Query 017078
Match_columns 377
No_of_seqs 150 out of 1389
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:34:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017078.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017078hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.5E-81 5.2E-86 603.3 24.0 369 6-377 4-422 (427)
2 3qb0_A Actin-related protein 4 100.0 8.6E-80 2.9E-84 595.9 27.9 368 1-377 17-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 3.6E-77 1.2E-81 568.5 31.4 374 4-377 2-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 2.6E-76 8.9E-81 565.3 15.6 372 3-374 2-388 (394)
5 4fo0_A Actin-related protein 8 100.0 1.1E-72 3.6E-77 569.0 23.4 370 7-377 15-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 5.6E-71 1.9E-75 533.6 28.4 370 5-376 3-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 7.2E-60 2.5E-64 459.3 26.6 363 4-377 37-652 (655)
8 1jce_A ROD shape-determining p 100.0 1.8E-36 6.1E-41 285.1 19.0 307 8-355 4-330 (344)
9 2v7y_A Chaperone protein DNAK; 99.9 8.4E-27 2.9E-31 229.7 7.2 297 8-351 3-350 (509)
10 3h1q_A Ethanolamine utilizatio 99.9 3.1E-24 1.1E-28 194.9 15.9 244 7-349 28-272 (272)
11 1dkg_D Molecular chaperone DNA 99.9 8E-25 2.7E-29 208.6 12.1 304 8-351 3-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.9 3.5E-24 1.2E-28 204.9 11.3 299 7-351 18-392 (394)
13 3i33_A Heat shock-related 70 k 99.9 4E-23 1.4E-27 198.1 8.5 302 6-351 22-400 (404)
14 2kho_A Heat shock protein 70; 99.9 2.3E-21 7.8E-26 194.4 13.6 297 8-351 3-381 (605)
15 1yuw_A Heat shock cognate 71 k 99.8 1.1E-20 3.6E-25 187.8 15.5 232 82-350 118-378 (554)
16 3d2f_A Heat shock protein homo 99.8 1.1E-20 3.7E-25 191.0 11.4 232 82-351 117-382 (675)
17 4gni_A Putative heat shock pro 99.8 1.1E-20 3.7E-25 181.5 8.8 238 82-352 129-401 (409)
18 4b9q_A Chaperone protein DNAK; 99.8 2.8E-19 9.7E-24 179.2 8.2 301 8-351 3-381 (605)
19 2ych_A Competence protein PILM 99.7 7.8E-18 2.7E-22 159.8 13.8 171 119-320 154-331 (377)
20 2fsj_A Hypothetical protein TA 99.7 7.7E-18 2.6E-22 157.6 8.3 179 8-198 22-240 (346)
21 4a2a_A Cell division protein F 99.7 3.1E-16 1.1E-20 150.0 14.7 199 115-351 167-393 (419)
22 2zgy_A Plasmid segregation pro 99.6 8.3E-15 2.8E-19 135.7 11.1 288 9-350 2-320 (320)
23 4apw_A ALP12; actin-like prote 99.5 2.8E-14 9.7E-19 132.4 6.1 185 3-197 3-219 (329)
24 3js6_A Uncharacterized PARM pr 99.4 3.8E-13 1.3E-17 125.9 8.1 186 7-198 4-232 (355)
25 2d0o_A DIOL dehydratase-reacti 98.9 1.4E-09 4.7E-14 103.7 7.6 177 138-348 390-601 (610)
26 1nbw_A Glycerol dehydratase re 98.9 1.2E-09 4E-14 104.5 7.0 177 138-348 392-603 (607)
27 4ehu_A Activator of 2-hydroxyi 98.6 3.1E-08 1E-12 89.4 5.0 51 292-350 203-253 (276)
28 1hux_A Activator of (R)-2-hydr 97.7 9.1E-05 3.1E-09 66.2 8.7 48 296-351 209-256 (270)
29 2gup_A ROK family protein; sug 96.7 0.008 2.7E-07 54.0 10.1 53 120-175 86-143 (292)
30 1t6c_A Exopolyphosphatase; alp 96.6 0.0035 1.2E-07 57.1 6.6 74 115-191 96-177 (315)
31 2ews_A Pantothenate kinase; PA 96.2 0.027 9.2E-07 50.3 10.1 50 295-349 236-286 (287)
32 4htl_A Beta-glucoside kinase; 96.1 0.27 9.4E-06 44.0 16.4 51 298-350 240-290 (297)
33 3vgl_A Glucokinase; ROK family 96.0 0.11 3.7E-06 47.2 13.5 50 123-174 90-146 (321)
34 3mdq_A Exopolyphosphatase; str 96.0 0.0036 1.2E-07 57.0 3.2 73 116-191 89-170 (315)
35 3cer_A Possible exopolyphospha 95.9 0.0093 3.2E-07 55.0 5.7 75 116-191 102-191 (343)
36 4db3_A Glcnac kinase, N-acetyl 95.7 0.15 5.1E-06 46.4 13.2 52 298-349 272-324 (327)
37 1u6z_A Exopolyphosphatase; alp 95.7 0.02 6.8E-07 55.8 7.5 73 116-191 96-176 (513)
38 3r8e_A Hypothetical sugar kina 95.6 0.13 4.3E-06 46.8 12.0 50 124-175 112-169 (321)
39 3hi0_A Putative exopolyphospha 95.5 0.042 1.4E-06 53.4 8.9 72 116-190 100-178 (508)
40 2i7n_A Pantothenate kinase 1; 95.3 0.04 1.4E-06 50.7 7.5 55 293-349 303-358 (360)
41 2qm1_A Glucokinase; alpha-beta 95.1 0.058 2E-06 49.0 8.1 50 123-174 102-158 (326)
42 3vov_A Glucokinase, hexokinase 94.6 0.41 1.4E-05 42.9 12.3 51 123-175 92-149 (302)
43 3cet_A Conserved archaeal prot 94.0 0.026 9E-07 51.0 2.8 25 150-174 127-151 (334)
44 3djc_A Type III pantothenate k 91.9 0.9 3.1E-05 39.9 9.6 18 9-26 4-21 (266)
45 1z6r_A MLC protein; transcript 91.5 2.2 7.6E-05 39.7 12.5 50 124-175 181-237 (406)
46 2h3g_X Biosynthetic protein; p 91.3 0.86 2.9E-05 40.1 8.8 18 10-27 3-20 (268)
47 3zx3_A Ectonucleoside triphosp 88.2 1.2 4.1E-05 42.2 7.7 89 82-171 89-202 (452)
48 3bex_A Type III pantothenate k 87.1 1.7 5.7E-05 37.8 7.4 19 9-27 5-23 (249)
49 1zbs_A Hypothetical protein PG 84.7 4.9 0.00017 35.5 9.5 69 104-173 62-132 (291)
50 1zc6_A Probable N-acetylglucos 75.3 24 0.00082 31.1 10.8 89 81-173 53-145 (305)
51 2e2o_A Hexokinase; acetate and 74.2 12 0.00042 32.8 8.6 55 104-160 62-117 (299)
52 2yhw_A Bifunctional UDP-N-acet 71.4 6.8 0.00023 35.4 6.3 46 127-174 129-181 (343)
53 2aa4_A Mannac kinase, putative 71.2 14 0.00047 32.3 8.1 50 122-174 89-145 (289)
54 2ap1_A Putative regulator prot 69.3 10 0.00036 33.8 7.0 51 123-175 114-171 (327)
55 3aap_A Ectonucleoside triphosp 67.0 3.4 0.00011 37.9 3.1 36 150-185 140-177 (353)
56 3mcp_A Glucokinase; structural 66.6 42 0.0014 30.6 10.5 53 121-175 100-172 (366)
57 2ch5_A NAGK protein; transfera 66.2 25 0.00085 31.5 8.9 90 81-172 49-143 (347)
58 2f9w_A Pantothenate kinase; CO 60.6 21 0.00072 31.2 6.9 17 9-25 25-41 (271)
59 2aa4_A Mannac kinase, putative 56.9 4.6 0.00016 35.5 2.0 51 298-349 236-286 (289)
60 1zxo_A Conserved hypothetical 56.0 7 0.00024 34.4 3.1 53 121-173 76-130 (291)
61 1saz_A Probable butyrate kinas 56.0 31 0.001 31.7 7.6 51 297-351 297-348 (381)
62 2hoe_A N-acetylglucosamine kin 49.5 31 0.0011 31.5 6.5 51 123-175 182-237 (380)
63 2hoe_A N-acetylglucosamine kin 47.6 10 0.00035 34.8 2.9 53 298-350 317-370 (380)
64 1woq_A Inorganic polyphosphate 47.2 1.3E+02 0.0045 25.5 11.1 53 121-175 106-166 (267)
65 3epq_A Putative fructokinase; 44.4 15 0.00052 32.5 3.4 52 122-175 90-148 (302)
66 3htv_A D-allose kinase, alloki 39.8 23 0.00077 31.5 3.8 61 298-358 242-306 (310)
67 2yhx_A Hexokinase B; transfera 37.0 26 0.00089 33.2 3.9 51 298-351 386-442 (457)
68 2itm_A Xylulose kinase, xylulo 35.5 18 0.0006 34.5 2.5 48 296-351 387-434 (484)
69 3djc_A Type III pantothenate k 35.4 67 0.0023 27.8 6.0 49 152-200 4-53 (266)
70 1saz_A Probable butyrate kinas 34.3 26 0.0009 32.1 3.4 53 121-175 112-200 (381)
71 2zf5_O Glycerol kinase; hypert 32.8 35 0.0012 32.5 4.1 47 296-351 394-440 (497)
72 2yrb_A Protein fantom; beta sa 31.6 19 0.00065 28.5 1.6 67 129-198 22-89 (156)
73 3eno_A Putative O-sialoglycopr 31.4 27 0.00094 31.4 2.9 27 296-322 250-276 (334)
74 2dpn_A Glycerol kinase; thermu 30.1 41 0.0014 32.0 4.1 46 297-351 400-445 (495)
75 3qbx_A Anhydro-N-acetylmuramic 30.1 15 0.00051 33.6 0.9 23 297-319 285-307 (371)
76 3cj1_A Ectonucleoside triphosp 29.8 34 0.0011 32.4 3.3 22 150-171 190-211 (456)
77 2ivn_A O-sialoglycoprotein end 29.0 24 0.00081 31.7 2.1 35 296-335 245-279 (330)
78 2ap1_A Putative regulator prot 29.0 13 0.00044 33.3 0.2 52 298-349 272-324 (327)
79 1bdg_A Hexokinase; phosphotran 28.3 37 0.0013 32.1 3.3 50 299-351 396-446 (451)
80 2e2o_A Hexokinase; acetate and 28.2 18 0.00061 31.8 1.1 45 298-350 242-286 (299)
81 3cqy_A Anhydro-N-acetylmuramic 26.8 17 0.00059 33.2 0.7 23 297-319 291-313 (370)
82 2w40_A Glycerol kinase, putati 26.7 51 0.0018 31.4 4.1 46 297-351 409-454 (503)
83 4e1j_A Glycerol kinase; struct 25.8 56 0.0019 31.3 4.2 47 296-351 426-472 (520)
84 2q2r_A Glucokinase 1, putative 24.8 18 0.00062 33.0 0.5 53 121-174 119-205 (373)
85 4g9i_A Hydrogenase maturation 23.8 25 0.00085 35.7 1.3 27 296-322 706-732 (772)
86 3vgl_A Glucokinase; ROK family 23.1 1.3E+02 0.0045 26.4 6.0 54 298-351 255-312 (321)
87 1cza_N Hexokinase type I; stru 22.8 30 0.001 36.0 1.6 50 298-351 409-459 (917)
88 3ll3_A Gluconate kinase; xylul 22.4 66 0.0022 30.7 4.0 47 296-351 394-440 (504)
89 2ch5_A NAGK protein; transfera 22.3 42 0.0014 30.0 2.4 49 298-349 268-322 (347)
90 3hz6_A Xylulokinase; xylulose, 20.7 36 0.0012 32.6 1.7 47 296-351 403-450 (511)
91 2d4w_A Glycerol kinase; alpha 20.4 72 0.0025 30.4 3.7 47 296-351 404-450 (504)
92 3i8b_A Xylulose kinase; strain 20.3 46 0.0016 31.9 2.3 46 297-351 426-471 (515)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-81 Score=603.29 Aligned_cols=369 Identities=37% Similarity=0.681 Sum_probs=321.8
Q ss_pred CCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCC----------------------CccccCCCcceeeccccccc
Q 017078 6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT----------------------GVMVGMGQKDAYVGDEAQSK 63 (377)
Q Consensus 6 ~~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~----------------------~~~~~~~~~~~~vg~~~~~~ 63 (377)
+.++||||+||+++|+||+|++.|+.+|||+++++++. ..+.+..+++.+||+++...
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 67899999999999999999999999999999998854 11224456688999999887
Q ss_pred cC-cceeeccccCCccCCHHHHHHHHHHHhccccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhh
Q 017078 64 RG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL 142 (377)
Q Consensus 64 ~~-~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~ 142 (377)
+. .+.+++|+++|.|.|||++|++|+|+|++.|++++.++|+++++|+++++..|+++++++||.|++++++++.++++
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 64 68899999999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred hhhccC--------CceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHHHH
Q 017078 143 SLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDM 214 (377)
Q Consensus 143 a~~~~g--------~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~i 214 (377)
|+|++| .++|+|||+|++.|+|+||++|+++.+++.++++||++++++|.++|.++++. ..+.+.++++
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~I 240 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERI 240 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHH
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHH
Confidence 999998 68999999999999999999999999999999999999999999999887765 3456889999
Q ss_pred hHhccccccCHHHHHhhccCCCCccceEEc--CCCc--EEeeCCcccccccccCCCccCCCc-CCCHHHHHHHHHhcCCh
Q 017078 215 KEKLAYIALDYEQELETSKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDV 289 (377)
Q Consensus 215 k~~~~~v~~~~~~~~~~~~~~~~~~~~~~l--pd~~--~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~ 289 (377)
|+++||++.+++++++.........+.|.+ |||. .+.++.+||++||+||+|++++.+ ..+|+++|.++|.+||+
T Consensus 241 Ke~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~ 320 (427)
T 3dwl_A 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPI 320 (427)
T ss_dssp HHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCH
T ss_pred HHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCH
Confidence 999999999998887765443334566777 8887 788999999999999999999888 48999999999999999
Q ss_pred hHHHHhhcCceeccCCCCCCChHHHHHHHHHhhC--------------CCCceEEEECCCCCccceehhhHHhhcccccc
Q 017078 290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355 (377)
Q Consensus 290 ~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~ 355 (377)
|+|+.|++|||||||+|++|||.+||++||+.+. |...+++|..+++|.+++|+||||+|++.+|+
T Consensus 321 dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~ 400 (427)
T 3dwl_A 321 DVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFG 400 (427)
T ss_dssp HHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTHH
T ss_pred HHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccchh
Confidence 9999999999999999999999999999999887 44567899999999999999999999999999
Q ss_pred cccccHHHHhhcCCcccccccC
Q 017078 356 QMWIAKAEYDESGPSIVHRKCF 377 (377)
Q Consensus 356 ~~~itr~~y~e~G~~~~~~k~~ 377 (377)
++||||+||+|+|+++++||++
T Consensus 401 ~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 401 SYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHSEEHHHHHHSCGGGGSCCCC
T ss_pred heeEEHHHHhhhChHhheeccc
Confidence 9999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-80 Score=595.95 Aligned_cols=368 Identities=31% Similarity=0.571 Sum_probs=332.2
Q ss_pred CCCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCccccCCCcceeeccc-cccccCcceeeccccCCccC
Q 017078 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVS 79 (377)
Q Consensus 1 ~~~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~ 79 (377)
|.++++..+||||+||+++|+||+|++.|+.++||+++++++.. .++.+||++ +...++.+.+++|+++|.|.
T Consensus 17 ~yggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~ 90 (498)
T 3qb0_A 17 VYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVI 90 (498)
T ss_dssp --CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEES
T ss_pred ccCCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEc
Confidence 35789999999999999999999999999999999999987642 456789997 55557778999999999999
Q ss_pred CHHHHHHHHHHHhccccCCCCCCC-cEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCceEEEEeCC
Q 017078 80 NWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158 (377)
Q Consensus 80 ~~~~~~~~~~~~~~~~L~~~~~~~-~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG 158 (377)
||++++++|+|+|.+.|++++.++ |++|++|++++...|+++++++||.|++++++++++++||+|++|+++|||||+|
T Consensus 91 dwd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG 170 (498)
T 3qb0_A 91 DWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIG 170 (498)
T ss_dssp CHHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEEC
T ss_pred cHHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcC
Confidence 999999999999988899999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhc------------------CCCccch------h-HHHHHHH
Q 017078 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTER------------------GYSFTTT------A-EREIVRD 213 (377)
Q Consensus 159 ~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~ 213 (377)
++.|+|+||++|+++.+++.++++||++++++|.++|.++ ++.+... . +.+++++
T Consensus 171 ~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~ 250 (498)
T 3qb0_A 171 HDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQE 250 (498)
T ss_dssp SSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHH
T ss_pred CCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999864 3333221 2 3458999
Q ss_pred HhHhccccccC--HHHHHhhccCCCCccceEEcCCCcEEeeCCc-ccccccccCCCccCCC-------------------
Q 017078 214 MKEKLAYIALD--YEQELETSKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGM------------------- 271 (377)
Q Consensus 214 ik~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~-~~~~~E~lf~p~~~~~------------------- 271 (377)
+|+++|||+.+ ++.+.... .....+.|++|||+.|.++.+ ||++||.||+|++++.
T Consensus 251 iKE~~c~Va~~~~~~~~~~~~--~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y 328 (498)
T 3qb0_A 251 CKETLCHICPTKTLEETKTEL--SSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDY 328 (498)
T ss_dssp HHHHTCCCCSSCHHHHHHHHH--HTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCC
T ss_pred HHHhhEEecCCccHhHHhhhc--cCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccc
Confidence 99999999987 44432221 133578999999999999999 9999999999987643
Q ss_pred -------------------------------------------------------------cCCCHHHHHHHHHhcCChh
Q 017078 272 -------------------------------------------------------------EAAGIHETTYNSIMKCDVD 290 (377)
Q Consensus 272 -------------------------------------------------------------~~~~l~~~I~~~i~~~~~~ 290 (377)
+..||+++|.++|++||.|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d 408 (498)
T 3qb0_A 329 VPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVD 408 (498)
T ss_dssp CCCCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHH
Confidence 5679999999999999999
Q ss_pred HHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECC---CCCccceehhhHHhhcccccccccccHHHHhhc
Q 017078 291 IRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKAEYDES 367 (377)
Q Consensus 291 ~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~ 367 (377)
+|+.|++||||+||+|++|||.+||++||+.+.| ..+++|.++ ++|.+++|+||||+|++.+|+++||||+||+|+
T Consensus 409 ~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~ 487 (498)
T 3qb0_A 409 LRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEV 487 (498)
T ss_dssp THHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTT
T ss_pred HHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhh
Confidence 9999999999999999999999999999999999 789999987 789999999999999999999999999999999
Q ss_pred CC-cccccccC
Q 017078 368 GP-SIVHRKCF 377 (377)
Q Consensus 368 G~-~~~~~k~~ 377 (377)
|+ .||+|||.
T Consensus 488 G~~~iv~~kc~ 498 (498)
T 3qb0_A 488 GVERLLNDRFR 498 (498)
T ss_dssp CCHHHHHHTTC
T ss_pred CcHhhccccCc
Confidence 99 89999994
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=3.6e-77 Score=568.45 Aligned_cols=374 Identities=87% Similarity=1.389 Sum_probs=341.9
Q ss_pred CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCccccCCCcceeeccccccccCcceeeccccCCccCCHHH
Q 017078 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~ 83 (377)
.++.++||||+||+++|+||++++.|+.++||+++++++...+.+...++.++|+++...++...+++|+++|.+.||+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 46789999999999999999999999999999999998876555555678899999988888889999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCceEEEEeCCCCceE
Q 017078 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 163 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~ 163 (377)
++.+|+|+|++.|++++.++++++++|+.++..+|+++++++||.+++++++++++|+||+|++|..+++|||+|+++|+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhHhccccccCHHHHHhhccCCCCccceEE
Q 017078 164 TVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYE 243 (377)
Q Consensus 164 i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
|+||++|.++.++...+++||++++++|.++|..+++++....+.+.++++|+++|+++.++.++++....+......|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 99999999998888999999999999999999988888876667889999999999999888877665544444578999
Q ss_pred cCCCcEEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhC
Q 017078 244 LPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA 323 (377)
Q Consensus 244 lpd~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~ 323 (377)
+|||+.+.++.+||.++|.||+|.+++.+..+|.++|.++|.+||.++|+.+++||+||||+|++|||.+||++||..+.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEECCCCCccceehhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017078 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377 (377)
Q Consensus 324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
|...++++..+++|.+++|+||+++|++..|+++||||+||+|+|+++++||||
T Consensus 322 p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 988889999999999999999999999999999999999999999999999997
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.6e-76 Score=565.34 Aligned_cols=372 Identities=47% Similarity=0.885 Sum_probs=163.7
Q ss_pred CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCcc-c-cCCCcceeeccccccccCcceeeccccCCccCC
Q 017078 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~-~-~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~ 80 (377)
.+.+.++||||+||+++|+||++++.|++++||+++++++.... . +...++.++|+++...++...+++|+++|.+.|
T Consensus 2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d 81 (394)
T 1k8k_B 2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN 81 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence 34567899999999999999999999999999999998775432 1 233467899999988877788999999999999
Q ss_pred HHHHHHHHHHHh-ccccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCceEEEEeCCC
Q 017078 81 WDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159 (377)
Q Consensus 81 ~~~~~~~~~~~~-~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~ 159 (377)
|+.++.+|+|+| ++.|++++.++++++++|+.++...|+++++++||.+++++++++++|+||+|++|..+++|||+|+
T Consensus 82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~ 161 (394)
T 1k8k_B 82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD 161 (394)
T ss_dssp ------------------------------------------------------------------------CCEEEECS
T ss_pred HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence 999999999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhHhccccccCHHHHHhhccCCCCcc
Q 017078 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVE 239 (377)
Q Consensus 160 ~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 239 (377)
++|+|+||++|+++.++...+++||++++++|.++|..+++++....+.+.++++|+++|+++.++..+.+.........
T Consensus 162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 99999999999999998999999999999999999999888887666778999999999999988877665443334456
Q ss_pred ceEEcCCCcEEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHH
Q 017078 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 240 ~~~~lpd~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL 319 (377)
..|.+|||+.+.++.+||+++|+||+|++++.+..+|.++|.++|.+||.++|+.+++||+||||+|++|||.+||++||
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhC-----------CCCceEEEECCCCCccceehhhHHhhcccccc-cccccHHHHhhcCCccccc
Q 017078 320 SALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWIAKAEYDESGPSIVHR 374 (377)
Q Consensus 320 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~~y~e~G~~~~~~ 374 (377)
..+. |...+++|..+++|.+++|+|||++|++.+|+ ++||||+||+|+|+++++|
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9987 77678899989999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-72 Score=568.96 Aligned_cols=370 Identities=21% Similarity=0.386 Sum_probs=294.3
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCcc----------------------------------------
Q 017078 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---------------------------------------- 46 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~---------------------------------------- 46 (377)
+++||||+||.++|+|||||+.|+ .+|+++++++.....
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 458999999999999999999997 569999997542110
Q ss_pred ---------------------------------ccCCCcceeecccccc--ccCcceeeccccCC-----------ccCC
Q 017078 47 ---------------------------------VGMGQKDAYVGDEAQS--KRGILTLKYPIEHG-----------IVSN 80 (377)
Q Consensus 47 ---------------------------------~~~~~~~~~vg~~~~~--~~~~~~~~~p~~~g-----------~i~~ 80 (377)
.....++++||++|+. .++.+.++||+++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0112356799999975 36778999999999 4678
Q ss_pred HHHHHHHHHHHhccccCCCCCC---CcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCceEEEEeC
Q 017078 81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS 157 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDi 157 (377)
|+++|++|+|+|++.|++++++ ||+||++|+++++..|+.+++++||.|+|+++++.++++||+|++|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCcc-----chhHHHHHHHHhHhccccccCHHHHHhh-
Q 017078 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFT-----TTAEREIVRDMKEKLAYIALDYEQELET- 231 (377)
Q Consensus 158 G~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~~~~- 231 (377)
|++.|+|+||+||+++.+++.++++||++++++|.++|..+++.+. ...++++++++|+++||++.++..+...
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 9999999999999999999999999999999999999999987654 3457889999999999998764321000
Q ss_pred ----------------------------------------------------------------------ccCCCCccce
Q 017078 232 ----------------------------------------------------------------------SKTSSAVEKS 241 (377)
Q Consensus 232 ----------------------------------------------------------------------~~~~~~~~~~ 241 (377)
..........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 0000112346
Q ss_pred EEcCCCcEEeeCCcccccccccCCCccC--------------------------------CCcCCCHHHHHHHHHhcCC-
Q 017078 242 YELPDGQVITIGAERFRCPEVLFQPSMI--------------------------------GMEAAGIHETTYNSIMKCD- 288 (377)
Q Consensus 242 ~~lpd~~~i~i~~~~~~~~E~lf~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~- 288 (377)
+.+|++..+.++.+|+.++|.||.|... +.+..+|+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 7788999999999999999999998532 1235689999999999998
Q ss_pred hhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCc-----eEEEECCC---CCccceehhhHHhhccccccccccc
Q 017078 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSM-----KIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIA 360 (377)
Q Consensus 289 ~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~-----~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it 360 (377)
.|+|+.|++|||||||+|++|||.+||++||+.+.|... +++|+.++ +|.+++|+||||+|+|++|+++|||
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt 573 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY 573 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence 699999999999999999999999999999999998643 58999886 8999999999999999999999999
Q ss_pred HHHHhhcCCcccccccC
Q 017078 361 KAEYDESGPSIVHRKCF 377 (377)
Q Consensus 361 r~~y~e~G~~~~~~k~~ 377 (377)
|+||+|+|++||++||.
T Consensus 574 k~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 574 QREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHTTHHHHHHCS
T ss_pred HHHHHhhCcHHHhhcCC
Confidence 99999999999999994
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=5.6e-71 Score=533.63 Aligned_cols=370 Identities=39% Similarity=0.689 Sum_probs=331.4
Q ss_pred CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCc--------cccCCCcceeeccccccccCcceeeccccCC
Q 017078 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76 (377)
Q Consensus 5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g 76 (377)
.+.++||||+||+++|+||++++.|+.++||+++++++... ..+....++++|+++...++ ..+++|+++|
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G 81 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG 81 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence 35689999999999999999999999999999999876421 22223346899999987764 7899999999
Q ss_pred ccCCHHHHHHHHHHHhccccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhc---------c
Q 017078 77 IVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA---------S 147 (377)
Q Consensus 77 ~i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~ 147 (377)
.+.||+.++.+|+|+|.+.|+++++++++++++|+.++..+|+.+.+++||.+++++++++++|+||+|+ .
T Consensus 82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 9999999999999999788999999999999999999999999999999999999999999999999998 5
Q ss_pred CCceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhHhccccccCHHH
Q 017078 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQ 227 (377)
Q Consensus 148 g~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~ 227 (377)
+. +|+|||+|+++|+|+||++|.++.++...+++||++++++|.++|.+++..+....+.+.++++|+++|++..++..
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 56 89999999999999999999999988899999999999999999998888776666788999999999999988877
Q ss_pred HHhhccC-CCCccceEEcCCCc-----EEeeCCcccccccccCCCccCCCcC-CCHHHHHHHHHhcCChhHHHHhhcCce
Q 017078 228 ELETSKT-SSAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGMEA-AGIHETTYNSIMKCDVDIRKDLYGNIV 300 (377)
Q Consensus 228 ~~~~~~~-~~~~~~~~~lpd~~-----~i~i~~~~~~~~E~lf~p~~~~~~~-~~l~~~I~~~i~~~~~~~~~~l~~nIv 300 (377)
++++... +......|.+||+. .+.++.+||.++|.||+|++.+.+. .+|.++|.++|.+||.++|+.+++|||
T Consensus 241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv 320 (418)
T 1k8k_A 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV 320 (418)
T ss_dssp HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence 6654321 12234689999998 8999999999999999999887764 799999999999999999999999999
Q ss_pred eccCCCCCCChHHHHHHHHHhhC----------------CCCceEEEECCCCCccceehhhHHhhcccccccccccHHHH
Q 017078 301 LSGGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364 (377)
Q Consensus 301 l~GG~s~i~g~~~rl~~eL~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y 364 (377)
||||+|++|||.+||++||.... |...++++..+++|.+++|+|||++|++.+|+++||||+||
T Consensus 321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey 400 (418)
T 1k8k_A 321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDY 400 (418)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHH
T ss_pred EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHH
Confidence 99999999999999999999875 55667899999999999999999999999999999999999
Q ss_pred hhcCCccccccc
Q 017078 365 DESGPSIVHRKC 376 (377)
Q Consensus 365 ~e~G~~~~~~k~ 376 (377)
+|+|+++++|||
T Consensus 401 ~e~G~~~~~~~~ 412 (418)
T 1k8k_A 401 EEIGPSICRHNP 412 (418)
T ss_dssp HHHCGGGGGCCC
T ss_pred hhhCHHHHhhhc
Confidence 999999999976
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=7.2e-60 Score=459.33 Aligned_cols=363 Identities=21% Similarity=0.414 Sum_probs=303.5
Q ss_pred CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCc--------------------------------------
Q 017078 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-------------------------------------- 45 (377)
Q Consensus 4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~-------------------------------------- 45 (377)
.++.++|||.+||.++|+|+|.|..|. .+|++++++.....
T Consensus 37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~ 115 (655)
T 4am6_A 37 NDPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYY 115 (655)
T ss_dssp CCGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999999999999999998 77999987542100
Q ss_pred -----------------------cccC----------CCcceeeccccccc-cCcceeeccccCCccC----C-------
Q 017078 46 -----------------------MVGM----------GQKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N------- 80 (377)
Q Consensus 46 -----------------------~~~~----------~~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~----~------- 80 (377)
.... ..++.+||++|... ++.+.+++|+++|.|. |
T Consensus 116 k~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~ 195 (655)
T 4am6_A 116 KRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAEL 195 (655)
T ss_dssp SCCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHH
T ss_pred CCCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCcccccccc
Confidence 0000 12477899999874 6788999999999998 8
Q ss_pred HHHHHHHHHHHhc-cccCCCCC---CCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccC-CceEEEE
Q 017078 81 WDDMEKIWHHTFY-NELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-RTTGIVL 155 (377)
Q Consensus 81 ~~~~~~~~~~~~~-~~L~~~~~---~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVV 155 (377)
|++++.+|+|+|. +.|+++++ ++|+||++|+++++..|+++++++||.|++++++++.++++|+|++| .++||||
T Consensus 196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV 275 (655)
T 4am6_A 196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV 275 (655)
T ss_dssp HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence 9999999999997 38999986 89999999999999999999999999999999999999999999999 6999999
Q ss_pred eCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCC-----CccchhHHHHHHHHhHhcccc-ccCHHHHH
Q 017078 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGY-----SFTTTAEREIVRDMKEKLAYI-ALDYEQEL 229 (377)
Q Consensus 156 DiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v-~~~~~~~~ 229 (377)
|+|++.|+|+||++|+++.+++.++++||++++++|.++|.++|+ ++....+.+++++||+++||| ..++. .
T Consensus 276 DiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~--~ 353 (655)
T 4am6_A 276 NIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA--V 353 (655)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC--S
T ss_pred cCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh--h
Confidence 999999999999999999999999999999999999999999987 456778899999999999999 44431 0
Q ss_pred hhccCCCCccceE--EcCCC----cEEeeCCcccccccccCCCccCC---------------------------------
Q 017078 230 ETSKTSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSMIG--------------------------------- 270 (377)
Q Consensus 230 ~~~~~~~~~~~~~--~lpd~----~~i~i~~~~~~~~E~lf~p~~~~--------------------------------- 270 (377)
+...| ..|++ ..+.++.|||++||+||.|++++
T Consensus 354 --------q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~ 425 (655)
T 4am6_A 354 --------QLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSL 425 (655)
T ss_dssp --------EEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCH
T ss_pred --------hhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccch
Confidence 11122 23443 36889999999999999987531
Q ss_pred ----------------------------------------------CcCCCHHHHHHHHHhc-C---ChhHHHHhhcCce
Q 017078 271 ----------------------------------------------MEAAGIHETTYNSIMK-C---DVDIRKDLYGNIV 300 (377)
Q Consensus 271 ----------------------------------------------~~~~~l~~~I~~~i~~-~---~~~~~~~l~~nIv 300 (377)
....+|.++|.++|.. | +....+.+++||+
T Consensus 426 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nil 505 (655)
T 4am6_A 426 SQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNIL 505 (655)
T ss_dssp HHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEE
T ss_pred hHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEE
Confidence 0024899999999973 3 3444459999999
Q ss_pred eccCCCCCCChHHHHHHHHHhhCC--------------------------------------------------------
Q 017078 301 LSGGSTMFPGIADRMSKEISALAP-------------------------------------------------------- 324 (377)
Q Consensus 301 l~GG~s~i~g~~~rl~~eL~~~~~-------------------------------------------------------- 324 (377)
||||+|++|||...|...+...-|
T Consensus 506 ivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 585 (655)
T 4am6_A 506 IVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQ 585 (655)
T ss_dssp EESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHH
T ss_pred EEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhh
Confidence 999999999998777655543111
Q ss_pred -----------CCceEEEECCCC---CccceehhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017078 325 -----------SSMKIKVVAPPE---RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377 (377)
Q Consensus 325 -----------~~~~v~v~~~~~---~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
.-.+|+|..+|. |.+++|+|||++|+++.|+++||||+||+|+|++++++||+
T Consensus 586 ~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 586 HQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred hhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 012478888885 48999999999999999999999999999999999999984
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.8e-36 Score=285.07 Aligned_cols=307 Identities=15% Similarity=0.211 Sum_probs=238.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCccccCCCcceeecccccccc----CcceeeccccCCccCCHHH
Q 017078 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~ 83 (377)
.+|+||+||+++++|+.++. |...+||+++.+++. .+..++|++|.... ....+.+|+++|.+.+|+.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~ 75 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV 75 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence 68999999999999998765 667789999876541 23457999987652 2345689999999999999
Q ss_pred HHHHHHHHhccccCCC-CCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCC-----ceEEEEeC
Q 017078 84 MEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDS 157 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~-~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi 157 (377)
.+++|.+++.+..... ....++++++|+.++..+|+.+.+. ++.+|++.+.++++|+||+++++. .+.+|||+
T Consensus 76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi 154 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI 154 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence 9999999984432322 4468899999999999999988885 599999999999999999999986 68999999
Q ss_pred CCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhc-CCCccchhHHHHHHHHhHhccccccCHHHHHhhccCCC
Q 017078 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTER-GYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSS 236 (377)
Q Consensus 158 G~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~ 236 (377)
|+++|+++++..|.++ .....++||+++++.|.+++.++ +..+ ..+.+|++|+++++...+...+
T Consensus 155 Gggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~-------- 220 (344)
T 1jce_A 155 GGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND-------- 220 (344)
T ss_dssp CSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH--------
T ss_pred CCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC--------
Confidence 9999999999999887 45788999999999999998754 2222 2467999999999875443211
Q ss_pred CccceEEc-----CCCc--EEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhh-cCceeccCCCCC
Q 017078 237 AVEKSYEL-----PDGQ--VITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTMF 308 (377)
Q Consensus 237 ~~~~~~~l-----pd~~--~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~-~nIvl~GG~s~i 308 (377)
...+.+ .+|. .+.++.+++. .+|+|. ...+.+.|.++|.+++.+.+..++ ++|+||||+|++
T Consensus 221 --~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~-----~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~ 290 (344)
T 1jce_A 221 --ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSV-----VVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLL 290 (344)
T ss_dssp --HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHH-----HHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCS
T ss_pred --cceEEEeccccCCCCceeEEEeHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCchhccchhhCcEEEECccccc
Confidence 112222 3554 3455544443 234432 123788889999999888888888 799999999999
Q ss_pred CChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc-ccccc
Q 017078 309 PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQ 355 (377)
Q Consensus 309 ~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~-l~~~~ 355 (377)
|||.++|++++.. + +..+++|.+++|.||++++. ++.|+
T Consensus 291 p~l~~~l~~~~~~------~--v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 291 RGLDTLLQKETGI------S--VIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp BTHHHHHHHHHSS------C--EEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred hHHHHHHHHHHCC------C--ccccCChHHHHHHHHHHHHhChHHHH
Confidence 9999999999942 2 33466889999999999997 35553
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.93 E-value=8.4e-27 Score=229.71 Aligned_cols=297 Identities=16% Similarity=0.209 Sum_probs=202.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEeeCCCCccccCCCcceeecccccccc-----Ccceeec---
Q 017078 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR-----GILTLKY--- 71 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~-----~~~~~~~--- 71 (377)
.+|.||+||+++++|++.+..|..+ +||+++.. +...++|++|.... ....+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5899999999999999987777655 78887762 23467888875431 1122232
Q ss_pred -ccc---CCccCCH-HHHHHHHHHHhc---cccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhh
Q 017078 72 -PIE---HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS 143 (377)
Q Consensus 72 -p~~---~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a 143 (377)
|++ +|...+. +....+++++.. +.++ .....+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||
T Consensus 73 ~p~~~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a~-~~AGl~~~~li~Ep~AA 149 (509)
T 2v7y_A 73 TDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDAG-RIAGLEVERIINEPTAA 149 (509)
T ss_dssp SCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHH
T ss_pred CCcEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEecCHHHH
Confidence 565 6643222 223344444321 1232 23468999999999999999888865 88999999999999999
Q ss_pred hhccCC-----ceEEEEeCCCCceEEEEee--CCee-cccceEEecccHHHHHHHHHHHHHhc-----CCCccchh----
Q 017078 144 LYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDHLMKILTER-----GYSFTTTA---- 206 (377)
Q Consensus 144 ~~~~g~-----~~~lVVDiG~~~t~i~pv~--~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~-----~~~~~~~~---- 206 (377)
++++|. .+.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++.++ +.++....
T Consensus 150 Alay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~ 229 (509)
T 2v7y_A 150 ALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQ 229 (509)
T ss_dssp HHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHH
T ss_pred HHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 999886 4799999999999999876 4533 33334567999999999999988653 44443211
Q ss_pred -HHHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcC------CC---cEEeeCCcccccccccCCCccCCCcCCCH
Q 017078 207 -EREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSMIGMEAAGI 276 (377)
Q Consensus 207 -~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp------d~---~~i~i~~~~~~~~E~lf~p~~~~~~~~~l 276 (377)
-...+|++|+.++... ...+.+| +| ..+.++.+.+. .+|.|- ...+
T Consensus 230 ~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~fe---~l~~~~-----~~~i 285 (509)
T 2v7y_A 230 RLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKFE---ELSAHL-----VERT 285 (509)
T ss_dssp HHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHHH---HHTHHH-----HHTT
T ss_pred HHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHHH---HHHHHH-----HHHH
Confidence 1355778888777532 1122222 22 12344444332 233331 1226
Q ss_pred HHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 277 ~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++|..+. +....+++|+||||+|++|++.++|++.+.. .+..+.+|..++|.||+++|..
T Consensus 286 ~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 286 MGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 777778887664 2345678999999999999999999998842 2345678999999999999864
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=3.1e-24 Score=194.87 Aligned_cols=244 Identities=16% Similarity=0.153 Sum_probs=179.5
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCccccCCCcceeeccccccccCcceeeccccCCccCCHHHHHH
Q 017078 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK 86 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~~ 86 (377)
...++||+||+++|+.+..++. . .++. + .....|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~-~-----~l~~-----------------~---------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG-I-----PVAG-----------------A---------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC-C-----EEEE-----------------E---------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC-c-----EEEE-----------------E---------eecccccCCCEEEcHHHHHH
Confidence 4579999999999998853221 1 1111 1 11236889999999999999
Q ss_pred HHHHHhccccCC-CCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCceEEEEeCCCCceEEE
Q 017078 87 IWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165 (377)
Q Consensus 87 ~~~~~~~~~L~~-~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~ 165 (377)
+|++++...... ......++++.|..+....|+ .++.+++.+|++...+..++.|++++++..+++|||+|+++|+++
T Consensus 76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~ 154 (272)
T 3h1q_A 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence 999997543322 223456778888777666665 455577999999999999999999999999999999999999999
Q ss_pred EeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcC
Q 017078 166 PIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELP 245 (377)
Q Consensus 166 pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp 245 (377)
++.+|.++ .....++||.++++.+.+.+. .+.+.++++|++++.. ++...
T Consensus 155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~~-----~~~~~-------------- 204 (272)
T 3h1q_A 155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSRH-----REIMR-------------- 204 (272)
T ss_dssp EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTTH-----HHHHH--------------
T ss_pred EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCCH-----HHHHH--------------
Confidence 99999988 457889999999999998873 1345688899887621 11100
Q ss_pred CCcEEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCC
Q 017078 246 DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS 325 (377)
Q Consensus 246 d~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~ 325 (377)
+.+.++. .+.+.|.+.+.+++ ..++|+|+||+|++|||.++|+++|..
T Consensus 205 -------------~~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~---- 252 (272)
T 3h1q_A 205 -------------VVRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK---- 252 (272)
T ss_dssp -------------HHHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS----
T ss_pred -------------HHHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC----
Confidence 0011111 15666677777665 235999999999999999999999832
Q ss_pred CceEEEECCCCCccceehhhHHhh
Q 017078 326 SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 326 ~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
++..+++|+++.|+||+++|
T Consensus 253 ----~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 ----EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp ----CCBCCSSGGGHHHHHHHTTC
T ss_pred ----CccccCChHHHHHHHHHhcC
Confidence 34456789999999999875
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.91 E-value=8e-25 Score=208.56 Aligned_cols=304 Identities=15% Similarity=0.168 Sum_probs=196.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEeeCCCCccccCCCcceeecccccccc-----C-ccee----
Q 017078 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR-----G-ILTL---- 69 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~-----~-~~~~---- 69 (377)
..|.||+||+++.+++..+..|..+ +||+++...+. ..++|.++.... . ...+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~---------~~~~G~~A~~~~~~~~~~~~~~~k~~l 73 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDG---------ETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTS---------CEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCC---------CEEECHHHHHhhhhCccceeehhHHhh
Confidence 5789999999999999865544433 67777664322 234555443210 0 0000
Q ss_pred --------------ecccc-------------CCccCC-HHHHHHHHHHHhc---cccCCCCCCCcEEEeeCCCCChHHH
Q 017078 70 --------------KYPIE-------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 70 --------------~~p~~-------------~g~i~~-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~ 118 (377)
.+|++ +|.... .+....+++++.. ..++. ....+++++|..++..+|
T Consensus 74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~--~~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR 151 (383)
T ss_dssp TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSS--CCCEEEECBCTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence 02322 232222 3344555555532 22332 345799999999999999
Q ss_pred HhhhhhcccccCCCeEEeecchhhhhhccCCc------eEEEEeCCCCceEEEEeeCC------eec-ccceEEecccHH
Q 017078 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YAL-PHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~i~pv~~g------~~~-~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|+||+++++.. +.+|+|+|+++|+++.+..+ ... .......++||.
T Consensus 152 ~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 230 (383)
T 1dkg_D 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (383)
T ss_dssp HHHHHHH-HHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred HHHHHHH-HHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence 9888875 889999999999999999988753 78999999999999988754 221 112345799999
Q ss_pred HHHHHHHHHHHhc-----CCCccchh-----HHHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcCCC-c--EEee
Q 017078 186 DLTDHLMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPDG-Q--VITI 252 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~-~--~i~i 252 (377)
++++.|.+++.++ +.++.... -.+.++++|++++..... . . ..+..+..++| . .+.+
T Consensus 231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~---~---i----~i~~~~~~~~G~~~~~~~i 300 (383)
T 1dkg_D 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT---D---V----NLPYITADATGPKHMNIKV 300 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE---E---E----EEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce---E---E----EEecccccCCCCeeEEEEE
Confidence 9999999988654 44443211 135688888888754210 0 0 00111223334 2 2344
Q ss_pred CCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEE
Q 017078 253 GAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~ 332 (377)
+.+++. .+|.|.. ..+.+.|.++|.++.. ....+++|+||||+|++|++.++|++++.. ++.
T Consensus 301 t~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~ 362 (383)
T 1dkg_D 301 TRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR 362 (383)
T ss_dssp EHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCB
T ss_pred eHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCC
Confidence 444432 2333311 2267777788877642 345568999999999999999999999842 244
Q ss_pred CCCCCccceehhhHHhhcc
Q 017078 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|.+++|.||+++|.+
T Consensus 363 ~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 363 KDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp CSSCTTTHHHHHHHHHTTT
T ss_pred CCcChHHHHHHHHHHHHHh
Confidence 5678999999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.90 E-value=3.5e-24 Score=204.87 Aligned_cols=299 Identities=17% Similarity=0.175 Sum_probs=186.8
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEeeCCCCccccCCCcceeeccccccc--cCc----ceeecc
Q 017078 7 IQPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RGI----LTLKYP 72 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~~----~~~~~p 72 (377)
..+|.||+||+++++++..+..|..+ +||+++... +..++|+++... ... ..+++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~----------~~~~vG~~A~~~~~~~~~~~~~~~k~~ 87 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD----------DERLIGDAAKNQVAANPQNTIFDIKRL 87 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECS----------SCEEESHHHHHTGGGCGGGEECCGGGT
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeC----------CcEEecHHHHHhhHhCcccCHHHHHHH
Confidence 46799999999999999987666533 266655432 245677766432 111 111111
Q ss_pred ccC--------------------------------C--c-cCCHHHHHHHHHHHh---ccccCCCCCCCcEEEeeCCCCC
Q 017078 73 IEH--------------------------------G--I-VSNWDDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNP 114 (377)
Q Consensus 73 ~~~--------------------------------g--~-i~~~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~~~~~~ 114 (377)
+.. | . +...+....+++++. ...++ .....+++++|..++
T Consensus 88 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 88 IGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFN 165 (394)
T ss_dssp TTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCC
T ss_pred hCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCC
Confidence 110 1 1 111233344444442 12333 234689999999999
Q ss_pred hHHHHhhhhhcccccCCCeEEeecchhhhhhccCCc------eEEEEeCCCCceEEEEee--CCee-cccceEEecccHH
Q 017078 115 KANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGR 185 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~i~pv~--~g~~-~~~~~~~~~~GG~ 185 (377)
..+|+.+.+.+ +.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++.. +.......++||.
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~ 244 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGE 244 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChH
Confidence 99999888777 889999999999999999998753 459999999999988775 3322 1222345799999
Q ss_pred HHHHHHHHHHHhc-----CCCccchhH-----HHHHHHHhHhccccccCHHHHHhhccCCCCccceEEc---CCCcEEe-
Q 017078 186 DLTDHLMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYEL---PDGQVIT- 251 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~l---pd~~~i~- 251 (377)
++++.+.+++.++ +.+...... ...++++|+.++... ...+.+ .++..+.
T Consensus 245 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~----------------~~~~~~~~~~~~~~~~~ 308 (394)
T 3qfu_A 245 DFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQM----------------STRIEIDSFVDGIDLSE 308 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCS----------------EEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCC----------------cEEEEEEeccCCceeEE
Confidence 9999999888532 222211100 133555555444211 112222 1333332
Q ss_pred -eCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEE
Q 017078 252 -IGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIK 330 (377)
Q Consensus 252 -i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~ 330 (377)
++.+.+ |-++.|- ...+.+.|.++|..+..+ ...+++|+||||+|++|++.++|++.+.. .+
T Consensus 309 ~i~r~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~ 371 (394)
T 3qfu_A 309 TLTRAKF---EELNLDL-----FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDG-------KK 371 (394)
T ss_dssp EEEHHHH---HHHHHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTT-------CC
T ss_pred EEEHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCC-------CC
Confidence 332222 1122220 112566677777665433 45668999999999999999999988732 23
Q ss_pred EECCCCCccceehhhHHhhcc
Q 017078 331 VVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 331 v~~~~~~~~~~w~Gasi~a~l 351 (377)
+..+.+|..++|.||+++|.+
T Consensus 372 v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 372 ASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CBCCSCTTTHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHh
Confidence 455678999999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.88 E-value=4e-23 Score=198.14 Aligned_cols=302 Identities=17% Similarity=0.176 Sum_probs=185.7
Q ss_pred CCCcEEEeCCCCceEEeeeCCCCCCC--------CCCceeEeeCCCCccccCCCcceeecccccccc--CcceeeccccC
Q 017078 6 DIQPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILTLKYPIEH 75 (377)
Q Consensus 6 ~~~~vviD~Gs~~~k~G~~~~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~~~p~~~ 75 (377)
.+.+|.||+||+++++++..+..|.. .+||+++.. ....++|.+|.... ......+.+++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~Kr 91 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT----------DTERLIGDAAKNQVAMNPTNTIFDAKR 91 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEEC----------SSCEEETHHHHHTTTTCSTTEECCGGG
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEEC----------CCCEEecHHHHHhhHhChhhhHHHHHH
Confidence 46789999999999999987665542 335555442 22456777764321 11111111211
Q ss_pred Cc---------------------------------------cCCHHHHHHHHHHHh---ccccCCCCCCCcEEEeeCCCC
Q 017078 76 GI---------------------------------------VSNWDDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLN 113 (377)
Q Consensus 76 g~---------------------------------------i~~~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~~~~~ 113 (377)
.. +...+....+++++. ...++. ....+++++|..+
T Consensus 92 ~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~--~~~~~vitvPa~~ 169 (404)
T 3i33_A 92 LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGG--KVHSAVITVPAYF 169 (404)
T ss_dssp TTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSS--CCCEEEEEECTTC
T ss_pred HhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhcc--CCCcEEEEECCCC
Confidence 11 111233344444442 123333 2457999999999
Q ss_pred ChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCc---------eEEEEeCCCCceEEEEee--CCee-cccceEEec
Q 017078 114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT---------TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLD 181 (377)
Q Consensus 114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------~~lVVDiG~~~t~i~pv~--~g~~-~~~~~~~~~ 181 (377)
+..+|+.+.+. ++.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++.. +.......+
T Consensus 170 ~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~ 248 (404)
T 3i33_A 170 NDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 248 (404)
T ss_dssp CHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred CHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCC
Confidence 99999988777 4889999999999999999988643 459999999999998874 4432 222344579
Q ss_pred ccHHHHHHHHHHHHHhc-----CCCccchhH-----HHHHHHHhHhccccccCHHHHHhhccCCCCccceEEc---CCCc
Q 017078 182 LAGRDLTDHLMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYEL---PDGQ 248 (377)
Q Consensus 182 ~GG~~i~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~l---pd~~ 248 (377)
+||.++++.+.+++.++ +..+..... ...+++.|+.++... ...+.+ .++.
T Consensus 249 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~----------------~~~~~~~~~~~g~ 312 (404)
T 3i33_A 249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSST----------------QASIEIDSLYEGV 312 (404)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSS----------------EEEEEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCc----------------ceEEEEeeccCCc
Confidence 99999999999888432 222221110 134555665544211 111211 1333
Q ss_pred EEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCce
Q 017078 249 VITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMK 328 (377)
Q Consensus 249 ~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~ 328 (377)
.+.+.-.|..+ |-++.|- ...+.+.|.++|..... ....++.|+||||+|++|++.++|++.+...
T Consensus 313 ~~~~~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~------ 378 (404)
T 3i33_A 313 DFYTSITRARF-EELNADL-----FRGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK------ 378 (404)
T ss_dssp EEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC------
T ss_pred eeEEEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHHHcCCC------
Confidence 33222222222 2222321 11255666666665432 2345688999999999999999999877321
Q ss_pred EEEECCCCCccceehhhHHhhcc
Q 017078 329 IKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 329 v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++..+.+|..+++.||+++|.+
T Consensus 379 -~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 379 -ELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp -CCBCSSCTTTHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHHHHHH
Confidence 3445678999999999999865
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.85 E-value=2.3e-21 Score=194.37 Aligned_cols=297 Identities=18% Similarity=0.213 Sum_probs=190.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCC--------CCCceeEeeCCCCccccCCCcceeeccccccc-----c-Ccceee---
Q 017078 8 QPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK-----R-GILTLK--- 70 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~-----~-~~~~~~--- 70 (377)
..|.||+||+++.+++..+..|.+ .+||+++...+ ...++|.+|... . ....++
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~t~~~~Kr~i 73 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTT---------SCEEESHHHHTTTTTCGGGEEECGGGTT
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECC---------CcEEECHHHHHHhhhCCCCEeehhhHhh
Confidence 589999999999999986554442 36777766332 224456554321 0 000011
Q ss_pred ---------------cccc-------------CCccCC-HHHHHHHHHHHhc---cccCCCCCCCcEEEeeCCCCChHHH
Q 017078 71 ---------------YPIE-------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 71 ---------------~p~~-------------~g~i~~-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~ 118 (377)
+|++ +|.... .+....+++++.. ..++. .-..+|+++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~--~v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCS--CCCEEEEEECTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC--CCcEEEEEECCCCCHHHH
Confidence 1322 232222 2334445555431 23432 235799999999999999
Q ss_pred HhhhhhcccccCCCeEEeecchhhhhhccCCc------eEEEEeCCCCceEEEEee------CCee-cccceEEecccHH
Q 017078 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIY------EGYA-LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~i~pv~------~g~~-~~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|+||++++|.. +.+|+|+|+++++|+.+. +|.. +.......++||.
T Consensus 152 ~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~ 230 (605)
T 2kho_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGG
T ss_pred HHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHH
Confidence 9888776 889999999999999999988743 589999999999999886 3432 2223345799999
Q ss_pred HHHHHHHHHHHhc-----CCCccchh-----HHHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcC------CC-c
Q 017078 186 DLTDHLMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELP------DG-Q 248 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp------d~-~ 248 (377)
++++.|.+++.++ +.++.... -...+|.+|+.++... ...+.+| +| .
T Consensus 231 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~ 294 (605)
T 2kho_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYITADATGPK 294 (605)
T ss_dssp GTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEecccccCCCCce
Confidence 9999999888653 44432211 1245677777766421 1112221 22 1
Q ss_pred E--EeeCCcccc-cccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCC
Q 017078 249 V--ITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS 325 (377)
Q Consensus 249 ~--i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~ 325 (377)
. +.++.+.+. +.+.++.. +.+.|.++|..... ....++.|+||||+|++|++.+++++.+..
T Consensus 295 ~~~~~itr~~fe~l~~~~~~~---------i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~---- 359 (605)
T 2kho_A 295 HMNIKVTRAKLESLVEDLVNR---------SIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK---- 359 (605)
T ss_dssp EEEEEEEHHHHHTTCCSTTGG---------GTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS----
T ss_pred EEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC----
Confidence 1 233333332 22333332 67778888876642 234568999999999999999999988832
Q ss_pred CceEEEECCCCCccceehhhHHhhcc
Q 017078 326 SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 326 ~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+..+.+|..+++.||+++|..
T Consensus 360 ----~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 360 ----EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp ----CCBCSSCTTTHHHHHHHHHHTT
T ss_pred ----CcCcCCCcchHHHHHHHHHHHH
Confidence 2345668899999999999864
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.84 E-value=1.1e-20 Score=187.77 Aligned_cols=232 Identities=16% Similarity=0.186 Sum_probs=154.8
Q ss_pred HHHHHHHHHHh---ccccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCC-------ce
Q 017078 82 DDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-------TT 151 (377)
Q Consensus 82 ~~~~~~~~~~~---~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~ 151 (377)
+....+++++. ...|+.. -..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||+++++. .+
T Consensus 118 ei~a~~L~~lk~~ae~~lg~~--v~~~VitVPa~f~~~qr~a~~~A~-~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~ 194 (554)
T 1yuw_A 118 EVSSMVLTKMKEIAEAYLGKT--VTNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKVGAERN 194 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHSSC--CCEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCC--CCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcE
Confidence 34445555543 1234322 357999999999999999888755 88999999999999999998874 46
Q ss_pred EEEEeCCCCceEEEEee--CCee-cccceEEecccHHHHHHHHHHHHHh-----cCCCccchh-----HHHHHHHHhHhc
Q 017078 152 GIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDHLMKILTE-----RGYSFTTTA-----EREIVRDMKEKL 218 (377)
Q Consensus 152 ~lVVDiG~~~t~i~pv~--~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~ 218 (377)
.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++.. .+.++.... -...+|++|+.+
T Consensus 195 vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~l 274 (554)
T 1yuw_A 195 VLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274 (554)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhc
Confidence 89999999999999887 6754 3334456799999999999988853 233332211 124567777776
Q ss_pred cccccCHHHHHhhccCCCCccceEEcC---CCcE--EeeCCcccc-cccccCCCccCCCcCCCHHHHHHHHHhcCChhHH
Q 017078 219 AYIALDYEQELETSKTSSAVEKSYELP---DGQV--ITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIR 292 (377)
Q Consensus 219 ~~v~~~~~~~~~~~~~~~~~~~~~~lp---d~~~--i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~ 292 (377)
+... ...+.++ +|.. +.++.+.+. ..+.++.. +.+.|.++|.... +.
T Consensus 275 s~~~----------------~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~---------i~~~i~~~L~~a~--~~ 327 (554)
T 1yuw_A 275 SSST----------------QASIEIDSLYEGIDFYTSITRARFEELNADLFRG---------TLDPVEKALRDAK--LD 327 (554)
T ss_dssp TTSS----------------EEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHH---------TTHHHHHHHHHTT--CC
T ss_pred ccCc----------------eEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CC
Confidence 5421 1122222 2322 223333221 11222222 4455666666542 22
Q ss_pred HHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc
Q 017078 293 KDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 293 ~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
...++.|+||||+|++|++.++|++.+... ++..+.+|..+++.||+++|.
T Consensus 328 ~~~i~~VvLvGG~srip~v~~~l~~~f~~~-------~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 328 KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCCSCTTTHHHHHHHHHHH
T ss_pred hhhCcEEEEECCcccChHHHHHHHHHcCCC-------ccccCCCchhHHHHHHHHHHH
Confidence 345689999999999999999998877422 334566889999999999986
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.83 E-value=1.1e-20 Score=191.02 Aligned_cols=232 Identities=9% Similarity=0.149 Sum_probs=155.0
Q ss_pred HHHHHHHHHHhc---cccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCC---------
Q 017078 82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR--------- 149 (377)
Q Consensus 82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~--------- 149 (377)
+....+++++.. ..++. .-..+|+++|..++..+|+.+.+.+ +.+|++.+.++++|+||++++|.
T Consensus 117 ei~a~~L~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~ 193 (675)
T 3d2f_A 117 QLAAMFIDKVKDTVKQDTKA--NITDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGE 193 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHCS--CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhcccccccc
Confidence 344455555431 23442 2357999999999999999888866 88999999999999999987742
Q ss_pred ---ceEEEEeCCCCceEEEEee--CCee-cccceEEecccHHHHHHHHHHHHHh-----cCCCccchhH-----HHHHHH
Q 017078 150 ---TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDHLMKILTE-----RGYSFTTTAE-----REIVRD 213 (377)
Q Consensus 150 ---~~~lVVDiG~~~t~i~pv~--~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~-----~~~~~~~~~~-----~~~~~~ 213 (377)
.+.+|+|+|+++++|+.+. +|.. +.......++||.++++.|.+++.. .+.++..... ...++.
T Consensus 194 ~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~ 273 (675)
T 3d2f_A 194 EKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEK 273 (675)
T ss_dssp SCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 4689999999999999886 6654 3333446799999999999998853 2333321111 245677
Q ss_pred HhHhccccccCHHHHHhhccCCCCccceEEcC---CCc--EEeeCCcccc-cccccCCCccCCCcCCCHHHHHHHHHhcC
Q 017078 214 MKEKLAYIALDYEQELETSKTSSAVEKSYELP---DGQ--VITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKC 287 (377)
Q Consensus 214 ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp---d~~--~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~ 287 (377)
+|+.++... ...+.++ ++. .+.++.+.|. +.+.++.. +.+.|.++|...
T Consensus 274 aK~~Ls~~~----------------~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~---------i~~~i~~~L~~a 328 (675)
T 3d2f_A 274 LKKVLSANT----------------NAPFSVESVMNDVDVSSQLSREELEELVKPLLER---------VTEPVTKALAQA 328 (675)
T ss_dssp HHHHHHHCS----------------EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT---------TTHHHHHHHHHH
T ss_pred HHHhcCcCC----------------ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHh
Confidence 777665321 1112221 122 2333333332 22233332 666677777654
Q ss_pred ChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 288 ~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.. ...-++.|+||||+|++|++.++|++.+.. .+..+.+|..+++.||+++|..
T Consensus 329 ~l--~~~~I~~VvLvGGssriP~v~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 329 KL--SAEEVDFVEIIGGTTRIPTLKQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp TC--CGGGCCEEEEESGGGGSHHHHHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred CC--ChhhCcEEEEECCCccChHHHHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence 21 123457899999999999999999988831 2445678999999999999863
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.82 E-value=1.1e-20 Score=181.53 Aligned_cols=238 Identities=13% Similarity=0.152 Sum_probs=150.0
Q ss_pred HHHHHHHHHHhc---cccCCCCCCCcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccCCc--------
Q 017078 82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT-------- 150 (377)
Q Consensus 82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~-------- 150 (377)
+....+++++.. ..++ .....++++.|..++..+|+.+.+.+ +..|++.+.++++|.||+++++..
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~ 205 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDK 205 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence 344555555532 2333 23467999999999999999877776 889999999999999999998764
Q ss_pred eEEEEeCCCCceEEEEe--eCCee-cccceEEecccHHHHHHHHHHHHHhc-----C--CCccchhH-----HHHHHHHh
Q 017078 151 TGIVLDSGDGVSHTVPI--YEGYA-LPHAILRLDLAGRDLTDHLMKILTER-----G--YSFTTTAE-----REIVRDMK 215 (377)
Q Consensus 151 ~~lVVDiG~~~t~i~pv--~~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~-----~--~~~~~~~~-----~~~~~~ik 215 (377)
+.+|+|+|+++|+++.+ .+|.. +.......++||.++++.|.+++..+ + .+...... ...++.+|
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 285 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK 285 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence 58999999999999875 33322 12222357999999999999888643 1 11111000 12355566
Q ss_pred HhccccccCHHHHHhhccCCCCccceEEc---CCCcEEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHH
Q 017078 216 EKLAYIALDYEQELETSKTSSAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIR 292 (377)
Q Consensus 216 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l---pd~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~ 292 (377)
+.++... ...+.+ .++....+.-.|..+ |-++.|- ...+.+.|.+.|.... ..
T Consensus 286 ~~ls~~~----------------~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~-----~~~i~~~i~~~l~~~~--~~ 341 (409)
T 4gni_A 286 RALSRST----------------NASFSVESLIDGLDFASTINRLRY-ETIARTV-----FEGFNRLVESAVKKAG--LD 341 (409)
T ss_dssp HHHHHSS----------------EEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHHHHHHHHHHHHTT--CC
T ss_pred HhCCCCC----------------ceEEEeecccCCcceEEEeeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CC
Confidence 5543210 111221 123322222122222 2223331 1125555556665442 22
Q ss_pred HHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEE------ECCCCCccceehhhHHhhccc
Q 017078 293 KDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKV------VAPPERKYSVWIGGSILASLS 352 (377)
Q Consensus 293 ~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~ 352 (377)
...++.|+||||+|++|++.++|++.+.. .+++ ....+|..++..||+++|...
T Consensus 342 ~~~i~~V~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 342 PLDVDEVIMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHCCEEEEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 34568899999999999999999877632 2355 344689999999999998763
No 18
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.77 E-value=2.8e-19 Score=179.19 Aligned_cols=301 Identities=17% Similarity=0.188 Sum_probs=180.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEeeCCCCccccCCCcceeeccccccc------cCcceeeccc
Q 017078 8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI 73 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~ 73 (377)
.+|.||+||+++.+++..+..|. ..+||+++..++ ...++|.+|... .....+++-+
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Krll 73 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GCTLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTT---------SCEEESHHHHHTTTTCGGGEECCGGGTT
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCC---------CcEEecHHHHHHHHhCCCcEehhhHHhh
Confidence 57999999999999997544333 345777766432 234566555322 0011111111
Q ss_pred c-------------------------------CCc-cCCHHHHHHHHHHHh---ccccCCCCCCCcEEEeeCCCCChHHH
Q 017078 74 E-------------------------------HGI-VSNWDDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 74 ~-------------------------------~g~-i~~~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~~~~~~~~~~ 118 (377)
. .|. ....+....+++++. ...|+.. -..+|+++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~--v~~~VITVPa~f~~~qr 151 (605)
T 4b9q_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEP--VTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSC--CCEEEEEECTTCCHHHH
T ss_pred CCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCC--CCeEEEEECCCCCHHHH
Confidence 0 111 222344445555543 1344432 45799999999999999
Q ss_pred HhhhhhcccccCCCeEEeecchhhhhhccCC------ceEEEEeCCCCceEEEEeeCCe----e---cccceEEecccHH
Q 017078 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY----A---LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~pv~~g~----~---~~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|.||++++|. .+.+|+|+|+++++++.+.-+. . +.......++||.
T Consensus 152 ~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~ 230 (605)
T 4b9q_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHH
T ss_pred HHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChH
Confidence 8777766 88999999999999999998864 4679999999999999876433 1 1223335689999
Q ss_pred HHHHHHHHHHHhc-----CCCccchhH-----HHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcCC--C-cE--E
Q 017078 186 DLTDHLMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPD--G-QV--I 250 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd--~-~~--i 250 (377)
++++.+.+++..+ +.+...... ...++..|+.++..... .....+...+ | .. +
T Consensus 231 d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~------------~i~~~~~~~~~~g~~~~~~ 298 (605)
T 4b9q_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT------------DVNLPYITADATGPKHMNI 298 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEE------------EEEEEEEEECSSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCe------------EEEEeeeccCCCCCeeEEE
Confidence 9999999888642 333221111 23456666655532100 0001111111 1 11 2
Q ss_pred eeCCcccc-cccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceE
Q 017078 251 TIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKI 329 (377)
Q Consensus 251 ~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v 329 (377)
.++...+. +.+.++.. +.+.|.+++.... ....-++.|+||||+|++|++.+++++.+..
T Consensus 299 ~itr~~~e~l~~~~~~~---------i~~~v~~~L~~a~--~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~-------- 359 (605)
T 4b9q_A 299 KVTRAKLESLVEDLVNR---------SIEPLKVALQDAG--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK-------- 359 (605)
T ss_dssp EEEHHHHHHHHHHHHHH---------TTHHHHHHHHHTT--CCGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------
T ss_pred EEeHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CCHHHCcEEEEeCCccCchHHHHHHHHHhcc--------
Confidence 22222221 11222221 3444455554432 1223457899999999999999999988832
Q ss_pred EEECCCCCccceehhhHHhhcc
Q 017078 330 KVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 330 ~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+....+|..++..||+++|..
T Consensus 360 ~~~~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 360 EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp CCCSSSCTTTHHHHHHHHHHHH
T ss_pred CcCCCcChhHHHHHhHHHHHHH
Confidence 2334568899999999999864
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.75 E-value=7.8e-18 Score=159.80 Aligned_cols=171 Identities=16% Similarity=0.234 Sum_probs=108.9
Q ss_pred HhhhhhcccccCCCeEEeecchhhhhhccC-------CceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHH
Q 017078 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l 191 (377)
+.+.+.+ +.+|++...+..+|+|++.+++ ..+.+|||+|+++|+++.+.+|.++ .....++||.++++.+
T Consensus 154 ~~~~~~~-~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~~i 230 (377)
T 2ych_A 154 AGVLEAL-RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTEAI 230 (377)
T ss_dssp HHHHHHH-HHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHHH
T ss_pred HHHHHHH-HHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHHHH
Confidence 4444444 8899999999999999998874 2457999999999999999999987 5678999999999999
Q ss_pred HHHHHhcCCCccchhHHHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcCCCcEEeeCCcccccccccCCCccCCC
Q 017078 192 MKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGM 271 (377)
Q Consensus 192 ~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~~~~~~E~lf~p~~~~~ 271 (377)
.+.+ +. +.+.++++|.++++......++ ...+.+++ ..+.++.+. +.|++ .|
T Consensus 231 ~~~~---~~------~~~~aE~~K~~~~~~~~~~~~~----------~~~i~~~~-~~~~i~~~~--~~~~i-~~----- 282 (377)
T 2ych_A 231 ARSF---NL------DLLAAEEVKRTYGMATLPTEDE----------ELLLDFDA-ERERYSPGR--IYDAI-RP----- 282 (377)
T ss_dssp HHHT---TC------CHHHHHHHHHHTC------------------------------------C--HHHHH-HH-----
T ss_pred HHHh---CC------CHHHHHHHHhhccccccccccc----------cccccccc-ccccCCHHH--HHHHH-HH-----
Confidence 8743 22 2456899999988754321110 00111221 112222211 11111 11
Q ss_pred cCCCHHHHHHHHHhcCChhHHHHhhcCceeccCCCCCCChHHHHHHHHH
Q 017078 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS 320 (377)
Q Consensus 272 ~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~ 320 (377)
....+.+.|.++|..++...+....++|+||||+|++||+.+++++.+.
T Consensus 283 ~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 283 VLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 0112555666666655444556678899999999999999999999994
No 20
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.72 E-value=7.7e-18 Score=157.65 Aligned_cols=179 Identities=14% Similarity=0.118 Sum_probs=127.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCcccc------C--------CCcceeeccccccccCcceeeccc
Q 017078 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG------M--------GQKDAYVGDEAQSKRGILTLKYPI 73 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~------~--------~~~~~~vg~~~~~~~~~~~~~~p~ 73 (377)
..+.||+|+.++|+-. ++ .-.+.+||.++.........+ . .+..+.||++|. +|+
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l 90 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQ 90 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCS
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------ccc
Confidence 4589999999999864 33 234578998887654321100 0 134566777653 889
Q ss_pred cCCccCCHHHHHHHHHHHhcccc-CCCCCCCcEE--EeeCCCCChHHHHhhhhhcccc-------------cCCCeEEee
Q 017078 74 EHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVL--LTEAPLNPKANREKMTQIMFET-------------FNAPAMYVA 137 (377)
Q Consensus 74 ~~g~i~~~~~~~~~~~~~~~~~L-~~~~~~~~vv--l~~~~~~~~~~~~~l~~~lfe~-------------~~~~~v~~~ 137 (377)
+++.+.+ +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +++..+.++
T Consensus 91 ~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 9999988 666777767664432 1112335689 9999988888888887775432 235779999
Q ss_pred cchhhhhhcc--C-----C-ceEEEEeCCCCceEEEEee--CCeecccceEEecccHHHHHHHHHHHHHhc
Q 017078 138 IQAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EGYALPHAILRLDLAGRDLTDHLMKILTER 198 (377)
Q Consensus 138 ~~~~~a~~~~--g-----~-~~~lVVDiG~~~t~i~pv~--~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~ 198 (377)
++|++|++++ + . .+.+|||||+++|+++.+. +|.++.......++||+++++.+.+.++++
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999999974 2 1 4569999999999999998 887766556889999999999998877543
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.68 E-value=3.1e-16 Score=150.03 Aligned_cols=199 Identities=11% Similarity=0.135 Sum_probs=131.9
Q ss_pred hHHHHhhhhhcccccCCCeEEeecchhhhhhccCC-----ceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHH
Q 017078 115 KANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~ 189 (377)
+...+.+.+++ +..|+....++.+|+||++++.. .+.+|||+|+++|+++.+.+|.++ .....++||+++|+
T Consensus 167 ~~~v~n~~~~~-~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it~ 243 (419)
T 4a2a_A 167 LKVYEMFYNFL-QDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVIK 243 (419)
T ss_dssp HHHHHHHHHHH-HTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHHH
Confidence 34445555555 88999999999999999998765 368999999999999999999988 56789999999999
Q ss_pred HHHHHHHhcCCCccchhHHHHHHHHhHhccccccCHHHHHhhccCCCCccceEEcCC--C-cEEeeCCccc-ccccccCC
Q 017078 190 HLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPD--G-QVITIGAERF-RCPEVLFQ 265 (377)
Q Consensus 190 ~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd--~-~~i~i~~~~~-~~~E~lf~ 265 (377)
.+.+.+. ...+.+|++|.+++...... .....+.+|. + ....++...+ .+.+..+.
T Consensus 244 dIa~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~ve 303 (419)
T 4a2a_A 244 DVSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR 303 (419)
T ss_dssp HHHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHHH
Confidence 9998763 13467999999987643211 0112232222 1 1122221111 11112211
Q ss_pred CccCCCcCCCHHHHHHHHHhcCCh---h-HHHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEEC-----C--
Q 017078 266 PSMIGMEAAGIHETTYNSIMKCDV---D-IRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA-----P-- 334 (377)
Q Consensus 266 p~~~~~~~~~l~~~I~~~i~~~~~---~-~~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~-----~-- 334 (377)
.+.+.|.+.|+.... + ......+.|+||||+|++||+.+.+++.+. .++++.. |
T Consensus 304 ---------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g------~~vri~~~~~~~p~~ 368 (419)
T 4a2a_A 304 ---------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK------SPVRTGCYANSDRPS 368 (419)
T ss_dssp ---------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT------SCEEECCGGGSSSCC
T ss_pred ---------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC------CCeEEEecCCCCchh
Confidence 155556666665432 1 135677889999999999999999999983 3566655 3
Q ss_pred --------CCCccceehhhHHhhcc
Q 017078 335 --------PERKYSVWIGGSILASL 351 (377)
Q Consensus 335 --------~~~~~~~w~Gasi~a~l 351 (377)
.+|.|++-.|-.+++..
T Consensus 369 ~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 369 IINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CBTCHHHHTCGGGHHHHHTTCC---
T ss_pred ccCcccccCCchHHHHHHHHHHHhh
Confidence 36888888888777654
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.57 E-value=8.3e-15 Score=135.74 Aligned_cols=288 Identities=11% Similarity=0.094 Sum_probs=153.8
Q ss_pred cEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCcccc--------CCCcceeeccccccccCcceeeccccCCccCC
Q 017078 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG--------MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~--------~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~ 80 (377)
.+.||+|++++|+.+..++.....+|+............+ .++..+.+|..+.. .......+....
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~g~~y~vg~~a~~------~~~t~~~~~~~~ 75 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPD------AVVTTNIAWQYS 75 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEEEEECCEESSCCCCSSSCCCCEEEETTEEEEECTTCBS------CCCSCCSGGGGS
T ss_pred eEEEecCCccceEEEecCCCEEEEEecCceeecccccccCCCceeEEEECCEEEEEcccccc------cccCcCCCccch
Confidence 5799999999999885544433344432211111110001 12233445544321 111222222223
Q ss_pred HHHHHHHHHHHhccccCCCCCCCcEEEeeCCC-CCh-----------HHHHhhhhhc----ccccCCCeEEeecchhhhh
Q 017078 81 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL-NPK-----------ANREKMTQIM----FETFNAPAMYVAIQAVLSL 144 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~-~~~-----------~~~~~l~~~l----fe~~~~~~v~~~~~~~~a~ 144 (377)
...+..+. +.+. ..+..+.+..+++..|.. +.. ..++.+++.+ .+.+++..+.++++|++|+
T Consensus 76 ~~~l~~i~-~aL~-~~~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~ 153 (320)
T 2zgy_A 76 DVNVVAVH-HALL-TSGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAG 153 (320)
T ss_dssp HHHHHHHH-HHHH-HHSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHH
T ss_pred HHHHHHHH-HHHH-HcCCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHH
Confidence 33333333 2321 223333334578888854 221 1222223333 3566778999999999999
Q ss_pred hccC-----CceEEEEeCCCCceEEEEeeCCee-cccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHHHH-hHh
Q 017078 145 YASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDM-KEK 217 (377)
Q Consensus 145 ~~~g-----~~~~lVVDiG~~~t~i~pv~~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~i-k~~ 217 (377)
++++ ..+.+|||||+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++.++ ....++++ |.+
T Consensus 154 ~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i----~~~~ae~~lk~~ 229 (320)
T 2zgy_A 154 YEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKG----SSYLADDIIIHR 229 (320)
T ss_dssp HHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGG----GHHHHHHHHHTT
T ss_pred HhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCCCC----CHHHHHHHHHHh
Confidence 8763 357899999999999999999876 433456789999999999999986543322 23456666 554
Q ss_pred ccccccCHHHHHhhccCCCCccceEEcCCCcEEeeCCcccccccccCCCccCCCcCCCHHHHHHHHHhcCChhHHHHhhc
Q 017078 218 LAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG 297 (377)
Q Consensus 218 ~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~ 297 (377)
.... +... ... +|. ......+.+ .+ ....+.+.|.+.+++. ...+
T Consensus 230 ~~~~---~~~~--~i~----------~~~--------~~~~~~~~i-~~-----~~~~~~~~i~~~i~~~------~~~~ 274 (320)
T 2zgy_A 230 KDNN---YLKQ--RIN----------DEN--------KISIVTEAM-NE-----ALRKLEQRVLNTLNEF------SGYT 274 (320)
T ss_dssp TCHH---HHHH--HSS----------SSC--------THHHHHHHH-HH-----HHHHHHHHHHHHHTTC------CCCC
T ss_pred hhhh---cccc--eec----------Cch--------hhHHHHHHH-HH-----HHHHHHHHHHHHHHhh------cCCC
Confidence 2110 0000 000 000 000000000 00 0001333344444432 2346
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+||||+|.+ +.+.++ +.++... -++..+++|+++..+|+.++++
T Consensus 275 ~vvl~GGga~l--l~~~l~----~~~~~~~-~~~~~~~~P~~a~A~G~~~~~~ 320 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAVK----KHTQIRD-ERFFKTNNSQYDLVNGMYLIGN 320 (320)
T ss_dssp EEEEESTTHHH--HHHHHH----HTSCCCG-GGEECCSCGGGHHHHHHHHHHC
T ss_pred eEEEECChHHH--HHHHHH----HHhCCCC-CceeeCCCcHHHHHHHHHHhcC
Confidence 89999999987 544444 4443210 0245577899999999998864
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.47 E-value=2.8e-14 Score=132.41 Aligned_cols=185 Identities=12% Similarity=0.045 Sum_probs=115.6
Q ss_pred CCCCCCcEEEeCCCCceEEeee--C---CCCCCCCCCceeEeeCCCC-------ccccCCCcceeeccccccccCcceee
Q 017078 3 DGEDIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHTG-------VMVGMGQKDAYVGDEAQSKRGILTLK 70 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~--~---~~~P~~~~ps~~~~~~~~~-------~~~~~~~~~~~vg~~~~~~~~~~~~~ 70 (377)
.+++...|.||+|-.++|+-.. + ++.-+..|||.++...+.. .....++..+++|+.+...
T Consensus 3 ~~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~------- 75 (329)
T 4apw_A 3 NITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED------- 75 (329)
T ss_dssp --CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC-------
T ss_pred CccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc-------
Confidence 3445567899999999998653 2 1223457888877544321 1123456677888765321
Q ss_pred ccccCCccCCHHHHHHHHHHHhccccCCC-CCCCcEEEeeCCCCCh--HHHHhhhhhccc-------------ccCCCeE
Q 017078 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPK--ANREKMTQIMFE-------------TFNAPAM 134 (377)
Q Consensus 71 ~p~~~g~i~~~~~~~~~~~~~~~~~L~~~-~~~~~vvl~~~~~~~~--~~~~~l~~~lfe-------------~~~~~~v 134 (377)
-+.... +-+....++..++-..+... ..+-.+++..|...-. .+|+.+.+.+-. .+.+..|
T Consensus 76 -~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v 152 (329)
T 4apw_A 76 -SSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDI 152 (329)
T ss_dssp -SGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEE
T ss_pred -cccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEE
Confidence 111112 11234444444442334322 1223456666644322 234444444432 1224678
Q ss_pred EeecchhhhhhccC----CceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHh
Q 017078 135 YVAIQAVLSLYASG----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTE 197 (377)
Q Consensus 135 ~~~~~~~~a~~~~g----~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~ 197 (377)
.+.|++.+|.+... ..+.+|||||+++|+++.+.+|.++......+++||.++++.+.+.+..
T Consensus 153 ~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 153 TIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 99999999998762 3578999999999999999999998776778999999999999988765
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.40 E-value=3.8e-13 Score=125.87 Aligned_cols=186 Identities=13% Similarity=0.163 Sum_probs=117.7
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEeeCCCCc---------------cccCCCcc-eeeccccccccCcceee
Q 017078 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLK 70 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~---------------~~~~~~~~-~~vg~~~~~~~~~~~~~ 70 (377)
+-.|.||+|-.++|+ ..++ -.+.|||.++...+... ....++.. +++|+.|...... ..
T Consensus 4 ~~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~ 78 (355)
T 3js6_A 4 VYVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GK 78 (355)
T ss_dssp EEEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CE
T ss_pred cEEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--cc
Confidence 346899999999996 4444 34678998876433211 11123445 7889877542111 12
Q ss_pred ccc-cCCccCCHHHHHHHHHHHhc---cccCCCCCCCcEEEeeCCCCChHHH-Hhhhhhcccc-----------cCCCeE
Q 017078 71 YPI-EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR-EKMTQIMFET-----------FNAPAM 134 (377)
Q Consensus 71 ~p~-~~g~i~~~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~-~~l~~~lfe~-----------~~~~~v 134 (377)
+.+ ...+..+-+ ...++...+. ..+..+..+-.+++..|......++ +.+.+.+... +.+..|
T Consensus 79 ~~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V 157 (355)
T 3js6_A 79 DTASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGV 157 (355)
T ss_dssp ECCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEE
T ss_pred cccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEE
Confidence 222 233443322 2222222221 1121111123577778877655555 4566665422 223689
Q ss_pred EeecchhhhhhccC-----------CceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhc
Q 017078 135 YVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTER 198 (377)
Q Consensus 135 ~~~~~~~~a~~~~g-----------~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~ 198 (377)
.++++|.+|+++++ ..+.+|||||+.+|+++.+.+|.++.....++++||..+++.+.+.+.++
T Consensus 158 ~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 158 KIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999875 35689999999999999999999988777889999999999999998754
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.93 E-value=1.4e-09 Score=103.66 Aligned_cols=177 Identities=14% Similarity=0.158 Sum_probs=107.4
Q ss_pred cchhhhhhccCC-----ceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHH
Q 017078 138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
-+|.||.+++-. ...++||+|+++|+++.+.+|..+ +...+++||+++|..+..-|. ..+...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lg--------t~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELG--------LEDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHT--------CCCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence 677887776632 468999999999999999999888 778899999999999998883 22367899
Q ss_pred HHhHhccccccCH----HHHHhhccCCCCccceEEc--CCCcEEeeCCccccccc-ccCCCc-cCCCcCCC--HHH--HH
Q 017078 213 DMKEKLAYIALDY----EQELETSKTSSAVEKSYEL--PDGQVITIGAERFRCPE-VLFQPS-MIGMEAAG--IHE--TT 280 (377)
Q Consensus 213 ~ik~~~~~v~~~~----~~~~~~~~~~~~~~~~~~l--pd~~~i~i~~~~~~~~E-~lf~p~-~~~~~~~~--l~~--~I 280 (377)
++|. ++....+. .++ ...+++ |.- ++. .++. .+..|+ +... .+. +.+ ++
T Consensus 460 rIK~-YG~A~ve~lf~~~de----------de~Iev~~~~l-----gp~--~~~Rv~~~~~~~L~~I-~pR~~vEElelV 520 (610)
T 2d0o_A 460 EIKK-YPLAKVESLFHLRHE----------DGSVQFFSTPL-----PPA--VFARVCVVKADELVPL-PGDLALEKVRAI 520 (610)
T ss_dssp HHHH-SCEEEECSSSEEEET----------TSCEEECSSCC-----CGG--GTTCEEEECSSCEEEC-CTTCCHHHHHHH
T ss_pred Hhcc-cCceeecccccccCC----------CCeEEEecCCC-----Ccc--eeeeeecccccceeee-CCCcchHHHHHH
Confidence 9999 88765432 111 111111 000 000 0001 000001 0011 122 444 22
Q ss_pred HHHHhcC---ChhHHH-----Hh-----hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECC-----CCCcccee
Q 017078 281 YNSIMKC---DVDIRK-----DL-----YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP-----PERKYSVW 342 (377)
Q Consensus 281 ~~~i~~~---~~~~~~-----~l-----~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w 342 (377)
.+.+++. ...+|+ .+ +..||||||+|+++|+.+-.++.|..+ .|++-.| ..|.|++.
T Consensus 521 R~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y-----~VRiGrP~~~gv~gP~fAtA 595 (610)
T 2d0o_A 521 RRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY-----RLVAGRGNIRGSEGPRNAVA 595 (610)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS-----SCEEEECCGGGTSTTSCHHH
T ss_pred HHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCCcHHHH
Confidence 2331110 011111 11 256999999999999999999888662 4555444 36888888
Q ss_pred hhhHHh
Q 017078 343 IGGSIL 348 (377)
Q Consensus 343 ~Gasi~ 348 (377)
.|=.+|
T Consensus 596 vGLlly 601 (610)
T 2d0o_A 596 TGLILS 601 (610)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886554
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.92 E-value=1.2e-09 Score=104.46 Aligned_cols=177 Identities=14% Similarity=0.151 Sum_probs=107.1
Q ss_pred cchhhhhhccCC-----ceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHHHHHHHHHHhcCCCccchhHHHHHH
Q 017078 138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
-+|+||.+++-. ...++||+|+++|+++.+.+|..+ +...+++||+++|..+..-|. ..+...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg--------~~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG--------LEDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT--------CSCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence 677777776632 468999999999999999999888 778899999999999998883 22367899
Q ss_pred HHhHhccccccCH----HHHHhhccC--CC----CccceEEcCCCcEEeeCCcccccccccCCCccCCCcCCCHHH--HH
Q 017078 213 DMKEKLAYIALDY----EQELETSKT--SS----AVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHE--TT 280 (377)
Q Consensus 213 ~ik~~~~~v~~~~----~~~~~~~~~--~~----~~~~~~~lpd~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~--~I 280 (377)
++|. |+....+. .++-..... ++ ..++...+.+...+.+ +.|. ++.+ ++
T Consensus 462 rIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I-~~R~-----------------~vEElelV 522 (607)
T 1nbw_A 462 AIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPI-DNAS-----------------PLEKIRLV 522 (607)
T ss_dssp HHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEE-CCSS-----------------CHHHHHHH
T ss_pred Hhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCc-----------------chHHHHHH
Confidence 9999 88765432 111000000 00 0001011111111122 1111 1333 22
Q ss_pred HHHHhcC---ChhHHH-----Hh-----hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECC-----CCCcccee
Q 017078 281 YNSIMKC---DVDIRK-----DL-----YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP-----PERKYSVW 342 (377)
Q Consensus 281 ~~~i~~~---~~~~~~-----~l-----~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w 342 (377)
.+.+.+. ...+|+ .+ +..||||||+|.++|+.+-.++.|..+ .|++-.| ..|.|++.
T Consensus 523 R~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtA 597 (607)
T 1nbw_A 523 RRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVA 597 (607)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHH
T ss_pred HHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHH
Confidence 3331110 111111 11 256999999999999999999999773 3454443 36788888
Q ss_pred hhhHHh
Q 017078 343 IGGSIL 348 (377)
Q Consensus 343 ~Gasi~ 348 (377)
.|=.+|
T Consensus 598 vGLlly 603 (607)
T 1nbw_A 598 TGLLLA 603 (607)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 886544
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.59 E-value=3.1e-08 Score=89.40 Aligned_cols=51 Identities=25% Similarity=0.448 Sum_probs=42.1
Q ss_pred HHHhhcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc
Q 017078 292 RKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 292 ~~~l~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
+....+.|+++||.++.|+++++|++.+. .++..|++|++....||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHHH
Confidence 34456789999999999999999987772 2567788999998999999984
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.73 E-value=9.1e-05 Score=66.24 Aligned_cols=48 Identities=17% Similarity=0.383 Sum_probs=39.1
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.++.+++.+.+.+.|.. +|..+++++++.-+||+++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 36799999999999999999988832 3555667788889999999854
No 29
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.72 E-value=0.008 Score=53.99 Aligned_cols=53 Identities=11% Similarity=0.085 Sum_probs=41.2
Q ss_pred hhhhhcccccCCCeEEeecchhhhhhcc-----CCceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 120 KMTQIMFETFNAPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 120 ~l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
.+.+.+ +.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||.+...
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 355666 778888 78999999988873 5678999999975 66777889987643
No 30
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.57 E-value=0.0035 Score=57.10 Aligned_cols=74 Identities=16% Similarity=0.107 Sum_probs=52.5
Q ss_pred hHHHHhhhhhcccccCCCeEEeecchhhhhh-------ccC-CceEEEEeCCCCceEEEEeeCCeecccceEEecccHHH
Q 017078 115 KANREKMTQIMFETFNAPAMYVAIQAVLSLY-------ASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~-------~~g-~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~ 186 (377)
...++.+++.+.+..|++ +.++...-=|.| ..+ ..+++|||||+++|.++-..++.+. .....|+|+-.
T Consensus 96 A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~ 172 (315)
T 1t6c_A 96 AKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVN 172 (315)
T ss_dssp STTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHH
T ss_pred CcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHH
Confidence 345566777776777876 334432222221 123 5689999999999999999999886 56789999988
Q ss_pred HHHHH
Q 017078 187 LTDHL 191 (377)
Q Consensus 187 i~~~l 191 (377)
+++.+
T Consensus 173 l~e~~ 177 (315)
T 1t6c_A 173 LTETF 177 (315)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88875
No 31
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.22 E-value=0.027 Score=50.32 Aligned_cols=50 Identities=18% Similarity=0.004 Sum_probs=40.7
Q ss_pred hhcCceeccC-CCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhh
Q 017078 295 LYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 295 l~~nIvl~GG-~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
-+++|+++|| .+..|++.++|.+.+.-. ..++.-++++++...+||++++
T Consensus 236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 236 KTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp TCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred CCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence 3457999999 899999999999776442 3466778889999999999875
No 32
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.08 E-value=0.27 Score=43.97 Aligned_cols=51 Identities=12% Similarity=0.221 Sum_probs=37.9
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|||.||.+..+.|.+++++.+...... .+++..+...+.+.-+||+.++.
T Consensus 240 ~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 240 HIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 5899999998899999999999866543 34454444456778899987763
No 33
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.02 E-value=0.11 Score=47.21 Aligned_cols=50 Identities=16% Similarity=0.125 Sum_probs=37.9
Q ss_pred hhcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeecc
Q 017078 123 QIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~ 174 (377)
+.+-+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||.++.
T Consensus 90 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 90 DKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 3344556887 78999999888752 4578999999976 7777888998875
No 34
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.95 E-value=0.0036 Score=57.00 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=50.0
Q ss_pred HHHHhhhhhcccccCCCeEEeec---chhhhh------hccCCceEEEEeCCCCceEEEEeeCCeecccceEEecccHHH
Q 017078 116 ANREKMTQIMFETFNAPAMYVAI---QAVLSL------YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~------~~~g~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~ 186 (377)
..+..+++.+.+..|++- .++. ++-+.. +.....+++|+|||+++|.++.+.++.+. ....+|+|.-.
T Consensus 89 ~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr 165 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQR 165 (315)
T ss_dssp TTHHHHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHH
T ss_pred cCHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhH
Confidence 344556666667777763 3333 332221 22223579999999999999999999887 66789999877
Q ss_pred HHHHH
Q 017078 187 LTDHL 191 (377)
Q Consensus 187 i~~~l 191 (377)
+++.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 77654
No 35
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.90 E-value=0.0093 Score=54.95 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=49.0
Q ss_pred HHHHhhhhhcccccCCCeEEeec---chhhhhhc----cC----CceEEEEeCCCCceEEEEeeC--Ceec--ccceEEe
Q 017078 116 ANREKMTQIMFETFNAPAMYVAI---QAVLSLYA----SG----RTTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRL 180 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~----~g----~~~~lVVDiG~~~t~i~pv~~--g~~~--~~~~~~~ 180 (377)
..++.+++.+.+.+|++ +.+++ ++.++.++ .. ...++|+|||+++|.++.+.+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 44556676666767765 23333 33333222 12 256999999999999998877 4331 1256789
Q ss_pred cccHHHHHHHH
Q 017078 181 DLAGRDLTDHL 191 (377)
Q Consensus 181 ~~GG~~i~~~l 191 (377)
|+|+-.+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999988876
No 36
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.74 E-value=0.15 Score=46.43 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=37.0
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCCC-CceEEEECCCCCccceehhhHHhh
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAPS-SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+.+.... ...++|....-.+.+.-+||+.++
T Consensus 272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 5888888888877888888888776532 224556555555677788988765
No 37
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.71 E-value=0.02 Score=55.78 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=50.6
Q ss_pred HHHHhhhhhcccccCCCeEEeecc---hhhhhhc----cC-CceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHH
Q 017078 116 ANREKMTQIMFETFNAPAMYVAIQ---AVLSLYA----SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~~---~~~a~~~----~g-~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i 187 (377)
..+..+++.+-+..|++- .++.. +-+...+ .. ...++|||||+++|.++-..++.+. .....|+|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHH
Confidence 445667777777788763 34432 2222221 12 2379999999999999999888887 567899999888
Q ss_pred HHHH
Q 017078 188 TDHL 191 (377)
Q Consensus 188 ~~~l 191 (377)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 38
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.56 E-value=0.13 Score=46.76 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=37.5
Q ss_pred hccccc-CCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 124 IMFETF-NAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 124 ~lfe~~-~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
.+-+.+ ++| |.+.++.-|++++. +..+.++|-+|.+ +-...|.||.++..
T Consensus 112 ~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G 169 (321)
T 3r8e_A 112 ILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIG 169 (321)
T ss_dssp HHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecC
Confidence 333556 776 77999998887652 4578999999976 77778889988753
No 39
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.51 E-value=0.042 Score=53.41 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=50.4
Q ss_pred HHHHhhhhhcccccCCCeEEeec---chhhhhh----ccCCceEEEEeCCCCceEEEEeeCCeecccceEEecccHHHHH
Q 017078 116 ANREKMTQIMFETFNAPAMYVAI---QAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 188 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~----~~g~~~~lVVDiG~~~t~i~pv~~g~~~~~~~~~~~~GG~~i~ 188 (377)
..+..+++.+.+..|++ |.++. ++-+..+ +.....++|||||+++|.++-+.+|.+. .....|+|.-.++
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLS 176 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehh
Confidence 44556777776777876 23333 2222222 2234578999999999999999999887 6678999998777
Q ss_pred HH
Q 017078 189 DH 190 (377)
Q Consensus 189 ~~ 190 (377)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 40
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.29 E-value=0.04 Score=50.66 Aligned_cols=55 Identities=9% Similarity=0.085 Sum_probs=40.7
Q ss_pred HHhhcCceeccC-CCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhh
Q 017078 293 KDLYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 293 ~~l~~nIvl~GG-~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
+.-+++|+++|| .++.|++.+.|.+.|.---.. .+++.-++++++...+||++++
T Consensus 303 ~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 303 NENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 334468999999 999999999999988531111 2344556678999999998865
No 41
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.08 E-value=0.058 Score=48.99 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=37.6
Q ss_pred hhcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeecc
Q 017078 123 QIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~ 174 (377)
+.+-+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...+.||.++.
T Consensus 102 ~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 102 EQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 3333456777 78899999988752 4578999999987 7777888998775
No 42
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=94.60 E-value=0.41 Score=42.93 Aligned_cols=51 Identities=20% Similarity=0.275 Sum_probs=36.7
Q ss_pred hhcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 123 QIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
+.+-+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||++...
T Consensus 92 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 92 RILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 3444566787 77889988887643 3578899999866 66667789987643
No 43
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=94.00 E-value=0.026 Score=51.04 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=23.6
Q ss_pred ceEEEEeCCCCceEEEEeeCCeecc
Q 017078 150 TTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 150 ~~~lVVDiG~~~t~i~pv~~g~~~~ 174 (377)
.++++||||+++|+|+|+.+|.|+.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 6799999999999999999999985
No 44
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=91.87 E-value=0.9 Score=39.92 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=16.1
Q ss_pred cEEEeCCCCceEEeeeCC
Q 017078 9 PLVCDNGTGMVKAGFAGD 26 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~ 26 (377)
.++||+|.+++|+|+..+
T Consensus 4 lL~IDIGNT~iK~gl~d~ 21 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG 21 (266)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 589999999999998855
No 45
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=91.46 E-value=2.2 Score=39.75 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=37.1
Q ss_pred hcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 124 IMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 124 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
.+-+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||.++..
T Consensus 181 ~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (406)
T 1z6r_A 181 ALEQHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVITDGHLLHA 237 (406)
T ss_dssp HHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEETTT
T ss_pred HHHHHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 333456777 77899988887752 4568999999975 77778889987653
No 46
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=91.27 E-value=0.86 Score=40.11 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=15.5
Q ss_pred EEEeCCCCceEEeeeCCC
Q 017078 10 LVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 10 vviD~Gs~~~k~G~~~~~ 27 (377)
++||+|.+++|+|+..++
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999988543
No 47
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=88.24 E-value=1.2 Score=42.21 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhccccCC-CCCCCcEEEeeCCCCC------hHHHHhhhhhccccc---CC--CeEEeecch-------hh
Q 017078 82 DDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNP------KANREKMTQIMFETF---NA--PAMYVAIQA-------VL 142 (377)
Q Consensus 82 ~~~~~~~~~~~~~~L~~-~~~~~~vvl~~~~~~~------~~~~~~l~~~lfe~~---~~--~~v~~~~~~-------~~ 142 (377)
+.++.+++.+. +.+.. ..+..|+.+.-..-.- ...++.+++.+-+.+ ++ ..+.++... ++
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 34555555553 22221 1245677766543221 113344554444433 22 456666532 23
Q ss_pred hhhccCC------ceEEEEeCCCCceEEEEeeCCe
Q 017078 143 SLYASGR------TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 143 a~~~~g~------~~~lVVDiG~~~t~i~pv~~g~ 171 (377)
+.|..|. .+..++|+|+++|+|+-..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 3344452 5677889999999999776654
No 48
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=87.10 E-value=1.7 Score=37.79 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=16.2
Q ss_pred cEEEeCCCCceEEeeeCCC
Q 017078 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~ 27 (377)
-++||+|.+++|+|+..++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 4889999999999988543
No 49
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=84.70 E-value=4.9 Score=35.50 Aligned_cols=69 Identities=16% Similarity=0.071 Sum_probs=45.6
Q ss_pred cEEEeeCCCCChHHHHhhhhhcccccCC-CeEEeecchhhhhhc-cCCceEEEEeCCCCceEEEEeeCCeec
Q 017078 104 PVLLTEAPLNPKANREKMTQIMFETFNA-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 104 ~vvl~~~~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~~~lVVDiG~~~t~i~pv~~g~~~ 173 (377)
.+-+..|-.. ......+.+.+-+.+++ ..+.+.++.-+|+++ .+..+++++=+|.+..-...+.||+..
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 4666667654 22222344444445665 358899999999997 567788888887776455556799875
No 50
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=75.29 E-value=24 Score=31.09 Aligned_cols=89 Identities=13% Similarity=0.196 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhccccCCCCCC---CcEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhcc-CCceEEEEe
Q 017078 81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS-GRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVD 156 (377)
++.+...++.++ +..+.++.+ ..+-+..|-.........+ +..|.. +. .|.+.++.-+++++. +..++++|-
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~l-~~~~~~-~~-pv~v~NDa~aaa~ge~~~~~~v~v~ 128 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEF-ESQAPG-FA-RLSLATDGYTTLLGAHGGQPGIIVA 128 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHH-HHTCCC-CS-EEEEECHHHHHHHHHTTTSSEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHHH-HHhCCC-Cc-eEEEECCHHHHHHhhcCCCCeEEEE
Confidence 345555555554 333443333 2366667765443322222 222221 33 488999999988874 567888888
Q ss_pred CCCCceEEEEeeCCeec
Q 017078 157 SGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 157 iG~~~t~i~pv~~g~~~ 173 (377)
+|.+..-...+.+|...
T Consensus 129 ~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 129 LGTGSIGEALYPDGSHR 145 (305)
T ss_dssp ESSSEEEEEECTTSCEE
T ss_pred ecCCeEEEEEeCCCcEE
Confidence 88775433333488754
No 51
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=74.21 E-value=12 Score=32.81 Aligned_cols=55 Identities=24% Similarity=0.343 Sum_probs=36.2
Q ss_pred cEEEeeCCCCChHHHHhhhhhcccccCCCeEEeecchhhhhhccC-CceEEEEeCCCC
Q 017078 104 PVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-RTTGIVLDSGDG 160 (377)
Q Consensus 104 ~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVVDiG~~ 160 (377)
.+-+..|-..+......+.+.+-+ ++.| |.+.++.-+++++.. ..+.++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 566677766433333344454434 6654 678888888887653 578889999987
No 52
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=71.39 E-value=6.8 Score=35.41 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=35.2
Q ss_pred cccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeecc
Q 017078 127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|.+..
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 456777 77899988887753 3568999999976 6677888998764
No 53
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=71.23 E-value=14 Score=32.28 Aligned_cols=50 Identities=12% Similarity=0.036 Sum_probs=37.2
Q ss_pred hhhcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeecc
Q 017078 122 TQIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 122 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~ 174 (377)
.+.+-+.+++| |.+.++.-+++++. +. +.++|.+|.+ +-...|.||.+..
T Consensus 89 ~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 89 VKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 34444556777 77899998887753 23 8999999977 6777888998774
No 54
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=69.29 E-value=10 Score=33.85 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=37.3
Q ss_pred hhcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 123 QIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
+.+-+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|.+...
T Consensus 114 ~~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 114 ADLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 3333456777 78999999888752 3568899999876 66777889987653
No 55
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=66.96 E-value=3.4 Score=37.87 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=26.2
Q ss_pred ceEEEEeCCCCceEEEEeeC--CeecccceEEecccHH
Q 017078 150 TTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLAGR 185 (377)
Q Consensus 150 ~~~lVVDiG~~~t~i~pv~~--g~~~~~~~~~~~~GG~ 185 (377)
.+.+|+|||+++|.++-..+ +.+.......+++||.
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 46999999999999997754 3444333467788873
No 56
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=66.55 E-value=42 Score=30.60 Aligned_cols=53 Identities=15% Similarity=0.238 Sum_probs=38.2
Q ss_pred hhhhcccccCCCeEEeecchhhhhhcc---C-----------------CceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 121 MTQIMFETFNAPAMYVAIQAVLSLYAS---G-----------------RTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~~---g-----------------~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
+.+.+-+.+++| |.+.++.-|++++. | ..+.++|-+|. .+-...|.||.++..
T Consensus 100 l~~~L~~~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGt-GIG~givi~G~l~~G 172 (366)
T 3mcp_A 100 LGPFLEDIFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGT-GFGAGVVIDGELLRG 172 (366)
T ss_dssp HHHHHHHHHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESS-SEEEEEEETTEECCC
T ss_pred HHHHHHHHHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECC-cceEEEEECCEEecC
Confidence 344444667888 78999988887642 2 46888898885 466777889988754
No 57
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=66.19 E-value=25 Score=31.52 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhccccCCCCC--CCcEEEeeCCCCChHHHHhhhhhcccccC---CCeEEeecchhhhhhccCCceEEEE
Q 017078 81 WDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFN---APAMYVAIQAVLSLYASGRTTGIVL 155 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~--~~~vvl~~~~~~~~~~~~~l~~~lfe~~~---~~~v~~~~~~~~a~~~~g~~~~lVV 155 (377)
++.+...++.++ +..+..+. -..+-+..|-.........+.+.+-+.++ .| |.+.++.-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEE
Confidence 445555555554 33333322 24567777876655444445555545565 44 7789999888887534678888
Q ss_pred eCCCCceEEEEeeCCee
Q 017078 156 DSGDGVSHTVPIYEGYA 172 (377)
Q Consensus 156 DiG~~~t~i~pv~~g~~ 172 (377)
-+|.+.-......+|..
T Consensus 127 ~~GTGig~~~v~~~G~~ 143 (347)
T 2ch5_A 127 ISGTGSNCRLINPDGSE 143 (347)
T ss_dssp EESSSEEEEEECTTSCE
T ss_pred EEcCCceeEEEcCCCCE
Confidence 88875433322235643
No 58
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=60.59 E-value=21 Score=31.15 Aligned_cols=17 Identities=24% Similarity=0.225 Sum_probs=15.1
Q ss_pred cEEEeCCCCceEEeeeC
Q 017078 9 PLVCDNGTGMVKAGFAG 25 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~ 25 (377)
-++||+|.+++|+|+..
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 38999999999999874
No 59
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=56.86 E-value=4.6 Score=35.50 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=36.0
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhh
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+.+.... ..+++..+.....+...||+.++
T Consensus 236 ~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 236 CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 5888898887788999999888775321 24455544444567788988765
No 60
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=55.99 E-value=7 Score=34.42 Aligned_cols=53 Identities=9% Similarity=0.095 Sum_probs=36.6
Q ss_pred hhhhcccccCC-CeEEeecchhhhhhcc-CCceEEEEeCCCCceEEEEeeCCeec
Q 017078 121 MTQIMFETFNA-PAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 121 l~~~lfe~~~~-~~v~~~~~~~~a~~~~-g~~~~lVVDiG~~~t~i~pv~~g~~~ 173 (377)
+.+.+-+.++. ..|.+.++.-+|+++. +..++++|=+|.+..-...+.||...
T Consensus 76 l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 76 LRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp HHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEE
T ss_pred HHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEE
Confidence 44444345564 2488999999999864 66788888888766445566788775
No 61
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=55.99 E-value=31 Score=31.67 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=36.0
Q ss_pred cCceeccCCCCCCC-hHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 297 GNIVLSGGSTMFPG-IADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g-~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|||+||.+...- |.+++++.+.... ++.+........+...||+.++..
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcC
Confidence 46999999987655 8899998887664 355554433345678888877643
No 62
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=49.48 E-value=31 Score=31.52 Aligned_cols=51 Identities=14% Similarity=0.150 Sum_probs=37.1
Q ss_pred hhcccccCCCeEEeecchhhhhhcc---C--CceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 123 QIMFETFNAPAMYVAIQAVLSLYAS---G--RTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~---g--~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
+.+-+.+++| |.+.++.-+++++. | ..+.++|-+|.+ +-...|.||.++..
T Consensus 182 ~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 182 NLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred HHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 3333456776 78999998887753 3 378999999875 66777889987643
No 63
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=47.63 E-value=10 Score=34.81 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=35.2
Q ss_pred CceeccCCCCC-CChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc
Q 017078 298 NIVLSGGSTMF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i-~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+.. +-|.+++++.+.........+++........+...||+.++.
T Consensus 317 ~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 317 KIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp EEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred EEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 58888888764 667788888887765422334554443344567889887763
No 64
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=47.24 E-value=1.3e+02 Score=25.51 Aligned_cols=53 Identities=23% Similarity=0.356 Sum_probs=38.1
Q ss_pred hhhhcccccCCCeEEeecchhhhhhcc-----C--Cc-eEEEEeCCCCceEEEEeeCCeeccc
Q 017078 121 MTQIMFETFNAPAMYVAIQAVLSLYAS-----G--RT-TGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g--~~-~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
+.+.+-+.+++| |.+.++.-|++++. + .. +.++|-+|.+ +-...|.||.++..
T Consensus 106 l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l~~G 166 (267)
T 1woq_A 106 IDALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKLVPN 166 (267)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEEETT
T ss_pred HHHHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEEccC
Confidence 334444567888 88999999988762 2 23 5678889874 88888999987753
No 65
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=44.38 E-value=15 Score=32.52 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=38.4
Q ss_pred hhhcccccCCCeEEeecchhhhhhcc-------CCceEEEEeCCCCceEEEEeeCCeeccc
Q 017078 122 TQIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 122 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~pv~~g~~~~~ 175 (377)
.+.+-+.+++| |.+.++.-|++++- +..+.+.|-+|.+ +-...|.||.++..
T Consensus 90 ~~~l~~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 148 (302)
T 3epq_A 90 LQTVXNEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQG 148 (302)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCS
T ss_pred HHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEccc
Confidence 34444567888 78999988887643 3578899999864 77777889988764
No 66
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=39.84 E-value=23 Score=31.47 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=38.5
Q ss_pred CceeccCCCCCCC-hHHHHHHHHHhhCCC---CceEEEECCCCCccceehhhHHhhccccccccc
Q 017078 298 NIVLSGGSTMFPG-IADRMSKEISALAPS---SMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 358 (377)
Q Consensus 298 nIvl~GG~s~i~g-~~~rl~~eL~~~~~~---~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~ 358 (377)
.|||-||.+..+. +.++|.+.+++.+.. ...+++..+.....+..+||+.++.-..|.+-|
T Consensus 242 ~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 242 AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 4888888887654 467788787766531 124566555555678899999887554444433
No 67
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=36.97 E-value=26 Score=33.15 Aligned_cols=51 Identities=12% Similarity=0.189 Sum_probs=39.7
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCCC------CceEEEECCCCCccceehhhHHhhcc
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAPS------SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~~------~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|.+-||....|+|.+++++.+..+++. ..+|.+.... -++=+||+++|..
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~---dgsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAI---DGXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECC---CTTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECC---CchhhhHHHHHHH
Confidence 4777788867899999999999988754 3467776664 4578899998866
No 68
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=35.50 E-value=18 Score=34.49 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=31.4
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++||.|+-+-+.+.+..-+ +.+|.+.. ....++-+||+++|..
T Consensus 387 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~--~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 387 PQSVTLIGGGARSEYWRQMLADIS------GQQLDYRT--GGDVGPALGAARLAQI 434 (484)
T ss_dssp CSCEEEESGGGCCHHHHHHHHHHH------CCCEEEES--CTTSCHHHHHHHHHHH
T ss_pred cceEEEEeccccCHHHHHHHHHHh------CCeEEeCC--CCCcccHHHHHHHHHH
Confidence 356999999999876655555444 22444433 3334468899998854
No 69
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=35.43 E-value=67 Score=27.80 Aligned_cols=49 Identities=12% Similarity=-0.039 Sum_probs=34.1
Q ss_pred EEEEeCCCCceEEEEeeCCeecccceEEe-cccHHHHHHHHHHHHHhcCC
Q 017078 152 GIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDHLMKILTERGY 200 (377)
Q Consensus 152 ~lVVDiG~~~t~i~pv~~g~~~~~~~~~~-~~GG~~i~~~l~~~l~~~~~ 200 (377)
-|+||+|.+.+.+..+.++..+....... ....+.+...+..++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 48999999999999888876663332222 34566777777888776554
No 70
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=34.32 E-value=26 Score=32.14 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=36.1
Q ss_pred hhhhcccccCCCeEEeecchh---------hhhh-----------------c------cCC--c--eEEEEeCCCCceEE
Q 017078 121 MTQIMFETFNAPAMYVAIQAV---------LSLY-----------------A------SGR--T--TGIVLDSGDGVSHT 164 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~---------~a~~-----------------~------~g~--~--~~lVVDiG~~~t~i 164 (377)
+.+.+-+.+++|.+ +.++.- ++++ + .++ . +.+++-+|.+ +..
T Consensus 112 l~~~l~~~~~~Pv~-v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtG-iG~ 189 (381)
T 1saz_A 112 IAHRFSSETGVPAY-VVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGG-ISI 189 (381)
T ss_dssp HHHHHHHHHCCCEE-EESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSS-EEE
T ss_pred HHHHHHHhcCCCEE-EeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCC-cEE
Confidence 44445567788865 777776 5554 2 233 4 8899999875 678
Q ss_pred EEeeCCeeccc
Q 017078 165 VPIYEGYALPH 175 (377)
Q Consensus 165 ~pv~~g~~~~~ 175 (377)
..|.||+++..
T Consensus 190 g~i~~G~~~~G 200 (381)
T 1saz_A 190 AAHRKGRVIDV 200 (381)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCEEEEe
Confidence 88889987743
No 71
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=32.85 E-value=35 Score=32.53 Aligned_cols=47 Identities=17% Similarity=0.168 Sum_probs=32.1
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.|+-+-+.+-+..-+ +.+|.+.... .++-+||+++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~~~---e~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADIL------NRKVIRPVVK---ETTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhc------CCeEEEcCCC---cchHHHHHHHHHH
Confidence 467999999999876665555444 2255554433 3678899999854
No 72
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=31.60 E-value=19 Score=28.52 Aligned_cols=67 Identities=9% Similarity=0.019 Sum_probs=44.5
Q ss_pred cCCCeEEeecchhhhhhccCCceEEEEeCCCCceEEEEeeCCee-cccceEEecccHHHHHHHHHHHHHhc
Q 017078 129 FNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDHLMKILTER 198 (377)
Q Consensus 129 ~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~pv~~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~ 198 (377)
+.+..+.+-++.+.++--....+-|.+|+---.|..+||..|.- ..+......+ +++..+.++|+..
T Consensus 22 ihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V---~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 22 IHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLV---HVNDLFLQYIQKN 89 (156)
T ss_dssp EEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEE---CCSHHHHHHHHHC
T ss_pred EEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEE---EeCHHHHHHHhcC
Confidence 34455556555555444445678999999999999999999843 3333444444 4566777777654
No 73
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=31.36 E-value=27 Score=31.41 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=23.5
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhh
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISAL 322 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~ 322 (377)
.++|+++||.+.-..+.++|.+.+...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999888654
No 74
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=30.12 E-value=41 Score=31.99 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=32.2
Q ss_pred cCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+..-+ +.+|.+.... .++-+||+++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~------g~pV~~~~~~---e~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLL------GVPVAVPEVT---ETTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHh------CCeeEecCCc---ccHHHHHHHHHHh
Confidence 56999999999876666655555 2355554433 3678899998865
No 75
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=30.09 E-value=15 Score=33.64 Aligned_cols=23 Identities=13% Similarity=0.432 Sum_probs=20.2
Q ss_pred cCceeccCCCCCCChHHHHHHHH
Q 017078 297 GNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~eL 319 (377)
+.|++|||++.-|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999988888666
No 76
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=29.85 E-value=34 Score=32.37 Aligned_cols=22 Identities=14% Similarity=-0.071 Sum_probs=18.7
Q ss_pred ceEEEEeCCCCceEEEEeeCCe
Q 017078 150 TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 150 ~~~lVVDiG~~~t~i~pv~~g~ 171 (377)
.+..|+|+|+++|.|+-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4678999999999999886664
No 77
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=28.98 E-value=24 Score=31.73 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=27.5
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCC
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP 335 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~ 335 (377)
.++|+++||.+.-..+.++|.+.+... .+++..++
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~-----g~~v~~p~ 279 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR-----GIKFFVPP 279 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH-----TCEEECCC
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc-----CCEEEecC
Confidence 468999999999999999999888654 23565554
No 78
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=28.95 E-value=13 Score=33.26 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=30.1
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCC-CCceEEEECCCCCccceehhhHHhh
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAP-SSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~-~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+.+-..+++.+..... ....+++..+.....+..+||+.++
T Consensus 272 ~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 272 LLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp EEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred EEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 588888887754443345555554432 1123455544434566778988765
No 79
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=28.32 E-value=37 Score=32.05 Aligned_cols=50 Identities=16% Similarity=0.297 Sum_probs=36.1
Q ss_pred ceeccCCC-CCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 299 IVLSGGST-MFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 299 Ivl~GG~s-~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
|.+-||.. .-|.|.+++++.+..++....+|++... ..+..+||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~---~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLS---EDGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEEC---TTHHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEEC---CCccHHHHHHHHHH
Confidence 33445543 5799999999999988644446666633 56789999998865
No 80
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=28.17 E-value=18 Score=31.78 Aligned_cols=45 Identities=24% Similarity=0.086 Sum_probs=29.0
Q ss_pred CceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhc
Q 017078 298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+..+-|.+++++.+.+. .+.... ...++..||+.++.
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~~---~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIISDL---GKRSPEIGAVILAY 286 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEEEC---CSCCHHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEeccC---CCCChHHHHHHHHH
Confidence 5888888876666667777666554 233322 34667889988774
No 81
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=26.78 E-value=17 Score=33.25 Aligned_cols=23 Identities=17% Similarity=0.518 Sum_probs=19.9
Q ss_pred cCceeccCCCCCCChHHHHHHHH
Q 017078 297 GNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~eL 319 (377)
..|++|||++.-|-|-+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999998888888665
No 82
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=26.69 E-value=51 Score=31.39 Aligned_cols=46 Identities=26% Similarity=0.208 Sum_probs=31.9
Q ss_pred cCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+..-+ +.+|.+.... -++-+||+++|..
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~------g~pV~~~~~~---e~~alGaA~la~~ 454 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDII------NTKIEVSKYK---EVTSLGAAVLAGL 454 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHH------CCeEEecCCC---cchHHHHHHHHHH
Confidence 67999999999876665555544 2355554433 3678899998854
No 83
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=25.80 E-value=56 Score=31.34 Aligned_cols=47 Identities=15% Similarity=0.073 Sum_probs=31.6
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++.|+++||.|+-+-+.+-+..-+ +.+|.+.... -++-+||+++|..
T Consensus 426 ~~~i~~~GGgaks~~~~Qi~ADvl------g~pV~~~~~~---e~~alGAA~lA~~ 472 (520)
T 4e1j_A 426 DTVLRVDGGMVASDWTMQRLSDLL------DAPVDRPVIL---ETTALGVAWLAGS 472 (520)
T ss_dssp -CCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCC---CHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHHHh------CCeEEecCCC---ccHHHHHHHHHHH
Confidence 578999999998876655555444 2255554433 4677899999864
No 84
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=24.83 E-value=18 Score=33.00 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=34.8
Q ss_pred hhhhcccccCCCeEEeecchhhhhhc----------------c--------------C----CceEEEEeCCCCceEEEE
Q 017078 121 MTQIMFETFNAPAMYVAIQAVLSLYA----------------S--------------G----RTTGIVLDSGDGVSHTVP 166 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~~~lVVDiG~~~t~i~p 166 (377)
+.+.+-+.+++.-|.+.++.-+++++ . | ..+.++|-+|.+ +-...
T Consensus 119 l~~~l~~~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gi 197 (373)
T 2q2r_A 119 LSDYPKALFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSL 197 (373)
T ss_dssp GGGSCTTTSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEE
T ss_pred HHHHHHHhcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEE
Confidence 33333233677458899999998887 2 3 257899999866 55667
Q ss_pred eeCCeecc
Q 017078 167 IYEGYALP 174 (377)
Q Consensus 167 v~~g~~~~ 174 (377)
|.+|.+..
T Consensus 198 i~~g~l~~ 205 (373)
T 2q2r_A 198 IYYNPPMN 205 (373)
T ss_dssp EEECC---
T ss_pred EecCcccC
Confidence 77886654
No 85
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=23.78 E-value=25 Score=35.72 Aligned_cols=27 Identities=30% Similarity=0.314 Sum_probs=22.1
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhh
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISAL 322 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~ 322 (377)
.+||+|+||.+.-.-+.++|.+.|...
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~~ 732 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEAN 732 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGGS
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHHC
Confidence 468999999999887888888777653
No 86
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=23.08 E-value=1.3e+02 Score=26.37 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=36.0
Q ss_pred CceeccCCCCC-CChHHHHHHHHHhhCC-C--CceEEEECCCCCccceehhhHHhhcc
Q 017078 298 NIVLSGGSTMF-PGIADRMSKEISALAP-S--SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIvl~GG~s~i-~g~~~rl~~eL~~~~~-~--~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|+|.||.+.. +-|.+.+++.+.+... . ...++|........+.-+||+.++..
T Consensus 255 ~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~~ 312 (321)
T 3vgl_A 255 AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQ 312 (321)
T ss_dssp EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHHT
T ss_pred EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHHh
Confidence 47888888775 3457888888887664 1 12356655555567788898877643
No 87
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=22.76 E-value=30 Score=36.01 Aligned_cols=50 Identities=14% Similarity=0.313 Sum_probs=38.4
Q ss_pred CceeccCCCCC-CChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 298 NIVLSGGSTMF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIvl~GG~s~i-~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|++-||.+.- |.|.+++++.+.++.+. .++++... +-+.-+||+++|..
T Consensus 409 ~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 409 TVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred EEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 46666666665 99999999999998754 46777665 46688999998865
No 88
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=22.44 E-value=66 Score=30.68 Aligned_cols=47 Identities=15% Similarity=0.012 Sum_probs=31.4
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.|+-+-+.+.+..-+ +.+|.+.... -++-+||+++|..
T Consensus 394 ~~~i~~~GGga~s~~~~Qi~ADv~------g~pV~~~~~~---e~~alGaA~lA~~ 440 (504)
T 3ll3_A 394 PVAINATGGFLKSDFVRQLCANIF------NVPIVTMKEQ---QSGTLAAMFLARQ 440 (504)
T ss_dssp CSEEEEESGGGCSHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred CCEEEEeCchhcCHHHHHHHHHhh------CCeEEecCCC---CchhHHHHHHHHH
Confidence 356999999999876655554444 2255554432 4678899998864
No 89
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=22.32 E-value=42 Score=29.96 Aligned_cols=49 Identities=14% Similarity=0.166 Sum_probs=31.0
Q ss_pred CceeccCCCC-CCChHHHHHHHHHhhC--CC---CceEEEECCCCCccceehhhHHhh
Q 017078 298 NIVLSGGSTM-FPGIADRMSKEISALA--PS---SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~-i~g~~~rl~~eL~~~~--~~---~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+. .+-|.+.+++.+.... +. ..++.+... .. +...||+.++
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-a~~~GAa~la 322 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--RH-SSALGGASLG 322 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--SS-CTHHHHHHHH
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--CC-ChHHHHHHHH
Confidence 5788888764 3667788888887764 21 223443332 24 7788998876
No 90
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=20.72 E-value=36 Score=32.61 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=31.2
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEE-ECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKV-VAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v-~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||+|+-+-+.+-+..-+ ...| ..+ .+..++-+||+++|..
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~--------g~pV~~~~-~~~e~~alGaA~lA~~ 450 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL--------NVSLLVKP-DAHLHPLRGLAALAAV 450 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH--------TCEEEECC-CGGGHHHHHHHHHHHH
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH--------CCeeEEec-CCCCchHHHHHHHHHH
Confidence 677999999998875555444433 2244 332 2456778999999864
No 91
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=20.39 E-value=72 Score=30.37 Aligned_cols=47 Identities=9% Similarity=0.137 Sum_probs=31.6
Q ss_pred hcCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++.|+++||.|+-+-+.+-+..-+ +.+|.+.... -++-+||+++|..
T Consensus 404 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~~~---e~~alGaA~lA~~ 450 (504)
T 2d4w_A 404 LTELRVDGGMVANELLMQFQADQL------GVDVVRPKVA---ETTALGAAYAAGI 450 (504)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred cceEEEeCCcccCHHHHHHHHHHh------CCeEEeCCCC---cchHHHHHHHHHh
Confidence 356999999999876665555444 2355554443 4678899998865
No 92
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=20.29 E-value=46 Score=31.91 Aligned_cols=46 Identities=24% Similarity=0.226 Sum_probs=31.3
Q ss_pred cCceeccCCCCCCChHHHHHHHHHhhCCCCceEEEECCCCCccceehhhHHhhcc
Q 017078 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+..-+ +.+|.+.... -++-+||+++|..
T Consensus 426 ~~i~~~GGgaks~~~~Qi~ADvl------g~pV~~~~~~---e~~alGAA~lA~~ 471 (515)
T 3i8b_A 426 TRILLIGGGAKSEAIRTLAPSIL------GMDVTRPATD---EYVAIGAARQAAW 471 (515)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHH------TSCEEEECCC---CHHHHHHHHHHHH
T ss_pred CEEEEECchhcCHHHHHHHHHHh------CCceEecCCc---ccHHHHHHHHHHH
Confidence 56999999998876655555444 2255554433 4678899998854
Done!