Your job contains 1 sequence.
>017072
MGKKTSYKRLKGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICD
DCVVEINETGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRG
ITNDPKDPSVDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMA
VRWLDEGMVKRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSP
GYGISLVAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAK
GGVVDSTHQGLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPSTGT
VILRCVGCGYKNLSRKLS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017072
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956443 - symbol:AT5G22100 species:3702 "Ara... 1370 4.9e-140 1
DICTYBASE|DDB_G0282803 - symbol:rcl1 "RNA 3'-terminal pho... 891 2.8e-89 1
UNIPROTKB|Q9Y2P8 - symbol:RCL1 "RNA 3'-terminal phosphate... 860 5.4e-86 1
UNIPROTKB|G3V7Z1 - symbol:Rcl1 "Protein Rcl1" species:101... 860 5.4e-86 1
UNIPROTKB|Q2KHX8 - symbol:RCL1 "RNA 3'-terminal phosphate... 858 8.9e-86 1
MGI|MGI:1913275 - symbol:Rcl1 "RNA terminal phosphate cyc... 856 1.4e-85 1
UNIPROTKB|F1SK46 - symbol:RCL1 "Uncharacterized protein" ... 851 4.9e-85 1
UNIPROTKB|E2RAG1 - symbol:RCL1 "Uncharacterized protein" ... 847 1.3e-84 1
UNIPROTKB|E1C1K6 - symbol:RCL1 "Uncharacterized protein" ... 846 1.7e-84 1
ZFIN|ZDB-GENE-040930-11 - symbol:rcl1 "RNA terminal phosp... 828 1.3e-82 1
FB|FBgn0020909 - symbol:Rtc1 "Rtc1" species:7227 "Drosoph... 735 9.6e-73 1
POMBASE|SPAC12G12.06c - symbol:SPAC12G12.06c "rRNA proces... 678 1.1e-66 1
WB|WBGene00022852 - symbol:ZK1127.5 species:6239 "Caenorh... 579 3.3e-56 1
SGD|S000005370 - symbol:RCL1 "Endonuclease that cleaves p... 537 9.2e-52 1
CGD|CAL0001795 - symbol:RCL1 species:5476 "Candida albica... 528 8.3e-51 1
UNIPROTKB|F1LRB6 - symbol:Rcl1 "Protein Rcl1" species:101... 293 4.2e-49 2
RGD|1305320 - symbol:Rcl1 "RNA terminal phosphate cyclase... 293 9.0e-49 2
UNIPROTKB|G4MZF3 - symbol:MGG_04422 "18S rRNA biogenesis ... 281 3.2e-43 2
UNIPROTKB|Q5VZU3 - symbol:RCL1 "RNA 3'-terminal phosphate... 428 3.3e-40 1
UNIPROTKB|Q5VZU1 - symbol:RCL1 "RCL1" species:9606 "Homo ... 379 5.1e-35 1
ASPGD|ASPL0000041674 - symbol:AN1474 species:162425 "Emer... 343 3.3e-31 1
GENEDB_PFALCIPARUM|PF14_0677 - symbol:PF14_0677 "RNA 3'-T... 257 4.6e-29 2
UNIPROTKB|Q8I717 - symbol:PF14_0677 "RNA 3'-Terminal Phos... 257 4.6e-29 2
UNIPROTKB|Q5VYW8 - symbol:RCL1 "RNA 3'-terminal phosphate... 313 5.0e-28 1
UNIPROTKB|Q5VZU2 - symbol:RCL1 "RNA 3'-terminal phosphate... 312 6.4e-28 1
RGD|1303111 - symbol:Rtcd1 "RNA terminal phosphate cyclas... 265 2.0e-22 1
UNIPROTKB|F1S564 - symbol:RTCA "Uncharacterized protein" ... 227 6.3e-22 2
MGI|MGI:1913618 - symbol:Rtca "RNA 3'-terminal phosphate ... 260 2.0e-21 1
UNIPROTKB|Q2HJ88 - symbol:RTCA "RNA 3'-terminal phosphate... 259 2.9e-21 1
ZFIN|ZDB-GENE-030131-9687 - symbol:rtca "RNA 3'-terminal ... 257 5.2e-21 1
UNIPROTKB|E1C1Y0 - symbol:RTCD1 "Uncharacterized protein"... 252 3.6e-20 1
UNIPROTKB|E2RQG6 - symbol:RTCA "Uncharacterized protein" ... 259 3.9e-20 1
UNIPROTKB|O00442 - symbol:RTCA "RNA 3'-terminal phosphate... 250 7.5e-20 1
UNIPROTKB|P46849 - symbol:rtcA "RNA 3'-terminal phosphate... 200 9.9e-14 1
FB|FBgn0025630 - symbol:CG4061 species:7227 "Drosophila m... 192 1.2e-12 1
DICTYBASE|DDB_G0276159 - symbol:rtc1 "RNA 3'-terminal pho... 192 2.0e-12 1
>TAIR|locus:504956443 [details] [associations]
symbol:AT5G22100 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003824 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL589883 EMBL:BT002059 IPI:IPI00532522
RefSeq:NP_680196.1 UniGene:At.44338 UniGene:At.45633
ProteinModelPortal:Q9C578 SMR:Q9C578 STRING:Q9C578 PaxDb:Q9C578
PRIDE:Q9C578 EnsemblPlants:AT5G22100.1 GeneID:832271
KEGG:ath:AT5G22100 TAIR:At5g22100 eggNOG:COG0430
HOGENOM:HOG000157670 InParanoid:Q9C578 KO:K11108 OMA:FMKHPLR
PhylomeDB:Q9C578 ProtClustDB:CLSN2690185 Genevestigator:Q9C578
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 Uniprot:Q9C578
Length = 375
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 263/372 (70%), Positives = 314/372 (84%)
Query: 8 KRLKGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEIN 67
K++KGSQS RQRL+LSTL+STP+ ID+IRAD+T+PGLRPHE++LLRLLE + DD VV+IN
Sbjct: 5 KKMKGSQSFRQRLLLSTLSSTPISIDEIRADETIPGLRPHEVNLLRLLEIVTDDAVVDIN 64
Query: 68 ETGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKD 127
ETGT L+YKPG ++GG+NLVH C +SRSIGY+LEPL+L+GLF KKP+SIRL+GITNDP+D
Sbjct: 65 ETGTRLKYKPGTIVGGKNLVHSCSLSRSIGYYLEPLLLLGLFGKKPLSIRLKGITNDPRD 124
Query: 128 PSVDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEG 187
SVDTFRSTTL ++KRFGVP+E LELKIE+RG P+GGGEV+LT+P + L AV W++EG
Sbjct: 125 ASVDTFRSTTLNIIKRFGVPAEDLELKIEARGVAPNGGGEVLLTVPNIKTLSAVHWVEEG 184
Query: 188 MVKRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLV 247
MVK+IRG +FSTRV+S FE+SM AARGIFN LLPDVHIF DHRAG QAGKSPGYGISL
Sbjct: 185 MVKKIRGTTFSTRVTSDFEHSMRFAARGIFNNLLPDVHIFQDHRAGAQAGKSPGYGISLA 244
Query: 248 AETTSGCFISVDTAVSYAR-GEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDS 306
AETT+GCFIS DT VS R E E++ EK+E P ++ G ++AS LL+EI KGGVVDS
Sbjct: 245 AETTTGCFISADTTVSCERPDETGELDV-EKKERSPAEDTGVEVASWLLQEIEKGGVVDS 303
Query: 307 THQGLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPSTGTVILRCV 366
THQGLLFLLCALSE DVSKVRVG LSPY +E LRNI +FL ++F I PDP TGTVIL+C
Sbjct: 304 THQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIKEFLGVKFAIKPDPLTGTVILKCT 363
Query: 367 GCGYKNLSRKLS 378
G G NLSRKLS
Sbjct: 364 GSGLINLSRKLS 375
>DICTYBASE|DDB_G0282803 [details] [associations]
symbol:rcl1 "RNA 3'-terminal phosphate cyclase family
protein" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 dictyBase:DDB_G0282803
GO:GO:0045335 GO:GO:0003824 GO:GO:0005730 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 eggNOG:COG0430 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 RefSeq:XP_640201.2 ProteinModelPortal:Q54S38
STRING:Q54S38 EnsemblProtists:DDB0238227 GeneID:8623741
KEGG:ddi:DDB_G0282803 OMA:FISANTA ProtClustDB:CLSZ2430476
Uniprot:Q54S38
Length = 371
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 166/367 (45%), Positives = 248/367 (67%)
Query: 9 RLKGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINE 68
+ +GS RQR++ STL+ + I +IR +D PGLR +E S LRL+++I + +EIN
Sbjct: 3 KFQGSTHFRQRIICSTLSGKAIRITNIRDEDEKPGLRDYEASFLRLVDKITNGSKIEINS 62
Query: 69 TGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDP 128
TGT++ Y PGI++GG+ + H+CG R IGYF+E LI +G FAK P+ I L GITN+ D
Sbjct: 63 TGTQITYIPGIIIGGKGITHECGTVRGIGYFVEALICLGPFAKAPLDITLNGITNNDIDL 122
Query: 129 SVDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGM 188
++DT R+TTLP++++FG+ EGL +KI RG+PP+GGG V PIV L A++ +DEG
Sbjct: 123 TIDTIRTTTLPIIRKFGI-EEGLIIKIIKRGAPPNGGGSVNFKCPIVPHLKAIQLIDEGK 181
Query: 189 VKRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVA 248
++RIRG++++TR+S QF N ++ A+G+ PDV+I +DH G ++G SPGYG++LVA
Sbjct: 182 IRRIRGIAYATRISPQFSNRVLDKAKGLLLEYTPDVYISSDHYKGNESGLSPGYGLTLVA 241
Query: 249 ETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTH 308
ETT+GC +S + + ++ +K P+++GE+ A LLEEI GG +DS +
Sbjct: 242 ETTTGCCLSAECMSNTGIATTEQQLQKQKSTSETPEDLGERTAFALLEEIFNGGCIDSHN 301
Query: 309 QGLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPSTGTVILRCVGC 368
Q L L L D+SKVR+GK++PY IE +R + DF + F I PD ++ TV+ C+G
Sbjct: 302 QSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDFFGVTFKIEPDQNSKTVLFTCLGI 361
Query: 369 GYKNLSR 375
GYKN++R
Sbjct: 362 GYKNMAR 368
>UNIPROTKB|Q9Y2P8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
EMBL:AJ276894 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
EMBL:CH471071 SUPFAM:SSF55205 EMBL:AL353151 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 CTD:10171 HOVERGEN:HBG014327 OrthoDB:EOG4X97H9
EMBL:AK022904 EMBL:AL158147 EMBL:BC001025 EMBL:AF067172
EMBL:AF161456 IPI:IPI00294229 RefSeq:NP_005763.3 UniGene:Hs.194121
ProteinModelPortal:Q9Y2P8 SMR:Q9Y2P8 STRING:Q9Y2P8
PhosphoSite:Q9Y2P8 DMDM:90103518 PaxDb:Q9Y2P8 PeptideAtlas:Q9Y2P8
PRIDE:Q9Y2P8 DNASU:10171 Ensembl:ENST00000381750 GeneID:10171
KEGG:hsa:10171 UCSC:uc003zis.2 GeneCards:GC09P004782
HGNC:HGNC:17687 MIM:611405 neXtProt:NX_Q9Y2P8 PharmGKB:PA134894364
InParanoid:Q9Y2P8 PhylomeDB:Q9Y2P8 ChiTaRS:RCL1 GenomeRNAi:10171
NextBio:38512 ArrayExpress:Q9Y2P8 Bgee:Q9Y2P8 CleanEx:HS_RCL1
Genevestigator:Q9Y2P8 GO:GO:0003963 Uniprot:Q9Y2P8
Length = 373
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 182/372 (48%), Positives = 241/372 (64%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ PV I IRA D PGLR E S +RLL++I + +EIN+TGT
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG ++ HDC V R IGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 72 TLYYQPGLLYGG-SVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
++T LPLLK+FG+ E ELKI RG PP GGGEV+ + P+ L ++ D G +KR
Sbjct: 131 VLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 190
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG+++S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETT
Sbjct: 191 IRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETT 250
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
SG F+S + A S +G+ + P+++G A LLEEI +GG VDST+Q L
Sbjct: 251 SGTFLSAELA-SNPQGQGAAVL---------PEDLGRNCARLLLEEIYRGGCVDSTNQSL 300
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRC 365
LL L + DVSKV +G LSPY IE LR++ F I F I P G V++ C
Sbjct: 301 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTC 360
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ L
Sbjct: 361 VGIGFSNLSKTL 372
>UNIPROTKB|G3V7Z1 [details] [associations]
symbol:Rcl1 "Protein Rcl1" species:10116 "Rattus
norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 EMBL:CH473953 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
Ensembl:ENSRNOT00000020809 Uniprot:G3V7Z1
Length = 373
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 181/372 (48%), Positives = 242/372 (65%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ PV I IRA D PGLR E S +RLL++I + +EIN+TGT
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG ++ HDC V R IGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 72 TLYYQPGLLYGG-SVEHDCSVLRGIGYYLEALLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
++T LPLLK+FG+ E ELKI RG PP GGGEV+ + P+ L V+ D G +KR
Sbjct: 131 VLKATALPLLKQFGIDGESFELKILRRGMPPGGGGEVLFSCPVRKVLKPVQLTDPGKIKR 190
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG+++S RVS Q N ++ +ARGI N+ +PD++I+TDH G +GKSPG+G+SLVAETT
Sbjct: 191 IRGMAYSVRVSPQMANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETT 250
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
+G F+S + A S +G+ + P+++G A LLEEI +GG VDST Q L
Sbjct: 251 NGTFLSAELA-SNPQGQGAAVL---------PEDLGRNCAKLLLEEIYRGGCVDSTSQSL 300
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRC 365
+ LL L + DVSKV +G LSPY IE LR++ F + F + P G V++ C
Sbjct: 301 VLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVETKPCGEELKGGDKVLMTC 360
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ L
Sbjct: 361 VGIGFSNLSKTL 372
>UNIPROTKB|Q2KHX8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 EMBL:BC112844 IPI:IPI00702914 RefSeq:NP_001070599.1
UniGene:Bt.27964 ProteinModelPortal:Q2KHX8 STRING:Q2KHX8
PRIDE:Q2KHX8 Ensembl:ENSBTAT00000024840 GeneID:768075
KEGG:bta:768075 CTD:10171 GeneTree:ENSGT00530000063404
HOVERGEN:HBG014327 InParanoid:Q2KHX8 OrthoDB:EOG4X97H9
NextBio:20918430 Uniprot:Q2KHX8
Length = 373
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 180/372 (48%), Positives = 241/372 (64%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ PV I IRA D PGLR E S +RLL+++ + +EIN+TGT
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKVTNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG ++ HDC V R IGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 72 TLYYQPGLLYGG-SMEHDCSVLRGIGYYLESLLCLAPFMKHPLRIVLRGVTNDQVDPSVD 130
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
++T LPLLK+FG+ E ELK+ RG PP GGGEV + P+ L ++ +D G +KR
Sbjct: 131 VLKATALPLLKQFGIDGESFELKVVRRGMPPGGGGEVFFSCPVRKVLKPIQLIDPGKIKR 190
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG+++S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETT
Sbjct: 191 IRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGINSGKSPGFGLSLVAETT 250
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
+G F+S + A S +G+ M P+++G A LLEEI +GG VDST+Q L
Sbjct: 251 NGTFLSAELA-SNPQGQ---------GAAMLPEDLGRNCARLLLEEIYRGGCVDSTNQSL 300
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRC 365
LL L + DVSKV +G LSPY IE LR++ F I F I P G V++ C
Sbjct: 301 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTC 360
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ L
Sbjct: 361 VGIGFSNLSKTL 372
>MGI|MGI:1913275 [details] [associations]
symbol:Rcl1 "RNA terminal phosphate cyclase-like 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003963 "RNA-3'-phosphate cyclase activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=ISA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
MGI:MGI:1913275 EMBL:AJ276895 GO:GO:0003824 GO:GO:0005730
SUPFAM:SSF55205 GO:GO:0006364 eggNOG:COG0430 HOGENOM:HOG000157670
KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
CTD:10171 GeneTree:ENSGT00530000063404 HOVERGEN:HBG014327
OrthoDB:EOG4X97H9 ChiTaRS:RCL1 EMBL:AK009709 EMBL:BC004574
IPI:IPI00122220 RefSeq:NP_067500.1 UniGene:Mm.28630
ProteinModelPortal:Q9JJT0 SMR:Q9JJT0 STRING:Q9JJT0
PhosphoSite:Q9JJT0 PaxDb:Q9JJT0 PRIDE:Q9JJT0
Ensembl:ENSMUST00000064393 GeneID:59028 KEGG:mmu:59028
UCSC:uc008hda.1 InParanoid:Q9JJT0 NextBio:314610 Bgee:Q9JJT0
CleanEx:MM_RCL1 Genevestigator:Q9JJT0 GermOnline:ENSMUSG00000024785
Uniprot:Q9JJT0
Length = 373
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 180/372 (48%), Positives = 242/372 (65%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ PV I IRA D PGLR E S +RLL++I + +EIN+TGT
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG ++ HDC V R IGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 72 TLYYQPGLLYGG-SVEHDCSVLRGIGYYLEALLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
++T LPLLK+FG+ E ELKI RG PP GGGEV+ + P+ L V+ D G +KR
Sbjct: 131 VLKATALPLLKQFGIDGESFELKILRRGMPPGGGGEVLFSCPVRKVLKPVQLTDPGKIKR 190
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG+++S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETT
Sbjct: 191 IRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVSSGKSPGFGLSLVAETT 250
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
+G F+S + A S +G+ + P+++G A LLEEI +GG VDST+Q L
Sbjct: 251 NGTFLSAELA-SNPQGQGAAVL---------PEDLGRNCAKLLLEEIYRGGCVDSTNQSL 300
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRC 365
+ LL L + DVSKV +G LSPY IE LR++ F + F + P G V++ C
Sbjct: 301 VLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVETKPCGEELKGGDKVLMTC 360
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ L
Sbjct: 361 VGIGFSNLSKTL 372
>UNIPROTKB|F1SK46 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 GeneTree:ENSGT00530000063404 EMBL:CU467061
Ensembl:ENSSSCT00000005750 Uniprot:F1SK46
Length = 373
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 181/372 (48%), Positives = 239/372 (64%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ PV I IRA D PGLR E S +RLL++I + +EIN+TGT
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG ++ HDC + RSIGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 72 TLYYQPGLLYGG-SVEHDCSILRSIGYYLESLLCLAPFMKHPLRIVLRGVTNDQVDPSVD 130
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
+ T LPLLK+FG+ E ELKI RG PP GGGEV+ + P+ L ++ D G +KR
Sbjct: 131 VLKVTALPLLKQFGIDGESFELKIVRRGMPPGGGGEVLFSCPVRKVLKPIQLTDPGKIKR 190
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG +S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETT
Sbjct: 191 IRGCRYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETT 250
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
+G F+S + A S +G+ + P+++G A LLEEI +GG VDST+Q L
Sbjct: 251 NGTFLSAELA-SNPQGQGAAVL---------PEDLGRNCARLLLEEIYRGGCVDSTNQSL 300
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRC 365
LL L + DVSKV +G LSPY IE LR++ F I F I P G V++ C
Sbjct: 301 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTC 360
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ L
Sbjct: 361 VGIGFSNLSKTL 372
>UNIPROTKB|E2RAG1 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 CTD:10171
GeneTree:ENSGT00530000063404 EMBL:AAEX03000616 EMBL:AAEX03000617
EMBL:AAEX03000618 RefSeq:XP_541299.3 Ensembl:ENSCAFT00000003309
GeneID:484183 KEGG:cfa:484183 NextBio:20858399 Uniprot:E2RAG1
Length = 373
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 179/372 (48%), Positives = 239/372 (64%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQR VLSTL+ PV I IRA D PGLR E S +RLL+++ + +EIN+TGT
Sbjct: 12 GCNFLRQRQVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKVTNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG ++ HDC V RSIGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 72 TLYYQPGLLYGG-SVEHDCNVLRSIGYYLESLLCLAPFMKHPLRIVLRGVTNDQVDPSVD 130
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
++T LPLLK+FG+ E ELK+ RG PP GGGEV + P+ L ++ D G +KR
Sbjct: 131 VLKATALPLLKQFGIDGESFELKVVRRGMPPGGGGEVFFSCPVRKVLKPIQLTDPGKIKR 190
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG ++S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETT
Sbjct: 191 IRGTAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGINSGKSPGFGLSLVAETT 250
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
+G F+S + A S +G+ + P+++G A LLEEI +GG VDST+Q L
Sbjct: 251 NGTFLSAELA-SNPQGQGAAVL---------PEDLGRNCAKLLLEEIYRGGCVDSTNQSL 300
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRC 365
LL L + DVSKV +G LSPY IE LR++ F I F I P G V++ C
Sbjct: 301 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTC 360
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ L
Sbjct: 361 VGVGFSNLSKTL 372
>UNIPROTKB|E1C1K6 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 CTD:10171
GeneTree:ENSGT00530000063404 EMBL:AADN02066346 EMBL:AADN02066347
EMBL:AADN02066348 IPI:IPI00571045 RefSeq:XP_424808.1
UniGene:Gga.9558 Ensembl:ENSGALT00000024230 GeneID:427222
KEGG:gga:427222 NextBio:20828512 Uniprot:E1C1K6
Length = 374
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 176/372 (47%), Positives = 239/372 (64%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ P+ I IRA + PGLR E +RL++++ + +EIN+TGT
Sbjct: 13 GCNFLRQRLVLSTLSGRPLKIRKIRAKEEDPGLRDFEACFIRLIDKVTNGSRIEINQTGT 72
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
L Y+PG++ GG +L HDC SRSIGY+LE L+ + F K P+ I LRG+TND DPSVD
Sbjct: 73 TLYYQPGLLYGG-SLEHDCSPSRSIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 131
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
++T LPLLK+FG+ E LE+KI RG PP GGGE++ P+ L +++ D G +KR
Sbjct: 132 VLKATALPLLKKFGIDGESLEIKINRRGMPPKGGGEILFACPVRKVLQPIQFTDPGKIKR 191
Query: 192 IRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETT 251
IRG ++S RVS Q N M+ +AR + N+ LPDV+I+TDH G +GKSPG+GI L+AET
Sbjct: 192 IRGTAYSVRVSPQMANRMVESARSVLNKFLPDVYIYTDHMKGISSGKSPGFGICLIAETI 251
Query: 252 SGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGL 311
+G +S + A S +G+ + P+ +G+ A LLEEI +GG VDST+Q L
Sbjct: 252 NGTILSAELA-SNPQGQGAAVL---------PEELGQNCAKLLLEEIYRGGCVDSTNQSL 301
Query: 312 LFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDI-MPDPST---G--TVILRC 365
LL L + DVSKV +G LSPY IE LR++ F I F I M P G V++ C
Sbjct: 302 ALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLRSFFQIMFKIEMKSPEEEHKGGEKVLMTC 361
Query: 366 VGCGYKNLSRKL 377
VG G+ NLS+ +
Sbjct: 362 VGIGFSNLSKTI 373
>ZFIN|ZDB-GENE-040930-11 [details] [associations]
symbol:rcl1 "RNA terminal phosphate cyclase-like 1"
species:7955 "Danio rerio" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 ZFIN:ZDB-GENE-040930-11
GO:GO:0003824 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
CTD:10171 HOVERGEN:HBG014327 EMBL:AY648776 IPI:IPI00500893
RefSeq:NP_001003865.1 UniGene:Dr.31536 ProteinModelPortal:Q6DRI3
STRING:Q6DRI3 PRIDE:Q6DRI3 GeneID:445388 KEGG:dre:445388
NextBio:20832092 ArrayExpress:Q6DRI3 Bgee:Q6DRI3 Uniprot:Q6DRI3
Length = 367
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 169/374 (45%), Positives = 240/374 (64%)
Query: 11 KGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG 70
+G RQRLVLSTL+ PV I +IR+ D PGLR E S +R+L+++ + +EIN+TG
Sbjct: 4 EGCSGFRQRLVLSTLSGKPVKIRNIRSKDDNPGLRDFEASFIRMLDKLTNGTRIEINQTG 63
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
T L Y+PG++ GG ++ H+C V RS+GY+LE L+++ F K PI L+GITN P DPSV
Sbjct: 64 TVLFYQPGLLYGG-SVEHECNVQRSVGYYLEALLMLAPFMKTPIKAVLKGITNHPTDPSV 122
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D + T +PL+KRFG+ +GLE+K+ RG P GGGEV + P+ + V+ + G +K
Sbjct: 123 DLLKVTAVPLMKRFGINGDGLEIKVVKRGMAPGGGGEVHFSCPVSRSMKPVQLTEAGKIK 182
Query: 191 RIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAET 250
RIRG +FS RVS Q N ++ +AR I N+ +PD++I+TDH GP +GKSPG+G+ LVAET
Sbjct: 183 RIRGTAFSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGPNSGKSPGFGLVLVAET 242
Query: 251 TSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQG 310
+G F+ + VS +G+ E+ P+++G A LLEEI +GG VDST+Q
Sbjct: 243 LNGVFLGAEV-VSTPQGQ---------GEMQLPEDLGRNCAKLLLEEIYRGGCVDSTNQS 292
Query: 311 LLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDI---MP--DPSTG--TVIL 363
L L L + +VSK +G LSPY ++ LR+I DF I F I P D G V++
Sbjct: 293 LALLYMTLGQQEVSKTLLGPLSPYTMDFLRHIRDFFQIMFKIETQKPSEDECKGGEKVLM 352
Query: 364 RCVGCGYKNLSRKL 377
CVG GY N+S+ +
Sbjct: 353 TCVGAGYNNISKSI 366
>FB|FBgn0020909 [details] [associations]
symbol:Rtc1 "Rtc1" species:7227 "Drosophila melanogaster"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
GO:GO:0003824 GO:GO:0005730 EMBL:AE014298 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
EMBL:AY058762 EMBL:X04754 EMBL:M15898 RefSeq:NP_572919.1
UniGene:Dm.4106 ProteinModelPortal:P56175 SMR:P56175 STRING:P56175
PaxDb:P56175 EnsemblMetazoa:FBtr0073820 GeneID:32338
KEGG:dme:Dmel_CG11130 UCSC:CG11130-RA CTD:32338 FlyBase:FBgn0020909
InParanoid:P56175 OrthoDB:EOG4CZ8XB PhylomeDB:P56175
GenomeRNAi:32338 NextBio:777999 Bgee:P56175 GermOnline:CG11130
Uniprot:P56175
Length = 384
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 160/379 (42%), Positives = 230/379 (60%)
Query: 11 KGSQSLRQRLVLSTLASTPVLIDDIRADD-TMPGLRPHEISLLRLLERICDDCVVEINET 69
+GS L+QRL+L+ L+ PV I IR++D T PGLR +EISL+RLL++I + +E+N
Sbjct: 14 RGSNFLKQRLILACLSGKPVKISQIRSEDETAPGLREYEISLIRLLDKITNGTKIELNPA 73
Query: 70 GTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPS 129
GT + + PG++ GG+ L HDC V R IGY+L+ LI +G F K P+ LRG+TN PS
Sbjct: 74 GTSVMFSPGLLHGGQ-LNHDCCVQRGIGYYLDALIALGPFCKSPLQCTLRGVTNSKDSPS 132
Query: 130 VDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMV 189
VD + L LLKRF + EGLELK+ RG P GGGE+I P+ L A+++ +GMV
Sbjct: 133 VDHIKGAALSLLKRFLLVDEGLELKVVRRGVAPLGGGEIIFRCPVRKSLRAIQFQSQGMV 192
Query: 190 KRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAE 249
KRIRG ++ +VS N + AA+G + LPDV+I+TD G +G SPG+GI L+AE
Sbjct: 193 KRIRGTVYACKVSPAMANRTVEAAKGCMLKFLPDVYIYTDQNKGKMSGNSPGFGICLIAE 252
Query: 250 TTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQ 309
TT G + D S R E ++ P+N+G+++A LL+EI +GG VDS++Q
Sbjct: 253 TTDGVCFAADCC-SNTREESEDTP-------SIPENLGKEVALRLLDEIYRGGCVDSSYQ 304
Query: 310 GLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIM-PDPST--------GT 360
L L AL + VSK G LS Y + L+++ DF I F + P+ G
Sbjct: 305 WLAALYIALGQKHVSKFLTGALSNYTVHFLQHLRDFFSITFKLENPEAEDEDEAENVRGA 364
Query: 361 --VILRCVGCGYKNLSRKL 377
V++ CVG GY N+++++
Sbjct: 365 QKVLMACVGIGYTNINKRV 383
>POMBASE|SPAC12G12.06c [details] [associations]
symbol:SPAC12G12.06c "rRNA processing protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004521
"endoribonuclease activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
PomBase:SPAC12G12.06c GO:GO:0005783 EMBL:CU329670 GO:GO:0005730
GO:GO:0004521 SUPFAM:SSF55205 GO:GO:0006364 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 PIR:S62537 RefSeq:NP_592892.1
ProteinModelPortal:Q09870 STRING:Q09870
EnsemblFungi:SPAC12G12.06c.1 GeneID:2542936 KEGG:spo:SPAC12G12.06c
OrthoDB:EOG4VQDZ2 NextBio:20803972 Uniprot:Q09870
Length = 363
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 154/374 (41%), Positives = 223/374 (59%)
Query: 8 KRLKGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEIN 67
KR KG + L RLVL+TL+ TP+ ++ I D+ PG++ +++S LRLLE++ + V+EI+
Sbjct: 7 KRFKGCEYLTHRLVLATLSGTPIRVEGIYPDEADPGVKDYQVSFLRLLEKLTNGSVIEIS 66
Query: 68 ETGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKD 127
TGT Y+PG ++GGR +VHDC ++ IGYFLEP++++ LFAK P S+ L G+T+ +D
Sbjct: 67 YTGTSFIYRPGNIIGGR-VVHDCPTTKGIGYFLEPILILCLFAKTPTSLTLTGVTSSNED 125
Query: 128 PSVDTFRSTTLPLL-KRFGVPSEGLELKIESRGSPPDGGGEVILTIPIV-DRLMAVRWLD 185
VD R++ LP L KRF V E LEL+I RGS P GGGEV P++ + L +R +
Sbjct: 126 IGVDVLRTSVLPSLQKRFQVGDE-LELRILKRGSAPGGGGEVNFLCPVIKESLPPIRLSE 184
Query: 186 EGMVKRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGIS 245
G V RIRG++ STRVS F N ++ +ARG+ N +PDV I+TD R G + G SPGY I+
Sbjct: 185 FGRVFRIRGIASSTRVSPAFANRLVESARGVLNPFIPDVFIYTDVRRGDECGNSPGYSIT 244
Query: 246 LVAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVD 305
LVAET GC + + GE E P++VG A LLE I GG VD
Sbjct: 245 LVAETNKGCSYAAEHC-----GEAGET----------PEDVGSFCAKKLLEVIESGGCVD 289
Query: 306 STHQGLLFLLCALSEPDVSKVRVGKLSPYG--IEMLRNIFDFLDIRFDIMPDPSTGTVIL 363
Q LS DV+ + VG+L + LR++ + + + +G V +
Sbjct: 290 PYTQPSTLTGMLLSSEDVNTIVVGQLGITSQLVVFLRDVKALFNCEYRFK-ELESGQVEM 348
Query: 364 RCVGCGYKNLSRKL 377
C+G GY N++R++
Sbjct: 349 SCLGKGYLNVNRRI 362
>WB|WBGene00022852 [details] [associations]
symbol:ZK1127.5 species:6239 "Caenorhabditis elegans"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0003824
GO:GO:0005730 GO:GO:0002119 GO:GO:0016246 GO:GO:0010171
GO:GO:0040011 GO:GO:0042254 GO:GO:0006396 GO:GO:0000910
GO:GO:0040035 SUPFAM:SSF55205 EMBL:FO081697 GO:GO:0007276
eggNOG:COG0430 HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
PIR:G88196 RefSeq:NP_495445.2 ProteinModelPortal:Q23400 SMR:Q23400
STRING:Q23400 PaxDb:Q23400 EnsemblMetazoa:ZK1127.5.1
EnsemblMetazoa:ZK1127.5.2 GeneID:174151 KEGG:cel:CELE_ZK1127.5
UCSC:ZK1127.5 CTD:174151 WormBase:ZK1127.5 InParanoid:Q23400
NextBio:882755 Uniprot:Q23400
Length = 379
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 140/380 (36%), Positives = 208/380 (54%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G R RL S L+ P+ I +IR +D PG+R E L+ LLE++ + VEI+ TGT
Sbjct: 10 GCNFFRIRLAYSILSGRPIRIINIRKNDDRPGIRDFESKLIGLLEKVTNGTKVEISRTGT 69
Query: 72 ELEYKPGIVMGGR-NLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
++ ++PG++ GG NL DCG R I YFLEPL+L+ F K P+ I+L+G+TN P + SV
Sbjct: 70 QVIFRPGMITGGVVNL--DCGTERCISYFLEPLLLLSPFCKVPMVIKLKGVTNAPGEISV 127
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D +++ L + +F + E L++KI++RG P+GGG V+ T PIV L V+ G V
Sbjct: 128 DGMKASWLKVYNKFVLNDEKLDIKIQARGLKPEGGGVVVFTAPIVKTLRPVKRQQVGKVC 187
Query: 191 RIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAET 250
+IRG ++ T+V+ MI AA+ + + DV+I D R G G SPGYG+ L AET
Sbjct: 188 KIRGQAYVTKVTPSLAYRMIDAAKKAMHGYISDVYITVDQRKGDAGGASPGYGLFLTAET 247
Query: 251 TSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQG 310
T G + A+S +GE ++P D +G + LL++I GG +DS+ Q
Sbjct: 248 TEGVIYQAE-AISRPKGESGV-------PILPED-IGIEAGHALLQQIYMGGALDSSAQI 298
Query: 311 LLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMP----------DPSTGT 360
L L DVS G L Y + LR++ F +I F + D TG+
Sbjct: 299 LASTFMTLCPKDVSHFLYGPLPMYSVHALRHLKQFFEIEFKMEDFKKTLKEEEADLKTGS 358
Query: 361 V---ILRCVGCGYKNLSRKL 377
++ VG GY NL++ +
Sbjct: 359 ADKAMVTAVGVGYSNLNKTI 378
>SGD|S000005370 [details] [associations]
symbol:RCL1 "Endonuclease that cleaves pre-rRNA at site A2
for 18S rRNA biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0008047
"enzyme activator activity" evidence=IDA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
SGD:S000005370 GO:GO:0005730 EMBL:BK006948 GO:GO:0004521
GO:GO:0008047 SUPFAM:SSF55205 GO:GO:0030686 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 eggNOG:COG0430 HOGENOM:HOG000157670
KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
GeneTree:ENSGT00530000063404 OrthoDB:EOG4VQDZ2 EMBL:Z74752
PIR:S66692 RefSeq:NP_014633.1 ProteinModelPortal:Q08096 SMR:Q08096
DIP:DIP-4539N IntAct:Q08096 MINT:MINT-566090 STRING:Q08096
PaxDb:Q08096 PeptideAtlas:Q08096 EnsemblFungi:YOL010W GeneID:854152
KEGG:sce:YOL010W CYGD:YOL010w NextBio:975908 Genevestigator:Q08096
GermOnline:YOL010W Uniprot:Q08096
Length = 367
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 128/378 (33%), Positives = 210/378 (55%)
Query: 7 YKRLKGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEI 66
Y +GSQ+ R R+VL+TL+ P+ I+ IR+ D PGL+ +E+S LRL+E + + V+EI
Sbjct: 8 YTTFQGSQNFRLRIVLATLSGKPIKIEKIRSGDLNPGLKDYEVSFLRLIESVTNGSVIEI 67
Query: 67 NETGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPK 126
+ TGT + Y+PGI++GG + H C S+ +GYF+EP++ + F+KK SI +GIT
Sbjct: 68 SYTGTTVIYRPGIIVGGAS-THICPSSKPVGYFVEPMLYLAPFSKKKFSILFKGITASHN 126
Query: 127 DPSVDTFRSTTLPLLKRFGVPSEGLE-LKIESRGSPPDGGGEVILTIP-IVDRLMAVRWL 184
D ++ + +P++++FGV L LK RGSPP GGGEV L + ++ + + + +
Sbjct: 127 DAGIEAIKWGLMPVMEKFGVRECALHTLK---RGSPPLGGGEVHLVVDSLIAQPITMHEI 183
Query: 185 DEGMVKRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGI 244
D ++ I GV++STRVS N MI A+ + L +V+I D G +GKSPG+GI
Sbjct: 184 DRPIISSITGVAYSTRVSPSLVNRMIDGAKKVLKNLQCEVNITADVWRGENSGKSPGWGI 243
Query: 245 SLVAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVV 304
+LVA+ S SY ++ + P+ +GE++A LLEEI+K V
Sbjct: 244 TLVAQ-------SKQKGWSYFAEDIGDAG-------SIPEELGEKVACQLLEEISKSAAV 289
Query: 305 DSTHQGLLFLLCALSEPDVSKVRVGK--LSPYGIEMLRNIFDFLDIRFDIMP--DPSTGT 360
L + + + D+ ++R+ K + I +LR+I + + P +
Sbjct: 290 GRNQLPLAIVYMVIGKEDIGRLRINKEQIDERFIILLRDIKKIFNTEVFLKPVDEADNED 349
Query: 361 VILRCVGCGYKNLSRKLS 378
+I G G+ N S+K++
Sbjct: 350 MIATIKGIGFTNTSKKIA 367
>CGD|CAL0001795 [details] [associations]
symbol:RCL1 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0004521
"endoribonuclease activity" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 CGD:CAL0001795 GO:GO:0003824
GO:GO:0005730 GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205
EMBL:AACQ01000133 eggNOG:COG0430 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 RefSeq:XP_713143.1 ProteinModelPortal:Q59U65
STRING:Q59U65 GeneID:3645199 KEGG:cal:CaO19.1886 Uniprot:Q59U65
Length = 371
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 135/379 (35%), Positives = 213/379 (56%)
Query: 11 KGSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG 70
+G ++ R RLVL+TL+ P+ I IR+ D PGL+ HE+S LRLLE + + +EI+ TG
Sbjct: 13 EGHRNFRLRLVLATLSGKPIKITKIRSQDLNPGLKDHEVSFLRLLEAVTNGSHIEISYTG 72
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDP-KDPS 129
T + Y+PGI++GG +L H+C ++SIGYF+EP++++ F+KK SI +G+TN D
Sbjct: 73 TTIIYRPGIIIGG-DLTHNCPDTKSIGYFIEPMLMLAPFSKKKFSIIFKGLTNIAGNDTG 131
Query: 130 VDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEV-ILTIPIVDRLMAVRWLDEGM 188
VD + LP++++FGV + L I RGS P GGGEV +L ++ + + + LD
Sbjct: 132 VDAIKWGLLPVMEKFGVRE--VSLHILKRGSAPLGGGEVHLLCSSLIPQPLTIHALDIPK 189
Query: 189 VKRIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVA 248
IRGV++ TRVS N MI +AR + +V+I D G +GKSPG+GI+LVA
Sbjct: 190 FSAIRGVAYCTRVSPSIVNRMIDSARAVLKPTGCEVNITADVWRGENSGKSPGFGITLVA 249
Query: 249 ETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTH 308
E+ G I + S G + P++ GE A LLEEI+ GVV
Sbjct: 250 ESKRGWRIVTENVGS--AGSL-------------PEDSGELTAYQLLEEISNSGVVGRYQ 294
Query: 309 QGLLFLLCALSEPDVSKVRVGK--LSPYGIEMLRNIFD-------FLDIRFDIMPDPSTG 359
L + + + D+ ++++ K + + +LR+I + F D ++ D
Sbjct: 295 LPLALVYMTIGKEDIGRLKIQKSEIDENLVSVLRDIQEVFGTEAFFKDDAEELDSDDKFM 354
Query: 360 TVILRCVGCGYKNLSRKLS 378
TV ++ G G+ N+S+K++
Sbjct: 355 TVSIK--GVGFTNVSKKIA 371
>UNIPROTKB|F1LRB6 [details] [associations]
symbol:Rcl1 "Protein Rcl1" species:10116 "Rattus
norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 GO:GO:0003824 GO:GO:0005730 GO:GO:0006396
SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
GeneTree:ENSGT00530000063404 IPI:IPI00382263
Ensembl:ENSRNOT00000048910 ArrayExpress:F1LRB6 Uniprot:F1LRB6
Length = 392
Score = 293 (108.2 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 62/131 (47%), Positives = 86/131 (65%)
Query: 204 QFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETTSGCFISVDTAVS 263
Q N ++ +ARGI N+ +PD++I+TDH G +GKSPG+G+SLVAETT+G F+S + A S
Sbjct: 177 QMANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELA-S 235
Query: 264 YARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDV 323
+G+ + P+++G A LLEEI +GG VDST Q L+ LL L + DV
Sbjct: 236 NPQGQGAAVL---------PEDLGRNCAKLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDV 286
Query: 324 SKVRVGKLSPY 334
SKV +G LSPY
Sbjct: 287 SKVLLGPLSPY 297
Score = 236 (88.1 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 55/139 (39%), Positives = 78/139 (56%)
Query: 48 EISLLRLLERICDDCVVEINETGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVG 107
E S +RLL++I + +EIN+TGT L Y+PG++ GG ++ HDC V R IGY+LE L+ +
Sbjct: 51 EASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGG-SVEHDCSVLRGIGYYLEALLCLA 109
Query: 108 LFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEGLELKIES-RGSPPDGGG 166
F K P+ I LRG+TND DPS K G+ + K+E G G
Sbjct: 110 PFMKHPLKIVLRGVTNDQVDPSYGVMTEDD----KSHGIMRLRAQQKLEFFHGHKLAGEA 165
Query: 167 EVILTIPIVDRLMAVRWLD 185
E ++ +P D MA R +D
Sbjct: 166 ECLVVVPTKDYQMANRIVD 184
>RGD|1305320 [details] [associations]
symbol:Rcl1 "RNA terminal phosphate cyclase-like 1"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000228 InterPro:IPR013792 RGD:1305320
GO:GO:0003824 GO:GO:0006396 SUPFAM:SSF55205 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 IPI:IPI00382263 EMBL:AY310155
UniGene:Rn.22496 ProteinModelPortal:Q7TQ76 STRING:Q7TQ76
UCSC:RGD:1305320 HOVERGEN:HBG066472 InParanoid:Q7TQ76
Genevestigator:Q7TQ76 Uniprot:Q7TQ76
Length = 447
Score = 293 (108.2 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 62/131 (47%), Positives = 86/131 (65%)
Query: 204 QFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETTSGCFISVDTAVS 263
Q N ++ +ARGI N+ +PD++I+TDH G +GKSPG+G+SLVAETT+G F+S + A S
Sbjct: 224 QMANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELA-S 282
Query: 264 YARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDV 323
+G+ + P+++G A LLEEI +GG VDST Q L+ LL L + DV
Sbjct: 283 NPQGQGAAVL---------PEDLGRNCAKLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDV 333
Query: 324 SKVRVGKLSPY 334
SKV +G LSPY
Sbjct: 334 SKVLLGPLSPY 344
Score = 236 (88.1 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 55/139 (39%), Positives = 78/139 (56%)
Query: 48 EISLLRLLERICDDCVVEINETGTELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVG 107
E S +RLL++I + +EIN+TGT L Y+PG++ GG ++ HDC V R IGY+LE L+ +
Sbjct: 98 EASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGG-SVEHDCSVLRGIGYYLEALLCLA 156
Query: 108 LFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEGLELKIES-RGSPPDGGG 166
F K P+ I LRG+TND DPS K G+ + K+E G G
Sbjct: 157 PFMKHPLKIVLRGVTNDQVDPSYGVMTEDD----KSHGIMRLRAQQKLEFFHGHKLAGEA 212
Query: 167 EVILTIPIVDRLMAVRWLD 185
E ++ +P D MA R +D
Sbjct: 213 ECLVVVPTKDYQMANRIVD 231
>UNIPROTKB|G4MZF3 [details] [associations]
symbol:MGG_04422 "18S rRNA biogenesis protein RCL1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:CM001232 KO:K11108
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
RefSeq:XP_003713515.1 ProteinModelPortal:G4MZF3
EnsemblFungi:MGG_04422T0 GeneID:2677945 KEGG:mgr:MGG_04422
Uniprot:G4MZF3
Length = 399
Score = 281 (104.0 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 98/304 (32%), Positives = 149/304 (49%)
Query: 94 RSIGYFLEPLILVGLFAKKPISIRLRG---IT--NDPKDPSVDTFRSTTLPLLKRFGVPS 148
R I Y+L P+ ++ F+K ++I G IT + D SVD+FR LPL FG+P
Sbjct: 110 RGITYYLIPIAMLAPFSKAHVNICFSGPGVITAATELGDMSVDSFRLAILPLYGLFGIPP 169
Query: 149 EGLELKIESRGSPP--D--GGGEVILTIPIVDRLMAVRWLDE--GMVKRIRGVSFSTRVS 202
+++ + R D GGG V L RL ++ G ++RI GV++ST VS
Sbjct: 170 ARIDILVRQRSCAGYGDRRGGGVVELRFASQVRLPKTLHMNRTPGRIRRIGGVAYSTGVS 229
Query: 203 SQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSP---GYGISLVAETT-SGCFISV 258
+ MIHAARG+ N L ++ I + G K+ G+G+SLVAE++ G S
Sbjct: 230 ASNNKRMIHAARGVLNALTGEIKI-GEAPPGKDDAKNKIGIGFGLSLVAESSVPGVVYSA 288
Query: 259 DTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCAL 318
D VS ARG P+++G Q A LLE IAKGG V + L A+
Sbjct: 289 DV-VSPARGGA------------LPEDLGAQCAHQLLEAIAKGGCVSWAAARSVLTLMAM 335
Query: 319 SEPDVSKVRVGK--LSPYGIEMLRNIFDFLDIRFDI--MPDPSTGTVILRCVGCGYKNLS 374
DV ++R+GK + I + R++ F + + + D T +++ G G N+
Sbjct: 336 GSEDVGRLRIGKDVVDEDTIGLARDLRKFGASSWGLRAVDDDDTDDMLISVKGTGVGNVG 395
Query: 375 RKLS 378
RK++
Sbjct: 396 RKIA 399
Score = 192 (72.6 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 50/127 (39%), Positives = 69/127 (54%)
Query: 7 YKRLKGSQSLRQRLVLSTLASTPVLIDDIRADD-TMPGLRPHEISLLRLLERICDDCVVE 65
Y R G + L QRLVLSTL PV I IR+ T PGL PHEIS LRLLE + + ++
Sbjct: 10 YVRFTGHRHLTQRLVLSTLTGKPVHISGIRSSSPTAPGLAPHEISFLRLLETVTNGSSIQ 69
Query: 66 INETGTELEYKPGIVMG---GRNL-VHDCGVS--------RSIGYFLEPLILVGLFAKKP 113
I+ TGT + Y PG++ G G V+ + R I Y+L P+ ++ F+K
Sbjct: 70 ISYTGTTMTYHPGLITGSVPGAGAAVNGDSIEFSLPETNRRGITYYLIPIAMLAPFSKAH 129
Query: 114 ISIRLRG 120
++I G
Sbjct: 130 VNICFSG 136
>UNIPROTKB|Q5VZU3 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 EMBL:AL158147
UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1 HOGENOM:HOG000110352
HOVERGEN:HBG054967 IPI:IPI00647354 SMR:Q5VZU3
Ensembl:ENST00000442869 Uniprot:Q5VZU3
Length = 182
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 89/190 (46%), Positives = 123/190 (64%)
Query: 161 PPDGGGEVILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRVSSQFENSMIHAARGIFNRL 220
PP GGGEV+ + P+ L ++ D G +KRIRG+++S RVS Q N ++ +AR I N+
Sbjct: 2 PPGGGGEVVFSCPVRKVLKPIQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARSILNKF 61
Query: 221 LPDVHIFTDHRAGPQAGKSPGYGISLVAETTSGCFISVDTAVSYARGEVDEIEYDEKREL 280
+PD++I+TDH G +GKSPG+G+SLVAETTSG F+S + A S +G+ +
Sbjct: 62 IPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSGTFLSAELA-SNPQGQGAAVL------- 113
Query: 281 MPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDVSKVRVGKLSPYGIEMLR 340
P+++G A LLEEI +GG VDST+Q L LL L + DVSKV +G LSPY IE LR
Sbjct: 114 --PEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLR 171
Query: 341 NIFDFLDIRF 350
++ F I F
Sbjct: 172 HLKSFFQIMF 181
>UNIPROTKB|Q5VZU1 [details] [associations]
symbol:RCL1 "RCL1" species:9606 "Homo sapiens" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:AL353151
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
EMBL:AL158147 UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1
EMBL:EF553527 IPI:IPI00646397 SMR:Q5VZU1 STRING:Q5VZU1
Ensembl:ENST00000381728 Ensembl:ENST00000381730
Ensembl:ENST00000448872 UCSC:uc010mhl.1 HOGENOM:HOG000110352
HOVERGEN:HBG054967 Uniprot:Q5VZU1
Length = 187
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 86/190 (45%), Positives = 116/190 (61%)
Query: 194 GVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETTSG 253
G +S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETTSG
Sbjct: 7 GCRYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSG 66
Query: 254 CFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLF 313
F+S + A S +G+ + P+++G A LLEEI +GG VDST+Q L
Sbjct: 67 TFLSAELA-SNPQGQGAAVL---------PEDLGRNCARLLLEEIYRGGCVDSTNQSLAL 116
Query: 314 LLCALSEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMPDPS----TG--TVILRCVG 367
LL L + DVSKV +G LSPY IE LR++ F I F I P G V++ CVG
Sbjct: 117 LLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVG 176
Query: 368 CGYKNLSRKL 377
G+ NLS+ L
Sbjct: 177 IGFSNLSKTL 186
>ASPGD|ASPL0000041674 [details] [associations]
symbol:AN1474 species:162425 "Emericella nidulans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 EMBL:BN001307
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:AACD01000022
eggNOG:COG0430 HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
RefSeq:XP_659078.1 STRING:Q5BDA6 EnsemblFungi:CADANIAT00008091
GeneID:2875217 KEGG:ani:AN1474.2 OrthoDB:EOG41ZJKD Uniprot:Q5BDA6
Length = 403
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 104/314 (33%), Positives = 161/314 (51%)
Query: 91 GVSRSIGYFLEPLILVGLFAKKPISIRLRG---ITND-PK-DPSVDTFRSTTLPLLKRFG 145
G +R + YFL PL L+ F+K PI + G IT+ P D SVD+ R+ LPL +FG
Sbjct: 104 GCTRGVSYFLIPLCLLAPFSKAPIKVLFTGPGVITSSTPTGDMSVDSVRTAILPLFNQFG 163
Query: 146 VPSEGLELKIESRGS-PPDG---GGEVILTIPIVDRL-MAVRWLDEGMVKRIRGVSFSTR 200
+ +EL++ R + P+G GGEV L RL + ++ G +KR+RGV++S
Sbjct: 164 I-FNNIELRVLRRSNLGPNGRGGGGEVQLVFGHQVRLPKTLHLMNAGRIKRVRGVAYSVG 222
Query: 201 VSSQFENSMIHAARGIFNRLLPDVHIFTD----------HRAGPQAGKSPG--YGISLVA 248
VS+ MI RG+ N L+PD +IF+D R P A K G +G+SLVA
Sbjct: 223 VSASNNARMIDTCRGVLNPLVPDTYIFSDVSSAPLVPAPERNNPSAKKKIGLGFGLSLVA 282
Query: 249 ETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTH 308
E+++GC S D A + G+ PP+++G+Q A LLE I+KGG V
Sbjct: 283 ESSTGCLFSADVACPPSGGQ-------------PPEDIGKQCAYQLLETISKGGCVAPAA 329
Query: 309 QGLLFLLCALSEPDVSKVRVGKL---SPYGIEMLRNIFDFLDIRFDIMP-DPSTGTVILR 364
++ L + DV +++VG+ I++ R++ F + + + VI+
Sbjct: 330 FPIMIGLMTMGSEDVGRIQVGRDIIGDESSIQLARDLMKFGAPGWGLRDAGDESNDVIIS 389
Query: 365 CVGCGYKNLSRKLS 378
VG G N+ RK++
Sbjct: 390 VVGRGIGNVGRKVA 403
Score = 248 (92.4 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 68/176 (38%), Positives = 97/176 (55%)
Query: 9 RLKGSQSLRQRLVLSTLASTPVLIDDIR-ADDTMPGLRPHEISLLRLLERICDDCVVEIN 67
+L G ++ RLV STL + I IR + T PGL HEIS LRLLE + + +EI+
Sbjct: 10 KLTGHKNFVYRLVFSTLTGRTIHISQIRPSSPTNPGLASHEISFLRLLEAVTNGSQMEIS 69
Query: 68 ETGTELEYKPGIVMG---------GRNLVHD--CGVSRSIGYFLEPLILVGLFAKKPISI 116
TGT + YKPG++ G G + H+ G +R + YFL PL L+ F+K PI +
Sbjct: 70 YTGTIIVYKPGLITGTASGVGASSGSVIRHEIPAGCTRGVSYFLIPLCLLAPFSKAPIKV 129
Query: 117 RLRG---ITND-PK-DPSVDTFRSTTLPLLKRFGVPSEGLELKIESRGS-PPDGGG 166
G IT+ P D SVD+ R+ LPL +FG+ +EL++ R + P+G G
Sbjct: 130 LFTGPGVITSSTPTGDMSVDSVRTAILPLFNQFGI-FNNIELRVLRRSNLGPNGRG 184
>GENEDB_PFALCIPARUM|PF14_0677 [details] [associations]
symbol:PF14_0677 "RNA 3'-Terminal Phosphate
Cyclase-like protein, putative" species:5833 "Plasmodium
falciparum" [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000228
InterPro:IPR013792 GO:GO:0003824 GO:GO:0042254 GO:GO:0006396
EMBL:AE014187 SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 PANTHER:PTHR11096 Pfam:PF01137
RefSeq:XP_001348851.1 ProteinModelPortal:Q8I717
EnsemblProtists:PF14_0677:mRNA GeneID:812259 KEGG:pfa:PF14_0677
EuPathDB:PlasmoDB:PF3D7_1471000 HOGENOM:HOG000281878 OMA:NDENIVP
ProtClustDB:CLSZ2431805 Uniprot:Q8I717
Length = 467
Score = 257 (95.5 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 72/253 (28%), Positives = 123/253 (48%)
Query: 43 GLRPHEISLLRLLERICDDCVVEINETGTELEYKPGIVMGGRN---------LVHDCGVS 93
GL+ +E +L+L++++CD+ ++INE G EL ++PG ++G N + CG
Sbjct: 63 GLKEYEAKILKLIDKLCDNTTIKINEEGDELYFEPGYLIGNTNEEDSRNMYNMTFHCGKE 122
Query: 94 RSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEG-LE 152
RSI Y+LE LI++ LF K P++I L+GIT+D D +V T + K +E L
Sbjct: 123 RSITYYLEFLIMIVLFFKNPVNILLKGITDDYIDNNVYTCKIICEHFFKEILKLNEDFLY 182
Query: 153 LKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRVSSQFENSMIHA 212
+ I R + P+ GEV + + ++ + G+V +I G S +S F N +++
Sbjct: 183 INILKRSTKPECSGEVHFFMRNIKKINPFDITNVGVVNKISGSILSNNISLMFRNKIMNF 242
Query: 213 ARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGIS--LVAETTSGCFISVDTAVS--YARGE 268
A+ P ++I + + IS L A T C + D V + +
Sbjct: 243 AKKQLYHFTPYINIDVQKEDDKKNKNINSHFISFSLFAHTKCNCIYAADICVDELFLKKL 302
Query: 269 VDEIEYDEKRELM 281
+ I + +K E M
Sbjct: 303 KEGINHRDKHEHM 315
Score = 119 (46.9 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 284 DNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALS-EPDVSKVRVGKLSPYGIEMLRNI 342
+ +G I+ ++ +I VD+ +Q L L AL+ + VSK+ + + PY I ++R +
Sbjct: 369 ERLGFFISLKMINQIKGLSSVDTNYQWLPLLYMALATDTSVSKITLSIIKPYSITLIRLL 428
Query: 343 FDFLDIRFDI---MPDPSTGTVILRCVGCGYKNLSRK 376
DF ++ F I P + +++CVG GY+N+ +K
Sbjct: 429 RDFFNVVFKIEKVQKSPIHYSYLIQCVGIGYQNIFKK 465
>UNIPROTKB|Q8I717 [details] [associations]
symbol:PF14_0677 "RNA 3'-Terminal Phosphate Cyclase-like
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0005575 "cellular_component" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000228 InterPro:IPR013792
GO:GO:0003824 GO:GO:0042254 GO:GO:0006396 EMBL:AE014187
SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20 InterPro:IPR023797
PANTHER:PTHR11096 Pfam:PF01137 RefSeq:XP_001348851.1
ProteinModelPortal:Q8I717 EnsemblProtists:PF14_0677:mRNA
GeneID:812259 KEGG:pfa:PF14_0677 EuPathDB:PlasmoDB:PF3D7_1471000
HOGENOM:HOG000281878 OMA:NDENIVP ProtClustDB:CLSZ2431805
Uniprot:Q8I717
Length = 467
Score = 257 (95.5 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 72/253 (28%), Positives = 123/253 (48%)
Query: 43 GLRPHEISLLRLLERICDDCVVEINETGTELEYKPGIVMGGRN---------LVHDCGVS 93
GL+ +E +L+L++++CD+ ++INE G EL ++PG ++G N + CG
Sbjct: 63 GLKEYEAKILKLIDKLCDNTTIKINEEGDELYFEPGYLIGNTNEEDSRNMYNMTFHCGKE 122
Query: 94 RSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEG-LE 152
RSI Y+LE LI++ LF K P++I L+GIT+D D +V T + K +E L
Sbjct: 123 RSITYYLEFLIMIVLFFKNPVNILLKGITDDYIDNNVYTCKIICEHFFKEILKLNEDFLY 182
Query: 153 LKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRVSSQFENSMIHA 212
+ I R + P+ GEV + + ++ + G+V +I G S +S F N +++
Sbjct: 183 INILKRSTKPECSGEVHFFMRNIKKINPFDITNVGVVNKISGSILSNNISLMFRNKIMNF 242
Query: 213 ARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGIS--LVAETTSGCFISVDTAVS--YARGE 268
A+ P ++I + + IS L A T C + D V + +
Sbjct: 243 AKKQLYHFTPYINIDVQKEDDKKNKNINSHFISFSLFAHTKCNCIYAADICVDELFLKKL 302
Query: 269 VDEIEYDEKRELM 281
+ I + +K E M
Sbjct: 303 KEGINHRDKHEHM 315
Score = 119 (46.9 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 284 DNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALS-EPDVSKVRVGKLSPYGIEMLRNI 342
+ +G I+ ++ +I VD+ +Q L L AL+ + VSK+ + + PY I ++R +
Sbjct: 369 ERLGFFISLKMINQIKGLSSVDTNYQWLPLLYMALATDTSVSKITLSIIKPYSITLIRLL 428
Query: 343 FDFLDIRFDI---MPDPSTGTVILRCVGCGYKNLSRK 376
DF ++ F I P + +++CVG GY+N+ +K
Sbjct: 429 RDFFNVVFKIEKVQKSPIHYSYLIQCVGIGYQNIFKK 465
>UNIPROTKB|Q5VYW8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 GO:GO:0003824 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20 InterPro:IPR023797
PANTHER:PTHR11096 Pfam:PF01137 EMBL:AL158147 UniGene:Hs.194121
HGNC:HGNC:17687 ChiTaRS:RCL1 IPI:IPI00477560 SMR:Q5VYW8
Ensembl:ENST00000381732 HOGENOM:HOG000207652 Uniprot:Q5VYW8
Length = 175
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 65/119 (54%), Positives = 82/119 (68%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G LRQRLVLSTL+ PV I IRA D PGLR E S +RLL++I + +EIN+TGT
Sbjct: 12 GCNFLRQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGT 71
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
L Y+PG++ GG ++ HDC V R IGY+LE L+ + F K P+ I LRG+TND DPSV
Sbjct: 72 TLYYQPGLLYGG-SVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSV 129
>UNIPROTKB|Q5VZU2 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 GO:GO:0003824 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
EMBL:AL158147 UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1
HOGENOM:HOG000110352 HOVERGEN:HBG054967 IPI:IPI00479685 SMR:Q5VZU2
Ensembl:ENST00000441844 Uniprot:Q5VZU2
Length = 138
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 67/141 (47%), Positives = 91/141 (64%)
Query: 194 GVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAETTSG 253
G +S RVS Q N ++ +AR I N+ +PD++I+TDH G +GKSPG+G+SLVAETTSG
Sbjct: 7 GCRYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSG 66
Query: 254 CFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLF 313
F+S + A S +G+ + P+++G A LLEEI +GG VDST+Q L
Sbjct: 67 TFLSAELA-SNPQGQGAAVL---------PEDLGRNCARLLLEEIYRGGCVDSTNQSLAL 116
Query: 314 LLCALSEPDVSKVRVGKLSPY 334
LL L + DVSKV +G LSPY
Sbjct: 117 LLMTLGQQDVSKVLLGPLSPY 137
>RGD|1303111 [details] [associations]
symbol:Rtcd1 "RNA terminal phosphate cyclase domain 1"
species:10116 "Rattus norvegicus" [GO:0003963 "RNA-3'-phosphate
cyclase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006396
"RNA processing" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 PIRSF:PIRSF005378 RGD:1303111
GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205 EMBL:CH473952
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 HOGENOM:HOG000015264
HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK OrthoDB:EOG4DR9CM
Gene3D:3.30.360.20 InterPro:IPR013791 SUPFAM:SSF52913
TIGRFAMs:TIGR03399 EMBL:BC079374 IPI:IPI00201443
RefSeq:NP_001004227.1 UniGene:Rn.25445 STRING:Q68FS8
Ensembl:ENSRNOT00000020149 GeneID:295395 KEGG:rno:295395
UCSC:RGD:1303111 CTD:295395 InParanoid:Q68FS8 NextBio:639497
Genevestigator:Q68FS8 Uniprot:Q68FS8
Length = 366
Score = 265 (98.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 80/250 (32%), Positives = 121/250 (48%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +CD + E E G
Sbjct: 16 GGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRDLCDGHL-EGAEIGS 74
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + P + GG + D + S+ ++ + LFA P +RL+G TN P +
Sbjct: 75 TEITFTPEKIRGGVHTA-DTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQI 133
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P+ ++FG I++RG P GGGEVI+ + V RL + D G V
Sbjct: 134 DYTMMVFKPIAEKFGFT---FNCDIKTRGYYPKGGGEVIVRMSPVKRLDPINLTDRGSVT 190
Query: 191 RIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHIFTD--HRAGPQAGKSPGYGISLV 247
+I G +F V + M AA + + D+++ A QA + G GI +V
Sbjct: 191 KIYGRAFVAGVLPLKVAKDMAAAAVRCLRKEIRDLYVSIQPVQEARDQAFGN-GSGIIIV 249
Query: 248 AETTSGCFIS 257
AET++GC +
Sbjct: 250 AETSTGCLFA 259
Score = 209 (78.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 82/299 (27%), Positives = 128/299 (42%)
Query: 84 RNLVH--DCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLL 141
R VH D + S+ ++ + LFA P +RL+G TN P +D P+
Sbjct: 85 RGGVHTADTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQIDYTMMVFKPIA 144
Query: 142 KRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRV 201
++FG I++RG P GGGEVI+ + V RL + D G V +I G +F V
Sbjct: 145 EKFGFT---FNCDIKTRGYYPKGGGEVIVRMSPVKRLDPINLTDRGSVTKIYGRAFVAGV 201
Query: 202 SS-QFENSMIHAARGIFNRLLPDVHIFTD--HRAGPQAGKSPGYGISLVAETTSGCFISV 258
+ M AA + + D+++ A QA + G GI +VAET++GC +
Sbjct: 202 LPLKVAKDMAAAAVRCLRKEIRDLYVSIQPVQEARDQAFGN-GSGIIIVAETSTGCLFAG 260
Query: 259 DTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCAL 318
+ RG + D VG + A LL + GG VD Q L + AL
Sbjct: 261 SSLGK--RG-------------VNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIIFMAL 305
Query: 319 SEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMP-----DPSTGTVILRCVGCGYKN 372
+ +S+++ G ++ + + +F + D S T I+ C G G N
Sbjct: 306 AS-GISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEEEEDASKDTYIIECEGVGMAN 363
>UNIPROTKB|F1S564 [details] [associations]
symbol:RTCA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR017770
PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
PROSITE:PS01287 GeneTree:ENSGT00530000063404 GO:GO:0003963
OMA:RRGHYPK InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
EMBL:CU466517 Ensembl:ENSSSCT00000007518 Uniprot:F1S564
Length = 365
Score = 227 (85.0 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 62/191 (32%), Positives = 94/191 (49%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +CD +E E G
Sbjct: 16 GGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRDLCDG-QLEGAEIGS 74
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + P + GG + D + S+ ++ + LFA P +RL+G TN P +
Sbjct: 75 TEIMFTPEKIKGGTHTA-DTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQI 133
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P++++FG I+ RG P GGGEVI+ + V +L + D G V
Sbjct: 134 DYTAMVFKPIVEKFGFT---FNCDIKMRGYYPKGGGEVIVRMSPVKQLNPINLTDRGSVI 190
Query: 191 RIRGVSFSTRV 201
+ G SF + +
Sbjct: 191 KSHGHSFCSGI 201
Score = 82 (33.9 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 25/94 (26%), Positives = 40/94 (42%)
Query: 284 DNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIF 343
D VG + A LL + GG VD Q L + AL+ +S+++ G ++ + +
Sbjct: 270 DKVGIEAAEVLLANLRHGGAVDEYLQDQLIIFMALAS-GISRIKTGPVTLHTQTAIHFAE 328
Query: 344 DFLDIRFDIMP-----DPSTGTVILRCVGCGYKN 372
+F + D S T I+ C G G N
Sbjct: 329 QLAKAKFTVKKSEDEEDASKDTYIIECQGIGMTN 362
>MGI|MGI:1913618 [details] [associations]
symbol:Rtca "RNA 3'-terminal phosphate cyclase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 MGI:MGI:1913618 GO:GO:0005524
GO:GO:0005654 GO:GO:0006396 EMBL:CH466532 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:AK009245 EMBL:AK152129
EMBL:AK159961 IPI:IPI00110315 RefSeq:NP_079793.2 UniGene:Mm.251228
ProteinModelPortal:Q9D7H3 SMR:Q9D7H3 STRING:Q9D7H3
PhosphoSite:Q9D7H3 REPRODUCTION-2DPAGE:Q9D7H3 PaxDb:Q9D7H3
PRIDE:Q9D7H3 Ensembl:ENSMUST00000000348 GeneID:66368 KEGG:mmu:66368
InParanoid:Q3TVV2 NextBio:321465 PMAP-CutDB:Q9D7H3 Bgee:Q9D7H3
CleanEx:MM_RTCD1 Genevestigator:Q9D7H3
GermOnline:ENSMUSG00000000339 Uniprot:Q9D7H3
Length = 366
Score = 260 (96.6 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 79/250 (31%), Positives = 120/250 (48%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +C + E E G
Sbjct: 16 GGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMVRDLCGGHL-EGAEIGS 74
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + P + GG + D + S+ ++ + LFA P +RL+G TN P +
Sbjct: 75 TEITFTPEKIRGGVHTA-DTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQI 133
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P+ ++FG I++RG P GGGEVI+ + V RL + D G V
Sbjct: 134 DYTMMVFKPIAEKFGFT---FNCDIKTRGYYPKGGGEVIVRVSPVKRLDPINLTDRGSVT 190
Query: 191 RIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHIFTD--HRAGPQAGKSPGYGISLV 247
+I G +F V + M AA + + D+++ A QA + G GI +V
Sbjct: 191 KIYGRAFVAGVLPLKVAKDMAAAAVRCIRKEIRDLYVSIQPVQEARDQAFGN-GSGIIIV 249
Query: 248 AETTSGCFIS 257
AET++GC +
Sbjct: 250 AETSTGCLFA 259
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 80/299 (26%), Positives = 128/299 (42%)
Query: 84 RNLVH--DCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLL 141
R VH D + S+ ++ + LFA P +RL+G TN P +D P+
Sbjct: 85 RGGVHTADTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQIDYTMMVFKPIA 144
Query: 142 KRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRV 201
++FG I++RG P GGGEVI+ + V RL + D G V +I G +F V
Sbjct: 145 EKFGFT---FNCDIKTRGYYPKGGGEVIVRVSPVKRLDPINLTDRGSVTKIYGRAFVAGV 201
Query: 202 SS-QFENSMIHAARGIFNRLLPDVHIFTD--HRAGPQAGKSPGYGISLVAETTSGCFISV 258
+ M AA + + D+++ A QA + G GI +VAET++GC +
Sbjct: 202 LPLKVAKDMAAAAVRCIRKEIRDLYVSIQPVQEARDQAFGN-GSGIIIVAETSTGCLFAG 260
Query: 259 DTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCAL 318
+ RG + D VG + A LL + GG VD Q L + AL
Sbjct: 261 SSLGK--RG-------------VNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIIFMAL 305
Query: 319 SEPDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMP-----DPSTGTVILRCVGCGYKN 372
+ +S+++ G ++ + + +F + D + T ++ C G G N
Sbjct: 306 AN-GISRIKTGSVTLHTQTAIHFAEQLAKAKFTVKKSEEEEDATKDTYVIECEGIGMAN 363
>UNIPROTKB|Q2HJ88 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9913 "Bos taurus" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0005654
GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 EMBL:BC113251
IPI:IPI00705240 RefSeq:NP_001039520.1 UniGene:Bt.20917
ProteinModelPortal:Q2HJ88 STRING:Q2HJ88 Ensembl:ENSBTAT00000008293
GeneID:510469 KEGG:bta:510469 CTD:8634 HOGENOM:HOG000015264
HOVERGEN:HBG017761 InParanoid:Q2HJ88 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM NextBio:20869459 Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
Uniprot:Q2HJ88
Length = 366
Score = 259 (96.2 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 76/249 (30%), Positives = 119/249 (47%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +CD +E E G
Sbjct: 16 GGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRDLCDG-QLEGAEIGS 74
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + P + GG + D + S+ ++ + LFA P +RL+G TN P +
Sbjct: 75 TEITFTPEKIKGGVHTA-DTKTAGSVCLLMQVSMPCVLFAACPSELRLKGGTNAEMAPQI 133
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P++++FG I+ RG P GGGEVI+ + V +L + D G V
Sbjct: 134 DYTAMVFKPIVEKFGFT---FNCDIKMRGYYPKGGGEVIVRMSPVKQLSPINLTDRGCVT 190
Query: 191 RIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHIFTDHRAGPQ-AGKSPGYGISLVA 248
+I G +F V + M AA + + D+++ P+ G GI ++A
Sbjct: 191 KIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIA 250
Query: 249 ETTSGCFIS 257
ET++GC +
Sbjct: 251 ETSTGCLFA 259
Score = 200 (75.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 73/272 (26%), Positives = 116/272 (42%)
Query: 108 LFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGE 167
LFA P +RL+G TN P +D P++++FG I+ RG P GGGE
Sbjct: 111 LFAACPSELRLKGGTNAEMAPQIDYTAMVFKPIVEKFGFT---FNCDIKMRGYYPKGGGE 167
Query: 168 VILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHI 226
VI+ + V +L + D G V +I G +F V + M AA + + D+++
Sbjct: 168 VIVRMSPVKQLSPINLTDRGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYV 227
Query: 227 FTDHRAGPQ-AGKSPGYGISLVAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDN 285
P+ G GI ++AET++GC + + RG + D
Sbjct: 228 NIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGK--RG-------------VNADK 272
Query: 286 VGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDF 345
VG + A LL + GG VD Q L + AL+ +S+++ G ++ + +
Sbjct: 273 VGIEAAEMLLANLRHGGAVDEYLQDQLIIFMALAS-GISRIKTGPVTLHTQTAIHFAEQL 331
Query: 346 LDIRFDIMP-----DPSTGTVILRCVGCGYKN 372
+F + D S T I+ C G G N
Sbjct: 332 AKAKFTVKKSEDEEDASKDTYIIECQGIGMTN 363
>ZFIN|ZDB-GENE-030131-9687 [details] [associations]
symbol:rtca "RNA 3'-terminal phosphate cyclase"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 ZFIN:ZDB-GENE-030131-9687
GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
PROSITE:PS01287 GeneTree:ENSGT00530000063404 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:CR751228 EMBL:BC046087
EMBL:AY398409 IPI:IPI00501190 RefSeq:NP_955830.1 UniGene:Dr.104448
HSSP:P46849 STRING:Q7ZUX5 Ensembl:ENSDART00000021666 GeneID:321129
KEGG:dre:321129 InParanoid:Q7ZUX5 NextBio:20807244 Uniprot:Q7ZUX5
Length = 363
Score = 257 (95.5 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 71/247 (28%), Positives = 117/247 (47%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G Q LR LS + + I+ IRA + PGLRP +S L LL +C+ + +
Sbjct: 16 GGQILRVSAALSCIQGASIKINKIRAGRSTPGLRPQHLSGLELLRDMCNGNLEGATVGSS 75
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
E+ PG + GG N + D + S+ ++ + LFA+ P + L+G TN P +D
Sbjct: 76 EITLTPGKIKGG-NHIADTHTAGSVTLLMQVSLPCALFAQGPSELCLKGGTNAEMAPQID 134
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
P+++RFGV + +L++ RG P GGGEV+L + L + + G + +
Sbjct: 135 YTVKVFKPIVERFGVQFD-CDLRM--RGYYPKGGGEVVLKVNPAKELSPINMTERGNITK 191
Query: 192 IRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAET 250
I G +F V + M AA + + D++I G GI ++AE+
Sbjct: 192 IYGRAFVAGVLPFKLAKDMSTAAIRTIRKEIKDLYINIQSLQEKDKACGNGNGIIIIAES 251
Query: 251 TSGCFIS 257
++GC +
Sbjct: 252 STGCIFA 258
>UNIPROTKB|E1C1Y0 [details] [associations]
symbol:RTCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003963 "RNA-3'-phosphate cyclase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0006396
SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 KO:K01974 OMA:RRGHYPK
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399 CTD:295395
EMBL:AADN02012905 IPI:IPI00602093 RefSeq:XP_422311.1
UniGene:Gga.9061 PRIDE:E1C1Y0 Ensembl:ENSGALT00000008464
GeneID:424468 KEGG:gga:424468 NextBio:20826795 Uniprot:E1C1Y0
Length = 365
Score = 252 (93.8 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 73/249 (29%), Positives = 118/249 (47%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +C+ + E E G
Sbjct: 16 GGQILRVSTALSCLLGLPLRVRRIRAGRSQPGLRPQHLSGLEIVRDLCEGNL-EGGEIGS 74
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + PG + GG ++ D + S+ ++ + LFA P + +G TN P +
Sbjct: 75 TEITFTPGKIKGGTHIA-DTKTAGSVCLLMQVAMPCVLFAASPSELHFKGGTNAEMAPQI 133
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P++++F I+ RG P GGGEVI+ + V L + + G V
Sbjct: 134 DYTVMVFKPIVEKFNFT---FNCDIKKRGYYPQGGGEVIVRMSPVKELSPIDLTERGAVT 190
Query: 191 RIRGVSF-STRVSSQFENSMIHAARGIFNRLLPDVHI-FTDHRAGPQAGKSPGYGISLVA 248
+I G +F + + + M AA + + D++I R G GI +VA
Sbjct: 191 KIYGRAFVAGALPIKLAKDMSAAAVRCIRKEIRDLYINIQTVREPDDQAFGTGSGIIIVA 250
Query: 249 ETTSGCFIS 257
ET++GC ++
Sbjct: 251 ETSTGCLLA 259
Score = 201 (75.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 76/296 (25%), Positives = 128/296 (43%)
Query: 83 GRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLK 142
G + D + S+ ++ + LFA P + +G TN P +D P+++
Sbjct: 86 GGTHIADTKTAGSVCLLMQVAMPCVLFAASPSELHFKGGTNAEMAPQIDYTVMVFKPIVE 145
Query: 143 RFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKRIRGVSF-STRV 201
+F I+ RG P GGGEVI+ + V L + + G V +I G +F + +
Sbjct: 146 KFNFT---FNCDIKKRGYYPQGGGEVIVRMSPVKELSPIDLTERGAVTKIYGRAFVAGAL 202
Query: 202 SSQFENSMIHAARGIFNRLLPDVHI-FTDHRAGPQAGKSPGYGISLVAETTSGCFISVDT 260
+ M AA + + D++I R G GI +VAET++GC ++ +
Sbjct: 203 PIKLAKDMSAAAVRCIRKEIRDLYINIQTVREPDDQAFGTGSGIIIVAETSTGCLLA-GS 261
Query: 261 AVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSE 320
++ RG+ D VG + A LL+ + GG VD + Q L + AL++
Sbjct: 262 SLG-RRGKNS-------------DRVGIEAAEILLKNLKHGGAVDDSLQDQLIIFMALAK 307
Query: 321 PDVSKVRVGKLSPYGIEMLRNIFDFLDIRFDIMP----DPSTGTVILRCVGCGYKN 372
VS+V+ G ++ + + +F + DPS T I+ C G G N
Sbjct: 308 -GVSRVKSGPVTLHTQTAIHFAEQLTKAKFTVTKSEEEDPSKDTYIIECQGMGMIN 362
>UNIPROTKB|E2RQG6 [details] [associations]
symbol:RTCA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR017770
GO:GO:0006396 SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
EMBL:AAEX03004772 Ensembl:ENSCAFT00000031847 OMA:IRAGREN
Uniprot:E2RQG6
Length = 540
Score = 259 (96.2 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 76/249 (30%), Positives = 119/249 (47%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +CD +E E G
Sbjct: 190 GGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRDLCDG-QLEGAEIGS 248
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + P + GG + D + S+ ++ + LFA P +RL+G TN P +
Sbjct: 249 TEIIFTPEKIKGGIHTA-DTKTAGSVCLLMQVSMPCVLFAASPSELRLKGGTNAEMAPQI 307
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P++++FG I+ RG P GGGEVI+ + V +L + D G V
Sbjct: 308 DYTAMVFKPIVEKFGFQ---FNCDIKMRGYYPKGGGEVIVRMSPVKQLNPINLTDRGSVT 364
Query: 191 RIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHIFTDHRAGPQ-AGKSPGYGISLVA 248
+I G +F V + M AA + + D+++ P+ G GI ++A
Sbjct: 365 KIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIA 424
Query: 249 ETTSGCFIS 257
ET++GC +
Sbjct: 425 ETSTGCLFA 433
Score = 193 (73.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 72/272 (26%), Positives = 115/272 (42%)
Query: 108 LFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGE 167
LFA P +RL+G TN P +D P++++FG I+ RG P GGGE
Sbjct: 285 LFAASPSELRLKGGTNAEMAPQIDYTAMVFKPIVEKFGFQ---FNCDIKMRGYYPKGGGE 341
Query: 168 VILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHI 226
VI+ + V +L + D G V +I G +F V + M AA + + D+++
Sbjct: 342 VIVRMSPVKQLNPINLTDRGSVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYV 401
Query: 227 FTDHRAGPQ-AGKSPGYGISLVAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDN 285
P+ G GI ++AET++GC + + RG + D
Sbjct: 402 NIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGK--RG-------------VNADK 446
Query: 286 VGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDVSKVRVGKLSPYGIEMLRNIFDF 345
VG + A LL + GG VD Q L + AL+ VS+++ G ++ + +
Sbjct: 447 VGIEAAEMLLANLRHGGAVDEYLQDQLIIFMALA-CGVSRIKTGPVTLHTQTAIHFAEQL 505
Query: 346 LDIRFDIMP-----DPSTGTVILRCVGCGYKN 372
+F + D + I+ C G G N
Sbjct: 506 AKAKFSVKKSEDEEDAAKDAYIIECQGIGMTN 537
>UNIPROTKB|O00442 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 GO:GO:0005524 GO:GO:0005654
GO:GO:0003723 EMBL:CH471097 GO:GO:0006396 SUPFAM:SSF55205
EMBL:AL445928 eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:Y11651 EMBL:Y11652
EMBL:AL663111 EMBL:BC012604 IPI:IPI00011726 IPI:IPI00221327
PIR:T48844 RefSeq:NP_001124313.1 RefSeq:NP_003720.1
UniGene:Hs.484222 ProteinModelPortal:O00442 SMR:O00442
IntAct:O00442 STRING:O00442 PhosphoSite:O00442 PaxDb:O00442
PRIDE:O00442 DNASU:8634 Ensembl:ENST00000260563
Ensembl:ENST00000370128 GeneID:8634 KEGG:hsa:8634 UCSC:uc001dtc.3
UCSC:uc001dtd.3 GeneCards:GC01P100732 HGNC:HGNC:17981 HPA:HPA027982
HPA:HPA028151 MIM:611286 neXtProt:NX_O00442 PharmGKB:PA34877
ChiTaRS:RTCA GenomeRNAi:8634 NextBio:32367 PMAP-CutDB:O00442
ArrayExpress:O00442 Bgee:O00442 CleanEx:HS_RTCD1
Genevestigator:O00442 Uniprot:O00442
Length = 366
Score = 250 (93.1 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 74/249 (29%), Positives = 119/249 (47%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETG- 70
G Q LR LS L P+ + IRA + PGLRP +S L ++ +CD +E E G
Sbjct: 16 GGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRDLCDG-QLEGAEIGS 74
Query: 71 TELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
TE+ + P + GG + D + S+ ++ + LFA P + L+G TN P +
Sbjct: 75 TEITFTPEKIKGGIHTA-DTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQI 133
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D P++++FG I++RG P GGGEVI+ + V +L + + G V
Sbjct: 134 DYTVMVFKPIVEKFGFI---FNCDIKTRGYYPKGGGEVIVRMSPVKQLNPINLTERGCVT 190
Query: 191 RIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHIFTDHRAGPQ-AGKSPGYGISLVA 248
+I G +F V + M AA + + D+++ P+ G GI ++A
Sbjct: 191 KIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIA 250
Query: 249 ETTSGCFIS 257
ET++GC +
Sbjct: 251 ETSTGCLFA 259
Score = 190 (71.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 73/272 (26%), Positives = 118/272 (43%)
Query: 108 LFAKKPISIRLRGITNDPKDPSVDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGE 167
LFA P + L+G TN P +D P++++FG I++RG P GGGE
Sbjct: 111 LFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIVEKFGFI---FNCDIKTRGYYPKGGGE 167
Query: 168 VILTIPIVDRLMAVRWLDEGMVKRIRGVSFSTRVSS-QFENSMIHAARGIFNRLLPDVHI 226
VI+ + V +L + + G V +I G +F V + M AA + + D+++
Sbjct: 168 VIVRMSPVKQLNPINLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYV 227
Query: 227 FTDHRAGPQ-AGKSPGYGISLVAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDN 285
P+ G GI ++AET++GC + + RG + D
Sbjct: 228 NIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGK--RG-------------VNADK 272
Query: 286 VGEQIASCLLEEIAKGGVVDSTHQGLLFLLCALSEPDVSKVRVGKLSPY---GIEMLRNI 342
VG + A LL + GG VD Q L + AL+ VS+++ G ++ + I I
Sbjct: 273 VGIEAAEMLLANLRHGGTVDEYLQDQLIVFMALAN-GVSRIKTGPVTLHTQTAIHFAEQI 331
Query: 343 FD--FLDIRFDIMPDPSTGTVILRCVGCGYKN 372
F+ + + D + T I+ C G G N
Sbjct: 332 AKAKFIVKKSEDEEDAAKDTYIIECQGIGMTN 363
>UNIPROTKB|P46849 [details] [associations]
symbol:rtcA "RNA 3'-terminal phosphate cyclase"
species:83333 "Escherichia coli K-12" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003963 "RNA-3'-phosphate
cyclase activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00200 InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 GO:GO:0005524 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U18997 GO:GO:0006396 SUPFAM:SSF55205 EMBL:M13585
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963
HOGENOM:HOG000015264 KO:K01974 OMA:RRGHYPK Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
RefSeq:YP_026219.1 RefSeq:YP_492013.1 PDB:1QMH PDB:1QMI PDB:3KGD
PDB:3TUT PDB:3TUX PDB:3TV1 PDB:3TW3 PDBsum:1QMH PDBsum:1QMI
PDBsum:3KGD PDBsum:3TUT PDBsum:3TUX PDBsum:3TV1 PDBsum:3TW3
ProteinModelPortal:P46849 SMR:P46849 PRIDE:P46849
EnsemblBacteria:EBESCT00000002096 EnsemblBacteria:EBESCT00000015819
GeneID:12932192 GeneID:2847707 KEGG:ecj:Y75_p3757 KEGG:eco:b4475
PATRIC:32122276 EchoBASE:EB2773 EcoGene:EG12938
ProtClustDB:PRK04204 BioCyc:EcoCyc:G7750-MONOMER
BioCyc:ECOL316407:JW5688-MONOMER BioCyc:MetaCyc:G7750-MONOMER
BRENDA:6.5.1.4 EvolutionaryTrace:P46849 Genevestigator:P46849
Uniprot:P46849
Length = 338
Score = 200 (75.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 81/300 (27%), Positives = 126/300 (42%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G Q LR L LS + P I IRA PGL ++ ++ IC VE E G+
Sbjct: 15 GGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICG-ATVEGAELGS 73
Query: 72 E-LEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSV 130
+ L ++PG V GG + G + S L+ ++ FA P + + G T++P P
Sbjct: 74 QRLLFRPGTVRGG-DYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPA 132
Query: 131 DTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVK 190
D R PLL + G+ + L+ G P GGG V + V ++ + G +
Sbjct: 133 DFIRRVLEPLLAKIGIHQQTTLLR---HGFYPAGGGVVATEVSPVASFNTLQLGERGNIV 189
Query: 191 RIRGVSFSTRVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISLVAET 250
++RG V I G F+ ++H P+ + PG +SL E+
Sbjct: 190 QMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNL------PR-DQGPGNTVSLEVES 242
Query: 251 ---TSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDST 307
T F+ + VS A ++ + KR L VGE +A L+ +A G + T
Sbjct: 243 ENITERFFVVGEKRVS-AEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFT 301
>FB|FBgn0025630 [details] [associations]
symbol:CG4061 species:7227 "Drosophila melanogaster"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006396 "RNA processing"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 GO:GO:0005524 GO:GO:0005654 EMBL:AE014298
GO:GO:0006396 EMBL:AL031765 SUPFAM:SSF55205 eggNOG:COG0430
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
GeneTree:ENSGT00530000063404 GO:GO:0003963 KO:K01974 OMA:RRGHYPK
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:AY052112
PIR:T13745 RefSeq:NP_569977.1 UniGene:Dm.33463
ProteinModelPortal:O77264 SMR:O77264 DIP:DIP-23093N
MINT:MINT-990359 STRING:O77264 PRIDE:O77264
EnsemblMetazoa:FBtr0070330 GeneID:31175 KEGG:dme:Dmel_CG4061
UCSC:CG4061-RA FlyBase:FBgn0025630 InParanoid:O77264
OrthoDB:EOG4R4XJ8 PhylomeDB:O77264 GenomeRNAi:31175 NextBio:772313
Bgee:O77264 GermOnline:CG4061 Uniprot:O77264
Length = 361
Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 69/243 (28%), Positives = 106/243 (43%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G Q+LR L LS + PV + IRA PGL + L LL I + VV +
Sbjct: 17 GGQALRNALSLSCILGKPVRVVKIRASRPSPGLSHQHLHGLNLLRDITNADVVGNYLLSS 76
Query: 72 ELEYKPGIVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPSVD 131
+E+ P ++ V + + SI + + V LFA +P + + G TN P V+
Sbjct: 77 TVEFTPRTILDNTYRV-ETHTAASITLIYQMALPVLLFAGRPSRLIVSGGTNVDFAPPVE 135
Query: 132 TFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTIPIVDRLMAVRWLDEGMVKR 191
+ LP LK FGV +LK++ G P G G L + V +L + + + G +K
Sbjct: 136 YMQEVLLPNLKHFGV---SFDLKVQRYGFYPRGQGRCQLDVQPVTKLNSGKLVAFGRIKS 192
Query: 192 IRGVSFST-RVSSQFENSMIHAARGIFNRLLPDVHIFTDH-RAGPQAGKSPGYGISLVAE 249
+ GV++ R+ M A+ +RL P + + Q G GI +
Sbjct: 193 VSGVAYCAGRLPVNIAIDMQQTAQREIHRLWPSQQCSIEPIKHSRQKAFHNGAGILMTVN 252
Query: 250 TTS 252
TTS
Sbjct: 253 TTS 255
>DICTYBASE|DDB_G0276159 [details] [associations]
symbol:rtc1 "RNA 3'-terminal phosphate cyclase"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003963 "RNA-3'-phosphate cyclase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 dictyBase:DDB_G0276159
GO:GO:0005524 GO:GO:0005654 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006396 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963 KO:K01974
OMA:RRGHYPK Gene3D:3.30.360.20 InterPro:IPR013791
TIGRFAMs:TIGR03399 EMBL:AF020279 RefSeq:XP_643263.1
ProteinModelPortal:O15746 STRING:O15746 EnsemblProtists:DDB0185053
GeneID:8620306 KEGG:ddi:DDB_G0276159 ProtClustDB:CLSZ2430913
Uniprot:O15746
Length = 433
Score = 192 (72.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 79/326 (24%), Positives = 139/326 (42%)
Query: 12 GSQSLRQRLVLSTLASTPVLIDDIRADDTMPGLRPHEISLLRLLERICDDCVVEINETGT 71
G Q LR + L++L + + I+ IR + PGL+ + + L+ R+ + +
Sbjct: 46 GGQILRNSVALASLFNKAISIEKIRYNRDQPGLKNQHKAGIDLMSRLFKAHLTGCSVGSC 105
Query: 72 ELEYKPG--IVMGGRNLVHDCGVSRSIGYFLEPLILVGLFAKKPISIRLRGITNDPKDPS 129
+L Y+P + + D + SI ++ + +FA + L G TN P+
Sbjct: 106 KLYYQPTQKTIQDDGVIEADTKTAGSICLMIQVSLPCLIFAPHSTKMVLGGGTNCDFAPA 165
Query: 130 VDTFRSTTLPLLKRFGVPSEGLELKIESRGSPPDGGGEVILTI-PIVDRLMAVRWLDEGM 188
D ++ LP+ G E + I+ RG P GGG V LT P+ L + +++G
Sbjct: 166 ADYIQNVFLPIATTMGFKCE---MSIDKRGFYPKGGGAVTLTTQPLTQPLSPITIVNKGE 222
Query: 189 VKRIRGVSFST--RVSSQFENSMIHAARGIFNRLLPDVHIFTDHRAGPQAGKSPGYGISL 246
V RI S+ T R+S M + A+ + + V + T+ + G I +
Sbjct: 223 VNRIVIKSYFTSPRISPLVAERMNNTAKKLIKKDFKKVDVETELIDVSKFSFGDGTFIEI 282
Query: 247 VAETTSGCFISVDTAVSYARGEVDEIEYDEKRELMPPDNVGEQIASCLLEEIAKGGVVDS 306
A T GC G + +P + V E A+ LL+++ GG +D
Sbjct: 283 RAYTDQGCIFGAT-----GNGAIG----------VPAEKVAEDAANSLLKDLQDGGCMDE 327
Query: 307 THQGLLFLLCALSEPDVSKVRVGKLS 332
Q L + AL++ S+++ G +S
Sbjct: 328 YLQDQLIIFMALAKGK-SQIKTGPIS 352
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 378 0.00089 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 605 (64 KB)
Total size of DFA: 220 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.53u 0.11s 29.64t Elapsed: 00:00:02
Total cpu time: 29.53u 0.11s 29.64t Elapsed: 00:00:02
Start: Tue May 21 03:20:40 2013 End: Tue May 21 03:20:42 2013