 2445678988999999999753
No 327
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.36 E-value=2.5e-06 Score=65.45 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=73.6
Q ss_pred CCcccCCCHHHHHHhhcc----CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
..+..+.+.+++++.+.. +++++|.|+++||.+. .+.+.+++....++.|..+ .+.+++++|++.. +
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~ 92 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQA---M 92 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCS---S
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCc---c
Confidence 457778888999888764 7889999999999874 4455666644446777765 4678999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++++++.+. ....+.| .+.++|.+||++.
T Consensus 93 Pt~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGK-ILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEECCE-EEEEEeC-CCHHHHHHHHHHh
Confidence 9999997553 3445667 5889999999764
No 328
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.35 E-value=1.2e-06 Score=66.40 Aligned_cols=97 Identities=8% Similarity=0.116 Sum_probs=70.6
Q ss_pred CcccCCCHHHHHHhh-ccCC--eEEEEEEcCCCCc---cHHHHHHHhccCCceeEEEEccHHHHhhcCCCCCCCCCeEEE
Q 017071 163 GTYSITTTDEAERIL-TVES--KLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~-~~~~--~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
.+.++++ +++.+.+ +... .++|.|+++||++ ..+.+.++|....++.|..+.-.+.+++|++.. .||+++
T Consensus 4 ~v~~it~-~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~~---~PT~~~ 79 (118)
T 3evi_A 4 ELREISG-NQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNC---LPTIFV 79 (118)
T ss_dssp SCEECCG-GGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGTSTTCCGGG---CSEEEE
T ss_pred ceEEeCH-HHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHhHHHCCCCC---CCEEEE
Confidence 4567744 5555544 4443 8999999999987 456677888656779999886666688999986 999999
Q ss_pred eecCCCCccccCC-------CCCHHHHHHHHHhcC
Q 017071 237 LHLEAGKATPFRH-------QFTRLAIANFVTHTK 264 (378)
Q Consensus 237 ~~~~~~~~~~y~g-------~~~~~~l~~fi~~~~ 264 (378)
|+++. ....+.| +++.++|..||.++.
T Consensus 80 fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 80 YKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEVG 113 (118)
T ss_dssp EETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTTT
T ss_pred EECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHcC
Confidence 99874 2223322 368899999998753
No 329
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=4.4e-06 Score=68.05 Aligned_cols=90 Identities=9% Similarity=0.064 Sum_probs=72.1
Q ss_pred cCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEeCcCcH---------------HHHH---HcCCCCCc
Q 017071 71 GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEK---------------DLAK---EYNILAYP 129 (378)
Q Consensus 71 ~~~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~~~---------------~~~~---~~~v~~~P 129 (378)
.++|+++|+++++||..|..+.... +++.+.++.++.+...|.+... .++. .|++.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 4579999999999999999997544 4455556668999999988764 3444 48999999
Q ss_pred EEEEEe-C---CeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 130 TLYLFV-A---GVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 130 t~~~~~-~---g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
++.++. . ++++.+..|..+++++.+.+.+.+
T Consensus 133 ~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 133 LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999996 3 356789999999999998887665
No 330
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.34 E-value=1.8e-06 Score=65.65 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=73.8
Q ss_pred cCCcccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 161 TLGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
...+..+++.+.....++.+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~---~Pt 87 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVS---IPT 87 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCc---CCE
Confidence 45567776644444566778899999999999873 44556666 45556887765 4778999999986 999
Q ss_pred EEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 234 i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++++.+ .....+.|..+.+.|.+||++.
T Consensus 88 ~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 88 LILFKDG-QPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHTCSC
T ss_pred EEEEECC-EEEEEecCCCCHHHHHHHHHHH
Confidence 9999754 3445688999999999999765
No 331
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.34 E-value=1.8e-06 Score=65.36 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=71.9
Q ss_pred cccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+..+++.+++++.++ .+++++|.|+++||.+. .+.+.+++... ++.|+.+ .+.+++++|++.. +|+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~ 90 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISA---MPTFI 90 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCS---SSEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCc---cceEE
Confidence 677878788888887 57889999999999874 34556666433 6777655 4678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++.+. ....+.| .+.++|.+||++.
T Consensus 91 ~~~~G~-~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 91 AIKNGE-KVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EEETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred EEeCCc-EEEEEeC-CCHHHHHHHHHHh
Confidence 997553 4446678 5888999999764
No 332
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.33 E-value=2e-06 Score=63.16 Aligned_cols=91 Identities=13% Similarity=0.159 Sum_probs=69.4
Q ss_pred CHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCC
Q 017071 169 TTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAG 242 (378)
Q Consensus 169 ~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~ 242 (378)
+.+++++.++.+++++|.|+++||.+. .+.+.+++....++.|..+ .+.+++++|++.. +|++++++.+ .
T Consensus 5 ~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~~~~g-~ 80 (104)
T 2e0q_A 5 DSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMS---LPTVIFFKDG-E 80 (104)
T ss_dssp CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SCEEEEEETT-E
T ss_pred CHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccc---cCEEEEEECC-e
Confidence 346777777788899999999999874 3455666643333777765 4678999999986 9999999654 3
Q ss_pred CccccCCCCCHHHHHHHHHhc
Q 017071 243 KATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 243 ~~~~y~g~~~~~~l~~fi~~~ 263 (378)
....+.|..+.+++.+||++.
T Consensus 81 ~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 81 PVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EEEEEESCCCHHHHHHHHHHH
T ss_pred EhhhccCCCCHHHHHHHHHHH
Confidence 445778999999999999864
No 333
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.31 E-value=2e-06 Score=66.40 Aligned_cols=97 Identities=12% Similarity=0.204 Sum_probs=72.3
Q ss_pred CCcccCCCHHHHH-HhhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 162 LGTYSITTTDEAE-RILTVESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 162 ~~~~~i~~~~~~~-~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
..+..++. ++++ ..++.+++++|.|+++||.+ ..+.+.+++ .+.+++.|..+ .+.+++++|++.. +|+
T Consensus 22 ~~v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt 97 (128)
T 2o8v_B 22 DKIIHLTD-DSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG---IPT 97 (128)
T ss_dssp CCSEEECT-TTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCS---SSE
T ss_pred cccEecCh-hhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCc---cCE
Confidence 34666644 5565 44567889999999999987 345566666 45557888765 4667899999986 999
Q ss_pred EEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 234 i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++|+.+ .....+.|..+.++|.+||++.
T Consensus 98 ~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 98 LLLFKNG-EVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEeCC-EEEEEEcCCCCHHHHHHHHHHh
Confidence 9999654 3445678999999999999763
No 334
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.31 E-value=3.5e-06 Score=62.44 Aligned_cols=95 Identities=12% Similarity=0.180 Sum_probs=70.2
Q ss_pred cccCCCHHHHHHhh-ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+..+ +.+++++.+ +.+++++|.|+++||++. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|+++
T Consensus 3 v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~ 78 (107)
T 1dby_A 3 AGAV-NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRS---IPTIM 78 (107)
T ss_dssp CEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCS---SCEEE
T ss_pred cEec-cHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCc---CCEEE
Confidence 3344 456676654 557889999999999874 34556665 45556777765 4678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++.+. ....+.|..+.+++.+||++.
T Consensus 79 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 79 VFKGGK-KCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp EESSSS-EEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCCE-EEEEEeCCCCHHHHHHHHHHH
Confidence 996543 445678988999999999764
No 335
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.30 E-value=4.2e-06 Score=66.42 Aligned_cols=96 Identities=22% Similarity=0.297 Sum_probs=73.7
Q ss_pred cccCCCHHHHHHhh--ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 164 TYSITTTDEAERIL--TVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 164 ~~~i~~~~~~~~~~--~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
+..+.+.+++++.+ +.+++++|.|+++||++. .+.+.+++ .+.+++.|+.+ .+++++++|++.. +|++
T Consensus 5 l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~---~Pt~ 81 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISY---IPST 81 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCS---SSEE
T ss_pred eeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCc---cCeE
Confidence 45567888898888 458899999999999974 44566666 45555887765 5678999999986 9999
Q ss_pred EEeecCCCCc---------cccCC-CCCHHHHHHHHHhc
Q 017071 235 IFLHLEAGKA---------TPFRH-QFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~~~~~~~---------~~y~g-~~~~~~l~~fi~~~ 263 (378)
++++++. .. ..+.| ..+.++|.++|+..
T Consensus 82 ~~~~~G~-~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 82 VFFFNGQ-HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEEETTE-EEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EEEECCe-EEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9888763 33 46678 77889999998763
No 336
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.30 E-value=1.1e-06 Score=66.35 Aligned_cols=67 Identities=16% Similarity=0.331 Sum_probs=46.7
Q ss_pred cHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc----HH----HHHHcCCCCCcEEEEEeC
Q 017071 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KD----LAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~----~~----~~~~~~v~~~Pt~~~~~~ 136 (378)
.+++.+..++ ++.|+++||++|++..+.|+++ ++.+-.+|++.. ++ +.+.+|+.++|++ |.+
T Consensus 11 ~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~ 80 (113)
T 3rhb_A 11 SIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVC 80 (113)
T ss_dssp HHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 4445555555 5669999999999999999864 344556666542 22 5556799999998 458
Q ss_pred CeEee
Q 017071 137 GVRQF 141 (378)
Q Consensus 137 g~~~~ 141 (378)
|+.+.
T Consensus 81 g~~ig 85 (113)
T 3rhb_A 81 GKHIG 85 (113)
T ss_dssp TEEEE
T ss_pred CEEEc
Confidence 85544
No 337
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.29 E-value=2.2e-06 Score=63.29 Aligned_cols=94 Identities=11% Similarity=0.135 Sum_probs=70.5
Q ss_pred ccCCCHHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEe
Q 017071 165 YSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (378)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~ 237 (378)
..++ .+++++.++.+++++|.|+++||++. .+.+.+++ .+.+++.|..+ .+.+++++|++.. +|+++++
T Consensus 3 ~~l~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~Pt~~~~ 78 (105)
T 1nsw_A 3 MTLT-DANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMS---IPTLILF 78 (105)
T ss_dssp EEEC-TTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCS---SSEEEEE
T ss_pred eecc-HHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCcc---ccEEEEE
Confidence 3443 35667778888899999999999874 44555666 44556777755 5678999999986 9999999
Q ss_pred ecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.+ .....+.|..+.+.|.+||++.
T Consensus 79 ~~G-~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 79 KGG-RPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHTTTT
T ss_pred eCC-eEEEEEecCCCHHHHHHHHHHH
Confidence 654 3445678988999999998754
No 338
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.29 E-value=1.6e-06 Score=62.61 Aligned_cols=57 Identities=14% Similarity=0.319 Sum_probs=44.0
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHH----HHHHcCCCCCcEEEEEeCCeEe
Q 017071 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLFVAGVRQ 140 (378)
Q Consensus 76 ~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~g~~~ 140 (378)
.++.|+++||++|++..+.+++. ++.|..+|+++++. +.+.+++.++|++ +.+|+.+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 36789999999999999988764 46677888887654 4457899999975 4578543
No 339
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.29 E-value=2.8e-06 Score=81.40 Aligned_cols=163 Identities=12% Similarity=0.087 Sum_probs=100.8
Q ss_pred CCcccCCCHHHHHHhh-ccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCC---ceeEEEEc-----cHHHHhhcCCCCC
Q 017071 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGM---ESEELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPK 228 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~---~~~f~~~~-----~~~~~~~~~i~~~ 228 (378)
..+..++. +++++.+ +.+++++|.|+++||++ ..+.+.+++ .+.+ .+.|+.+. +.+++++|+|..
T Consensus 12 ~~V~~Lt~-~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~- 89 (519)
T 3t58_A 12 DPLTLLDA-DSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG- 89 (519)
T ss_dssp SSSEEECT-TTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS-
T ss_pred CCcEECCh-HHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc-
Confidence 34566644 5566554 55689999999999997 445566666 4443 68888664 578999999987
Q ss_pred CCCCeEEEeecCCC---CccccCCCCCHHHHHHHHHhc----C------CCceEEecccchhhhhccchH---HH-----
Q 017071 229 SKRPALIFLHLEAG---KATPFRHQFTRLAIANFVTHT----K------HPLVVTLTIHNAQFVFQDPRK---QL----- 287 (378)
Q Consensus 229 ~~~P~i~~~~~~~~---~~~~y~g~~~~~~l~~fi~~~----~------~P~~~~l~~~~~~~~~~~~~~---~l----- 287 (378)
+|++++|+.+.. ....+.|..+.+.|.+||.+. . .|.+..++.+++..++..... .+
T Consensus 90 --~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~ 167 (519)
T 3t58_A 90 --FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERE 167 (519)
T ss_dssp --BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECT
T ss_pred --cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCC
Confidence 999999996432 334556778888888888753 2 233444555555444432211 00
Q ss_pred --------HHHhhhcC------cchhhhhhHhhcCCCCCCCcEEEEEcCCCccccCC
Q 017071 288 --------LHVYVEMN------SEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLN 330 (378)
Q Consensus 288 --------~f~~~d~~------~~~~~~~l~~~~gi~~~~~p~i~i~~~~~~~y~~~ 330 (378)
...+.+.. ...-...+++.||++. .|.+++++.+++...++
T Consensus 168 ~s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~--~Pslvl~~~nGk~~~~~ 222 (519)
T 3t58_A 168 DSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTD--FPSCYLLLRNGSVSRVP 222 (519)
T ss_dssp TCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC--SSEEEEEETTSCEEECC
T ss_pred chHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCC--CCeEEEEeCCCceeecc
Confidence 11111100 0010236789999975 58999998866544433
No 340
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.28 E-value=2.4e-06 Score=64.04 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=72.6
Q ss_pred CCcccCCCHHHHHHhhcc----CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
..+..+.+.+++++.+.. +++++|.|+++||.+. .+.+.+++....++.|..+ .+++++++|++.. +
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEA---M 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSS---T
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCc---c
Confidence 356778888899888865 7889999999999874 3445566644446777765 4678999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++++++.+. ....+.| .+.+.|.+||++.
T Consensus 81 Pt~~~~~~G~-~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 81 PTFIFLKDGK-LVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp TEEEEEETTE-EEEEEEC-CCTTHHHHHHHHH
T ss_pred cEEEEEeCCE-EEEEEec-CCHHHHHHHHHHh
Confidence 9999997542 3345567 5778899998764
No 341
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.28 E-value=4.2e-06 Score=63.19 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=74.2
Q ss_pred cCCcccCCCHHHHHHhhcc----CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCC
Q 017071 161 TLGTYSITTTDEAERILTV----ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~----~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~ 230 (378)
+..+..+.+.+++++.+.. +++++|.|+.+||.+. .+.+.+++....++.|..+ .+.+++++|++..
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~--- 81 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEA--- 81 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCS---
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCc---
Confidence 3467788888999888865 7889999999999874 4455666644446777755 4678999999986
Q ss_pred CCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 231 ~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|++++++.+. ....+.| .+.++|.+||.+.
T Consensus 82 ~Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGE-KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCe-EEEEecC-CCHHHHHHHHHHH
Confidence 99999997553 3445667 5888999999864
No 342
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=98.28 E-value=6.1e-06 Score=69.30 Aligned_cols=88 Identities=15% Similarity=0.314 Sum_probs=70.0
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcEEEEEeCcC----------------------------cHHHHH
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (378)
+++.+++.|| +.||+.|..+...|.+...+++. ++.++.|.+|. +.++++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~ 134 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIAR 134 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHH
Confidence 6889999999 89999999999999999999987 88899888753 356899
Q ss_pred HcCCC----C--CcEEEEEe-CCeEeeeee----CCCCHHHHHHHHHHH
Q 017071 122 EYNIL----A--YPTLYLFV-AGVRQFQFF----GERTRDVISAWVREK 159 (378)
Q Consensus 122 ~~~v~----~--~Pt~~~~~-~g~~~~~~~----g~~~~~~l~~~i~~~ 159 (378)
+||+- + +-.+++++ +|++...+. -.++.+++.+.|+.+
T Consensus 135 ~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 135 SYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 99983 2 34788888 886654332 347888888887654
No 343
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.28 E-value=1.6e-06 Score=62.10 Aligned_cols=74 Identities=12% Similarity=0.124 Sum_probs=52.6
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc----HHHHHHcCC-----CCCcEEEEEeCCeEeeeeeCC
Q 017071 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KDLAKEYNI-----LAYPTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 76 ~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~v-----~~~Pt~~~~~~g~~~~~~~g~ 146 (378)
.++.|+++||++|++..+.+++.. -.+.+..||.+++ .++.+.+|. .++|++++ +|+.+.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~----- 73 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG----- 73 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE-----
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe-----
Confidence 477899999999999998886642 2455666666554 457777888 99999854 785432
Q ss_pred CCHHHHHHHHHHHhc
Q 017071 147 RTRDVISAWVREKMT 161 (378)
Q Consensus 147 ~~~~~l~~~i~~~~~ 161 (378)
..+++.+++++.++
T Consensus 74 -g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 74 -GFTELKANADKILN 87 (89)
T ss_dssp -SHHHHHHTHHHHTT
T ss_pred -ChHHHHHHHHHHhc
Confidence 45677777766553
No 344
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.26 E-value=4.2e-06 Score=63.71 Aligned_cols=97 Identities=13% Similarity=0.171 Sum_probs=72.6
Q ss_pred CCcccCCCHHHHHHhhcc----CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
.+...+.+.+++++.+.. +++++|.|+++||.+. .+.+.+++....++.|..+ .+.+++++|++.. +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEA---M 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---S
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCc---c
Confidence 345556678888887754 7889999999999874 3456666644444777765 4678999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++++++.+. ....+.|.. .++|.+||+..
T Consensus 89 Pt~~~~~~G~-~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGD-VKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred cEEEEEeCCE-EEEEEeCcC-HHHHHHHHHHH
Confidence 9999997553 445678887 89999999864
No 345
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.26 E-value=4.2e-06 Score=63.38 Aligned_cols=94 Identities=10% Similarity=0.064 Sum_probs=69.6
Q ss_pred cccCCCHHHHHHhhccCCeEEEEEEcCCCCccH---HHHHHHh-ccCCceeEEEEc-------cHHHHhhcCCCCCCCCC
Q 017071 164 TYSITTTDEAERILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQTT-------SADVAEFFHIHPKSKRP 232 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~~-------~~~~~~~~~i~~~~~~P 232 (378)
+..+ +.+++++.+..+++++|.|+++||++.. +.+.+++ .+...+.+..+. ..+++++|++.. +|
T Consensus 14 ~~~~-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~---~P 89 (118)
T 1zma_A 14 LEVT-TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPT---VP 89 (118)
T ss_dssp SEEC-CHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCS---SC
T ss_pred hhcC-CHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCC---CC
Confidence 4444 6788888888888999999999999743 4455555 344455555322 246789999986 99
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
++++|+.+. ....+.|..+.++|.+||++
T Consensus 90 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 90 GFVHITDGQ-INVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp EEEEEETTE-EEEECCTTCCHHHHHHHHTC
T ss_pred eEEEEECCE-EEEEecCCCCHHHHHHHhhC
Confidence 999998653 45678899999999999863
No 346
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.26 E-value=4.9e-06 Score=61.33 Aligned_cols=94 Identities=10% Similarity=0.235 Sum_probs=68.1
Q ss_pred ccCCCHHHHHHh-hccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEE
Q 017071 165 YSITTTDEAERI-LTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 165 ~~i~~~~~~~~~-~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~ 236 (378)
..++ .+++++. .+.++++++.|+++||.+. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|++++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~ 78 (105)
T 1fb6_A 3 QDVN-DSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRS---IPTVLF 78 (105)
T ss_dssp EECC-TTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSEEEE
T ss_pred eech-hhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCc---ccEEEE
Confidence 3443 3555554 4557789999999999874 34555655 45556777765 5678999999986 999999
Q ss_pred eecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 237 LHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++.+. ....+.|..+.+.+.+||++.
T Consensus 79 ~~~g~-~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 79 FKNGE-RKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp EETTE-EEEEEEECCCHHHHHHHHHHH
T ss_pred EeCCe-EEEEEecCCCHHHHHHHHHhh
Confidence 97542 445677888999999999753
No 347
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=98.25 E-value=2.1e-06 Score=71.18 Aligned_cols=40 Identities=10% Similarity=0.228 Sum_probs=34.0
Q ss_pred CCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCcEEEEEe
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVD 112 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd 112 (378)
+++++|.|+..|||||+++.|.+ .++.+.+.+++.+..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEe
Confidence 47899999999999999999987 68999988766666555
No 348
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.25 E-value=3.8e-05 Score=74.01 Aligned_cols=171 Identities=12% Similarity=0.020 Sum_probs=120.6
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCe-EeeeeeCCCCHHH
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV-RQFQFFGERTRDV 151 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~-~~~~~~g~~~~~~ 151 (378)
.+++-+.++.+.|..|.++...++++++. .+++.+-..+ ... ...|++.+.++|+ .-.+|.|...-.+
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~~~--------~~~p~~~~~~~~~~~~i~f~g~p~g~e 86 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--TLP--------VRKPSFLITNPGSQQGPRFAGSPLGHE 86 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--TSS--------SCSSEEEEECTTCCCSCEEESCCCGGG
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--Ccc--------cCCCEEEEecCCCcceEEEeccCcchh
Confidence 46777777788899999999999998765 4467763322 110 4679999988763 4578999888888
Q ss_pred HHHHHHHHhcC--CcccCCCHHHHHHhhcc-CCeEEEEEEcCCCCccH---HHHHHHhccCCceeEEEE---ccHHHHhh
Q 017071 152 ISAWVREKMTL--GTYSITTTDEAERILTV-ESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEF 222 (378)
Q Consensus 152 l~~~i~~~~~~--~~~~i~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~~~~~ 222 (378)
+..|+...+.. ....+ +.+.++.+.+. .+..++.|+++||.+.. +.+.+++....++.+..+ ..++++++
T Consensus 87 ~~s~~~~l~~~~~~~~~~-~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~ 165 (521)
T 1hyu_A 87 FTSLVLALLWTGGHPSKE-AQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITE 165 (521)
T ss_dssp HHHHHHHHHHHTTCCCCS-CHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHH
Confidence 88888776532 23333 45555555433 45667888899999854 456666644557887754 56889999
Q ss_pred cCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 223 ~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++.. .|++++ ++ +. ...|..+.++|.+|+...
T Consensus 166 ~~i~s---vPt~~i--~g--~~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 166 RNVMG---VPAVFV--NG--KE-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp TTCCS---SSEEEE--TT--EE-EEESCCCHHHHHHHHCCS
T ss_pred hCCCc---cCEEEE--CC--EE-EecCCCCHHHHHHHHhhc
Confidence 99986 999987 32 33 344888999999999764
No 349
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.24 E-value=2.9e-05 Score=61.27 Aligned_cols=108 Identities=12% Similarity=0.188 Sum_probs=85.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEecC-CChhHHhhHHHHHHHHHHhcCCcEEEEEeC--cCcHHHHHHcCCCC--CcEE
Q 017071 57 DVVSLNGKNFSEFMGKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDA--YLEKDLAKEYNILA--YPTL 131 (378)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~F~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~--~~~~~~~~~~~v~~--~Pt~ 131 (378)
-|..+|.++..++..++-++.+.++.. .-..-..+++.+.++|+++++++.|+.+|. ++...+.+.||+.. .|++
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v 94 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAV 94 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEE
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCEE
Confidence 678899999988887777766554443 333456788999999999999999999999 66677889999986 9999
Q ss_pred EEEeC-C-eEeeeee-CCCCHHHHHHHHHHHhcCCc
Q 017071 132 YLFVA-G-VRQFQFF-GERTRDVISAWVREKMTLGT 164 (378)
Q Consensus 132 ~~~~~-g-~~~~~~~-g~~~~~~l~~~i~~~~~~~~ 164 (378)
.+++. + ...+.+. |..+.+.|.+|+++.+...+
T Consensus 95 ~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 95 RLITLEEEMTKYKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp EEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred EEEecccccccCCCCcccCCHHHHHHHHHHHHcCCc
Confidence 99974 3 1223333 78899999999999987665
No 350
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.23 E-value=1.5e-06 Score=66.99 Aligned_cols=89 Identities=12% Similarity=0.168 Sum_probs=67.8
Q ss_pred HHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCC
Q 017071 171 DEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGK 243 (378)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~ 243 (378)
+.++.....+++++|.|+++||++. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|++++++.+ ..
T Consensus 33 ~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~~~~~G-~~ 108 (128)
T 3ul3_B 33 NIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKS---LPTIILLKNK-TM 108 (128)
T ss_dssp SSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCS---SSEEEEEETT-EE
T ss_pred cHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCC---cCEEEEEECC-EE
Confidence 3444555678899999999999874 34455555 44457777755 5678999999986 9999999654 35
Q ss_pred ccccCCCCCHHHHHHHHHhc
Q 017071 244 ATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 244 ~~~y~g~~~~~~l~~fi~~~ 263 (378)
...+.|..+.++|.+||+++
T Consensus 109 ~~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 109 LARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp EEEESSCCCHHHHHHHHTTC
T ss_pred EEEecCCCCHHHHHHHHHhC
Confidence 56788999999999999764
No 351
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.23 E-value=9.5e-06 Score=63.16 Aligned_cols=97 Identities=14% Similarity=0.238 Sum_probs=71.4
Q ss_pred CcccCCCHHHHHHhhc------------cCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhc
Q 017071 163 GTYSITTTDEAERILT------------VESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFF 223 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~------------~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~ 223 (378)
.+..+ +.+++.+.+. .+++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+.+++++|
T Consensus 10 ~v~~l-~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~ 88 (136)
T 2l5l_A 10 KVIHL-TKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAF 88 (136)
T ss_dssp SEEEE-CHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred ceEEe-cchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHc
Confidence 34455 4466666554 35789999999999874 34566666 45567888765 467899999
Q ss_pred CCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 224 HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 224 ~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
++.. +|++++|..++ +...+.|..+.+.|.+||++..
T Consensus 89 ~v~~---~Pt~~~~~~~G-~~~~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 89 GIRS---IPSILFIPMEG-KPEMAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp TCCS---SCEEEEECSSS-CCEEEESCCCHHHHHHHHHHHH
T ss_pred CCCC---CCEEEEECCCC-cEEEEeCCCCHHHHHHHHHHHh
Confidence 9986 99999994433 3447889999999999998753
No 352
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.21 E-value=1.5e-05 Score=61.94 Aligned_cols=100 Identities=14% Similarity=0.158 Sum_probs=73.3
Q ss_pred cCCcccCCCHHHHHHhhcc--CCeEEEEEEcCCCCccHHHH------HHHhccCCceeEEEEc-------cHHHHhhcCC
Q 017071 161 TLGTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESEEL------AAASKLHSDVNFYQTT-------SADVAEFFHI 225 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~------~~~a~~~~~~~f~~~~-------~~~~~~~~~i 225 (378)
.+.+..+.+.++++..+.. +++++|.|+++||.+....- ..+++...++.+..+. +.+++++|++
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC
Confidence 3456668888888877765 67899999999999864432 4444333457776542 3578999999
Q ss_pred CCCCCCCeEEEeecCCCCc--cccCCCCCHHHHHHHHHhc
Q 017071 226 HPKSKRPALIFLHLEAGKA--TPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~~~~--~~y~g~~~~~~l~~fi~~~ 263 (378)
.. +|+++++..++... ..+.|..+.++|.++++..
T Consensus 90 ~~---~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 90 LG---LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp CS---SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CC---CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 86 99999995433233 5789999999999999865
No 353
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.18 E-value=7e-06 Score=64.25 Aligned_cols=96 Identities=9% Similarity=0.091 Sum_probs=62.4
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
.+..+ +.+++...+..++.++|.|+++||.+ ..+.+..++ .+.+++.|+.+ .+.+++++|++.. +|+++
T Consensus 34 ~v~~l-~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 109 (140)
T 1v98_A 34 WVVEA-DEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRS---VPTLV 109 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCS---SSEEE
T ss_pred ccccC-CHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCc---cCEEE
Confidence 34455 44666666655555899999999986 345566666 45557888765 4678999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|+.+. ....+.|..+.+.|.+||...
T Consensus 110 ~~~~G~-~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 110 LFRRGA-PVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCCc-EEEEEeCCCCHHHHHHHHHHH
Confidence 997553 445678998999999999864
No 354
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.16 E-value=3e-06 Score=63.92 Aligned_cols=68 Identities=15% Similarity=0.327 Sum_probs=48.2
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcC--c-----HHHHHHcCCCCCcEEEEEeC
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--E-----KDLAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~-----~~~~~~~~v~~~Pt~~~~~~ 136 (378)
+.+++.+..++ ++.|+++||++|++..+.+.+. ++.+-.+|++. + ..+.+..|..++|++++ +
T Consensus 8 ~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 8 RHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 45666665555 3349999999999999998874 35566667664 3 23567788999999866 8
Q ss_pred CeEee
Q 017071 137 GVRQF 141 (378)
Q Consensus 137 g~~~~ 141 (378)
|+.+.
T Consensus 78 g~~ig 82 (114)
T 3h8q_A 78 KVHVG 82 (114)
T ss_dssp TEEEE
T ss_pred CEEEe
Confidence 85443
No 355
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.12 E-value=8.9e-06 Score=72.03 Aligned_cols=98 Identities=10% Similarity=0.148 Sum_probs=76.9
Q ss_pred CCcccCCCHHHHHHhhcc--CCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTV--ESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~--~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P 232 (378)
+.+..++ .+++++.+.. +++++|.|+++||++ ..+.+.+++ .+.+++.|..+ .+++++++|++.. +|
T Consensus 7 ~~v~~~~-~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~P 82 (287)
T 3qou_A 7 ENIVNIN-ESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRA---IP 82 (287)
T ss_dssp TTEEECC-TTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCS---SS
T ss_pred CccEECC-HHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCC---CC
Confidence 4566774 4777778765 789999999999987 456777776 55566888765 5688999999996 99
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
++++|+.+. ....|.|..+.+.+..|+....
T Consensus 83 t~~~~~~G~-~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 83 TVYLFQNGQ-PVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHHS
T ss_pred eEEEEECCE-EEEEeeCCCCHHHHHHHHHHHc
Confidence 999997652 4446889999999999998875
No 356
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.12 E-value=8.7e-06 Score=63.56 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=74.0
Q ss_pred cCCcccCCCHHHHHHhhc----cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCC
Q 017071 161 TLGTYSITTTDEAERILT----VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~----~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~ 230 (378)
+..+..+.+.+++++.+. .+++++|.|+++||++. .+.+..++....++.|..+ .+.+++++|++..
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~--- 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKA--- 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCE---
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCc---
Confidence 345677888888888774 47889999999999874 4455666644456777765 5678999999986
Q ss_pred CCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 231 ~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+|++++++.+. ....+.|. +.++|.+||...
T Consensus 100 ~Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDGQ-QVDKLVGA-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETTE-EEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEcCCe-EEEEEeCC-CHHHHHHHHHHH
Confidence 99999996543 44556777 889999999864
No 357
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.11 E-value=1.2e-05 Score=61.58 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=66.9
Q ss_pred hhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEEc-----cHHHHhhcCCCCCCCCCeEEEeecCCCCccc
Q 017071 176 ILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQTT-----SADVAEFFHIHPKSKRPALIFLHLEAGKATP 246 (378)
Q Consensus 176 ~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~~-----~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~ 246 (378)
....+++++|.|+++||.+. .+.+.+++ .+..++.|..+. +.+++++|++.. +|+++++..++.....
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~---~Pt~~~~~~~G~~~~~ 98 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANI---VPTTVFLDKEGNKFYV 98 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCS---SSEEEEECTTCCEEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcc---eeEEEEECCCCCEEEE
Confidence 34557789999999999874 34455555 444678877665 568999999986 9999999965545567
Q ss_pred cCCCCCHHHHHHHHHhcCC
Q 017071 247 FRHQFTRLAIANFVTHTKH 265 (378)
Q Consensus 247 y~g~~~~~~l~~fi~~~~~ 265 (378)
+.|..+.++|.+||+...-
T Consensus 99 ~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 99 HQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp EESCCCHHHHHHHHHHHCC
T ss_pred ecCCCCHHHHHHHHHHHhc
Confidence 8899999999999998653
No 358
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.10 E-value=7.5e-06 Score=62.14 Aligned_cols=97 Identities=11% Similarity=0.140 Sum_probs=69.7
Q ss_pred CCcccCCCHHHHHHhh-ccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCC-----ceeEEEEc--cHHHHhhcCCCCCC
Q 017071 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLHS-----DVNFYQTT--SADVAEFFHIHPKS 229 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~-~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~-----~~~f~~~~--~~~~~~~~~i~~~~ 229 (378)
..+..++ .+++++.+ ..+++++|.|+++||.+. .+.+.+++ .+.+ ++.|+.+. ...+++ ++..
T Consensus 7 ~~v~~l~-~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~~-- 81 (121)
T 2djj_A 7 GPVTVVV-AKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQG-- 81 (121)
T ss_dssp CSSEECC-TTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCSS--
T ss_pred CCeEEec-ccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccCc--
Confidence 3455664 46666664 567899999999999974 44566666 4444 67887653 223444 7775
Q ss_pred CCCeEEEeecCCCC-ccccCCCCCHHHHHHHHHhcC
Q 017071 230 KRPALIFLHLEAGK-ATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 230 ~~P~i~~~~~~~~~-~~~y~g~~~~~~l~~fi~~~~ 264 (378)
+|++++|+.+... ...|.|..+.++|.+||+++.
T Consensus 82 -~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 82 -FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp -SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred -CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 9999999887542 678999999999999998764
No 359
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.10 E-value=1.2e-05 Score=63.27 Aligned_cols=96 Identities=10% Similarity=0.191 Sum_probs=69.2
Q ss_pred cccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 164 ~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
+..+.+.+++++.+. ++++++|.|+++||++. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|++
T Consensus 5 l~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~---~Pt~ 81 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYD---PCTV 81 (142)
T ss_dssp SCBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCS---SCEE
T ss_pred HhccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCC---CCEE
Confidence 456778888886654 47899999999999974 45566666 45567888765 4667899999986 9999
Q ss_pred EEeecCCCCc--------cccCCCCC-HHHHHHHHHh
Q 017071 235 IFLHLEAGKA--------TPFRHQFT-RLAIANFVTH 262 (378)
Q Consensus 235 ~~~~~~~~~~--------~~y~g~~~-~~~l~~fi~~ 262 (378)
++|+++.... ....|..+ .+++.++|+.
T Consensus 82 ~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~ 118 (142)
T 1qgv_A 82 MFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 118 (142)
T ss_dssp EEEETTEEEEEECC------CCSCCSCHHHHHHHHHH
T ss_pred EEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHH
Confidence 9998653221 13445554 7888888875
No 360
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.10 E-value=1.1e-05 Score=62.74 Aligned_cols=98 Identities=10% Similarity=0.078 Sum_probs=71.9
Q ss_pred CCcccCCCHHHHHHhhccC---CeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEEccHHHHhhcCCCCCCCCCeEE
Q 017071 162 LGTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~---~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~ 235 (378)
..+..+ +.+++.+.+... ..++|.|+++||.+. .+.+.+++....++.|+.+...+..++|++.. +|+++
T Consensus 10 g~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~~---~Pt~~ 85 (135)
T 2dbc_A 10 GELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNC---LPTIF 85 (135)
T ss_dssp CSCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSCSSCCSSC---CSEEE
T ss_pred CceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCcccCCCCC---CCEEE
Confidence 346677 778888877543 578999999999874 45566777545678888775544458899986 99999
Q ss_pred EeecCCCCccccCCC-------CCHHHHHHHHHhcC
Q 017071 236 FLHLEAGKATPFRHQ-------FTRLAIANFVTHTK 264 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~-------~~~~~l~~fi~~~~ 264 (378)
+|+.+. ....+.|. ++.++|..||..+.
T Consensus 86 ~~~~G~-~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 86 VYKNGQ-IEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EESSSS-CSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEECCE-EEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 998654 34445554 37899999999864
No 361
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.08 E-value=1.2e-05 Score=68.47 Aligned_cols=96 Identities=13% Similarity=0.219 Sum_probs=73.7
Q ss_pred cccCCCHHHHHH-hhccCCeEEEEEEcCCCCcc---HHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAER-ILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~~-~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+..+ +.+++++ +++++++++|.|+++||.+. .+.+.+++ .+.+++.|..+ .+++++++|++.. +|+++
T Consensus 14 ~~~l-t~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~ 89 (222)
T 3dxb_A 14 IIHL-TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG---IPTLL 89 (222)
T ss_dssp CEEC-CTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCS---BSEEE
T ss_pred ceeC-CHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCc---CCEEE
Confidence 4445 4566665 57778899999999999874 44566666 55566777764 5668999999986 99999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
+++.+. ....+.|..+.+.|.+||+...
T Consensus 90 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 90 LFKNGE-VAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHHHS
T ss_pred EEECCe-EEEEeccccChHHHHHHHHhhc
Confidence 998653 4457889999999999999864
No 362
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.07 E-value=1.4e-05 Score=60.62 Aligned_cols=101 Identities=18% Similarity=0.217 Sum_probs=71.9
Q ss_pred CCcccCC-CHHHHHH-hhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCe
Q 017071 162 LGTYSIT-TTDEAER-ILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (378)
Q Consensus 162 ~~~~~i~-~~~~~~~-~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~ 233 (378)
+.+..+. +.+++++ +.+.+++++|.|+++||.+. .+.+.+++....++.|..+ .+.+++++|++.. +|+
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~---~Pt 79 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSS---IPA 79 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCC---CCE
Confidence 3466666 7788874 44567899999999999874 4456666633377888765 4678999999986 999
Q ss_pred EEEeecC---CCCccccCCCCCHHHHHHHHHhcCCC
Q 017071 234 LIFLHLE---AGKATPFRHQFTRLAIANFVTHTKHP 266 (378)
Q Consensus 234 i~~~~~~---~~~~~~y~g~~~~~~l~~fi~~~~~P 266 (378)
+++|+.+ +.....+.|.. .++|.+.+.++.-|
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred EEEEeCCCCcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 9999861 22334566764 56699999887644
No 363
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.06 E-value=2.3e-06 Score=66.83 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=69.5
Q ss_pred CcccCCCHHHHHHhhccCC--eEEEEEEcCCCCc---cHHHHHHHh-ccCC-ceeEEEE---ccHHHHhhcCCC------
Q 017071 163 GTYSITTTDEAERILTVES--KLVLGFLHDLEGM---ESEELAAAS-KLHS-DVNFYQT---TSADVAEFFHIH------ 226 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~--~~~v~f~~~~~~~---~~~~~~~~a-~~~~-~~~f~~~---~~~~~~~~~~i~------ 226 (378)
.+..+ +.+++++.+..++ +++|.|+++||.+ ..+.+.+++ .+.+ ++.|+.+ .+++++++|++.
T Consensus 8 ~v~~l-~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 8 YIKYF-NDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp CCEEC-CTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred eEEEc-cHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 35555 4577777776654 8899999999987 456677766 4553 6888865 567899999997
Q ss_pred CCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 227 ~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
. +|++++|+.+. ....+.|..+.+.|.+|+.++
T Consensus 87 ~---~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 87 Q---LPTLILFQGGK-EAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp C---SSEEEEESSSS-EEEEESCBCSSSCBCCCCCCH
T ss_pred C---CCEEEEEECCE-EEEEecCcCchHHHHHHHhcc
Confidence 5 89999997653 445677887777776666543
No 364
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=98.05 E-value=5.4e-06 Score=63.94 Aligned_cols=72 Identities=10% Similarity=0.208 Sum_probs=49.6
Q ss_pred hhcHHHHhcCCCcEEEEEecCCChhHHhh-HHHHHHHHHHhcCCcEEEEEeCcCc-------HHHHHHcCCCCCcEEEEE
Q 017071 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLF 134 (378)
Q Consensus 63 ~~~~~~~~~~~~~~lv~F~a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~~~~ 134 (378)
.+.+++.+..++ ++.|+++||++|++. .+.+.+.... .+.+..+|++.+ ..+.+.+|..++|++ |
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--f 99 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--Y 99 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--E
Confidence 345566665444 577999999999999 8877764311 255666666544 357888999999996 4
Q ss_pred eCCeEee
Q 017071 135 VAGVRQF 141 (378)
Q Consensus 135 ~~g~~~~ 141 (378)
.+|+.+.
T Consensus 100 i~g~~ig 106 (129)
T 3ctg_A 100 INGKHIG 106 (129)
T ss_dssp ETTEEEE
T ss_pred ECCEEEc
Confidence 5785443
No 365
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.03 E-value=1.1e-05 Score=68.12 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=73.2
Q ss_pred CcccCCCHHHHHHhhccC---CeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEEc--cHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTT--SADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~---~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~--~~~~~~~~~i~~~~~~P~i 234 (378)
.+..+.+.+++.+.+... ..++|.||++||++. .+.+..++....++.|+.+. ++.++++|++.. +|++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~~---~PTl 176 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDV---LPTL 176 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGGG---CSEE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCCC---CCEE
Confidence 466777888888887654 789999999999974 45677777555678888653 456788999986 9999
Q ss_pred EEeecCCCCccccCCCCC-------HHHHHHHHHhcC
Q 017071 235 IFLHLEAGKATPFRHQFT-------RLAIANFVTHTK 264 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~-------~~~l~~fi~~~~ 264 (378)
++|+.+. ....+.|..+ .++|..||..+.
T Consensus 177 ~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 177 LVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 9998653 3345555443 489999998764
No 366
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.02 E-value=2.2e-05 Score=58.49 Aligned_cols=96 Identities=13% Similarity=0.102 Sum_probs=68.8
Q ss_pred CCcccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE----ccHHHHhhcCCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT----TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~----~~~~~~~~~~i~~~~~~P 232 (378)
..+..+++ +++++.+. .+++++|.|+++||++. .+.+..++....++.|..+ .+.+++++|++.. +|
T Consensus 5 ~~v~~l~~-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~---~P 80 (111)
T 2pu9_C 5 GKVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRV---VP 80 (111)
T ss_dssp TSEEEECT-TTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSB---SS
T ss_pred CccEEech-HHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCe---ee
Confidence 34556654 66777776 46789999999999874 4456666644445777654 3578999999986 99
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++++++.+. ....+.|. +.++|.+||+..
T Consensus 81 t~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 81 TFKILKENS-VVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp EEEEESSSS-EEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEeCCc-EEEEEcCC-CHHHHHHHHHHh
Confidence 988887653 34456776 488999999763
No 367
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.01 E-value=7.4e-06 Score=63.04 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=74.0
Q ss_pred CCcccCCCHHHHHHhhcc----CCeEEEEEEcCCCCc---cHHHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCC
Q 017071 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~ 231 (378)
..+..+++.+++++.+.. +++++|.|+.+||.+ ..+.+.+++....++.|..+ .+.+++++|++.. +
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~ 90 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEA---M 90 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCS---S
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCc---c
Confidence 457778788888887764 778999999999986 56667776644446777765 4678999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
|++++++.+. ....+.| .+.++|.+||++..
T Consensus 91 Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 91 PTFLFIKDGA-EADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CCCCBCTTTT-CCBCCCT-TCTTTHHHHHHHHT
T ss_pred ceEEEEeCCe-EEEEEeC-CCHHHHHHHHHHHH
Confidence 9999996543 4456677 57788999998753
No 368
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.00 E-value=5.8e-06 Score=64.01 Aligned_cols=99 Identities=9% Similarity=0.144 Sum_probs=70.7
Q ss_pred CcccCCCHHHHHHhhc-cCCeEEEEEEcCCCCcc---HHHHHHHh-ccC--CceeEEEE---ccHHHHhhcCCCCCCCCC
Q 017071 163 GTYSITTTDEAERILT-VESKLVLGFLHDLEGME---SEELAAAS-KLH--SDVNFYQT---TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~-~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~--~~~~f~~~---~~~~~~~~~~i~~~~~~P 232 (378)
.+..++ .++++..+. .+++++|.|+++||.+. .+.+.+++ .+. .++.|+.+ .+..++++|++.. +|
T Consensus 8 ~v~~l~-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~P 83 (133)
T 2dj3_A 8 PVKVVV-GKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEG---FP 83 (133)
T ss_dssp SSEECC-TTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSS---SS
T ss_pred ceEEEc-CCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCc---CC
Confidence 455554 355655554 47899999999999974 44566665 443 46777765 3456778899986 99
Q ss_pred eEEEeecCCC-CccccC-CCCCHHHHHHHHHhcCC
Q 017071 233 ALIFLHLEAG-KATPFR-HQFTRLAIANFVTHTKH 265 (378)
Q Consensus 233 ~i~~~~~~~~-~~~~y~-g~~~~~~l~~fi~~~~~ 265 (378)
++++|+.+.. ....|. |..+.++|.+||+.+.-
T Consensus 84 t~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 84 TIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp EEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred EEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 9999987643 334677 55889999999998754
No 369
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.00 E-value=1.9e-05 Score=58.97 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=49.3
Q ss_pred hcHHHHhcCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHH----HHHHcCCCCCcEEEEE
Q 017071 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLF 134 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~ 134 (378)
+.+++.+..++ ++ .|+. +||++|++..+.|.+. ++.+..+|+++++. +.+..|..++|++ |
T Consensus 6 ~~~~~~i~~~~-vv-vy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--f 75 (109)
T 1wik_A 6 SGLKVLTNKAS-VM-LFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL--Y 75 (109)
T ss_dssp CCHHHHHTTSS-EE-EEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHhccCC-EE-EEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--E
Confidence 45677776555 44 4666 9999999999988764 57789999988765 4455688999985 4
Q ss_pred eCCeEe
Q 017071 135 VAGVRQ 140 (378)
Q Consensus 135 ~~g~~~ 140 (378)
.+|+.+
T Consensus 76 i~g~~i 81 (109)
T 1wik_A 76 VRGDLV 81 (109)
T ss_dssp CSSSEE
T ss_pred ECCEEE
Confidence 577543
No 370
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.97 E-value=3.2e-05 Score=60.08 Aligned_cols=96 Identities=14% Similarity=0.010 Sum_probs=71.2
Q ss_pred CcccCCCHHHHHHhhccCCeEEEEEEcCCCCccH---HHHHHHhccCCceeEEEE------------ccHHHHhhcCCCC
Q 017071 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT------------TSADVAEFFHIHP 227 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~------------~~~~~~~~~~i~~ 227 (378)
.+..+ +.+++++.++. +++|.|+++||++.. +.+.++++... +.|..+ .+.+++++|++..
T Consensus 17 ~v~~l-~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~ 92 (135)
T 3emx_A 17 RLIYI-TPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVEG 92 (135)
T ss_dssp EEEEC-CHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCCS
T ss_pred ceeec-CHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCce
Confidence 45566 67888888876 899999999999854 45566664333 555533 3567889999986
Q ss_pred CCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcCCC
Q 017071 228 KSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHP 266 (378)
Q Consensus 228 ~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P 266 (378)
+|++++++.+ .....+.|..+.+.+..|++...-+
T Consensus 93 ---~Pt~~~~~~G-~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 93 ---TPTLVFYKEG-RIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp ---SSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHC--
T ss_pred ---eCeEEEEcCC-EEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 9999999955 3556778999999999999986543
No 371
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.96 E-value=2.5e-05 Score=60.51 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=69.6
Q ss_pred CcccCCCHHHHHHhhccC--CeEEEEEEcCCCCccH---HHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAERILTVE--SKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~--~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i 234 (378)
.+..+++.+++++.++.. ++++|.|+++||++.. +.+.+++... ++.|..+ .+.+++++|++.. +|++
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v~~---~Pt~ 96 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNIKA---LPTF 96 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCCCC---CCEE
Confidence 467788888888888764 5899999999999754 4444444222 4566544 5678999999986 9999
Q ss_pred EEee--cCCC-CccccCCCCCHHHHHHHHHhc
Q 017071 235 IFLH--LEAG-KATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 235 ~~~~--~~~~-~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++|+ ++.+ ....+.|. +.++|.+||+..
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 9996 4421 33456677 889999999865
No 372
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.89 E-value=4.9e-05 Score=65.28 Aligned_cols=98 Identities=12% Similarity=0.136 Sum_probs=72.4
Q ss_pred CcccCCCHHHHHHhhcc---CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEEcc--HHHHhhcCCCCCCCCCeE
Q 017071 163 GTYSITTTDEAERILTV---ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTS--ADVAEFFHIHPKSKRPAL 234 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~---~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~--~~~~~~~~i~~~~~~P~i 234 (378)
.+..|.+.+++.+.+.. +..++|.||++||++. .+.+..+|.....+.|+.+.. ..++++|++.. +||+
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~~---~PTl 189 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDV---LPTL 189 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTTT---CSEE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCCC---CCEE
Confidence 46778788888888853 6789999999999984 456777775555688887643 34788899986 9999
Q ss_pred EEeecCCCCccccCC-------CCCHHHHHHHHHhcC
Q 017071 235 IFLHLEAGKATPFRH-------QFTRLAIANFVTHTK 264 (378)
Q Consensus 235 ~~~~~~~~~~~~y~g-------~~~~~~l~~fi~~~~ 264 (378)
++|+.+. ....+.| .++.+.|..||..+.
T Consensus 190 l~~~~G~-~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 190 LVYKGGE-LLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEETTE-EEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 9998653 2222322 256789999999875
No 373
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.88 E-value=4.2e-05 Score=58.22 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=69.0
Q ss_pred cCCcccCCCHHHHHHhhc--cCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE----ccHHHHhhcCCCCCCCC
Q 017071 161 TLGTYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT----TSADVAEFFHIHPKSKR 231 (378)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~----~~~~~~~~~~i~~~~~~ 231 (378)
...+..+++ +++.+.+. .+++++|.|+++||++. .+.+.++++...++.|..+ .+.+++++|++.. +
T Consensus 17 ~~~v~~l~~-~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~---~ 92 (124)
T 1faa_A 17 VGKVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRV---V 92 (124)
T ss_dssp TTSEEEECT-TTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSS---S
T ss_pred CCceEEecc-hhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCe---e
Confidence 345666644 56666665 57789999999999874 4456666644445777654 3578999999986 9
Q ss_pred CeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
|++++++++. ....+.|.. .++|.+||++.
T Consensus 93 Pt~~~~~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 93 PTFKILKENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp SEEEEEETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eEEEEEeCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 9999987653 344567764 88999999764
No 374
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.85 E-value=0.00012 Score=61.04 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=66.1
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH-HHHHHHhc--CCcEEEEEeCcC---------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLK--GEADLVMVDAYL--------------------------------- 115 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~-~~~~~~~~--~~~~~~~vd~~~--------------------------------- 115 (378)
..++++|.|+...||+|+++.+.+ ..+.+.|. +++.|...+..-
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~ 107 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEK 107 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHh
Confidence 457889999999999999999986 56767773 467777665310
Q ss_pred --------------------------------------------cHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHH
Q 017071 116 --------------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDV 151 (378)
Q Consensus 116 --------------------------------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~ 151 (378)
+...++++||.|+||+++ +|+. +.|..+.+.
T Consensus 108 ~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~ 182 (202)
T 3gha_A 108 QPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV---IKNFADYDE 182 (202)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHH
T ss_pred CccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHH
Confidence 012356789999999988 8853 679999999
Q ss_pred HHHHHHHHhcCC
Q 017071 152 ISAWVREKMTLG 163 (378)
Q Consensus 152 l~~~i~~~~~~~ 163 (378)
|.+.|.+.+...
T Consensus 183 l~~~i~~~~~~~ 194 (202)
T 3gha_A 183 IKETIEKELKGK 194 (202)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999998877544
No 375
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.04 E-value=2.4e-06 Score=62.98 Aligned_cols=95 Identities=12% Similarity=0.200 Sum_probs=65.6
Q ss_pred cccCCCHHHHH-HhhccCCeEEEEEEcCCCCccH---HHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEE
Q 017071 164 TYSITTTDEAE-RILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 164 ~~~i~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~ 235 (378)
+..+++ +++. ..++.+++++|.|+++||.+.. +.+.+++ .+.+++.|..+ .+.+++++|++.. +|+++
T Consensus 3 v~~l~~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTD-ENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRS---IPTLL 78 (106)
Confidence 344443 3444 4446678899999999998643 3445555 33345666543 5678999999986 89999
Q ss_pred EeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+++.+ .....+.|..+.+++.+||++.
T Consensus 79 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNG-QVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 99654 3555778888889999998753
No 376
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.75 E-value=0.00012 Score=62.31 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=66.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH-HHHHHHh--cCCcEEEEEeCc----------------------------------
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKML--KGEADLVMVDAY---------------------------------- 114 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~-~~~~~~~--~~~~~~~~vd~~---------------------------------- 114 (378)
..+++++.|....||+|+++.|.+ .++.++| .+++.+...+..
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~ 117 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDS 117 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCHh
Confidence 356789999999999999999964 7787777 346666654420
Q ss_pred -------C---------------------------------cHHHHHH-cCCCCCcEEEEEe-CCeEe-----eeeeCCC
Q 017071 115 -------L---------------------------------EKDLAKE-YNILAYPTLYLFV-AGVRQ-----FQFFGER 147 (378)
Q Consensus 115 -------~---------------------------------~~~~~~~-~~v~~~Pt~~~~~-~g~~~-----~~~~g~~ 147 (378)
. +...+++ +||+|+||+++.. +|+.+ ....|..
T Consensus 118 ~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~ 197 (226)
T 3f4s_A 118 WNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYK 197 (226)
T ss_dssp SCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCC
T ss_pred hcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCccccccc
Confidence 0 0124567 9999999999976 77532 1234555
Q ss_pred CHHHHHHHHHHHhcCCcc
Q 017071 148 TRDVISAWVREKMTLGTY 165 (378)
Q Consensus 148 ~~~~l~~~i~~~~~~~~~ 165 (378)
+.+.|.+.|.+.+.....
T Consensus 198 ~~e~l~~~I~~~l~~~~~ 215 (226)
T 3f4s_A 198 ELKYFTNVIDKLYGKAIV 215 (226)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCc
Confidence 599999999988754433
No 377
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.73 E-value=0.00013 Score=55.61 Aligned_cols=93 Identities=10% Similarity=0.068 Sum_probs=67.9
Q ss_pred ccCCCHHHHHHhhcc--CCeEEEEEEcC-------CCCcc---HHHHHHHh-ccCCceeEEEE----------ccHHHHh
Q 017071 165 YSITTTDEAERILTV--ESKLVLGFLHD-------LEGME---SEELAAAS-KLHSDVNFYQT----------TSADVAE 221 (378)
Q Consensus 165 ~~i~~~~~~~~~~~~--~~~~~v~f~~~-------~~~~~---~~~~~~~a-~~~~~~~f~~~----------~~~~~~~ 221 (378)
..+.+.+++++.+.. +++++|.|+++ ||++. .+.+.+++ .+.+++.|..+ .+.++++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 345678888888766 78999999999 99874 44566666 44457777754 3567899
Q ss_pred hcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 222 FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 222 ~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+|++.. +|++++|+.+ .+..-+.| .+.+.|.+||.+
T Consensus 87 ~~~i~~---~Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 87 NLKVTA---VPTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHCCCS---SSEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred HCCCCe---eCEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 999987 9999999873 23333444 467889999875
No 378
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.69 E-value=9.8e-05 Score=56.94 Aligned_cols=91 Identities=9% Similarity=0.134 Sum_probs=63.0
Q ss_pred CHHHHHHhh----ccCCeEEEEEEcCCCCccH---HHHH--HHh-ccCCceeEEEE------ccHHHHhhcCC---CCCC
Q 017071 169 TTDEAERIL----TVESKLVLGFLHDLEGMES---EELA--AAS-KLHSDVNFYQT------TSADVAEFFHI---HPKS 229 (378)
Q Consensus 169 ~~~~~~~~~----~~~~~~~v~f~~~~~~~~~---~~~~--~~a-~~~~~~~f~~~------~~~~~~~~~~i---~~~~ 229 (378)
+.+++++.+ ..+++++|.|+++||++.. +.+. .++ .+.+++.+..+ .+.+++++|++ ..
T Consensus 14 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~-- 91 (133)
T 3fk8_A 14 AWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDG-- 91 (133)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGC--
T ss_pred hHhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCc--
Confidence 444454444 4588999999999998743 3444 444 33355666543 46789999999 76
Q ss_pred CCCeEEEeecCCCCccccCC-------CCCHHHHHHHHHh
Q 017071 230 KRPALIFLHLEAGKATPFRH-------QFTRLAIANFVTH 262 (378)
Q Consensus 230 ~~P~i~~~~~~~~~~~~y~g-------~~~~~~l~~fi~~ 262 (378)
+|+++++..++.....+.| .++.+++.+|++.
T Consensus 92 -~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 92 -IPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp -SSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred -cceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 9999999554445555566 5688999999875
No 379
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.60 E-value=0.00024 Score=49.73 Aligned_cols=75 Identities=11% Similarity=0.091 Sum_probs=56.9
Q ss_pred CeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCH
Q 017071 181 SKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR 253 (378)
Q Consensus 181 ~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~ 253 (378)
.+.++.|+++||.+ ..+.+.+++ .+.+++.|..+ .+++++++|++.. .|++++ ++ +. .+.|..+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~~--~G--~~-~~~G~~~~ 74 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMA---VPTIVI--NG--DV-EFIGAPTK 74 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCC---SSEEEE--TT--EE-ECCSSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcc---cCEEEE--CC--EE-eeecCCCH
Confidence 35788899999986 455666666 45557777755 4667899999986 899998 33 33 78888888
Q ss_pred HHHHHHHHhc
Q 017071 254 LAIANFVTHT 263 (378)
Q Consensus 254 ~~l~~fi~~~ 263 (378)
++|.+||++.
T Consensus 75 ~~l~~~l~~~ 84 (85)
T 1fo5_A 75 EALVEAIKKR 84 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 380
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.00013 Score=56.00 Aligned_cols=86 Identities=8% Similarity=0.105 Sum_probs=61.3
Q ss_pred ccCCeEEEEEEcCCCCccHHH---H---HHHhc-cCCceeEEEE-----ccHHHHhhcCCCCCCCCCeEEEeecCCCCcc
Q 017071 178 TVESKLVLGFLHDLEGMESEE---L---AAASK-LHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLEAGKAT 245 (378)
Q Consensus 178 ~~~~~~~v~f~~~~~~~~~~~---~---~~~a~-~~~~~~f~~~-----~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~ 245 (378)
..+++++|.|+++||.+.... + ..++. ...++.+..+ .+.+++++|++.. +|+++++..++....
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~---~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHA---YPTLLFINSSGEVVY 101 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCS---SCEEEEECTTSCEEE
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCC---CCEEEEECCCCcEEE
Confidence 357889999999999975443 2 22222 2234555544 2567999999986 999999955444555
Q ss_pred ccCCCCCHHHHHHHHHhcCCC
Q 017071 246 PFRHQFTRLAIANFVTHTKHP 266 (378)
Q Consensus 246 ~y~g~~~~~~l~~fi~~~~~P 266 (378)
.+.|..+.++|.+||+...-|
T Consensus 102 ~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 102 RLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp EEESCCCHHHHHHHHHHHHSC
T ss_pred EecCCCCHHHHHHHHHHHHHh
Confidence 778998999999999976433
No 381
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.49 E-value=3.6e-05 Score=72.06 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=70.1
Q ss_pred CcccCCCHHHHHHhhccC--CeEEEEEEcCCCCc---cHHHHHHHh-ccC---C-----ceeEEEE---ccHHHHhhcCC
Q 017071 163 GTYSITTTDEAERILTVE--SKLVLGFLHDLEGM---ESEELAAAS-KLH---S-----DVNFYQT---TSADVAEFFHI 225 (378)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~--~~~~v~f~~~~~~~---~~~~~~~~a-~~~---~-----~~~f~~~---~~~~~~~~~~i 225 (378)
.+..++ .+++++.+..+ ++++|.|+++||++ ..+.+.+++ .+. + ++.|+.+ .+.+++++|+|
T Consensus 24 ~V~~Lt-~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V 102 (470)
T 3qcp_A 24 SVVDLS-GDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI 102 (470)
T ss_dssp TEEECS-CSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC
T ss_pred CcEECC-HHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC
Confidence 455553 46677777543 68999999999997 445677766 343 1 4777765 56789999999
Q ss_pred CCCCCCCeEEEeecCC-CCccccCCCCCHHHHHHHHHhcC
Q 017071 226 HPKSKRPALIFLHLEA-GKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~-~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
.. +|++++|++++ .....|.|.++.+.| .|+.++.
T Consensus 103 ~~---~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l 138 (470)
T 3qcp_A 103 NF---VPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHL 138 (470)
T ss_dssp CS---SCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTC
T ss_pred Cc---cCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhc
Confidence 87 99999998654 457788998777766 6666553
No 382
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.49 E-value=0.00027 Score=49.49 Aligned_cols=73 Identities=11% Similarity=0.075 Sum_probs=55.5
Q ss_pred EEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHH
Q 017071 183 LVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLA 255 (378)
Q Consensus 183 ~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~ 255 (378)
.++.|+++||++ ..+.+.+++ .+.+++.|..+ .+.+++++|++.. .|++++ ++ +. .+.|..+.++
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~~--~G--~~-~~~G~~~~~~ 75 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMA---VPAIAI--NG--VV-RFVGAPSREE 75 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSC---SSEEEE--TT--TE-EEECSSCCHH
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCcee---eCEEEE--CC--EE-EEccCCCHHH
Confidence 577899999986 455566665 45557777765 5678999999986 999998 33 33 7788888899
Q ss_pred HHHHHHhc
Q 017071 256 IANFVTHT 263 (378)
Q Consensus 256 l~~fi~~~ 263 (378)
|.+||++.
T Consensus 76 l~~~l~~~ 83 (85)
T 1nho_A 76 LFEAINDE 83 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 383
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.41 E-value=0.00081 Score=45.99 Aligned_cols=69 Identities=12% Similarity=0.046 Sum_probs=51.7
Q ss_pred EEEEEcCCCCccH---HHHHHHh-ccCCceeEEEEccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCC-CHHHHHH
Q 017071 184 VLGFLHDLEGMES---EELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIAN 258 (378)
Q Consensus 184 ~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~-~~~~l~~ 258 (378)
.|.|+++||++.. +.+.+++ .+..++.+..+.+.+++++|++.. .|++++ ++ +.... |.. +.++|.+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~v~~---~Pt~~~--~G--~~~~~-G~~~~~~~l~~ 74 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILEAGLTA---LPGLAV--DG--ELKIM-GRVASKEEIKK 74 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHTCSS---SSCEEE--TT--EEEEC-SSCCCHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEecCHHHHHHCCCCc---CCEEEE--CC--EEEEc-CCCCCHHHHHH
Confidence 4678999999743 4455555 455678888777899999999986 999998 32 43333 887 8899988
Q ss_pred HH
Q 017071 259 FV 260 (378)
Q Consensus 259 fi 260 (378)
|+
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 86
No 384
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.40 E-value=0.0012 Score=53.76 Aligned_cols=86 Identities=10% Similarity=0.230 Sum_probs=61.7
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHh-cC-CcE-EEEEeCc----------------------CcHHHHHHcC
Q 017071 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKML-KG-EAD-LVMVDAY----------------------LEKDLAKEYN 124 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~-~~~p~~~~~~~~~-~~-~~~-~~~vd~~----------------------~~~~~~~~~~ 124 (378)
+++++++.|| +.||+.|. .+.+.|.+.+.++ +. ++. ++.|.++ .+.+++++||
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yG 121 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMN 121 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhC
Confidence 5677777665 67999999 9999999999888 55 663 7766654 3456888998
Q ss_pred CC------C-----CcEEEEEeCCeEeeeeeCC-------------CCHHHHHHHHH
Q 017071 125 IL------A-----YPTLYLFVAGVRQFQFFGE-------------RTRDVISAWVR 157 (378)
Q Consensus 125 v~------~-----~Pt~~~~~~g~~~~~~~g~-------------~~~~~l~~~i~ 157 (378)
+. | ..+++++++|++...+... .+.+++.++|+
T Consensus 122 v~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~ 178 (182)
T 1xiy_A 122 MLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLK 178 (182)
T ss_dssp CEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHH
T ss_pred CceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHH
Confidence 73 2 5677888999776655422 45677766664
No 385
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.39 E-value=0.00015 Score=53.57 Aligned_cols=71 Identities=13% Similarity=-0.057 Sum_probs=50.1
Q ss_pred CeEEEEEEcCCCCccHH---HHHHHhccCCceeEE-EE------ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCC
Q 017071 181 SKLVLGFLHDLEGMESE---ELAAASKLHSDVNFY-QT------TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ 250 (378)
Q Consensus 181 ~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~-~~------~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~ 250 (378)
++.+|.|+++||++... .|.+++. .+.+. .. .+.+++++|++.. +|++++ .+ . .|.|.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~---~~~~v~~~~~~~~~~~~~l~~~~~V~~---~PT~~i--~G--~--~~~G~ 80 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFD---QVPYVECSPNGPGTPQAQECTEAGITS---YPTWII--NG--R--TYTGV 80 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGG---GSCEEESCTTCTTSCCCHHHHHTTCCS---SSEEEE--TT--E--EEESC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHH---hCCEEEEecccccchhHHHHHHcCCeE---eCEEEE--CC--E--EecCC
Confidence 34578899999998544 4444442 22232 22 3578999999997 999876 33 3 48899
Q ss_pred CCHHHHHHHHHhc
Q 017071 251 FTRLAIANFVTHT 263 (378)
Q Consensus 251 ~~~~~l~~fi~~~ 263 (378)
.+.++|.+|+...
T Consensus 81 ~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 81 RSLEALAVASGYP 93 (106)
T ss_dssp CCHHHHHHHHTCC
T ss_pred CCHHHHHHHhCCc
Confidence 9999999998644
No 386
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.00038 Score=53.18 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=45.2
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcH-----HHHHHcCCCCCcEEEEEeCCe
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-----DLAKEYNILAYPTLYLFVAGV 138 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~-----~~~~~~~v~~~Pt~~~~~~g~ 138 (378)
++|++++..++ ++.|..+||++|++....|.+.. .+.-.+..+.||.+.++ .+.+..|...+|++++ +|+
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~-~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI--~G~ 79 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEY-QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV--NGV 79 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHE-EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--TTE
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhc-ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE--CCE
Confidence 45777775555 67789999999999999888731 01113444444443332 2334458899999855 774
Q ss_pred E
Q 017071 139 R 139 (378)
Q Consensus 139 ~ 139 (378)
.
T Consensus 80 ~ 80 (127)
T 3l4n_A 80 S 80 (127)
T ss_dssp E
T ss_pred E
Confidence 3
No 387
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.18 E-value=0.00039 Score=53.71 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=46.6
Q ss_pred hcHHHHhcCCCcEEEEEec----CCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHH----HcCCCCCcEEEEEe
Q 017071 64 KNFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK----EYNILAYPTLYLFV 135 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a----~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~----~~~v~~~Pt~~~~~ 135 (378)
+.+++.+..+ .++|+.++ +||++|++....|.+. ++.|..+|+++++++.+ ..|...+|.++ -
T Consensus 26 ~~v~~~i~~~-~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~Vf--I 96 (135)
T 2wci_A 26 EKIQRQIAEN-PILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTFPQLW--V 96 (135)
T ss_dssp HHHHHHHHHC-SEEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--E
T ss_pred HHHHHHhccC-CEEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCcCEEE--E
Confidence 4455566444 45555544 8999999998888654 57788889887765443 45888899864 4
Q ss_pred CCeEe
Q 017071 136 AGVRQ 140 (378)
Q Consensus 136 ~g~~~ 140 (378)
+|+.+
T Consensus 97 ~G~~i 101 (135)
T 2wci_A 97 DGELV 101 (135)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78544
No 388
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.09 E-value=0.0023 Score=48.92 Aligned_cols=81 Identities=12% Similarity=0.152 Sum_probs=58.4
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHhccCCceeEEEEc-------------------------cHHHHhhcCCCCCCC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQTT-------------------------SADVAEFFHIHPKSK 230 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~~-------------------------~~~~~~~~~i~~~~~ 230 (378)
.+++++|.|+++||.+... .+.+++....++.|..+. +.++++.|++..
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~--- 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW--- 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS---
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC---
Confidence 3568889999999987543 444444222366666442 467889999986
Q ss_pred CCeEEEeecCCCCccccC---CCCCHHHHHHHHHhc
Q 017071 231 RPALIFLHLEAGKATPFR---HQFTRLAIANFVTHT 263 (378)
Q Consensus 231 ~P~i~~~~~~~~~~~~y~---g~~~~~~l~~fi~~~ 263 (378)
.|+++++..++... .+. |..+.++|.++|++.
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 89999997654444 778 888999999999864
No 389
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.08 E-value=0.001 Score=52.95 Aligned_cols=83 Identities=7% Similarity=0.114 Sum_probs=58.5
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccC-C----------------------------c---eeEEEEccHHHHhh
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLH-S----------------------------D---VNFYQTTSADVAEF 222 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~-~----------------------------~---~~f~~~~~~~~~~~ 222 (378)
.+++++|.|+++||.+.... +.+++ ++. . + +.+....+.++++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 45788999999999875433 34433 210 1 1 23344456788999
Q ss_pred cCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 223 ~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
|++.. +|+++++..++.....+.|..+.++|.++|+...
T Consensus 117 ~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 117 LNISV---YPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTCCS---SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred cCCCc---cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 99986 8999999665545566779889999999998753
No 390
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=97.07 E-value=0.0013 Score=48.84 Aligned_cols=66 Identities=15% Similarity=0.342 Sum_probs=45.7
Q ss_pred cHHHHhcCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHHH----HcCCCCCcEEEEEe
Q 017071 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK----EYNILAYPTLYLFV 135 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~----~~~v~~~Pt~~~~~ 135 (378)
.+++.+.+++ +|.|.. +||++|++....|.+. ++.+..+|++.+++..+ ..|...+|.+++
T Consensus 8 ~v~~~i~~~~--Vvlf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi-- 77 (111)
T 3zyw_A 8 RLKKLTHAAP--CMLFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYV-- 77 (111)
T ss_dssp HHHHHHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEE--
T ss_pred HHHHHHhcCC--EEEEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEE--
Confidence 3455665544 344677 9999999999888753 56677788887765543 347888999754
Q ss_pred CCeEe
Q 017071 136 AGVRQ 140 (378)
Q Consensus 136 ~g~~~ 140 (378)
+|+.+
T Consensus 78 ~g~~i 82 (111)
T 3zyw_A 78 SGELI 82 (111)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 77433
No 391
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.06 E-value=0.0015 Score=52.71 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=56.3
Q ss_pred ccCCeEEEEEEcCCCCccHHH------HHHHhc-cCCceeEEEEc---cHHH--------------------------Hh
Q 017071 178 TVESKLVLGFLHDLEGMESEE------LAAASK-LHSDVNFYQTT---SADV--------------------------AE 221 (378)
Q Consensus 178 ~~~~~~~v~f~~~~~~~~~~~------~~~~a~-~~~~~~f~~~~---~~~~--------------------------~~ 221 (378)
..+++++|.|+++||++.... ...+.+ +..++.+..+. +.++ ++
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRV 124 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHH
Confidence 557899999999999986443 122222 22245554331 1112 68
Q ss_pred hcCCCCCCCCCeEEEeecCCCCccccCCCCC-HHHHHHHHHhc
Q 017071 222 FFHIHPKSKRPALIFLHLEAGKATPFRHQFT-RLAIANFVTHT 263 (378)
Q Consensus 222 ~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~-~~~l~~fi~~~ 263 (378)
+|++.. +|+++++..++.....+.|..+ .+++.+||++.
T Consensus 125 ~~~v~~---~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 125 KFGANA---QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp HHSCCC---SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred HcCCCC---cceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 899986 9999999665555666778887 89999998763
No 392
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=97.04 E-value=0.0056 Score=50.00 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=29.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH-HHHHHHhcC--CcEEEE
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKG--EADLVM 110 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~-~~~~~~~~~--~~~~~~ 110 (378)
..++.++.|+...||+|..+.+.+ .++.++|.+ ++.+..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~ 51 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQF 51 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 457789999999999999999998 567777742 455544
No 393
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=96.99 E-value=0.0033 Score=51.27 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=31.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHh-cCCcEEEEE
Q 017071 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KGEADLVMV 111 (378)
Q Consensus 72 ~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~~v 111 (378)
..++++|.|.-..||+|+++.+.+.++.+++ .+++.++--
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r 53 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIR 53 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 4677899999999999999999988876665 556666543
No 394
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.04 E-value=0.00011 Score=56.34 Aligned_cols=90 Identities=9% Similarity=0.089 Sum_probs=61.2
Q ss_pred HHHHHhhccCCeEEEEEEcCCCCccHH---HH---HHHhc-cCCceeEEEE-----ccHHHHhhcCCCCCCCCCeEEEee
Q 017071 171 DEAERILTVESKLVLGFLHDLEGMESE---EL---AAASK-LHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLH 238 (378)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~---~~~a~-~~~~~~f~~~-----~~~~~~~~~~i~~~~~~P~i~~~~ 238 (378)
+.+......+++++|.|+++||.+... .+ ..+++ +..++.+..+ .+.+++++|++.. +|+++++.
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~---~Pt~~~~d 86 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPG---TPTFVFLV 86 (130)
Confidence 344444556778899999999987543 33 34443 3334555533 3367899999986 99999995
Q ss_pred cC-CCC--ccccCCCCCHHHHHHHHHhc
Q 017071 239 LE-AGK--ATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 239 ~~-~~~--~~~y~g~~~~~~l~~fi~~~ 263 (378)
+. +.. ...+.|..+.+.|.+||+..
T Consensus 87 ~~~G~~~~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 87 PKAGAWEEVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 33 223 45678888888999998764
No 395
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.98 E-value=0.0018 Score=45.69 Aligned_cols=56 Identities=7% Similarity=0.181 Sum_probs=41.3
Q ss_pred EEEEecC----CChhHHhhHHHHHHHHHHhcCCcEEEEEeCc-----CcH----HHHHHcCCC-----CCcEEEEEeCCe
Q 017071 77 MVMFYAN----WCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LEK----DLAKEYNIL-----AYPTLYLFVAGV 138 (378)
Q Consensus 77 lv~F~a~----wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-----~~~----~~~~~~~v~-----~~Pt~~~~~~g~ 138 (378)
++.|+.+ ||++|++....|++. ++.+-.+|++ .++ ++.+..|.. ++|++++ .+|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCE
Confidence 4568899 999999998888763 5667778877 553 356677888 8998754 4664
Q ss_pred E
Q 017071 139 R 139 (378)
Q Consensus 139 ~ 139 (378)
.
T Consensus 75 ~ 75 (87)
T 1aba_A 75 H 75 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 396
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.97 E-value=0.0031 Score=48.08 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=57.7
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHhccCCceeEEEEc--------------------------cHHHHhhcCCCCCC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQTT--------------------------SADVAEFFHIHPKS 229 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~~--------------------------~~~~~~~~~i~~~~ 229 (378)
.+++++|.|+.+||.+... .+.+++....++.|..+. +.++++.|++..
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-- 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ-- 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS--
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC--
Confidence 3567888999999987443 344444222366665432 356788999986
Q ss_pred CCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 230 ~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
.|+++++..++... .+.|..+.++|.++|++.
T Consensus 102 -~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 102 -QPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp -SSEEEEECTTCCEE-EEESCCCHHHHHHHHHHH
T ss_pred -CceEEEECCCCCEE-EEecCCCHHHHHHHHHHH
Confidence 89999997655444 788998999999999764
No 397
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.96 E-value=0.0025 Score=49.45 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=58.1
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-ccCCceeEEEEc------------------------------cHHHHhhcC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQTT------------------------------SADVAEFFH 224 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~~------------------------------~~~~~~~~~ 224 (378)
.+++++|.|+.+||.+... .+.+++ .+.+++.|..+. +.++++.|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 4578899999999987443 344444 344446665442 347889999
Q ss_pred CCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.. .|+++++..++.....+.|..+.+++.++|+..
T Consensus 108 v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 108 NEY---VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp CCC---SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHH
T ss_pred CCC---CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHH
Confidence 986 899999966554555677888888899988753
No 398
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.93 E-value=0.0012 Score=49.29 Aligned_cols=79 Identities=5% Similarity=-0.092 Sum_probs=55.0
Q ss_pred CCeEEEEEEcCCCCccHHHHHHHh-ccCCc-----eeEEEE---c--cHHHHhhcCCCCCCCCCeEEEeecCCCCccccC
Q 017071 180 ESKLVLGFLHDLEGMESEELAAAS-KLHSD-----VNFYQT---T--SADVAEFFHIHPKSKRPALIFLHLEAGKATPFR 248 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~-----~~f~~~---~--~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~ 248 (378)
....+|.|+++||.+....=..++ .+... +.+..+ . ..+++.++++.. .||+++|+++. ......
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g---~PT~i~f~~G~-ev~Ri~ 93 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTF---TPTFVLMAGDV-ESGRLE 93 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCS---SSEEEEEETTE-EEEEEE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCC---CCEEEEEECCE-EEeeec
Confidence 467899999999998654433333 22211 334332 2 246888899886 89999999653 556788
Q ss_pred CCCCHHHHHHHHHh
Q 017071 249 HQFTRLAIANFVTH 262 (378)
Q Consensus 249 g~~~~~~l~~fi~~ 262 (378)
|....+.+..|++.
T Consensus 94 G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 94 GYPGEDFFWPMLAR 107 (116)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 99999999999976
No 399
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.89 E-value=0.0024 Score=47.29 Aligned_cols=66 Identities=17% Similarity=0.313 Sum_probs=44.7
Q ss_pred cHHHHhcCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcHHHH----HHcCCCCCcEEEEEe
Q 017071 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA----KEYNILAYPTLYLFV 135 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~ 135 (378)
.+++.+.+++ ++| |.. |||++|++....|.+. ++.+-.+|++++++.. +..|...+|.+++
T Consensus 10 ~v~~~i~~~~-Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi-- 79 (109)
T 3ipz_A 10 TLEKLVNSEK-VVL-FMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTFPQLYI-- 79 (109)
T ss_dssp HHHHHHTSSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEE--
T ss_pred HHHHHHccCC-EEE-EEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEE--
Confidence 3455665554 444 454 5999999999888764 5667778887765543 3458889997644
Q ss_pred CCeEe
Q 017071 136 AGVRQ 140 (378)
Q Consensus 136 ~g~~~ 140 (378)
+|+.+
T Consensus 80 ~g~~i 84 (109)
T 3ipz_A 80 GGEFF 84 (109)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 77543
No 400
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.87 E-value=0.0026 Score=50.27 Aligned_cols=81 Identities=11% Similarity=0.081 Sum_probs=56.4
Q ss_pred ccCCeEEEEEE-cCCCCccHHHHH------HHhcc-CCceeEEEEc--------------cHHHHhhcCCCCCCCCCeEE
Q 017071 178 TVESKLVLGFL-HDLEGMESEELA------AASKL-HSDVNFYQTT--------------SADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 178 ~~~~~~~v~f~-~~~~~~~~~~~~------~~a~~-~~~~~f~~~~--------------~~~~~~~~~i~~~~~~P~i~ 235 (378)
..+++++|.|+ ++||.+...... ++++. ..++.+..+. +.+++++|++.. +|+++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~---~Pt~~ 121 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG---FPELV 121 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS---SSEEE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC---CCEEE
Confidence 34778999999 999998554432 22222 2345555432 137899999986 99999
Q ss_pred EeecCCCCccccCCCC--CHHHHHHHHHh
Q 017071 236 FLHLEAGKATPFRHQF--TRLAIANFVTH 262 (378)
Q Consensus 236 ~~~~~~~~~~~y~g~~--~~~~l~~fi~~ 262 (378)
++..++.....+ |.. +.+.+.++|+.
T Consensus 122 ~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 122 FIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp EECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred EEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 996554455566 877 88899999875
No 401
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=96.87 E-value=0.01 Score=49.38 Aligned_cols=36 Identities=14% Similarity=0.429 Sum_probs=30.8
Q ss_pred HHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+++||+|+||+++ +|+ .+.|..+.+.|.+.|.+...
T Consensus 162 ~~~GV~GtPtfvv--ng~---~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI---LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHCCCSSSEEEE--TTE---ECTTCCSHHHHHHHHHHHHT
T ss_pred HHcCCccCCEEEE--CCE---EEeCCCCHHHHHHHHHHHhh
Confidence 6789999999987 785 46899999999999988764
No 402
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.84 E-value=0.0014 Score=56.52 Aligned_cols=80 Identities=9% Similarity=-0.002 Sum_probs=56.4
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCc------------------CcHHHHHHcCCCCC--cEEEE
Q 017071 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEKDLAKEYNILAY--PTLYL 133 (378)
Q Consensus 74 ~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~------------------~~~~~~~~~~v~~~--Pt~~~ 133 (378)
...+..|+.++|++|......+.+++..+ ++....++.+ ....+.+++|.+++ |.+++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~--~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG--DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT--SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC--CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE
Confidence 45788899999999999999999998764 3432233322 12347889999988 99766
Q ss_pred EeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+|+. +.|..+.+.|.+.|.+..
T Consensus 121 --ng~~---~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 121 --NGRD---HVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp --TTTE---EEETTCHHHHHHHHHHHH
T ss_pred --CCEE---eecCCCHHHHHHHHHHhh
Confidence 6642 223346788888887654
No 403
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.82 E-value=0.0056 Score=46.56 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=58.4
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCCceeEEEE-------------------------------ccHHHHhhc
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQT-------------------------------TSADVAEFF 223 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~-------------------------------~~~~~~~~~ 223 (378)
.+++++|.|+.+||.+.... +.++. ....++.+..+ .+.++++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 35678888999999874433 44444 33445555544 244688999
Q ss_pred CCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 224 HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 224 ~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
++.. .|+++++.+++.....+.|..+.+++.++|++
T Consensus 101 ~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRS---YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCCS---SSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred Cccc---CCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 9986 89999997665556677898899999999875
No 404
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.82 E-value=0.0074 Score=47.20 Aligned_cols=81 Identities=7% Similarity=0.078 Sum_probs=58.3
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-cc-CCceeEEEEc---------------------------cHHHHhhcC--
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KL-HSDVNFYQTT---------------------------SADVAEFFH-- 224 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~-~~~~~f~~~~---------------------------~~~~~~~~~-- 224 (378)
.+++++|.|+++||.+... .+.+++ ++ ..++.+..+. ..++++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4578899999999987544 344444 33 2346665432 245677888
Q ss_pred CCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.. +|+.+++.+++.....+.|..+.++|.++|+.
T Consensus 103 v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 103 VGV---LPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp SCC---SSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred cCC---CCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 765 89999997766566788899999999999986
No 405
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.0038 Score=47.17 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=44.6
Q ss_pred cHHHHhcCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCcE---EEEEeCcCcHHHH----HHcCCCCCcEEE
Q 017071 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEAD---LVMVDAYLEKDLA----KEYNILAYPTLY 132 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a-----~wC~~C~~~~p~~~~~~~~~~~~~~---~~~vd~~~~~~~~----~~~~v~~~Pt~~ 132 (378)
.+++.+.+++ ++| |.. |||++|++....|.+. ++. |..+|++.++++. +..|...+|.++
T Consensus 8 ~v~~~i~~~~-Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vf 79 (121)
T 3gx8_A 8 AIEDAIESAP-VVL-FMKGTPEFPKCGFSRATIGLLGNQ------GVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLY 79 (121)
T ss_dssp HHHHHHHSCS-EEE-EESBCSSSBCTTHHHHHHHHHHHH------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHhccCC-EEE-EEeccCCCCCCccHHHHHHHHHHc------CCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEE
Confidence 3556666555 333 444 5999999999988875 344 7778887776543 345788899975
Q ss_pred EEeCCeEe
Q 017071 133 LFVAGVRQ 140 (378)
Q Consensus 133 ~~~~g~~~ 140 (378)
+ +|+.+
T Consensus 80 I--~g~~i 85 (121)
T 3gx8_A 80 V--NKEFI 85 (121)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 4 77543
No 406
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.80 E-value=0.0039 Score=48.17 Aligned_cols=80 Identities=11% Similarity=0.122 Sum_probs=57.9
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-ccC-CceeEEEEc----------------------------cHHHHhhcCC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLH-SDVNFYQTT----------------------------SADVAEFFHI 225 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~-~~~~f~~~~----------------------------~~~~~~~~~i 225 (378)
.+++++|.|+.+||.+... .+..++ ++. .++.|..+. +..+++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 4568888999999987444 344444 333 356665442 3478899999
Q ss_pred CCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHH
Q 017071 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~ 261 (378)
.. +|+++++..++.....+.|..+.+.|.++|+
T Consensus 113 ~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 113 IT---IPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CE---ESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred Cc---cCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 86 8999999766555567889999999999873
No 407
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.79 E-value=0.0026 Score=45.53 Aligned_cols=56 Identities=5% Similarity=0.008 Sum_probs=40.0
Q ss_pred EEEEecCCChhH------HhhHHHHHHHHHHhcCCcEEEEEeCcCcHH----HHHHcC--CCCCcEEEEEeCCeEe
Q 017071 77 MVMFYANWCYWS------KKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYN--ILAYPTLYLFVAGVRQ 140 (378)
Q Consensus 77 lv~F~a~wC~~C------~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~--v~~~Pt~~~~~~g~~~ 140 (378)
++.|+.+||+.| ++....|++. ++.+-.+|++.+++ +.+..| ...+|.++ -+|+.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~------~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~~i 71 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK------RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNHYC 71 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT------TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC------CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCEEE
Confidence 567899999999 6666665532 67788899987744 445678 77999874 477543
No 408
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.77 E-value=0.0051 Score=49.18 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=56.8
Q ss_pred HHHHHhhccCCeEEEEEEcCCCCccHHH---HHHHhcc-CCceeEE---EEccHH-HHhhcCCCCCCCCCeEEEeecCCC
Q 017071 171 DEAERILTVESKLVLGFLHDLEGMESEE---LAAASKL-HSDVNFY---QTTSAD-VAEFFHIHPKSKRPALIFLHLEAG 242 (378)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a~~-~~~~~f~---~~~~~~-~~~~~~i~~~~~~P~i~~~~~~~~ 242 (378)
+.++.....+++++|.|+++||.+.... +..++.. ..++.|. ...+++ ++..|++.. ..+|++++|..++.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~-~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDG-GYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTC-SCSSEEEEECTTSC
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccC-CcCCeEEEECCCCC
Confidence 5566666678899999999999975443 3332211 1123333 334444 778888732 23899999954433
Q ss_pred CccccCCC----------CCHHHHHHHHHh
Q 017071 243 KATPFRHQ----------FTRLAIANFVTH 262 (378)
Q Consensus 243 ~~~~y~g~----------~~~~~l~~fi~~ 262 (378)
....+.|. .+.+.|.++|+.
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHH
Confidence 44455563 577888888875
No 409
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.76 E-value=0.0078 Score=47.03 Aligned_cols=81 Identities=6% Similarity=0.041 Sum_probs=57.0
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE--------------------------ccHHHHhhcCCCC
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT--------------------------TSADVAEFFHIHP 227 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~--------------------------~~~~~~~~~~i~~ 227 (378)
.+++++|.|+.+||.+.... +.+++ .+.. ++.+..+ .+..+++.|++..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 45788899999999875433 33433 2322 3544422 3567889999986
Q ss_pred CCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 228 KSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 228 ~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
.|+++++..++.....|.|..+.+.|.++|+.
T Consensus 107 ---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 138 (153)
T 2l5o_A 107 ---YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDT 138 (153)
T ss_dssp ---SSEEEEECSSSCCCEEEESSCCHHHHHHHHHH
T ss_pred ---cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 89999997655555678898889999998875
No 410
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=96.74 E-value=0.0044 Score=49.85 Aligned_cols=75 Identities=8% Similarity=0.062 Sum_probs=55.0
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcC-CcE-EEEEeCc-----------------------CcHHHHHHcCC
Q 017071 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EAD-LVMVDAY-----------------------LEKDLAKEYNI 125 (378)
Q Consensus 72 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~~~~~~~-~~~-~~~vd~~-----------------------~~~~~~~~~~v 125 (378)
+++++++.|| ..||+.|..+.+.|.+.+.+++. ++. ++.|.+| .+.+++++||+
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv 120 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGT 120 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCC
Confidence 5677777777 46999999999999998888875 664 7777654 34568888887
Q ss_pred C-----------CCcEEEEEeCCeEeeeeeCC
Q 017071 126 L-----------AYPTLYLFVAGVRQFQFFGE 146 (378)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (378)
. ..-.++++++|++...+...
T Consensus 121 ~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~ 152 (171)
T 2xhf_A 121 ELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEP 152 (171)
T ss_dssp BCCCHHHHSSCCBCCEEEEEETTEEEEEEETT
T ss_pred ceeccccCCCcceEEEEEEEeCCEEEEEEEeC
Confidence 4 23466777889776666543
No 411
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.71 E-value=0.0029 Score=54.18 Aligned_cols=58 Identities=9% Similarity=0.135 Sum_probs=44.0
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc---HHHHHHcCCCCCcEEEEEeCCeE
Q 017071 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---KDLAKEYNILAYPTLYLFVAGVR 139 (378)
Q Consensus 74 ~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~Pt~~~~~~g~~ 139 (378)
...++.|+.+||++|++....+++. ++.+-.+|++.+ .++.+.+|..++|+++ .+|+.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~ 229 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKH 229 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 4457778999999999999888764 455666777654 3477889999999975 47754
No 412
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.70 E-value=0.0033 Score=46.71 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=39.7
Q ss_pred EEEEEecCCChhHH------hhHHHHHHHHHHhcCCcEEEEEeCcCcHHH----HHHc--------CCCCCcEEEEEeCC
Q 017071 76 VMVMFYANWCYWSK------KLAPEFAAAAKMLKGEADLVMVDAYLEKDL----AKEY--------NILAYPTLYLFVAG 137 (378)
Q Consensus 76 ~lv~F~a~wC~~C~------~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~----~~~~--------~v~~~Pt~~~~~~g 137 (378)
-++.|+.+||+.|+ +....|++. ++.|..+|++.+++. .+.+ |...+|.++ -+|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~------gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf--i~g 80 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN------KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF--NGD 80 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT------TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE--ETT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc------CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE--ECC
Confidence 36678899999999 566555532 678889999887653 3444 667789874 477
Q ss_pred eEe
Q 017071 138 VRQ 140 (378)
Q Consensus 138 ~~~ 140 (378)
+.+
T Consensus 81 ~~i 83 (111)
T 2ct6_A 81 RYC 83 (111)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 413
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=96.51 E-value=0.0053 Score=48.14 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=58.0
Q ss_pred CeEEEEEEcCCCCccHHH---HHHHh-ccCCceeEEEE------------------------------ccHHHHhhcCCC
Q 017071 181 SKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQT------------------------------TSADVAEFFHIH 226 (378)
Q Consensus 181 ~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~------------------------------~~~~~~~~~~i~ 226 (378)
++++|.|+.+||.+.... +..+. ++ ++.+..+ .+..+++.|++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 678899999999875443 44443 33 4554432 346788999998
Q ss_pred CCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcC
Q 017071 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (378)
Q Consensus 227 ~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (378)
. .|+++++..++.....+.|..+.++|.++|++..
T Consensus 109 ~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 109 G---QPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp S---SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred c---ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 6 8999988765545667789899999999999864
No 414
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.42 E-value=0.0062 Score=45.68 Aligned_cols=67 Identities=18% Similarity=0.267 Sum_probs=44.7
Q ss_pred cHHHHhcCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCcE-EEEEeCcCcHHHHH----HcCCCCCcEEEEE
Q 017071 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEAD-LVMVDAYLEKDLAK----EYNILAYPTLYLF 134 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a-----~wC~~C~~~~p~~~~~~~~~~~~~~-~~~vd~~~~~~~~~----~~~v~~~Pt~~~~ 134 (378)
.+++.+.+++ ++| |.. |||++|++....|.+. ++. +-.+|+++++++.+ ..|...+|.+++
T Consensus 12 ~v~~~i~~~~-Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI- 82 (118)
T 2wem_A 12 QLDALVKKDK-VVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL- 82 (118)
T ss_dssp HHHHHHHHSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEE-
T ss_pred HHHHHhccCC-EEE-EEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEE-
Confidence 4555665554 333 555 4999999999888764 463 77788877765443 347888999744
Q ss_pred eCCeEee
Q 017071 135 VAGVRQF 141 (378)
Q Consensus 135 ~~g~~~~ 141 (378)
+|+.+.
T Consensus 83 -~g~~IG 88 (118)
T 2wem_A 83 -NGEFVG 88 (118)
T ss_dssp -TTEEEE
T ss_pred -CCEEEe
Confidence 775443
No 415
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.38 E-value=0.024 Score=44.05 Aligned_cols=81 Identities=12% Similarity=0.115 Sum_probs=56.8
Q ss_pred CCeEEEEEEcCCCCcc---HHHHHHHh-ccCC-ceeEEEE---cc-----------------------HHHHhhcCCCCC
Q 017071 180 ESKLVLGFLHDLEGME---SEELAAAS-KLHS-DVNFYQT---TS-----------------------ADVAEFFHIHPK 228 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~-~~~f~~~---~~-----------------------~~~~~~~~i~~~ 228 (378)
+++++|.|+.+||.+. ...+.++. .+.+ ++.+..+ .+ .++++.|++..
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 108 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING- 108 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS-
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC-
Confidence 5678888999999864 44455544 3333 3655543 22 26888999986
Q ss_pred CCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 229 SKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 229 ~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
.|+++++.+++.....+.|..+.+.|.++|+..
T Consensus 109 --~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 109 --IPRFILLDRDGKIISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp --SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHH
T ss_pred --CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHH
Confidence 899999986655555677888888999998863
No 416
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.34 E-value=0.011 Score=46.17 Aligned_cols=82 Identities=15% Similarity=0.220 Sum_probs=57.2
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE---c----------------------cHHHHhhcCCCCC
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT---T----------------------SADVAEFFHIHPK 228 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~---~----------------------~~~~~~~~~i~~~ 228 (378)
.+++++|.|+.+||.+.... +..+. .+.. ++.+..+ . +..+++.|++..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP- 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC-
Confidence 35688899999999864433 33333 2322 3555533 1 347889999986
Q ss_pred CCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 229 SKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 229 ~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
.|+++++..++.....+.|..+.++|.++|+..
T Consensus 104 --~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 --LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp --SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred --CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 899999966554555677888999999999875
No 417
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=96.32 E-value=0.011 Score=46.29 Aligned_cols=79 Identities=6% Similarity=-0.044 Sum_probs=54.6
Q ss_pred CCeEEEEEEcCCCCccHHHHH---HHhccCCceeEEEE--------------------------ccHHHHhhcCCCCCCC
Q 017071 180 ESKLVLGFLHDLEGMESEELA---AASKLHSDVNFYQT--------------------------TSADVAEFFHIHPKSK 230 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~---~~a~~~~~~~f~~~--------------------------~~~~~~~~~~i~~~~~ 230 (378)
+++++|.|+.+||.+...... .+... +++.|..+ .+..+++.|++..
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~--- 117 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG--- 117 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS---
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc---
Confidence 567889999999998544433 33322 44655533 2346788899986
Q ss_pred CCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 231 ~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+|+++++..++.....+.|..+.+.+.++|+.
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 89877776554445567788888888888875
No 418
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=96.28 E-value=0.0079 Score=47.31 Aligned_cols=77 Identities=6% Similarity=-0.026 Sum_probs=46.8
Q ss_pred HHHHHhhccCCeEEEEEEcCCCCccHH---HHHH---HhccC-CceeEEEE--ccHHHHhhcCCCCCCCCCeEEEeecCC
Q 017071 171 DEAERILTVESKLVLGFLHDLEGMESE---ELAA---ASKLH-SDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEA 241 (378)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~---~a~~~-~~~~f~~~--~~~~~~~~~~i~~~~~~P~i~~~~~~~ 241 (378)
+.++.....+++++|.|+++||++... .+.. +..+. .++....+ ...+++..+++.. +|+++++++++
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~---~PT~~f~~~~G 111 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQY---VPRIMFVDPSL 111 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCC---SSEEEEECTTS
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCC---CCEEEEECCCC
Confidence 344555567899999999999997433 2222 11211 12222223 2345677888875 99999999554
Q ss_pred CCccccCCC
Q 017071 242 GKATPFRHQ 250 (378)
Q Consensus 242 ~~~~~y~g~ 250 (378)
.......|.
T Consensus 112 ~~v~~~~G~ 120 (151)
T 3ph9_A 112 TVRADIAGR 120 (151)
T ss_dssp CBCTTCCCS
T ss_pred CEEEEEeCC
Confidence 444555565
No 419
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.27 E-value=0.049 Score=45.18 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=36.7
Q ss_pred HHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 119 LAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 119 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
.++++||.|+||+++.++|+......|..+.+.+.+.|++.+.
T Consensus 161 ~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 161 LAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHh
Confidence 3567899999999998899877778899999999999988763
No 420
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=96.18 E-value=0.021 Score=44.80 Aligned_cols=80 Identities=8% Similarity=0.068 Sum_probs=56.7
Q ss_pred CCeEEEEEEcCCCCccHH----HHHHHh-ccC-CceeEEEEc-------------------------------cH-----
Q 017071 180 ESKLVLGFLHDLEGMESE----ELAAAS-KLH-SDVNFYQTT-------------------------------SA----- 217 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~----~~~~~a-~~~-~~~~f~~~~-------------------------------~~----- 217 (378)
+++++|.|+.+||.+... .+.++. ++. .++.|..+. +.
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 578899999999987544 344444 343 346655432 11
Q ss_pred HHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 218 DVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 218 ~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
.+++.|++.. .|+++++..++.....+.|..+.++|.++|+.
T Consensus 108 ~~~~~~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 149 (158)
T 3eyt_A 108 RTMAAYQMRG---TPSLLLIDKAGDLRAHHFGDVSELLLGAEIAT 149 (158)
T ss_dssp HHHHHTTCCS---SSEEEEECTTSEEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHcCCCC---CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 5888999986 89999997665455677788888888888875
No 421
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.12 E-value=0.029 Score=44.24 Aligned_cols=82 Identities=9% Similarity=0.077 Sum_probs=55.3
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE---ccHHHHhhc---------------------------
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT---TSADVAEFF--------------------------- 223 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~---~~~~~~~~~--------------------------- 223 (378)
.+++++|.|+.+||.+.... +.++. .+.. ++.+..+ .+.+..++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 35788999999999875443 44444 3333 2666543 234444444
Q ss_pred CCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 224 HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 224 ~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
++.. .|+++++..++.....+.|..+.+++.++|+..
T Consensus 113 ~i~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITG---IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCS---SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCC---CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 6765 899999976554556778888999999999864
No 422
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=96.10 E-value=0.025 Score=44.47 Aligned_cols=80 Identities=8% Similarity=0.074 Sum_probs=57.2
Q ss_pred CCeEEEEEEcCCCCccHH----HHHHHh-ccCC-ceeEEEEc-------------------------------cHH----
Q 017071 180 ESKLVLGFLHDLEGMESE----ELAAAS-KLHS-DVNFYQTT-------------------------------SAD---- 218 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~----~~~~~a-~~~~-~~~f~~~~-------------------------------~~~---- 218 (378)
+++++|.|+++||.+... .+.++. ++.+ ++.+..+. ...
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 678899999999987554 344444 3443 35555432 223
Q ss_pred --HHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 219 --VAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 219 --~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+++.|++.. .|+++++.+++.....+.|..+.+.|.++|+.
T Consensus 110 ~~~~~~~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 110 PSTMKKYRLEG---TPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp CHHHHHTTCCS---SSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred hhHHHhcccCc---cceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 888999986 89999998665556677798899999998875
No 423
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.09 E-value=0.017 Score=40.58 Aligned_cols=71 Identities=8% Similarity=0.154 Sum_probs=47.9
Q ss_pred EEEEEcCCCCccHHHHHHHhccCCc--eeEEEEccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHH
Q 017071 184 VLGFLHDLEGMESEELAAASKLHSD--VNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (378)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~--~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~ 261 (378)
++.|+++||++....-..+.+.... ..+....+++++++|++. .|++++ .++ +... |.++.+.|.+||.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~~~~vdid~~~~l~~~~g~~----vPtl~~-~~G--~~v~--g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGAFFSVFIDDDAALESAYGLR----VPVLRD-PMG--RELD--WPFDAPRLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCCEEEEECTTCHHHHHHHTTT----CSEEEC-TTC--CEEE--SCCCHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhheEEEECCCCHHHHHHhCCC----cCeEEE-ECC--EEEe--CCCCHHHHHHHHH
Confidence 6779999999854443333322222 223334678999999986 799887 443 3332 7889999999997
Q ss_pred hc
Q 017071 262 HT 263 (378)
Q Consensus 262 ~~ 263 (378)
..
T Consensus 74 ~~ 75 (87)
T 1ttz_A 74 AA 75 (87)
T ss_dssp TC
T ss_pred HH
Confidence 64
No 424
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.95 E-value=0.013 Score=48.06 Aligned_cols=42 Identities=7% Similarity=0.150 Sum_probs=35.7
Q ss_pred CCcEEEEEecCCChhHHhhHHHH-HHHHHHhcCCcEEEEEeCc
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKGEADLVMVDAY 114 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~-~~~~~~~~~~~~~~~vd~~ 114 (378)
.++++|.||..+||+|..+.+.+ .++.+.+.+.+.+..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 56789999999999999999999 9999888777777766644
No 425
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.89 E-value=0.026 Score=45.42 Aligned_cols=84 Identities=6% Similarity=-0.023 Sum_probs=55.7
Q ss_pred HHHHHhcCCcccC-CCHHHHHHhhccCCeEEEEEEcCCCCccHH----HH--HHHh-ccCCceeEEEE---ccHHHHhhc
Q 017071 155 WVREKMTLGTYSI-TTTDEAERILTVESKLVLGFLHDLEGMESE----EL--AAAS-KLHSDVNFYQT---TSADVAEFF 223 (378)
Q Consensus 155 ~i~~~~~~~~~~i-~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~----~~--~~~a-~~~~~~~f~~~---~~~~~~~~~ 223 (378)
++.++...++.=. -+.+.++.....+++++|.|+++||++... .| .+++ .+..++.+..+ ..+++.+.|
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y 92 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIY 92 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHH
Confidence 4455555555332 346788888888999999999999997543 22 1233 23334555443 456788887
Q ss_pred --------CCCCCCCCCeEEEeecCC
Q 017071 224 --------HIHPKSKRPALIFLHLEA 241 (378)
Q Consensus 224 --------~i~~~~~~P~i~~~~~~~ 241 (378)
++.+ +|+++++++++
T Consensus 93 ~~~~q~~~gv~g---~Pt~v~l~~dG 115 (173)
T 3ira_A 93 MTVCQIILGRGG---WPLNIIMTPGK 115 (173)
T ss_dssp HHHHHHHHSCCC---SSEEEEECTTS
T ss_pred HHHHHHHcCCCC---CcceeeECCCC
Confidence 8876 99999998643
No 426
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.80 E-value=0.038 Score=43.44 Aligned_cols=86 Identities=5% Similarity=0.072 Sum_probs=58.7
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-ccC-CceeEEEE-c---------------------cHHHHhhcCCCCCCCC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLH-SDVNFYQT-T---------------------SADVAEFFHIHPKSKR 231 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~-~~~~f~~~-~---------------------~~~~~~~~~i~~~~~~ 231 (378)
.+++++|.|+.+||.+... .+.++. ++. .++.+..+ . +.++++.|++.. +
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~---~ 116 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR---L 116 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS---S
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC---c
Confidence 3568899999999987543 344444 333 35666543 1 357899999986 8
Q ss_pred CeEEEeecCCCCccccCCC--CCHHHHHHHHHhcCCCc
Q 017071 232 PALIFLHLEAGKATPFRHQ--FTRLAIANFVTHTKHPL 267 (378)
Q Consensus 232 P~i~~~~~~~~~~~~y~g~--~~~~~l~~fi~~~~~P~ 267 (378)
|+++++..++.....+.|. .+..++.+.+.++..|.
T Consensus 117 P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 117 PDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp SEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC---
T ss_pred ceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcccc
Confidence 9988887665555666775 46688999998887664
No 427
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.80 E-value=0.019 Score=42.07 Aligned_cols=71 Identities=8% Similarity=0.096 Sum_probs=49.4
Q ss_pred eEEEEEEcCCCCccH---HHHHHHhccCCceeEEEE---ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHH
Q 017071 182 KLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLA 255 (378)
Q Consensus 182 ~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~ 255 (378)
..++.|+++||.+.. +.+.+++.-.+ +.|..+ .+++++.+|++. .|++++|.++ +.. +.|.++.+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~----VP~l~~~~dG--~~v-~~g~~~~~~ 101 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR----VPVLFAVNED--KEL-CHYFLDSDV 101 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS----CSEEEETTTT--EEE-ECSSCCCHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC----CceEEEEECC--EEE-EecCCCHHH
Confidence 457889999998743 34444442222 444433 578999999985 7999988865 333 457788899
Q ss_pred HHHHH
Q 017071 256 IANFV 260 (378)
Q Consensus 256 l~~fi 260 (378)
|.+||
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
No 428
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.79 E-value=0.02 Score=45.53 Aligned_cols=79 Identities=6% Similarity=-0.045 Sum_probs=52.8
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHhccCCceeEEE--------------------------EccHHHHhhcCCCCCC
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQ--------------------------TTSADVAEFFHIHPKS 229 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~--------------------------~~~~~~~~~~~i~~~~ 229 (378)
.+++++|.|+.+||.+.... +.++++. ++.+.. ..+..+++.|++..
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG-- 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS--
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc--
Confidence 56788899999999875443 3333322 343332 23456888899986
Q ss_pred CCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 230 ~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
.|+.+++..++.....+.|..+.+.+.++|+.
T Consensus 126 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 126 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp -SSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred -cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 89777676554444567788888888888765
No 429
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.76 E-value=0.032 Score=43.40 Aligned_cols=82 Identities=9% Similarity=0.107 Sum_probs=54.4
Q ss_pred CCeEEEEEEcCCCCccHHH---HHHHh-ccCCc-eeEEEEc---cH----------------------HHHhhcCCCCCC
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAAAS-KLHSD-VNFYQTT---SA----------------------DVAEFFHIHPKS 229 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~-~~f~~~~---~~----------------------~~~~~~~i~~~~ 229 (378)
+++++|.|+.+||.+.... +.++. .+..+ +.+..+. +. ++++.|++..
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 105 (152)
T 3gl3_A 28 GSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG-- 105 (152)
T ss_dssp TSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS--
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC--
Confidence 5688899999999875443 33433 33332 5554431 22 6778899986
Q ss_pred CCCeEEEeecCCCCccccCCC--CCHHHHHHHHHhcC
Q 017071 230 KRPALIFLHLEAGKATPFRHQ--FTRLAIANFVTHTK 264 (378)
Q Consensus 230 ~~P~i~~~~~~~~~~~~y~g~--~~~~~l~~fi~~~~ 264 (378)
.|+++++..++.....+.|. .+.++|.++|++..
T Consensus 106 -~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 106 -MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp -SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred -CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 89999886655444556664 35589999998764
No 430
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.75 E-value=0.025 Score=45.22 Aligned_cols=78 Identities=13% Similarity=-0.043 Sum_probs=51.3
Q ss_pred CCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEEE---ccHHHHhhcC---CCCCCCCCeEEEeecCCCCccccCCC
Q 017071 180 ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFH---IHPKSKRPALIFLHLEAGKATPFRHQ 250 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~~~~~~~---i~~~~~~P~i~~~~~~~~~~~~y~g~ 250 (378)
+++++|.|+++||++. .+.+.+++....++.|..+ .+++++++|. +.. .|++++++.++.....+ |.
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~---iPt~i~~~~~G~~~~~~-g~ 129 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIA---IPLVLVLDEEFNLLGRF-VE 129 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCC---SSEEEEECTTCCEEEEE-ES
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCC---cCeEEEECCCCCEEEEE-cC
Confidence 5688899999999985 4456666644456777765 3456777787 654 99999999864333344 44
Q ss_pred CCHHHHHHHHHh
Q 017071 251 FTRLAIANFVTH 262 (378)
Q Consensus 251 ~~~~~l~~fi~~ 262 (378)
.. ..+...+..
T Consensus 130 ~p-~~~~~~i~~ 140 (167)
T 1z6n_A 130 RP-QAVLDGGPQ 140 (167)
T ss_dssp SC-HHHHHHCHH
T ss_pred CC-HHHHHhHHH
Confidence 33 344455443
No 431
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=95.75 E-value=0.05 Score=42.99 Aligned_cols=80 Identities=6% Similarity=0.029 Sum_probs=55.7
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHhccCCceeEEEE-cc--------------------------------------
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT-TS-------------------------------------- 216 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~-~~-------------------------------------- 216 (378)
..++++|.|+.+||.+.... +.++.+...++.|..+ .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIM 115 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeE
Confidence 35788999999999985444 4444422226766644 22
Q ss_pred ----HHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCC-CHHHHHHHHHhc
Q 017071 217 ----ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVTHT 263 (378)
Q Consensus 217 ----~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~-~~~~l~~fi~~~ 263 (378)
.++.+.|++.. +|+++++..++ +... .|.. +.+.|.++|+..
T Consensus 116 ~~d~~~~~~~~~v~~---~P~~~lid~~G-~i~~-~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 116 VMDDGSLVEKFNVRS---IDYIVIMDKSS-NVLY-AGTTPSLGELESVIKSV 162 (165)
T ss_dssp EECCSHHHHHTTCCS---SSEEEEEETTC-CEEE-EEESCCHHHHHHHHHHC
T ss_pred EeChHHHHHHhCCCC---ceEEEEEcCCC-cEEE-eCCCCCHHHHHHHHHHH
Confidence 27888899986 89999997653 3333 7888 889999998764
No 432
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=95.59 E-value=0.02 Score=46.12 Aligned_cols=80 Identities=6% Similarity=-0.013 Sum_probs=53.3
Q ss_pred CCeEEEEEEcCCCCccHHHHHHHhccC-CceeEEEE--------------------------ccHHHHhhcCCCCCCCCC
Q 017071 180 ESKLVLGFLHDLEGMESEELAAASKLH-SDVNFYQT--------------------------TSADVAEFFHIHPKSKRP 232 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a~~~-~~~~f~~~--------------------------~~~~~~~~~~i~~~~~~P 232 (378)
+++++|.|+.+||.+.......+.++. .++.+..+ .+..+++.|++.. +|
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~---~P 134 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG---AP 134 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS---SC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC---CC
Confidence 567888899999987544443333111 13444322 3456778889876 89
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.+++..++.....+.|..+.+.+.++|..
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred eEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 888887665455567788888888887765
No 433
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=95.45 E-value=0.047 Score=42.05 Aligned_cols=80 Identities=14% Similarity=0.033 Sum_probs=51.5
Q ss_pred cCCeEEEEEEcCCCCc---cHHHHHHHh-ccCCc-eeEEEE---ccHH-------------------------HHhhcCC
Q 017071 179 VESKLVLGFLHDLEGM---ESEELAAAS-KLHSD-VNFYQT---TSAD-------------------------VAEFFHI 225 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~-~~f~~~---~~~~-------------------------~~~~~~i 225 (378)
.+++++|.|+++||.+ ..+.+..+. .+..+ +.|..+ .+.+ +++.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 3578899999999986 344455544 33332 666543 2334 8889999
Q ss_pred CCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHH
Q 017071 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~ 261 (378)
.. .|+++++..++.....+.|..+.+++.+.+.
T Consensus 110 ~~---~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~ 142 (148)
T 3hcz_A 110 YA---TPVLYVLDKNKVIIAKRIGYENLDDFLVQYE 142 (148)
T ss_dssp CS---SCEEEEECTTCBEEEESCCGGGHHHHHHHHH
T ss_pred CC---CCEEEEECCCCcEEEecCCHHHHHHHHHHHH
Confidence 86 8999999765545555666655555555544
No 434
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=95.40 E-value=0.049 Score=42.36 Aligned_cols=82 Identities=6% Similarity=0.084 Sum_probs=54.2
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-ccCC-ceeEEEE-cc-------------------------HHHHhhcCCCC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLHS-DVNFYQT-TS-------------------------ADVAEFFHIHP 227 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~-~~~f~~~-~~-------------------------~~~~~~~~i~~ 227 (378)
.+++++|.|+.+||.+... .+.++. .+.+ ++.+..+ .+ ..+++.|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 3578889999999986444 344444 3333 4555543 22 23788899986
Q ss_pred CCCCCeEEEeecCCCCccccCCCC--CHHHHHHHHHhc
Q 017071 228 KSKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTHT 263 (378)
Q Consensus 228 ~~~~P~i~~~~~~~~~~~~y~g~~--~~~~l~~fi~~~ 263 (378)
+|+++++..++.....+.|.. +.+++.++|++-
T Consensus 107 ---~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 107 ---VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 898888876554445566664 667999999764
No 435
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=95.37 E-value=0.076 Score=40.80 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=51.9
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-cc-CC-ceeEEEE---c-------------------------cHHHHhhcC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KL-HS-DVNFYQT---T-------------------------SADVAEFFH 224 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~-~~-~~~f~~~---~-------------------------~~~~~~~~~ 224 (378)
.+++++|.|+.+||.+... .+..++ ++ .+ ++.+..+ . +..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4578899999999987544 344444 34 33 3666543 1 347889999
Q ss_pred CCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.. +|+++++..++.....+. +.+++.++|+..
T Consensus 112 v~~---~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ILT---LPTNILLSPTGKILARDI---QGEALTGKLKEL 144 (148)
T ss_dssp CCS---SSEEEEECTTSBEEEESC---CHHHHHHHHHHH
T ss_pred CCC---cCEEEEECCCCeEEEecC---CHHHHHHHHHHH
Confidence 986 899999965432222222 678888888753
No 436
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.34 E-value=0.026 Score=49.39 Aligned_cols=83 Identities=14% Similarity=-0.083 Sum_probs=55.7
Q ss_pred HHHHHHhhccCCeEEEEEEcCCCCcc---HHHHHHHhccCCceeEEE----EccHHHHhhcCCCCCCCCCeEEEeecCCC
Q 017071 170 TDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQ----TTSADVAEFFHIHPKSKRPALIFLHLEAG 242 (378)
Q Consensus 170 ~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~----~~~~~~~~~~~i~~~~~~P~i~~~~~~~~ 242 (378)
...+.+.+++.. ++.|+++||++. .+.|.++++....+.+.. ..+++++++++++. +|++++ ++
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~~---vPT~~i--~G-- 259 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITS---YPTWII--NG-- 259 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCCS---TTEEEE--TT--
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCcc---cCeEEE--CC--
Confidence 445555555554 578999999974 345556553333222221 11678999999997 999654 33
Q ss_pred CccccCCCCCHHHHHHHHHhc
Q 017071 243 KATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 243 ~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+ .|.|..+.++|.+|+...
T Consensus 260 ~--~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 260 R--TYTGVRSLEALAVASGYP 278 (291)
T ss_dssp E--EEESCCCHHHHHHHTCCC
T ss_pred E--EecCCCCHHHHHHHHCCC
Confidence 3 389999999999998643
No 437
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=95.16 E-value=0.034 Score=46.39 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=39.6
Q ss_pred cHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhc
Q 017071 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (378)
Q Consensus 116 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (378)
+...++++||.|+||++++.+|+....+.|..+.+.+.+.|.+.+.
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 4567889999999999999999776678899999999999987763
No 438
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=94.96 E-value=0.11 Score=40.38 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=48.7
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE---c-------------------------cHHHHhhcCC
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT---T-------------------------SADVAEFFHI 225 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~---~-------------------------~~~~~~~~~i 225 (378)
.+++++|.|+++||.+.... +.++. ++.. ++.+..+ . +.++++.|++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 35688999999999975443 44443 3333 3665543 1 3578889999
Q ss_pred CCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
.. .|+++++..++.....+ .+.+++.++|+.
T Consensus 108 ~~---~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 138 (152)
T 2lrn_A 108 VG---FPHIILVDPEGKIVAKE---LRGDDLYNTVEK 138 (152)
T ss_dssp CS---SCEEEEECTTSEEEEEC---CCTTHHHHHHHH
T ss_pred Cc---CCeEEEECCCCeEEEee---CCHHHHHHHHHH
Confidence 86 89999996543222232 233566666654
No 439
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=94.76 E-value=0.7 Score=33.02 Aligned_cols=84 Identities=11% Similarity=0.180 Sum_probs=69.8
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhc--CCcEEEEEeCcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHH
Q 017071 76 VMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (378)
Q Consensus 76 ~lv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (378)
....|.|..-+.+++....+.++-+.+. +.+.+-.||+.+++++++.++|-.+||++=.... ...+..|..-..++.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~-P~rriiGd~i~~ql~ 91 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPG-SRQVLSGIDLTDQLA 91 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESS-SCEEEESSCHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhccCCC-CceEEeChHHHHHHH
Confidence 4447778888999998888888766554 3899999999999999999999999998777655 677889998889999
Q ss_pred HHHHHHh
Q 017071 154 AWVREKM 160 (378)
Q Consensus 154 ~~i~~~~ 160 (378)
.|.-+-.
T Consensus 92 ~wwprWq 98 (105)
T 1t4y_A 92 NQLPQWL 98 (105)
T ss_dssp HHHHHHH
T ss_pred HHhHHHH
Confidence 9886543
No 440
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.75 E-value=0.18 Score=39.45 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=53.3
Q ss_pred HhhccCCeEEEEEEcCCCCccHHH----HH--HHhc-cCCceeEEEE-----ccHHHHhhcCCCCCCCCCeEEEeecC-C
Q 017071 175 RILTVESKLVLGFLHDLEGMESEE----LA--AASK-LHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLE-A 241 (378)
Q Consensus 175 ~~~~~~~~~~v~f~~~~~~~~~~~----~~--~~a~-~~~~~~f~~~-----~~~~~~~~~~i~~~~~~P~i~~~~~~-~ 241 (378)
...+.+++++|.|+.+||...... |. +++. +..++.+... .+..+.++|++.. +|+++++... +
T Consensus 37 ~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~---~P~~~fld~~~G 113 (153)
T 2dlx_A 37 CGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGD---FPYVSILDPRTG 113 (153)
T ss_dssp HHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCS---SSEEEEECTTTC
T ss_pred HHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCC---CCEEEEEeCCCC
Confidence 334558899999999999864322 21 2222 2234444432 2345788999986 9999999875 3
Q ss_pred CCccccCCCCCHHHHHHHHHh
Q 017071 242 GKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 242 ~~~~~y~g~~~~~~l~~fi~~ 262 (378)
.....+.| .+.+++.++|+.
T Consensus 114 ~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 114 QKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp CCCEEESS-CCHHHHHHHHHH
T ss_pred cEeeecCC-CCHHHHHHHHHH
Confidence 34444556 788877777654
No 441
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=94.67 E-value=0.1 Score=42.03 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=51.5
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-ccCCc-e------eEEEE---c-cHHHHhhc--------------------
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLHSD-V------NFYQT---T-SADVAEFF-------------------- 223 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~-~------~f~~~---~-~~~~~~~~-------------------- 223 (378)
.+++++|.|+.+||.+... .+.++. ++..+ + .|..+ . +.+..++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 3578899999999987443 333333 22222 4 55543 2 34444444
Q ss_pred -----CCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 224 -----HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 224 -----~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
++.. +|+.+++.+.......+.|..+.++|.++|+.
T Consensus 138 ~~~~~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 138 SLGGVPASV---IPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp GTTTCCTTC---CSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred HhccCCCCC---CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4443 89888777655555677888899999998875
No 442
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=94.30 E-value=0.035 Score=41.03 Aligned_cols=85 Identities=8% Similarity=0.087 Sum_probs=50.8
Q ss_pred HHHHHhhccCCeEEEEEEcCCCCccHHHHHHHhccCCceeEEEEc-c-------HHHHhhcCCCCCCCCCeEEEeecCCC
Q 017071 171 DEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTT-S-------ADVAEFFHIHPKSKRPALIFLHLEAG 242 (378)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~-~-------~~~~~~~~i~~~~~~P~i~~~~~~~~ 242 (378)
+.+++.++.. .+++ |+.+||++.......+..+...+.+..+. + .+++++|++.. +|++ |..+ .
T Consensus 11 ~~~~~~~~~~-~vv~-f~a~~C~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~---~Pt~--~~~g-~ 82 (116)
T 2e7p_A 11 KKAKELASSA-PVVV-FSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGT---VPNV--FIGG-K 82 (116)
T ss_dssp HHHHHHHTSS-SEEE-EECTTCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCS---SCEE--EETT-E
T ss_pred HHHHHHHcCC-CEEE-EECCCChhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCCC---cCEE--EECC-E
Confidence 3444555443 4444 99999998665554444444455555442 2 35889999986 8998 3333 1
Q ss_pred CccccCCCC---CHHHHHHHHHhc
Q 017071 243 KATPFRHQF---TRLAIANFVTHT 263 (378)
Q Consensus 243 ~~~~y~g~~---~~~~l~~fi~~~ 263 (378)
....+.|.. +.+.|.+||+..
T Consensus 83 ~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 83 QIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EEECHHHHHHHHHTTCHHHHHHHT
T ss_pred EECChHHHHHHHhCChHHHHHHHc
Confidence 222333332 556788888865
No 443
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=94.22 E-value=0.085 Score=47.65 Aligned_cols=80 Identities=5% Similarity=-0.099 Sum_probs=55.9
Q ss_pred CCeEEEEEEcCCCCccHH---HHHHHh-ccCC-ceeEEEEc------------------------------cHHHHhhcC
Q 017071 180 ESKLVLGFLHDLEGMESE---ELAAAS-KLHS-DVNFYQTT------------------------------SADVAEFFH 224 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~-~~~f~~~~------------------------------~~~~~~~~~ 224 (378)
.++++|.|+.+||.+... .+.+++ ++.+ ++.+..+. +.++++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 578899999999987543 344444 3332 35555442 246888899
Q ss_pred CCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.. +|+++++..+......+.|..+.++|.++|++
T Consensus 162 V~~---~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~ 196 (352)
T 2hyx_A 162 NRY---WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQ 196 (352)
T ss_dssp CCE---ESEEEEECTTSBEEEEEESBCCHHHHHHHHHH
T ss_pred CCc---cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 986 89999996655455567788888888888875
No 444
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=94.21 E-value=0.091 Score=39.13 Aligned_cols=68 Identities=16% Similarity=0.286 Sum_probs=44.2
Q ss_pred hhcHHHHhcCCCcEEEEEe-----cCCChhHHhhHHHHHHHHHHhcCCc-EEEEEeCcCcHHHHH----HcCCCCCcEEE
Q 017071 63 GKNFSEFMGKNRNVMVMFY-----ANWCYWSKKLAPEFAAAAKMLKGEA-DLVMVDAYLEKDLAK----EYNILAYPTLY 132 (378)
Q Consensus 63 ~~~~~~~~~~~~~~lv~F~-----a~wC~~C~~~~p~~~~~~~~~~~~~-~~~~vd~~~~~~~~~----~~~v~~~Pt~~ 132 (378)
.+.+++.+.++++ + .|- +|.|++|++....|.+. ++ .|..+|+++++++.+ .-|-+.+|.++
T Consensus 10 ~e~i~~~i~~~~V-v-vF~Kgt~~~P~C~fc~~ak~lL~~~------gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIF 81 (118)
T 2wul_A 10 AEQLDALVKKDKV-V-VFLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY 81 (118)
T ss_dssp HHHHHHHHHHSSE-E-EEESBCSSSBSSHHHHHHHHHHHHT------TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHHHhcCCE-E-EEEcCCCCCCCCHHHHHHHHHHHHh------CCcCeEeecccCCHHHHHHHHHhccCCCCCeEe
Confidence 4556777766653 3 343 36799999988877543 34 377788888766543 34667788875
Q ss_pred EEeCCeEe
Q 017071 133 LFVAGVRQ 140 (378)
Q Consensus 133 ~~~~g~~~ 140 (378)
+ +|+-+
T Consensus 82 I--~g~~I 87 (118)
T 2wul_A 82 L--NGEFV 87 (118)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 4 77433
No 445
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=93.88 E-value=0.14 Score=38.15 Aligned_cols=57 Identities=9% Similarity=0.088 Sum_probs=37.4
Q ss_pred EEEEEecCCChhHH------hhHHHHHHHHHHhcCCcEEEEEeCcCcHH----HHHHc--------CCCCCcEEEEEeCC
Q 017071 76 VMVMFYANWCYWSK------KLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEY--------NILAYPTLYLFVAG 137 (378)
Q Consensus 76 ~lv~F~a~wC~~C~------~~~p~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~--------~v~~~Pt~~~~~~g 137 (378)
+++.|.+++|+.|+ +....|+. .+|.|-.+|++.+++ +.++. |...+|.++ .+|
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~------kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIF--i~~ 72 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA------NKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIF--NES 72 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH------TTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEE--ETT
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH------CCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEE--ECC
Confidence 35678899999994 33333222 278999999987654 44566 677788654 466
Q ss_pred eEe
Q 017071 138 VRQ 140 (378)
Q Consensus 138 ~~~ 140 (378)
+.+
T Consensus 73 ~~i 75 (121)
T 1u6t_A 73 QYR 75 (121)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 446
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=93.80 E-value=0.48 Score=36.42 Aligned_cols=78 Identities=13% Similarity=0.182 Sum_probs=49.4
Q ss_pred cCCeEEEEEEcCCCCc--cHHHH---HHHh-cc-CC-ceeEEEE---c-------------------------cHHHHhh
Q 017071 179 VESKLVLGFLHDLEGM--ESEEL---AAAS-KL-HS-DVNFYQT---T-------------------------SADVAEF 222 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~--~~~~~---~~~a-~~-~~-~~~f~~~---~-------------------------~~~~~~~ 222 (378)
.+++++|.|+.+||.+ ..... .++. ++ .+ ++.+..+ . +.++.+.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3578899999999999 55544 3333 33 33 3555533 1 2368888
Q ss_pred cCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 223 ~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
|++.. .|+++++.+++.....+ .+.+++.++|+.
T Consensus 112 ~~v~~---~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 145 (150)
T 3fw2_A 112 YSIYK---IPANILLSSDGKILAKN---LRGEELKKKIEN 145 (150)
T ss_dssp TTCCS---SSEEEEECTTSBEEEES---CCHHHHHHHHHH
T ss_pred cCCCc---cCeEEEECCCCEEEEcc---CCHHHHHHHHHH
Confidence 99986 89999996553222222 256777777654
No 447
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=93.74 E-value=0.12 Score=42.16 Aligned_cols=79 Identities=13% Similarity=0.115 Sum_probs=49.6
Q ss_pred CeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEEc--------------------------------cHHHHhhc
Q 017071 181 SKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQTT--------------------------------SADVAEFF 223 (378)
Q Consensus 181 ~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~~--------------------------------~~~~~~~~ 223 (378)
.+++|.|+.+||.+.... +.++. ++.. ++.+..+. +.++++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 358888999999764433 33333 2322 25554332 34678889
Q ss_pred CCCCCCCCCeEEEeecCCCCccc---------cCCCCCHHHHHHHHHh
Q 017071 224 HIHPKSKRPALIFLHLEAGKATP---------FRHQFTRLAIANFVTH 262 (378)
Q Consensus 224 ~i~~~~~~P~i~~~~~~~~~~~~---------y~g~~~~~~l~~fi~~ 262 (378)
++.. .|+++++.+++..... +.|..+.++|.++|+.
T Consensus 127 ~v~~---~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 171 (196)
T 2ywi_A 127 DAAC---TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDA 171 (196)
T ss_dssp TCCE---ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHH
T ss_pred CCCC---CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHH
Confidence 9875 8999998755433323 4566777888888775
No 448
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=93.68 E-value=0.24 Score=39.15 Aligned_cols=80 Identities=13% Similarity=0.071 Sum_probs=52.0
Q ss_pred CCeEEEEEEcCCCCc-cHHH---HHHHh-ccC-----CceeEEEE-cc------------------------------HH
Q 017071 180 ESKLVLGFLHDLEGM-ESEE---LAAAS-KLH-----SDVNFYQT-TS------------------------------AD 218 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~-~~~~---~~~~a-~~~-----~~~~f~~~-~~------------------------------~~ 218 (378)
.++++|.|+.+||.+ .... +.++. ++. .++.+..+ .+ ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 468889999999997 5443 33333 221 35665543 22 14
Q ss_pred HHhhcCCCCCCCCC---------------eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 219 VAEFFHIHPKSKRP---------------ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 219 ~~~~~~i~~~~~~P---------------~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+++.|++.. .| +++++.+.+.....|.|..+.++|.+.|+.
T Consensus 106 ~~~~~~v~~---~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 106 ASHSYRVYY---NAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHSCCCC---EECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHhCeEE---EecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 777888864 34 777776655555567788888888888775
No 449
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.38 E-value=0.49 Score=33.87 Aligned_cols=75 Identities=7% Similarity=0.010 Sum_probs=50.3
Q ss_pred CCeEEEEEEcCCCCccHHHHHHHhccCCceeEEEE-----ccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHH
Q 017071 180 ESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRL 254 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-----~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~ 254 (378)
..+.++.|+.+||++....-..+.++..++.|..+ .+++++++|+ .. .|+++ ..+ +.. .-|.++.+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~~~~~~el~~~~g-~~---vP~l~--~~g--~~~-~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYK-FD---IPVFH--LNG--QFL-MMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSS-SS---CSEEE--ESS--SEE-EESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhCCeEEEEECCCcchHHHHHHHC-CC---CCEEE--ECC--EEE-EecCCCHH
Confidence 44567889999998765554444444445666543 3577889999 65 89763 443 332 34557889
Q ss_pred HHHHHHHhc
Q 017071 255 AIANFVTHT 263 (378)
Q Consensus 255 ~l~~fi~~~ 263 (378)
.|.+||...
T Consensus 86 ~l~~~l~~~ 94 (100)
T 1wjk_A 86 KLEKQLRKL 94 (100)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHHHH
Confidence 999999864
No 450
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=93.05 E-value=0.076 Score=47.70 Aligned_cols=70 Identities=11% Similarity=0.216 Sum_probs=40.2
Q ss_pred cHHHHhcCCCcEEEEEecCCChhHHhhHH-HHHHHHHHhcCCcEEEEEeC-cCc----HHHHHHcCCCCCcEEEEEeCCe
Q 017071 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAP-EFAAAAKMLKGEADLVMVDA-YLE----KDLAKEYNILAYPTLYLFVAGV 138 (378)
Q Consensus 65 ~~~~~~~~~~~~lv~F~a~wC~~C~~~~p-~~~~~~~~~~~~~~~~~vd~-~~~----~~~~~~~~v~~~Pt~~~~~~g~ 138 (378)
.+++++..++ ++.|..+||++|++... .|++..-.+. .+.++.+|- +++ ..+.+..|...+|.+++ +|+
T Consensus 253 ~V~~lI~~~~--VvVYsk~~CPyC~~Ak~~LL~~~gV~y~-eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI--~Gk 327 (362)
T 2jad_A 253 HVKDLIAENE--IFVASKTYCPYSHAALNTLFEKLKVPRS-KVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI--NGK 327 (362)
T ss_dssp HHHHHHHTCS--EEEEECTTCHHHHHHHHHHHTTTCCCTT-TEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEE--TTE
T ss_pred HHHHHhccCC--EEEEEcCCCcchHHHHHHHHHHcCCCcc-eEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEE--CCE
Confidence 3445555554 45588999999998765 4444322221 233333321 223 23456679999998754 775
Q ss_pred E
Q 017071 139 R 139 (378)
Q Consensus 139 ~ 139 (378)
.
T Consensus 328 ~ 328 (362)
T 2jad_A 328 H 328 (362)
T ss_dssp E
T ss_pred E
Confidence 4
No 451
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=92.99 E-value=0.22 Score=40.15 Aligned_cols=80 Identities=14% Similarity=0.154 Sum_probs=48.1
Q ss_pred CCeEEEEEEcCCCCc---cHHHHHHHh-ccCCceeEEEEc--------------------------------cHHHHhhc
Q 017071 180 ESKLVLGFLHDLEGM---ESEELAAAS-KLHSDVNFYQTT--------------------------------SADVAEFF 223 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~~~f~~~~--------------------------------~~~~~~~~ 223 (378)
.++++|.|+.+||.+ ....+.++. ++.+++.+..+. +.++++.|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 467888888999875 344555544 343335554332 34678888
Q ss_pred CCCCCCCCCeEEEeecCCCCccc--------cCCCCCHHHHHHHHHh
Q 017071 224 HIHPKSKRPALIFLHLEAGKATP--------FRHQFTRLAIANFVTH 262 (378)
Q Consensus 224 ~i~~~~~~P~i~~~~~~~~~~~~--------y~g~~~~~~l~~fi~~ 262 (378)
++.. .|+++++..++..... +.|..+.++|.+.|+.
T Consensus 113 ~v~~---~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ 156 (188)
T 2cvb_A 113 RALR---TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEA 156 (188)
T ss_dssp TCCE---ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHH
T ss_pred CCCC---CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHH
Confidence 8875 8999888654321111 1233356677777765
No 452
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=92.68 E-value=0.54 Score=34.98 Aligned_cols=43 Identities=16% Similarity=0.059 Sum_probs=30.6
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCcH-------HHHHHcCC
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNI 125 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v 125 (378)
+..|+.+||+.|++....+++. ++.+-.+|..+++ ++.+++|+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5567899999999998888763 5667677775432 34556663
No 453
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=92.46 E-value=0.43 Score=36.22 Aligned_cols=78 Identities=8% Similarity=0.126 Sum_probs=48.4
Q ss_pred CCeEEEEEEcCCCCccHHH---HHH---Hh-ccC-CceeEEEE---ccHHH------------------------HhhcC
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAA---AS-KLH-SDVNFYQT---TSADV------------------------AEFFH 224 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~---~a-~~~-~~~~f~~~---~~~~~------------------------~~~~~ 224 (378)
+++++|.|+++||.+.... +.+ +. .+. .++.+..+ .+.+. ++.|+
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 5788889999999875554 222 22 221 23555433 12222 23788
Q ss_pred CCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.. .|+++++.+.+ + +.+ +..+.++|.++|++.
T Consensus 107 v~~---~P~~~lid~~G-~-i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 107 IRA---TPTIYLLDGRK-R-VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCS---SSEEEEECTTC-B-EEE-CSCCHHHHHHHHHC-
T ss_pred CCC---CCeEEEECCCC-C-EEe-cCCCHHHHHHHHHHH
Confidence 876 89999997543 2 233 557889999999865
No 454
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=92.30 E-value=0.27 Score=38.47 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=50.7
Q ss_pred CCeEEEEEEcCCCCc-cHHHH---HHHh-ccC-----CceeEEEE-ccH------------------------------H
Q 017071 180 ESKLVLGFLHDLEGM-ESEEL---AAAS-KLH-----SDVNFYQT-TSA------------------------------D 218 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~-~~~~~---~~~a-~~~-----~~~~f~~~-~~~------------------------------~ 218 (378)
.++++|.|+.+||.+ ..... .++. ++. .++.+..+ .++ .
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 568888999999997 54333 3333 222 25555433 221 3
Q ss_pred HHhhcCCCCCCCCC---------------eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 219 VAEFFHIHPKSKRP---------------ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 219 ~~~~~~i~~~~~~P---------------~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+++.|++.. .| +++++.+.+.....+.|..+.++|.+.|+.
T Consensus 103 ~~~~~~v~~---~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 103 VARAYRVYY---SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHTTTCCE---EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHhcCeEE---EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 677888864 56 677776655555667788888888888765
No 455
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=92.15 E-value=0.64 Score=35.96 Aligned_cols=75 Identities=11% Similarity=0.130 Sum_probs=47.3
Q ss_pred CCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE---ccH-----------------------HHHhhcCCCCC
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT---TSA-----------------------DVAEFFHIHPK 228 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~---~~~-----------------------~~~~~~~i~~~ 228 (378)
+++++|.|+.+||.+.... +.++. ++.+ ++.+..+ ... .+.+.|++..
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 4678889999999875433 33333 3332 2555433 112 2788899886
Q ss_pred CCCCeEEEeecCCCCccccCCCCCHHHHH
Q 017071 229 SKRPALIFLHLEAGKATPFRHQFTRLAIA 257 (378)
Q Consensus 229 ~~~P~i~~~~~~~~~~~~y~g~~~~~~l~ 257 (378)
.|+++++.+++.....+.|..+.++..
T Consensus 114 --~P~~~lid~~G~i~~~~~g~~~~e~~~ 140 (152)
T 2lrt_A 114 --LPSVFLVNRNNELSARGENIKDLDEAI 140 (152)
T ss_dssp --CSEEEEEETTTEEEEETTTCSCHHHHH
T ss_pred --CceEEEECCCCeEEEecCCHHHHHHHH
Confidence 899999976654555667776654443
No 456
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=91.84 E-value=0.71 Score=36.95 Aligned_cols=84 Identities=7% Similarity=0.039 Sum_probs=51.1
Q ss_pred CCeEEEEEEcCCCCccHH---HHHHHh-ccC-CceeEEEE---cc-----HHHHhhcCCCCC------------------
Q 017071 180 ESKLVLGFLHDLEGMESE---ELAAAS-KLH-SDVNFYQT---TS-----ADVAEFFHIHPK------------------ 228 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~---~~~~~a-~~~-~~~~f~~~---~~-----~~~~~~~~i~~~------------------ 228 (378)
+++++|.|+.+||.+... .+.++. ++. .++.+..+ .+ ....++++++..
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 567888999999986443 344443 333 35555543 12 345566666410
Q ss_pred --CCCCeEEEeecCCCCccccCCCC--CHHHHHHHHHhc
Q 017071 229 --SKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTHT 263 (378)
Q Consensus 229 --~~~P~i~~~~~~~~~~~~y~g~~--~~~~l~~fi~~~ 263 (378)
...|+++++..++.....+.|.. +.+++.++|+..
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 14799998876554555666764 367888888753
No 457
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=91.61 E-value=0.43 Score=36.29 Aligned_cols=77 Identities=12% Similarity=0.130 Sum_probs=46.7
Q ss_pred CCeEEEEEEcCCCCccHHH---HHH---Hh-cc-CCceeEEEE-ccH--H------------------------HHhhcC
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAA---AS-KL-HSDVNFYQT-TSA--D------------------------VAEFFH 224 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~---~a-~~-~~~~~f~~~-~~~--~------------------------~~~~~~ 224 (378)
.++++|.|+++||.+.... +.+ +. .+ ..++.+..+ .+. + +.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 4688889999999875443 333 23 22 234555433 111 1 466778
Q ss_pred CCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.. .|+++++..++ .+.+.+ .+.++|.+||++
T Consensus 111 v~~---~P~~~lid~~G--~i~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 111 LRA---IPTLYLLDKNK--TVLLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp CTT---CSEEEEECTTC--BEEEEE-ECHHHHHHHHHC
T ss_pred CCc---CCeEEEECCCC--cEEecC-CCHHHHHHHHhC
Confidence 875 89999887653 233332 357889988863
No 458
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=91.45 E-value=0.078 Score=43.60 Aligned_cols=65 Identities=12% Similarity=0.205 Sum_probs=42.0
Q ss_pred hhHhhcCCCCCCCcEEEEEcCCCccccCC-CCCCHHHHHHHHHHHhcCce-eeeccCCchh-hhccCCcccccee
Q 017071 302 RVSQEFGVSGNAPRVIAYSARDAKKYVLN-GELTLSSIKSFGEEFLEDKL-LNQSDQISET-ILKLPSQSRASYQ 373 (378)
Q Consensus 302 ~l~~~~gi~~~~~p~i~i~~~~~~~y~~~-~~~~~~~i~~Fi~~~~~Gkl-~~kSe~~p~~-~~~~v~~~~~~~~ 373 (378)
...+.+|+++ .|.++| +.+|... +.++.+++.+|++++++ -+ +++|+++|.. -.-.+|++|..+.
T Consensus 41 ~~a~~~gi~g--vP~fvi----ngk~~~~~~~~~~~~~~~f~~~~~~-l~~~L~s~~~p~~~~~~~~g~~y~~l~ 108 (197)
T 1un2_A 41 KAAADVQLRG--VPAMFV----NGKYQLNPQGMDTSNMDVFVQQYAD-TVKYLSEKKGGGTGAQYEDGKQYTTLE 108 (197)
T ss_dssp HHHHHTTCCS--SSEEEE----TTTEEECGGGSCCSSHHHHHHHHHH-HHHHHTC---------CCBTTTEEECS
T ss_pred HHHHHcCCCc--CCEEEE----cceEecCccccccccHHHHHHHHHH-HHHHHHhCcccccccccCCCCCceEcc
Confidence 3457889975 688876 2345444 46777889999999999 44 9999999987 2246888888764
No 459
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=91.05 E-value=0.18 Score=43.47 Aligned_cols=28 Identities=11% Similarity=0.199 Sum_probs=24.4
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHH
Q 017071 73 NRNVMVMFYANWCYWSKKLAPEFAAAAK 100 (378)
Q Consensus 73 ~~~~lv~F~a~wC~~C~~~~p~~~~~~~ 100 (378)
++.+++.|+-+.||+|+++.+.+++..+
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK 174 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh
Confidence 5688999999999999999999986544
No 460
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=90.92 E-value=0.83 Score=35.92 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=40.3
Q ss_pred CCeEEEEEEcCCCCccHH---HHHHHh-ccCC--ceeEEEE---cc------------------------HHHHhhcCCC
Q 017071 180 ESKLVLGFLHDLEGMESE---ELAAAS-KLHS--DVNFYQT---TS------------------------ADVAEFFHIH 226 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~--~~~f~~~---~~------------------------~~~~~~~~i~ 226 (378)
+++++|.|+++||.+... .+.+++ ++.+ ++.+..+ .+ .++++.|++.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 578899999999987544 344444 3433 5555533 12 5788899998
Q ss_pred CCCCCCeEEEeecC
Q 017071 227 PKSKRPALIFLHLE 240 (378)
Q Consensus 227 ~~~~~P~i~~~~~~ 240 (378)
. +|+++++..+
T Consensus 128 ~---~Pt~~lid~~ 138 (165)
T 3s9f_A 128 S---IPTLIGLNAD 138 (165)
T ss_dssp S---SSEEEEEETT
T ss_pred C---CCEEEEEeCC
Confidence 6 8999999864
No 461
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=90.79 E-value=0.27 Score=47.90 Aligned_cols=68 Identities=19% Similarity=0.228 Sum_probs=45.1
Q ss_pred hcHHHHhcCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc---HH----HHHHcCCCCCcEEEEEeC
Q 017071 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---KD----LAKEYNILAYPTLYLFVA 136 (378)
Q Consensus 64 ~~~~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~---~~----~~~~~~v~~~Pt~~~~~~ 136 (378)
+.+++.+..++ ++.|..+||++|++....+.+. ++.+-.+|++.+ ++ +.+..+...+|.+ |-+
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v--~i~ 78 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQM--FVR 78 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--EET
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHC------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--EEC
Confidence 45666665444 5669999999999999888864 344555665542 23 3345688899987 447
Q ss_pred CeEee
Q 017071 137 GVRQF 141 (378)
Q Consensus 137 g~~~~ 141 (378)
|+.+.
T Consensus 79 g~~ig 83 (598)
T 2x8g_A 79 GKFIG 83 (598)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 75443
No 462
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=90.62 E-value=0.72 Score=36.23 Aligned_cols=83 Identities=12% Similarity=0.044 Sum_probs=52.8
Q ss_pred cCCeEEEEEEcCCCCc-cHHH---HHHHh-ccCC----ceeEEEEc-c------------------------------HH
Q 017071 179 VESKLVLGFLHDLEGM-ESEE---LAAAS-KLHS----DVNFYQTT-S------------------------------AD 218 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~-~~~~---~~~~a-~~~~----~~~f~~~~-~------------------------------~~ 218 (378)
..++++|.|+.+||.+ .... +.++. ++.. ++.+..++ + ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3568899999999997 5444 44444 3332 56665442 1 24
Q ss_pred HHhhcCCCC------------CCCCCeEEEeecCCCCccccCCCC--CHHHHHHHHHh
Q 017071 219 VAEFFHIHP------------KSKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTH 262 (378)
Q Consensus 219 ~~~~~~i~~------------~~~~P~i~~~~~~~~~~~~y~g~~--~~~~l~~fi~~ 262 (378)
+++.|++.. ....|+++++. +......+.|.. +.++|.++|+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 556666420 01269999998 654555667776 88899988875
No 463
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=90.38 E-value=0.87 Score=34.71 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=38.7
Q ss_pred CCeEEEEEEcCCCCccHH---HHHHHh-ccC--CceeEEEE--c-------------------------cHHHHhhcCCC
Q 017071 180 ESKLVLGFLHDLEGMESE---ELAAAS-KLH--SDVNFYQT--T-------------------------SADVAEFFHIH 226 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~---~~~~~a-~~~--~~~~f~~~--~-------------------------~~~~~~~~~i~ 226 (378)
+++++|.|+++||.+... .+.+++ ++. .++.+..+ . +.+++++|++.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 568899999999987543 344444 343 35555543 1 23678899998
Q ss_pred CCCCCCeEEEee
Q 017071 227 PKSKRPALIFLH 238 (378)
Q Consensus 227 ~~~~~P~i~~~~ 238 (378)
. +|+++++.
T Consensus 108 ~---~Pt~~lid 116 (146)
T 1o8x_A 108 S---IPTLIGVD 116 (146)
T ss_dssp S---SSEEEEEE
T ss_pred C---CCEEEEEE
Confidence 6 89999998
No 464
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=90.01 E-value=0.93 Score=34.34 Aligned_cols=56 Identities=18% Similarity=0.187 Sum_probs=38.4
Q ss_pred CCeEEEEEEcCCCCccHH---HHHHHh-ccC--CceeEEEE--c-------------------------cHHHHhhcCCC
Q 017071 180 ESKLVLGFLHDLEGMESE---ELAAAS-KLH--SDVNFYQT--T-------------------------SADVAEFFHIH 226 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~---~~~~~a-~~~--~~~~f~~~--~-------------------------~~~~~~~~~i~ 226 (378)
+++++|.|+++||.+... .+.+++ ++. .++.+..+ . +.++++.|++.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 578899999999997543 344444 333 35555533 1 23578889998
Q ss_pred CCCCCCeEEEee
Q 017071 227 PKSKRPALIFLH 238 (378)
Q Consensus 227 ~~~~~P~i~~~~ 238 (378)
. +|+++++.
T Consensus 108 ~---~Pt~~lid 116 (144)
T 1o73_A 108 S---IPTLITIN 116 (144)
T ss_dssp S---SSEEEEEE
T ss_pred C---CCEEEEEE
Confidence 6 89999998
No 465
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=89.94 E-value=0.99 Score=34.27 Aligned_cols=59 Identities=8% Similarity=0.022 Sum_probs=40.0
Q ss_pred cCCeEEEEEEcCCCCccHH---HHHHHh-ccC--CceeEEEE--c-------------------------cHHHHhhcCC
Q 017071 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLH--SDVNFYQT--T-------------------------SADVAEFFHI 225 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~--~~~~f~~~--~-------------------------~~~~~~~~~i 225 (378)
.+++++|.|+++||.+... .+.+++ ++. .++.+..+ . +.++++.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 3568899999999987543 344444 343 35655543 1 1468889999
Q ss_pred CCCCCCCeEEEee-cC
Q 017071 226 HPKSKRPALIFLH-LE 240 (378)
Q Consensus 226 ~~~~~~P~i~~~~-~~ 240 (378)
.. +|+++++. ++
T Consensus 107 ~~---~P~~~lid~~~ 119 (144)
T 1i5g_A 107 KS---IPTLVGVEADS 119 (144)
T ss_dssp CS---SSEEEEEETTT
T ss_pred CC---CCEEEEEECCC
Confidence 86 89999997 44
No 466
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=89.83 E-value=0.99 Score=32.74 Aligned_cols=64 Identities=9% Similarity=0.113 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHhc---C-CcEEEEEeCcCcH----------HHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHH
Q 017071 91 LAPEFAAAAKMLK---G-EADLVMVDAYLEK----------DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (378)
Q Consensus 91 ~~p~~~~~~~~~~---~-~~~~~~vd~~~~~----------~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (378)
..|++.+++..+. . ++.+.+.|...++ ++.+++|+..+|.+++ ||++ ...-...+.++|.+|+
T Consensus 22 vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGev-v~~G~yPt~eEl~~~l 98 (110)
T 3kgk_A 22 VDQALVDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGET-VMAGRYPKRAELARWF 98 (110)
T ss_dssp --CHHHHHHHHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTEE-EEESSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEE-EEeccCCCHHHHHHHh
Confidence 3444544443332 2 7999999998876 5677899999999866 8843 3333357999999998
Q ss_pred H
Q 017071 157 R 157 (378)
Q Consensus 157 ~ 157 (378)
.
T Consensus 99 g 99 (110)
T 3kgk_A 99 G 99 (110)
T ss_dssp T
T ss_pred C
Confidence 5
No 467
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=89.51 E-value=0.67 Score=33.40 Aligned_cols=62 Identities=18% Similarity=0.146 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhc---C-CcEEEEEeCcCcH----------HHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHH
Q 017071 92 APEFAAAAKMLK---G-EADLVMVDAYLEK----------DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (378)
Q Consensus 92 ~p~~~~~~~~~~---~-~~~~~~vd~~~~~----------~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (378)
.|++.+++..+. . ++.+.+.|...++ ++.+++|+..+|.+++ +|++ ...-...+.++|.+|+
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DGev-v~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DGEI-AVSQTYPTTKQMSEWT 101 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TTEE-EECSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEE-EEeccCCCHHHHHHHh
Confidence 555555544332 2 7889999998776 5667899999999866 8843 3333357899999887
No 468
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=88.80 E-value=0.84 Score=34.66 Aligned_cols=76 Identities=9% Similarity=0.124 Sum_probs=46.0
Q ss_pred CCeEEEEEEcCCCCccHHH---HHHHh-ccC-CceeEEEE-cc----------------------------HHHHhhcCC
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAAAS-KLH-SDVNFYQT-TS----------------------------ADVAEFFHI 225 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~~a-~~~-~~~~f~~~-~~----------------------------~~~~~~~~i 225 (378)
+++++|.|+++||.+.... +.++. ++. .++.+..+ .+ .++++.|++
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 5788999999999985554 44444 333 23555432 11 246677888
Q ss_pred CCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHH
Q 017071 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (378)
Q Consensus 226 ~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~ 261 (378)
.. .|+.+++.+++. +.+.+ ...+++.++|+
T Consensus 112 ~~---~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 112 RK---GFKNFLINDEGV--IIAAN-VTPEKLTEILK 141 (143)
T ss_dssp GG---CCCEEEECTTSB--EEEES-CCHHHHHHHHT
T ss_pred CC---CCcEEEECCCCE--EEEcc-CCHHHHHHHHH
Confidence 75 898888875432 22221 34567777765
No 469
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=88.21 E-value=0.44 Score=36.20 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=26.6
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~ 116 (378)
+..|+.+||+.|++....+++. ++.+-.+|++++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 5568899999999988888763 566777787765
No 470
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=87.40 E-value=0.29 Score=39.67 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=32.6
Q ss_pred cHHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 116 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
+...++++||.|+||+++ +|+......|..+.+.+.+.|...+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 345678899999999655 7754434458889999999998765
No 471
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=87.37 E-value=1 Score=37.18 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=29.8
Q ss_pred HHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 217 ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 217 ~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
.++++++|+++ .|++++ .++ + .+.|..+.+.|.++|...
T Consensus 171 ~~l~~~~gV~g---TPt~vi-~nG--~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 171 YELGIQFGVRG---TPSIVT-STG--E--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp HHHHHHHTCCS---SCEEEC-TTS--C--CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHcCCCc---CCEEEE-eCC--E--EecCCCCHHHHHHHHHhc
Confidence 34667889986 899986 433 2 567888999999999865
No 472
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=87.01 E-value=1.7 Score=36.00 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=47.1
Q ss_pred eEEEEEEcCCCCc---cHHHHHHHh-ccCCc-eeEEEEc--------------------------------cHHHHhhcC
Q 017071 182 KLVLGFLHDLEGM---ESEELAAAS-KLHSD-VNFYQTT--------------------------------SADVAEFFH 224 (378)
Q Consensus 182 ~~~v~f~~~~~~~---~~~~~~~~a-~~~~~-~~f~~~~--------------------------------~~~~~~~~~ 224 (378)
+++|.|+.+||.+ ....+.++. ++.++ +.|..+. +.++++.|+
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 5788888999875 444555544 44332 5554332 347888899
Q ss_pred CCCCCCCCeEEEeecCCCCccccCC-----------CCCHHHHHHHHHh
Q 017071 225 IHPKSKRPALIFLHLEAGKATPFRH-----------QFTRLAIANFVTH 262 (378)
Q Consensus 225 i~~~~~~P~i~~~~~~~~~~~~y~g-----------~~~~~~l~~fi~~ 262 (378)
+.. .|+++++..+. .+.|.| ..+.++|.+.|+.
T Consensus 141 v~~---~P~~~liD~~G--~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 141 AAC---TPDFFLYDRER--RLVYHGQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp CCE---ESEEEEECTTC--BEEEEECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred CCC---CCeEEEECCCC--cEEEeccccccccccccccCHHHHHHHHHH
Confidence 886 89999996543 223433 2345667766654
No 473
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=86.55 E-value=1.7 Score=35.12 Aligned_cols=82 Identities=7% Similarity=0.011 Sum_probs=50.3
Q ss_pred CCeEEEEEE-cCCCCccHHHHH---HHh-ccCC-ceeEEEE----------------------------ccHHHHhhcCC
Q 017071 180 ESKLVLGFL-HDLEGMESEELA---AAS-KLHS-DVNFYQT----------------------------TSADVAEFFHI 225 (378)
Q Consensus 180 ~~~~~v~f~-~~~~~~~~~~~~---~~a-~~~~-~~~f~~~----------------------------~~~~~~~~~~i 225 (378)
.++++|.|+ .+||.+...... ++. ++.. ++.+..+ .+.++++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 467888888 899987544433 322 2222 3444322 23456777887
Q ss_pred C-----CCCCCCeEEEeecCCCCccccCCCC----CHHHHHHHHHhcC
Q 017071 226 H-----PKSKRPALIFLHLEAGKATPFRHQF----TRLAIANFVTHTK 264 (378)
Q Consensus 226 ~-----~~~~~P~i~~~~~~~~~~~~y~g~~----~~~~l~~fi~~~~ 264 (378)
. . .|+++++.+.......+.|.. +.++|.++|+...
T Consensus 125 ~~~~g~~---~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 125 LNADGVA---DRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BCTTSSB---CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccCCCc---cceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 6 4 799998876544444444543 6788888888654
No 474
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=85.74 E-value=2.8 Score=33.64 Aligned_cols=30 Identities=7% Similarity=0.025 Sum_probs=19.4
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.+++.+.+.....+.|..+.++|.++|+.
T Consensus 153 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 182 (190)
T 2vup_A 153 TSFLIDRDGVPVERFSPGASVKDIEKKLIP 182 (190)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 666665544445556677777777777764
No 475
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=85.68 E-value=0.52 Score=31.92 Aligned_cols=50 Identities=20% Similarity=0.093 Sum_probs=33.2
Q ss_pred EEEEEcCCCCccHHH---HHHHh-ccCCceeEEEEc----cHHHHhhcCCCCCCCCCeEEE
Q 017071 184 VLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQTT----SADVAEFFHIHPKSKRPALIF 236 (378)
Q Consensus 184 ~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~~----~~~~~~~~~i~~~~~~P~i~~ 236 (378)
++.|+.+||.+.... +.+++ +...++.+..+. +.++++++|+.. .|++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~---vPt~~i 61 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKS---VPALVI 61 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCE---EEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCc---CCEEEE
Confidence 567899999875443 33344 333345555543 567889999986 899886
No 476
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=85.42 E-value=0.82 Score=37.13 Aligned_cols=45 Identities=2% Similarity=0.062 Sum_probs=29.4
Q ss_pred cHHHHhhcCCC-----CCCCCCeEEEeecCCCCccccCCCC----CHHHHHHHHHhc
Q 017071 216 SADVAEFFHIH-----PKSKRPALIFLHLEAGKATPFRHQF----TRLAIANFVTHT 263 (378)
Q Consensus 216 ~~~~~~~~~i~-----~~~~~P~i~~~~~~~~~~~~y~g~~----~~~~l~~fi~~~ 263 (378)
+.++++.|++. . .|+.+++.+++.-...+.|.. +.++|.+.|+..
T Consensus 106 ~~~~~~~~~v~~~~g~~---~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 106 TKSISRDYDVLFEEAIA---LRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp TSHHHHHTTCEETTTEE---CEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCcccCCcc---cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 45677888876 4 798888876544444444543 567788887753
No 477
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=84.96 E-value=3.2 Score=32.20 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=22.4
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT 214 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~ 214 (378)
..++++|.|+.+||.+.... +.++. ++.+ .+.+..+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF 71 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE
Confidence 35788999999999975443 33333 3333 3666544
No 478
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=84.16 E-value=2.1 Score=31.11 Aligned_cols=36 Identities=28% Similarity=0.562 Sum_probs=29.3
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeC
Q 017071 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (378)
Q Consensus 74 ~~~lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~ 113 (378)
|.++|.|.-|-|+-|......+.+ +.++..+.+||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~----ledeY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEE----LKSEYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHT----TTTTEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHH----hhccccEEEEEe
Confidence 568999999999999998888744 445566889986
No 479
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=83.50 E-value=1.1 Score=33.39 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=26.2
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~ 116 (378)
+..|+.++|+.|++....+++. ++.+-.+|..++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~------gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH------DVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHHc------CCCeEEEecccC
Confidence 4567899999999998887652 577777887654
No 480
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=83.34 E-value=1.6 Score=36.08 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=28.6
Q ss_pred HHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 217 ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 217 ~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
.++++++|+.. .|+++ +.++ ..+.|..+.+.|.++|...
T Consensus 171 ~~l~~~~gV~g---tPt~v-~~dG----~~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 171 YALGVQLGVSG---TPAVV-LSNG----TLVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp HHHHHHHTCCS---SSEEE-CTTS----CEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCc---cCEEE-EcCC----eEecCCCCHHHHHHHHHHh
Confidence 45677889986 89985 5433 2567888889999998764
No 481
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=83.08 E-value=1.3 Score=36.11 Aligned_cols=39 Identities=15% Similarity=0.292 Sum_probs=32.2
Q ss_pred HHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHh
Q 017071 117 KDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (378)
Q Consensus 117 ~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (378)
...+.++||.|+||+++ +|+ .+.|....+.+.+.|.+..
T Consensus 157 ~~~a~~~Gv~G~Ptfvi--~g~---~~~G~~~~~~l~~~l~~~~ 195 (203)
T 2imf_A 157 THAAIERKVFGVPTMFL--GDE---MWWGNDRLFMLESAMGRLC 195 (203)
T ss_dssp HHHHHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHHHH
T ss_pred HHHHHHCCCCcCCEEEE--CCE---EEECCCCHHHHHHHHhccc
Confidence 45677899999999877 774 5789999999999988755
No 482
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=82.82 E-value=3.8 Score=32.04 Aligned_cols=30 Identities=0% Similarity=0.022 Sum_probs=20.6
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.+++.+++.....+.|..+.++|.+.|+.
T Consensus 136 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 136 EKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp CEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred eEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 777776555455566787777777777764
No 483
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=82.52 E-value=1.4 Score=35.36 Aligned_cols=47 Identities=9% Similarity=0.004 Sum_probs=28.3
Q ss_pred cHHHHhhcCCCCC---CCCCeEEEeecCCCCccccCCCC----CHHHHHHHHHh
Q 017071 216 SADVAEFFHIHPK---SKRPALIFLHLEAGKATPFRHQF----TRLAIANFVTH 262 (378)
Q Consensus 216 ~~~~~~~~~i~~~---~~~P~i~~~~~~~~~~~~y~g~~----~~~~l~~fi~~ 262 (378)
+.++++.|++... ...|+++++...+.-...+.|.. +.++|.+.|+.
T Consensus 101 ~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 101 SQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred chHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 3457778887610 02799999865543444444542 56777777764
No 484
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=82.16 E-value=4.2 Score=31.27 Aligned_cols=82 Identities=10% Similarity=0.088 Sum_probs=46.3
Q ss_pred CeEEEEEE-cCCCCccHHHH---HHHh-ccC-CceeEEEEc--------------------------cHHHHhhcCCCCC
Q 017071 181 SKLVLGFL-HDLEGMESEEL---AAAS-KLH-SDVNFYQTT--------------------------SADVAEFFHIHPK 228 (378)
Q Consensus 181 ~~~~v~f~-~~~~~~~~~~~---~~~a-~~~-~~~~f~~~~--------------------------~~~~~~~~~i~~~ 228 (378)
++++|.|+ .+||.+..... .++. ++. .++.+..++ +..+.+.|++...
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 37888888 99998755444 3433 332 235554321 4567788888611
Q ss_pred C-CCC--eEEEeecCCCCccccCCCC----CHHHHHHHHHh
Q 017071 229 S-KRP--ALIFLHLEAGKATPFRHQF----TRLAIANFVTH 262 (378)
Q Consensus 229 ~-~~P--~i~~~~~~~~~~~~y~g~~----~~~~l~~fi~~ 262 (378)
. ++| +.+++..++.-...+.|.. ..+++.+.|+.
T Consensus 117 ~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 117 QAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred cCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 0 267 6777765543444455543 34566666553
No 485
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=81.69 E-value=4.2 Score=28.75 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=35.8
Q ss_pred HHHHHhhccCCeEEEEEEcCCCCccHHHHHHHhccCCc---eeEEEEc-c-------HHHHhhcCCCCCCCCCeEE
Q 017071 171 DEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSD---VNFYQTT-S-------ADVAEFFHIHPKSKRPALI 235 (378)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~---~~f~~~~-~-------~~~~~~~~i~~~~~~P~i~ 235 (378)
+.+++.++.+. ++.|+.+||++....-..+...... +.+.-+. + ..+.+.+++.. +|+++
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~---vP~i~ 73 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGART---VPRVF 73 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCC---SCEEE
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCC---cCeEE
Confidence 45566665554 5568999998765444333333222 5554432 2 24677888875 89974
No 486
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=80.94 E-value=1.3 Score=32.56 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=25.8
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~ 116 (378)
+..|+.++|+.|++....+++. ++.+-.+|..++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~------gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH------KVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC------CCceEEEeecCC
Confidence 4567899999999988887762 566777777644
No 487
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=80.87 E-value=1.9 Score=32.01 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=26.4
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~ 116 (378)
+..|+.|+|+.|++....+++- ++.+-.+|..++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~------gi~~~~~di~~~ 38 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL------AWDYDAIDIKKN 38 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEeccC
Confidence 4567899999999998887753 567777887655
No 488
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=80.55 E-value=1.5 Score=38.79 Aligned_cols=157 Identities=14% Similarity=0.045 Sum_probs=94.9
Q ss_pred CcCcHHHHHHcCCCCCcEEEEEeCCeEeeeeeC-CCCHHHHHHHHHHHhcCCcccCCCHHHHHH----hhccCCeEEEEE
Q 017071 113 AYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFG-ERTRDVISAWVREKMTLGTYSITTTDEAER----ILTVESKLVLGF 187 (378)
Q Consensus 113 ~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~----~~~~~~~~~v~f 187 (378)
|+-.+++.++++|.-+|-.+.+++. .. .+| ..+.+++.+.+.+.-..+-+.-.+..++.+ +++..+.++...
T Consensus 45 ~dL~~e~~~~~~I~vvPL~v~~~~~-~Y--~D~~di~~~efy~~m~~~~~~p~TSqPs~~~~~~~fe~l~~~~~~Ii~I~ 121 (315)
T 3fys_A 45 AYIPKEMREQHQIHMIPLQVVFREE-TY--REEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIH 121 (315)
T ss_dssp GCCCHHHHHHHTEEEECCEEECSSC-EE--EBTTTBCHHHHHHHHHTTTCCCEEECCCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCHHHHHhCCeEEEeEEEEECCE-EE--ECCCCCCHHHHHHHHHhCCCCcccCCCCHHHHHHHHHHHHhcCCcEEEEe
Confidence 4456788999999999998888543 32 233 588999999997643233333345555444 444455555555
Q ss_pred EcCCCCccHHHHHHHhccCCceeEEEEccHHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHhcCCCc
Q 017071 188 LHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (378)
Q Consensus 188 ~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~P~ 267 (378)
+++.-+..++....+++...+.++..+.+..+.-..+. ++.+-. ...=.|..+.+++.+|+++...-.
T Consensus 122 iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~---------lv~~Aa---~l~~~G~~s~eeI~~~l~~~~~~~ 189 (315)
T 3fys_A 122 LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGF---------YALKAA---ELIKNGASSPEDIIKELEEMKKTV 189 (315)
T ss_dssp SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHH---------HHHHHH---HHHHTTCCCHHHHHHHHHHHTTTC
T ss_pred CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHH---------HHHHHH---HHHHcCCCCHHHHHHHHHHHHhcc
Confidence 66666667777777775555455555443322222221 001000 000023338899999999988777
Q ss_pred eEEecccchhhhhccch
Q 017071 268 VVTLTIHNAQFVFQDPR 284 (378)
Q Consensus 268 ~~~l~~~~~~~~~~~~~ 284 (378)
-.-+..+++..+...++
T Consensus 190 ~~~f~v~~L~yL~kGGR 206 (315)
T 3fys_A 190 RAYFMVDDLAHLQRGGR 206 (315)
T ss_dssp EEEEECSCTHHHHHHTT
T ss_pred EEEEEECchHHHHhCCc
Confidence 77788888877777665
No 489
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=80.54 E-value=7.5 Score=29.97 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=21.4
Q ss_pred CCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT 214 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~ 214 (378)
.++++|.|+.+||.+.... +.++. ++.+ .+.+..+
T Consensus 31 gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 70 (169)
T 2v1m_A 31 GHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAF 70 (169)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 5688899999999975443 33333 3332 3555543
No 490
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=79.44 E-value=2.6 Score=35.46 Aligned_cols=42 Identities=12% Similarity=0.164 Sum_probs=33.7
Q ss_pred HHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHHHhcC
Q 017071 117 KDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (378)
Q Consensus 117 ~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (378)
...+.++||.|+||+++ +|+ ..+.|..+.+.+.+.|.+.+..
T Consensus 173 ~~~a~~~Gv~GvPtfvv--~g~--~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 173 EREAAQLGATGVPFFVL--DRA--YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHHTTCCSSSEEEE--TTT--EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCeeCeEEE--CCc--EeecCCCCHHHHHHHHHHHHhh
Confidence 34567899999999987 664 3458999999999999988753
No 491
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=79.03 E-value=10 Score=30.12 Aligned_cols=31 Identities=6% Similarity=0.011 Sum_probs=21.2
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHhc
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (378)
+.+++.+++.-...+.|..+.++|.+.|+..
T Consensus 151 ~~~liD~~G~i~~~~~g~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFSPGASVKDIEEKLIPL 181 (187)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Confidence 7777765554555667777788888887653
No 492
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=77.94 E-value=6 Score=27.11 Aligned_cols=68 Identities=10% Similarity=0.024 Sum_probs=43.7
Q ss_pred EEEEEcCCCCccHHHHHHHhccCCceeEEEEc------c----HHHHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCH
Q 017071 184 VLGFLHDLEGMESEELAAASKLHSDVNFYQTT------S----ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR 253 (378)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~------~----~~~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~ 253 (378)
++.|..++|.+....-..+..+.-.+.+..+. . .++.+.++... .|++++ .+ . .-|.++.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~---vP~l~~--~g--~---~i~G~~~ 83 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYS---VPVVVK--GD--K---HVLGYNE 83 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSC---SCEEEE--TT--E---EEESCCH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCC---cCEEEE--CC--E---EEeCCCH
Confidence 45688999988766555555554455554443 2 45567778765 899886 22 2 2244688
Q ss_pred HHHHHHHH
Q 017071 254 LAIANFVT 261 (378)
Q Consensus 254 ~~l~~fi~ 261 (378)
+.|.+|+.
T Consensus 84 ~~l~~~l~ 91 (92)
T 3ic4_A 84 EKLKELIR 91 (92)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999885
No 493
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=76.68 E-value=12 Score=29.12 Aligned_cols=35 Identities=9% Similarity=0.160 Sum_probs=26.3
Q ss_pred HHhhcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 219 VAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 219 ~~~~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
++.++|+.+ .|++++ .+ ..+.|..+.+.|.++|..
T Consensus 136 ~a~~~gv~g---tPt~~i--~g----~~~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 136 LAQKLGFNG---TPSFVV--ED----ALVPGFVEQSQLQDAVDR 170 (175)
T ss_dssp HHHHHTCCS---SSEEEE--TT----EEECSCCCHHHHHHHHHH
T ss_pred HHHHcCCcc---CCEEEE--CC----EEeeCCCCHHHHHHHHHH
Confidence 456788886 899987 22 266788888999998875
No 494
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=76.51 E-value=2.5 Score=34.51 Aligned_cols=37 Identities=19% Similarity=0.442 Sum_probs=29.7
Q ss_pred HHHHHHcCCCCCcEEEEEeCCeEeeeeeCCCCHHHHHHHHHH
Q 017071 117 KDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (378)
Q Consensus 117 ~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (378)
...+.++||.|+||+++ +|+ .+.|....+.+.++|..
T Consensus 163 ~~~a~~~Gv~GvPtfvv--~g~---~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDAVARGIFGSPFFLV--DDE---PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHT
T ss_pred HHHHHHCCCCcCCEEEE--CCE---EEecCCCHHHHHHHHhc
Confidence 34567899999999987 774 67899888888888763
No 495
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=76.25 E-value=14 Score=28.94 Aligned_cols=36 Identities=3% Similarity=-0.066 Sum_probs=22.9
Q ss_pred cCCeEEEEEEcCCCCccHHH---HHHHh-ccCCc-eeEEEE
Q 017071 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHSD-VNFYQT 214 (378)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~-~~f~~~ 214 (378)
..++++|.|+.+||.+.... +.++. ++.++ +.+..+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 35688999999999985544 44444 44443 555543
No 496
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=75.96 E-value=7.3 Score=30.80 Aligned_cols=35 Identities=6% Similarity=0.006 Sum_probs=21.3
Q ss_pred CCeEEEEEEcCCCCccHHH---HHHHh-ccCC-ceeEEEE
Q 017071 180 ESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT 214 (378)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~ 214 (378)
.++++|.|+.+||.+.... +.++. ++.. .+.+..+
T Consensus 47 gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 47 GFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 5688899999999875443 33333 3332 3555544
No 497
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=75.72 E-value=10 Score=24.44 Aligned_cols=68 Identities=7% Similarity=-0.002 Sum_probs=40.3
Q ss_pred EEEEEcCCCCccHHHHHHHhccCCceeEEEE-ccHHHHh---hcCCCCCCCCCeEEEeecCCCCccccCCCCCHHHHHHH
Q 017071 184 VLGFLHDLEGMESEELAAASKLHSDVNFYQT-TSADVAE---FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANF 259 (378)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-~~~~~~~---~~~i~~~~~~P~i~~~~~~~~~~~~y~g~~~~~~l~~f 259 (378)
++.|+.+||.+....-..+....-.+...-+ .++++.+ ++++.. .|++++ ++ .. . +.++.+.|.+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~i~~~~~di~~~~~~~~~~~~~~~~~---vP~l~~--~g--~~--~-~g~~~~~l~~~ 72 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQ---APVVEV--DG--EH--W-SGFRPERIKQL 72 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHTTCBC---CCEEEE--TT--EE--E-ESCCHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCc---cCEEEE--CC--eE--E-cCCCHHHHHHH
Confidence 4568899998766555444444333333332 3444444 677765 899873 22 22 2 33577888888
Q ss_pred HH
Q 017071 260 VT 261 (378)
Q Consensus 260 i~ 261 (378)
++
T Consensus 73 l~ 74 (75)
T 1r7h_A 73 QA 74 (75)
T ss_dssp HC
T ss_pred Hh
Confidence 74
No 498
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=74.05 E-value=2 Score=31.89 Aligned_cols=34 Identities=6% Similarity=-0.065 Sum_probs=25.4
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCcEEEEEeCcCc
Q 017071 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (378)
Q Consensus 77 lv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~ 116 (378)
+..|+.|+|+.|++....+++- ++.+-.+|..++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~------gi~~~~~di~~~ 39 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN------NIEYTNRLIVDD 39 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCceEEEecccC
Confidence 4567899999999988877652 566666777554
No 499
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=73.94 E-value=10 Score=30.51 Aligned_cols=30 Identities=3% Similarity=0.073 Sum_probs=17.2
Q ss_pred eEEEeecCCCCccccCCCCCHHHHHHHHHh
Q 017071 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (378)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (378)
+.+++.+.+.-...+.|..+.+.+.+.|..
T Consensus 147 ~~~liD~~G~i~~~~~g~~~~~~~~~~i~~ 176 (200)
T 2b7k_A 147 FFYLMDPEGQFVDALGRNYDEKTGVDKIVE 176 (200)
T ss_dssp CEEEECTTSCEEEEECTTCCTTHHHHHHHH
T ss_pred eEEEECCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 556666555455556666665555555543
No 500
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=73.23 E-value=10 Score=29.15 Aligned_cols=46 Identities=4% Similarity=-0.016 Sum_probs=27.1
Q ss_pred cHHHHhhcCCCCC-CCCCeEEEeecCCCCccccCCCC----CHHHHHHHHH
Q 017071 216 SADVAEFFHIHPK-SKRPALIFLHLEAGKATPFRHQF----TRLAIANFVT 261 (378)
Q Consensus 216 ~~~~~~~~~i~~~-~~~P~i~~~~~~~~~~~~y~g~~----~~~~l~~fi~ 261 (378)
+.++++.|++... ...|+.+++.+++.-...+.|.. ..+++.+.|+
T Consensus 95 ~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 95 DKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp TSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred cHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 4577888888620 11698888876554445566632 2345555554
Done!