Query 017074
Match_columns 378
No_of_seqs 193 out of 231
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 08:30:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017074.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017074hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ctda2 g.37.1.1 (A:61-90) Zin 44.4 3.4 0.00025 26.2 0.9 12 1-12 2-13 (30)
2 d1rk8c_ b.72.3.1 (C:) Pym (Wit 35.6 8.2 0.0006 24.9 1.7 24 328-351 4-28 (33)
3 d1wjva2 g.37.1.2 (A:36-66) Cel 22.7 6.9 0.0005 25.1 -0.4 11 1-11 2-12 (31)
4 d2g3wa1 c.52.1.33 (A:4-182) Hy 17.7 22 0.0016 30.0 1.6 26 177-202 103-128 (179)
5 d2g3wa1 c.52.1.33 (A:4-182) Hy 17.6 26 0.0019 29.6 2.1 19 357-375 104-122 (179)
6 d1xata_ b.81.1.3 (A:) Xenobiot 9.7 22 0.0016 29.3 -0.8 33 166-199 157-189 (208)
7 d1xata_ b.81.1.3 (A:) Xenobiot 9.4 27 0.002 28.7 -0.4 31 345-376 157-187 (208)
8 d1gvha2 b.43.4.2 (A:147-253) F 9.2 1.4E+02 0.01 21.1 3.7 20 327-346 35-54 (107)
9 d1qxya_ d.127.1.1 (A:) Methion 8.9 59 0.0043 26.0 1.6 14 157-170 235-248 (249)
10 d1zroa2 a.264.1.1 (A:283-596) 8.9 65 0.0047 28.5 2.0 17 361-377 163-179 (314)
No 1
>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.41 E-value=3.4 Score=26.17 Aligned_cols=12 Identities=42% Similarity=0.504 Sum_probs=10.7
Q ss_pred CcccccccCCCC
Q 017074 1 MLTCIARSKQPG 12 (378)
Q Consensus 1 MltCIacsk~~~ 12 (378)
|+||-.|-||+.
T Consensus 2 ~ftc~hcgkqlk 13 (30)
T d2ctda2 2 MFTCHHCGKQLR 13 (30)
T ss_dssp CCCCSSSCCCCS
T ss_pred ceechhHHHHHh
Confidence 899999999874
No 2
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=35.62 E-value=8.2 Score=24.90 Aligned_cols=24 Identities=38% Similarity=0.667 Sum_probs=19.9
Q ss_pred ecCCceEEEEEeCCCCc-cceeEEe
Q 017074 328 QDEPGVYITIRALPGGK-RELRRVR 351 (378)
Q Consensus 328 Q~EPGVYITl~~~p~G~-k~LKRVR 351 (378)
+++-|-||.-...|||+ +.-|||+
T Consensus 4 ~d~~G~~i~atqRpDGtWRK~rrvk 28 (33)
T d1rk8c_ 4 QSSEGKFIPATKRPDGTWRKARRVK 28 (33)
T ss_dssp EETTEEEECCEECTTSCEECCEECC
T ss_pred ecCCCcEeccccCCCCccccceecc
Confidence 46779999999999998 6667764
No 3
>d1wjva2 g.37.1.2 (A:36-66) Cell growth regulating nucleolar protein LyaR {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.67 E-value=6.9 Score=25.07 Aligned_cols=11 Identities=36% Similarity=0.555 Sum_probs=8.8
Q ss_pred CcccccccCCC
Q 017074 1 MLTCIARSKQP 11 (378)
Q Consensus 1 MltCIacsk~~ 11 (378)
+|+||-|.+.-
T Consensus 2 ~~sCiDC~~~F 12 (31)
T d1wjva2 2 CLSCIDCGKDF 12 (31)
T ss_dssp EEEETTTTEEE
T ss_pred cEEEeecCCcc
Confidence 48999999854
No 4
>d2g3wa1 c.52.1.33 (A:4-182) Hypothetical protein XAC2396 {Xanthomonas axonopodis pv. citri [TaxId: 92829]}
Probab=17.69 E-value=22 Score=30.02 Aligned_cols=26 Identities=12% Similarity=0.408 Sum_probs=20.7
Q ss_pred ccChHHHHHHHHHhhhHHHHHhcccc
Q 017074 177 MFNKWQAQRWWAENYDRVMELYNVQR 202 (378)
Q Consensus 177 ~F~e~qAq~WW~eN~~rV~e~Ynv~~ 202 (378)
.|+...++.||..|..++...-|+..
T Consensus 103 ~yg~r~~~~Ww~~~~~kl~r~~nl~V 128 (179)
T d2g3wa1 103 GYGGQATETWWKKHANAMGRYRNLRV 128 (179)
T ss_dssp ECCTHHHHHHHHHHHHHHTTCSSEEE
T ss_pred EeCCchHHHHHHHhHHHhhCcCCcEE
Confidence 46677889999999999987766543
No 5
>d2g3wa1 c.52.1.33 (A:4-182) Hypothetical protein XAC2396 {Xanthomonas axonopodis pv. citri [TaxId: 92829]}
Probab=17.61 E-value=26 Score=29.56 Aligned_cols=19 Identities=16% Similarity=0.716 Sum_probs=15.7
Q ss_pred cchHHHHHHHHHHHhhhhh
Q 017074 357 FGEMHARLWWEENRARIHE 375 (378)
Q Consensus 357 F~e~qA~~WW~eN~~RI~e 375 (378)
|+...++.||..|+.++..
T Consensus 104 yg~r~~~~Ww~~~~~kl~r 122 (179)
T d2g3wa1 104 YGGQATETWWKKHANAMGR 122 (179)
T ss_dssp CCTHHHHHHHHHHHHHHTT
T ss_pred eCCchHHHHHHHhHHHhhC
Confidence 5566789999999999864
No 6
>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=9.69 E-value=22 Score=29.31 Aligned_cols=33 Identities=15% Similarity=0.394 Sum_probs=23.8
Q ss_pred ccceEEEeehhccChHHHHHHHHHhhhHHHHHhc
Q 017074 166 NDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYN 199 (378)
Q Consensus 166 k~LKRVRFSR~~F~e~qAq~WW~eN~~rV~e~Yn 199 (378)
|.+|+ ||+.+.+..-..-+||.-..++|.+.+.
T Consensus 157 k~ik~-R~~~~~i~~l~~~~w~~~~~~~~~~~~~ 189 (208)
T d1xata_ 157 RTIRK-RFSDGDIQNLLEMAWWDWPLADIEAAMP 189 (208)
T ss_dssp EEEEE-SSCHHHHHHHHHHCGGGSCHHHHHHSHH
T ss_pred EEEec-cCCHHHHHHHHHhccccCCHHHHHHHHH
Confidence 55555 7777776666677999977777777654
No 7
>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=9.35 E-value=27 Score=28.74 Aligned_cols=31 Identities=29% Similarity=0.614 Sum_probs=21.8
Q ss_pred cceeEEeeehhccchHHHHHHHHHHHhhhhhh
Q 017074 345 RELRRVRFSREKFGEMHARLWWEENRARIHEQ 376 (378)
Q Consensus 345 k~LKRVRFSR~~F~e~qA~~WW~eN~~RI~e~ 376 (378)
|.+|+ ||+.+.+..-..-.||.-..++|.+.
T Consensus 157 k~ik~-R~~~~~i~~l~~~~w~~~~~~~~~~~ 187 (208)
T d1xata_ 157 RTIRK-RFSDGDIQNLLEMAWWDWPLADIEAA 187 (208)
T ss_dssp EEEEE-SSCHHHHHHHHHHCGGGSCHHHHHHS
T ss_pred EEEec-cCCHHHHHHHHHhccccCCHHHHHHH
Confidence 56666 78876666556668999777777664
No 8
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]}
Probab=9.19 E-value=1.4e+02 Score=21.06 Aligned_cols=20 Identities=25% Similarity=0.489 Sum_probs=15.4
Q ss_pred eecCCceEEEEEeCCCCccc
Q 017074 327 EQDEPGVYITIRALPGGKRE 346 (378)
Q Consensus 327 EQ~EPGVYITl~~~p~G~k~ 346 (378)
-.++||-||+|.+..+|...
T Consensus 35 ~~~~pGQ~v~l~~~~~~~~~ 54 (107)
T d1gvha2 35 AEYRPGQYLGVWLKPEGFPH 54 (107)
T ss_dssp CCCCTTCEEEEEECCTTCSS
T ss_pred cCCCCCCEEEEEeeccccCc
Confidence 35899999999887666543
No 9
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]}
Probab=8.88 E-value=59 Score=25.98 Aligned_cols=14 Identities=14% Similarity=0.055 Sum_probs=8.1
Q ss_pred EEEeCCCCCccceE
Q 017074 157 TFVSLPRGGNDLKR 170 (378)
Q Consensus 157 Tl~~~p~G~k~LKR 170 (378)
|+.+..+|...|-|
T Consensus 235 tvlVTe~G~e~LT~ 248 (249)
T d1qxya_ 235 TVIVTKDGPILTTK 248 (249)
T ss_dssp EEECCTTCCEETTC
T ss_pred EEEEcCCccEeCCC
Confidence 45555666665554
No 10
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II {Plasmodium falciparum [TaxId: 5833]}
Probab=8.87 E-value=65 Score=28.49 Aligned_cols=17 Identities=12% Similarity=0.474 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhhhhhhc
Q 017074 361 HARLWWEENRARIHEQY 377 (378)
Q Consensus 361 qA~~WW~eN~~RI~e~Y 377 (378)
.-+.||++|+..|-+-+
T Consensus 163 ~R~~WW~~n~~~IW~aM 179 (314)
T d1zroa2 163 FRDEWWKVIKKDVWNVI 179 (314)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHhh
Confidence 46789999999887654
Done!