BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017074
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GZ92|BRXL4_ARATH Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2
SV=1
Length = 384
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/398 (70%), Positives = 318/398 (79%), Gaps = 34/398 (8%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSSTGSGSTKQQAIKSLTSQLKDMALKASGAYRHCSPC 60
MLTCIARSK+ GD+S QP+D DS KSLTSQLKDMALKASGAYRHC+PC
Sbjct: 1 MLTCIARSKRAGDESSGQPDDPDSKNA---------KSLTSQLKDMALKASGAYRHCTPC 51
Query: 61 TAPGAAQSR---LKSN----SGESDADSD-RFRWSYRRTGSS----------SSTTPRTT 102
TA +K+N S +SD +SD RF+ Y R+ SS PR
Sbjct: 52 TAAQGQGQGQGPIKNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRV- 110
Query: 103 WGKEMEARLKGISSSSGEATPIKSVSGR-RVDPVVFIEENEPKEWVAQVEPGVLITFVSL 161
WGKEMEARLKGISS GEATP KS SGR RVDP+VF+EE EPKEWVAQVEPGVLITFVSL
Sbjct: 111 WGKEMEARLKGISS--GEATP-KSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSL 167
Query: 162 PRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESS 221
P GGNDLKRIRFSRDMFNK QAQRWWA+NYD+VMELYNVQ+ +RQAFPLPTPPRSEDE++
Sbjct: 168 PGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPPRSEDENA 227
Query: 222 KIE-SVEESPVTPPLTRERLPRNLYRPTGMGMGYSSSDSLDHHPMQARNYYDSGGLTSTP 280
K+E E++P TPPL +ERLPR ++RP G+ YSSSDSLDH+ MQ++ +YDSG L STP
Sbjct: 228 KVEYHPEDTPATPPLNKERLPRTIHRPPGLA-AYSSSDSLDHNSMQSQQFYDSGLLNSTP 286
Query: 281 KLSSISGAKTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITIRAL 340
K+SSIS AKTETSS+DASIRSSSSRDADRS E+S+SNASD++ EWVEQDEPGVYITI+ L
Sbjct: 287 KVSSISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVL 346
Query: 341 PGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 378
PGGKRELRRVRFSRE+FGEMHARLWWEENRARIHEQYL
Sbjct: 347 PGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQYL 384
>sp|Q8GYL9|BRXL2_ARATH Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2
SV=1
Length = 374
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/391 (60%), Positives = 288/391 (73%), Gaps = 30/391 (7%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSSTGSG----STKQQAIKSLTSQLKDMALKASGAYRH 56
MLTCIA +KQ ++ + + + + + IKSLTSQ+KDMA+KASGAY+
Sbjct: 1 MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQIKSLTSQIKDMAVKASGAYKS 60
Query: 57 CSPCTAPGAAQSRLKSNSGESD--ADSDRFRWSYRRTGSSSSTTPRTTWGKEMEARLKGI 114
C PC+ G++ + +SD ++S RFR++Y+R GS SST P+ GKEME+RLKG
Sbjct: 61 CKPCS--GSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKIL-GKEMESRLKGF 116
Query: 115 SSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFS 174
S GE TP +S+SGR V EE+E KEWVAQVEPGVLITFVSLP GGND+KRIRFS
Sbjct: 117 LS--GEGTP-ESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFS 173
Query: 175 RDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVEESPVTPP 234
R+MF+KWQAQ+WWAEN+D+VMELYNVQ+FN+Q+ PLPTPPRSED SS+I+S + P TPP
Sbjct: 174 REMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPP 233
Query: 235 LTRERLPRNLYRPTGMGMGYSSSDSLDHHP---MQARNYYDSGGLTSTPKLSSISGAKTE 291
L +E G GY+SS SL H P Q+R ++DS GL +TPKLSSISG KTE
Sbjct: 234 LNKE---------CSRGKGYASSGSLAHQPTTQTQSR-HHDSSGLATTPKLSSISGTKTE 283
Query: 292 TSSMDASIRSSSSR---DADRSG-ELSISNASDLETEWVEQDEPGVYITIRALPGGKREL 347
TSS+D S RSS SR +AD SG ELS+SNASD+ETEWVEQDE GVYITIRALP G REL
Sbjct: 284 TSSVDESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTREL 343
Query: 348 RRVRFSREKFGEMHARLWWEENRARIHEQYL 378
RRVRFSREKFGE +ARLWWE+NRARI +QYL
Sbjct: 344 RRVRFSREKFGETNARLWWEQNRARIQQQYL 374
>sp|Q5HZ09|BRXL3_ARATH Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2
SV=2
Length = 370
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/408 (56%), Positives = 276/408 (67%), Gaps = 68/408 (16%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSSTGSGST--KQQAIKSLTSQLKDMALKASGAYRHCS 58
MLTCIA +KQ ++ + D G T +QAIKSLTSQLKDMA+KASGAY++C
Sbjct: 1 MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60
Query: 59 PCTAPGAAQSRLKSNSGESDA--DSDRFRWSYRRTGSSSSTTPRTTWGKEMEARLKGISS 116
PC+ G N +SDA DS RF +SY+R G+++ST P+ WG EME+RLKGISS
Sbjct: 61 PCS--GTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKI-WGNEMESRLKGISS 116
Query: 117 SSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRF--- 173
G T S+SGR + +VF+E++E KEWVAQVEPGVLITFVSLP+GGNDLKRIRF
Sbjct: 117 EEGTPT---SMSGR-TESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRST 172
Query: 174 -----------------------SRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPL 210
R+MFNKWQAQ+WW EN+++VMELYNVQ FN+Q+ PL
Sbjct: 173 RFPYYRDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQQSVPL 231
Query: 211 PTPPRSEDESSKIESVEESPVTPPLTRERLPRNLYRPTGMGMGYSSSDSLDHHPMQARNY 270
TPP SED S+I+SV++SPVTPPL RER RN+
Sbjct: 232 QTPPVSEDGGSQIQSVKDSPVTPPLERERPHRNIP------------------------- 266
Query: 271 YDSGGLTSTPKLSSISGAKTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDE 330
S G STPKLSSISG KTETSS+D S RSSS DRS E+S+SNASD+E+EWVEQDE
Sbjct: 267 -GSSGFASTPKLSSISGTKTETSSIDGSARSSS---VDRSEEVSVSNASDMESEWVEQDE 322
Query: 331 PGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 378
PG+YITIRALP G RELRRVRFSR+KFGE HARLWWE+NRARI +QYL
Sbjct: 323 PGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQYL 370
>sp|Q6YUB8|BRXL1_ORYSJ Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica
GN=BRXL1 PE=2 SV=1
Length = 397
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/411 (57%), Positives = 271/411 (65%), Gaps = 47/411 (11%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSST------GSGS----TKQQAIKSLTSQLKDMALKA 50
MLTCIA SKQ + E SD + G+G + +QAIK+LT+Q+KDMALKA
Sbjct: 1 MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKA 60
Query: 51 SGAYRHCSPCTAPGAAQS-----RLKSNSGESDADSDRFRWSYRRTGSSSSTTPRTTWGK 105
SGAYRHC PC ++ R +D+ SDRF ++YRR GS TP
Sbjct: 61 SGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHYAYRRAGSGGDATP------ 114
Query: 106 EMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGG 165
+ AR ++ E + G D E++E KEWVAQVEPGVLITF+SLP GG
Sbjct: 115 SVSARTDFLAGDEEEEEEEEEEEGTTADGS---EDDEAKEWVAQVEPGVLITFLSLPEGG 171
Query: 166 NDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIES 225
NDLKRIRFSR++FNKWQAQRWWAENY++VMELYNVQRFN+Q PLPT P+SEDES K
Sbjct: 172 NDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT-PLPTTPKSEDESLK--- 227
Query: 226 VEESPVTPPLTRERLPRNLYRPT--GMGMGYSSSDSL-------------DHHPMQARNY 270
E+ P TPPL ERLP L+R G GY DSL HH
Sbjct: 228 -EDIPATPPLNSERLPHTLHRSLTGGRTTGYGQPDSLGHQHNLGNGHRQQHHHCYTGHQC 286
Query: 271 YDSGGLTSTPKLSSISGAKTETSSMDASIRSSSS-RDADRSGEL--SISNASDLETEWVE 327
Y S GL STPKLSSISGAKTETSSMDAS+RSSSS + DRS EL S+SNASD E EWVE
Sbjct: 287 YGSVGLASTPKLSSISGAKTETSSMDASMRSSSSPEEVDRSRELSVSVSNASDQEREWVE 346
Query: 328 QDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 378
+DEPGVYITIRALPGG RELRRVRFSREKF EMHARLWWEENRARIH+QYL
Sbjct: 347 EDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQYL 397
>sp|Q17TI5|BRX_ARATH Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2
Length = 344
Score = 291 bits (746), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 234/392 (59%), Gaps = 62/392 (15%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSSTGSGSTKQQAIKSLTSQLKDMALKASGAYRHCSPC 60
M +CIA +K G + + + + G+ ++A+KSLT Q+KDMALK SGAY+ C PC
Sbjct: 1 MFSCIACTKADGGEEV----EHGARGGTTPNTKEAVKSLTIQIKDMALKFSGAYKQCKPC 56
Query: 61 TAPGAAQSRLK-SNSGESDADSDRFRWSYRRTGSSSSTTPRTTW-------GKEMEARLK 112
T G++ S LK + D D+ Y G S+ +TP + +E++
Sbjct: 57 T--GSSSSPLKKGHRSFPDYDNASEGVPYPFMGGSAGSTPAWDFTNSSHHPAGRLESKFT 114
Query: 113 GISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIR 172
I + E S+S + D V ++++ PKEW+AQVEPGV ITF SLP GGNDLKRIR
Sbjct: 115 SIYGNDRE-----SISAQSCD--VVLDDDGPKEWMAQVEPGVHITFASLPTGGNDLKRIR 167
Query: 173 FSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDES------SKIESV 226
FSR+MF+KWQAQRWW ENYD+++ELYNVQRFNRQA L TP RS+D+S SK++S
Sbjct: 168 FSREMFDKWQAQRWWGENYDKIVELYNVQRFNRQA--LQTPARSDDQSQRDSTYSKMDSA 225
Query: 227 EESPVTPPLTRERLPRNLYRPTGMGMGYSSSDSLDHHPMQARNYYDSGGLTSTPKLSSIS 286
ES ++ PR+ +RP G S+ HH + Y G P
Sbjct: 226 RES-------KDWTPRHNFRPPG---------SVPHHFYGGSSNYGPGSYHGGPP----- 264
Query: 287 GAKTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITIRALPGGKRE 346
MDA+ ++SSRD S+SNAS+++ EW+E+DEPGVYITIR L G RE
Sbjct: 265 --------MDAARTTTSSRD----DPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRE 312
Query: 347 LRRVRFSREKFGEMHARLWWEENRARIHEQYL 378
LRRVRFSRE+FGE+HA+ WWE+NR RI QYL
Sbjct: 313 LRRVRFSRERFGEVHAKTWWEQNRERIQTQYL 344
>sp|O82281|BRXL1_ARATH Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2
SV=2
Length = 331
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 176/390 (45%), Positives = 233/390 (59%), Gaps = 71/390 (18%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSSTGSGSTKQQAIKSLTSQLKDMALKASGAYRHCSPC 60
M TCI +K + +++ ST + ++A+KSLT+Q+KDMA K SG+++ P
Sbjct: 1 MFTCINCTKMADRGEEDEEDEARGSTTPNT--KEAVKSLTTQIKDMASKFSGSHKQSKP- 57
Query: 61 TAPGAAQSRLKSNSGESDADSDRFRWSYRRTGSSSSTTP-----RTTWGKEMEARLKGIS 115
PG++ S L+ D D+ Y G S+S+TP R+++ + + S
Sbjct: 58 -TPGSSSSNLRKFP---DFDTASESVPYPYPGGSTSSTPAWDLPRSSYHQSGRPDSRFTS 113
Query: 116 SSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSR 175
GE +S+S + D V +E++EPKEW+AQVEPGV ITFVSLP GGNDLKRIRFSR
Sbjct: 114 MYGGER---ESISAQSCD--VVLEDDEPKEWMAQVEPGVHITFVSLPSGGNDLKRIRFSR 168
Query: 176 DMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDES------SKIESVEES 229
++F+KWQAQRWW ENYDR++ELYNVQRFNRQA L TP RSED+S ++I+S ES
Sbjct: 169 EVFDKWQAQRWWGENYDRIVELYNVQRFNRQA--LQTPGRSEDQSQRDSTYTRIDSARES 226
Query: 230 PVTPPLTRERLPR-NLYRPTGMGMGYSSSDSLDHHPMQARNYYDSGGLTSTPKLSSISGA 288
R+ R N +RP G S+ HH +Y
Sbjct: 227 -------RDWTQRDNNFRPPG--------GSVPHH------FYG---------------- 249
Query: 289 KTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITIRALPGGKRELR 348
MDA+ ++SSRD S+SNAS+++ EWVE+DEPGVYITIR LP G RELR
Sbjct: 250 ----PPMDAARITTSSRDE----PPSMSNASEMQGEWVEEDEPGVYITIRQLPDGTRELR 301
Query: 349 RVRFSREKFGEMHARLWWEENRARIHEQYL 378
RVRFSRE+FGE+HA+ WWE+NR RI QYL
Sbjct: 302 RVRFSRERFGEVHAKTWWEQNRDRIQTQYL 331
>sp|Q84T65|BRXL4_ORYSJ Protein Brevis radix-like 4 OS=Oryza sativa subsp. japonica
GN=BRXL4 PE=3 SV=1
Length = 329
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 196/362 (54%), Gaps = 60/362 (16%)
Query: 42 QLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFRWSYRRTG---SSSSTT 98
QLKDM +K SG RH G+ R ++ S +R Y R G +
Sbjct: 3 QLKDMVMKLSGTSRHHGQQRRGGSPPPRGRTTS--------VYRSGYYRPGMVQDDMAVP 54
Query: 99 PRTTWGKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITF 158
P T G G S SS +TP + P E E +EWVAQVEPGV ITF
Sbjct: 55 PATYLGG------GGTSMSSASSTPAWDFA----RPA----EGEAREWVAQVEPGVQITF 100
Query: 159 VSLPRGG-NDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSE 217
VSL GG NDLKRIRFSR+M++KWQAQ+WW EN +R+MELYNV+RF+RQ LPTPPRS+
Sbjct: 101 VSLAGGGGNDLKRIRFSREMYDKWQAQKWWGENNERIMELYNVRRFSRQV--LPTPPRSD 158
Query: 218 DES-----SKIESVEESPV-TP---PLTRERLPR--NLYRPTGMGMGYSSSDSLDHHPMQ 266
D S++ S SP TP PLT +R+ RP S+S H +
Sbjct: 159 DGERESFYSQVGSTRGSPAATPSPAPLTPDRVTSWSAFVRPP------SASRQQQQHSFR 212
Query: 267 ARNYYDSGGLTSTPKL---------SSISGAKTETSSMDASIRSSSSRDADRSGELSISN 317
+ + + + S A + A S SSRD E+SISN
Sbjct: 213 PLSPPPPSSSNPSERAWQQQQQPQRAGKSPAAASDAMDAARTTSCSSRD-----EVSISN 267
Query: 318 ASDLE-TEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQ 376
AS+LE TEWV QDEPGVYIT+R L G RELRRVRFSRE+F E++A+LWWEEN+ RI Q
Sbjct: 268 ASELEVTEWVIQDEPGVYITVRELADGTRELRRVRFSRERFAELNAKLWWEENKERIQAQ 327
Query: 377 YL 378
YL
Sbjct: 328 YL 329
>sp|Q6ZIK7|BRXL2_ORYSJ Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica
GN=BRXL2 PE=2 SV=1
Length = 411
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Query: 286 SGAKTETSSMDASIRSSSSRDADRSGELSISNASDLE-TEWVEQDEPGVYITIRALPGGK 344
S A + D S ++SSRD +SISNASDLE TEWVEQDEPGV ITIR G
Sbjct: 321 SAAAGPAAPYDPSRGTTSSRD---EASVSISNASDLEATEWVEQDEPGVSITIREFGDGT 377
Query: 345 RELRRVRFSREKFGEMHARLWWEENRARIHEQYL 378
RELRRVRFSRE+FGE A++WWE+NR RIH QYL
Sbjct: 378 RELRRVRFSRERFGEERAKVWWEQNRDRIHAQYL 411
>sp|Q7XPT0|BRXL3_ORYSJ Putative protein Brevis radix-like 3 OS=Oryza sativa subsp.
japonica GN=BRXL3 PE=3 SV=2
Length = 213
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 108/220 (49%), Gaps = 30/220 (13%)
Query: 1 MLTCIARSKQPGDDSLSQPEDSDSSTGSGSTK-QQAIKSLTSQLKDMALKASGA--YRHC 57
ML CIA S + G + D S G+ + + A+KSLTSQLKDM LK SG+ ++H
Sbjct: 1 MLACIACSSKEGGE--------DGSRGAATPHGRDAVKSLTSQLKDMVLKFSGSNKHQHY 52
Query: 58 SPCTA--------------PGAAQSRLKSNSGESDADSDRFRWSYRRTGSSSSTTPRTTW 103
TA PG + ++ + + +++T TW
Sbjct: 53 KAATAGSPSFRSRSYRRPYPGFIDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATW 112
Query: 104 GKEMEARLKGISSSSGEA----TPIKSVSGRR-VDPVVFIEENEPKEWVAQVEPGVLITF 158
+G +G + T I+S+ D V +E+ P+EW AQVEPGV ITF
Sbjct: 113 DMTRSKSNRGWQQDAGRSPGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITF 172
Query: 159 VSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELY 198
V+LP GGNDLKRIRFSR+ F + +A+ WW N DR+ Y
Sbjct: 173 VTLPGGGNDLKRIRFSRERFGEDRAKVWWEHNRDRIQAQY 212
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%)
Query: 324 EWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 378
EW Q EPGV IT LPGG +L+R+RFSRE+FGE A++WWE NR RI QYL
Sbjct: 159 EWTAQVEPGVQITFVTLPGGGNDLKRIRFSRERFGEDRAKVWWEHNRDRIQAQYL 213
>sp|Q2QWK1|BRXL5_ORYSJ Putative protein Brevis radix-like 5 OS=Oryza sativa subsp.
japonica GN=BRXL5 PE=3 SV=1
Length = 323
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 324 EWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQY 377
EWVE+ EPGV+IT+ A PG + +LR V SREKFGE+ AR+WWEEN+AR+H Y
Sbjct: 268 EWVEEYEPGVFITVGAYPGHRLQLRCVELSREKFGEVKARVWWEENKARLHHLY 321
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 144 KEWVAQVEPGVLITFVSLPRG-GNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQR 202
+EWVA+ EPGVL+T G N L+RIRF ++F+ W AQ WWA+N+DR+ ELY + +
Sbjct: 109 REWVAEPEPGVLLTLAPRADGVSNRLRRIRFREEVFDAWAAQCWWADNHDRIAELYCLVK 168
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 144 KEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYN 199
+EWV + EPGV IT + P L+ + SR+ F + +A+ WW EN R+ LY+
Sbjct: 267 REWVEEYEPGVFITVGAYPGHRLQLRCVELSREKFGEVKARVWWEENKARLHHLYS 322
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 324 EWVEQDEPGVYITI--RALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQY 377
EWV + EPGV +T+ RA G LRR+RF E F A+ WW +N RI E Y
Sbjct: 110 EWVAEPEPGVLLTLAPRA-DGVSNRLRRIRFREEVFDAWAAQCWWADNHDRIAELY 164
>sp|P54839|HMCS_YEAST Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERG13 PE=1 SV=1
Length = 491
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 158 FVSLPRGGNDLKRIR-FSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFP---LPTP 213
VS P G + L ++ F ++F+ + ++Y R+ LYN R N Q FP
Sbjct: 274 LVSDPAGSDALNVLKYFDYNVFH-VPTCKLVTKSYGRL--LYNDFRANPQLFPEVDAELA 330
Query: 214 PRSEDESSKIESVEES--PVTPPLTRERLPRNLYRPTGMGMGYSSS 257
R DES +++E++ V P +ER+ ++L PT G Y++S
Sbjct: 331 TRDYDESLTDKNIEKTFVNVAKPFHKERVAQSLIVPTNTGNMYTAS 376
>sp|B2G6M9|DAPA_LACRJ 4-hydroxy-tetrahydrodipicolinate synthase OS=Lactobacillus reuteri
(strain JCM 1112) GN=dapA PE=3 SV=1
Length = 307
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 194 VMELYNVQRFNRQAFPLPTPPRSEDESSKIESVEESPVTPPLTRERLPRNL 244
V + N Q FN + LP P +E+E K+E+ P T LT + LP NL
Sbjct: 256 VKAVLNAQGFNVGSCRLPILPLNEEEKRKLETALSLP-TNSLTAKNLPLNL 305
>sp|A5VJ58|DAPA_LACRD 4-hydroxy-tetrahydrodipicolinate synthase OS=Lactobacillus reuteri
(strain DSM 20016) GN=dapA PE=3 SV=1
Length = 307
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 194 VMELYNVQRFNRQAFPLPTPPRSEDESSKIESVEESPVTPPLTRERLPRNL 244
V + N Q FN + LP P +E+E K+E+ P T LT + LP NL
Sbjct: 256 VKAVLNAQGFNVGSCRLPILPLNEEEKRKLETALSLP-TNSLTAKNLPLNL 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,300,942
Number of Sequences: 539616
Number of extensions: 6163625
Number of successful extensions: 17254
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 16317
Number of HSP's gapped (non-prelim): 825
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)