Query 017080
Match_columns 377
No_of_seqs 457 out of 2944
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:36:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017080.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017080hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ege_A Putative methyltransfer 99.9 1.5E-23 5E-28 193.3 0.6 229 94-356 4-239 (261)
2 3gu3_A Methyltransferase; alph 99.8 6.7E-22 2.3E-26 184.4 6.2 227 117-361 17-266 (284)
3 2p7i_A Hypothetical protein; p 99.8 7.4E-21 2.5E-25 172.5 12.0 178 88-274 6-193 (250)
4 3ou2_A SAM-dependent methyltra 99.8 5.7E-21 1.9E-25 170.1 10.4 184 87-274 7-199 (218)
5 4hg2_A Methyltransferase type 99.8 7.2E-21 2.4E-25 174.9 10.7 128 92-223 8-139 (257)
6 3e23_A Uncharacterized protein 99.8 8.8E-21 3E-25 168.6 10.8 162 89-274 11-176 (211)
7 3l8d_A Methyltransferase; stru 99.8 2.1E-20 7E-25 169.5 12.3 171 90-277 15-197 (242)
8 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.1E-20 7.1E-25 172.3 12.3 151 120-274 68-239 (261)
9 3h2b_A SAM-dependent methyltra 99.8 4.9E-21 1.7E-25 169.1 7.8 163 90-274 4-176 (203)
10 3dtn_A Putative methyltransfer 99.8 2.7E-20 9.1E-25 168.1 11.1 158 111-274 33-208 (234)
11 3hnr_A Probable methyltransfer 99.8 1.2E-20 4E-25 168.7 7.1 175 92-274 6-195 (220)
12 3dli_A Methyltransferase; PSI- 99.8 1.2E-20 4.1E-25 171.3 6.5 144 112-274 31-178 (240)
13 4htf_A S-adenosylmethionine-de 99.8 5.1E-20 1.8E-24 171.4 8.9 157 113-274 58-226 (285)
14 1vlm_A SAM-dependent methyltra 99.8 1.9E-19 6.6E-24 161.1 12.3 144 116-276 41-184 (219)
15 2gs9_A Hypothetical protein TT 99.8 3.1E-19 1.1E-23 158.5 13.0 134 121-271 35-171 (211)
16 3dlc_A Putative S-adenosyl-L-m 99.8 5.7E-20 1.9E-24 163.5 7.4 145 120-274 42-197 (219)
17 2o57_A Putative sarcosine dime 99.8 4.8E-19 1.6E-23 165.7 13.4 139 119-274 79-228 (297)
18 1vl5_A Unknown conserved prote 99.8 1.9E-19 6.4E-24 165.3 9.6 150 110-274 26-184 (260)
19 2p35_A Trans-aconitate 2-methy 99.8 6.2E-19 2.1E-23 161.3 12.8 145 120-274 31-184 (259)
20 3bus_A REBM, methyltransferase 99.8 5.4E-19 1.8E-23 163.2 12.4 142 119-274 58-210 (273)
21 3dh0_A SAM dependent methyltra 99.8 7.9E-19 2.7E-23 156.6 12.9 136 112-274 28-175 (219)
22 3f4k_A Putative methyltransfer 99.8 4.3E-19 1.5E-23 162.3 11.2 182 85-288 10-203 (257)
23 3kkz_A Uncharacterized protein 99.8 9.2E-19 3.1E-23 161.4 13.3 151 116-286 40-201 (267)
24 1pjz_A Thiopurine S-methyltran 99.8 2.2E-19 7.4E-24 159.2 8.2 129 120-274 20-170 (203)
25 2yqz_A Hypothetical protein TT 99.8 3E-19 1E-23 163.7 9.2 147 119-274 36-190 (263)
26 2gb4_A Thiopurine S-methyltran 99.8 1.4E-18 4.7E-23 159.2 13.6 164 83-274 28-221 (252)
27 3ccf_A Cyclopropane-fatty-acyl 99.8 9.2E-19 3.2E-23 162.5 12.1 153 112-274 48-204 (279)
28 1xxl_A YCGJ protein; structura 99.8 6.4E-19 2.2E-23 159.9 10.5 142 119-274 18-168 (239)
29 3pfg_A N-methyltransferase; N, 99.8 6E-19 2E-23 162.2 9.9 102 120-222 48-154 (263)
30 3lcc_A Putative methyl chlorid 99.8 2.2E-18 7.5E-23 155.7 13.2 160 86-274 31-201 (235)
31 1nkv_A Hypothetical protein YJ 99.8 2.3E-18 7.8E-23 157.3 13.1 138 119-274 33-181 (256)
32 3mgg_A Methyltransferase; NYSG 99.8 4.5E-19 1.5E-23 164.1 7.9 147 119-274 34-192 (276)
33 2aot_A HMT, histamine N-methyl 99.8 3.2E-19 1.1E-23 166.8 7.0 139 121-274 51-215 (292)
34 4fsd_A Arsenic methyltransfera 99.8 1.3E-18 4.4E-23 169.1 11.4 139 120-274 81-245 (383)
35 3g5l_A Putative S-adenosylmeth 99.8 1E-18 3.5E-23 159.6 8.6 97 122-221 44-147 (253)
36 3sm3_A SAM-dependent methyltra 99.8 2.7E-18 9.3E-23 154.3 10.8 155 120-274 28-201 (235)
37 2ex4_A Adrenal gland protein A 99.8 1.6E-18 5.4E-23 157.3 9.3 165 88-274 31-219 (241)
38 3ujc_A Phosphoethanolamine N-m 99.8 3.6E-18 1.2E-22 156.6 11.6 140 120-274 53-200 (266)
39 3bkw_A MLL3908 protein, S-aden 99.7 3.2E-18 1.1E-22 154.9 10.6 108 110-221 32-146 (243)
40 3ocj_A Putative exported prote 99.7 4.6E-18 1.6E-22 160.0 11.6 153 119-274 115-285 (305)
41 3vc1_A Geranyl diphosphate 2-C 99.7 2.1E-18 7.2E-23 162.8 9.1 138 120-274 115-263 (312)
42 2p8j_A S-adenosylmethionine-de 99.7 2.5E-18 8.7E-23 152.1 8.3 156 112-274 13-177 (209)
43 1y8c_A S-adenosylmethionine-de 99.7 4.7E-18 1.6E-22 153.9 9.9 108 113-221 27-144 (246)
44 3e8s_A Putative SAM dependent 99.7 1.6E-18 5.4E-23 154.9 6.5 175 89-274 11-203 (227)
45 3jwh_A HEN1; methyltransferase 99.7 1.2E-17 4.1E-22 149.0 11.1 139 121-274 28-186 (217)
46 3cc8_A Putative methyltransfer 99.7 1.4E-17 4.9E-22 149.0 11.4 143 121-274 31-179 (230)
47 2a14_A Indolethylamine N-methy 99.7 1.4E-17 4.9E-22 153.3 11.6 135 120-274 53-232 (263)
48 3jwg_A HEN1, methyltransferase 99.7 1E-17 3.5E-22 149.5 9.7 139 121-274 28-186 (219)
49 1xtp_A LMAJ004091AAA; SGPP, st 99.7 5.5E-18 1.9E-22 154.5 8.0 164 90-274 52-232 (254)
50 2g72_A Phenylethanolamine N-me 99.7 8.4E-18 2.9E-22 156.8 9.4 134 121-274 70-250 (289)
51 4e2x_A TCAB9; kijanose, tetron 99.7 3.1E-18 1.1E-22 168.1 6.7 136 120-274 105-247 (416)
52 1ri5_A MRNA capping enzyme; me 99.7 6.9E-18 2.4E-22 157.4 8.6 135 88-222 20-177 (298)
53 3g5t_A Trans-aconitate 3-methy 99.7 8.5E-18 2.9E-22 157.6 9.2 97 121-221 35-151 (299)
54 3d2l_A SAM-dependent methyltra 99.7 7.4E-18 2.5E-22 152.5 7.9 126 95-221 4-139 (243)
55 1kpg_A CFA synthase;, cyclopro 99.7 2.9E-17 1E-21 152.8 12.1 148 120-274 62-222 (287)
56 3g2m_A PCZA361.24; SAM-depende 99.7 4.9E-18 1.7E-22 159.2 6.8 100 122-223 82-194 (299)
57 3ofk_A Nodulation protein S; N 99.7 3.2E-17 1.1E-21 145.9 11.7 134 87-221 13-156 (216)
58 3bxo_A N,N-dimethyltransferase 99.7 7.2E-18 2.5E-22 152.2 6.5 103 120-223 38-145 (239)
59 3hem_A Cyclopropane-fatty-acyl 99.7 3.8E-17 1.3E-21 153.3 11.7 146 120-274 70-237 (302)
60 3i9f_A Putative type 11 methyl 99.7 1.9E-17 6.6E-22 141.7 8.8 124 120-274 15-142 (170)
61 2i62_A Nicotinamide N-methyltr 99.7 3.9E-17 1.3E-21 149.7 10.2 134 121-274 55-233 (265)
62 3bkx_A SAM-dependent methyltra 99.7 1.4E-16 4.6E-21 147.2 12.9 151 119-274 40-213 (275)
63 2zfu_A Nucleomethylin, cerebra 99.7 6.1E-17 2.1E-21 144.1 8.6 117 112-274 57-173 (215)
64 2pxx_A Uncharacterized protein 99.7 2.2E-16 7.5E-21 139.8 12.1 137 86-222 5-162 (215)
65 3g07_A 7SK snRNA methylphospha 99.7 1E-16 3.5E-21 150.0 10.2 141 121-275 45-264 (292)
66 3ggd_A SAM-dependent methyltra 99.7 9.2E-17 3.1E-21 145.8 9.1 154 113-274 47-213 (245)
67 3cgg_A SAM-dependent methyltra 99.7 2.8E-16 9.7E-21 136.7 11.8 121 120-274 44-169 (195)
68 2kw5_A SLR1183 protein; struct 99.7 1.4E-16 4.7E-21 140.3 9.6 137 113-274 21-165 (202)
69 2xvm_A Tellurite resistance pr 99.7 6.9E-16 2.4E-20 135.0 13.5 137 111-274 22-167 (199)
70 3thr_A Glycine N-methyltransfe 99.7 2E-16 6.8E-21 147.5 10.6 103 120-222 55-178 (293)
71 1ve3_A Hypothetical protein PH 99.7 8.8E-17 3E-21 143.9 7.8 104 118-222 34-145 (227)
72 2fk8_A Methoxy mycolic acid sy 99.7 2.9E-16 9.8E-21 148.4 11.5 148 120-274 88-248 (318)
73 2qe6_A Uncharacterized protein 99.7 9.5E-16 3.2E-20 142.1 14.5 169 92-276 44-238 (274)
74 3dp7_A SAM-dependent methyltra 99.7 6E-16 2.1E-20 149.1 13.3 145 121-274 178-336 (363)
75 2avn_A Ubiquinone/menaquinone 99.7 6.5E-16 2.2E-20 141.8 12.8 100 120-222 52-155 (260)
76 3iv6_A Putative Zn-dependent a 99.6 8.4E-16 2.9E-20 140.9 10.8 127 93-221 12-150 (261)
77 2vdw_A Vaccinia virus capping 99.6 3.4E-16 1.2E-20 147.0 8.3 102 121-222 47-172 (302)
78 3m70_A Tellurite resistance pr 99.6 3.2E-15 1.1E-19 138.9 13.2 108 111-221 110-225 (286)
79 3i53_A O-methyltransferase; CO 99.6 1.9E-15 6.5E-20 143.7 11.9 136 121-274 168-315 (332)
80 1x19_A CRTF-related protein; m 99.6 3.3E-15 1.1E-19 143.6 13.5 143 120-274 188-342 (359)
81 3p9c_A Caffeic acid O-methyltr 99.6 1.7E-15 5.7E-20 146.1 10.7 144 120-274 199-347 (364)
82 2r3s_A Uncharacterized protein 99.6 2E-15 7E-20 143.4 10.9 142 121-274 164-317 (335)
83 1zx0_A Guanidinoacetate N-meth 99.6 1.2E-16 4E-21 144.6 2.1 102 120-221 58-172 (236)
84 3reo_A (ISO)eugenol O-methyltr 99.6 1.5E-15 5.1E-20 146.6 9.9 143 120-274 201-349 (368)
85 3gwz_A MMCR; methyltransferase 99.6 3.8E-15 1.3E-19 143.9 12.3 139 120-274 200-350 (369)
86 3htx_A HEN1; HEN1, small RNA m 99.6 6.7E-15 2.3E-19 151.3 13.1 100 121-222 720-837 (950)
87 1qzz_A RDMB, aclacinomycin-10- 99.6 5.1E-15 1.8E-19 142.9 11.7 140 120-274 180-333 (374)
88 3m33_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 134.0 9.7 110 120-274 46-161 (226)
89 3mcz_A O-methyltransferase; ad 99.6 4E-15 1.4E-19 142.5 10.3 142 123-275 180-334 (352)
90 2ld4_A Anamorsin; methyltransf 99.6 1.6E-15 5.4E-20 130.7 6.3 114 119-274 9-129 (176)
91 3bgv_A MRNA CAP guanine-N7 met 99.6 9E-15 3.1E-19 137.8 11.6 103 120-222 32-158 (313)
92 1wzn_A SAM-dependent methyltra 99.6 8.3E-15 2.8E-19 133.3 10.7 99 121-221 40-147 (252)
93 3fpf_A Mtnas, putative unchara 99.6 1.3E-14 4.3E-19 134.6 11.2 97 116-220 116-223 (298)
94 1fp1_D Isoliquiritigenin 2'-O- 99.6 4.1E-15 1.4E-19 143.7 8.2 143 120-274 207-354 (372)
95 3orh_A Guanidinoacetate N-meth 99.6 2.2E-15 7.7E-20 136.4 5.9 96 121-219 59-170 (236)
96 2ip2_A Probable phenazine-spec 99.6 8.5E-15 2.9E-19 139.2 9.8 139 120-274 166-316 (334)
97 1tw3_A COMT, carminomycin 4-O- 99.5 1.3E-14 4.5E-19 139.3 10.8 140 120-274 181-333 (360)
98 3mq2_A 16S rRNA methyltransfer 99.5 6.3E-15 2.2E-19 131.3 7.5 96 120-219 25-140 (218)
99 3lst_A CALO1 methyltransferase 99.5 9.5E-15 3.2E-19 139.9 9.0 139 120-274 182-330 (348)
100 3mti_A RRNA methylase; SAM-dep 99.5 2E-14 6.8E-19 124.6 9.8 104 119-222 19-138 (185)
101 3e05_A Precorrin-6Y C5,15-meth 99.5 4.6E-14 1.6E-18 124.4 12.2 97 119-221 37-144 (204)
102 3giw_A Protein of unknown func 99.5 2.6E-14 9E-19 131.0 10.1 139 122-274 78-241 (277)
103 1fp2_A Isoflavone O-methyltran 99.5 1.3E-14 4.6E-19 139.0 8.3 142 120-274 186-335 (352)
104 4df3_A Fibrillarin-like rRNA/T 99.5 2.3E-14 7.7E-19 128.9 8.8 98 119-221 74-184 (233)
105 1af7_A Chemotaxis receptor met 99.5 2.7E-14 9.2E-19 131.9 9.2 96 122-218 105-251 (274)
106 3grz_A L11 mtase, ribosomal pr 99.5 3.2E-14 1.1E-18 125.5 8.6 94 120-221 58-161 (205)
107 3q87_B N6 adenine specific DNA 99.5 3.6E-14 1.2E-18 121.8 8.4 96 121-221 22-125 (170)
108 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1.6E-14 5.5E-19 129.3 5.1 126 89-220 7-151 (218)
109 3p2e_A 16S rRNA methylase; met 99.5 2.6E-14 8.9E-19 128.5 6.4 96 121-219 23-139 (225)
110 3uwp_A Histone-lysine N-methyl 99.5 7.3E-14 2.5E-18 134.3 9.8 135 83-222 121-291 (438)
111 3p9n_A Possible methyltransfer 99.5 4.9E-14 1.7E-18 122.8 7.9 99 121-222 43-156 (189)
112 4a6d_A Hydroxyindole O-methylt 99.5 1.2E-13 4E-18 132.6 11.1 139 120-274 177-328 (353)
113 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.5E-13 5.2E-18 117.9 10.1 95 119-221 22-129 (178)
114 1nt2_A Fibrillarin-like PRE-rR 99.5 1.4E-13 4.8E-18 122.3 9.9 94 120-219 55-161 (210)
115 1dus_A MJ0882; hypothetical pr 99.5 1.6E-13 5.6E-18 119.0 10.0 100 120-222 50-160 (194)
116 1xdz_A Methyltransferase GIDB; 99.5 1.1E-13 3.9E-18 125.3 9.3 92 121-219 69-174 (240)
117 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.6E-13 5.4E-18 122.0 10.0 100 121-220 40-157 (214)
118 1ej0_A FTSJ; methyltransferase 99.5 3.9E-14 1.3E-18 120.8 5.9 108 112-223 12-140 (180)
119 1zg3_A Isoflavanone 4'-O-methy 99.5 7.8E-14 2.7E-18 134.0 7.6 142 121-274 192-341 (358)
120 2fyt_A Protein arginine N-meth 99.4 1.3E-13 4.6E-18 131.5 9.2 98 119-217 61-169 (340)
121 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.1E-13 3.6E-18 123.4 7.7 100 121-220 37-154 (213)
122 1p91_A Ribosomal RNA large sub 99.4 1.7E-13 5.9E-18 125.9 9.1 92 121-222 84-181 (269)
123 3eey_A Putative rRNA methylase 99.4 1.7E-13 5.8E-18 120.0 8.6 104 119-222 19-142 (197)
124 3fzg_A 16S rRNA methylase; met 99.4 3.6E-14 1.2E-18 122.5 4.0 96 120-219 47-152 (200)
125 3q7e_A Protein arginine N-meth 99.4 6.5E-14 2.2E-18 134.2 6.2 98 120-218 64-172 (349)
126 3sso_A Methyltransferase; macr 99.4 2.8E-14 9.5E-19 136.9 3.2 121 95-221 184-326 (419)
127 3njr_A Precorrin-6Y methylase; 99.4 7E-13 2.4E-17 117.2 11.9 95 119-221 52-156 (204)
128 3r0q_C Probable protein argini 99.4 5.3E-14 1.8E-18 136.1 5.1 100 118-219 59-169 (376)
129 3lbf_A Protein-L-isoaspartate 99.4 2.9E-13 9.8E-18 119.7 8.8 94 119-221 74-176 (210)
130 3ckk_A TRNA (guanine-N(7)-)-me 99.4 3.4E-13 1.2E-17 122.0 8.9 100 121-220 45-169 (235)
131 2b3t_A Protein methyltransfera 99.4 8.5E-13 2.9E-17 122.1 11.5 98 121-219 108-238 (276)
132 1fbn_A MJ fibrillarin homologu 99.4 6.4E-13 2.2E-17 119.5 10.3 93 120-218 72-177 (230)
133 2y1w_A Histone-arginine methyl 99.4 3.1E-13 1.1E-17 129.4 8.4 98 120-220 48-156 (348)
134 3evz_A Methyltransferase; NYSG 99.4 1.9E-12 6.4E-17 116.1 13.0 104 118-221 51-181 (230)
135 4azs_A Methyltransferase WBDD; 99.4 3.9E-14 1.3E-18 144.3 2.1 103 120-223 64-177 (569)
136 3id6_C Fibrillarin-like rRNA/T 99.4 2.1E-12 7.1E-17 116.2 13.0 96 120-220 74-182 (232)
137 3dmg_A Probable ribosomal RNA 99.4 4.8E-13 1.6E-17 129.4 9.4 100 121-221 232-342 (381)
138 1g6q_1 HnRNP arginine N-methyl 99.4 3.5E-13 1.2E-17 127.9 7.4 97 120-217 36-143 (328)
139 2esr_A Methyltransferase; stru 99.4 3.2E-13 1.1E-17 116.1 6.5 107 112-222 21-141 (177)
140 1l3i_A Precorrin-6Y methyltran 99.4 7E-13 2.4E-17 114.7 8.5 96 119-221 30-136 (192)
141 1jsx_A Glucose-inhibited divis 99.4 1.2E-12 4E-17 115.4 9.9 90 122-219 65-165 (207)
142 2fhp_A Methylase, putative; al 99.4 5.7E-13 1.9E-17 115.2 7.7 103 116-222 38-157 (187)
143 3lpm_A Putative methyltransfer 99.4 4.9E-13 1.7E-17 122.5 7.7 106 114-219 40-176 (259)
144 2plw_A Ribosomal RNA methyltra 99.4 3.1E-13 1.1E-17 118.6 6.1 99 119-221 19-156 (201)
145 3hp7_A Hemolysin, putative; st 99.4 5.9E-13 2E-17 123.5 8.0 93 121-219 84-185 (291)
146 4dzr_A Protein-(glutamine-N5) 99.4 7E-14 2.4E-18 123.5 1.7 104 115-219 23-164 (215)
147 1vbf_A 231AA long hypothetical 99.4 1E-12 3.4E-17 118.0 9.2 95 119-222 67-168 (231)
148 3g89_A Ribosomal RNA small sub 99.4 7.2E-13 2.5E-17 120.9 8.1 92 121-219 79-184 (249)
149 3u81_A Catechol O-methyltransf 99.4 5.5E-13 1.9E-17 119.2 7.0 103 115-221 51-172 (221)
150 2ift_A Putative methylase HI07 99.4 3.6E-13 1.2E-17 118.7 5.6 97 122-222 53-166 (201)
151 4dcm_A Ribosomal RNA large sub 99.4 2.3E-12 7.8E-17 124.5 11.5 99 121-221 221-336 (375)
152 2nxc_A L11 mtase, ribosomal pr 99.4 7.2E-13 2.5E-17 121.2 7.3 95 120-221 118-220 (254)
153 2yxd_A Probable cobalt-precorr 99.3 2.9E-12 9.8E-17 110.0 10.1 93 119-221 32-133 (183)
154 2yxe_A Protein-L-isoaspartate 99.3 3E-12 1E-16 113.5 10.4 95 119-222 74-180 (215)
155 2ipx_A RRNA 2'-O-methyltransfe 99.3 2.4E-12 8.2E-17 115.9 9.4 96 120-220 75-183 (233)
156 3gdh_A Trimethylguanosine synt 99.3 2.5E-14 8.5E-19 129.5 -3.9 100 115-218 71-180 (241)
157 1yb2_A Hypothetical protein TA 99.3 1.6E-12 5.6E-17 120.2 8.2 94 119-221 107-213 (275)
158 2frn_A Hypothetical protein PH 99.3 2.1E-12 7.1E-17 119.8 8.9 96 119-222 122-228 (278)
159 1dl5_A Protein-L-isoaspartate 99.3 2.8E-12 9.5E-17 121.1 9.8 94 119-221 72-177 (317)
160 2pwy_A TRNA (adenine-N(1)-)-me 99.3 3.2E-12 1.1E-16 116.4 9.8 95 119-221 93-200 (258)
161 3bwc_A Spermidine synthase; SA 99.3 1.8E-12 6.2E-17 121.7 7.8 99 121-220 94-211 (304)
162 3lec_A NADB-rossmann superfami 99.3 3.2E-12 1.1E-16 114.5 8.9 103 112-219 11-125 (230)
163 2pjd_A Ribosomal RNA small sub 99.3 1.5E-12 5.1E-17 124.3 7.3 99 121-221 195-305 (343)
164 3ntv_A MW1564 protein; rossman 99.3 2.2E-12 7.6E-17 116.2 7.9 97 119-221 68-178 (232)
165 1ws6_A Methyltransferase; stru 99.3 7.3E-13 2.5E-17 112.7 4.5 98 120-222 39-150 (171)
166 1i1n_A Protein-L-isoaspartate 99.3 6.2E-12 2.1E-16 112.4 10.5 94 119-221 74-184 (226)
167 3mb5_A SAM-dependent methyltra 99.3 3.6E-12 1.2E-16 116.1 9.0 95 118-221 89-196 (255)
168 3tfw_A Putative O-methyltransf 99.3 2.3E-12 7.8E-17 117.4 7.6 103 113-221 54-172 (248)
169 2fpo_A Methylase YHHF; structu 99.3 1.8E-12 6.3E-17 114.3 6.5 96 122-221 54-162 (202)
170 2pbf_A Protein-L-isoaspartate 99.3 4.7E-12 1.6E-16 113.3 9.0 99 114-221 71-195 (227)
171 1i9g_A Hypothetical protein RV 99.3 4.4E-12 1.5E-16 117.2 9.1 96 119-222 96-206 (280)
172 2ozv_A Hypothetical protein AT 99.3 7.7E-12 2.6E-16 114.8 10.3 101 119-220 33-171 (260)
173 3dou_A Ribosomal RNA large sub 99.3 1.8E-12 6E-17 113.5 5.4 107 113-223 16-143 (191)
174 2vdv_E TRNA (guanine-N(7)-)-me 99.3 4.8E-12 1.6E-16 115.0 8.5 95 120-219 47-173 (246)
175 3gnl_A Uncharacterized protein 99.3 5E-12 1.7E-16 114.2 8.2 104 111-219 10-125 (244)
176 2gpy_A O-methyltransferase; st 99.3 3.1E-12 1E-16 115.1 6.8 97 119-221 51-162 (233)
177 1o9g_A RRNA methyltransferase; 99.3 7.9E-12 2.7E-16 113.7 9.5 98 122-219 51-214 (250)
178 3opn_A Putative hemolysin; str 99.3 2.3E-12 8E-17 116.2 5.7 93 121-219 36-137 (232)
179 3kr9_A SAM-dependent methyltra 99.3 8E-12 2.7E-16 111.7 8.9 102 112-219 5-119 (225)
180 3c3p_A Methyltransferase; NP_9 99.3 4.8E-12 1.7E-16 111.9 7.3 94 120-220 54-161 (210)
181 1ixk_A Methyltransferase; open 99.3 9.9E-12 3.4E-16 117.2 9.6 107 116-222 112-249 (315)
182 2bm8_A Cephalosporin hydroxyla 99.3 2.2E-12 7.7E-17 116.6 4.7 93 122-220 81-188 (236)
183 2oxt_A Nucleoside-2'-O-methylt 99.3 1.4E-12 4.8E-17 119.9 3.1 98 119-221 71-187 (265)
184 3b3j_A Histone-arginine methyl 99.3 7.9E-12 2.7E-16 124.4 8.7 96 121-219 157-263 (480)
185 1g8a_A Fibrillarin-like PRE-rR 99.3 2.1E-11 7.3E-16 109.0 10.7 94 120-218 71-177 (227)
186 2nyu_A Putative ribosomal RNA 99.3 3.8E-12 1.3E-16 111.0 5.6 104 115-222 15-148 (196)
187 3dr5_A Putative O-methyltransf 99.3 4.2E-12 1.4E-16 113.7 5.9 92 123-220 57-164 (221)
188 2wa2_A Non-structural protein 99.3 1.1E-12 3.8E-17 121.3 1.9 98 119-221 79-195 (276)
189 2h00_A Methyltransferase 10 do 99.2 8E-13 2.8E-17 120.5 0.8 98 122-219 65-192 (254)
190 3bzb_A Uncharacterized protein 99.2 2.1E-11 7.2E-16 113.1 10.5 96 121-219 78-205 (281)
191 3duw_A OMT, O-methyltransferas 99.2 6.1E-12 2.1E-16 112.3 6.5 103 113-221 49-169 (223)
192 1r18_A Protein-L-isoaspartate( 99.2 9.1E-12 3.1E-16 111.6 7.6 99 113-221 74-196 (227)
193 3a27_A TYW2, uncharacterized p 99.2 1.5E-11 5.1E-16 113.6 9.2 99 116-222 113-222 (272)
194 1u2z_A Histone-lysine N-methyl 99.2 1.9E-11 6.4E-16 119.5 9.9 98 119-220 239-360 (433)
195 2igt_A SAM dependent methyltra 99.2 3.6E-12 1.2E-16 121.0 4.7 99 120-221 151-274 (332)
196 2b25_A Hypothetical protein; s 99.2 1.6E-11 5.5E-16 116.7 9.1 96 119-222 102-222 (336)
197 3tr6_A O-methyltransferase; ce 99.2 5.1E-12 1.7E-16 112.8 5.1 103 113-221 55-176 (225)
198 1jg1_A PIMT;, protein-L-isoasp 99.2 1.3E-11 4.6E-16 111.1 7.9 93 119-222 88-192 (235)
199 3tma_A Methyltransferase; thum 99.2 2.2E-11 7.4E-16 116.8 9.1 104 118-221 199-319 (354)
200 1o54_A SAM-dependent O-methylt 99.2 2.2E-11 7.7E-16 112.5 8.8 94 119-221 109-215 (277)
201 2yvl_A TRMI protein, hypotheti 99.2 3.2E-11 1.1E-15 109.0 9.5 95 119-221 88-192 (248)
202 3adn_A Spermidine synthase; am 99.2 2.8E-11 9.7E-16 112.9 9.1 99 121-220 82-199 (294)
203 1ne2_A Hypothetical protein TA 99.2 5.7E-11 2E-15 104.1 10.3 92 120-218 49-145 (200)
204 3r3h_A O-methyltransferase, SA 99.2 1.9E-12 6.4E-17 117.6 0.7 103 113-221 51-172 (242)
205 1sui_A Caffeoyl-COA O-methyltr 99.2 1.2E-11 4.2E-16 112.5 5.4 102 113-220 70-191 (247)
206 4hc4_A Protein arginine N-meth 99.2 1.3E-11 4.6E-16 118.5 5.8 96 121-218 82-188 (376)
207 3ajd_A Putative methyltransfer 99.2 3.3E-11 1.1E-15 111.4 7.9 104 116-222 77-214 (274)
208 3gjy_A Spermidine synthase; AP 99.2 3.3E-11 1.1E-15 113.0 7.4 98 124-221 91-202 (317)
209 2yxl_A PH0851 protein, 450AA l 99.2 1.3E-10 4.6E-15 114.8 11.6 107 117-223 254-393 (450)
210 3cbg_A O-methyltransferase; cy 99.2 3.8E-11 1.3E-15 108.1 6.8 101 115-221 65-184 (232)
211 2hnk_A SAM-dependent O-methylt 99.1 4.1E-11 1.4E-15 108.2 6.6 97 119-221 57-183 (239)
212 2avd_A Catechol-O-methyltransf 99.1 4.6E-11 1.6E-15 106.9 5.9 102 114-221 61-181 (229)
213 3lcv_B Sisomicin-gentamicin re 99.1 1.1E-10 3.9E-15 105.2 8.3 98 119-219 129-236 (281)
214 2xyq_A Putative 2'-O-methyl tr 99.1 1.2E-10 4.1E-15 108.1 8.5 96 119-221 60-173 (290)
215 1xj5_A Spermidine synthase 1; 99.1 1.1E-10 3.9E-15 110.7 8.5 100 120-219 118-235 (334)
216 3frh_A 16S rRNA methylase; met 99.1 1.3E-10 4.5E-15 103.8 8.1 96 120-218 103-205 (253)
217 2p41_A Type II methyltransfera 99.1 2E-11 6.7E-16 114.6 2.5 102 119-223 79-195 (305)
218 1sqg_A SUN protein, FMU protei 99.1 2.7E-10 9.3E-15 111.9 10.7 106 118-223 242-378 (429)
219 3c3y_A Pfomt, O-methyltransfer 99.1 6E-11 2E-15 107.2 5.2 102 113-220 61-182 (237)
220 1uir_A Polyamine aminopropyltr 99.1 8.9E-11 3E-15 110.7 6.4 100 121-220 76-196 (314)
221 2i7c_A Spermidine synthase; tr 99.1 9.9E-11 3.4E-15 108.7 6.0 99 121-220 77-193 (283)
222 2o07_A Spermidine synthase; st 99.1 1.9E-10 6.4E-15 107.9 7.3 101 121-221 94-211 (304)
223 4dmg_A Putative uncharacterize 99.1 2.9E-10 1E-14 110.2 8.9 109 115-223 206-330 (393)
224 2qm3_A Predicted methyltransfe 99.0 4.8E-10 1.6E-14 108.2 10.0 94 121-219 171-278 (373)
225 1iy9_A Spermidine synthase; ro 99.0 1.7E-10 6E-15 106.6 6.6 100 121-220 74-190 (275)
226 2pt6_A Spermidine synthase; tr 99.0 1.2E-10 4.1E-15 110.0 5.4 100 121-221 115-232 (321)
227 1nv8_A HEMK protein; class I a 99.0 4E-10 1.4E-14 104.7 8.7 94 122-219 123-249 (284)
228 1inl_A Spermidine synthase; be 99.0 2.6E-10 9E-15 106.5 7.4 100 121-220 89-206 (296)
229 2frx_A Hypothetical protein YE 99.0 4.1E-10 1.4E-14 111.9 9.1 102 122-223 117-250 (479)
230 2b2c_A Spermidine synthase; be 99.0 1.9E-10 6.4E-15 108.3 6.3 98 121-219 107-222 (314)
231 1zq9_A Probable dimethyladenos 99.0 6.8E-11 2.3E-15 109.9 3.0 94 119-216 25-144 (285)
232 2cmg_A Spermidine synthase; tr 99.0 2.4E-10 8.2E-15 104.8 6.2 88 121-220 71-172 (262)
233 1wy7_A Hypothetical protein PH 99.0 2.1E-09 7.2E-14 94.4 12.1 93 120-219 47-148 (207)
234 3m6w_A RRNA methylase; rRNA me 99.0 3.2E-10 1.1E-14 111.8 7.3 107 117-223 96-233 (464)
235 1wxx_A TT1595, hypothetical pr 99.0 1.7E-10 5.7E-15 111.8 4.9 106 113-222 201-328 (382)
236 1mjf_A Spermidine synthase; sp 99.0 2.1E-10 7.2E-15 106.3 5.0 99 121-220 74-194 (281)
237 2as0_A Hypothetical protein PH 99.0 3E-10 1E-14 110.4 6.0 98 122-222 217-338 (396)
238 3v97_A Ribosomal RNA large sub 99.0 3.8E-10 1.3E-14 117.3 6.5 107 111-220 528-658 (703)
239 2b78_A Hypothetical protein SM 99.0 2.7E-10 9.2E-15 110.4 5.0 102 121-222 211-334 (385)
240 3k6r_A Putative transferase PH 99.0 9.4E-10 3.2E-14 101.4 8.2 96 118-221 121-227 (278)
241 3tm4_A TRNA (guanine N2-)-meth 99.0 1.2E-09 4.3E-14 105.2 9.3 98 120-219 215-329 (373)
242 2f8l_A Hypothetical protein LM 99.0 1.3E-09 4.6E-14 103.8 9.1 101 120-221 128-258 (344)
243 3c0k_A UPF0064 protein YCCW; P 99.0 6E-10 2E-14 108.3 6.6 99 121-222 219-342 (396)
244 3m4x_A NOL1/NOP2/SUN family pr 98.9 9.2E-10 3.2E-14 108.4 6.3 108 116-223 99-238 (456)
245 2yx1_A Hypothetical protein MJ 98.9 2.4E-09 8.2E-14 101.8 8.7 95 118-222 191-294 (336)
246 2h1r_A Dimethyladenosine trans 98.8 7.2E-09 2.5E-13 96.8 9.0 70 119-190 39-117 (299)
247 1yub_A Ermam, rRNA methyltrans 98.8 2.4E-11 8.2E-16 110.4 -7.7 98 119-220 26-146 (245)
248 1qam_A ERMC' methyltransferase 98.8 1.3E-09 4.6E-14 98.8 3.1 66 120-186 28-101 (244)
249 2jjq_A Uncharacterized RNA met 98.8 1.3E-08 4.5E-13 99.6 9.1 92 120-219 288-387 (425)
250 2ih2_A Modification methylase 98.7 1.2E-08 4E-13 99.7 7.2 99 121-222 38-167 (421)
251 3b5i_A S-adenosyl-L-methionine 98.7 3.6E-08 1.2E-12 94.5 8.7 151 123-274 53-292 (374)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.7 5.4E-08 1.9E-12 95.6 10.0 93 120-219 284-389 (433)
253 3gru_A Dimethyladenosine trans 98.7 2.4E-08 8.1E-13 92.9 6.4 72 119-190 47-125 (295)
254 2qfm_A Spermine synthase; sper 98.7 1.9E-08 6.6E-13 95.4 5.8 100 121-220 187-315 (364)
255 2okc_A Type I restriction enzy 98.6 2.7E-08 9.2E-13 98.1 6.7 101 120-221 169-309 (445)
256 2b9e_A NOL1/NOP2/SUN domain fa 98.6 1.6E-07 5.4E-12 88.0 11.5 106 117-223 97-238 (309)
257 3ldu_A Putative methylase; str 98.6 9.8E-08 3.4E-12 92.2 9.5 102 119-221 192-346 (385)
258 3ldg_A Putative uncharacterize 98.6 1.6E-07 5.6E-12 90.5 10.8 103 118-221 190-345 (384)
259 3k0b_A Predicted N6-adenine-sp 98.6 9.8E-08 3.3E-12 92.5 9.2 103 118-221 197-352 (393)
260 3evf_A RNA-directed RNA polyme 98.6 2E-08 6.8E-13 91.1 3.5 104 119-222 71-187 (277)
261 3tqs_A Ribosomal RNA small sub 98.6 1.3E-07 4.5E-12 86.1 8.7 68 119-187 26-104 (255)
262 1m6e_X S-adenosyl-L-methionnin 98.5 9.9E-07 3.4E-11 83.9 13.3 153 121-274 50-274 (359)
263 3fut_A Dimethyladenosine trans 98.5 1.5E-07 5.2E-12 86.4 6.7 74 119-194 44-124 (271)
264 2efj_A 3,7-dimethylxanthine me 98.5 4.2E-07 1.4E-11 87.2 9.1 150 123-274 53-286 (384)
265 3ftd_A Dimethyladenosine trans 98.4 5.6E-07 1.9E-11 81.6 8.1 85 119-208 28-118 (249)
266 2r6z_A UPF0341 protein in RSP 98.4 1.8E-07 6.3E-12 85.3 4.4 73 119-191 80-173 (258)
267 3bt7_A TRNA (uracil-5-)-methyl 98.4 1.5E-07 5.1E-12 90.5 3.8 90 123-221 214-328 (369)
268 2dul_A N(2),N(2)-dimethylguano 98.4 2E-07 6.8E-12 89.8 4.3 91 122-219 47-164 (378)
269 3o4f_A Spermidine synthase; am 98.3 2.3E-06 7.9E-11 79.0 10.0 97 121-221 82-200 (294)
270 3axs_A Probable N(2),N(2)-dime 98.3 4.3E-07 1.5E-11 87.6 4.6 92 121-219 51-158 (392)
271 4auk_A Ribosomal RNA large sub 98.3 1.4E-06 4.6E-11 82.7 7.9 94 120-220 209-307 (375)
272 2ar0_A M.ecoki, type I restric 98.3 4.4E-07 1.5E-11 91.5 4.6 102 120-221 167-314 (541)
273 3uzu_A Ribosomal RNA small sub 98.2 8.3E-07 2.8E-11 81.9 5.5 59 119-177 39-106 (279)
274 1m6y_A S-adenosyl-methyltransf 98.2 8.7E-07 3E-11 82.6 5.6 77 110-187 15-106 (301)
275 3ua3_A Protein arginine N-meth 98.2 8E-07 2.7E-11 90.4 5.2 93 123-216 410-531 (745)
276 3v97_A Ribosomal RNA large sub 98.2 3.4E-06 1.2E-10 87.5 10.0 103 119-221 187-349 (703)
277 1qyr_A KSGA, high level kasuga 98.2 5E-07 1.7E-11 82.1 3.1 70 119-188 18-99 (252)
278 3gcz_A Polyprotein; flavivirus 98.2 3.1E-07 1.1E-11 83.4 1.3 103 119-222 87-204 (282)
279 4gqb_A Protein arginine N-meth 98.2 1.7E-06 5.9E-11 87.9 6.6 91 123-216 358-464 (637)
280 3khk_A Type I restriction-modi 98.1 5.2E-06 1.8E-10 83.6 7.2 98 124-221 246-397 (544)
281 3lkd_A Type I restriction-modi 98.0 4.7E-05 1.6E-09 76.5 13.8 102 121-222 220-361 (542)
282 2k4m_A TR8_protein, UPF0146 pr 98.0 4.6E-06 1.6E-10 68.3 4.7 89 120-224 33-126 (153)
283 3cvo_A Methyltransferase-like 98.0 3.2E-05 1.1E-09 67.5 9.9 91 121-219 29-154 (202)
284 3ll7_A Putative methyltransfer 98.0 2.2E-06 7.5E-11 83.0 2.7 67 120-186 91-170 (410)
285 3eld_A Methyltransferase; flav 98.0 4.4E-06 1.5E-10 76.4 4.5 110 111-222 71-194 (300)
286 2qy6_A UPF0209 protein YFCK; s 97.9 2.4E-06 8.1E-11 77.8 1.5 96 121-217 59-211 (257)
287 2oyr_A UPF0341 protein YHIQ; a 97.9 4.2E-06 1.4E-10 76.2 2.6 91 119-213 83-194 (258)
288 3s1s_A Restriction endonucleas 97.8 4.2E-05 1.4E-09 79.1 9.2 102 121-222 320-468 (878)
289 2px2_A Genome polyprotein [con 97.8 5.7E-06 2E-10 74.0 1.4 102 119-222 70-186 (269)
290 4fzv_A Putative methyltransfer 97.7 4.1E-05 1.4E-09 72.8 7.1 113 113-225 139-290 (359)
291 3c6k_A Spermine synthase; sper 97.7 3.3E-05 1.1E-09 73.6 5.7 99 121-219 204-331 (381)
292 2vz8_A Fatty acid synthase; tr 97.6 3.2E-05 1.1E-09 90.5 3.9 137 121-274 1239-1389(2512)
293 3lkz_A Non-structural protein 97.5 8.5E-05 2.9E-09 67.6 5.5 102 119-223 91-208 (321)
294 2wk1_A NOVP; transferase, O-me 97.3 0.00023 8E-09 65.3 5.3 95 121-220 105-245 (282)
295 3p8z_A Mtase, non-structural p 97.3 0.00021 7E-09 63.1 4.4 102 119-224 75-191 (267)
296 3ufb_A Type I restriction-modi 97.2 0.0018 6.1E-08 64.9 11.1 134 88-221 175-364 (530)
297 1wg8_A Predicted S-adenosylmet 97.1 0.00075 2.6E-08 61.5 6.6 76 110-186 11-96 (285)
298 3r24_A NSP16, 2'-O-methyl tran 97.0 0.00061 2.1E-08 62.0 5.1 108 111-224 94-222 (344)
299 1rjd_A PPM1P, carboxy methyl t 97.0 0.0048 1.6E-07 58.0 11.2 145 121-273 96-281 (334)
300 2zig_A TTHA0409, putative modi 96.5 0.003 1E-07 58.3 5.7 41 121-161 234-276 (297)
301 3vyw_A MNMC2; tRNA wobble urid 95.7 0.012 4.2E-07 54.2 5.5 93 123-216 97-223 (308)
302 2dph_A Formaldehyde dismutase; 95.6 0.026 8.9E-07 54.1 7.7 96 118-219 181-299 (398)
303 2uyo_A Hypothetical protein ML 95.6 0.21 7.1E-06 46.2 13.6 142 124-274 104-273 (310)
304 1kol_A Formaldehyde dehydrogen 95.3 0.039 1.3E-06 52.9 8.0 97 118-219 181-300 (398)
305 3tka_A Ribosomal RNA small sub 94.9 0.02 7E-07 53.4 4.3 51 108-159 44-99 (347)
306 1pqw_A Polyketide synthase; ro 94.6 0.079 2.7E-06 45.2 7.1 90 119-219 35-137 (198)
307 1f8f_A Benzyl alcohol dehydrog 94.5 0.056 1.9E-06 51.2 6.5 91 119-219 187-289 (371)
308 3two_A Mannitol dehydrogenase; 94.0 0.045 1.5E-06 51.4 4.7 90 119-220 173-266 (348)
309 1g60_A Adenine-specific methyl 93.8 0.054 1.8E-06 48.8 4.6 41 121-161 211-253 (260)
310 4ej6_A Putative zinc-binding d 93.8 0.16 5.4E-06 48.1 8.0 92 118-219 178-284 (370)
311 1e3j_A NADP(H)-dependent ketos 93.5 0.24 8.4E-06 46.3 8.8 92 118-219 164-271 (352)
312 3s2e_A Zinc-containing alcohol 93.4 0.13 4.4E-06 48.0 6.7 91 119-219 163-263 (340)
313 1i4w_A Mitochondrial replicati 93.1 0.085 2.9E-06 49.8 4.9 52 122-173 58-117 (353)
314 1pl8_A Human sorbitol dehydrog 93.0 0.11 3.7E-06 48.9 5.6 92 118-219 167-273 (356)
315 3fpc_A NADP-dependent alcohol 93.0 0.21 7E-06 46.8 7.4 93 118-220 162-267 (352)
316 3fwz_A Inner membrane protein 93.0 0.27 9.2E-06 39.4 7.2 90 124-219 8-105 (140)
317 1rjw_A ADH-HT, alcohol dehydro 92.9 0.28 9.7E-06 45.6 8.2 91 119-219 161-261 (339)
318 3goh_A Alcohol dehydrogenase, 92.8 0.059 2E-06 49.8 3.3 86 119-218 139-228 (315)
319 3jv7_A ADH-A; dehydrogenase, n 92.6 0.17 5.9E-06 47.2 6.2 93 119-220 168-271 (345)
320 1v3u_A Leukotriene B4 12- hydr 92.4 0.19 6.7E-06 46.5 6.3 90 119-219 142-244 (333)
321 3uog_A Alcohol dehydrogenase; 92.3 0.13 4.5E-06 48.5 5.1 91 119-220 186-288 (363)
322 4dvj_A Putative zinc-dependent 92.0 0.35 1.2E-05 45.5 7.7 88 122-218 171-269 (363)
323 1uuf_A YAHK, zinc-type alcohol 91.9 0.14 4.8E-06 48.5 4.8 90 119-219 191-288 (369)
324 3iei_A Leucine carboxyl methyl 91.7 2.7 9.3E-05 39.1 13.2 149 115-274 83-275 (334)
325 3c85_A Putative glutathione-re 91.3 0.49 1.7E-05 39.6 7.1 91 123-219 39-139 (183)
326 2hcy_A Alcohol dehydrogenase 1 91.0 0.2 6.7E-06 46.9 4.7 91 119-219 166-269 (347)
327 1cdo_A Alcohol dehydrogenase; 91.0 0.34 1.1E-05 45.8 6.4 91 119-219 189-294 (374)
328 1p0f_A NADP-dependent alcohol 91.0 0.27 9.3E-06 46.4 5.7 91 119-219 188-293 (373)
329 1jvb_A NAD(H)-dependent alcoho 91.0 0.27 9.1E-06 46.0 5.6 92 118-219 166-271 (347)
330 3fbg_A Putative arginate lyase 90.7 0.44 1.5E-05 44.4 6.9 88 122-218 150-247 (346)
331 2b5w_A Glucose dehydrogenase; 90.7 0.58 2E-05 43.8 7.7 89 120-219 164-273 (357)
332 2jhf_A Alcohol dehydrogenase E 90.7 0.36 1.2E-05 45.6 6.3 91 119-219 188-293 (374)
333 2eih_A Alcohol dehydrogenase; 90.7 0.29 9.8E-06 45.7 5.5 90 119-219 163-265 (343)
334 2h6e_A ADH-4, D-arabinose 1-de 90.7 0.15 5.2E-06 47.6 3.6 90 119-219 168-269 (344)
335 1piw_A Hypothetical zinc-type 90.6 0.32 1.1E-05 45.7 5.8 93 118-219 175-276 (360)
336 1e3i_A Alcohol dehydrogenase, 90.5 0.39 1.3E-05 45.3 6.3 92 119-220 192-298 (376)
337 3uko_A Alcohol dehydrogenase c 90.3 0.26 8.7E-06 46.7 4.8 92 119-220 190-296 (378)
338 3ip1_A Alcohol dehydrogenase, 90.3 0.94 3.2E-05 43.2 8.9 93 119-220 210-319 (404)
339 3qwb_A Probable quinone oxidor 90.2 0.45 1.5E-05 44.1 6.3 90 119-219 145-247 (334)
340 2fzw_A Alcohol dehydrogenase c 90.0 0.35 1.2E-05 45.6 5.5 91 119-219 187-292 (373)
341 2cdc_A Glucose dehydrogenase g 90.0 0.37 1.3E-05 45.4 5.7 85 123-220 181-279 (366)
342 1yb5_A Quinone oxidoreductase; 90.0 0.49 1.7E-05 44.3 6.5 90 119-219 167-269 (351)
343 4b7c_A Probable oxidoreductase 89.9 0.43 1.5E-05 44.2 5.9 91 118-219 145-248 (336)
344 2zig_A TTHA0409, putative modi 89.8 0.12 4E-06 47.5 1.9 58 163-220 22-98 (297)
345 3gms_A Putative NADPH:quinone 89.6 0.36 1.2E-05 44.9 5.2 91 119-220 141-244 (340)
346 2j3h_A NADP-dependent oxidored 89.6 0.45 1.6E-05 44.2 5.9 90 119-219 152-255 (345)
347 3jyn_A Quinone oxidoreductase; 89.3 0.37 1.3E-05 44.5 5.0 91 119-220 137-240 (325)
348 4eez_A Alcohol dehydrogenase 1 89.1 1.5 5.1E-05 40.6 9.1 92 118-219 159-263 (348)
349 1vj0_A Alcohol dehydrogenase, 88.9 0.39 1.3E-05 45.5 4.9 90 120-219 193-298 (380)
350 2d8a_A PH0655, probable L-thre 88.8 0.68 2.3E-05 43.1 6.5 90 119-219 165-267 (348)
351 3llv_A Exopolyphosphatase-rela 88.7 1.5 5.1E-05 34.7 7.7 90 123-219 6-103 (141)
352 2c0c_A Zinc binding alcohol de 88.5 1 3.5E-05 42.3 7.5 91 118-219 159-261 (362)
353 3l9w_A Glutathione-regulated p 88.4 0.8 2.7E-05 44.0 6.8 92 123-220 4-103 (413)
354 3m6i_A L-arabinitol 4-dehydrog 88.3 0.91 3.1E-05 42.5 7.1 94 118-220 175-284 (363)
355 3g7u_A Cytosine-specific methy 88.3 0.7 2.4E-05 43.8 6.2 69 124-192 3-84 (376)
356 1qor_A Quinone oxidoreductase; 88.2 0.73 2.5E-05 42.4 6.2 90 119-219 137-239 (327)
357 2oo3_A Protein involved in cat 87.7 0.26 8.7E-06 44.8 2.6 107 113-223 83-202 (283)
358 3gaz_A Alcohol dehydrogenase s 87.6 0.87 3E-05 42.4 6.4 89 119-219 147-246 (343)
359 4eye_A Probable oxidoreductase 86.9 0.54 1.8E-05 43.8 4.4 91 119-219 156-257 (342)
360 3krt_A Crotonyl COA reductase; 86.9 1.2 4E-05 43.3 7.0 90 119-219 225-344 (456)
361 2j8z_A Quinone oxidoreductase; 86.4 1 3.4E-05 42.1 6.1 90 119-219 159-261 (354)
362 1wly_A CAAR, 2-haloacrylate re 86.2 1.3 4.4E-05 40.9 6.7 90 119-219 142-244 (333)
363 1lss_A TRK system potassium up 86.1 3.4 0.00012 32.1 8.3 88 123-217 4-100 (140)
364 4dup_A Quinone oxidoreductase; 85.1 1.3 4.4E-05 41.4 6.1 91 119-220 164-266 (353)
365 3nx4_A Putative oxidoreductase 84.8 0.99 3.4E-05 41.4 5.1 84 125-219 149-241 (324)
366 2g1u_A Hypothetical protein TM 84.7 1.2 4E-05 36.2 5.0 92 121-218 17-117 (155)
367 2py6_A Methyltransferase FKBM; 83.6 1.1 3.7E-05 43.0 4.9 42 120-161 224-271 (409)
368 3ce6_A Adenosylhomocysteinase; 83.5 1.8 6E-05 42.6 6.4 87 120-219 271-361 (494)
369 3pvc_A TRNA 5-methylaminomethy 83.4 1.2 4.1E-05 45.7 5.5 95 122-216 58-208 (689)
370 1iz0_A Quinone oxidoreductase; 83.4 0.55 1.9E-05 42.8 2.6 88 120-219 123-218 (302)
371 3tqh_A Quinone oxidoreductase; 83.4 2.2 7.6E-05 39.1 6.9 89 118-218 148-244 (321)
372 1xa0_A Putative NADPH dependen 82.7 0.68 2.3E-05 42.7 3.0 90 119-219 145-246 (328)
373 2dq4_A L-threonine 3-dehydroge 82.5 0.48 1.6E-05 44.1 1.9 89 119-219 162-262 (343)
374 3tos_A CALS11; methyltransfera 82.5 1.3 4.4E-05 39.6 4.6 94 123-221 70-219 (257)
375 3g0o_A 3-hydroxyisobutyrate de 82.2 2.4 8.3E-05 38.5 6.6 86 123-216 7-99 (303)
376 1boo_A Protein (N-4 cytosine-s 82.2 0.54 1.9E-05 43.6 2.1 58 163-220 15-85 (323)
377 2vn8_A Reticulon-4-interacting 82.1 1.7 5.7E-05 40.9 5.6 90 120-219 181-280 (375)
378 1g55_A DNA cytosine methyltran 81.8 0.55 1.9E-05 43.9 2.1 69 124-192 3-81 (343)
379 4a2c_A Galactitol-1-phosphate 81.8 7 0.00024 35.9 9.7 93 118-220 156-261 (346)
380 1tt7_A YHFP; alcohol dehydroge 81.8 1.1 3.7E-05 41.3 4.0 91 119-219 146-247 (330)
381 2zb4_A Prostaglandin reductase 80.9 4.3 0.00015 37.7 7.9 91 118-219 154-260 (357)
382 3p2y_A Alanine dehydrogenase/p 80.7 0.21 7.3E-06 47.4 -1.2 93 122-217 183-300 (381)
383 3ius_A Uncharacterized conserv 79.7 6.9 0.00024 34.6 8.7 69 124-194 6-78 (286)
384 1boo_A Protein (N-4 cytosine-s 79.5 1.2 4E-05 41.3 3.4 42 120-161 250-293 (323)
385 4a0s_A Octenoyl-COA reductase/ 79.2 2.8 9.6E-05 40.4 6.2 91 118-219 216-336 (447)
386 3ggo_A Prephenate dehydrogenas 78.7 5.1 0.00018 36.7 7.6 85 124-216 34-125 (314)
387 4dio_A NAD(P) transhydrogenase 78.4 0.34 1.2E-05 46.4 -0.6 93 122-217 189-310 (405)
388 2cf5_A Atccad5, CAD, cinnamyl 78.1 0.57 2E-05 43.9 0.8 91 119-219 176-275 (357)
389 3dmg_A Probable ribosomal RNA 78.1 10 0.00035 35.7 9.6 94 122-219 45-139 (381)
390 2hwk_A Helicase NSP2; rossman 77.5 2.9 0.0001 37.7 5.1 93 115-223 157-258 (320)
391 2f1k_A Prephenate dehydrogenas 76.7 5.9 0.0002 35.2 7.2 81 125-215 2-87 (279)
392 2c7p_A Modification methylase 75.9 2 6.7E-05 39.9 3.8 68 123-190 11-82 (327)
393 1yqd_A Sinapyl alcohol dehydro 75.6 1.5 5.2E-05 41.1 3.1 91 119-219 183-282 (366)
394 3qv2_A 5-cytosine DNA methyltr 75.4 2.4 8.3E-05 39.3 4.3 70 123-192 10-89 (327)
395 2zwa_A Leucine carboxyl methyl 75.4 16 0.00056 37.2 11.0 144 122-274 107-303 (695)
396 1l7d_A Nicotinamide nucleotide 75.2 0.6 2.1E-05 44.4 0.1 45 122-166 171-219 (384)
397 1x13_A NAD(P) transhydrogenase 74.5 0.49 1.7E-05 45.3 -0.7 94 122-218 171-291 (401)
398 2vhw_A Alanine dehydrogenase; 74.4 0.64 2.2E-05 44.1 0.0 94 122-218 167-267 (377)
399 2ew2_A 2-dehydropantoate 2-red 73.9 10 0.00036 33.9 8.2 88 124-217 4-106 (316)
400 2km1_A Protein DRE2; yeast, an 73.6 1.7 5.7E-05 34.8 2.3 41 174-217 54-96 (136)
401 1zkd_A DUF185; NESG, RPR58, st 72.5 5.6 0.00019 37.7 6.1 71 121-194 79-164 (387)
402 2g5c_A Prephenate dehydrogenas 72.4 8.5 0.00029 34.2 7.2 85 124-217 2-94 (281)
403 3ps9_A TRNA 5-methylaminomethy 72.1 4.1 0.00014 41.5 5.5 94 123-217 67-217 (676)
404 1id1_A Putative potassium chan 72.0 6.8 0.00023 31.3 5.8 91 123-219 3-105 (153)
405 1h2b_A Alcohol dehydrogenase; 71.6 4.9 0.00017 37.4 5.5 90 118-219 182-285 (359)
406 2aef_A Calcium-gated potassium 71.0 10 0.00034 32.7 7.1 91 122-220 8-106 (234)
407 1pjc_A Protein (L-alanine dehy 70.4 0.89 3.1E-05 42.8 0.0 93 123-218 167-266 (361)
408 3l4b_C TRKA K+ channel protien 70.1 9.5 0.00032 32.5 6.6 88 125-218 2-98 (218)
409 3gqv_A Enoyl reductase; medium 70.0 8.3 0.00028 36.0 6.7 88 121-219 163-263 (371)
410 2qrv_A DNA (cytosine-5)-methyl 69.9 4.8 0.00016 36.7 4.8 67 121-187 14-91 (295)
411 2cvz_A Dehydrogenase, 3-hydrox 69.9 6.5 0.00022 35.0 5.7 81 125-216 3-87 (289)
412 3c24_A Putative oxidoreductase 69.6 8.8 0.0003 34.3 6.6 81 124-215 12-97 (286)
413 2eez_A Alanine dehydrogenase; 69.1 0.94 3.2E-05 42.7 -0.1 93 122-218 165-265 (369)
414 3qha_A Putative oxidoreductase 69.0 5.1 0.00018 36.2 4.9 84 124-217 16-103 (296)
415 3gvp_A Adenosylhomocysteinase 68.4 8.6 0.00029 37.0 6.4 86 120-218 217-306 (435)
416 1eg2_A Modification methylase 67.7 2.3 8E-05 39.2 2.3 42 120-161 240-286 (319)
417 4h0n_A DNMT2; SAH binding, tra 67.6 3.4 0.00012 38.3 3.4 66 124-189 4-79 (333)
418 3b1f_A Putative prephenate deh 66.4 19 0.00066 32.0 8.2 84 124-216 7-98 (290)
419 3d4o_A Dipicolinate synthase s 65.8 6.7 0.00023 35.4 5.0 87 121-218 153-243 (293)
420 1g60_A Adenine-specific methyl 65.4 2.1 7.1E-05 38.1 1.4 56 164-219 6-74 (260)
421 2hmt_A YUAA protein; RCK, KTN, 64.7 9.2 0.00031 29.6 5.1 90 123-218 6-103 (144)
422 3n58_A Adenosylhomocysteinase; 64.5 9.9 0.00034 36.8 6.0 86 120-218 244-333 (464)
423 2rir_A Dipicolinate synthase, 64.1 7.3 0.00025 35.3 4.9 87 121-218 155-245 (300)
424 2h78_A Hibadh, 3-hydroxyisobut 63.4 8.4 0.00029 34.7 5.1 84 124-216 4-94 (302)
425 4e21_A 6-phosphogluconate dehy 63.1 4.6 0.00016 37.9 3.3 88 122-216 21-112 (358)
426 1lnq_A MTHK channels, potassiu 62.8 25 0.00086 32.1 8.4 90 123-220 115-212 (336)
427 4ezb_A Uncharacterized conserv 62.3 17 0.0006 33.0 7.1 81 124-216 25-118 (317)
428 4a27_A Synaptic vesicle membra 62.1 7.9 0.00027 35.8 4.8 90 118-219 138-238 (349)
429 3e8x_A Putative NAD-dependent 60.3 19 0.00065 30.7 6.7 70 122-191 20-96 (236)
430 3ubt_Y Modification methylase 59.3 12 0.0004 34.2 5.4 65 124-188 1-70 (331)
431 4dll_A 2-hydroxy-3-oxopropiona 58.9 10 0.00036 34.6 5.0 87 122-217 30-122 (320)
432 4eso_A Putative oxidoreductase 58.8 13 0.00044 32.5 5.4 97 122-218 7-137 (255)
433 3d1l_A Putative NADP oxidoredu 58.5 14 0.00047 32.5 5.6 85 123-218 10-100 (266)
434 4f3n_A Uncharacterized ACR, CO 58.4 12 0.00041 35.9 5.4 38 123-160 138-184 (432)
435 3hwr_A 2-dehydropantoate 2-red 57.9 22 0.00074 32.3 7.0 90 122-218 18-119 (318)
436 3pi7_A NADH oxidoreductase; gr 57.5 6.8 0.00023 36.2 3.4 85 124-219 166-263 (349)
437 1vpd_A Tartronate semialdehyde 57.3 8.9 0.00031 34.3 4.2 83 124-215 6-95 (299)
438 3h9u_A Adenosylhomocysteinase; 56.7 14 0.00049 35.4 5.6 84 121-217 209-296 (436)
439 1zsy_A Mitochondrial 2-enoyl t 56.3 20 0.00069 33.0 6.5 91 118-218 163-269 (357)
440 1eg2_A Modification methylase 55.5 7 0.00024 36.0 3.1 57 164-220 40-107 (319)
441 3i83_A 2-dehydropantoate 2-red 54.6 25 0.00085 31.9 6.8 87 124-218 3-104 (320)
442 3oj0_A Glutr, glutamyl-tRNA re 53.6 9.8 0.00033 30.0 3.4 83 123-217 21-108 (144)
443 4dcm_A Ribosomal RNA large sub 53.3 46 0.0016 31.0 8.6 93 122-220 38-137 (375)
444 3pef_A 6-phosphogluconate dehy 52.3 7.8 0.00027 34.7 2.9 84 124-216 2-92 (287)
445 1bg6_A N-(1-D-carboxylethyl)-L 51.8 16 0.00055 33.5 5.0 89 124-218 5-108 (359)
446 1wwk_A Phosphoglycerate dehydr 51.2 2.7 9.2E-05 38.5 -0.5 86 122-218 141-231 (307)
447 3ic5_A Putative saccharopine d 50.9 15 0.00051 27.2 3.9 66 122-187 4-77 (118)
448 3ond_A Adenosylhomocysteinase; 50.0 49 0.0017 32.2 8.2 85 121-218 263-351 (488)
449 2g76_A 3-PGDH, D-3-phosphoglyc 49.4 5.7 0.0002 36.8 1.5 86 121-217 163-253 (335)
450 4g65_A TRK system potassium up 49.1 15 0.00053 35.5 4.6 90 123-218 3-101 (461)
451 3doj_A AT3G25530, dehydrogenas 48.3 9.6 0.00033 34.6 2.8 86 122-216 20-112 (310)
452 1ej6_A Lambda2; icosahedral, n 47.7 13 0.00045 39.6 3.8 95 121-218 820-925 (1289)
453 1np3_A Ketol-acid reductoisome 47.6 10 0.00035 35.0 2.9 83 123-216 16-104 (338)
454 1zcj_A Peroxisomal bifunctiona 46.9 74 0.0025 30.6 9.1 87 123-217 37-148 (463)
455 1gu7_A Enoyl-[acyl-carrier-pro 46.7 18 0.00063 33.3 4.6 91 119-219 163-275 (364)
456 4fgs_A Probable dehydrogenase 46.2 29 0.00099 31.0 5.6 97 122-218 28-158 (273)
457 3gg2_A Sugar dehydrogenase, UD 44.8 34 0.0012 32.9 6.2 91 124-217 3-120 (450)
458 4e12_A Diketoreductase; oxidor 43.6 38 0.0013 30.1 6.0 83 124-215 5-117 (283)
459 3d64_A Adenosylhomocysteinase; 43.5 27 0.00093 34.1 5.3 83 121-216 275-361 (494)
460 3tri_A Pyrroline-5-carboxylate 42.7 20 0.00069 32.0 4.0 86 124-220 4-98 (280)
461 3pxx_A Carveol dehydrogenase; 42.6 47 0.0016 29.0 6.5 97 122-218 9-152 (287)
462 1v8b_A Adenosylhomocysteinase; 42.4 18 0.00062 35.2 3.9 84 121-217 255-342 (479)
463 1dlj_A UDP-glucose dehydrogena 42.4 17 0.00057 34.4 3.6 89 125-217 2-115 (402)
464 3hn2_A 2-dehydropantoate 2-red 41.7 19 0.00064 32.6 3.7 86 124-217 3-101 (312)
465 3me5_A Cytosine-specific methy 41.5 23 0.00077 34.6 4.4 69 124-192 89-182 (482)
466 2qyt_A 2-dehydropantoate 2-red 41.1 17 0.00059 32.6 3.3 87 124-217 9-115 (317)
467 1txg_A Glycerol-3-phosphate de 41.0 23 0.00078 32.1 4.2 85 125-216 2-101 (335)
468 3cky_A 2-hydroxymethyl glutara 40.6 25 0.00085 31.3 4.3 85 124-218 5-96 (301)
469 3oig_A Enoyl-[acyl-carrier-pro 40.5 74 0.0025 27.4 7.4 98 122-219 6-147 (266)
470 3jtm_A Formate dehydrogenase, 39.3 5.7 0.00019 37.1 -0.3 84 122-217 163-254 (351)
471 3iht_A S-adenosyl-L-methionine 38.6 15 0.00052 30.0 2.1 27 124-150 42-72 (174)
472 1mv8_A GMD, GDP-mannose 6-dehy 38.2 26 0.0009 33.4 4.3 89 125-216 2-120 (436)
473 2y0c_A BCEC, UDP-glucose dehyd 37.8 33 0.0011 33.3 4.9 95 122-216 7-125 (478)
474 3ghy_A Ketopantoate reductase 37.3 15 0.00052 33.6 2.3 87 124-217 4-102 (335)
475 2ekl_A D-3-phosphoglycerate de 37.0 4.7 0.00016 37.0 -1.3 85 121-216 140-229 (313)
476 3pdu_A 3-hydroxyisobutyrate de 36.8 9.8 0.00034 34.0 0.9 83 125-216 3-92 (287)
477 2w2k_A D-mandelate dehydrogena 36.4 6.4 0.00022 36.7 -0.5 86 121-215 161-252 (348)
478 1wg8_A Predicted S-adenosylmet 36.3 20 0.00067 32.4 2.8 24 198-221 212-235 (285)
479 2gcg_A Glyoxylate reductase/hy 35.9 7.5 0.00025 35.9 -0.1 85 122-216 154-243 (330)
480 2dbq_A Glyoxylate reductase; D 35.9 11 0.00037 34.9 1.0 84 122-216 149-237 (334)
481 3tka_A Ribosomal RNA small sub 35.7 20 0.00069 33.2 2.8 24 198-221 253-276 (347)
482 3iyl_W VP1; non-enveloped viru 35.2 23 0.00078 38.1 3.3 92 123-214 828-926 (1299)
483 3g79_A NDP-N-acetyl-D-galactos 34.6 85 0.0029 30.4 7.2 93 121-217 16-145 (478)
484 3abi_A Putative uncharacterize 34.5 23 0.0008 32.8 3.2 65 122-187 15-85 (365)
485 2nac_A NAD-dependent formate d 34.3 7.1 0.00024 37.1 -0.5 86 122-216 190-280 (393)
486 3qsg_A NAD-binding phosphogluc 34.2 32 0.0011 31.1 4.0 84 123-216 24-114 (312)
487 3gt0_A Pyrroline-5-carboxylate 34.1 16 0.00054 31.8 1.8 85 124-219 3-96 (247)
488 3ktd_A Prephenate dehydrogenas 34.1 12 0.00041 34.7 1.0 82 123-213 8-95 (341)
489 1wma_A Carbonyl reductase [NAD 33.5 64 0.0022 27.7 5.8 97 122-218 3-137 (276)
490 3h2s_A Putative NADH-flavin re 33.2 1.4E+02 0.0047 24.6 7.7 94 125-218 2-103 (224)
491 1gdh_A D-glycerate dehydrogena 33.1 10 0.00036 34.7 0.4 86 121-216 144-235 (320)
492 4gwg_A 6-phosphogluconate dehy 32.9 26 0.00089 34.2 3.2 88 124-216 5-100 (484)
493 3k31_A Enoyl-(acyl-carrier-pro 32.8 45 0.0015 29.7 4.7 98 122-219 29-168 (296)
494 3k96_A Glycerol-3-phosphate de 32.2 53 0.0018 30.4 5.2 86 123-217 29-131 (356)
495 2zyd_A 6-phosphogluconate dehy 31.8 32 0.0011 33.4 3.7 88 123-216 15-110 (480)
496 2iz1_A 6-phosphogluconate dehy 31.6 29 0.001 33.6 3.4 86 124-215 6-99 (474)
497 4e5n_A Thermostable phosphite 31.0 8.5 0.00029 35.6 -0.6 86 122-217 144-234 (330)
498 3trk_A Nonstructural polyprote 30.9 24 0.00082 31.5 2.3 47 177-223 209-263 (324)
499 3ek2_A Enoyl-(acyl-carrier-pro 30.9 1E+02 0.0035 26.5 6.7 99 121-219 12-153 (271)
500 2j6i_A Formate dehydrogenase; 30.2 5.8 0.0002 37.3 -1.9 87 122-217 163-255 (364)
No 1
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=1.5e-23 Score=193.26 Aligned_cols=229 Identities=19% Similarity=0.191 Sum_probs=144.5
Q ss_pred HHHhhCcccccccccchH---HHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-CCeEEE
Q 017080 94 VYDAIAPHFSSTRFAKWP---KVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-GHEVLV 167 (377)
Q Consensus 94 ~y~~~a~~y~~~~~~~~~---~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-~~~~~~ 167 (377)
.|+.++..|+..+..... .+...+ .+.++.+|||||||+|.++.. .++.+|+|+|+|+.|++.++++ ++++++
T Consensus 4 ~y~~~a~~y~~~~~~~~~~~~~l~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~ 82 (261)
T 3ege_A 4 IYNSIGKQYSQTRVPDIRIVNAIINLL-NLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFT 82 (261)
T ss_dssp ---------CCSBCCCHHHHHHHHHHH-CCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEEC
T ss_pred HHHHHHHHHhhcccccHHHHHHHHHHh-CCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEE
Confidence 577788888765543322 222222 346788999999999998643 5788999999999999988776 789999
Q ss_pred eeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCC
Q 017080 168 ADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGP 247 (377)
Q Consensus 168 ~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 247 (377)
+|++++++++++||+|++..+++|+++ +..++++++++|| ||++++.++........+.. .........+
T Consensus 83 ~d~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--- 152 (261)
T 3ege_A 83 GYAENLALPDKSVDGVISILAIHHFSH---LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLY---DYFPFLWEDA--- 152 (261)
T ss_dssp CCTTSCCSCTTCBSEEEEESCGGGCSS---HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGG---GTCHHHHHHH---
T ss_pred CchhhCCCCCCCEeEEEEcchHhhccC---HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHH---HHHHHHhhhh---
Confidence 999999998999999999999999998 8999999999999 99999998764322211111 1111111111
Q ss_pred CCCCcCCCCCCCcccHHhHhhcCCCcc-ccCCcccCCcchhhhhcccccCCCcchhccccccccCccceeEeeeeccccc
Q 017080 248 GSPRVRSPSARTLESIPETEDNGSEEQ-GKEPKQSVPDKLWESISLTSQSEDDSVISQDVKIITNQQEYFVPWHLPYHRA 326 (377)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~~l~~aGF~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (377)
...+.+.+.+. +|+++||++ ......++.+.|..-. ....+..+... .........
T Consensus 153 ------~~~~~~~~~~~-~l~~aGF~~v~~~~~~~p~~~~~~~~-----------~~~~~~~~~~~-----~~~~~~~~~ 209 (261)
T 3ege_A 153 ------LRFLPLDEQIN-LLQENTKRRVEAIPFLLPHDLSDLFA-----------AAAWRRPELYL-----KAEVRAGIS 209 (261)
T ss_dssp ------HTSCCHHHHHH-HHHHHHCSEEEEEECCEETTCSBCCT-----------TTTTTCGGGGG-----SHHHHHTSH
T ss_pred ------hhhCCCHHHHH-HHHHcCCCceeEEEecCCCcCcchhh-----------HHhccCchhhc-----Ccchhcccc
Confidence 13345667788 999999977 4455556666554100 11111111100 000000011
Q ss_pred cccCcchhhhhccccccCCCCCceeEEeee
Q 017080 327 EVSGASACALANGLAKKDDKKGAVVYNRYY 356 (377)
Q Consensus 327 ~~~g~s~~~~~~~l~~~~~~~~~~~~~ry~ 356 (377)
.....+.++++..+++.++++.+..+|.|+
T Consensus 210 ~~~~~~~~e~~~~~~~~~~~l~~~~~h~~~ 239 (261)
T 3ege_A 210 SFALANQDLVEKGLELLTADLNNGEWIRKY 239 (261)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred ceeecCHHHHHHHHHHHHHHHhcCCchhhh
Confidence 122246777888888877777777777765
No 2
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.84 E-value=6.7e-22 Score=184.39 Aligned_cols=227 Identities=14% Similarity=0.071 Sum_probs=151.9
Q ss_pred HhCCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 117 LNSLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 117 l~~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
+..+.++.+|||||||+|.++. ..| +.+|+|+|+|+.+++.++++ +++++++|+.++++ +++||+|++
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 95 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAIC 95 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEE
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEE
Confidence 3456778999999999999753 345 58999999999999999886 57899999999887 569999999
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC-----Ccc-chhhhhccccchHHHHhhhhCCCCCCcCCCCCCC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV-----EQE-DKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSART 259 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~-----~~~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 259 (377)
..+++|+++ +..++++++++|||||++++.++.. ... +......... ...+...+... ..........
T Consensus 96 ~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 169 (284)
T 3gu3_A 96 HAFLLHMTT---PETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQ-LGVLQKLFESD--TQRNGKDGNI 169 (284)
T ss_dssp ESCGGGCSS---HHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCC-HHHHHHHHHHH--HHHTCCCTTG
T ss_pred CChhhcCCC---HHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccc-hHHHHHHHHHH--hhhhcccccH
Confidence 999999999 8899999999999999999998761 100 0000000000 00111101000 0011234556
Q ss_pred cccHHhHhhcCCCcc-cc----CCcccCCcchhhhhcccccCCCcchhccccccccCccceeE-eeeeccccccccCcch
Q 017080 260 LESIPETEDNGSEEQ-GK----EPKQSVPDKLWESISLTSQSEDDSVISQDVKIITNQQEYFV-PWHLPYHRAEVSGASA 333 (377)
Q Consensus 260 ~~~l~~~l~~aGF~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~ 333 (377)
.+++.++|+++||++ .. ....++.+.|+... ..+...+++.+-.....-+ .+. ......||+.
T Consensus 170 ~~~l~~~l~~aGF~~v~~~~~~~~~~~~~~~~~~d~--------~~l~~~l~~~G~~~~~~~~~~~~---~~l~~~g~~~ 238 (284)
T 3gu3_A 170 GMKIPIYLSELGVKNIECRVSDKVNFLDSNMHHNDK--------NDLYQSLKEEGIAGDPGDKQQFV---ERLIARGLTY 238 (284)
T ss_dssp GGTHHHHHHHTTCEEEEEEECCCCEEECTTCCSHHH--------HHHHHHHHHTTTTCCCCCHHHHH---HHHHTTTCCH
T ss_pred HHHHHHHHHHcCCCeEEEEEcCCccccCCCCChHHH--------HHHHHHHHhccccCCcccHHHHH---HHHHHccccH
Confidence 678999999999988 33 56677777776621 0011133333322211000 111 1112348999
Q ss_pred hhhhccccccCCCCCceeEEeeeecccc
Q 017080 334 CALANGLAKKDDKKGAVVYNRYYHVFCD 361 (377)
Q Consensus 334 ~~~~~~l~~~~~~~~~~~~~ry~~~~~~ 361 (377)
++++..+++.+++.++...|.||.++..
T Consensus 239 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (284)
T 3gu3_A 239 DNALAQYEAELRFFKALHLHSSLVYAPN 266 (284)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhcCc
Confidence 9999999999999999999998887653
No 3
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=7.4e-21 Score=172.53 Aligned_cols=178 Identities=9% Similarity=0.076 Sum_probs=116.1
Q ss_pred HHHHHHHHHhhCcccccc--cccchHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--
Q 017080 88 KKYVHRVYDAIAPHFSST--RFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-- 161 (377)
Q Consensus 88 ~~~~~~~y~~~a~~y~~~--~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-- 161 (377)
+.+..++|+..+..|+.. ....+..+...+....++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~ 85 (250)
T 2p7i_A 6 RNYDQEIKDTAGHKYAYNFDFDVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLK 85 (250)
T ss_dssp -----------------CHHHHTHHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSC
T ss_pred CCCCHHHHhhHHHHhcCccchhhHHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhh
Confidence 334455666666665431 1123344556666556778999999999997642 3455899999999999999987
Q ss_pred -CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHH-HccccCcEEEEEEcCCCccchhhhhccccchHH
Q 017080 162 -GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELV-RVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQK 239 (377)
Q Consensus 162 -~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~-r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 239 (377)
+++++++|+.++ +++++||+|++..+++|+++ +..+|+++. ++|||||++++.+++.......... + ..
T Consensus 86 ~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~-~----~~ 156 (250)
T 2p7i_A 86 DGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDD---PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAV-K----MG 156 (250)
T ss_dssp SCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSS---HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHH-H----TT
T ss_pred CCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcC---HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHH-H----cC
Confidence 688999999887 46889999999999999999 889999999 9999999999998765432111100 0 00
Q ss_pred HHhhhhCCC--CCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 240 YVEEWIGPG--SPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 240 ~~~~w~~~~--~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
+...+.... .....+...++.+++.++++++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 157 IISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp SSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred ccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 000000000 00122345788999999999999977
No 4
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.84 E-value=5.7e-21 Score=170.14 Aligned_cols=184 Identities=15% Similarity=0.016 Sum_probs=130.0
Q ss_pred hHHHHHHHHHhhCccccccc----ccchHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHH
Q 017080 87 EKKYVHRVYDAIAPHFSSTR----FAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVD 160 (377)
Q Consensus 87 ~~~~~~~~y~~~a~~y~~~~----~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~ 160 (377)
..+...++|+..+..|+... ......+...+..++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.+++
T Consensus 7 ~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 7 LIESQLSYYRARASEYDATFVPYMDSAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHHHHHHHGGGHHHHHHHHHTTTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh
Confidence 34556778888888887521 223456677777788888999999999997642 236799999999999999987
Q ss_pred c---CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccch
Q 017080 161 R---GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLT 237 (377)
Q Consensus 161 ~---~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (377)
. +++++.+|+.++ +++++||+|++..+++|+++++ ...+|+++.++|||||.+++.+++....... ..+....
T Consensus 87 ~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~ 162 (218)
T 3ou2_A 87 HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDR-FEAFWESVRSAVAPGGVVEFVDVTDHERRLE--QQDDSEP 162 (218)
T ss_dssp GCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEECCCC-------------
T ss_pred cCCCCeEEEecccccC-CCCCceeEEEEechhhcCCHHH-HHHHHHHHHHHcCCCeEEEEEeCCCCccccc--hhhhccc
Confidence 6 488999999988 7789999999999999999843 5899999999999999999998775321100 0000000
Q ss_pred HHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 238 QKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 238 ~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
......+............+++.+++.++++++||++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 199 (218)
T 3ou2_A 163 EVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSC 199 (218)
T ss_dssp -CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred ccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEE
Confidence 0000111110000001244678899999999999965
No 5
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=7.2e-21 Score=174.88 Aligned_cols=128 Identities=19% Similarity=0.206 Sum_probs=97.5
Q ss_pred HHHHHhhCcccccccccchHHHHHHHhC-CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-CCeEEE
Q 017080 92 HRVYDAIAPHFSSTRFAKWPKVATFLNS-LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-GHEVLV 167 (377)
Q Consensus 92 ~~~y~~~a~~y~~~~~~~~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-~~~~~~ 167 (377)
++.|+..+..|+..|...-..+.+.+.. .+.+.+|||||||+|.++.. ..+.+|+|+|+|+.|++.|+++ ++.+++
T Consensus 8 ~d~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~ 87 (257)
T 4hg2_A 8 KDHFTPVADAYRAFRPRYPRALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAV 87 (257)
T ss_dssp ------------CCCCCCCHHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeeh
Confidence 5567888888887765555566665543 34567999999999998653 4567999999999999998776 799999
Q ss_pred eeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 168 ADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 168 ~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
+|++++++++++||+|++..++||+ + +.+++++++|+|||||.|++..+...
T Consensus 88 ~~~e~~~~~~~sfD~v~~~~~~h~~-~---~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 88 APAEDTGLPPASVDVAIAAQAMHWF-D---LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCTTCCCCCSSCEEEEEECSCCTTC-C---HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hhhhhhcccCCcccEEEEeeehhHh-h---HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999999999999999999999887 4 67899999999999999999887644
No 6
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=8.8e-21 Score=168.61 Aligned_cols=162 Identities=22% Similarity=0.230 Sum_probs=129.5
Q ss_pred HHHHHHHHhhCcccccccccchHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-CCeE
Q 017080 89 KYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-GHEV 165 (377)
Q Consensus 89 ~~~~~~y~~~a~~y~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-~~~~ 165 (377)
+...++|+..+..|+..... .+.+..++..++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++.+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 89 (211)
T 3e23_A 11 DDTLRFYRGNATAYAERQPR-SATLTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPV 89 (211)
T ss_dssp HHHHHHHHHSHHHHTTCCCC-CHHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHhhccch-hHHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCce
Confidence 44567788777777764433 556677777888899999999999997643 3367999999999999999998 8999
Q ss_pred EEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhh
Q 017080 166 LVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWI 245 (377)
Q Consensus 166 ~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 245 (377)
..+|+..++ ++++||+|++..+++|++.++ +..+|+++.++|||||.+++..+........
T Consensus 90 ~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~----------------- 150 (211)
T 3e23_A 90 RTMLFHQLD-AIDAYDAVWAHACLLHVPRDE-LADVLKLIWRALKPGGLFYASYKSGEGEGRD----------------- 150 (211)
T ss_dssp EECCGGGCC-CCSCEEEEEECSCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEECCSSCEEC-----------------
T ss_pred EEeeeccCC-CCCcEEEEEecCchhhcCHHH-HHHHHHHHHHhcCCCcEEEEEEcCCCccccc-----------------
Confidence 999999988 789999999999999998433 8899999999999999999997654322110
Q ss_pred CCCCCCcCCCCCCCcccHHhHhhcCC-Ccc
Q 017080 246 GPGSPRVRSPSARTLESIPETEDNGS-EEQ 274 (377)
Q Consensus 246 ~~~~~~~~~~~~~~~~~l~~~l~~aG-F~~ 274 (377)
........++.+++.++++++| |++
T Consensus 151 ----~~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 151 ----KLARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp ----TTSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred ----ccchhccCCCHHHHHHHHHhCCCcEE
Confidence 0111235678899999999999 966
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.83 E-value=2.1e-20 Score=169.46 Aligned_cols=171 Identities=19% Similarity=0.278 Sum_probs=116.4
Q ss_pred HHHHHHHhhCcccccccccch-----HHHHHHH-hCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc
Q 017080 90 YVHRVYDAIAPHFSSTRFAKW-----PKVATFL-NSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 90 ~~~~~y~~~a~~y~~~~~~~~-----~~~~~~l-~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
...++|+..+..|+......| ..+...+ ..++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 94 (242)
T 3l8d_A 15 SAEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKER 94 (242)
T ss_dssp -----------------CHHHHTSTTTTHHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTT
T ss_pred HHHHHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhh
Confidence 445666666666654322211 1233333 3467889999999999997642 3377999999999999999987
Q ss_pred ----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccch
Q 017080 162 ----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLT 237 (377)
Q Consensus 162 ----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (377)
++.++++|+.++++++++||+|++..+++|+++ +..+++++.++|||||.+++.++........ .
T Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~--~------ 163 (242)
T 3l8d_A 95 GEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEE---PLRALNEIKRVLKSDGYACIAILGPTAKPRE--N------ 163 (242)
T ss_dssp TCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSC---HHHHHHHHHHHEEEEEEEEEEEECTTCGGGG--G------
T ss_pred cccCCceEEEcchhcCCCCCCCccEEEEcChHhhccC---HHHHHHHHHHHhCCCeEEEEEEcCCcchhhh--h------
Confidence 688999999999988999999999999999998 8899999999999999999998764432111 0
Q ss_pred HHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCccccC
Q 017080 238 QKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQGKE 277 (377)
Q Consensus 238 ~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~~~~ 277 (377)
.+.. ++. ...+...++.+++.++++++||++.+.
T Consensus 164 -~~~~-~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 164 -SYPR-LYG----KDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp -GGGG-GGT----CCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred -hhhh-hcc----ccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 1111 111 122355678889999999999988433
No 8
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=2.1e-20 Score=172.27 Aligned_cols=151 Identities=14% Similarity=0.207 Sum_probs=107.0
Q ss_pred CCCCCEEEEECCccCccc----cc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 120 LPSGSLVLDAGCGNGKYL----GL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~----~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
++++.+|||||||+|.++ +. .++++|+|+|+|+.|++.|+++ +++++++|+.++|+ ++||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--ccccccee
Confidence 678999999999999864 22 4788999999999999999886 57899999999875 46999999
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHH-hhhhCCCCC------CcCCCCCC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYV-EEWIGPGSP------RVRSPSAR 258 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~------~~~~~~~~ 258 (377)
..+++|+++.+ +..+|++++++|||||.+++.+......... ...+...+..+. ..++..... .......+
T Consensus 146 ~~~l~~~~~~~-~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 146 NFTLQFLEPSE-RQALLDKIYQGLNPGGALVLSEKFSFEDAKV-GELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp ESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEEBCCSSHHH-HHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeeeecCchh-HhHHHHHHHHHcCCCcEEEEEeccCCCCHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 99999998755 6789999999999999999998654322111 000000000000 000000000 00113356
Q ss_pred CcccHHhHhhcCCCcc
Q 017080 259 TLESIPETEDNGSEEQ 274 (377)
Q Consensus 259 ~~~~l~~~l~~aGF~~ 274 (377)
+.+++.++|+++||+.
T Consensus 224 s~~~~~~~L~~AGF~~ 239 (261)
T 4gek_A 224 SVETHKARLHKAGFEH 239 (261)
T ss_dssp CHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHcCCCe
Confidence 7888999999999954
No 9
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.83 E-value=4.9e-21 Score=169.10 Aligned_cols=163 Identities=12% Similarity=0.123 Sum_probs=124.7
Q ss_pred HHHHHHHhhCccccccc------ccchHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc
Q 017080 90 YVHRVYDAIAPHFSSTR------FAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 90 ~~~~~y~~~a~~y~~~~------~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
.+.++|+..+..|+... ...+..+...+... .+.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++
T Consensus 4 ~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~ 82 (203)
T 3h2b_A 4 DVSKAYSSPTFDAEALLGTVISAEDPDRVLIEPWATG-VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT 82 (203)
T ss_dssp HHHHHHHCTTTCHHHHTCSSCCTTCTTHHHHHHHHHH-CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHhhhhccccHHHHHHHHHHhcc-CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh
Confidence 46778888888886421 12234333333322 278999999999997642 3367999999999999999987
Q ss_pred --CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHH
Q 017080 162 --GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQK 239 (377)
Q Consensus 162 --~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 239 (377)
++.++++|+.++++++++||+|++..+++|++.++ +..+|+++.++|||||.+++.++...... .
T Consensus 83 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~-----~------- 149 (203)
T 3h2b_A 83 HPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE-LPDALVALRMAVEDGGGLLMSFFSGPSLE-----P------- 149 (203)
T ss_dssp CTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT-HHHHHHHHHHTEEEEEEEEEEEECCSSCE-----E-------
T ss_pred CCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH-HHHHHHHHHHHcCCCcEEEEEEccCCchh-----h-------
Confidence 79999999999988899999999999999998333 89999999999999999999987654310 0
Q ss_pred HHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 240 YVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 240 ~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
+ .........++.+++.++++++||++
T Consensus 150 ----~----~~~~~~~~~~~~~~~~~~l~~~Gf~~ 176 (203)
T 3h2b_A 150 ----M----YHPVATAYRWPLPELAQALETAGFQV 176 (203)
T ss_dssp ----E----CCSSSCEEECCHHHHHHHHHHTTEEE
T ss_pred ----h----hchhhhhccCCHHHHHHHHHHCCCcE
Confidence 0 01112234578899999999999977
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.82 E-value=2.7e-20 Score=168.08 Aligned_cols=158 Identities=16% Similarity=0.206 Sum_probs=115.0
Q ss_pred HHHHHHHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCCCcee
Q 017080 111 PKVATFLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRSDFGD 181 (377)
Q Consensus 111 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD 181 (377)
..+...+....++.+|||||||+|.++. ..|+.+++|+|+|+.+++.++++ ++.++++|+.+++++ ++||
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCce
Confidence 3444444445678899999999999753 36789999999999999999987 688999999998876 8999
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhh---hhccc------cchHHHHhhhhCCCCCCc
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSL---VTKWT------PLTQKYVEEWIGPGSPRV 252 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~---~~~~~------~~~~~~~~~w~~~~~~~~ 252 (377)
+|++..+++|+++.+ ...++++++++|||||.+++.++......... ...|. .........+ ....
T Consensus 112 ~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 186 (234)
T 3dtn_A 112 MVVSALSIHHLEDED-KKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAG----YERS 186 (234)
T ss_dssp EEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTT----C---
T ss_pred EEEEeCccccCCHHH-HHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHH----HHhc
Confidence 999999999998743 45799999999999999999987654321110 00010 0001111111 1122
Q ss_pred CCCCCCCcccHHhHhhcCCCcc
Q 017080 253 RSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 253 ~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
.....++.+++.++|+++||++
T Consensus 187 ~~~~~~~~~~~~~ll~~aGF~~ 208 (234)
T 3dtn_A 187 KLDKDIEMNQQLNWLKEAGFRD 208 (234)
T ss_dssp -CCCCCBHHHHHHHHHHTTCEE
T ss_pred ccccccCHHHHHHHHHHcCCCc
Confidence 4456778899999999999966
No 11
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.81 E-value=1.2e-20 Score=168.71 Aligned_cols=175 Identities=15% Similarity=0.177 Sum_probs=111.9
Q ss_pred HHHHHhhCccccccc----------ccchHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHH
Q 017080 92 HRVYDAIAPHFSSTR----------FAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICV 159 (377)
Q Consensus 92 ~~~y~~~a~~y~~~~----------~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~ 159 (377)
.++|+.++..|+... ...+..+...+.. .++.+|||||||+|.++.. ..+.+++|+|+|+.+++.++
T Consensus 6 ~~~f~~~a~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~ 84 (220)
T 3hnr_A 6 NGLFDEWAHTYDSFVQGEDIQYKEVFAHYEDILEDVVN-KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAK 84 (220)
T ss_dssp ------------------CCTTTTTTTTHHHHHHHHHH-TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHhHHHHHHHHHHHHHHhhc-cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 345666666666421 1223344444432 3678999999999997642 33779999999999999999
Q ss_pred Hc---CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccc
Q 017080 160 DR---GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPL 236 (377)
Q Consensus 160 ~~---~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 236 (377)
++ +++++.+|+.+++++ ++||+|++..+++|+++.+ ...+|+++.++|||||.+++.++......... . .
T Consensus 85 ~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~----~ 157 (220)
T 3hnr_A 85 EKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDE-KNVAIAKYSQLLNKGGKIVFADTIFADQDAYD-K----T 157 (220)
T ss_dssp HHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHH-HHHHHHHHHHHSCTTCEEEEEEECBSSHHHHH-H----H
T ss_pred HhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCChHH-HHHHHHHHHHhcCCCCEEEEEeccccChHHHH-H----H
Confidence 87 789999999999887 9999999999999999833 34499999999999999999986644321110 0 0
Q ss_pred hHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 237 TQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 237 ~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
...+....+...........+++.+++.++++++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 158 VEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp HHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred HHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 00000000000000001123457889999999999965
No 12
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.81 E-value=1.2e-20 Score=171.30 Aligned_cols=144 Identities=19% Similarity=0.283 Sum_probs=113.9
Q ss_pred HHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC--CCCCCceeEEEecc
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL--PYRSDFGDAAISIA 187 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~--~~~~~~fD~V~~~~ 187 (377)
.+..++..++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++++.+|+.++ ++++++||+|++..
T Consensus 31 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~~~~fD~i~~~~ 109 (240)
T 3dli_A 31 RLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLPDKYLDGVMISH 109 (240)
T ss_dssp HHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSCTTCBSEEEEES
T ss_pred HHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-cceeeccHHHHhhhcCCCCeeEEEECC
Confidence 3444455567889999999999998642 2367899999999999999988 99999998875 78889999999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
+++|+++++ ...+++++.++|||||++++.+++..... .....|. ...+...++.+++.+++
T Consensus 110 ~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------------~~~~~~~-----~~~~~~~~~~~~l~~~l 171 (240)
T 3dli_A 110 FVEHLDPER-LFELLSLCYSKMKYSSYIVIESPNPTSLY------------SLINFYI-----DPTHKKPVHPETLKFIL 171 (240)
T ss_dssp CGGGSCGGG-HHHHHHHHHHHBCTTCCEEEEEECTTSHH------------HHHHHTT-----STTCCSCCCHHHHHHHH
T ss_pred chhhCCcHH-HHHHHHHHHHHcCCCcEEEEEeCCcchhH------------HHHHHhc-----CccccccCCHHHHHHHH
Confidence 999999633 68999999999999999999987643211 1111121 12345667889999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 172 ~~aGf~~ 178 (240)
T 3dli_A 172 EYLGFRD 178 (240)
T ss_dssp HHHTCEE
T ss_pred HHCCCeE
Confidence 9999976
No 13
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.80 E-value=5.1e-20 Score=171.42 Aligned_cols=157 Identities=14% Similarity=0.115 Sum_probs=113.0
Q ss_pred HHHHHhCC-CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCC-CCCCce
Q 017080 113 VATFLNSL-PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLP-YRSDFG 180 (377)
Q Consensus 113 ~~~~l~~~-~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~-~~~~~f 180 (377)
+..++..+ .++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+.+++ +.+++|
T Consensus 58 l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 58 LDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 44444433 3467999999999997642 2378999999999999999875 4779999999987 778999
Q ss_pred eEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCc
Q 017080 181 DAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTL 260 (377)
Q Consensus 181 D~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 260 (377)
|+|++..+++|+++ +..+|+++.++|||||.+++.+++........ ......................+..+++.
T Consensus 138 D~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 4htf_A 138 DLILFHAVLEWVAD---PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHN--MVAGNFDYVQAGMPKKKKRTLSPDYPRDP 212 (285)
T ss_dssp EEEEEESCGGGCSC---HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHH--HHTTCHHHHHTTCCCC----CCCSCCBCH
T ss_pred eEEEECchhhcccC---HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHH--HHhcCHHHHhhhccccccccCCCCCCCCH
Confidence 99999999999999 88999999999999999999987643211110 00000011111111111112233567888
Q ss_pred ccHHhHhhcCCCcc
Q 017080 261 ESIPETEDNGSEEQ 274 (377)
Q Consensus 261 ~~l~~~l~~aGF~~ 274 (377)
+++.++++++||++
T Consensus 213 ~~l~~~l~~aGf~v 226 (285)
T 4htf_A 213 TQVYLWLEEAGWQI 226 (285)
T ss_dssp HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCce
Confidence 99999999999987
No 14
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.80 E-value=1.9e-19 Score=161.07 Aligned_cols=144 Identities=20% Similarity=0.221 Sum_probs=111.4
Q ss_pred HHhCCCCCCEEEEECCccCcccccCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYLGLNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.+..+.++.+|||||||+|.++...... +|+|+|+.+++.++++++.+..+|+.++++++++||+|++..+++|+++
T Consensus 41 ~l~~~~~~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~- 117 (219)
T 1vlm_A 41 AVKCLLPEGRGVEIGVGTGRFAVPLKIK--IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDD- 117 (219)
T ss_dssp HHHHHCCSSCEEEETCTTSTTHHHHTCC--EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSC-
T ss_pred HHHHhCCCCcEEEeCCCCCHHHHHHHHH--hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccC-
Confidence 3433344889999999999986532222 9999999999999998999999999999888899999999999999998
Q ss_pred HHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCccc
Q 017080 196 SRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQG 275 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~~ 275 (377)
+..+|+++.++|+|||.+++.++......... .... ............++.+++.++|+++||++.
T Consensus 118 --~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 118 --PERALKEAYRILKKGGYLIVGIVDRESFLGRE-----------YEKN-KEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHH-----------HHHT-TTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred --HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHH-----------HHHH-hcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 88999999999999999999987653221111 1101 111122234567889999999999999773
Q ss_pred c
Q 017080 276 K 276 (377)
Q Consensus 276 ~ 276 (377)
+
T Consensus 184 ~ 184 (219)
T 1vlm_A 184 K 184 (219)
T ss_dssp E
T ss_pred E
Confidence 3
No 15
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.80 E-value=3.1e-19 Score=158.47 Aligned_cols=134 Identities=18% Similarity=0.225 Sum_probs=108.0
Q ss_pred CCCCEEEEECCccCcccccCCCc-eEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 121 PSGSLVLDAGCGNGKYLGLNPDC-FFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~~~~~-~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
.++.+|||||||+|.++... +. +++|+|+|+.+++.++++ ++.++++|+.++++++++||+|++..+++|+++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--- 110 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED--- 110 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC---
T ss_pred CCCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC---
Confidence 47889999999999987655 66 999999999999999987 799999999999988999999999999999998
Q ss_pred HHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCC
Q 017080 198 RKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGS 271 (377)
Q Consensus 198 ~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aG 271 (377)
+..+++++.++|||||.+++.+++........ .... . ........+..+++.+++.++++ |
T Consensus 111 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-------~~~~---~-~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 111 VERVLLEARRVLRPGGALVVGVLEALSPWAAL-------YRRL---G-EKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECTTSHHHHH-------HHHH---H-HTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred HHHHHHHHHHHcCCCCEEEEEecCCcCcHHHH-------HHHH---h-hccCccccccccCCHHHHHHHhc--C
Confidence 88999999999999999999988754321111 0000 0 11122233466789999999998 7
No 16
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.80 E-value=5.7e-20 Score=163.46 Aligned_cols=145 Identities=17% Similarity=0.246 Sum_probs=108.0
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.+++ +|||||||+|.++.. .++.+|+|+|+|+.+++.++++ +++++++|+.++++++++||+|++..+
T Consensus 42 ~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 42 ITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS 120 (219)
T ss_dssp CCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred CCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECch
Confidence 4445 999999999997532 3678999999999999999887 578999999999998999999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhh
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETED 268 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~ 268 (377)
++|+++ +..+++++.++|||||.+++.+............. ........|... .......++.+++.++|+
T Consensus 121 l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~ 191 (219)
T 3dlc_A 121 VFFWED---VATAFREIYRILKSGGKTYIGGGFGNKELRDSISA---EMIRKNPDWKEF---NRKNISQENVERFQNVLD 191 (219)
T ss_dssp GGGCSC---HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHH---HHHHHCTTHHHH---HHHHSSHHHHHHHHHHHH
T ss_pred HhhccC---HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHH---HHHHhHHHHHhh---hhhccccCCHHHHHHHHH
Confidence 999988 88999999999999999999876544322111100 000001111110 001133457789999999
Q ss_pred cCCCcc
Q 017080 269 NGSEEQ 274 (377)
Q Consensus 269 ~aGF~~ 274 (377)
++||++
T Consensus 192 ~aGf~~ 197 (219)
T 3dlc_A 192 EIGISS 197 (219)
T ss_dssp HHTCSS
T ss_pred HcCCCe
Confidence 999955
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.79 E-value=4.8e-19 Score=165.72 Aligned_cols=139 Identities=17% Similarity=0.086 Sum_probs=109.7
Q ss_pred CCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+.++|+++++||+|++..
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 567889999999999997642 2257999999999999998875 47899999999999999999999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
+++|+++ +..+|++++++|||||.+++.++........ .....+...+.. ....+.+++.+++
T Consensus 159 ~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~------~~~~~~~~~~~~--------~~~~~~~~~~~~l 221 (297)
T 2o57_A 159 AFLHSPD---KLKVFQECARVLKPRGVMAITDPMKEDGIDK------SSIQPILDRIKL--------HDMGSLGLYRSLA 221 (297)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTCCG------GGGHHHHHHHTC--------SSCCCHHHHHHHH
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCeEEEEEEeccCCCCch------HHHHHHHHHhcC--------CCCCCHHHHHHHH
Confidence 9999999 8999999999999999999998764322110 011122222211 2345778999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 222 ~~aGf~~ 228 (297)
T 2o57_A 222 KECGLVT 228 (297)
T ss_dssp HHTTEEE
T ss_pred HHCCCeE
Confidence 9999976
No 18
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=1.9e-19 Score=165.27 Aligned_cols=150 Identities=19% Similarity=0.203 Sum_probs=112.1
Q ss_pred hHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCce
Q 017080 110 WPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFG 180 (377)
Q Consensus 110 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~f 180 (377)
...+...+. +.++.+|||||||+|.++.. ....+|+|+|+|+.|++.++++ ++.+.++|++++|+++++|
T Consensus 26 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 26 LAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 344555543 45788999999999997532 2235999999999999998875 4789999999999999999
Q ss_pred eEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCc
Q 017080 181 DAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTL 260 (377)
Q Consensus 181 D~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 260 (377)
|+|++..+++|+++ +..+|++++++|||||++++.++..... .....+. .....+.. ......++.
T Consensus 105 D~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~~~~~~~~~~--~~~~~~~----~~~~~~~~-----~~~~~~~~~ 170 (260)
T 1vl5_A 105 HIVTCRIAAHHFPN---PASFVSEAYRVLKKGGQLLLVDNSAPEN--DAFDVFY----NYVEKERD-----YSHHRAWKK 170 (260)
T ss_dssp EEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEBCSS--HHHHHHH----HHHHHHHC-----TTCCCCCBH
T ss_pred EEEEEhhhhHhcCC---HHHHHHHHHHHcCCCCEEEEEEcCCCCC--HHHHHHH----HHHHHhcC-----ccccCCCCH
Confidence 99999999999999 8899999999999999999987654322 1111111 11111111 122456788
Q ss_pred ccHHhHhhcCCCcc
Q 017080 261 ESIPETEDNGSEEQ 274 (377)
Q Consensus 261 ~~l~~~l~~aGF~~ 274 (377)
+++.++|+++||.+
T Consensus 171 ~~~~~~l~~aGf~~ 184 (260)
T 1vl5_A 171 SDWLKMLEEAGFEL 184 (260)
T ss_dssp HHHHHHHHHHTCEE
T ss_pred HHHHHHHHHCCCeE
Confidence 89999999999987
No 19
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=6.2e-19 Score=161.31 Aligned_cols=145 Identities=16% Similarity=0.168 Sum_probs=110.1
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEeccchhhcC
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIAVLHHLS 193 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~ 193 (377)
+.++.+|||||||+|.++. ..|+.+|+|+|+|+.|++.++++ ++.+.++|+.+++ ++++||+|++..+++|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 109 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVP 109 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGST
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCC
Confidence 3567899999999999753 25688999999999999999886 7999999999988 788999999999999999
Q ss_pred ChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHh--hhhCCCCCC-cCCCCCCCcccHHhHhhcC
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVE--EWIGPGSPR-VRSPSARTLESIPETEDNG 270 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~--~w~~~~~~~-~~~~~~~~~~~l~~~l~~a 270 (377)
+ +..+|++++++|||||.+++.++......... ....... .|....... .....+++.+++.++|+++
T Consensus 110 ~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 180 (259)
T 2p35_A 110 D---HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHI------AMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPK 180 (259)
T ss_dssp T---HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHH------HHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGG
T ss_pred C---HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHH------HHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhc
Confidence 8 88999999999999999999987543211100 0111111 132211111 1245678889999999999
Q ss_pred CCcc
Q 017080 271 SEEQ 274 (377)
Q Consensus 271 GF~~ 274 (377)
||.+
T Consensus 181 Gf~v 184 (259)
T 2p35_A 181 SSRV 184 (259)
T ss_dssp EEEE
T ss_pred CCce
Confidence 9965
No 20
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=5.4e-19 Score=163.18 Aligned_cols=142 Identities=25% Similarity=0.324 Sum_probs=110.8
Q ss_pred CCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++++..+|+.++++++++||+|++..
T Consensus 58 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 58 DVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALE 137 (273)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEec
Confidence 356789999999999997532 2378999999999999998875 47899999999999899999999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
+++|+++ +..+|+++.++|||||.+++.++......... .......+.. .......++.+++.+++
T Consensus 138 ~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~l 203 (273)
T 3bus_A 138 SLHHMPD---RGRALREMARVLRPGGTVAIADFVLLAPVEGA-------KKEAVDAFRA----GGGVLSLGGIDEYESDV 203 (273)
T ss_dssp CTTTSSC---HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHH-------HHHHHHHHHH----HHTCCCCCCHHHHHHHH
T ss_pred hhhhCCC---HHHHHHHHHHHcCCCeEEEEEEeeccCCCChh-------HHHHHHHHHh----hcCccCCCCHHHHHHHH
Confidence 9999999 88999999999999999999987643221111 0111111110 11234567889999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 204 ~~aGf~~ 210 (273)
T 3bus_A 204 RQAELVV 210 (273)
T ss_dssp HHTTCEE
T ss_pred HHcCCeE
Confidence 9999977
No 21
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=7.9e-19 Score=156.64 Aligned_cols=136 Identities=24% Similarity=0.295 Sum_probs=111.6
Q ss_pred HHHHHHhCCCCCCEEEEECCccCccccc-----CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCc
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLGL-----NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDF 179 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~-----~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~ 179 (377)
.+...+ .+.++.+|||+|||+|.++.. .+..+|+|+|+|+.+++.++++ ++.+..+|+.++++++++
T Consensus 28 ~~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 28 KVLKEF-GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHHHH-TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSC
T ss_pred HHHHHh-CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCC
Confidence 444444 456788999999999997532 4678999999999999999876 488999999999988999
Q ss_pred eeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCC
Q 017080 180 GDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSART 259 (377)
Q Consensus 180 fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 259 (377)
||+|++..+++|+++ +..+++++.++|||||.+++.++....... .......++
T Consensus 107 fD~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----------------------~~~~~~~~~ 160 (219)
T 3dh0_A 107 VDFIFMAFTFHELSE---PLKFLEELKRVAKPFAYLAIIDWKKEERDK-----------------------GPPPEEVYS 160 (219)
T ss_dssp EEEEEEESCGGGCSS---HHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----------------------SCCGGGSCC
T ss_pred eeEEEeehhhhhcCC---HHHHHHHHHHHhCCCeEEEEEEeccccccc-----------------------CCchhcccC
Confidence 999999999999998 889999999999999999999876543210 111133567
Q ss_pred cccHHhHhhcCCCcc
Q 017080 260 LESIPETEDNGSEEQ 274 (377)
Q Consensus 260 ~~~l~~~l~~aGF~~ 274 (377)
.+++.++++++||++
T Consensus 161 ~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 161 EWEVGLILEDAGIRV 175 (219)
T ss_dssp HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCEE
Confidence 889999999999976
No 22
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.78 E-value=4.3e-19 Score=162.26 Aligned_cols=182 Identities=14% Similarity=0.237 Sum_probs=125.2
Q ss_pred hhhHHHHHHHHHhhCcccccccccchHHHHHHHhCCCCCCEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHH
Q 017080 85 ELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVD 160 (377)
Q Consensus 85 ~~~~~~~~~~y~~~a~~y~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~ 160 (377)
.++...+.++|+....... ........+...+..++++.+|||||||+|.++.. .+ .+|+|+|+|+.+++.+++
T Consensus 10 ~~d~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~ 87 (257)
T 3f4k_A 10 DFDFSFICNYFKLLKRQGP-GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNE 87 (257)
T ss_dssp GSCHHHHHHHHTTSSCSSS-CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHH
T ss_pred hhhHHHHHHHHcCccccCC-CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHH
Confidence 3344555566654432211 11111223334444567888999999999997532 34 499999999999999887
Q ss_pred c--------CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhc
Q 017080 161 R--------GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTK 232 (377)
Q Consensus 161 ~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 232 (377)
+ +++++++|+.++++++++||+|++..+++|+ + +..+++++.++|||||++++.++.......
T Consensus 88 ~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~----- 158 (257)
T 3f4k_A 88 NAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-G---FERGMNEWSKYLKKGGFIAVSEASWFTSER----- 158 (257)
T ss_dssp HHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-C---HHHHHHHHHTTEEEEEEEEEEEEEESSSCC-----
T ss_pred HHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhhc-C---HHHHHHHHHHHcCCCcEEEEEEeeccCCCC-----
Confidence 6 2889999999999889999999999999999 6 789999999999999999999854221110
Q ss_pred cccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCccccCCcccCCcchhh
Q 017080 233 WTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQGKEPKQSVPDKLWE 288 (377)
Q Consensus 233 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~~~~~~~~~~~~~~~ 288 (377)
.......|.... ....+.+++.++++++||++.. ...++...|.+
T Consensus 159 ----~~~~~~~~~~~~------~~~~~~~~~~~~l~~aGf~~v~-~~~~~~~~w~~ 203 (257)
T 3f4k_A 159 ----PAEIEDFWMDAY------PEISVIPTCIDKMERAGYTPTA-HFILPENCWTE 203 (257)
T ss_dssp ----CHHHHHHHHHHC------TTCCBHHHHHHHHHHTTEEEEE-EEECCGGGTCC
T ss_pred ----hHHHHHHHHHhC------CCCCCHHHHHHHHHHCCCeEEE-EEECChhhHHH
Confidence 011112232211 1245788999999999998733 23445555543
No 23
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.78 E-value=9.2e-19 Score=161.36 Aligned_cols=151 Identities=17% Similarity=0.240 Sum_probs=113.8
Q ss_pred HHhCCCCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
.+..++++.+|||||||+|.++. ..++.+|+|+|+|+.+++.++++ +++++++|+.++++++++||+|+
T Consensus 40 ~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 119 (267)
T 3kkz_A 40 FIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIW 119 (267)
T ss_dssp TCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred hcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEE
Confidence 33345688999999999999753 24677999999999999999876 38899999999998899999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHH
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIP 264 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~ 264 (377)
+..+++|+ + +..+++++.++|||||++++.++....... .......|... .....+.+++.
T Consensus 120 ~~~~~~~~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---------~~~~~~~~~~~------~~~~~~~~~~~ 180 (267)
T 3kkz_A 120 SEGAIYNI-G---FERGLNEWRKYLKKGGYLAVSECSWFTDER---------PAEINDFWMDA------YPEIDTIPNQV 180 (267)
T ss_dssp ESSCGGGT-C---HHHHHHHHGGGEEEEEEEEEEEEEESSSCC---------CHHHHHHHHHH------CTTCEEHHHHH
T ss_pred EcCCceec-C---HHHHHHHHHHHcCCCCEEEEEEeeecCCCC---------hHHHHHHHHHh------CCCCCCHHHHH
Confidence 99999999 6 789999999999999999999865321110 01111222111 12356778999
Q ss_pred hHhhcCCCccccCCcccCCcch
Q 017080 265 ETEDNGSEEQGKEPKQSVPDKL 286 (377)
Q Consensus 265 ~~l~~aGF~~~~~~~~~~~~~~ 286 (377)
++++++||++... ..++.+.|
T Consensus 181 ~~l~~aGf~~v~~-~~~~~~~w 201 (267)
T 3kkz_A 181 AKIHKAGYLPVAT-FILPENCW 201 (267)
T ss_dssp HHHHHTTEEEEEE-EECCGGGT
T ss_pred HHHHHCCCEEEEE-EECCHhHH
Confidence 9999999987322 33444455
No 24
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.78 E-value=2.2e-19 Score=159.20 Aligned_cols=129 Identities=17% Similarity=0.214 Sum_probs=100.9
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------------------CCeEEEeeCCCCCCCC-
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------------------GHEVLVADAVNLPYRS- 177 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------------------~~~~~~~d~~~~~~~~- 177 (377)
++++.+|||+|||+|.++.. ..+.+|+|+|+|+.|++.|+++ +++++++|+.++++.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 46788999999999997642 2477999999999999999875 4789999999998765
Q ss_pred CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCC
Q 017080 178 DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSA 257 (377)
Q Consensus 178 ~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 257 (377)
++||+|++..+++|++.++ ..+++++++++|||||++++.+...... . .......
T Consensus 100 ~~fD~v~~~~~l~~l~~~~-~~~~l~~~~r~LkpgG~~~l~~~~~~~~--------------------~----~~~~~~~ 154 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADM-RERYVQHLEALMPQACSGLLITLEYDQA--------------------L----LEGPPFS 154 (203)
T ss_dssp HSEEEEEEESCGGGSCHHH-HHHHHHHHHHHSCSEEEEEEEEESSCSS--------------------S----SSSCCCC
T ss_pred CCEEEEEECcchhhCCHHH-HHHHHHHHHHHcCCCcEEEEEEEecCcc--------------------c----cCCCCCC
Confidence 8999999999999998643 6789999999999999966655432210 0 0001112
Q ss_pred CCcccHHhHhhcCCCcc
Q 017080 258 RTLESIPETEDNGSEEQ 274 (377)
Q Consensus 258 ~~~~~l~~~l~~aGF~~ 274 (377)
.+.+++.+++++ ||++
T Consensus 155 ~~~~el~~~~~~-gf~i 170 (203)
T 1pjz_A 155 VPQTWLHRVMSG-NWEV 170 (203)
T ss_dssp CCHHHHHHTSCS-SEEE
T ss_pred CCHHHHHHHhcC-CcEE
Confidence 567889999998 9976
No 25
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.78 E-value=3e-19 Score=163.67 Aligned_cols=147 Identities=18% Similarity=0.281 Sum_probs=108.4
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEeccchh
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~ 190 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++.+.++|+.++++++++||+|++..+++
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 457788999999999997642 3467999999999999999876 58899999999998899999999999999
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcC
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNG 270 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~a 270 (377)
|+++ +..+++++.++|||||.+++. +..... .. ...+........... . .+.......++.+++.++|+++
T Consensus 116 ~~~~---~~~~l~~~~~~L~pgG~l~~~-~~~~~~-~~-~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~~~ 186 (263)
T 2yqz_A 116 LVPD---WPKVLAEAIRVLKPGGALLEG-WDQAEA-SP-EWTLQERWRAFAAEE-G--FPVERGLHAKRLKEVEEALRRL 186 (263)
T ss_dssp GCTT---HHHHHHHHHHHEEEEEEEEEE-EEEECC-CH-HHHHHHHHHHHHHHH-T--CCCCCCHHHHHHHHHHHHHHHT
T ss_pred hcCC---HHHHHHHHHHHCCCCcEEEEE-ecCCCc-cH-HHHHHHHHHHHHHHh-C--CCcccccccCCHHHHHHHHHHc
Confidence 9998 889999999999999999988 332210 00 000111111111111 1 0111123356678899999999
Q ss_pred CCcc
Q 017080 271 SEEQ 274 (377)
Q Consensus 271 GF~~ 274 (377)
||.+
T Consensus 187 Gf~~ 190 (263)
T 2yqz_A 187 GLKP 190 (263)
T ss_dssp TCCC
T ss_pred CCCc
Confidence 9965
No 26
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=1.4e-18 Score=159.22 Aligned_cols=164 Identities=13% Similarity=0.092 Sum_probs=117.9
Q ss_pred ChhhhHHHHHHHHHhhCcccccccccchHHHHHHHh---CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHH
Q 017080 83 TPELEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLN---SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKI 157 (377)
Q Consensus 83 ~~~~~~~~~~~~y~~~a~~y~~~~~~~~~~~~~~l~---~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~ 157 (377)
...++.+++.+.|......|..... .+.+..++. ...++.+|||+|||+|..+.. ..+.+|+|+|+|+.|++.
T Consensus 28 ~~~~~~~~Wd~~y~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 28 NQVLTLEDWKEKWVTRHISFHQEQG--HQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIRE 105 (252)
T ss_dssp TCCCCHHHHHHHHHHTCCTTCCTTC--CHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred cccCCHHHHHHHHhcCCCCcccCCC--CHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 3356678899999775444432221 122223322 235778999999999997642 347899999999999999
Q ss_pred HHHc------------------------CCeEEEeeCCCCCCCC-CceeEEEeccchhhcCChHHHHHHHHHHHHccccC
Q 017080 158 CVDR------------------------GHEVLVADAVNLPYRS-DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKG 212 (377)
Q Consensus 158 a~~~------------------------~~~~~~~d~~~~~~~~-~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~Lkpg 212 (377)
|+++ +++++++|+.++++.+ ++||+|++..+++|++.++ +..+++++.++||||
T Consensus 106 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~-~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 106 FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGD-HDRYADIILSLLRKE 184 (252)
T ss_dssp HHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGG-HHHHHHHHHHTEEEE
T ss_pred HHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHH-HHHHHHHHHHHcCCC
Confidence 9653 3678999999988764 8999999999999998654 688999999999999
Q ss_pred cEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 213 SLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 213 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
|++++.++..... . .. .....++.+++.+++.. +|++
T Consensus 185 G~l~l~~~~~~~~------------------~----~~--g~~~~~~~~el~~~l~~-~f~v 221 (252)
T 2gb4_A 185 FQYLVAVLSYDPT------------------K----HA--GPPFYVPSAELKRLFGT-KCSM 221 (252)
T ss_dssp EEEEEEEEECCTT------------------S----CC--CSSCCCCHHHHHHHHTT-TEEE
T ss_pred eEEEEEEEecCCc------------------c----CC--CCCCCCCHHHHHHHhhC-CeEE
Confidence 9998765432210 0 00 01112577889999987 5966
No 27
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=9.2e-19 Score=162.47 Aligned_cols=153 Identities=18% Similarity=0.205 Sum_probs=113.8
Q ss_pred HHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+...+ .+.++.+|||||||+|.++.. .++.+|+|+|+|+.|++.++++ ++.+.++|+.++++ +++||+|++..
T Consensus 48 ~l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~ 125 (279)
T 3ccf_A 48 DLLQLL-NPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA 125 (279)
T ss_dssp HHHHHH-CCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEES
T ss_pred HHHHHh-CCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcc
Confidence 444444 356788999999999997642 3788999999999999999987 79999999999887 68999999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
+++|+++ +..+|++++++|||||++++.++..... ..+...+ ...................+.+.+++.++|
T Consensus 126 ~l~~~~d---~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (279)
T 3ccf_A 126 MLHWVKE---PEAAIASIHQALKSGGRFVAEFGGKGNI-KYILEAL----YNALETLGIHNPQALNPWYFPSIGEYVNIL 197 (279)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEEECTTTT-HHHHHHH----HHHHHHHTCCCGGGGCCCCCCCHHHHHHHH
T ss_pred hhhhCcC---HHHHHHHHHHhcCCCcEEEEEecCCcch-HHHHHHH----HHHHHhcCCccccCcCceeCCCHHHHHHHH
Confidence 9999999 8899999999999999999988764321 1111111 111111100001112223566889999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 198 ~~aGf~~ 204 (279)
T 3ccf_A 198 EKQGFDV 204 (279)
T ss_dssp HHHTEEE
T ss_pred HHcCCEE
Confidence 9999977
No 28
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.77 E-value=6.4e-19 Score=159.91 Aligned_cols=142 Identities=17% Similarity=0.195 Sum_probs=109.7
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++.+.++|++++++++++||+|++..++
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCch
Confidence 467889999999999997532 2345999999999999998875 4889999999999989999999999999
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhc
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDN 269 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~ 269 (377)
+|+++ +..+|+++.++|||||++++.++..... .....+. ........ ..+...++.+++.++|++
T Consensus 98 ~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~ll~~ 163 (239)
T 1xxl_A 98 HHFSD---VRKAVREVARVLKQDGRFLLVDHYAPED--PVLDEFV----NHLNRLRD-----PSHVRESSLSEWQAMFSA 163 (239)
T ss_dssp GGCSC---HHHHHHHHHHHEEEEEEEEEEEECBCSS--HHHHHHH----HHHHHHHC-----TTCCCCCBHHHHHHHHHH
T ss_pred hhccC---HHHHHHHHHHHcCCCcEEEEEEcCCCCC--hhHHHHH----HHHHHhcc-----ccccCCCCHHHHHHHHHH
Confidence 99999 8899999999999999999987654322 1111110 00111111 122455788999999999
Q ss_pred CCCcc
Q 017080 270 GSEEQ 274 (377)
Q Consensus 270 aGF~~ 274 (377)
+||.+
T Consensus 164 aGf~~ 168 (239)
T 1xxl_A 164 NQLAY 168 (239)
T ss_dssp TTEEE
T ss_pred CCCcE
Confidence 99976
No 29
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.77 E-value=6e-19 Score=162.18 Aligned_cols=102 Identities=20% Similarity=0.308 Sum_probs=89.5
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEecc-chhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIA-VLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~-~l~h~~~ 194 (377)
++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.|+++ ++.++++|+.++++ +++||+|++.. +++|+++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCC
Confidence 45678999999999998643 3466999999999999999987 79999999999887 78999999998 9999987
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
.+++..+|++++++|||||.+++.++..
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 5558899999999999999999986543
No 30
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.77 E-value=2.2e-18 Score=155.72 Aligned_cols=160 Identities=14% Similarity=0.196 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHhhCcccccccccchHHHHHHHhCC-CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-
Q 017080 86 LEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSL-PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR- 161 (377)
Q Consensus 86 ~~~~~~~~~y~~~a~~y~~~~~~~~~~~~~~l~~~-~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~- 161 (377)
.+.+++.+.|......|... .....+..++... .++.+|||||||+|.++.. .++.+|+|+|+|+.+++.++++
T Consensus 31 ~~~~~w~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~ 108 (235)
T 3lcc_A 31 VEEGGWEKCWEEEITPWDQG--RATPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETY 108 (235)
T ss_dssp HHHHHHHHHHHTTCCTTCCS--SCCHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHH
T ss_pred cCHHHHHHHHhcCCCCcccC--CCCHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHh
Confidence 44567777776654444422 2223444444322 2345999999999997642 5778999999999999999886
Q ss_pred -------CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccc
Q 017080 162 -------GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWT 234 (377)
Q Consensus 162 -------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 234 (377)
+++++++|+.+++ ++++||+|++..+++|++..+ +..+++++.++|||||.+++..+......
T Consensus 109 ~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-------- 178 (235)
T 3lcc_A 109 GSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEM-RPAWAKSMYELLKPDGELITLMYPITDHV-------- 178 (235)
T ss_dssp TTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGG-HHHHHHHHHHHEEEEEEEEEEECCCSCCC--------
T ss_pred hccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHH-HHHHHHHHHHHCCCCcEEEEEEecccccC--------
Confidence 2789999999976 466999999999999998433 88999999999999999999876543110
Q ss_pred cchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 235 PLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 235 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
......++.+++.++++++||++
T Consensus 179 -----------------~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 179 -----------------GGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp -----------------SCSSCCCCHHHHHHHHGGGTEEE
T ss_pred -----------------CCCCccCCHHHHHHHHHHcCCeE
Confidence 01112367789999999999977
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=2.3e-18 Score=157.35 Aligned_cols=138 Identities=20% Similarity=0.153 Sum_probs=108.1
Q ss_pred CCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++++.++|+.++++ +++||+|++..
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVG 111 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEES
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECC
Confidence 467889999999999997532 2367999999999999999875 47899999999887 88999999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
+++|+++ +..+|++++++|||||.+++.++...... ....+...|.. .......+.+++.+++
T Consensus 112 ~~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~---------~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 174 (256)
T 1nkv_A 112 ATWIAGG---FAGAEELLAQSLKPGGIMLIGEPYWRQLP---------ATEEIAQACGV-----SSTSDFLTLPGLVGAF 174 (256)
T ss_dssp CGGGTSS---SHHHHHHHTTSEEEEEEEEEEEEEETTCC---------SSHHHHHTTTC-----SCGGGSCCHHHHHHHH
T ss_pred ChHhcCC---HHHHHHHHHHHcCCCeEEEEecCcccCCC---------ChHHHHHHHhc-----ccccccCCHHHHHHHH
Confidence 9999998 88999999999999999999875432211 01122222321 1123467888999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||.+
T Consensus 175 ~~aGf~~ 181 (256)
T 1nkv_A 175 DDLGYDV 181 (256)
T ss_dssp HTTTBCC
T ss_pred HHCCCee
Confidence 9999976
No 32
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.76 E-value=4.5e-19 Score=164.09 Aligned_cols=147 Identities=22% Similarity=0.233 Sum_probs=109.8
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.++++.+|||||||+|.++. ..|+.+|+|+|+|+.+++.++++ ++.++.+|+.++++++++||+|++..
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 45788999999999999753 36789999999999999999876 57899999999998899999999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhh-hhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSL-VTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
+++|+++ +..+++++.++|||||++++.++......... ..........+..... ......++..++.++
T Consensus 114 ~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~ 184 (276)
T 3mgg_A 114 VLEHLQS---PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQA------YMKGNSLVGRQIYPL 184 (276)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHH------HTTCCTTGGGGHHHH
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHH------hcCCCcchHHHHHHH
Confidence 9999999 88999999999999999999886532110000 0000000011111000 011234566889999
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
|+++||++
T Consensus 185 l~~aGf~~ 192 (276)
T 3mgg_A 185 LQESGFEK 192 (276)
T ss_dssp HHHTTCEE
T ss_pred HHHCCCCe
Confidence 99999987
No 33
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.76 E-value=3.2e-19 Score=166.82 Aligned_cols=139 Identities=16% Similarity=0.086 Sum_probs=99.3
Q ss_pred CCCCEEEEECCccCccc--------ccCCCceE--EEEeCCHHHHHHHHHc--------CCeE--EEeeCCCCC------
Q 017080 121 PSGSLVLDAGCGNGKYL--------GLNPDCFF--VGCDISPSLIKICVDR--------GHEV--LVADAVNLP------ 174 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~--------~~~~~~~v--~gvD~s~~~~~~a~~~--------~~~~--~~~d~~~~~------ 174 (377)
.++.+|||||||+|.++ ...++..| +|+|+|+.|++.|+++ ++.+ ..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999642 22466754 9999999999998875 2233 344444332
Q ss_pred CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCC
Q 017080 175 YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRS 254 (377)
Q Consensus 175 ~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 254 (377)
+++++||+|++..++||++| +.++|++++|+|||||++++........ |......+ |... ....+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~-------~~~~~~~~---~~~~--~~~~~ 195 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD---IPATLKFFHSLLGTNAKMLIIVVSGSSG-------WDKLWKKY---GSRF--PQDDL 195 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC---HHHHHHHHHHTEEEEEEEEEEEECTTSH-------HHHHHHHH---GGGS--CCCTT
T ss_pred cCCCceeEEEEeeeeeecCC---HHHHHHHHHHHcCCCcEEEEEEecCCcc-------HHHHHHHH---HHhc--cCCCc
Confidence 46789999999999999999 8999999999999999999987653211 11111111 1110 11123
Q ss_pred CCCCCcccHHhHhhcCCCcc
Q 017080 255 PSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 255 ~~~~~~~~l~~~l~~aGF~~ 274 (377)
..+++.+++.++|+++||++
T Consensus 196 ~~~~~~~~~~~~l~~aGf~~ 215 (292)
T 2aot_A 196 CQYITSDDLTQMLDNLGLKY 215 (292)
T ss_dssp CCCCCHHHHHHHHHHHTCCE
T ss_pred ccCCCHHHHHHHHHHCCCce
Confidence 45678899999999999976
No 34
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.76 E-value=1.3e-18 Score=169.06 Aligned_cols=139 Identities=18% Similarity=0.167 Sum_probs=108.7
Q ss_pred CCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc---------------CCeEEEeeCCCC------
Q 017080 120 LPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR---------------GHEVLVADAVNL------ 173 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~---------------~~~~~~~d~~~~------ 173 (377)
+.++.+|||||||+|.++. . .++.+|+|+|+|+.+++.++++ +++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999998653 2 3788999999999999999874 588999999987
Q ss_pred CCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcC
Q 017080 174 PYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVR 253 (377)
Q Consensus 174 ~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 253 (377)
++++++||+|++..+++|+++ +..+|++++++|||||++++.++........... .....|.. .
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~-------~~~~~~~~------~ 224 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN---KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQ-------QDPILYGE------C 224 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHH-------HCHHHHHT------T
T ss_pred CCCCCCEEEEEEccchhcCCC---HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHh-------hhHHHhhc------c
Confidence 888999999999999999999 8999999999999999999998654432111111 00111111 1
Q ss_pred CCCCCCcccHHhHhhcCCCcc
Q 017080 254 SPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 254 ~~~~~~~~~l~~~l~~aGF~~ 274 (377)
....++.+++.++|+++||.+
T Consensus 225 ~~~~~~~~~~~~ll~~aGF~~ 245 (383)
T 4fsd_A 225 LGGALYLEDFRRLVAEAGFRD 245 (383)
T ss_dssp CTTCCBHHHHHHHHHHTTCCC
T ss_pred cccCCCHHHHHHHHHHCCCce
Confidence 123566789999999999976
No 35
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.76 E-value=1e-18 Score=159.62 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=86.8
Q ss_pred CCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 122 SGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
++.+|||||||+|.++.. ..+. +|+|+|+|+.+++.++++ ++.++++|+.++++++++||+|++..+++|+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 123 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIAS 123 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhh
Confidence 678999999999997642 2233 999999999999999987 578999999999988999999999999999988
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+..+|++++++|||||.+++.++.
T Consensus 124 ---~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 124 ---FDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 899999999999999999998754
No 36
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.75 E-value=2.7e-18 Score=154.34 Aligned_cols=155 Identities=20% Similarity=0.225 Sum_probs=111.0
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----C--------CeEEEeeCCCCCCCCCceeEEEe
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----G--------HEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~--------~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
++++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.++++ + +.+..+|+..+++++++||+|++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 46788999999999997642 2377999999999999999985 2 47899999999988999999999
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHH--HhhhhCCCCC---CcCCCCCCCc
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKY--VEEWIGPGSP---RVRSPSARTL 260 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~--~~~w~~~~~~---~~~~~~~~~~ 260 (377)
..+++|+++.+....+++++.++|||||.+++.++............+....... ...+...... .......++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 9999999995445599999999999999999998765432211111000000000 0000000000 0112346789
Q ss_pred ccHHhHhhcCCCcc
Q 017080 261 ESIPETEDNGSEEQ 274 (377)
Q Consensus 261 ~~l~~~l~~aGF~~ 274 (377)
+++.++++++||++
T Consensus 188 ~~l~~ll~~aGf~~ 201 (235)
T 3sm3_A 188 KELVFLLTDCRFEI 201 (235)
T ss_dssp HHHHHHHHTTTEEE
T ss_pred HHHHHHHHHcCCEE
Confidence 99999999999976
No 37
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=1.6e-18 Score=157.34 Aligned_cols=165 Identities=13% Similarity=0.089 Sum_probs=118.0
Q ss_pred HHHHHHHHHhhCccccccc--ccch--------HHHHHHHhC----CCCCCEEEEECCccCccccc---CCCceEEEEeC
Q 017080 88 KKYVHRVYDAIAPHFSSTR--FAKW--------PKVATFLNS----LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDI 150 (377)
Q Consensus 88 ~~~~~~~y~~~a~~y~~~~--~~~~--------~~~~~~l~~----~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~ 150 (377)
.+...++|+..+..|+... +..+ ..+...+.. ..++.+|||||||+|.++.. ....+|+|+|+
T Consensus 31 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~ 110 (241)
T 2ex4_A 31 YSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDI 110 (241)
T ss_dssp HHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEES
T ss_pred HHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeC
Confidence 3456677888877665311 1111 122222221 23578999999999997642 22459999999
Q ss_pred CHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 151 SPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 151 s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
|+.+++.++++ ++.++.+|+.++++++++||+|++..+++|+++++ ...+|+++.++|||||.+++.++...
T Consensus 111 s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~ 189 (241)
T 2ex4_A 111 TEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQH-LAEFLRRCKGSLRPNGIIVIKDNMAQ 189 (241)
T ss_dssp CHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEEEBS
T ss_pred CHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHH-HHHHHHHHHHhcCCCeEEEEEEccCC
Confidence 99999999876 26789999999888888999999999999998843 56999999999999999999886543
Q ss_pred ccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 224 QEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
. . ..+ .. .......+.+++.++++++||++
T Consensus 190 ~--~---~~~------------~~----~~~~~~~~~~~~~~~l~~aGf~~ 219 (241)
T 2ex4_A 190 E--G---VIL------------DD----VDSSVCRDLDVVRRIICSAGLSL 219 (241)
T ss_dssp S--S---EEE------------ET----TTTEEEEBHHHHHHHHHHTTCCE
T ss_pred C--c---cee------------cc----cCCcccCCHHHHHHHHHHcCCeE
Confidence 2 0 000 00 00111236788999999999976
No 38
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.75 E-value=3.6e-18 Score=156.61 Aligned_cols=140 Identities=21% Similarity=0.254 Sum_probs=109.9
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCCCceeEEEeccchhh
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h 191 (377)
+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+.++++++++||+|++..+++|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 46788999999999997642 1278999999999999999986 578999999999988999999999999999
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCC
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGS 271 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aG 271 (377)
++..+ +..+|+++.++|||||.+++.++..... ..+......+... .....++.+++.++++++|
T Consensus 133 ~~~~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 133 LSLEN-KNKLFQKCYKWLKPTGTLLITDYCATEK-----ENWDDEFKEYVKQ---------RKYTLITVEEYADILTACN 197 (266)
T ss_dssp SCHHH-HHHHHHHHHHHEEEEEEEEEEEEEESCG-----GGCCHHHHHHHHH---------HTCCCCCHHHHHHHHHHTT
T ss_pred cChHH-HHHHHHHHHHHcCCCCEEEEEEeccCCc-----ccchHHHHHHHhc---------CCCCCCCHHHHHHHHHHcC
Confidence 95322 8999999999999999999998764431 1111111111111 1234678899999999999
Q ss_pred Ccc
Q 017080 272 EEQ 274 (377)
Q Consensus 272 F~~ 274 (377)
|++
T Consensus 198 f~~ 200 (266)
T 3ujc_A 198 FKN 200 (266)
T ss_dssp CEE
T ss_pred CeE
Confidence 976
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.75 E-value=3.2e-18 Score=154.91 Aligned_cols=108 Identities=21% Similarity=0.333 Sum_probs=91.5
Q ss_pred hHHHHHHHhCCCCCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc----CCeEEEeeCCCCCCCCCceeE
Q 017080 110 WPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR----GHEVLVADAVNLPYRSDFGDA 182 (377)
Q Consensus 110 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~~fD~ 182 (377)
+..+...+ ...++.+|||||||+|.++.. ..+. +|+|+|+|+.+++.++++ ++.+..+|+..+++++++||+
T Consensus 32 ~~~l~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 32 WPALRAML-PEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHHHHS-CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHHHhc-cccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceE
Confidence 33444444 345778999999999997542 2245 999999999999999987 478999999998888899999
Q ss_pred EEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 183 AISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 183 V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
|++..+++|+++ +..+|++++++|||||.+++.++.
T Consensus 111 v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 111 AYSSLALHYVED---VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeccccccch---HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999999999998 889999999999999999998764
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.75 E-value=4.6e-18 Score=159.97 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=112.2
Q ss_pred CCCCCCEEEEECCccCcccc-----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLG-----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~-----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
.+.++.+|||||||+|.++. ..++.+|+|+|+|+.+++.++++ +++++++|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 46788999999999999542 36788999999999999999986 278999999999887 99999999
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccc-----cchHHHHhhhhCCCCCCcCCCCCCCc
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWT-----PLTQKYVEEWIGPGSPRVRSPSARTL 260 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~w~~~~~~~~~~~~~~~~ 260 (377)
..+++|+++.+....+++++.++|||||++++.++........ ...|. +.........+. .....+...+++.
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 271 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSP-DSPWDMQAIDPHDLQLQQLVFT-RLIQPRWNALRTH 271 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCT-TCCCCGGGSCHHHHHHHHHHHH-HTTCCSCCCCCCH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccc-cccceeeccccchhhhhhhHHH-HHHhhhhhccCCH
Confidence 9999999996545568999999999999999988664322111 11111 000000000000 0111223456789
Q ss_pred ccHHhHhhcCCCcc
Q 017080 261 ESIPETEDNGSEEQ 274 (377)
Q Consensus 261 ~~l~~~l~~aGF~~ 274 (377)
+++.++|+++||++
T Consensus 272 ~~~~~~l~~aGF~~ 285 (305)
T 3ocj_A 272 AQTRAQLEEAGFTD 285 (305)
T ss_dssp HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCEE
Confidence 99999999999976
No 41
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.74 E-value=2.1e-18 Score=162.79 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=108.2
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.|+++ +++++.+|+.++++++++||+|++..+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 56789999999999997642 2268999999999999999875 488999999999988999999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhh
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETED 268 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~ 268 (377)
++|+ + +..+|+++.++|||||++++.++........... ... .....+. ...++.+++.++++
T Consensus 195 l~~~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~----~~~-~~~~~~~--------~~~~s~~~~~~~l~ 257 (312)
T 3vc1_A 195 TMYV-D---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSK----WVS-QINAHFE--------CNIHSRREYLRAMA 257 (312)
T ss_dssp GGGS-C---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCH----HHH-HHHHHHT--------CCCCBHHHHHHHHH
T ss_pred hhhC-C---HHHHHHHHHHHcCCCcEEEEEEccccccccchhH----HHH-HHHhhhc--------CCCCCHHHHHHHHH
Confidence 9999 6 7899999999999999999998765432111000 111 1111111 13667899999999
Q ss_pred cCCCcc
Q 017080 269 NGSEEQ 274 (377)
Q Consensus 269 ~aGF~~ 274 (377)
++||++
T Consensus 258 ~aGf~~ 263 (312)
T 3vc1_A 258 DNRLVP 263 (312)
T ss_dssp TTTEEE
T ss_pred HCCCEE
Confidence 999976
No 42
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=2.5e-18 Score=152.09 Aligned_cols=156 Identities=19% Similarity=0.173 Sum_probs=113.9
Q ss_pred HHHHHHhCCCCCCEEEEECCccCccc-c--cCCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeE
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYL-G--LNPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDA 182 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~ 182 (377)
++...+..+.++.+|||+|||+|.++ . ..++.+|+|+|+|+.+++.++++ ++++.++|+.++++++++||+
T Consensus 13 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 92 (209)
T 2p8j_A 13 RFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSF 92 (209)
T ss_dssp HHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEE
T ss_pred HHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeE
Confidence 44455556677899999999999873 2 25678999999999999998875 588999999999988899999
Q ss_pred EEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCccc
Q 017080 183 AISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLES 262 (377)
Q Consensus 183 V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 262 (377)
|++..+++|++. +++..+++++.++|||||.+++.+++.......... ........ ... ........+++.++
T Consensus 93 v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~~~~-~~~--~~~~~~~~~~~~~e 165 (209)
T 2p8j_A 93 VYSYGTIFHMRK-NDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGE---KIGEGEFL-QLE--RGEKVIHSYVSLEE 165 (209)
T ss_dssp EEECSCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSE---EEETTEEE-ECC---CCCEEEEEECHHH
T ss_pred EEEcChHHhCCH-HHHHHHHHHHHHHcCCCcEEEEEEecccchhccchh---hhccccce-ecc--CCCceeEEecCHHH
Confidence 999999999953 338999999999999999999998765432110000 00000000 000 11112235778889
Q ss_pred HHhHhhcCCCcc
Q 017080 263 IPETEDNGSEEQ 274 (377)
Q Consensus 263 l~~~l~~aGF~~ 274 (377)
+.+++.++||..
T Consensus 166 ~~~~~~~~g~~~ 177 (209)
T 2p8j_A 166 ADKYFKDMKVLF 177 (209)
T ss_dssp HHHTTTTSEEEE
T ss_pred HHHHHhhcCcee
Confidence 999999999955
No 43
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.74 E-value=4.7e-18 Score=153.85 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=90.4
Q ss_pred HHHHHhCC-CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEE
Q 017080 113 VATFLNSL-PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAA 183 (377)
Q Consensus 113 ~~~~l~~~-~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V 183 (377)
+...+... .++.+|||||||+|.++.. ..+.+++|+|+|+.+++.++++ ++.+.++|+.+++++ ++||+|
T Consensus 27 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v 105 (246)
T 1y8c_A 27 IIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLI 105 (246)
T ss_dssp HHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEE
T ss_pred HHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEE
Confidence 33444332 4678999999999997642 3367999999999999999876 689999999998876 899999
Q ss_pred Eecc-chhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 184 ISIA-VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 184 ~~~~-~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++.. +++|+++.+++..+|++++++|||||.+++..++
T Consensus 106 ~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9998 9999976555899999999999999999997765
No 44
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=1.6e-18 Score=154.90 Aligned_cols=175 Identities=17% Similarity=0.120 Sum_probs=119.3
Q ss_pred HHHHHHHHhhCccccccc----cc-----chHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHH
Q 017080 89 KYVHRVYDAIAPHFSSTR----FA-----KWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKI 157 (377)
Q Consensus 89 ~~~~~~y~~~a~~y~~~~----~~-----~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~ 157 (377)
+.+.+.|+..+..|+... .. ....+...+.. .++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~ 89 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILG-RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDA 89 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHH-TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhc-CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 455666776666665421 11 11234444433 3558999999999997642 347799999999999999
Q ss_pred HHHc-CCeEEEeeCCCC---CCCC-CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchh-hhh
Q 017080 158 CVDR-GHEVLVADAVNL---PYRS-DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKS-LVT 231 (377)
Q Consensus 158 a~~~-~~~~~~~d~~~~---~~~~-~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~-~~~ 231 (377)
++++ ++.+...|+.++ ++.. ++||+|++..+++ ..+ +..++++++++|||||++++.++........ ...
T Consensus 90 a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 165 (227)
T 3e8s_A 90 ARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQD---IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQD 165 (227)
T ss_dssp HHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC---CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSC
T ss_pred HHHhcccccchhhHHhhcccccccCCCccEEEECchhh-hhh---HHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Confidence 9988 678888888776 5444 4599999999999 666 7899999999999999999998765432211 111
Q ss_pred ccccchHHHHhhhhCCCCC-CcCCCCCCCcccHHhHhhcCCCcc
Q 017080 232 KWTPLTQKYVEEWIGPGSP-RVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 232 ~~~~~~~~~~~~w~~~~~~-~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
.|.. ..|...... ......+++.+++.++|+++||++
T Consensus 166 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 203 (227)
T 3e8s_A 166 GWRE------ESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRL 203 (227)
T ss_dssp EEEE------ECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEE
T ss_pred ccch------hhhhccccCcccceEEEecHHHHHHHHHHcCCeE
Confidence 1100 011111111 111234568899999999999977
No 45
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.73 E-value=1.2e-17 Score=149.02 Aligned_cols=139 Identities=17% Similarity=0.122 Sum_probs=101.8
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
.++.+|||||||+|.++. ..+..+|+|+|+|+.+++.++++ +++++++|+...+.++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 467899999999999764 24667999999999999999887 58899999988777778999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHH
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIP 264 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~ 264 (377)
+..+++|+++++ ...+++++.++|||||.+++...... . ..+.. +.........+...++.+++.
T Consensus 108 ~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~li~~~~~~~---~---~~~~~--------~~~~~~~~~~~~~~~~~~~l~ 172 (217)
T 3jwh_A 108 VIEVIEHLDLSR-LGAFERVLFEFAQPKIVIVTTPNIEY---N---VKFAN--------LPAGKLRHKDHRFEWTRSQFQ 172 (217)
T ss_dssp EESCGGGCCHHH-HHHHHHHHHTTTCCSEEEEEEEBHHH---H---HHTC-------------------CCSCBCHHHHH
T ss_pred eHHHHHcCCHHH-HHHHHHHHHHHcCCCEEEEEccCccc---c---hhhcc--------cccccccccccccccCHHHHH
Confidence 999999998633 58999999999999996665542110 0 00000 000001112234457888888
Q ss_pred ----hHhhcCCCcc
Q 017080 265 ----ETEDNGSEEQ 274 (377)
Q Consensus 265 ----~~l~~aGF~~ 274 (377)
++++++||.+
T Consensus 173 ~~~~~~~~~~Gf~v 186 (217)
T 3jwh_A 173 NWANKITERFAYNV 186 (217)
T ss_dssp HHHHHHHHHSSEEE
T ss_pred HHHHHHHHHcCceE
Confidence 8889999966
No 46
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.73 E-value=1.4e-17 Score=148.95 Aligned_cols=143 Identities=18% Similarity=0.192 Sum_probs=109.8
Q ss_pred CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCC--CCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVN--LPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~--~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
.++.+|||+|||+|.++.. ..+.+++|+|+|+.+++.++++..++..+|+.+ .++++++||+|++..+++|+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~-- 108 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFD-- 108 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSC--
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCC--
Confidence 4778999999999997532 225899999999999999998877899999987 5677889999999999999999
Q ss_pred HHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCC--CCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 197 RRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGS--PRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
+..+++++.++|||||.+++.+++...... . .......|..... ....+...++.+++.++++++||++
T Consensus 109 -~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 179 (230)
T 3cc8_A 109 -PWAVIEKVKPYIKQNGVILASIPNVSHISV-L-------APLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSI 179 (230)
T ss_dssp -HHHHHHHTGGGEEEEEEEEEEEECTTSHHH-H-------HHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEEeCCcchHHH-H-------HHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeE
Confidence 789999999999999999999876432110 0 0011111211100 1122346788999999999999977
No 47
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.73 E-value=1.4e-17 Score=153.31 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=99.7
Q ss_pred CCCCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc-----------------------------------
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR----------------------------------- 161 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~----------------------------------- 161 (377)
..++.+|||||||+|.+... .+++ +|+|+|+|+.|++.|+++
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 45678999999999987543 4454 799999999999988753
Q ss_pred -CCe-EEEeeCCCC-CC---CCCceeEEEeccchhhc-CChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccc
Q 017080 162 -GHE-VLVADAVNL-PY---RSDFGDAAISIAVLHHL-STESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWT 234 (377)
Q Consensus 162 -~~~-~~~~d~~~~-~~---~~~~fD~V~~~~~l~h~-~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 234 (377)
++. ++++|+... |+ ..++||+|++..++||+ ++.+++..++++++++|||||.+++..+..... +.
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-------~~ 205 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-------YM 205 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-------EE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-------ce
Confidence 122 889999873 43 35799999999999997 443447899999999999999999997543210 00
Q ss_pred cchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 235 PLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 235 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
.. ........++.+++.++|+++||++
T Consensus 206 ----------~g---~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 206 ----------VG---KREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp ----------ET---TEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred ----------eC---CeEeeccccCHHHHHHHHHHCCCEE
Confidence 00 0000123567889999999999976
No 48
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.72 E-value=1e-17 Score=149.53 Aligned_cols=139 Identities=19% Similarity=0.180 Sum_probs=102.0
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
.++.+|||||||+|.++. ..+..+|+|+|+|+.+++.++++ +++++++|+...++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 467899999999999763 24557999999999999999886 68999999988888789999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHH
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIP 264 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~ 264 (377)
+..+++|+++++ ...+++++.++|||||.+++. ++.... ..+....... .....+...++.+++.
T Consensus 108 ~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~~i~~-~~~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~l~ 172 (219)
T 3jwg_A 108 VIEVIEHLDENR-LQAFEKVLFEFTRPQTVIVST-PNKEYN-----FHYGNLFEGN--------LRHRDHRFEWTRKEFQ 172 (219)
T ss_dssp EESCGGGCCHHH-HHHHHHHHHTTTCCSEEEEEE-EBGGGG-----GCCCCT-------------GGGCCTTSBCHHHHH
T ss_pred EHHHHHhCCHHH-HHHHHHHHHHhhCCCEEEEEc-cchhhh-----hhhcccCccc--------ccccCceeeecHHHHH
Confidence 999999998633 579999999999999955544 332110 0010000000 0012234456778888
Q ss_pred ----hHhhcCCCcc
Q 017080 265 ----ETEDNGSEEQ 274 (377)
Q Consensus 265 ----~~l~~aGF~~ 274 (377)
++++++||.+
T Consensus 173 ~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 173 TWAVKVAEKYGYSV 186 (219)
T ss_dssp HHHHHHHHHHTEEE
T ss_pred HHHHHHHHHCCcEE
Confidence 7888999966
No 49
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.72 E-value=5.5e-18 Score=154.50 Aligned_cols=164 Identities=9% Similarity=0.028 Sum_probs=116.9
Q ss_pred HHHHHHHhhCccccccc--c-----cchHHHHHHHhC--CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHH
Q 017080 90 YVHRVYDAIAPHFSSTR--F-----AKWPKVATFLNS--LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKI 157 (377)
Q Consensus 90 ~~~~~y~~~a~~y~~~~--~-----~~~~~~~~~l~~--~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~ 157 (377)
...++|+.....|+... + ........++.. ..++.+|||||||+|.++.. ....+|+|+|+|+.+++.
T Consensus 52 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~ 131 (254)
T 1xtp_A 52 KALEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEE 131 (254)
T ss_dssp HHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHH
T ss_pred hhhhHHhcCCccccceecCcCccCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHH
Confidence 45566777666554311 1 111112233333 34678999999999997642 124579999999999999
Q ss_pred HHHc-----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhc
Q 017080 158 CVDR-----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTK 232 (377)
Q Consensus 158 a~~~-----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~ 232 (377)
++++ +++++++|+..+++++++||+|++..+++|+++.+ +..+|+++.++|||||.+++.++......
T Consensus 132 a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~------ 204 (254)
T 1xtp_A 132 AKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDAD-FVKFFKHCQQALTPNGYIFFKENCSTGDR------ 204 (254)
T ss_dssp HHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEEBC--CC------
T ss_pred HHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHH-HHHHHHHHHHhcCCCeEEEEEecCCCccc------
Confidence 9986 47889999999888889999999999999997633 88999999999999999999986432110
Q ss_pred cccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 233 WTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 233 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
+ +.. ........+.+++.++++++||++
T Consensus 205 ~----------~~~----~~~~~~~~~~~~~~~~l~~aGf~~ 232 (254)
T 1xtp_A 205 F----------LVD----KEDSSLTRSDIHYKRLFNESGVRV 232 (254)
T ss_dssp E----------EEE----TTTTEEEBCHHHHHHHHHHHTCCE
T ss_pred c----------eec----ccCCcccCCHHHHHHHHHHCCCEE
Confidence 0 000 001122457789999999999976
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.72 E-value=8.4e-18 Score=156.85 Aligned_cols=134 Identities=19% Similarity=0.161 Sum_probs=98.4
Q ss_pred CCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc---------------------C--------------
Q 017080 121 PSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR---------------------G-------------- 162 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~---------------------~-------------- 162 (377)
.++.+|||||||+|.+... .++.+|+|+|+|+.|++.|+++ +
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 3678999999999995432 3467999999999999988762 1
Q ss_pred --CeEEEeeCCC-CCC-----CCCceeEEEeccchhhcCCh-HHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhcc
Q 017080 163 --HEVLVADAVN-LPY-----RSDFGDAAISIAVLHHLSTE-SRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKW 233 (377)
Q Consensus 163 --~~~~~~d~~~-~~~-----~~~~fD~V~~~~~l~h~~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 233 (377)
+.++.+|+.+ +|+ ++++||+|++..+++|+... .++..+|++++++|||||+|++.......
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~--------- 220 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEES--------- 220 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCC---------
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcc---------
Confidence 3456678887 553 35679999999999995442 23899999999999999999998532110
Q ss_pred ccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 234 TPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 234 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
|+.. .........++.+++.++|+++||++
T Consensus 221 ----------~~~~-~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 221 ----------WYLA-GEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp ----------EEEE-TTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred ----------eEEc-CCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 0000 00111234678899999999999976
No 51
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.72 E-value=3.1e-18 Score=168.08 Aligned_cols=136 Identities=11% Similarity=0.105 Sum_probs=104.5
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcCCeEEE-----eeCCCCCCCCCceeEEEeccchhhc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRGHEVLV-----ADAVNLPYRSDFGDAAISIAVLHHL 192 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~d~~~~~~~~~~fD~V~~~~~l~h~ 192 (377)
+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.|+++++.... .++..+++++++||+|++..+++|+
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~ 184 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHI 184 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhc
Confidence 45788999999999998753 3467999999999999999998665544 3334456668999999999999999
Q ss_pred CChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCC
Q 017080 193 STESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSE 272 (377)
Q Consensus 193 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF 272 (377)
++ +..+|++++++|||||++++.++...... . . ..|... ...+..+++.+++.++++++||
T Consensus 185 ~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~----~------~---~~~~~~---~~~~~~~~s~~~l~~ll~~aGf 245 (416)
T 4e2x_A 185 PY---VQSVLEGVDALLAPDGVFVFEDPYLGDIV----A------K---TSFDQI---FDEHFFLFSATSVQGMAQRCGF 245 (416)
T ss_dssp TT---HHHHHHHHHHHEEEEEEEEEEEECHHHHH----H------H---TCGGGC---STTCCEECCHHHHHHHHHHTTE
T ss_pred CC---HHHHHHHHHHHcCCCeEEEEEeCChHHhh----h------h---cchhhh---hhhhhhcCCHHHHHHHHHHcCC
Confidence 98 89999999999999999999876532110 0 0 001000 1123456888999999999999
Q ss_pred cc
Q 017080 273 EQ 274 (377)
Q Consensus 273 ~~ 274 (377)
++
T Consensus 246 ~~ 247 (416)
T 4e2x_A 246 EL 247 (416)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 52
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.72 E-value=6.9e-18 Score=157.42 Aligned_cols=135 Identities=22% Similarity=0.176 Sum_probs=89.3
Q ss_pred HHHHHHHHHhhCccccccccc----chHHH----HHHH--hCCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHH
Q 017080 88 KKYVHRVYDAIAPHFSSTRFA----KWPKV----ATFL--NSLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSL 154 (377)
Q Consensus 88 ~~~~~~~y~~~a~~y~~~~~~----~~~~~----~~~l--~~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~ 154 (377)
.+.+.++|+..+..|...+.. ..+.+ ...+ ..+.++.+|||||||+|.++.. .+..+|+|+|+|+.+
T Consensus 20 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~ 99 (298)
T 1ri5_A 20 KEEIREHYNSIRERGRESRQRSKTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVS 99 (298)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHH
T ss_pred HHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHH
Confidence 446677788777666543322 11111 1111 2357889999999999987532 344599999999999
Q ss_pred HHHHHHc--------CCeEEEeeCCCCCC-CCCceeEEEeccchhhc-CChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 155 IKICVDR--------GHEVLVADAVNLPY-RSDFGDAAISIAVLHHL-STESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 155 ~~~a~~~--------~~~~~~~d~~~~~~-~~~~fD~V~~~~~l~h~-~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++.|+++ ++.++++|+.++++ ++++||+|++..++||+ .+.+++..+|+++.++|||||.+++.+++.
T Consensus 100 ~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 100 INDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp HHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 9999876 26889999999887 68899999999999884 333448899999999999999999998764
No 53
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.72 E-value=8.5e-18 Score=157.56 Aligned_cols=97 Identities=19% Similarity=0.244 Sum_probs=86.4
Q ss_pred CCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc---------CCeEEEeeCCCCCCCC------Cce
Q 017080 121 PSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR---------GHEVLVADAVNLPYRS------DFG 180 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~~d~~~~~~~~------~~f 180 (377)
.++.+|||||||+|.++. . .++.+|+|+|+|+.+++.|+++ +++++++|++++++++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 578899999999999753 2 4788999999999999999874 6889999999988777 899
Q ss_pred eEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 181 DAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 181 D~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
|+|++..++||+ + +..+++++.++|||||.+++..+.
T Consensus 115 D~V~~~~~l~~~-~---~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 115 DMITAVECAHWF-D---FEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEESCGGGS-C---HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEeHhhHHHHh-C---HHHHHHHHHHhcCCCcEEEEEecC
Confidence 999999999999 7 899999999999999999996543
No 54
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.72 E-value=7.4e-18 Score=152.51 Aligned_cols=126 Identities=23% Similarity=0.388 Sum_probs=95.3
Q ss_pred HHhhCccccccc-ccchHHHHHH-HhCCCCCCEEEEECCccCccccc-CCCceEEEEeCCHHHHHHHHHc------CCeE
Q 017080 95 YDAIAPHFSSTR-FAKWPKVATF-LNSLPSGSLVLDAGCGNGKYLGL-NPDCFFVGCDISPSLIKICVDR------GHEV 165 (377)
Q Consensus 95 y~~~a~~y~~~~-~~~~~~~~~~-l~~~~~~~~vLDiGcG~G~~~~~-~~~~~v~gvD~s~~~~~~a~~~------~~~~ 165 (377)
|+..+..|+... ...+...... +..++++.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ ++++
T Consensus 4 y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~ 83 (243)
T 3d2l_A 4 YEQFAYVYDELMQDVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDF 83 (243)
T ss_dssp --CTTHHHHHHTTTCCHHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEE
Confidence 555555555411 1222333332 33456789999999999997642 1118999999999999999875 5899
Q ss_pred EEeeCCCCCCCCCceeEEEecc-chhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 166 LVADAVNLPYRSDFGDAAISIA-VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 166 ~~~d~~~~~~~~~~fD~V~~~~-~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.++|+.+++++ ++||+|++.. +++|+.+.+++..+++++.++|||||.+++..++
T Consensus 84 ~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 84 WVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 99999988765 8899999987 9999977666889999999999999999997654
No 55
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.71 E-value=2.9e-17 Score=152.77 Aligned_cols=148 Identities=17% Similarity=0.191 Sum_probs=105.5
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++.+..+|+.+++ ++||+|++..+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~ 138 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGA 138 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCc
Confidence 46788999999999987532 2356999999999999999875 5788999998765 88999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccch--HHHHhhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLT--QKYVEEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
++|+++.+ +..+++++.++|||||.+++.++........ .....+.. ......|.... ........+.+++.++
T Consensus 139 l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~ 214 (287)
T 1kpg_A 139 FEHFGHER-YDAFFSLAHRLLPADGVMLLHTITGLHPKEI-HERGLPMSFTFARFLKFIVTE--IFPGGRLPSIPMVQEC 214 (287)
T ss_dssp GGGTCTTT-HHHHHHHHHHHSCTTCEEEEEEEEECCHHHH-TTTTCSCHHHHHHHHHHHHHH--TSTTCCCCCHHHHHHH
T ss_pred hhhcChHH-HHHHHHHHHHhcCCCCEEEEEEecCCCcccc-ccccccccccccchhhhHHhe--eCCCCCCCCHHHHHHH
Confidence 99995322 8899999999999999999998765432210 00000000 00011111100 0111245688999999
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
++++||++
T Consensus 215 l~~aGf~~ 222 (287)
T 1kpg_A 215 ASANGFTV 222 (287)
T ss_dssp HHTTTCEE
T ss_pred HHhCCcEE
Confidence 99999977
No 56
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.71 E-value=4.9e-18 Score=159.21 Aligned_cols=100 Identities=13% Similarity=0.162 Sum_probs=83.6
Q ss_pred CCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----------CCeEEEeeCCCCCCCCCceeEEEec-cc
Q 017080 122 SGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----------GHEVLVADAVNLPYRSDFGDAAISI-AV 188 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~V~~~-~~ 188 (377)
++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.|+++ +++++++|+.++++ +++||+|++. .+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 345999999999998642 3478999999999999999875 37899999999887 7899999976 55
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
++|++. ++...+|++++++|||||.+++.+++..
T Consensus 161 ~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 161 INELDE-ADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp HTTSCH-HHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred cccCCH-HHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 666653 3378999999999999999999987754
No 57
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.71 E-value=3.2e-17 Score=145.92 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=101.6
Q ss_pred hHHHHHHHHHhhCcccccccccc---hHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc
Q 017080 87 EKKYVHRVYDAIAPHFSSTRFAK---WPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 87 ~~~~~~~~y~~~a~~y~~~~~~~---~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
..+.+++.|....++........ ...++..+....++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++
T Consensus 13 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 92 (216)
T 3ofk_A 13 TYQSLERELANDDPWRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQR 92 (216)
T ss_dssp HHHHHHHHHTSSSGGGTTTCHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHhcCCCCcccccCHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh
Confidence 45667777765433222111111 222333334456678999999999997642 3346999999999999999987
Q ss_pred -----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 162 -----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 162 -----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++++++|+.+++ ++++||+|++..+++|+++.+....+++++.++|||||.+++.++.
T Consensus 93 ~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 93 TKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp TTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 4789999999987 6889999999999999998554578899999999999999998764
No 58
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.71 E-value=7.2e-18 Score=152.19 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=87.6
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEe-ccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAIS-IAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~-~~~l~h~~~ 194 (377)
++++.+|||||||+|.++.. ..+.+++|+|+|+.+++.++++ ++++..+|+.++++ +++||+|+| ..+++|+++
T Consensus 38 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 38 TPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred cCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 36778999999999997642 1223899999999999999987 68999999999877 789999996 459999987
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
.+++..+|+++.++|||||.+++.++...
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 65588999999999999999999876543
No 59
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.71 E-value=3.8e-17 Score=153.34 Aligned_cols=146 Identities=16% Similarity=0.242 Sum_probs=106.5
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++++..+|+.++ +++||+|++..+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~ 146 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGA 146 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESC
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcch
Confidence 56888999999999997632 2248999999999999999876 477999999876 789999999999
Q ss_pred hhhcCCh------HHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccc-cch----HHHHhhhhCCCCCCcCCCCC
Q 017080 189 LHHLSTE------SRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWT-PLT----QKYVEEWIGPGSPRVRSPSA 257 (377)
Q Consensus 189 l~h~~~~------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~-~~~----~~~~~~w~~~~~~~~~~~~~ 257 (377)
++|++++ +....+++++.++|||||.+++.++.............. ... ..+......+ ....
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~ 220 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP------GGRL 220 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT------TCCC
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC------CCCC
Confidence 9999763 335899999999999999999998775433211100000 000 0111111111 1235
Q ss_pred CCcccHHhHhhcCCCcc
Q 017080 258 RTLESIPETEDNGSEEQ 274 (377)
Q Consensus 258 ~~~~~l~~~l~~aGF~~ 274 (377)
.+.+++.++++++||++
T Consensus 221 ~s~~~~~~~l~~aGf~~ 237 (302)
T 3hem_A 221 PRISQVDYYSSNAGWKV 237 (302)
T ss_dssp CCHHHHHHHHHHHTCEE
T ss_pred CCHHHHHHHHHhCCcEE
Confidence 66889999999999976
No 60
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.71 E-value=1.9e-17 Score=141.74 Aligned_cols=124 Identities=17% Similarity=0.170 Sum_probs=100.8
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
+.++.+|||+|||+|.++.. ..+.+++|+|+|+.+++.++++ ++++..+| +++++++||+|++..+++|+++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~- 90 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMDD- 90 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCSC-
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcccC-
Confidence 46778999999999997642 2224999999999999999987 78888888 6677899999999999999998
Q ss_pred HHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 196 SRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
+..+++++.++|||||.+++.++....... .......++.+++.++++ ||++
T Consensus 91 --~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~--Gf~~ 142 (170)
T 3i9f_A 91 --KQHVISEVKRILKDDGRVIIIDWRKENTGI-----------------------GPPLSIRMDEKDYMGWFS--NFVV 142 (170)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----------------------SSCGGGCCCHHHHHHHTT--TEEE
T ss_pred --HHHHHHHHHHhcCCCCEEEEEEcCcccccc-----------------------CchHhhhcCHHHHHHHHh--CcEE
Confidence 889999999999999999999876542110 001123467889999999 9965
No 61
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.70 E-value=3.9e-17 Score=149.68 Aligned_cols=134 Identities=15% Similarity=0.124 Sum_probs=101.0
Q ss_pred CCCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc----C-------------------------------
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR----G------------------------------- 162 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~----~------------------------------- 162 (377)
.++.+|||||||+|.++.. ..+. +|+|+|+|+.+++.++++ +
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4678999999999997643 3344 999999999999999765 2
Q ss_pred -C-eEEEeeCCCCC-CCC---CceeEEEeccchhhcCCh-HHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhcccc
Q 017080 163 -H-EVLVADAVNLP-YRS---DFGDAAISIAVLHHLSTE-SRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTP 235 (377)
Q Consensus 163 -~-~~~~~d~~~~~-~~~---~~fD~V~~~~~l~h~~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 235 (377)
+ .+.++|+.+.+ +++ ++||+|++..+++|+... .++..+|+++.++|||||++++.++.....
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~---------- 204 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY---------- 204 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE----------
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce----------
Confidence 5 88999998854 355 899999999999965432 238899999999999999999998543210
Q ss_pred chHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 236 LTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 236 ~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
+.. .........++.+++.++|+++||++
T Consensus 205 ---------~~~-~~~~~~~~~~~~~~~~~~l~~aGf~~ 233 (265)
T 2i62_A 205 ---------YMI-GEQKFSSLPLGWETVRDAVEEAGYTI 233 (265)
T ss_dssp ---------EEE-TTEEEECCCCCHHHHHHHHHHTTCEE
T ss_pred ---------EEc-CCccccccccCHHHHHHHHHHCCCEE
Confidence 000 00011233567779999999999976
No 62
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.69 E-value=1.4e-16 Score=147.16 Aligned_cols=151 Identities=13% Similarity=0.167 Sum_probs=107.2
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHH------HHHHHHHc--------CCeEEEee---CCCCCCC
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPS------LIKICVDR--------GHEVLVAD---AVNLPYR 176 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~------~~~~a~~~--------~~~~~~~d---~~~~~~~ 176 (377)
.+.++.+|||||||+|.++. . .+..+|+|+|+|+. +++.++++ ++++..+| ...++++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 35788999999999999753 2 36689999999997 88888765 47888888 4456677
Q ss_pred CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhc-cccchHHHHhhhhCCCCCCcCCC
Q 017080 177 SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTK-WTPLTQKYVEEWIGPGSPRVRSP 255 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~~~~~~~ 255 (377)
+++||+|++..+++|+++ +..+++.+.++++|||.+++.++............ +........... .. .......
T Consensus 120 ~~~fD~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 194 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAI-AP-SDVANIR 194 (275)
T ss_dssp TCCCSEEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHH-SC-CTTCSCC
T ss_pred CCCEEEEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhc-cc-ccccccc
Confidence 899999999999999999 66777777777788999999988764332111110 000111111111 11 1122234
Q ss_pred CCCCcccHHhHhhcCCCcc
Q 017080 256 SARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 256 ~~~~~~~l~~~l~~aGF~~ 274 (377)
..++.+++.++++++||++
T Consensus 195 ~~~s~~~l~~~l~~aGf~~ 213 (275)
T 3bkx_A 195 TLITPDTLAQIAHDNTWTY 213 (275)
T ss_dssp CCCCHHHHHHHHHHHTCEE
T ss_pred ccCCHHHHHHHHHHCCCee
Confidence 5788999999999999988
No 63
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.68 E-value=6.1e-17 Score=144.11 Aligned_cols=117 Identities=20% Similarity=0.235 Sum_probs=98.4
Q ss_pred HHHHHHhCCCCCCEEEEECCccCcccccCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhh
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h 191 (377)
.+...+....++.+|||||||+|.++... ..+++|+|+|+. ++.+.++|+.++++++++||+|++..++||
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l-~~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSI-RNPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHC-CSCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHh-hccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 45666666677889999999999987544 379999999998 588999999999888899999999999975
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCC
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGS 271 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aG 271 (377)
.+ +..+++++.++|+|||.+++.++... ..+.+++.++++++|
T Consensus 128 -~~---~~~~l~~~~~~L~~gG~l~i~~~~~~---------------------------------~~~~~~~~~~l~~~G 170 (215)
T 2zfu_A 128 -TN---IRDFLEEANRVLKPGGLLKVAEVSSR---------------------------------FEDVRTFLRAVTKLG 170 (215)
T ss_dssp -SC---HHHHHHHHHHHEEEEEEEEEEECGGG---------------------------------CSCHHHHHHHHHHTT
T ss_pred -cC---HHHHHHHHHHhCCCCeEEEEEEcCCC---------------------------------CCCHHHHHHHHHHCC
Confidence 66 88999999999999999999875421 115678999999999
Q ss_pred Ccc
Q 017080 272 EEQ 274 (377)
Q Consensus 272 F~~ 274 (377)
|++
T Consensus 171 f~~ 173 (215)
T 2zfu_A 171 FKI 173 (215)
T ss_dssp EEE
T ss_pred CEE
Confidence 966
No 64
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.68 E-value=2.2e-16 Score=139.82 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=105.1
Q ss_pred hhHHHHHHHHHhhCcccccccccchHHHHHHHh-CCCCCCEEEEECCccCccccc--CCC-ceEEEEeCCHHHHHHHHHc
Q 017080 86 LEKKYVHRVYDAIAPHFSSTRFAKWPKVATFLN-SLPSGSLVLDAGCGNGKYLGL--NPD-CFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 86 ~~~~~~~~~y~~~a~~y~~~~~~~~~~~~~~l~-~~~~~~~vLDiGcG~G~~~~~--~~~-~~v~gvD~s~~~~~~a~~~ 161 (377)
..++++.+.|...........+.....+...+. .+.++.+|||+|||+|.++.. ..+ .+|+|+|+|+.+++.++++
T Consensus 5 ~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~ 84 (215)
T 2pxx_A 5 REVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQAC 84 (215)
T ss_dssp GCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHH
T ss_pred cchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHh
Confidence 346778888766542211223334455555554 357788999999999997532 112 2899999999999999986
Q ss_pred -----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC------------hHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 162 -----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST------------ESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 162 -----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~------------~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++.+.++|+.++++++++||+|++..+++|+.. ..++..+++++.++|||||.+++.++..
T Consensus 85 ~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 85 YAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 589999999998888899999999999988761 2237899999999999999999998764
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.67 E-value=1e-16 Score=149.96 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=101.7
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------------------------------
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR----------------------------------- 161 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~----------------------------------- 161 (377)
.++.+|||||||+|.++. ..++.+|+|+|+|+.+++.|+++
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 367899999999999753 36778999999999999999875
Q ss_pred ------------------------------CCeEEEeeCCCCC-----CCCCceeEEEeccchhhcC---ChHHHHHHHH
Q 017080 162 ------------------------------GHEVLVADAVNLP-----YRSDFGDAAISIAVLHHLS---TESRRKKAIE 203 (377)
Q Consensus 162 ------------------------------~~~~~~~d~~~~~-----~~~~~fD~V~~~~~l~h~~---~~~~~~~~l~ 203 (377)
++.|.++|+...+ +.+++||+|+|..+++|+. +.+.+.++++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 4778888887644 5678999999999998884 3333889999
Q ss_pred HHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhc--CCCccc
Q 017080 204 ELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDN--GSEEQG 275 (377)
Q Consensus 204 ~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~--aGF~~~ 275 (377)
+++++|||||+|++....... . .............+. ...+.++++.++|.+ +||+..
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~----y-~~~~~~~~~~~~~~~---------~~~~~p~~~~~~L~~~~~GF~~~ 264 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSS----Y-GKRKTLTETIYKNYY---------RIQLKPEQFSSYLTSPDVGFSSY 264 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHH----H-HTTTTSCHHHHHHHH---------HCCCCGGGHHHHHTSTTTCCCEE
T ss_pred HHHHHhCCCcEEEEecCCchh----h-hhhhcccHHHHhhhh---------cEEEcHHHHHHHHHhcCCCceEE
Confidence 999999999999987533211 0 000011111111111 112346889999999 999763
No 66
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=9.2e-17 Score=145.85 Aligned_cols=154 Identities=18% Similarity=0.108 Sum_probs=106.8
Q ss_pred HHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----CCeEEEeeCCCCCCCC-----Ccee
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----GHEVLVADAVNLPYRS-----DFGD 181 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~-----~~fD 181 (377)
+..++..+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+.+++... .+||
T Consensus 47 ~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 47 LPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp HHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred HHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCcc
Confidence 334445567888999999999997642 2233899999999999999886 6889999998865322 3499
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccch--hhhhccccchHHHHhhhhCCCCCCcCCCCCCC
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDK--SLVTKWTPLTQKYVEEWIGPGSPRVRSPSART 259 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 259 (377)
+|++..+++|++..+ +..+++++.++|||||.+++.++....... .+........ ......+.. ......++
T Consensus 127 ~v~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~ 200 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEK-RELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLP-YELLLVMEH----GIRPGIFT 200 (245)
T ss_dssp EEEEESSSTTSCGGG-HHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCC-HHHHHHHTT----TCCCCCCC
T ss_pred EEEEcchhhcCCHHH-HHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCc-hhhhhcccc----CCCCCccC
Confidence 999999999998433 889999999999999999999886542110 0000000000 011111111 11123467
Q ss_pred cccHHhHhhcCCCcc
Q 017080 260 LESIPETEDNGSEEQ 274 (377)
Q Consensus 260 ~~~l~~~l~~aGF~~ 274 (377)
.+++.+++ +||++
T Consensus 201 ~~~~~~~~--aGf~~ 213 (245)
T 3ggd_A 201 AEDIELYF--PDFEI 213 (245)
T ss_dssp HHHHHHHC--TTEEE
T ss_pred HHHHHHHh--CCCEE
Confidence 88999999 99987
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=2.8e-16 Score=136.70 Aligned_cols=121 Identities=23% Similarity=0.309 Sum_probs=101.8
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEec-cchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISI-AVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~-~~l~h~~~ 194 (377)
++++.+|||+|||+|.++.. ..+.+++|+|+|+.+++.++++ ++.+..+|+.++++++++||+|++. .+++|++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh
Confidence 46788999999999997532 2367999999999999999987 6899999999988888999999998 78888865
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
++ ...+++++.++|+|||.+++...... .++.+++.++++++||.+
T Consensus 124 ~~-~~~~l~~~~~~l~~~G~l~~~~~~~~---------------------------------~~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 124 DG-REPALANIHRALGADGRAVIGFGAGR---------------------------------GWVFGDFLEVAERVGLEL 169 (195)
T ss_dssp HH-HHHHHHHHHHHEEEEEEEEEEEETTS---------------------------------SCCHHHHHHHHHHHTEEE
T ss_pred HH-HHHHHHHHHHHhCCCCEEEEEeCCCC---------------------------------CcCHHHHHHHHHHcCCEE
Confidence 33 78999999999999999999864321 145677889999999976
No 68
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.67 E-value=1.4e-16 Score=140.32 Aligned_cols=137 Identities=17% Similarity=0.184 Sum_probs=104.2
Q ss_pred HHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
+..++..++++ +|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++.+.++|+.++++++++||+|+
T Consensus 21 l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 99 (202)
T 2kw5_A 21 LVSVANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIV 99 (202)
T ss_dssp HHHHHHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEE
T ss_pred HHHHHHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEE
Confidence 33444456677 999999999997642 3467999999999999999876 57889999999888889999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHH
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIP 264 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~ 264 (377)
+. +.|++. +++..+++++.++|||||.+++.++....... .. .........++.+++.
T Consensus 100 ~~--~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~l~ 157 (202)
T 2kw5_A 100 SI--FCHLPS-SLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY------------------NT-GGPKDLDLLPKLETLQ 157 (202)
T ss_dssp EE--CCCCCH-HHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG------------------TS-CCSSSGGGCCCHHHHH
T ss_pred EE--hhcCCH-HHHHHHHHHHHHhcCCCcEEEEEEeccccccC------------------CC-CCCCcceeecCHHHHH
Confidence 95 345532 33889999999999999999999876542110 00 0111224568889999
Q ss_pred hHhhcCCCcc
Q 017080 265 ETEDNGSEEQ 274 (377)
Q Consensus 265 ~~l~~aGF~~ 274 (377)
++++ ||++
T Consensus 158 ~~l~--Gf~v 165 (202)
T 2kw5_A 158 SELP--SLNW 165 (202)
T ss_dssp HHCS--SSCE
T ss_pred HHhc--CceE
Confidence 9999 9977
No 69
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.66 E-value=6.9e-16 Score=135.02 Aligned_cols=137 Identities=21% Similarity=0.171 Sum_probs=105.0
Q ss_pred HHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCcee
Q 017080 111 PKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGD 181 (377)
Q Consensus 111 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD 181 (377)
..+...+.. .++.+|||+|||+|.++.. ..+.+++|+|+|+.+++.++++ ++++..+|+.++++ +++||
T Consensus 22 ~~l~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 22 SEVLEAVKV-VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHHHHHTTT-SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEE
T ss_pred HHHHHHhhc-cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCce
Confidence 345555543 4567999999999997532 2367999999999999998875 57899999999887 88999
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcc
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLE 261 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 261 (377)
+|++..+++|++.++ +..+++++.++|||||.+++.++..... + .........++.+
T Consensus 100 ~v~~~~~l~~~~~~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~------------------~----~~~~~~~~~~~~~ 156 (199)
T 2xvm_A 100 FILSTVVLMFLEAKT-IPGLIANMQRCTKPGGYNLIVAAMDTAD------------------Y----PCTVGFPFAFKEG 156 (199)
T ss_dssp EEEEESCGGGSCGGG-HHHHHHHHHHTEEEEEEEEEEEEBCCSS------------------S----CCCSCCSCCBCTT
T ss_pred EEEEcchhhhCCHHH-HHHHHHHHHHhcCCCeEEEEEEeeccCC------------------c----CCCCCCCCccCHH
Confidence 999999999998433 8899999999999999988876543211 0 0011223456888
Q ss_pred cHHhHhhcCCCcc
Q 017080 262 SIPETEDNGSEEQ 274 (377)
Q Consensus 262 ~l~~~l~~aGF~~ 274 (377)
++.+++++ |++
T Consensus 157 ~l~~~~~~--f~~ 167 (199)
T 2xvm_A 157 ELRRYYEG--WER 167 (199)
T ss_dssp HHHHHTTT--SEE
T ss_pred HHHHHhcC--CeE
Confidence 99999986 855
No 70
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.66 E-value=2e-16 Score=147.48 Aligned_cols=103 Identities=22% Similarity=0.293 Sum_probs=88.4
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCCCC---CCCCceeEE
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVNLP---YRSDFGDAA 183 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~~~---~~~~~fD~V 183 (377)
..++.+|||||||+|.++.. ..+.+|+|+|+|+.|++.|+++ ++.+..+|+..++ +++++||+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 35678999999999997642 3366999999999999999763 5778999998877 788999999
Q ss_pred Eec-cchhhcCC----hHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 184 ISI-AVLHHLST----ESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 184 ~~~-~~l~h~~~----~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++. .+++|+++ .+++..++++++++|||||++++..++.
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 998 89999998 4448899999999999999999998653
No 71
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=8.8e-17 Score=143.88 Aligned_cols=104 Identities=25% Similarity=0.339 Sum_probs=86.1
Q ss_pred hCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 118 NSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
..++++.+|||+|||+|.++.. ..+.+++|+|+|+.+++.++++ +++++.+|+.++++++++||+|++..++
T Consensus 34 ~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 34 KYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp HSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCG
T ss_pred HhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCch
Confidence 3456688999999999997532 2234999999999999998875 5899999999988888999999999995
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++....+ +..+++++.++|||||.+++.+++.
T Consensus 114 ~~~~~~~-~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 114 VHFEPLE-LNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp GGCCHHH-HHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HhCCHHH-HHHHHHHHHHHcCCCcEEEEEecCh
Confidence 5443322 7899999999999999999998753
No 72
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.66 E-value=2.9e-16 Score=148.36 Aligned_cols=148 Identities=16% Similarity=0.193 Sum_probs=105.7
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. ..+++|+|+|+|+.+++.++++ ++++..+|+.+++ ++||+|++..+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~ 164 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEA 164 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeCh
Confidence 46788999999999997532 2267999999999999999876 3788999998774 78999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccc--hHHHHhhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPL--TQKYVEEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
++|+++++ +..+++++.++|||||.+++.++........ .....+. .......|.... ........+.+++.++
T Consensus 165 l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~ 240 (318)
T 2fk8_A 165 FEHFGHEN-YDDFFKRCFNIMPADGRMTVQSSVSYHPYEM-AARGKKLSFETARFIKFIVTE--IFPGGRLPSTEMMVEH 240 (318)
T ss_dssp GGGTCGGG-HHHHHHHHHHHSCTTCEEEEEEEECCCHHHH-HTTCHHHHHHHHHHHHHHHHH--TSTTCCCCCHHHHHHH
T ss_pred HHhcCHHH-HHHHHHHHHHhcCCCcEEEEEEeccCCchhh-hhccccccccccchhhHHHHh--cCCCCcCCCHHHHHHH
Confidence 99996433 8999999999999999999998875432110 0000000 000011121100 0011244588999999
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
++++||++
T Consensus 241 l~~aGf~~ 248 (318)
T 2fk8_A 241 GEKAGFTV 248 (318)
T ss_dssp HHHTTCBC
T ss_pred HHhCCCEE
Confidence 99999976
No 73
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.66 E-value=9.5e-16 Score=142.06 Aligned_cols=169 Identities=21% Similarity=0.175 Sum_probs=114.5
Q ss_pred HHHHHhhCcccccccc---cchHHHHHHHhCCCCCCEEEEECCcc---Ccccc----cCCCceEEEEeCCHHHHHHHHHc
Q 017080 92 HRVYDAIAPHFSSTRF---AKWPKVATFLNSLPSGSLVLDAGCGN---GKYLG----LNPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 92 ~~~y~~~a~~y~~~~~---~~~~~~~~~l~~~~~~~~vLDiGcG~---G~~~~----~~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
.+.|.+..+.|..... ....++...+.......+|||||||+ |.++. ..|+.+|+|+|+|+.|++.|+++
T Consensus 44 ~~~~~~~~p~~~~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~ 123 (274)
T 2qe6_A 44 ADYACKHIPGLKESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRAL 123 (274)
T ss_dssp HHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHhcchhHHHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHh
Confidence 3446666665543111 11123333343223447999999999 98643 36889999999999999999876
Q ss_pred -----CCeEEEeeCCCCC-----------CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCcc
Q 017080 162 -----GHEVLVADAVNLP-----------YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQE 225 (377)
Q Consensus 162 -----~~~~~~~d~~~~~-----------~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 225 (377)
+++++.+|+.+.+ ++.++||+|++..++||+++.+ +..+|++++++|||||+|++.++....
T Consensus 124 ~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~-~~~~l~~~~~~L~pGG~l~i~~~~~~~- 201 (274)
T 2qe6_A 124 LAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDV-VDRVVGAYRDALAPGSYLFMTSLVDTG- 201 (274)
T ss_dssp HTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTT-HHHHHHHHHHHSCTTCEEEEEEEBCSS-
T ss_pred cCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHH-HHHHHHHHHHhCCCCcEEEEEEecCcc-
Confidence 5789999997631 2335899999999999999864 789999999999999999999876532
Q ss_pred chhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcccc
Q 017080 226 DKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQGK 276 (377)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~~~ 276 (377)
... .. .....+... . .....++.+++.+++ +||++.+
T Consensus 202 ~~~-~~---~~~~~~~~~-~-------~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 202 LPA-QQ---KLARITREN-L-------GEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp CHH-HH---HHHHHHHHH-H-------SCCCCBCHHHHHHTT--TTCEECT
T ss_pred hHH-HH---HHHHHHHhc-C-------CCCccCCHHHHHHHh--CCCeEcc
Confidence 111 01 011111110 0 013457889999999 5996633
No 74
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.65 E-value=6e-16 Score=149.12 Aligned_cols=145 Identities=15% Similarity=0.106 Sum_probs=106.4
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC--CCCCCceeEEEec
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL--PYRSDFGDAAISI 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~--~~~~~~fD~V~~~ 186 (377)
.++.+|||||||+|.++. ..|+.+++++|+ +.+++.|+++ +++++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 356799999999999763 378999999999 9999999875 488999999885 465 789999999
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
.++||+++++ ...+|++++++|||||+++|.++...................++ +.. .......++.++|.++
T Consensus 256 ~vlh~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~t~~e~~~l 328 (363)
T 3dp7_A 256 QFLDCFSEEE-VISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYF--TAM----ANGNSKMFHSDDLIRC 328 (363)
T ss_dssp SCSTTSCHHH-HHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHH--HHS----SCSSCCSCCHHHHHHH
T ss_pred chhhhCCHHH-HHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhH--Hhh----hCCCCcccCHHHHHHH
Confidence 9999998854 67899999999999999999986654321110000000000000 001 1112345688999999
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
|+++||++
T Consensus 329 l~~AGf~~ 336 (363)
T 3dp7_A 329 IENAGLEV 336 (363)
T ss_dssp HHTTTEEE
T ss_pred HHHcCCeE
Confidence 99999966
No 75
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=6.5e-16 Score=141.77 Aligned_cols=100 Identities=27% Similarity=0.378 Sum_probs=86.5
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcC-CeEEEeeCCCCCCCCCceeEEEeccchhhc-CCh
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRG-HEVLVADAVNLPYRSDFGDAAISIAVLHHL-STE 195 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~-~~~ 195 (377)
++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++. ..+.++|+.++++++++||+|++..++.|+ ++
T Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~- 130 (260)
T 2avn_A 52 LKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN- 130 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC-
T ss_pred cCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc-
Confidence 34778999999999997642 34679999999999999999873 248999999999889999999999877776 66
Q ss_pred HHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 196 SRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+..+|+++.++|||||.+++.+++.
T Consensus 131 --~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 --KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred --HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 8899999999999999999998764
No 76
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=8.4e-16 Score=140.90 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=93.8
Q ss_pred HHHHhhCccccccccc----chHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcC-CeE
Q 017080 93 RVYDAIAPHFSSTRFA----KWPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRG-HEV 165 (377)
Q Consensus 93 ~~y~~~a~~y~~~~~~----~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~-~~~ 165 (377)
+.|+..+..|...... .+.+.......+.++.+|||||||+|.++.. ..+.+|+|+|+|+.|++.|+++. ..+
T Consensus 12 ~~wd~~a~~f~~~~~~~~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~ 91 (261)
T 3iv6_A 12 EAWELIGNQFWTIGRVAARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC 91 (261)
T ss_dssp HHHHTTTTHHHHTSCGGGSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC
T ss_pred hHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc
Confidence 5577777766543322 2322222223467889999999999997642 35779999999999999999872 124
Q ss_pred EEeeCCCCCC-----CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 166 LVADAVNLPY-----RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 166 ~~~d~~~~~~-----~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+..++.+++. .+++||+|++..+++|+..++ ...+++++.++| |||.++++...
T Consensus 92 v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~-~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 92 VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEE-ARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHH-HHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ceeeeeecccccccccCCCccEEEEhhhhHhCCHHH-HHHHHHHHHHhC-cCcEEEEEecc
Confidence 5566655443 257899999999999997654 788999999999 99999998754
No 77
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.63 E-value=3.4e-16 Score=147.04 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=81.3
Q ss_pred CCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc----C---------CeEEEeeC------CCC--CCC
Q 017080 121 PSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR----G---------HEVLVADA------VNL--PYR 176 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~----~---------~~~~~~d~------~~~--~~~ 176 (377)
+++.+|||||||+|..+. ...+.+|+|+|+|+.|++.|+++ + ++|.+.|+ +++ +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 457899999999997543 24457999999999999999876 2 34777877 322 356
Q ss_pred CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 177 SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+++||+|+|..++||+-+.++...+|++++++|||||++++.+++.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 7899999999999986432236899999999999999999998753
No 78
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.62 E-value=3.2e-15 Score=138.91 Aligned_cols=108 Identities=19% Similarity=0.160 Sum_probs=89.9
Q ss_pred HHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeE
Q 017080 111 PKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDA 182 (377)
Q Consensus 111 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~ 182 (377)
..+...+... ++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+.++++ +++||+
T Consensus 110 ~~~~~~~~~~-~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~ 187 (286)
T 3m70_A 110 GDVVDAAKII-SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDF 187 (286)
T ss_dssp HHHHHHHHHS-CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEE
T ss_pred HHHHHHhhcc-CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccE
Confidence 3444555444 678999999999997642 3367999999999999998876 57899999999876 889999
Q ss_pred EEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 183 AISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 183 V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
|++..+++|++++. ...+++++.++|||||.+++....
T Consensus 188 i~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 188 IVSTVVFMFLNRER-VPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp EEECSSGGGSCGGG-HHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEEccchhhCCHHH-HHHHHHHHHHhcCCCcEEEEEEec
Confidence 99999999997654 779999999999999998887654
No 79
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.62 E-value=1.9e-15 Score=143.71 Aligned_cols=136 Identities=18% Similarity=0.163 Sum_probs=103.1
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.++.+|||||||+|.++. ..|+.+++++|+ +.+++.++++ ++++..+|+. .+++. +||+|++..+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 346799999999999753 478899999999 9999999864 4889999997 34545 8999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhh
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETED 268 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~ 268 (377)
+||+++++ ..++|++++++|||||+++|.++..... .. ..+ ......... .....+.++|.++++
T Consensus 245 lh~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~--~~~---~d~~~~~~~--------~~~~~t~~e~~~ll~ 309 (332)
T 3i53_A 245 LHDWDDLS-AVAILRRCAEAAGSGGVVLVIEAVAGDE-HA--GTG---MDLRMLTYF--------GGKERSLAELGELAA 309 (332)
T ss_dssp GGGSCHHH-HHHHHHHHHHHHTTTCEEEEEECCCC----C--CHH---HHHHHHHHH--------SCCCCCHHHHHHHHH
T ss_pred hccCCHHH-HHHHHHHHHHhcCCCCEEEEEeecCCCC-Cc--cHH---HHHHHHhhC--------CCCCCCHHHHHHHHH
Confidence 99999854 6899999999999999999998765432 10 000 111110011 134567899999999
Q ss_pred cCCCcc
Q 017080 269 NGSEEQ 274 (377)
Q Consensus 269 ~aGF~~ 274 (377)
++||++
T Consensus 310 ~aGf~~ 315 (332)
T 3i53_A 310 QAGLAV 315 (332)
T ss_dssp HTTEEE
T ss_pred HCCCEE
Confidence 999966
No 80
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.61 E-value=3.3e-15 Score=143.59 Aligned_cols=143 Identities=13% Similarity=0.144 Sum_probs=106.9
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
+.++.+|||||||+|.++. ..|+.+++++|+ +.+++.++++ +++++.+|+.+.++++. |+|++..
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~ 264 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCR 264 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEES
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEec
Confidence 4677899999999999753 378889999999 9999999865 38899999998776544 9999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
++||+++++ ..++|++++++|||||++++.++....... +....+. .+............+++.++|.+++
T Consensus 265 vlh~~~d~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-------~~~~~~~-~~~~~~~~g~~~~~~~t~~e~~~ll 335 (359)
T 1x19_A 265 ILYSANEQL-STIMCKKAFDAMRSGGRLLILDMVIDDPEN-------PNFDYLS-HYILGAGMPFSVLGFKEQARYKEIL 335 (359)
T ss_dssp CGGGSCHHH-HHHHHHHHHTTCCTTCEEEEEEECCCCTTS-------CCHHHHH-HHGGGGGSSCCCCCCCCGGGHHHHH
T ss_pred hhccCCHHH-HHHHHHHHHHhcCCCCEEEEEecccCCCCC-------chHHHHH-HHHHhcCCCCcccCCCCHHHHHHHH
Confidence 999998754 789999999999999999998876543211 0111111 1111000011123458899999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 336 ~~aGf~~ 342 (359)
T 1x19_A 336 ESLGYKD 342 (359)
T ss_dssp HHHTCEE
T ss_pred HHCCCce
Confidence 9999966
No 81
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.61 E-value=1.7e-15 Score=146.08 Aligned_cols=144 Identities=13% Similarity=0.088 Sum_probs=104.6
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
+.+..+|||||||+|.++. .+|+.+++++|+ +.+++.+++. +++++.+|+.+ +++.+ |+|++..++||+++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSD 274 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCH
Confidence 5567899999999999753 479999999999 8898887765 69999999988 76654 99999999999987
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
++ ..++|++++++|||||+++|.+........................... ......+.++|.++++++||++
T Consensus 275 ~~-~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~------~~g~~rt~~e~~~ll~~AGF~~ 347 (364)
T 3p9c_A 275 QH-CATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHN------PGGRERYEREFQALARGAGFTG 347 (364)
T ss_dssp HH-HHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHC------SSCCCCBHHHHHHHHHHTTCCE
T ss_pred HH-HHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcc------cCCccCCHHHHHHHHHHCCCce
Confidence 54 7899999999999999999998765432111000000000000000000 0123457789999999999966
No 82
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.60 E-value=2e-15 Score=143.39 Aligned_cols=142 Identities=15% Similarity=0.194 Sum_probs=106.3
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.++.+|||||||+|.++. ..|+.+++++|+| .+++.++++ +++++.+|+.+.+++++ ||+|++..+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 567899999999999753 3688899999999 999998875 48899999988776554 999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhh
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETED 268 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~ 268 (377)
+||+++++ ...+|++++++|||||++++.++........ +........+... .......++.+++.++++
T Consensus 242 l~~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~t~~~~~~ll~ 311 (335)
T 2r3s_A 242 LHHFDVAT-CEQLLRKIKTALAVEGKVIVFDFIPNSDRIT------PPDAAAFSLVMLA---TTPNGDAYTFAEYESMFS 311 (335)
T ss_dssp GGGSCHHH-HHHHHHHHHHHEEEEEEEEEEECCCCTTSSC------SHHHHHHHHHHHH---HSSSCCCCCHHHHHHHHH
T ss_pred hccCCHHH-HHHHHHHHHHhCCCCcEEEEEeecCCCCcCC------chHHHHHHHHHHe---eCCCCCcCCHHHHHHHHH
Confidence 99997644 6899999999999999999998765432110 0011111111000 001235678899999999
Q ss_pred cCCCcc
Q 017080 269 NGSEEQ 274 (377)
Q Consensus 269 ~aGF~~ 274 (377)
++||++
T Consensus 312 ~aGf~~ 317 (335)
T 2r3s_A 312 NAGFSH 317 (335)
T ss_dssp HTTCSE
T ss_pred HCCCCe
Confidence 999966
No 83
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.60 E-value=1.2e-16 Score=144.64 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=80.5
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCC--CCCCCceeEEEe-cc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNL--PYRSDFGDAAIS-IA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~--~~~~~~fD~V~~-~~ 187 (377)
..++.+|||||||+|.++.. ....+|+|+|+|+.|++.|+++ ++.++++|+.++ ++++++||+|++ ..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 35778999999999997642 3344999999999999999886 377899999887 788999999999 55
Q ss_pred ch-hhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 188 VL-HHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 188 ~l-~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.+ .+......+..++++++++|||||++++.++.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 43 11222222668899999999999999987643
No 84
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.60 E-value=1.5e-15 Score=146.65 Aligned_cols=143 Identities=17% Similarity=0.160 Sum_probs=104.1
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
+.++.+|||||||+|.++. .+|+.+++++|+ +.+++.+++. +++++.+|+.+ +++++ |+|++..++||+++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 4567899999999999753 479999999999 9999888765 78999999987 66654 99999999999998
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCCCccchhh-hhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSL-VTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEE 273 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~ 273 (377)
++ ..++|++++++|||||+++|.++......... ..............+. ......+.++|.++++++||+
T Consensus 277 ~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~g~~rt~~e~~~ll~~AGF~ 348 (368)
T 3reo_A 277 EH-CLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYN-------PGGKERTEKEFQALAMASGFR 348 (368)
T ss_dssp HH-HHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHS-------SBCCCCCHHHHHHHHHHTTCC
T ss_pred HH-HHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhc-------CCCccCCHHHHHHHHHHCCCe
Confidence 54 67999999999999999999987654321110 0000000000000000 012345788999999999996
Q ss_pred c
Q 017080 274 Q 274 (377)
Q Consensus 274 ~ 274 (377)
+
T Consensus 349 ~ 349 (368)
T 3reo_A 349 G 349 (368)
T ss_dssp E
T ss_pred e
Confidence 5
No 85
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.60 E-value=3.8e-15 Score=143.85 Aligned_cols=139 Identities=13% Similarity=0.139 Sum_probs=105.3
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
..++.+|||||||+|.++. ..|+.+++++|+ +.+++.++++ ++++..+|+. .+++. .||+|++..
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKH 276 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEES
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhh
Confidence 4567899999999999753 478999999999 9999999864 5899999998 45555 899999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
++||+++++ ..++|++++++|||||+++|.++......... ..+. ....... ......+.++|.+++
T Consensus 277 vlh~~~d~~-~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~---d~~~~~~--------~~g~~~t~~e~~~ll 343 (369)
T 3gwz_A 277 VLHDWDDDD-VVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFV---DLLLLVL--------VGGAERSESEFAALL 343 (369)
T ss_dssp CGGGSCHHH-HHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHH---HHHHHHH--------HSCCCBCHHHHHHHH
T ss_pred hhccCCHHH-HHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHh---hHHHHhh--------cCCccCCHHHHHHHH
Confidence 999998844 45899999999999999999987654332111 1110 0000001 113456789999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 344 ~~aGf~~ 350 (369)
T 3gwz_A 344 EKSGLRV 350 (369)
T ss_dssp HTTTEEE
T ss_pred HHCCCeE
Confidence 9999966
No 86
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.58 E-value=6.7e-15 Score=151.31 Aligned_cols=100 Identities=19% Similarity=0.300 Sum_probs=86.6
Q ss_pred CCCCEEEEECCccCcccc----cC-CCceEEEEeCCHHHHHHHHHc-------------CCeEEEeeCCCCCCCCCceeE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LN-PDCFFVGCDISPSLIKICVDR-------------GHEVLVADAVNLPYRSDFGDA 182 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~-~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~ 182 (377)
.++.+|||||||+|.++. .. +..+|+|+|+|+.|++.|+++ +++++++|+.++++++++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 377899999999999763 23 447999999999999999871 478999999999998999999
Q ss_pred EEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 183 AISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 183 V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
|++..+++|+++.. ...+++++.++|||| .+++.+++.
T Consensus 800 VV~~eVLeHL~dp~-l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 800 GTCLEVIEHMEEDQ-ACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEESCGGGSCHHH-HHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEeCchhhCChHH-HHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999999999844 457999999999999 888888764
No 87
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.58 E-value=5.1e-15 Score=142.89 Aligned_cols=140 Identities=18% Similarity=0.182 Sum_probs=101.7
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
+.++.+|||||||+|.++. ..|+.+++++|+ +.+++.++++ +++++.+|+.+ +++. .||+|++..
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 4567899999999999753 378889999999 9999999875 58899999876 3444 499999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEc--CCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVW--AVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPE 265 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~ 265 (377)
++||+++.+ ...+|++++++|||||++++.++ ............ ........+. ....++.+++.+
T Consensus 257 vl~~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~~~~~~ 324 (374)
T 1qzz_A 257 VLLNWSDED-ALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFST---LLDLRMLTFM--------GGRVRTRDEVVD 324 (374)
T ss_dssp CGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEECCH-------HHHHH---HHHHHHHHHH--------SCCCCCHHHHHH
T ss_pred cccCCCHHH-HHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhh---hcchHHHHhC--------CCcCCCHHHHHH
Confidence 999998743 46999999999999999999987 432211111110 1111111111 134578899999
Q ss_pred HhhcCCCcc
Q 017080 266 TEDNGSEEQ 274 (377)
Q Consensus 266 ~l~~aGF~~ 274 (377)
+++++||++
T Consensus 325 ll~~aGf~~ 333 (374)
T 1qzz_A 325 LAGSAGLAL 333 (374)
T ss_dssp HHHTTTEEE
T ss_pred HHHHCCCce
Confidence 999999966
No 88
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.58 E-value=3.5e-15 Score=134.04 Aligned_cols=110 Identities=20% Similarity=0.231 Sum_probs=91.0
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeC-CCCCCC-CCceeEEEeccchhhcC
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--GHEVLVADA-VNLPYR-SDFGDAAISIAVLHHLS 193 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~-~~~~~~-~~~fD~V~~~~~l~h~~ 193 (377)
++++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+ ..+|++ +++||+|++. .
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~ 119 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------R 119 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------S
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------C
Confidence 56789999999999997632 2367999999999999999987 799999999 568887 8999999997 3
Q ss_pred ChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCc
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEE 273 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~ 273 (377)
+ +..+++++.++|||||.++.. ....+.+.+.++++++||.
T Consensus 120 ~---~~~~l~~~~~~LkpgG~l~~~------------------------------------~~~~~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 120 G---PTSVILRLPELAAPDAHFLYV------------------------------------GPRLNVPEVPERLAAVGWD 160 (226)
T ss_dssp C---CSGGGGGHHHHEEEEEEEEEE------------------------------------ESSSCCTHHHHHHHHTTCE
T ss_pred C---HHHHHHHHHHHcCCCcEEEEe------------------------------------CCcCCHHHHHHHHHHCCCe
Confidence 4 678999999999999999811 0123456788999999997
Q ss_pred c
Q 017080 274 Q 274 (377)
Q Consensus 274 ~ 274 (377)
+
T Consensus 161 ~ 161 (226)
T 3m33_A 161 I 161 (226)
T ss_dssp E
T ss_pred E
Confidence 6
No 89
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.58 E-value=4e-15 Score=142.53 Aligned_cols=142 Identities=15% Similarity=0.205 Sum_probs=104.4
Q ss_pred CCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCC-CCCCceeEEEeccch
Q 017080 123 GSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLP-YRSDFGDAAISIAVL 189 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~-~~~~~fD~V~~~~~l 189 (377)
+.+|||||||+|.++. ..|+.+++++|+ +.+++.++++ +++++.+|+.+.+ +..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 7899999999999753 478899999999 8898888764 4889999998865 235679999999999
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhc
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDN 269 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~ 269 (377)
||+++++ ...+|++++++|||||++++.++........ +....+...+... .......++.++|.+++++
T Consensus 259 h~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 259 HYFDARE-AREVIGHAAGLVKPGGALLILTMTMNDDRVT------PALSADFSLHMMV---NTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp GGSCHHH-HHHHHHHHHHTEEEEEEEEEEEECCCTTSSS------SHHHHHHHHHHHH---HSTTCCCCCHHHHHHHHHH
T ss_pred ccCCHHH-HHHHHHHHHHHcCCCCEEEEEEeccCCCCCC------CchHHHhhHHHHh---hCCCCCcCCHHHHHHHHHH
Confidence 9998744 6899999999999999999998765432110 0011111111000 0011234678999999999
Q ss_pred CCCccc
Q 017080 270 GSEEQG 275 (377)
Q Consensus 270 aGF~~~ 275 (377)
+||++.
T Consensus 329 aGf~~~ 334 (352)
T 3mcz_A 329 AGLAVG 334 (352)
T ss_dssp TTCEEE
T ss_pred CCCcee
Confidence 999763
No 90
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.57 E-value=1.6e-15 Score=130.75 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=93.4
Q ss_pred CCCCCCEEEEECCccCcccccCCCceEEEEeCCHHHHHHHHHc---CCeEEEeeCCCCCC---CCCceeEEEeccchhhc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGLNPDCFFVGCDISPSLIKICVDR---GHEVLVADAVNLPY---RSDFGDAAISIAVLHHL 192 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~~~~~~v~gvD~s~~~~~~a~~~---~~~~~~~d~~~~~~---~~~~fD~V~~~~~l~h~ 192 (377)
.+.+|.+|||||||+ +++|+|+.|++.|+++ ++++.++|+.++++ ++++||+|++..++||+
T Consensus 9 g~~~g~~vL~~~~g~------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~ 76 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGST 76 (176)
T ss_dssp TCCTTSEEEEEECTT------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCC
T ss_pred CCCCCCEEEEecCCc------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhc
Confidence 367899999999996 2399999999999987 58999999999887 78999999999999999
Q ss_pred -CChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCC
Q 017080 193 -STESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGS 271 (377)
Q Consensus 193 -~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aG 271 (377)
++ +..++++++|+|||||++++..+..... . . .....+.+++.++|+++|
T Consensus 77 ~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~--------------------~--~----~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 77 TLH---SAEILAEIARILRPGGCLFLKEPVETAV--------------------D--N----NSKVKTASKLCSALTLSG 127 (176)
T ss_dssp CCC---CHHHHHHHHHHEEEEEEEEEEEEEESSS--------------------C--S----SSSSCCHHHHHHHHHHTT
T ss_pred ccC---HHHHHHHHHHHCCCCEEEEEEccccccc--------------------c--c----ccccCCHHHHHHHHHHCC
Confidence 77 7899999999999999999965421100 0 0 111235688999999999
Q ss_pred Ccc
Q 017080 272 EEQ 274 (377)
Q Consensus 272 F~~ 274 (377)
| +
T Consensus 128 f-i 129 (176)
T 2ld4_A 128 L-V 129 (176)
T ss_dssp C-E
T ss_pred C-c
Confidence 9 5
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.57 E-value=9e-15 Score=137.83 Aligned_cols=103 Identities=22% Similarity=0.212 Sum_probs=86.1
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------------CCeEEEeeCCCCC----CC--
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------------GHEVLVADAVNLP----YR-- 176 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------------~~~~~~~d~~~~~----~~-- 176 (377)
++++.+|||||||+|.++.. .+..+++|+|+|+.|++.++++ ++.++++|+..++ ++
T Consensus 32 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 32 KKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp C--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred cCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 35778999999999997642 4677999999999999998875 3688999999875 53
Q ss_pred CCceeEEEeccchhhc-CChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 177 SDFGDAAISIAVLHHL-STESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~-~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+++||+|++..++||+ .+.+++..+|+++.++|||||.+++.+++.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 4599999999999998 665557899999999999999999998764
No 92
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.57 E-value=8.3e-15 Score=133.34 Aligned_cols=99 Identities=18% Similarity=0.280 Sum_probs=81.5
Q ss_pred CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEecc-chhh
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAISIA-VLHH 191 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~~~-~l~h 191 (377)
.++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.++++ ++.++++|+.+++++ ++||+|++.. .++|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 4678999999999997642 3477999999999999999875 588999999988764 6899999975 4555
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++ .+++..+++++.++|||||.+++..++
T Consensus 119 ~~-~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 119 FD-EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CC-HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 54 334889999999999999999987654
No 93
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.56 E-value=1.3e-14 Score=134.58 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=83.4
Q ss_pred HHhCCCCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
.+..+.++.+|||||||+|.++ ...++++|+|+|+|+.|++.|+++ +++++++|+.+++ +++||+|+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~ 193 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLM 193 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEE
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEE
Confidence 3567889999999999998653 336789999999999999999986 5789999998875 78999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+... +++ +.++++++.++|||||++++...
T Consensus 194 ~~a~---~~d---~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 194 VAAL---AEP---KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ECTT---CSC---HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ECCC---ccC---HHHHHHHHHHHcCCCcEEEEEcC
Confidence 8654 466 88999999999999999999864
No 94
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.56 E-value=4.1e-15 Score=143.70 Aligned_cols=143 Identities=19% Similarity=0.177 Sum_probs=102.7
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
++++.+|||||||+|.++. ..|+.+++++|+ +.+++.+++. +++++.+|+.+ +++. ||+|++..++||+++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d 282 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD 282 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCH
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEecccccCCH
Confidence 4567899999999999753 378889999999 9999888764 68999999987 6654 999999999999998
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
.+ ...+|++++++|||||+++|.++........... + ........+... ......++.++|.++++++||++
T Consensus 283 ~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~-~--~~~~~~d~~~~~----~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 283 EK-CIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEE-S--KLVSTLDNLMFI----TVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp HH-HHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHH-H--HHHHHHHHHHHH----HHSCCCEEHHHHHHHHHHTTCSE
T ss_pred HH-HHHHHHHHHHhcCCCCEEEEEEeccCCCCccchH-H--HHHHHhhHHHHh----ccCCccCCHHHHHHHHHHCCCce
Confidence 43 4599999999999999999997654322110000 0 000111111000 00123457889999999999966
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=2.2e-15 Score=136.43 Aligned_cols=96 Identities=14% Similarity=0.028 Sum_probs=78.7
Q ss_pred CCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCC--CCCCCceeEEEe----
Q 017080 121 PSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNL--PYRSDFGDAAIS---- 185 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~--~~~~~~fD~V~~---- 185 (377)
.+|.+|||||||+|..+.. ....+|+|||+|+.+++.|+++ +++++.+|+..+ ++++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 5788999999999987542 3346899999999999999986 366788887653 477899999974
Q ss_pred -ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 -IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 -~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...++|+++ +..++++++|+|||||++.+..
T Consensus 139 ~~~~~~~~~~---~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTHQ---FNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHH---HHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhcc---hhhhhhhhhheeCCCCEEEEEe
Confidence 556677777 8899999999999999998754
No 96
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.55 E-value=8.5e-15 Score=139.23 Aligned_cols=139 Identities=13% Similarity=0.120 Sum_probs=102.9
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
+.+ .+|||||||+|.++. ..|+.+++++|+ +.+++.++++ +++++.+|+.+ +++ ++||+|++..
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~ 241 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSR 241 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEES
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEch
Confidence 345 899999999999653 378889999999 9999988875 58899999987 554 6799999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHh
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETE 267 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l 267 (377)
++||+++++ ...++++++++|||||++++.+.............+ .......+.. ....+.++|.+++
T Consensus 242 vl~~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~---~~~~~~~~~~--------~~~~t~~e~~~ll 309 (334)
T 2ip2_A 242 IIGDLDEAA-SLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVL---WDVHLFMACA--------GRHRTTEEVVDLL 309 (334)
T ss_dssp CGGGCCHHH-HHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHH---HHHHHHHHHS--------CCCCBHHHHHHHH
T ss_pred hccCCCHHH-HHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHH---hhhHhHhhCC--------CcCCCHHHHHHHH
Confidence 999998744 569999999999999999999876432211100000 0100101111 2335789999999
Q ss_pred hcCCCcc
Q 017080 268 DNGSEEQ 274 (377)
Q Consensus 268 ~~aGF~~ 274 (377)
+++||++
T Consensus 310 ~~aGf~~ 316 (334)
T 2ip2_A 310 GRGGFAV 316 (334)
T ss_dssp HHTTEEE
T ss_pred HHCCCce
Confidence 9999966
No 97
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.55 E-value=1.3e-14 Score=139.32 Aligned_cols=140 Identities=15% Similarity=0.147 Sum_probs=103.2
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
+.++.+|||||||+|.++. ..++.+++++|+ +.+++.++++ +++++.+|+.+ +++. .||+|++..
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF 257 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc
Confidence 4567899999999999753 378889999999 9999988875 58899999876 3444 499999999
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcC-CCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA-VEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
++||+++++ ...++++++++|||||++++.++. ....... .+..........+. ....++.++|.++
T Consensus 258 vl~~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~t~~e~~~l 325 (360)
T 1tw3_A 258 VLLNWPDHD-AVRILTRCAEALEPGGRILIHERDDLHENSFN---EQFTELDLRMLVFL--------GGALRTREKWDGL 325 (360)
T ss_dssp CGGGSCHHH-HHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS---HHHHHHHHHHHHHH--------SCCCCBHHHHHHH
T ss_pred cccCCCHHH-HHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc---chhhhccHHHhhhc--------CCcCCCHHHHHHH
Confidence 999998743 468999999999999999999876 3321110 00000111110011 1345688999999
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
++++||++
T Consensus 326 l~~aGf~~ 333 (360)
T 1tw3_A 326 AASAGLVV 333 (360)
T ss_dssp HHHTTEEE
T ss_pred HHHCCCeE
Confidence 99999966
No 98
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=6.3e-15 Score=131.32 Aligned_cols=96 Identities=24% Similarity=0.291 Sum_probs=77.2
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHH----HHc-------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKIC----VDR-------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a----~~~-------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
+.++.+|||||||+|.++. ..|+.+|+|+|+|+.|++.+ +++ ++.++++|+.++++++++ |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 4678899999999999753 37789999999999988753 221 578999999999987766 7666
Q ss_pred ec---cch--hhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 185 SI---AVL--HHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~---~~l--~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.. ..+ +|+++ +..++++++++|||||.+++..
T Consensus 104 ~~~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGS---SPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EESCCHHHHHHHHTS---SSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccchhhhhhhhcc---HHHHHHHHHHHcCCCcEEEEEe
Confidence 32 333 37888 6899999999999999999964
No 99
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.54 E-value=9.5e-15 Score=139.89 Aligned_cols=139 Identities=18% Similarity=0.170 Sum_probs=98.7
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHH------cCCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVD------RGHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~------~~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
++++.+|||||||+|.++. ..|+.+++++|++ .++..++. .+++++.+|+. .+++ +||+|++..++
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vl 257 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRIL 257 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCG
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhc
Confidence 5677899999999999753 4788999999994 44442110 14889999996 3444 89999999999
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhc
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDN 269 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~ 269 (377)
||+++++ ..++|++++++|||||+++|.++......... .......+... .......+.++|.+++++
T Consensus 258 h~~~d~~-~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~-------~~~~~d~~~~~----~~~~~~~t~~e~~~ll~~ 325 (348)
T 3lst_A 258 HNWGDED-SVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH-------QSKEMDFMMLA----ARTGQERTAAELEPLFTA 325 (348)
T ss_dssp GGSCHHH-HHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC-------HHHHHHHHHHH----TTSCCCCBHHHHHHHHHH
T ss_pred cCCCHHH-HHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc-------hhhhcChhhhh----cCCCcCCCHHHHHHHHHH
Confidence 9999843 47999999999999999999987654321110 01111111100 011345678999999999
Q ss_pred CCCcc
Q 017080 270 GSEEQ 274 (377)
Q Consensus 270 aGF~~ 274 (377)
+||++
T Consensus 326 aGf~~ 330 (348)
T 3lst_A 326 AGLRL 330 (348)
T ss_dssp TTEEE
T ss_pred CCCce
Confidence 99966
No 100
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=2e-14 Score=124.63 Aligned_cols=104 Identities=22% Similarity=0.259 Sum_probs=78.2
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC-CCCCceeEEEecc-
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP-YRSDFGDAAISIA- 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~-~~~~~fD~V~~~~- 187 (377)
.++++.+|||+|||+|.++.. ..+.+|+|+|+|+.|++.|+++ ++++++.|+..++ +.+++||+|++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 457889999999999997532 2378999999999999999876 4688888877753 4578899998873
Q ss_pred chhh-----cCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 188 VLHH-----LSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 188 ~l~h-----~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
.+++ ....+....+++++.++|||||.+++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 3332 1122336789999999999999999988753
No 101
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.53 E-value=4.6e-14 Score=124.43 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=81.8
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.++++ +++++.+|+.+.....++||+|++..
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 45678899999999999753 36778999999999999999875 57889999976543447899999998
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++ + +..+++++.++|||||++++....
T Consensus 117 ~~~---~---~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 117 SGG---M---LEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CTT---C---HHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCc---C---HHHHHHHHHHhcCCCeEEEEEecc
Confidence 776 4 789999999999999999998654
No 102
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.52 E-value=2.6e-14 Score=131.00 Aligned_cols=139 Identities=19% Similarity=0.201 Sum_probs=100.3
Q ss_pred CCCEEEEECCccCc---cc---c-cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC----CC--CCcee
Q 017080 122 SGSLVLDAGCGNGK---YL---G-LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP----YR--SDFGD 181 (377)
Q Consensus 122 ~~~~vLDiGcG~G~---~~---~-~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~----~~--~~~fD 181 (377)
...+|||||||++. .. . ..|+++|+++|.|+.|++.|+++ ++.|+++|+.+++ .+ .+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 34699999999733 22 2 37899999999999999999886 3789999998852 11 34566
Q ss_pred -----EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCC
Q 017080 182 -----AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPS 256 (377)
Q Consensus 182 -----~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 256 (377)
.|+++.+|||+++.+++..+++++++.|+|||+|++++.......... ......+.... ....
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~--------~~~~~~~~~~g----~p~~ 225 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEV--------GRVAREYAARN----MPMR 225 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHH--------HHHHHHHHHTT----CCCC
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHH--------HHHHHHHHhcC----CCCc
Confidence 688999999999976568999999999999999999987654221110 11111121111 1246
Q ss_pred CCCcccHHhHhhcCCCcc
Q 017080 257 ARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 257 ~~~~~~l~~~l~~aGF~~ 274 (377)
+.+.+++.+++. ||+.
T Consensus 226 ~rs~~ei~~~f~--Glel 241 (277)
T 3giw_A 226 LRTHAEAEEFFE--GLEL 241 (277)
T ss_dssp CCCHHHHHHTTT--TSEE
T ss_pred cCCHHHHHHHhC--CCcc
Confidence 678899999995 9965
No 103
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.52 E-value=1.3e-14 Score=139.03 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=102.4
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
+.++.+|||||||+|.++. .+|+.+++++|+ +.+++.+++. +++++.+|+.+ +++. ||+|++..++||+++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTD 261 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCH
Confidence 3466899999999999753 378899999999 9999888764 68999999976 5543 999999999999988
Q ss_pred hHHHHHHHHHHHHcccc---CcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCC
Q 017080 195 ESRRKKAIEELVRVVKK---GSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGS 271 (377)
Q Consensus 195 ~~~~~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aG 271 (377)
.+ ..++|++++++||| ||+++|.++........ ..+. ........+... .. ....+.++|.++++++|
T Consensus 262 ~~-~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~--~~~~-~~~~~~d~~~~~----~~-g~~~t~~e~~~ll~~aG 332 (352)
T 1fp2_A 262 KD-CLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDE--NQVT-QIKLLMDVNMAC----LN-GKERNEEEWKKLFIEAG 332 (352)
T ss_dssp HH-HHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSC--HHHH-HHHHHHHHHGGG----GT-CCCEEHHHHHHHHHHTT
T ss_pred HH-HHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCc--cchh-hhHhhccHHHHh----cc-CCCCCHHHHHHHHHHCC
Confidence 43 45999999999999 99999998764322110 0000 001111111110 00 23457889999999999
Q ss_pred Ccc
Q 017080 272 EEQ 274 (377)
Q Consensus 272 F~~ 274 (377)
|++
T Consensus 333 f~~ 335 (352)
T 1fp2_A 333 FQH 335 (352)
T ss_dssp CCE
T ss_pred CCe
Confidence 966
No 104
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.52 E-value=2.3e-14 Score=128.89 Aligned_cols=98 Identities=13% Similarity=0.180 Sum_probs=79.7
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCC---CCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVN---LPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~---~~~~~~~fD~V~~ 185 (377)
.++||.+|||+|||+|.++. . .|...|+|+|+|+.|++.++++ |+..+.+|+.. .+...+++|+|++
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 36899999999999999753 2 6889999999999999988776 67788888865 3456789999986
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
. +.|..+ ...++.++.+.|||||.++++...
T Consensus 154 d--~~~~~~---~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 154 D--VAQPEQ---AAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp C--CCCTTH---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred e--ccCChh---HHHHHHHHHHhccCCCEEEEEEec
Confidence 4 333333 789999999999999999998643
No 105
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.51 E-value=2.7e-14 Score=131.91 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=79.5
Q ss_pred CCCEEEEECCccCc----cc----ccCC----CceEEEEeCCHHHHHHHHHc----------------------------
Q 017080 122 SGSLVLDAGCGNGK----YL----GLNP----DCFFVGCDISPSLIKICVDR---------------------------- 161 (377)
Q Consensus 122 ~~~~vLDiGcG~G~----~~----~~~~----~~~v~gvD~s~~~~~~a~~~---------------------------- 161 (377)
++.+|||+|||||. ++ ...+ +.+|+|+|+|+.|++.|+++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999997 22 2212 57999999999999999874
Q ss_pred ----------CCeEEEeeCCCCCCC-CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 162 ----------GHEVLVADAVNLPYR-SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 162 ----------~~~~~~~d~~~~~~~-~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.+.|.+.|+.+.|++ .++||+|+|.++++|++++. ..++++++++.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~-~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTT-QEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHH-HHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHH-HHHHHHHHHHHhCCCcEEEEE
Confidence 267888898886665 57899999999999997643 689999999999999999884
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.50 E-value=3.2e-14 Score=125.51 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=79.5
Q ss_pred CCCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 120 LPSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
+.++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.|+++ ++++..+|+.+.+ +++||+|++..++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcH
Confidence 4678899999999999753 24556999999999999999886 3889999987743 6899999999888
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++ ..+++++.++|||||.+++.++.
T Consensus 136 ~~~------~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 136 EIL------LDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp HHH------HHHGGGSGGGEEEEEEEEEEEEE
T ss_pred HHH------HHHHHHHHHhcCCCCEEEEEecC
Confidence 763 57899999999999999997654
No 107
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.50 E-value=3.6e-14 Score=121.84 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=78.4
Q ss_pred CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh---
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE--- 195 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~--- 195 (377)
.++.+|||+|||+|.++.. ..+ +|+|+|+|+.|++. ..+++++++|+.+ ++++++||+|+++..+++.++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~--~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES--HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT--CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc--ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccccc
Confidence 4567999999999997642 333 99999999999998 5579999999988 6667899999999988876652
Q ss_pred ---HHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 196 ---SRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 196 ---~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.+...+++++.+.| |||.+++..+.
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 01357889999999 99999998754
No 108
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.48 E-value=1.6e-14 Score=129.25 Aligned_cols=126 Identities=14% Similarity=0.217 Sum_probs=90.2
Q ss_pred HHHHHHHHhhCcccccccccchHHHHHHHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc---
Q 017080 89 KYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--- 161 (377)
Q Consensus 89 ~~~~~~y~~~a~~y~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--- 161 (377)
..+.+++.+....|... ...|. ..+. .++.+|||||||+|.++. ..|+..|+|+|+|+.+++.|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~-~~d~~---~~f~--~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~ 80 (218)
T 3dxy_A 7 HALENYWPVMGVEFSED-MLDFP---ALFG--REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE 80 (218)
T ss_dssp CHHHHHHHHHBCCCCSS-CCCHH---HHHS--SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHhHHhCCCCCCC-CCCHH---HHcC--CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH
Confidence 34555555555444322 12232 2232 256799999999999653 47889999999999999998875
Q ss_pred ----CCeEEEeeCCCC-C--CCCCceeEEEeccchhhcCChHH-----HHHHHHHHHHccccCcEEEEEEc
Q 017080 162 ----GHEVLVADAVNL-P--YRSDFGDAAISIAVLHHLSTESR-----RKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 162 ----~~~~~~~d~~~~-~--~~~~~fD~V~~~~~l~h~~~~~~-----~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+++++.+|+.++ + +++++||.|++.....+...... ...+++++.++|||||.+++.+.
T Consensus 81 ~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 81 EGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp TTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred hCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 578999998874 3 67899999999865443332110 02599999999999999999874
No 109
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=2.6e-14 Score=128.51 Aligned_cols=96 Identities=17% Similarity=0.360 Sum_probs=72.5
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCC-HHHHHHH---HHc-------CCeEEEeeCCCCCCC-CCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDIS-PSLIKIC---VDR-------GHEVLVADAVNLPYR-SDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s-~~~~~~a---~~~-------~~~~~~~d~~~~~~~-~~~fD~V~ 184 (377)
.++.+|||||||+|.++. ..++..|+|+|+| +.|++.| +++ ++.+.++|++++|.. .+.+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 577899999999999753 3788899999999 7777776 443 578999999988632 25666666
Q ss_pred eccchhh-----cCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 185 SIAVLHH-----LSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~~~l~h-----~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+.....+ ..+ ...+|++++|+|||||.+++..
T Consensus 103 ~~~~~~~~~~~~~~~---~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKP---NRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTT---CHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcc---hHHHHHHHHHhcCCCcEEEEEE
Confidence 6543222 122 3578999999999999999954
No 110
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.48 E-value=7.3e-14 Score=134.32 Aligned_cols=135 Identities=11% Similarity=0.111 Sum_probs=98.2
Q ss_pred ChhhhHHHHHHHHHhhCccccccc---------ccc-----hHHHHHHHhCCCCCCEEEEECCccCcccc----cCCCce
Q 017080 83 TPELEKKYVHRVYDAIAPHFSSTR---------FAK-----WPKVATFLNSLPSGSLVLDAGCGNGKYLG----LNPDCF 144 (377)
Q Consensus 83 ~~~~~~~~~~~~y~~~a~~y~~~~---------~~~-----~~~~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~ 144 (377)
....-.+.+...|++.....+.-+ +.. ...++..+ .+.++.+|||||||+|.++. ..+..+
T Consensus 121 ~~~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l-~l~~gd~VLDLGCGtG~l~l~lA~~~g~~k 199 (438)
T 3uwp_A 121 STGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETSFDLVAQMIDEI-KMTDDDLFVDLGSGVGQVVLQVAAATNCKH 199 (438)
T ss_dssp CHHHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGGGTHHHHHHHHHHHH-CCCTTCEEEEESCTTSHHHHHHHHHCCCSE
T ss_pred CHHHHHHHHHHHHhhcCCCHHHhcCcccCCCcccCCCCHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHHCCCCE
Confidence 346777788889987766433311 111 12333332 46788999999999999652 234446
Q ss_pred EEEEeCCHHHHHHHHHc----------------CCeEEEeeCCCCCCCC--CceeEEEeccchhhcCChHHHHHHHHHHH
Q 017080 145 FVGCDISPSLIKICVDR----------------GHEVLVADAVNLPYRS--DFGDAAISIAVLHHLSTESRRKKAIEELV 206 (377)
Q Consensus 145 v~gvD~s~~~~~~a~~~----------------~~~~~~~d~~~~~~~~--~~fD~V~~~~~l~h~~~~~~~~~~l~~~~ 206 (377)
|+|||+|+.+++.|+++ ++.|+++|+.++++.+ ..||+|+++.++. .++ ....|++++
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pd---l~~aL~Ei~ 275 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAF-GPE---VDHQLKERF 275 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTC-CHH---HHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEccccc-Cch---HHHHHHHHH
Confidence 99999999999888751 4789999999987654 5799999987763 333 788999999
Q ss_pred HccccCcEEEEEEcCC
Q 017080 207 RVVKKGSLVLITVWAV 222 (377)
Q Consensus 207 r~LkpgG~l~i~~~~~ 222 (377)
++|||||+|++.+...
T Consensus 276 RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 276 ANMKEGGRIVSSKPFA 291 (438)
T ss_dssp TTSCTTCEEEESSCSS
T ss_pred HcCCCCcEEEEeeccc
Confidence 9999999999886543
No 111
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.48 E-value=4.9e-14 Score=122.81 Aligned_cols=99 Identities=10% Similarity=0.035 Sum_probs=82.4
Q ss_pred CCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC--CCCCceeEEEeccc
Q 017080 121 PSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP--YRSDFGDAAISIAV 188 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~V~~~~~ 188 (377)
.++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.++++ +++++++|+.+++ +++++||+|++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 467899999999999754 24455899999999999999886 4789999998753 44789999999988
Q ss_pred hhhc-CChHHHHHHHHHHHH--ccccCcEEEEEEcCC
Q 017080 189 LHHL-STESRRKKAIEELVR--VVKKGSLVLITVWAV 222 (377)
Q Consensus 189 l~h~-~~~~~~~~~l~~~~r--~LkpgG~l~i~~~~~ 222 (377)
+++. .+ ...+++++.+ +|||||.+++.....
T Consensus 123 ~~~~~~~---~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSAD---VDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHH---HHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhh---HHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 7765 33 7899999999 999999999987543
No 112
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.48 E-value=1.2e-13 Score=132.59 Aligned_cols=139 Identities=19% Similarity=0.248 Sum_probs=104.1
Q ss_pred CCCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.+..+|||||||+|.++ +.+|+.+++..|+ |.+++.++++ +++++.+|+...|.+ .+|+|++..+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v 253 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARV 253 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESS
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeee
Confidence 345679999999999975 3489999999998 8899988875 589999999876543 4799999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHH--hhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYV--EEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
||+++|++ ..++|+++++.|+|||+++|.+......... +....+. .-+... .....+.++|+++
T Consensus 254 lh~~~d~~-~~~iL~~~~~al~pgg~lli~e~~~~~~~~~------~~~~~~~dl~ml~~~------~g~ert~~e~~~l 320 (353)
T 4a6d_A 254 LHDWADGK-CSHLLERIYHTCKPGGGILVIESLLDEDRRG------PLLTQLYSLNMLVQT------EGQERTPTHYHML 320 (353)
T ss_dssp GGGSCHHH-HHHHHHHHHHHCCTTCEEEEEECCCCTTSCC------CHHHHHHHHHHHHSS------SCCCCCHHHHHHH
T ss_pred cccCCHHH-HHHHHHHHHhhCCCCCEEEEEEeeeCCCCCC------CHHHHHHHHHHHHhC------CCcCCCHHHHHHH
Confidence 99999855 6789999999999999999998764422110 0011111 111110 1234578899999
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
++++||++
T Consensus 321 l~~AGf~~ 328 (353)
T 4a6d_A 321 LSSAGFRD 328 (353)
T ss_dssp HHHHTCEE
T ss_pred HHHCCCce
Confidence 99999966
No 113
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=1.5e-13 Score=117.89 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=76.9
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC-CCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVN-LPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~-~~~~~~~fD~V~~ 185 (377)
.+.++.+|||+|||+|.++. ..++.+|+|+|+|+.+++.++++ ++ ++.+|+.+ ++..+++||+|++
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 45678899999999999753 35788999999999999999876 34 77777754 3332389999999
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
..+++| ..+++++.++|||||.+++....
T Consensus 101 ~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 101 GGGLTA-------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CC-TTC-------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred CCcccH-------HHHHHHHHHhcCCCCEEEEEeec
Confidence 999987 26899999999999999998764
No 114
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.47 E-value=1.4e-13 Score=122.35 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=71.6
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHH----HHHHHc-CCeEEEeeCCCC----CCCCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLI----KICVDR-GHEVLVADAVNL----PYRSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~----~~a~~~-~~~~~~~d~~~~----~~~~~~fD~V~~~ 186 (377)
+.++.+|||+|||+|.++. ..+..+|+|+|+|+.|+ +.++.+ ++.++++|+... ++. ++||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 4678899999999999753 24467999999999865 444443 677888888773 443 889999997
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. .++ ++...++++++++|||||.+++..
T Consensus 134 ~-~~~----~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 134 I-AQK----NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp C-CST----THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-cCh----hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3 221 224567999999999999999985
No 115
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=1.6e-13 Score=118.96 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=82.4
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------C--CeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------G--HEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~--~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
..++.+|||+|||+|.++.. ..+.+++|+|+|+.+++.++++ + +++..+|+.+ ++++++||+|++..+
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPP 128 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCC
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCC
Confidence 45788999999999997532 2277999999999999999876 2 7889999887 345778999999988
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++|.. +....+++++.++|+|||.+++.++..
T Consensus 129 ~~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 129 IRAGK--EVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp STTCH--HHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cccch--hHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 87632 227899999999999999999998764
No 116
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.46 E-value=1.1e-13 Score=125.27 Aligned_cols=92 Identities=17% Similarity=0.058 Sum_probs=78.1
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCC---CCceeEEEec
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYR---SDFGDAAISI 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~---~~~fD~V~~~ 186 (377)
.++.+|||||||+|.++. ..++.+|+|+|+|+.+++.++++ +++++++|+.++++. +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467899999999998642 26788999999999999998875 578999999887653 6799999997
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. +.+ +..+++++.++|||||.+++..
T Consensus 149 ~----~~~---~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 149 A----VAR---LSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp C----CSC---HHHHHHHHGGGEEEEEEEEEEE
T ss_pred c----cCC---HHHHHHHHHHhcCCCCEEEEEe
Confidence 6 355 7899999999999999998864
No 117
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=1.6e-13 Score=122.04 Aligned_cols=100 Identities=17% Similarity=0.297 Sum_probs=81.1
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC--CCCCceeEEEecc
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP--YRSDFGDAAISIA 187 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~V~~~~ 187 (377)
.++.+|||||||+|.++. ..|+.+++|+|+|+.+++.|+++ ++.++.+|+.+++ +++++||+|++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 457899999999999753 37889999999999999998875 5789999999876 7788999999987
Q ss_pred chhhcCChH-----HHHHHHHHHHHccccCcEEEEEEc
Q 017080 188 VLHHLSTES-----RRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 188 ~l~h~~~~~-----~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
...+..... ....+++++.++|||||.+++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 654332100 025899999999999999999763
No 118
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.46 E-value=3.9e-14 Score=120.85 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=85.6
Q ss_pred HHHHHHhCCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCC
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSD 178 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~ 178 (377)
.+...+..+.++.+|||+|||+|.++. . .++.+++|+|+|+ +++. .++++..+|+.+.+ ++++
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---CcEEEEEcccccchhhhhhhccCCCC
Confidence 344444456788999999999999753 2 4678999999999 7654 45889999998876 6778
Q ss_pred ceeEEEeccchhhcCChHH--------HHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 179 FGDAAISIAVLHHLSTESR--------RKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 179 ~fD~V~~~~~l~h~~~~~~--------~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
+||+|++..++++..+... ...+++++.++|+|||.+++.++...
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 9999999999888776210 16899999999999999999887543
No 119
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.45 E-value=7.8e-14 Score=133.99 Aligned_cols=142 Identities=15% Similarity=0.108 Sum_probs=101.4
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.++.+|||||||+|.++. ..|+.+++++|+ +.+++.+++. +++++.+|+.+ +++ +||+|++..++||++++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~ 267 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDE 267 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHH
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHH
Confidence 456899999999999753 378889999999 7888877653 68999999987 655 49999999999999884
Q ss_pred HHHHHHHHHHHHcccc---CcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCC
Q 017080 196 SRRKKAIEELVRVVKK---GSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSE 272 (377)
Q Consensus 196 ~~~~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF 272 (377)
+ ..++|++++++||| ||+++|.++........ +.+. ............ .......+.++|.++++++||
T Consensus 268 ~-~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~--~~~~-~~~~~~d~~~~~----~~~g~~~t~~e~~~ll~~aGf 339 (358)
T 1zg3_A 268 Q-SLKILKNSKEAISHKGKDGKVIIIDISIDETSDD--RGLT-ELQLDYDLVMLT----MFLGKERTKQEWEKLIYDAGF 339 (358)
T ss_dssp H-HHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSC--HHHH-HHHHHHHHHHHH----HHSCCCEEHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCcc--chhh-hHHHhhCHHHhc----cCCCCCCCHHHHHHHHHHcCC
Confidence 3 45999999999999 99999988664322110 0000 000000000000 001234688999999999999
Q ss_pred cc
Q 017080 273 EQ 274 (377)
Q Consensus 273 ~~ 274 (377)
++
T Consensus 340 ~~ 341 (358)
T 1zg3_A 340 SS 341 (358)
T ss_dssp CE
T ss_pred Ce
Confidence 66
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.45 E-value=1.3e-13 Score=131.49 Aligned_cols=98 Identities=20% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||||||+|.++.. ....+|+|+|+|+ +++.|+++ +++++.+|+.++++++++||+|++..
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEW 139 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECC
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcC
Confidence 356788999999999997532 3345999999997 88888764 47899999999988889999999987
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
+.+++.....+..++.++.++|||||.++.
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred chhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 433333322378999999999999999873
No 121
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.45 E-value=1.1e-13 Score=123.37 Aligned_cols=100 Identities=17% Similarity=0.263 Sum_probs=79.6
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC--CCCCceeEEEecc
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP--YRSDFGDAAISIA 187 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~V~~~~ 187 (377)
.++.+|||||||+|.++. ..|+..|+|+|+|+.+++.|+++ ++.++.+|+.+++ +++++||.|++..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 356799999999999753 37889999999999999998875 5789999998865 6788999998865
Q ss_pred chhhcCChH-----HHHHHHHHHHHccccCcEEEEEEc
Q 017080 188 VLHHLSTES-----RRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 188 ~l~h~~~~~-----~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
...+..... ....+++++.++|||||.+++.+.
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 443322100 025799999999999999999863
No 122
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.44 E-value=1.7e-13 Score=125.94 Aligned_cols=92 Identities=35% Similarity=0.440 Sum_probs=79.7
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
.++.+|||||||+|.++. ..++.+|+|+|+|+.+++.++++ ++.+..+|+.++++++++||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 577899999999999763 24678999999999999999987 5889999999999888999999986542
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
..++++.++|||||.+++.++..
T Consensus 159 -----~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 -----CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -----CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -----hhHHHHHHhcCCCcEEEEEEcCH
Confidence 35889999999999999998764
No 123
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.44 E-value=1.7e-13 Score=119.96 Aligned_cols=104 Identities=16% Similarity=0.231 Sum_probs=83.1
Q ss_pred CCCCCCEEEEECCccCccccc-----CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCC-CCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL-----NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLP-YRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~-----~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~-~~~~~fD~V~ 184 (377)
.+.++.+|||+|||+|.++.. .+..+|+|+|+|+.+++.|+++ +++++++|+.+++ +.+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 457789999999999986532 3667999999999999999876 4789999998875 5678999999
Q ss_pred eccch-h-----hcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 185 SIAVL-H-----HLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 185 ~~~~l-~-----h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+...+ . +....+....+++++.++|||||++++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 88655 1 12222236789999999999999999988654
No 124
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.44 E-value=3.6e-14 Score=122.48 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=78.5
Q ss_pred CCCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc----CC--eEEEeeCCCCCCCCCceeEEEeccch
Q 017080 120 LPSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR----GH--EVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~----~~--~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
+++..+|||+|||+|.++ ...|+++|+++|+|+.|++.++++ ++ ++...|.... .+.++||+|++..++
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKML 125 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCH
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHH
Confidence 567889999999999975 347889999999999999999987 33 4555666543 457889999999999
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
||+++ .+..+.++++.|||||.++-..
T Consensus 126 HlL~~---~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVLKQ---QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHH---TTCCHHHHHHTCEEEEEEEEEE
T ss_pred Hhhhh---hHHHHHHHHHHhCCCCEEEEeC
Confidence 99943 6788889999999998765543
No 125
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.44 E-value=6.5e-14 Score=134.17 Aligned_cols=98 Identities=17% Similarity=0.128 Sum_probs=79.6
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. .+..+|+|+|+|+ +++.|+++ .++++.+|++++++++++||+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 35788999999999997532 4455999999995 88888875 278999999999988899999999776
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.+++.....+..+++++.++|||||+++..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 555522222889999999999999998744
No 126
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.43 E-value=2.8e-14 Score=136.86 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=88.9
Q ss_pred HHhhCccccccccc---ch-HHHHHHHhCC-CCCCEEEEECCc------cCccc----c-cCCCceEEEEeCCHHHHHHH
Q 017080 95 YDAIAPHFSSTRFA---KW-PKVATFLNSL-PSGSLVLDAGCG------NGKYL----G-LNPDCFFVGCDISPSLIKIC 158 (377)
Q Consensus 95 y~~~a~~y~~~~~~---~~-~~~~~~l~~~-~~~~~vLDiGcG------~G~~~----~-~~~~~~v~gvD~s~~~~~~a 158 (377)
|++++..|....+. .+ .....++..+ .++.+||||||| +|..+ . ..|+++|+|+|+|+.|..
T Consensus 184 fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~-- 261 (419)
T 3sso_A 184 LSELSSRYFTPKFGFLHWFTPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV-- 261 (419)
T ss_dssp HHHHHHHTTCTTBSSSCBCHHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG--
T ss_pred HHHHHHHhCCCcccccchHHHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh--
Confidence 56666677654433 12 2233334333 456899999999 55432 2 358899999999999842
Q ss_pred HHcCCeEEEeeCCCCCCC------CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 159 VDRGHEVLVADAVNLPYR------SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 159 ~~~~~~~~~~d~~~~~~~------~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
...+++|+++|+.++++. +++||+|++... |++.+ +..+|++++++|||||++++.++.
T Consensus 262 ~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~d---~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 262 DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINAH---VRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHHH---HHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cCCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccchh---HHHHHHHHHHhcCCCeEEEEEecc
Confidence 223799999999998876 689999999754 55554 789999999999999999998754
No 127
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.43 E-value=7e-13 Score=117.24 Aligned_cols=95 Identities=12% Similarity=0.034 Sum_probs=77.7
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.+.++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.|+++ +++++.+|+.+......+||+|++...
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 456788999999999997532 2278999999999999999876 478899999884333467999998774
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+ + .. +++++.++|||||++++....
T Consensus 132 ~----~---~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 132 G----S---QA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp C----C---HH-HHHHHHHHSCTTCEEEEEECS
T ss_pred c----c---HH-HHHHHHHhcCCCcEEEEEecC
Confidence 4 3 56 999999999999999998764
No 128
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.43 E-value=5.3e-14 Score=136.12 Aligned_cols=100 Identities=18% Similarity=0.084 Sum_probs=81.3
Q ss_pred hCCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEec
Q 017080 118 NSLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
..+.++.+|||||||+|.++.. ....+|+|+|+| .|++.|+++ +++++.+|+++++++ ++||+|++.
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~ 136 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISE 136 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEEC
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEc
Confidence 3456789999999999997532 323399999999 999888875 278999999998876 899999997
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+.+++..+..+..+++++.++|||||.+++..
T Consensus 137 ~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 137 WMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 766766543337889999999999999998754
No 129
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.42 E-value=2.9e-13 Score=119.72 Aligned_cols=94 Identities=19% Similarity=0.134 Sum_probs=80.5
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ ++++..+|+...+..+++||+|++..++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAP 153 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBC
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccch
Confidence 456789999999999997532 2267999999999999999876 4789999998876667899999999999
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+|+++ ++.++|||||++++....
T Consensus 154 ~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred hhhhH---------HHHHhcccCcEEEEEEcC
Confidence 99986 378999999999999876
No 130
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.42 E-value=3.4e-13 Score=121.99 Aligned_cols=100 Identities=23% Similarity=0.327 Sum_probs=76.0
Q ss_pred CCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc-------------CCeEEEeeCCC-CC--CCCCce
Q 017080 121 PSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR-------------GHEVLVADAVN-LP--YRSDFG 180 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~~d~~~-~~--~~~~~f 180 (377)
.++.+|||||||+|.++ ...|+..|+|+|+|+.|++.|+++ +++++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 45679999999999964 347889999999999999887631 57899999987 66 778999
Q ss_pred eEEEeccchhhcCChHH-----HHHHHHHHHHccccCcEEEEEEc
Q 017080 181 DAAISIAVLHHLSTESR-----RKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 181 D~V~~~~~l~h~~~~~~-----~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
|.|++...-.|...... ...+++++.++|||||.|++.+.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99987654333221000 04799999999999999999864
No 131
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.41 E-value=8.5e-13 Score=122.10 Aligned_cols=98 Identities=17% Similarity=0.234 Sum_probs=78.4
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEec---
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISI--- 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~--- 186 (377)
.++.+|||+|||+|.++. ..++.+|+|+|+|+.+++.++++ +++++++|+.+. +++++||+|+++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCC
Confidence 467899999999999652 36788999999999999999876 478888998763 446789999998
Q ss_pred ----------cchhhcCCh---------HHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 ----------AVLHHLSTE---------SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ----------~~l~h~~~~---------~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+++|-+.. +....+++++.++|||||++++..
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 344444321 126789999999999999999863
No 132
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.41 E-value=6.4e-13 Score=119.53 Aligned_cols=93 Identities=15% Similarity=0.211 Sum_probs=76.8
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCC----CCCCCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVN----LPYRSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~----~~~~~~~fD~V~~~ 186 (377)
+.++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.++++ ++.++.+|+.. +++. ++||+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~-- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIY-- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEE--
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEE--
Confidence 4578899999999999653 24567999999999999988765 57889999988 6665 7899998
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+++++.+....+++++.++|||||.+++.
T Consensus 149 ---~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 ---EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 45666332478899999999999999997
No 133
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.41 E-value=3.1e-13 Score=129.39 Aligned_cols=98 Identities=16% Similarity=0.091 Sum_probs=80.3
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. .+..+|+|+|+|+ +++.|+++ +++++.+|+.+++++ ++||+|++..+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 125 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCC
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCc
Confidence 45788999999999997532 4456999999996 88877764 478999999998765 68999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++|+..+. ....+.++.++|||||.+++...
T Consensus 126 ~~~~~~~~-~~~~l~~~~~~LkpgG~li~~~~ 156 (348)
T 2y1w_A 126 GYMLFNER-MLESYLHAKKYLKPSGNMFPTIG 156 (348)
T ss_dssp BTTBTTTS-HHHHHHHGGGGEEEEEEEESCEE
T ss_pred hhcCChHH-HHHHHHHHHhhcCCCeEEEEecC
Confidence 99887644 67888899999999999987643
No 134
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.41 E-value=1.9e-12 Score=116.07 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=80.3
Q ss_pred hCCCCCCEEEEECCc-cCccccc---CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCC-CCCCCceeEEEec
Q 017080 118 NSLPSGSLVLDAGCG-NGKYLGL---NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNL-PYRSDFGDAAISI 186 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG-~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~-~~~~~~fD~V~~~ 186 (377)
..++++.+|||+||| +|.++.. ..+.+|+|+|+|+.+++.|+++ +++++++|+..+ ++++++||+|+++
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 346788999999999 9997532 2278999999999999999876 488999997543 4557899999998
Q ss_pred cchhhcCCh----------------HHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 187 AVLHHLSTE----------------SRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 187 ~~l~h~~~~----------------~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
-.+++..+. +....+++++.++|||||++++..+.
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 766554431 11378999999999999999997643
No 135
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.40 E-value=3.9e-14 Score=144.29 Aligned_cols=103 Identities=23% Similarity=0.299 Sum_probs=83.6
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCC--CCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNL--PYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~--~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. ..|++|+|||+|+.+++.|+.+ +++|.+++++++ ++.+++||+|+|..+
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 35678999999999998642 5689999999999999998865 368899999887 456789999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
+||+++.. ....+..+.+.|+++|..++..+...
T Consensus 144 ~ehv~~~~-~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 144 FHHIVHLH-GIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp HHHHHHHH-CHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred hhcCCCHH-HHHHHHHHHHHhccccceeeEEeccc
Confidence 99999843 23445678888999988888766543
No 136
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.40 E-value=2.1e-12 Score=116.23 Aligned_cols=96 Identities=19% Similarity=0.162 Sum_probs=72.7
Q ss_pred CCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHH----HHHHHc-CCeEEEeeCCCCC---CCCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLI----KICVDR-GHEVLVADAVNLP---YRSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~----~~a~~~-~~~~~~~d~~~~~---~~~~~fD~V~~~ 186 (377)
+.+|.+|||+|||+|.++. . .+...|+|+|+|+.|+ +.++++ ++.++++|+.... ...++||+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 5689999999999999753 2 5678999999999875 444443 7899999998643 124689999998
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
... ++ ....++..+.+.|||||.++++..
T Consensus 154 ~a~---~~--~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 154 IAQ---PD--QTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CCC---TT--HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCC---hh--HHHHHHHHHHHhCCCCeEEEEEEc
Confidence 654 44 133445566679999999999854
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.40 E-value=4.8e-13 Score=129.39 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=84.3
Q ss_pred CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEeccchhh-
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAISIAVLHH- 191 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h- 191 (377)
.++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.++++ .++++.+|+.+.+.++++||+|+++..+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 3678999999999997642 3367999999999999999886 478999999998776789999999999988
Q ss_pred --cCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 192 --LSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 192 --~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
... +....+++++.++|||||.+++....
T Consensus 312 ~~~~~-~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 312 GAVIL-DVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CSSCC-HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccH-HHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 222 22789999999999999999998644
No 138
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.39 E-value=3.5e-13 Score=127.95 Aligned_cols=97 Identities=23% Similarity=0.241 Sum_probs=77.9
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
+.++.+|||||||+|.++.. .+..+|+|+|+| .+++.|+++ +++++.+|+.++++++++||+|++..+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 34678999999999997532 344599999999 588888765 378999999998888889999999866
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
.+++.....+..++.++.++|||||.++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 55543333278999999999999999874
No 139
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.39 E-value=3.2e-13 Score=116.11 Aligned_cols=107 Identities=16% Similarity=0.075 Sum_probs=81.7
Q ss_pred HHHHHHhCCCCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC-CCCCCCc
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVN-LPYRSDF 179 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~-~~~~~~~ 179 (377)
.+...+....++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.++++ ++.++.+|+.+ ++..+++
T Consensus 21 ~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (177)
T 2esr_A 21 AIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGR 100 (177)
T ss_dssp HHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSC
T ss_pred HHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCC
Confidence 444555445678899999999999753 24456999999999999999875 36788888877 3434567
Q ss_pred eeEEEeccchhhcCChHHHHHHHHHHH--HccccCcEEEEEEcCC
Q 017080 180 GDAAISIAVLHHLSTESRRKKAIEELV--RVVKKGSLVLITVWAV 222 (377)
Q Consensus 180 fD~V~~~~~l~h~~~~~~~~~~l~~~~--r~LkpgG~l~i~~~~~ 222 (377)
||+|++...+++ .. ....++.+. ++|||||.+++.....
T Consensus 101 fD~i~~~~~~~~-~~---~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 101 FDLVFLDPPYAK-ET---IVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp EEEEEECCSSHH-HH---HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCEEEECCCCCc-ch---HHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 999999876542 22 567777777 9999999999987654
No 140
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=7e-13 Score=114.72 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=77.9
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCC-CceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRS-DFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~-~~fD~V~~~~ 187 (377)
.+.++.+|||+|||+|.++.. ....+|+|+|+|+.+++.++++ ++.+..+|+.+ ++++ ++||+|++..
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECC
Confidence 466788999999999997532 2238999999999999999874 46788888776 3333 6899999998
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++| +..+++++.++|+|||.+++..+.
T Consensus 109 ~~~~------~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 109 SGGE------LQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp CTTC------HHHHHHHHHHTEEEEEEEEEEECB
T ss_pred chHH------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 7753 578999999999999999998754
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.38 E-value=1.2e-12 Score=115.40 Aligned_cols=90 Identities=16% Similarity=0.129 Sum_probs=76.4
Q ss_pred CCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccchh
Q 017080 122 SGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~ 190 (377)
++.+|||+|||+|.++. ..++.+++|+|+|+.+++.++++ ++.+..+|+.+++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec---
Confidence 47899999999999753 36788999999999999999875 4788999998865 467899999864
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+.+ +..+++++.++|+|||.+++..
T Consensus 141 -~~~---~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 -FAS---LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -SSS---HHHHHHHHTTSEEEEEEEEEEE
T ss_pred -cCC---HHHHHHHHHHhcCCCcEEEEEe
Confidence 344 7899999999999999999875
No 142
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.38 E-value=5.7e-13 Score=115.23 Aligned_cols=103 Identities=12% Similarity=0.033 Sum_probs=79.9
Q ss_pred HHhCCCCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCC----CCCCce
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLP----YRSDFG 180 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~----~~~~~f 180 (377)
.+....++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.|+++ +++++.+|+.+.. ..+++|
T Consensus 38 ~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 38 MIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp HHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred HHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCC
Confidence 33334567899999999999753 24457999999999999999875 3788999987632 236789
Q ss_pred eEEEeccchhhcCChHHHHHHHHHH--HHccccCcEEEEEEcCC
Q 017080 181 DAAISIAVLHHLSTESRRKKAIEEL--VRVVKKGSLVLITVWAV 222 (377)
Q Consensus 181 D~V~~~~~l~h~~~~~~~~~~l~~~--~r~LkpgG~l~i~~~~~ 222 (377)
|+|++...++ ..+ ....++.+ .++|||||.+++.....
T Consensus 118 D~i~~~~~~~-~~~---~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 118 DLVLLDPPYA-KQE---IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEEECCCGG-GCC---HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CEEEECCCCC-chh---HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 9999988754 444 56777777 89999999999987654
No 143
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=4.9e-13 Score=122.55 Aligned_cols=106 Identities=15% Similarity=0.170 Sum_probs=79.9
Q ss_pred HHHHhCCC-CCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCC--CCCCc
Q 017080 114 ATFLNSLP-SGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLP--YRSDF 179 (377)
Q Consensus 114 ~~~l~~~~-~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~--~~~~~ 179 (377)
+..+..+. ++.+|||+|||+|.++. .....+|+|+|+++.+++.|+++ +++++.+|+.+++ +++++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 33344566 78999999999999753 22333999999999999999886 3789999998865 55789
Q ss_pred eeEEEeccchhhc-----CCh------------HHHHHHHHHHHHccccCcEEEEEE
Q 017080 180 GDAAISIAVLHHL-----STE------------SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 180 fD~V~~~~~l~h~-----~~~------------~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
||+|+++-.+.+. .+. .....+++.+.++|||||++++..
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 9999997544322 110 125689999999999999999964
No 144
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.38 E-value=3.1e-13 Score=118.58 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=76.2
Q ss_pred CCCCCCEEEEECCccCcccc----cCC--CceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC------------------
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNP--DCFFVGCDISPSLIKICVDRGHEVLVADAVNLP------------------ 174 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~------------------ 174 (377)
.+.++.+|||+|||+|.++. ..+ +.+|+|+|+|+.+ ...++.++++|+.+.+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 19 FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccccccccchhh
Confidence 36788899999999999753 245 6899999999942 1236899999998876
Q ss_pred -------CCCCceeEEEeccchhhcC----ChHH----HHHHHHHHHHccccCcEEEEEEcC
Q 017080 175 -------YRSDFGDAAISIAVLHHLS----TESR----RKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 175 -------~~~~~fD~V~~~~~l~h~~----~~~~----~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++++||+|++..++++.. +... ...+++++.++|||||.+++..+.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5678999999988777642 2110 124899999999999999997764
No 145
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.38 E-value=5.9e-13 Score=123.49 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=70.1
Q ss_pred CCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHcCCeEE---EeeCCCCC---CCCCceeEEEeccchhh
Q 017080 121 PSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDRGHEVL---VADAVNLP---YRSDFGDAAISIAVLHH 191 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~d~~~~~---~~~~~fD~V~~~~~l~h 191 (377)
.++.+|||||||||.++.. ....+|+|+|+|+.|++.+.+++-+.. ..|+..++ ++..+||+|++..++++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 3678999999999998742 334599999999999998655432222 23444333 34456999999888775
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+ ..+|.+++|+|||||.+++..
T Consensus 164 l------~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 164 L------NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp G------GGTHHHHHHHSCTTCEEEEEE
T ss_pred H------HHHHHHHHHHcCcCCEEEEEE
Confidence 4 479999999999999999874
No 146
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.38 E-value=7e-14 Score=123.46 Aligned_cols=104 Identities=20% Similarity=0.231 Sum_probs=64.7
Q ss_pred HHHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCC-----Cc
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRS-----DF 179 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~-----~~ 179 (377)
..+....++.+|||+|||+|.++. ..++.+++|+|+|+.+++.++++ +++++++|+.+ ++++ ++
T Consensus 23 ~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~ 101 (215)
T 4dzr_A 23 RFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRP 101 (215)
T ss_dssp HHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCC
T ss_pred HHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCc
Confidence 333333678899999999999753 36788999999999999999877 46777788876 5555 89
Q ss_pred eeEEEeccch------hhcCChHH-----------------HHHHHHHHHHccccCcEEEEEE
Q 017080 180 GDAAISIAVL------HHLSTESR-----------------RKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 180 fD~V~~~~~l------~h~~~~~~-----------------~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
||+|+++-.+ +|+..... ...+++++.++|||||++++..
T Consensus 102 fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 102 WHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp BSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred ccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9999996443 33332110 1788999999999999955544
No 147
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.38 E-value=1e-12 Score=117.96 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=79.0
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCCCceeEEEeccchhh
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h 191 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++.+|+......+++||+|++..+++|
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSS
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHH
Confidence 456788999999999997542 1237999999999999999987 588999999873334688999999999999
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+.+ ++.++|||||.+++.....
T Consensus 147 ~~~---------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 147 LLC---------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCH---------HHHHTEEEEEEEEEEECSS
T ss_pred HHH---------HHHHHcCCCcEEEEEEcCC
Confidence 863 4889999999999997653
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.37 E-value=7.2e-13 Score=120.87 Aligned_cols=92 Identities=21% Similarity=0.139 Sum_probs=77.9
Q ss_pred CCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCC---CCceeEEEec
Q 017080 121 PSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYR---SDFGDAAISI 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~---~~~fD~V~~~ 186 (377)
.++.+|||||||+|..+ ...|+.+|+|+|+|+.+++.++++ +++++.+|+++++.. +++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 46789999999999863 236889999999999999999876 578999999887642 4799999997
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+ .+ +..+++.+.++|||||++++..
T Consensus 159 a~----~~---~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 159 AV----AP---LCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp SS----CC---HHHHHHHHGGGEEEEEEEEEEE
T ss_pred Cc----CC---HHHHHHHHHHHcCCCeEEEEEe
Confidence 54 45 7899999999999999988865
No 149
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.37 E-value=5.5e-13 Score=119.16 Aligned_cols=103 Identities=19% Similarity=0.191 Sum_probs=80.3
Q ss_pred HHHhCCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC-CC-CC---
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVN-LP-YR--- 176 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~-~~-~~--- 176 (377)
..+....++.+|||||||+|..+. . .++.+|+++|+|+.+++.|+++ +++++++|+.+ ++ +.
T Consensus 51 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 51 DAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTS
T ss_pred HHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhc
Confidence 333334567899999999998642 2 3578999999999999999885 37899999855 33 22
Q ss_pred -CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 177 -SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 177 -~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.++||+|++....++..+ ...++..+ ++|||||++++.+..
T Consensus 131 ~~~~fD~V~~d~~~~~~~~---~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLP---DTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCCCSEEEECSCGGGHHH---HHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CCCceEEEEEcCCcccchH---HHHHHHhc-cccCCCeEEEEeCCC
Confidence 278999999988887765 56788888 999999999887654
No 150
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.37 E-value=3.6e-13 Score=118.72 Aligned_cols=97 Identities=14% Similarity=0.071 Sum_probs=76.6
Q ss_pred CCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc---------CCeEEEeeCCCCC--CCCCc-eeEEEec
Q 017080 122 SGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR---------GHEVLVADAVNLP--YRSDF-GDAAISI 186 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~~d~~~~~--~~~~~-fD~V~~~ 186 (377)
++.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ +++++.+|+.++. +++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 578999999999997532 2335999999999999999875 3578888987643 23678 9999998
Q ss_pred cchhhcCChHHHHHHHHHH--HHccccCcEEEEEEcCC
Q 017080 187 AVLHHLSTESRRKKAIEEL--VRVVKKGSLVLITVWAV 222 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~--~r~LkpgG~l~i~~~~~ 222 (377)
..++ ..+ ...+++.+ .++|||||.+++.....
T Consensus 133 ~~~~-~~~---~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-FNL---AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-SCH---HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-Ccc---HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8754 333 67889999 67899999999987543
No 151
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.36 E-value=2.3e-12 Score=124.45 Aligned_cols=99 Identities=19% Similarity=0.163 Sum_probs=79.2
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc----C------CeEEEeeCCCCCCCCCceeEEEec
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR----G------HEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~----~------~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
.++.+|||+|||+|.++. ..|+.+|+|+|+|+.+++.++++ + +++..+|+.+ ++++++||+|+++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCN 299 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEEC
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEEC
Confidence 345799999999999753 37889999999999999999876 2 6679999987 4667899999999
Q ss_pred cchhhc---CChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 187 AVLHHL---STESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 187 ~~l~h~---~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
-.+|+. .+.. ...+++++.++|||||.+++....
T Consensus 300 ppfh~~~~~~~~~-~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 300 PPFHQQHALTDNV-AWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp CCC-------CCH-HHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CCcccCcccCHHH-HHHHHHHHHHhCCCCcEEEEEEEC
Confidence 988863 3322 457899999999999999997643
No 152
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.36 E-value=7.2e-13 Score=121.22 Aligned_cols=95 Identities=19% Similarity=0.145 Sum_probs=77.0
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----C--CeEEEeeCCCCCCCCCceeEEEeccchhh
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----G--HEVLVADAVNLPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~--~~~~~~d~~~~~~~~~~fD~V~~~~~l~h 191 (377)
+.++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.++++ + +++..+|+.+. +++++||+|+++...++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL 196 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH
Confidence 46788999999999997532 2344999999999999999886 3 67888887662 45788999999866554
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
...+++++.++|||||+++++.+.
T Consensus 197 ------~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 197 ------HAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHcCCCCEEEEEeec
Confidence 468999999999999999998653
No 153
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=2.9e-12 Score=110.04 Aligned_cols=93 Identities=18% Similarity=0.176 Sum_probs=79.0
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.+.++.+|||+|||+|.++.. .++.+++|+|+|+.+++.++++ +++++.+|+.+ ++++++||+|++..+
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-
Confidence 456788999999999997532 3778999999999999999876 47889999887 666789999999988
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.+ +..+++++.++ |||.+++..+.
T Consensus 110 ---~~---~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 110 ---KN---IEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp ---SC---HHHHHHHHHHT--TCCEEEEEESC
T ss_pred ---cc---HHHHHHHHhhC--CCCEEEEEecc
Confidence 44 78999999999 99999998754
No 154
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=3e-12 Score=113.54 Aligned_cols=95 Identities=23% Similarity=0.220 Sum_probs=77.9
Q ss_pred CCCCCCEEEEECCccCccccc-----CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL-----NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~-----~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
.+.++.+|||||||+|.++.. .+..+|+|+|+|+.+++.++++ ++.+..+|+......+++||+|++.
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEEC
Confidence 467788999999999997532 3558999999999999999875 4788888885533236789999999
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
.+++|+++ ++.++|||||.+++.....
T Consensus 154 ~~~~~~~~---------~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 154 AAGPKIPE---------PLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SBBSSCCH---------HHHHTEEEEEEEEEEESSS
T ss_pred CchHHHHH---------HHHHHcCCCcEEEEEECCC
Confidence 99998862 6889999999999997654
No 155
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.34 E-value=2.4e-12 Score=115.87 Aligned_cols=96 Identities=14% Similarity=0.198 Sum_probs=74.3
Q ss_pred CCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHH----HHHHH-cCCeEEEeeCCC---CCCCCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLI----KICVD-RGHEVLVADAVN---LPYRSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~----~~a~~-~~~~~~~~d~~~---~~~~~~~fD~V~~~ 186 (377)
+.++.+|||+|||+|.++. . .++.+|+|+|+|+.++ +.++. .++.++.+|+.+ +++.+++||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 5678899999999999753 2 3668999999998754 44544 378899999987 34557899999995
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
.. ..+....++.++.++|||||.+++...
T Consensus 155 ~~-----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 155 VA-----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CC-----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 54 222245678999999999999999654
No 156
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.34 E-value=2.5e-14 Score=129.45 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=81.9
Q ss_pred HHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
..+....++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++++|+.+++ ++++||+|+
T Consensus 71 ~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~ 149 (241)
T 3gdh_A 71 GRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVF 149 (241)
T ss_dssp HHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEE
T ss_pred HHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEE
Confidence 3333344788999999999997542 3458999999999999999875 4789999998876 578999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+..+++|..+ ....+.+++++|+|||.+++.
T Consensus 150 ~~~~~~~~~~---~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGPDY---ATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSGGG---GGSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCCcch---hhhHHHHHHhhcCCcceeHHH
Confidence 9999999887 556888999999999986554
No 157
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.34 E-value=1.6e-12 Score=120.16 Aligned_cols=94 Identities=17% Similarity=0.238 Sum_probs=79.9
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
.+.++.+|||+|||+|.++. . .++.+|+|+|+|+.+++.++++ ++++..+|+.+ ++++++||+|++
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE
Confidence 45778999999999998652 2 5788999999999999988875 36788899887 566789999998
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
|+++ +..+++++.++|||||++++.++.
T Consensus 186 -----~~~~---~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 186 -----DIPD---PWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp -----CCSC---GGGSHHHHHHTEEEEEEEEEEESS
T ss_pred -----cCcC---HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5677 679999999999999999998754
No 158
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.33 E-value=2.1e-12 Score=119.75 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=77.6
Q ss_pred CCCCCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||+|||+|.++.. ..+. +|+|+|+|+.+++.|+++ .++++++|+.+++. +++||+|++..
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~ 200 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY 200 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECC
Confidence 356789999999999997532 1122 799999999999999876 26789999998765 78999999853
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
. .+ ...++.++.++|||||++++.+...
T Consensus 201 p----~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 201 V----VR---THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp C----SS---GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c----hh---HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 3 23 4578999999999999999987653
No 159
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.33 E-value=2.8e-12 Score=121.12 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=78.5
Q ss_pred CCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
.+.++.+|||||||+|.++. ..+ ..+|+|+|+|+.+++.|+++ ++++..+|+.+.+..+++||+|++.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 45688999999999999753 233 46899999999999999876 4788999998865557899999999
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.+++|++ +++.++|||||++++....
T Consensus 152 ~~~~~~~---------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 152 VGVDEVP---------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SBBSCCC---------HHHHHHEEEEEEEEEEBCB
T ss_pred CCHHHHH---------HHHHHhcCCCcEEEEEECC
Confidence 9999986 3578899999999998644
No 160
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=3.2e-12 Score=116.45 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=81.3
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
.+.++.+|||+|||+|.++. . .|+.+|+++|+|+.+++.++++ ++.+..+|+.+.++++++||+|++
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 46788999999999998653 2 5688999999999999998875 477899999988777889999998
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++++ +..+++++.++|||||.+++..+.
T Consensus 173 -----~~~~---~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 173 -----DLME---PWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp -----ESSC---GGGGHHHHHHHEEEEEEEEEEESC
T ss_pred -----CCcC---HHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4566 668999999999999999998754
No 161
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.32 E-value=1.8e-12 Score=121.71 Aligned_cols=99 Identities=16% Similarity=0.100 Sum_probs=75.6
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCCCCC--CCCceeEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVNLPY--RSDFGDAA 183 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~~~~--~~~~fD~V 183 (377)
+++.+|||||||+|.++. ..+..+|+++|+|+.+++.|+++ +++++.+|+..++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 567899999999999754 24567999999999999999864 37889999877543 47899999
Q ss_pred EeccchhhcCChHHH--HHHHHHHHHccccCcEEEEEEc
Q 017080 184 ISIAVLHHLSTESRR--KKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~--~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++....++.+... . ..+++++.++|||||++++...
T Consensus 174 i~d~~~~~~~~~~-l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 174 IIDTTDPAGPASK-LFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCCCccccchh-hhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9977665544311 1 5899999999999999999754
No 162
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.32 E-value=3.2e-12 Score=114.48 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=83.1
Q ss_pred HHHHHHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCc
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDF 179 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~ 179 (377)
++......++++.+|||||||+|.++. ..+..+|+++|+++.+++.|+++ .+++..+|..+...+++.
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~ 90 (230)
T 3lec_A 11 RLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADN 90 (230)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred HHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccc
Confidence 444455567888999999999999742 35667999999999999999987 378999998886554457
Q ss_pred eeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 180 GDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 180 fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
||+|+..++...+ ...+|.+..+.|+++|+++++-
T Consensus 91 ~D~IviaGmGg~l-----I~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 91 IDTITICGMGGRL-----IADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp CCEEEEEEECHHH-----HHHHHHHTGGGGTTCCEEEEEE
T ss_pred cCEEEEeCCchHH-----HHHHHHHHHHHhCcCCEEEEEC
Confidence 9999887766543 5688999999999999988885
No 163
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.32 E-value=1.5e-12 Score=124.34 Aligned_cols=99 Identities=23% Similarity=0.267 Sum_probs=80.1
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEeccchh
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~ 190 (377)
.++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.++++ .++++.+|+...+ +++||+|+++.++|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCcc
Confidence 356799999999999753 36778999999999999999876 3567888887643 77999999999988
Q ss_pred hcC--ChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 191 HLS--TESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 191 h~~--~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+.. +.+....+++++.++|||||.+++....
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 521 1122789999999999999999998654
No 164
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.32 E-value=2.2e-12 Score=116.22 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=78.4
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C-CCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P-YRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~~~~~fD~V~ 184 (377)
.+.++.+|||||||+|..+. ..++.+|+|+|+|+.+++.|+++ +++++.+|+.+. + ..+++||+|+
T Consensus 68 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 68 RMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp HHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred hhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEE
Confidence 34567899999999999653 34788999999999999999875 478999999774 3 3368999999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+... ..+ ...+++++.++|||||++++.+..
T Consensus 148 ~~~~---~~~---~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 148 IDAA---KAQ---SKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp EETT---SSS---HHHHHHHHGGGEEEEEEEEEECTT
T ss_pred EcCc---HHH---HHHHHHHHHHhcCCCeEEEEeeCC
Confidence 7643 334 678999999999999999886543
No 165
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.32 E-value=7.3e-13 Score=112.72 Aligned_cols=98 Identities=16% Similarity=0.141 Sum_probs=75.7
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCC-C-CC--CCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNL-P-YR--SDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~-~-~~--~~~fD~V~~~~ 187 (377)
++++.+|||+|||+|.++.. ..+..|+|+|+|+.+++.++++ +++++.+|+.+. + .+ .++||+|++..
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 33678999999999997532 2344599999999999999876 588899998763 2 11 34899999998
Q ss_pred chhhcCChHHHHHHHHHHH--HccccCcEEEEEEcCC
Q 017080 188 VLHHLSTESRRKKAIEELV--RVVKKGSLVLITVWAV 222 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~--r~LkpgG~l~i~~~~~ 222 (377)
+++ .+ ...+++.+. ++|||||.+++.....
T Consensus 119 ~~~--~~---~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA--MD---LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT--SC---TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc--hh---HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 766 44 446666666 9999999999987654
No 166
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.31 E-value=6.2e-12 Score=112.41 Aligned_cols=94 Identities=21% Similarity=0.221 Sum_probs=77.3
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCCCCCCCCCcee
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR------------GHEVLVADAVNLPYRSDFGD 181 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~fD 181 (377)
.+.++.+|||||||+|.++. . .+..+|+|+|+|+.+++.++++ ++.+..+|+...+..+++||
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence 35678999999999999653 2 3557999999999999988754 47889999887665678899
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+|++..+++++. +++.++|||||.+++....
T Consensus 154 ~i~~~~~~~~~~---------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 154 AIHVGAAAPVVP---------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEECSBBSSCC---------HHHHHTEEEEEEEEEEESC
T ss_pred EEEECCchHHHH---------HHHHHhcCCCcEEEEEEec
Confidence 999999887664 4678999999999998754
No 167
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.31 E-value=3.6e-12 Score=116.10 Aligned_cols=95 Identities=17% Similarity=0.318 Sum_probs=80.3
Q ss_pred hCCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc-------C-CeEEEeeCCCCCCCCCceeEEE
Q 017080 118 NSLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR-------G-HEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~-------~-~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
..+.++.+|||+|||+|.++. . .|+.+|+|+|+|+.+++.|+++ + +++..+|+.+. +++++||+|+
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~ 167 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVI 167 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEE
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEE
Confidence 356788999999999999753 3 6788999999999999999876 3 78899999864 6678899999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+ +.++ +..+++++.++|||||.+++..+.
T Consensus 168 ~-----~~~~---~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 168 L-----DLPQ---PERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp E-----CSSC---GGGGHHHHHHHEEEEEEEEEEESS
T ss_pred E-----CCCC---HHHHHHHHHHHcCCCCEEEEEECC
Confidence 8 4566 678999999999999999998754
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.31 E-value=2.3e-12 Score=117.39 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=79.4
Q ss_pred HHHHHhCCCCCCEEEEECCccCccc----ccCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC-CCCC--
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYL----GLNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVN-LPYR-- 176 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~----~~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~-~~~~-- 176 (377)
++..+..+.++.+|||||||+|..+ ...+ +.+|+++|+|+.+++.|+++ +++++++|+.+ ++..
T Consensus 54 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~ 133 (248)
T 3tfw_A 54 FLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGE 133 (248)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCS
T ss_pred HHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCC
Confidence 3344434457789999999999964 3344 78999999999999999876 47899999876 3322
Q ss_pred CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 177 SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.++||+|++... ..+ ...+++++.++|||||++++.+..
T Consensus 134 ~~~fD~V~~d~~---~~~---~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 134 CPAFDLIFIDAD---KPN---NPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CCCCSEEEECSC---GGG---HHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CCCeEEEEECCc---hHH---HHHHHHHHHHhcCCCeEEEEeCCC
Confidence 358999998653 223 678999999999999999887644
No 169
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.31 E-value=1.8e-12 Score=114.25 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=76.5
Q ss_pred CCCEEEEECCccCccccc--CCC-ceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCC-CCCCCCceeEEEeccchh
Q 017080 122 SGSLVLDAGCGNGKYLGL--NPD-CFFVGCDISPSLIKICVDR-------GHEVLVADAVN-LPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~--~~~-~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~-~~~~~~~fD~V~~~~~l~ 190 (377)
++.+|||+|||+|.++.. ..+ .+|+|+|+|+.+++.|+++ +++++++|+.+ ++..+++||+|++...++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 568999999999997532 233 4999999999999999876 46889999877 455577999999987743
Q ss_pred hcCChHHHHHHHHHHHH--ccccCcEEEEEEcC
Q 017080 191 HLSTESRRKKAIEELVR--VVKKGSLVLITVWA 221 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r--~LkpgG~l~i~~~~ 221 (377)
... ...+++.+.+ +|+|||.+++....
T Consensus 134 -~~~---~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 -RGL---LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp -TTT---HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred -CCc---HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 444 6788888866 59999999988654
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.30 E-value=4.7e-12 Score=113.31 Aligned_cols=99 Identities=19% Similarity=0.271 Sum_probs=79.9
Q ss_pred HHHHh-CCCCCCEEEEECCccCcccc----c-C----CCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCC
Q 017080 114 ATFLN-SLPSGSLVLDAGCGNGKYLG----L-N----PDCFFVGCDISPSLIKICVDR------------GHEVLVADAV 171 (377)
Q Consensus 114 ~~~l~-~~~~~~~vLDiGcG~G~~~~----~-~----~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~ 171 (377)
...+. .+.++.+|||||||+|.++. . . +..+|+|+|+|+.+++.|+++ ++.+..+|+.
T Consensus 71 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 150 (227)
T 2pbf_A 71 LKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY 150 (227)
T ss_dssp HHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG
T ss_pred HHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChH
Confidence 34443 46788999999999999653 1 2 567999999999999998875 3788999988
Q ss_pred CCC----CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 172 NLP----YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 172 ~~~----~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
... ...++||+|++..+++|+. +++.++|||||++++..+.
T Consensus 151 ~~~~~~~~~~~~fD~I~~~~~~~~~~---------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 151 QVNEEEKKELGLFDAIHVGASASELP---------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GCCHHHHHHHCCEEEEEECSBBSSCC---------HHHHHHEEEEEEEEEEEEE
T ss_pred hcccccCccCCCcCEEEECCchHHHH---------HHHHHhcCCCcEEEEEEcc
Confidence 755 5568899999999988764 5678999999999998764
No 171
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.30 E-value=4.4e-12 Score=117.20 Aligned_cols=96 Identities=17% Similarity=0.276 Sum_probs=81.3
Q ss_pred CCCCCCEEEEECCccCcccc-----cCCCceEEEEeCCHHHHHHHHHc----------CCeEEEeeCCCCCCCCCceeEE
Q 017080 119 SLPSGSLVLDAGCGNGKYLG-----LNPDCFFVGCDISPSLIKICVDR----------GHEVLVADAVNLPYRSDFGDAA 183 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~-----~~~~~~v~gvD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~V 183 (377)
.+.++.+|||+|||+|.++. ..++.+|+++|+|+.+++.|+++ ++.+..+|+.+.++++++||+|
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v 175 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 175 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEE
Confidence 46788999999999999753 24678999999999999888764 3678899998887778899999
Q ss_pred EeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 184 ISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++ ++++ +..+++++.++|+|||.+++.++..
T Consensus 176 ~~-----~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 176 VL-----DMLA---PWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp EE-----ESSC---GGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EE-----CCcC---HHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 98 4556 6689999999999999999988653
No 172
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=7.7e-12 Score=114.75 Aligned_cols=101 Identities=13% Similarity=0.022 Sum_probs=78.6
Q ss_pred CCCCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc--C---------CeEEEeeCCCC-------CCC
Q 017080 119 SLPSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR--G---------HEVLVADAVNL-------PYR 176 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~--~---------~~~~~~d~~~~-------~~~ 176 (377)
...++.+|||+|||+|.++ ...++.+|+|+|+++.+++.|+++ . +.++.+|+.++ +++
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 4557789999999999964 236788999999999999999876 2 67899999886 256
Q ss_pred CCceeEEEeccchhhc----------------CChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 177 SDFGDAAISIAVLHHL----------------STESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~----------------~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+++||+|+++-.+... .... ...+++.+.++|||||.+++...
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGL-FEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TTCEEEEEECCCC---------------------CC-HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCC-HHHHHHHHHHHcCCCCEEEEEEc
Confidence 7899999997332211 1111 67899999999999999998754
No 173
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.29 E-value=1.8e-12 Score=113.50 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=76.4
Q ss_pred HHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCC-------C----Cc
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYR-------S----DF 179 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~-------~----~~ 179 (377)
+......+.++.+|||+|||+|.++.. ..+.+|+|+|+++... ..++.++++|+.+.+.. . ++
T Consensus 16 i~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 16 LLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE----IAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp HHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC----CTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred HHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc----CCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 333333467889999999999997642 2378999999998531 23699999999886421 1 48
Q ss_pred eeEEEeccchh--------hcCChHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 180 GDAAISIAVLH--------HLSTESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 180 fD~V~~~~~l~--------h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
||+|++..... |....+....+++.+.++|||||.+++..+...
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 99999965321 211111246789999999999999999887543
No 174
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.29 E-value=4.8e-12 Score=114.99 Aligned_cols=95 Identities=21% Similarity=0.353 Sum_probs=75.4
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc---------------CCeEEEeeCCC-CC--CCC
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR---------------GHEVLVADAVN-LP--YRS 177 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~---------------~~~~~~~d~~~-~~--~~~ 177 (377)
++++.+|||||||+|.++. ..++..|+|+|+|+.+++.++++ ++.++.+|+.+ ++ +++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 4567899999999999753 36778999999999999887642 57899999987 55 668
Q ss_pred CceeEEEeccchhhcCChHH----------HHHHHHHHHHccccCcEEEEEE
Q 017080 178 DFGDAAISIAVLHHLSTESR----------RKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 178 ~~fD~V~~~~~l~h~~~~~~----------~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+++|.|+.. +++..- ...+++++.++|||||.+++.+
T Consensus 127 ~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 899999854 333100 0489999999999999999965
No 175
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.29 E-value=5e-12 Score=114.15 Aligned_cols=104 Identities=9% Similarity=0.098 Sum_probs=82.6
Q ss_pred HHHHHHHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCC
Q 017080 111 PKVATFLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSD 178 (377)
Q Consensus 111 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~ 178 (377)
+++......++++.+|||||||+|.++. ..+...|+++|+++.+++.|+++ .+.+..+|..+...++.
T Consensus 10 ~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~ 89 (244)
T 3gnl_A 10 KRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKD 89 (244)
T ss_dssp HHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccc
Confidence 3444555567888999999999999742 35667999999999999999987 26889999887554444
Q ss_pred ceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 179 FGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 179 ~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+||+|++.++...+ ...+|.+..+.|+++|+++++-
T Consensus 90 ~~D~IviagmGg~l-----I~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 90 AIDTIVIAGMGGTL-----IRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp CCCEEEEEEECHHH-----HHHHHHHTGGGGTTCCEEEEEE
T ss_pred cccEEEEeCCchHH-----HHHHHHHHHHHhCCCCEEEEEc
Confidence 69999887665533 5688999999999999999885
No 176
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.29 E-value=3.1e-12 Score=115.12 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=79.2
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-CCC--CCceeEE
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-PYR--SDFGDAA 183 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~~~--~~~fD~V 183 (377)
...++.+|||||||+|.++. ..++.+|+++|+|+.+++.|+++ ++.+..+|+... +.. +++||+|
T Consensus 51 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 51 KMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred hccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 34567899999999999653 36688999999999999999876 378888888774 332 5789999
Q ss_pred EeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 184 ISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++....+ + ...+++++.++|||||.+++.++.
T Consensus 131 ~~~~~~~---~---~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 131 FIDAAKG---Q---YRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EEEGGGS---C---HHHHHHHHGGGEEEEEEEEEETTT
T ss_pred EECCCHH---H---HHHHHHHHHHHcCCCeEEEEEcCC
Confidence 9977653 4 789999999999999999997543
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.28 E-value=7.9e-12 Score=113.73 Aligned_cols=98 Identities=13% Similarity=0.184 Sum_probs=77.3
Q ss_pred CCCEEEEECCccCcccc----c--CCCceEEEEeCCHHHHHHHHHc---C------------------------------
Q 017080 122 SGSLVLDAGCGNGKYLG----L--NPDCFFVGCDISPSLIKICVDR---G------------------------------ 162 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~----~--~~~~~v~gvD~s~~~~~~a~~~---~------------------------------ 162 (377)
++.+|||+|||+|.++. . .++.+|+|+|+|+.+++.|+++ .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 56799999999999652 2 3567999999999999999854 2
Q ss_pred ---Ce-------------EEEeeCCCCCC-----CCCceeEEEeccchhhcCC------hHHHHHHHHHHHHccccCcEE
Q 017080 163 ---HE-------------VLVADAVNLPY-----RSDFGDAAISIAVLHHLST------ESRRKKAIEELVRVVKKGSLV 215 (377)
Q Consensus 163 ---~~-------------~~~~d~~~~~~-----~~~~fD~V~~~~~l~h~~~------~~~~~~~l~~~~r~LkpgG~l 215 (377)
++ +.++|+.+... ..++||+|+++..+.+..+ .+....+++++.++|||||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 45 99999887421 3458999999877766544 233679999999999999999
Q ss_pred EEEE
Q 017080 216 LITV 219 (377)
Q Consensus 216 ~i~~ 219 (377)
++..
T Consensus 211 ~~~~ 214 (250)
T 1o9g_A 211 AVTD 214 (250)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9853
No 178
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.28 E-value=2.3e-12 Score=116.21 Aligned_cols=93 Identities=14% Similarity=0.186 Sum_probs=62.9
Q ss_pred CCCCEEEEECCccCccccc--CCC-ceEEEEeCCHHHHHHHHHcCCeEEEe---eCCCCC---CCCCceeEEEeccchhh
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPD-CFFVGCDISPSLIKICVDRGHEVLVA---DAVNLP---YRSDFGDAAISIAVLHH 191 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~---d~~~~~---~~~~~fD~V~~~~~l~h 191 (377)
.++.+|||||||||.++.. ..+ .+|+|+|+|+.|++.++++.-+.... ++.... ++...||.+.+..++.+
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 4577999999999997642 224 49999999999999988763332221 121111 11222455555444444
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+ ..+|++++|+|||||.+++..
T Consensus 116 l------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 116 L------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp G------GGTHHHHHHHSCTTCEEEEEE
T ss_pred H------HHHHHHHHHhccCCCEEEEEE
Confidence 3 479999999999999999964
No 179
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.28 E-value=8e-12 Score=111.65 Aligned_cols=102 Identities=11% Similarity=0.106 Sum_probs=79.3
Q ss_pred HHHHHHhCCCCCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC-CCCCCC
Q 017080 112 KVATFLNSLPSGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVN-LPYRSD 178 (377)
Q Consensus 112 ~~~~~l~~~~~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~-~~~~~~ 178 (377)
++......++++.+|||||||+|.++ ...|..+|+++|+++.+++.|+++ ++++..+|..+ ++. .+
T Consensus 5 RL~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~ 83 (225)
T 3kr9_A 5 RLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TD 83 (225)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GG
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-Cc
Confidence 34444456678899999999999964 235677999999999999999987 36789999854 332 23
Q ss_pred ceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 179 FGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 179 ~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+||+|+..++-..+ ...+|.+..+.|+|+|+++++-
T Consensus 84 ~~D~IviaG~Gg~~-----i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 84 QVSVITIAGMGGRL-----IARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp CCCEEEEEEECHHH-----HHHHHHHTGGGCTTCCEEEEEE
T ss_pred CCCEEEEcCCChHH-----HHHHHHHHHHHhCCCCEEEEEC
Confidence 69999887654432 5689999999999999988864
No 180
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.27 E-value=4.8e-12 Score=111.95 Aligned_cols=94 Identities=17% Similarity=0.112 Sum_probs=74.9
Q ss_pred CCCCCEEEEECCccCccc----ccCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-CCCCCceeEEEe
Q 017080 120 LPSGSLVLDAGCGNGKYL----GLNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-PYRSDFGDAAIS 185 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~----~~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~~~~~~fD~V~~ 185 (377)
..++.+|||||||+|..+ ...+ +.+|+++|+|+.+++.|+++ +++++.+|+.+. +..++ ||+|++
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 346679999999999864 2344 78999999999999999865 378899998763 44456 999998
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
... ..+ ...+++++.++|||||.+++.+.
T Consensus 133 ~~~---~~~---~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 133 DCD---VFN---GADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ETT---TSC---HHHHHHHHGGGEEEEEEEEEESS
T ss_pred cCC---hhh---hHHHHHHHHHhcCCCeEEEEECc
Confidence 742 334 78999999999999999988653
No 181
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.27 E-value=9.9e-12 Score=117.24 Aligned_cols=107 Identities=12% Similarity=0.149 Sum_probs=80.5
Q ss_pred HHhCCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEE
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAA 183 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V 183 (377)
.+..+.++.+|||+|||+|..+. . .+..+|+|+|+|+.+++.++++ ++.++++|+..++..+++||+|
T Consensus 112 ~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 112 VALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp HHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEE
T ss_pred HHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEE
Confidence 33456788999999999999642 2 3457999999999999998876 4688889998876556789999
Q ss_pred Eec------cchhhcCCh------H-------HHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 184 ISI------AVLHHLSTE------S-------RRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 184 ~~~------~~l~h~~~~------~-------~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++. +++++.++. + ....+|+++.++|||||++++++...
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 984 334433321 0 02589999999999999999987654
No 182
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.26 E-value=2.2e-12 Score=116.63 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=75.5
Q ss_pred CCCEEEEECCccCcccc----c----CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCC---CCCC-CceeEEEecc
Q 017080 122 SGSLVLDAGCGNGKYLG----L----NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNL---PYRS-DFGDAAISIA 187 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~----~----~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~---~~~~-~~fD~V~~~~ 187 (377)
++.+|||||||+|..+. . .++++|+|+|+|+.+++.|+.. +++++++|+.+. +..+ .+||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 45799999999999642 2 4688999999999998877643 689999999884 5433 4799999876
Q ss_pred chhhcCChHHHHHHHHHHHH-ccccCcEEEEEEc
Q 017080 188 VLHHLSTESRRKKAIEELVR-VVKKGSLVLITVW 220 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r-~LkpgG~l~i~~~ 220 (377)
. |. + ...++.++.+ +|||||++++.+.
T Consensus 161 ~--~~-~---~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 161 A--HA-N---TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp S--CS-S---HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred c--hH-h---HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 5 42 4 7889999997 9999999999764
No 183
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.26 E-value=1.4e-12 Score=119.94 Aligned_cols=98 Identities=17% Similarity=0.107 Sum_probs=73.2
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc---------CCeEE--EeeCCCCCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR---------GHEVL--VADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~---------~~~~~--~~d~~~~~~~~~~fD~V~~ 185 (377)
.+.++.+|||||||+|.++.. .. .+|+|+|+|+ |+..++++ ++.++ ++|+.+++ +++||+|+|
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMC 146 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEE
Confidence 467889999999999998642 22 7999999999 53222211 46788 88998876 789999999
Q ss_pred ccchhhcCChH--HH--HHHHHHHHHccccCc--EEEEEEcC
Q 017080 186 IAVLHHLSTES--RR--KKAIEELVRVVKKGS--LVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~--~~--~~~l~~~~r~LkpgG--~l~i~~~~ 221 (377)
..+ ++..+.. .. ..+|+++.++||||| .+++.++.
T Consensus 147 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 877 5544411 01 148999999999999 99998776
No 184
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.26 E-value=7.9e-12 Score=124.41 Aligned_cols=96 Identities=17% Similarity=0.108 Sum_probs=79.8
Q ss_pred CCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 121 PSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.++.+|||||||+|.++. ..+..+|+|+|+|+ +++.|+++ +++++.+|+.+++++ ++||+|++..++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 467899999999999753 25567999999998 88888764 478999999987664 589999999898
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+|+.++. ....+.++.++|||||.+++..
T Consensus 235 ~~~~~e~-~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 235 YMLFNER-MLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHTCHH-HHHHHHHGGGGEEEEEEEESCE
T ss_pred HhcCcHH-HHHHHHHHHHhcCCCCEEEEEe
Confidence 9987754 5678889999999999998643
No 185
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.26 E-value=2.1e-11 Score=109.04 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=73.7
Q ss_pred CCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCC---CCCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLP---YRSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~---~~~~~fD~V~~~ 186 (377)
+.++.+|||+|||+|.++. . .++.+|+|+|+|+.+++.++++ ++.++.+|+.+.. ...++||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 4578899999999999753 2 3567999999999988877654 6889999998732 124689999986
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.. .++ ....+++++.++|||||.+++.
T Consensus 151 ~~---~~~--~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 151 VA---QPT--QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CC---STT--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC---CHh--HHHHHHHHHHHhcCCCCEEEEE
Confidence 54 222 1445699999999999999998
No 186
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.26 E-value=3.8e-12 Score=110.99 Aligned_cols=104 Identities=20% Similarity=0.211 Sum_probs=74.5
Q ss_pred HHHhCCCCCCEEEEECCccCcccc----cCCC---------ceEEEEeCCHHHHHHHHHcCCeEE-EeeCCCCC------
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYLG----LNPD---------CFFVGCDISPSLIKICVDRGHEVL-VADAVNLP------ 174 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~~----~~~~---------~~v~gvD~s~~~~~~a~~~~~~~~-~~d~~~~~------ 174 (377)
.....+.++.+|||+|||+|.++. ..+. .+|+|+|+|+.+. ..+++++ .+|+...+
T Consensus 15 ~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~----~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 15 ERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP----LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp HHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC----CTTCEEECSCCTTSHHHHHHHH
T ss_pred HhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc----CCCCeEEEeccCCCHHHHHHHH
Confidence 334456788999999999999753 2332 7999999998431 1257888 88887643
Q ss_pred --CCCCceeEEEeccchhh----cCChHH----HHHHHHHHHHccccCcEEEEEEcCC
Q 017080 175 --YRSDFGDAAISIAVLHH----LSTESR----RKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 175 --~~~~~fD~V~~~~~l~h----~~~~~~----~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+++++||+|++..++++ ..+... ...+++++.++|||||.+++.++..
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 34568999999664443 232110 1488999999999999999988754
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.25 E-value=4.2e-12 Score=113.67 Aligned_cols=92 Identities=7% Similarity=0.014 Sum_probs=73.1
Q ss_pred CCEEEEECCccCccc----cc-CCCceEEEEeCCHHHHHHHHHc---------CCeEEEeeCCCC-C-CCCCceeEEEec
Q 017080 123 GSLVLDAGCGNGKYL----GL-NPDCFFVGCDISPSLIKICVDR---------GHEVLVADAVNL-P-YRSDFGDAAISI 186 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~----~~-~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~~d~~~~-~-~~~~~fD~V~~~ 186 (377)
+.+|||||||+|..+ .. .++.+|+++|+|+.+++.|+++ +++++.+|+.+. + +++++||+|++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 349999999999854 22 3578999999999999999875 367888888763 2 447899999987
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
... .+ ...+++++.++|||||++++.+.
T Consensus 137 ~~~---~~---~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 137 VSP---MD---LKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp CCT---TT---HHHHHHHHHHHEEEEEEEEETTT
T ss_pred CcH---HH---HHHHHHHHHHHcCCCcEEEEeCC
Confidence 543 23 67899999999999999998543
No 188
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.25 E-value=1.1e-12 Score=121.33 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=73.2
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc---------CCeEE--EeeCCCCCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR---------GHEVL--VADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~---------~~~~~--~~d~~~~~~~~~~fD~V~~ 185 (377)
.+.++.+|||+|||+|.++.. .. .+|+|+|+|+ |+..++++ ++.++ ++|+.+++ +++||+|+|
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 356789999999999998642 22 7999999999 54333221 46788 88998876 789999999
Q ss_pred ccchhhcCChH--HH--HHHHHHHHHccccCc--EEEEEEcC
Q 017080 186 IAVLHHLSTES--RR--KKAIEELVRVVKKGS--LVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~--~~--~~~l~~~~r~LkpgG--~l~i~~~~ 221 (377)
..+ ++..+.. .. ..+|+++.++||||| .+++.++.
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 877 5443311 01 147999999999999 99998776
No 189
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.25 E-value=8e-13 Score=120.53 Aligned_cols=98 Identities=8% Similarity=0.062 Sum_probs=68.8
Q ss_pred CCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC---CCC---CCceeEE
Q 017080 122 SGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL---PYR---SDFGDAA 183 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~---~~~---~~~fD~V 183 (377)
++.+|||+|||+|.++. ..++.+|+|+|+|+.|++.|+++ +++++.+|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 56799999999998642 24678999999999999999876 278999998762 344 2689999
Q ss_pred EeccchhhcCC------------hHHHHHHHHHHHHccccCcEEEEEE
Q 017080 184 ISIAVLHHLST------------ESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 184 ~~~~~l~h~~~------------~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+++-.+++... .+....++.+++++|||||.+.+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 99865554330 0002356789999999999987653
No 190
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.25 E-value=2.1e-11 Score=113.09 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=74.8
Q ss_pred CCCCEEEEECCccCcccc---cCCCceEEEEeC-CHHHHHHHHHc-----------------CCeEEEeeCCCCC--C--
Q 017080 121 PSGSLVLDAGCGNGKYLG---LNPDCFFVGCDI-SPSLIKICVDR-----------------GHEVLVADAVNLP--Y-- 175 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~-s~~~~~~a~~~-----------------~~~~~~~d~~~~~--~-- 175 (377)
.++.+|||||||+|.++. .....+|+|+|+ |+.+++.++++ ++.+...|..+.. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 467899999999999653 233349999999 89999988765 2445544444321 1
Q ss_pred --CCCceeEEEeccchhhcCChHHHHHHHHHHHHccc---c--CcEEEEEE
Q 017080 176 --RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVK---K--GSLVLITV 219 (377)
Q Consensus 176 --~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~Lk---p--gG~l~i~~ 219 (377)
++++||+|++..+++|.++ ...+++.+.++|+ | ||.+++..
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~---~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQA---HDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGG---HHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hccCCCCCEEEEeCcccChHH---HHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 3678999999999999887 8899999999999 9 99987754
No 191
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.25 E-value=6.1e-12 Score=112.25 Aligned_cols=103 Identities=14% Similarity=0.018 Sum_probs=78.6
Q ss_pred HHHHHhCCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C-CC-
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P-YR- 176 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~~- 176 (377)
++..+....++.+|||||||+|..+. ..+ +.+|+++|+++.+++.|+++ +++++++|+.+. + ++
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 128 (223)
T 3duw_A 49 FLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIEN 128 (223)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 33444344577899999999999653 344 78999999999999998875 378899998653 1 11
Q ss_pred --CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 177 --SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 177 --~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.++||+|++..... . ...+++++.++|||||++++.+..
T Consensus 129 ~~~~~fD~v~~d~~~~---~---~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 129 EKYEPFDFIFIDADKQ---N---NPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp TTCCCCSEEEECSCGG---G---HHHHHHHHHHTCCTTCEEEEESCS
T ss_pred cCCCCcCEEEEcCCcH---H---HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 26799999876532 2 578999999999999988887544
No 192
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.25 E-value=9.1e-12 Score=111.59 Aligned_cols=99 Identities=20% Similarity=0.266 Sum_probs=78.5
Q ss_pred HHHHHh-CCCCCCEEEEECCccCccccc----CC------CceEEEEeCCHHHHHHHHHc------------CCeEEEee
Q 017080 113 VATFLN-SLPSGSLVLDAGCGNGKYLGL----NP------DCFFVGCDISPSLIKICVDR------------GHEVLVAD 169 (377)
Q Consensus 113 ~~~~l~-~~~~~~~vLDiGcG~G~~~~~----~~------~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d 169 (377)
+...+. .+.++.+|||||||+|.++.. .. ..+|+++|+++.+++.++++ ++.+..+|
T Consensus 74 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 153 (227)
T 1r18_A 74 ALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD 153 (227)
T ss_dssp HHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC
T ss_pred HHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC
Confidence 344443 467889999999999997532 22 35999999999999988764 47889999
Q ss_pred CCCCCCCC-CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 170 AVNLPYRS-DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 170 ~~~~~~~~-~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+.. ++++ ++||+|++..+++|+. +++.+.|||||++++....
T Consensus 154 ~~~-~~~~~~~fD~I~~~~~~~~~~---------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 154 GRK-GYPPNAPYNAIHVGAAAPDTP---------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGG-CCGGGCSEEEEEECSCBSSCC---------HHHHHTEEEEEEEEEEESC
T ss_pred ccc-CCCcCCCccEEEECCchHHHH---------HHHHHHhcCCCEEEEEEec
Confidence 887 4444 7899999999998875 4688999999999998754
No 193
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=1.5e-11 Score=113.57 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=82.0
Q ss_pred HHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
.+..+.++.+|||+|||+|.++. ..+..+|+|+|+|+.+++.|+++ ++.++.+|+.+++. .++||+|+
T Consensus 113 ~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi 191 (272)
T 3a27_A 113 MAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVI 191 (272)
T ss_dssp HHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEE
T ss_pred HHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEE
Confidence 34557788999999999999753 24567999999999999999875 46899999988743 67899999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+.... + ...++.++.+.|||||+++++++..
T Consensus 192 ~d~p~----~---~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 192 MGYVH----K---THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ECCCS----S---GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCcc----c---HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 97654 3 5689999999999999999988754
No 194
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.24 E-value=1.9e-11 Score=119.48 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=74.3
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHH-------HHc---------CCeEEEeeCCCC--CC-
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKIC-------VDR---------GHEVLVADAVNL--PY- 175 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a-------~~~---------~~~~~~~d~~~~--~~- 175 (377)
.+.++.+|||||||+|.++. ..+..+|+|+|+|+.+++.| +++ +++++.+|.... ++
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 45688999999999999753 23556899999999998888 543 356677654422 22
Q ss_pred -CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 176 -RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 176 -~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
..++||+|++..++ +.++ +..+|+++.++|||||.+++.+.
T Consensus 319 ~~~~~FDvIvvn~~l-~~~d---~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-FDED---LNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HHGGGCSEEEECCTT-CCHH---HHHHHHHHHTTCCTTCEEEESSC
T ss_pred cccCCCCEEEEeCcc-cccc---HHHHHHHHHHhCCCCeEEEEeec
Confidence 25789999998766 3333 78899999999999999998753
No 195
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.24 E-value=3.6e-12 Score=121.04 Aligned_cols=99 Identities=13% Similarity=0.017 Sum_probs=76.2
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----C-----CeEEEeeCCCCCC----CCCceeEEE
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----G-----HEVLVADAVNLPY----RSDFGDAAI 184 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~-----~~~~~~d~~~~~~----~~~~fD~V~ 184 (377)
..++.+|||+|||+|.++.. ..+++|+++|+|+.+++.|+++ + ++++++|+.++.. ..++||+|+
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred cCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 34678999999999997532 3456999999999999999876 2 6788899877431 156899999
Q ss_pred eccc----------hhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 185 SIAV----------LHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 185 ~~~~----------l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+.-. +++..+ ...+++++.++|||||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~---~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDH---LPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHH---HHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHH---HHHHHHHHHHhcCcCcEEEEEECC
Confidence 9422 223333 779999999999999998887644
No 196
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.23 E-value=1.6e-11 Score=116.72 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=74.9
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc------------------CCeEEEeeCCCC--
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR------------------GHEVLVADAVNL-- 173 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~------------------~~~~~~~d~~~~-- 173 (377)
.+.++.+|||+|||+|.++. . .+..+|+|+|+++.+++.|+++ ++++..+|+.+.
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 46788999999999999753 2 4668999999999999998874 478899999886
Q ss_pred CCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 174 PYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 174 ~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
++++++||+|++. +++ +..+++++.++|||||.+++..+..
T Consensus 182 ~~~~~~fD~V~~~-----~~~---~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 182 DIKSLTFDAVALD-----MLN---PHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp ------EEEEEEC-----SSS---TTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred ccCCCCeeEEEEC-----CCC---HHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 4667789999984 344 4568999999999999999887653
No 197
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.23 E-value=5.1e-12 Score=112.83 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=78.5
Q ss_pred HHHHHhCCCCCCEEEEECCccCccc----ccCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C-CCC
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYL----GLNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P-YRS 177 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~----~~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~~~ 177 (377)
++..+....++.+|||||||+|..+ ...+ +.+|+++|+|+.+++.++++ +++++++|+.+. + +..
T Consensus 55 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (225)
T 3tr6_A 55 LLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIH 134 (225)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhh
Confidence 3334444456789999999999964 2344 78999999999999999876 378899998653 2 111
Q ss_pred ----CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 178 ----DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 178 ----~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++||+|++... ..+ ...+++++.++|||||++++.+..
T Consensus 135 ~~~~~~fD~v~~~~~---~~~---~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 135 AGQAWQYDLIYIDAD---KAN---TDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp TTCTTCEEEEEECSC---GGG---HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccCCCCccEEEECCC---HHH---HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 78999997653 222 678999999999999999997654
No 198
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.23 E-value=1.3e-11 Score=111.15 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=75.5
Q ss_pred CCCCCCEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCC-ceeEEEec
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSD-FGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~-~fD~V~~~ 186 (377)
.+.++.+|||||||+|.++.. .+ .+|+|+|+|+.+++.++++ ++.+..+|+ ..+++++ +||+|++.
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~ 165 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVT 165 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEEC
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEEC
Confidence 466788999999999997532 33 7999999999999999875 477888887 3344444 59999999
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
.+++++++ ++.+.|||||++++.....
T Consensus 166 ~~~~~~~~---------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 166 AGAPKIPE---------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SBBSSCCH---------HHHHTEEEEEEEEEEECSS
T ss_pred CcHHHHHH---------HHHHhcCCCcEEEEEEecC
Confidence 99988763 5789999999999998654
No 199
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.22 E-value=2.2e-11 Score=116.75 Aligned_cols=104 Identities=16% Similarity=0.064 Sum_probs=83.0
Q ss_pred hCCCCCCEEEEECCccCccccc----C-CCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 118 NSLPSGSLVLDAGCGNGKYLGL----N-PDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~~----~-~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
....++.+|||+|||+|.++.. . +...++|+|+|+.+++.|+++ ++++.++|+.+++.+.++||+|++
T Consensus 199 ~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 199 ADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp TTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEE
T ss_pred hCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEE
Confidence 3456788999999999997532 3 778999999999999999987 489999999998877788999999
Q ss_pred ccchhhcCC-h----HHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 186 IAVLHHLST-E----SRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~-~----~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+-....... . +....+++++.++|||||.+++.++.
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 654432111 0 11368999999999999999998764
No 200
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.21 E-value=2.2e-11 Score=112.49 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=78.9
Q ss_pred CCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~ 185 (377)
.+.++.+|||+|||+|.++. . .++.+|+++|+|+.+++.|+++ ++.+..+|+.+. +++++||+|++
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEE
Confidence 46788999999999998642 2 5678999999999999999876 367888898876 56788999998
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+.++ +..+++++.++|+|||.+++.++.
T Consensus 188 -----~~~~---~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 188 -----DVPD---PWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp -----CCSC---GGGTHHHHHHHEEEEEEEEEEESS
T ss_pred -----CCcC---HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3566 668999999999999999998754
No 201
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.21 E-value=3.2e-11 Score=109.05 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=77.7
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.+.++.+|||+|||+|.++.. ..+.+|+++|+|+.+++.|+++ ++++..+|+.+..+++++||+|++
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~--- 164 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFV--- 164 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEE---
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEE---
Confidence 456889999999999986532 1177999999999999999875 467888888875435778999998
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+.++ +..+++++.++|||||.+++..+.
T Consensus 165 --~~~~---~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 165 --DVRE---PWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp --CSSC---GGGGHHHHHHHBCTTCEEEEEESS
T ss_pred --CCcC---HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3455 668999999999999999998865
No 202
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.21 E-value=2.8e-11 Score=112.90 Aligned_cols=99 Identities=20% Similarity=0.174 Sum_probs=73.6
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCCCC-CCCCCceeEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------------GHEVLVADAVNL-PYRSDFGDAA 183 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~~-~~~~~~fD~V 183 (377)
+++.+|||||||+|.++. ..+..+|+++|+|+.+++.|+++ +++++++|+... ...+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 456899999999998753 24567999999999999999874 478999998774 3456899999
Q ss_pred EeccchhhcCChHHH--HHHHHHHHHccccCcEEEEEEc
Q 017080 184 ISIAVLHHLSTESRR--KKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~--~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++...-...+... . ..+++++.++|||||++++...
T Consensus 162 i~D~~~p~~~~~~-l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGES-LFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchh-ccHHHHHHHHHHhcCCCCEEEEecC
Confidence 9965543322210 1 6899999999999999999763
No 203
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.20 E-value=5.7e-11 Score=104.09 Aligned_cols=92 Identities=22% Similarity=0.194 Sum_probs=70.1
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
..++.+|||+|||+|.++.. .+..+|+|+|+|+.+++.++++ +++++++|+.+++ ++||+|++...++|+.+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 44678999999999997532 3334799999999999999988 6999999999874 78999999999999875
Q ss_pred hHHHHHHHHHHHHccccCcEEEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.. ...+++++.+++ |+ +++.
T Consensus 126 ~~-~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 126 HS-DRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp ---CHHHHHHHHHHE--EE-EEEE
T ss_pred ch-hHHHHHHHHHhc--Cc-EEEE
Confidence 32 357899999998 44 4444
No 204
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.20 E-value=1.9e-12 Score=117.61 Aligned_cols=103 Identities=17% Similarity=0.066 Sum_probs=78.3
Q ss_pred HHHHHhCCCCCCEEEEECCccCccc----ccC-CCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-CCC--
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYL----GLN-PDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-PYR-- 176 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~----~~~-~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~~~-- 176 (377)
++..+....++.+|||||||+|..+ ... ++.+|+++|+|+.+++.|+++ +++++++|+.+. +..
T Consensus 51 ~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~ 130 (242)
T 3r3h_A 51 FMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLN 130 (242)
T ss_dssp HHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhh
Confidence 3333434456789999999999864 223 478999999999998777765 478999998763 211
Q ss_pred ---CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 177 ---SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 177 ---~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++||+|++... ..+ ...+++++.++|||||++++.+..
T Consensus 131 ~~~~~~fD~V~~d~~---~~~---~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 131 EGGEHQFDFIFIDAD---KTN---YLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHCSSCEEEEEEESC---GGG---HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccCCCCEeEEEEcCC---hHH---hHHHHHHHHHhcCCCeEEEEECCc
Confidence 478999998764 222 678999999999999999997654
No 205
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.19 E-value=1.2e-11 Score=112.55 Aligned_cols=102 Identities=16% Similarity=0.076 Sum_probs=78.4
Q ss_pred HHHHHhCCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C-C--
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P-Y-- 175 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~-- 175 (377)
++..+....++.+|||||||+|..+. ..+ +.+|+++|+|+.+++.|+++ +++++.+|+.+. + +
T Consensus 70 ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~ 149 (247)
T 1sui_A 70 FLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIK 149 (247)
T ss_dssp HHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHh
Confidence 33333344567899999999998642 234 78999999999999999875 367899998763 3 2
Q ss_pred ---CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 176 ---RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 176 ---~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++++||+|++... ..+ ...+++++.++|||||++++.+.
T Consensus 150 ~~~~~~~fD~V~~d~~---~~~---~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 150 DEKNHGSYDFIFVDAD---KDN---YLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp SGGGTTCBSEEEECSC---STT---HHHHHHHHHHHBCTTCCEEEECT
T ss_pred ccCCCCCEEEEEEcCc---hHH---HHHHHHHHHHhCCCCeEEEEecC
Confidence 2578999998754 233 67899999999999999988753
No 206
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.18 E-value=1.3e-11 Score=118.53 Aligned_cols=96 Identities=21% Similarity=0.172 Sum_probs=73.6
Q ss_pred CCCCEEEEECCccCcccc--cCCC-ceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 121 PSGSLVLDAGCGNGKYLG--LNPD-CFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~--~~~~-~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
-+|++|||||||+|.++- ...| .+|+|||.|+ +++.|++. .+.++.+|++++.++ ++||+|++-.+-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 368899999999999753 2334 4899999996 67777654 478999999998775 689999995544
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
..+..+.....++....++|||||.++-.
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccchhhhHHHHHHhhCCCCceECCc
Confidence 44443322788999999999999987653
No 207
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.18 E-value=3.3e-11 Score=111.38 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=79.6
Q ss_pred HHhCCCCCCEEEEECCccCcccc----cCCC-ceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCC----CCCc
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYLG----LNPD-CFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPY----RSDF 179 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~~----~~~~-~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~----~~~~ 179 (377)
.+....++.+|||+|||+|..+. ..++ .+|+|+|+|+.+++.++++ ++.++.+|+..++. ..++
T Consensus 77 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 77 IVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCC
T ss_pred HHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcccc
Confidence 33456788999999999999652 2355 7999999999999998876 47788889877653 2678
Q ss_pred eeEEEec------cchhh------------cCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 180 GDAAISI------AVLHH------------LSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 180 fD~V~~~------~~l~h------------~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
||+|++. +++.+ ... ...+|+++.++|||||.+++++.+.
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLR---QKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTC---HHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHH---HHHHHHHHHHhCCCCCEEEEEECCC
Confidence 9999986 22221 123 5789999999999999999987654
No 208
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=3.3e-11 Score=112.97 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=76.5
Q ss_pred CEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCC--CCCCCceeEEEeccchh
Q 017080 124 SLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNL--PYRSDFGDAAISIAVLH 190 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~--~~~~~~fD~V~~~~~l~ 190 (377)
.+|||||||+|.++.. .|+.+|++||+++.+++.|+++ +++++++|+..+ .+++++||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999997642 6888999999999999999986 478899998764 24578999999964333
Q ss_pred hcCChH-HHHHHHHHHHHccccCcEEEEEEcC
Q 017080 191 HLSTES-RRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 191 h~~~~~-~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.-.... ....++++++++|||||++++....
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 211110 0158999999999999999988753
No 209
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.15 E-value=1.3e-10 Score=114.82 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=83.1
Q ss_pred HhCCCCCCEEEEECCccCcccc----cCCC-ceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC--CCCCceeE
Q 017080 117 LNSLPSGSLVLDAGCGNGKYLG----LNPD-CFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP--YRSDFGDA 182 (377)
Q Consensus 117 l~~~~~~~~vLDiGcG~G~~~~----~~~~-~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~ 182 (377)
+....++.+|||+|||+|..+. ..++ ..|+++|+|+.+++.++++ ++.+.++|+..++ +++++||+
T Consensus 254 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 254 VLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred hcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCE
Confidence 3456788999999999998642 2444 7999999999999988876 4678889998876 55578999
Q ss_pred EEe------ccchhhcCChH------H-------HHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 183 AIS------IAVLHHLSTES------R-------RKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 183 V~~------~~~l~h~~~~~------~-------~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
|++ .+++++.++.. + ...+|+++.++|||||.+++++.+..
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 996 44555555421 0 15789999999999999999987654
No 210
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.15 E-value=3.8e-11 Score=108.14 Aligned_cols=101 Identities=21% Similarity=0.177 Sum_probs=77.0
Q ss_pred HHHhCCCCCCEEEEECCccCccc----ccCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC----CCCCC
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYL----GLNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVN----LPYRS 177 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~----~~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~----~~~~~ 177 (377)
..+....++.+|||||||+|..+ ...+ +.+|+++|+|+.+++.|+++ ++++..+|+.+ ++..+
T Consensus 65 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 65 GLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGK 144 (232)
T ss_dssp HHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSS
T ss_pred HHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC
Confidence 33333446789999999999864 2233 67999999999999999875 37788888754 22223
Q ss_pred --CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 178 --DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 178 --~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++||+|++.... .+ ...+++++.++|||||++++.+..
T Consensus 145 ~~~~fD~V~~d~~~---~~---~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 145 PLPEFDLIFIDADK---RN---YPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp SCCCEEEEEECSCG---GG---HHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CCCCcCEEEECCCH---HH---HHHHHHHHHHHcCCCeEEEEeCCC
Confidence 789999987652 23 678999999999999999997644
No 211
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.14 E-value=4.1e-11 Score=108.21 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=76.1
Q ss_pred CCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C----------
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P---------- 174 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~---------- 174 (377)
.+.++.+|||||||+|.++. ..+ +.+|+++|+|+.+++.|+++ ++.+..+|+.+. +
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 34567899999999999653 234 78999999999999999876 278888887652 2
Q ss_pred ----CCC--CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 175 ----YRS--DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 175 ----~~~--~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+++ ++||+|++..... + ...+++++.++|||||++++.+..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~---~---~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE---N---YPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG---G---HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccccccCCCCCcCEEEEeCCHH---H---HHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 7899999986533 2 568899999999999999997643
No 212
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.12 E-value=4.6e-11 Score=106.87 Aligned_cols=102 Identities=16% Similarity=0.107 Sum_probs=77.6
Q ss_pred HHHHhCCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C-CCC-
Q 017080 114 ATFLNSLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P-YRS- 177 (377)
Q Consensus 114 ~~~l~~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~~~- 177 (377)
+..+..+.++.+|||||||+|.++. ..+ +.+|+++|+|+.+++.|+++ +++++.+|+.+. + +.+
T Consensus 61 l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~ 140 (229)
T 2avd_A 61 LANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA 140 (229)
T ss_dssp HHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhc
Confidence 3333445577899999999998642 234 78999999999999999875 478888888653 1 211
Q ss_pred ---CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 178 ---DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 178 ---~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++||+|++... ..+ ...+++++.++|+|||.+++.+..
T Consensus 141 ~~~~~~D~v~~d~~---~~~---~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 141 GEAGTFDVAVVDAD---KEN---CSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp TCTTCEEEEEECSC---STT---HHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCCCCccEEEECCC---HHH---HHHHHHHHHHHcCCCeEEEEECCC
Confidence 78999999654 223 678999999999999999987543
No 213
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.12 E-value=1.1e-10 Score=105.23 Aligned_cols=98 Identities=21% Similarity=0.358 Sum_probs=78.9
Q ss_pred CCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc----C--CeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR----G--HEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~----~--~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.+++..+|||||||+|-++. ..|...|+++|+++.+++.++.+ + .++.+.|...-+ +.++||+|++.-+
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkt 207 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKT 207 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTC
T ss_pred ccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHH
Confidence 45667899999999999863 35888999999999999999887 3 456777776644 5778999999999
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
++|+.+.. ....+ ++.+.|+|+|.++-..
T Consensus 208 i~~Le~q~-kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 208 LPCLETQQ-RGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHHHHS-TTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHhhhhh-hHHHH-HHHHHhCCCCEEEecc
Confidence 99998754 33555 9999999998766553
No 214
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.11 E-value=1.2e-10 Score=108.06 Aligned_cols=96 Identities=17% Similarity=0.167 Sum_probs=71.7
Q ss_pred CCCCCCEEEEECC------ccCc-cc-ccCC-CceEEEEeCCHHHHHHHHHcCCeE-EEeeCCCCCCCCCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGC------GNGK-YL-GLNP-DCFFVGCDISPSLIKICVDRGHEV-LVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGc------G~G~-~~-~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.++++.+|||+|| |+|. .+ ...+ +.+|+|+|+|+. + .++++ +++|+.+++++ ++||+|++...
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v-----~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~ 132 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V-----SDADSTLIGDCATVHTA-NKWDLIISDMY 132 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B-----CSSSEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C-----CCCEEEEECccccCCcc-CcccEEEEcCC
Confidence 4678899999999 4464 22 2233 689999999998 2 36999 99999987753 78999999754
Q ss_pred hh--------hcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 189 LH--------HLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 189 l~--------h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.+ +....+....+++++.++|||||.+++.++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 22 1111122568999999999999999998754
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.11 E-value=1.1e-10 Score=110.67 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=75.3
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCCC--CCCCCceeE
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVNL--PYRSDFGDA 182 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~~--~~~~~~fD~ 182 (377)
.+++.+|||||||+|.++. ..+..+|+++|+|+.+++.|+++ +++++++|+.++ ..++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3566899999999999653 24567999999999999998864 477899998763 234678999
Q ss_pred EEeccchhhcCChH-HHHHHHHHHHHccccCcEEEEEE
Q 017080 183 AISIAVLHHLSTES-RRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 183 V~~~~~l~h~~~~~-~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
|++.....+-.... ....+++++.++|||||++++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99965421111100 02689999999999999999873
No 216
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.11 E-value=1.3e-10 Score=103.83 Aligned_cols=96 Identities=21% Similarity=0.262 Sum_probs=76.6
Q ss_pred CCCCCEEEEECCccCcccc-cCCCceEEEEeCCHHHHHHHHHc----C--CeEEEeeCCCCCCCCCceeEEEeccchhhc
Q 017080 120 LPSGSLVLDAGCGNGKYLG-LNPDCFFVGCDISPSLIKICVDR----G--HEVLVADAVNLPYRSDFGDAAISIAVLHHL 192 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~-~~~~~~v~gvD~s~~~~~~a~~~----~--~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~ 192 (377)
..++.+|||||||+|.++- ..+...|+|+|+++.+++.++++ + ..+.++|....+. .++||+|++.-++||+
T Consensus 103 ~~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~-~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 103 AETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP-AEAGDLALIFKLLPLL 181 (253)
T ss_dssp SCCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC-CCBCSEEEEESCHHHH
T ss_pred CCCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC-CCCcchHHHHHHHHHh
Confidence 3567899999999999864 24888999999999999999887 3 4578889887665 4589999999999999
Q ss_pred CChHHHHHHHHHHHHccccCcEEEEE
Q 017080 193 STESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 193 ~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.+.+ ....+ ++.+.|+++|.++-.
T Consensus 182 E~q~-~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 182 EREQ-AGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHS-TTHHH-HHHHHCBCSEEEEEE
T ss_pred hhhc-hhhHH-HHHHHhcCCCEEEEc
Confidence 7754 33444 888899998664443
No 217
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.10 E-value=2e-11 Score=114.59 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=72.0
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeC----CHHHHHHHHH-----cCCeEEEe-eCCCCCCCCCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDI----SPSLIKICVD-----RGHEVLVA-DAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~----s~~~~~~a~~-----~~~~~~~~-d~~~~~~~~~~fD~V~~~ 186 (377)
.+.++.+|||||||+|.++.. .. .+|+|+|+ ++.+++.... .++.++++ |+..++ .++||+|+|.
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd 155 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCD 155 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEEC
Confidence 356789999999999998642 22 58999999 5644322211 24778888 887765 5789999997
Q ss_pred cchh---hcCChHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 187 AVLH---HLSTESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 187 ~~l~---h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
.+++ +..+......+|.++.++|||||.+++..+...
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~ 195 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY 195 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence 7653 333321112589999999999999999776543
No 218
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.10 E-value=2.7e-10 Score=111.93 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=82.7
Q ss_pred hCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCC--CCCCceeEEEe
Q 017080 118 NSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLP--YRSDFGDAAIS 185 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~--~~~~~fD~V~~ 185 (377)
....++.+|||+|||+|..+. ..++..|+|+|+|+.+++.++++ ++.++.+|+..++ +++++||+|++
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred cCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 356788999999999999642 35568999999999999988876 4788899998875 55688999996
Q ss_pred ------ccchhhcCChH------H-------HHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 186 ------IAVLHHLSTES------R-------RKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 186 ------~~~l~h~~~~~------~-------~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
.+++++.++.. + ...+|+++.++|||||.+++++.+..
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 34555555411 0 14889999999999999999986543
No 219
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.09 E-value=6e-11 Score=107.21 Aligned_cols=102 Identities=20% Similarity=0.135 Sum_probs=77.6
Q ss_pred HHHHHhCCCCCCEEEEECCccCcccc----cCC-CceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCC-C-C--
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLG----LNP-DCFFVGCDISPSLIKICVDR--------GHEVLVADAVNL-P-Y-- 175 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~-- 175 (377)
+...+....++.+|||||||+|..+. ..+ +.+|+++|+|+.+++.|+++ +++++.+|+.+. + +
T Consensus 61 ~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~ 140 (237)
T 3c3y_A 61 LMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQ 140 (237)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 33443344567899999999998642 234 78999999999999999875 367888888653 2 2
Q ss_pred ---CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 176 ---RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 176 ---~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++++||+|++.... .+ ...+++++.++|||||++++.+.
T Consensus 141 ~~~~~~~fD~I~~d~~~---~~---~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 141 GQESEGSYDFGFVDADK---PN---YIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp STTCTTCEEEEEECSCG---GG---HHHHHHHHHHHEEEEEEEEEECT
T ss_pred ccCCCCCcCEEEECCch---HH---HHHHHHHHHHhcCCCeEEEEecC
Confidence 25789999986432 22 67899999999999999988653
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.08 E-value=8.9e-11 Score=110.65 Aligned_cols=100 Identities=17% Similarity=0.079 Sum_probs=76.3
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCCC-CCCCCCceeEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------------GHEVLVADAVN-LPYRSDFGDAA 183 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~-~~~~~~~fD~V 183 (377)
+++.+|||||||+|.++. ..+..+|+++|+++.+++.|+++ +++++.+|+.. ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 456899999999999753 24567999999999999998764 36788898876 33446889999
Q ss_pred Eeccchhh---cCChHH-HHHHHHHHHHccccCcEEEEEEc
Q 017080 184 ISIAVLHH---LSTESR-RKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 184 ~~~~~l~h---~~~~~~-~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++....++ -+.... ...+++++.++|||||++++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99765543 111000 26899999999999999999753
No 221
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.07 E-value=9.9e-11 Score=108.70 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=76.0
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCCC-CCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVNL-PYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~~-~~~~~~fD~V~ 184 (377)
+++.+|||||||+|.++. ..+..+|+++|+++.+++.|+++ +++++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 456899999999999754 24567999999999999999875 357888888763 22367899999
Q ss_pred eccchhhcCChHHH--HHHHHHHHHccccCcEEEEEEc
Q 017080 185 SIAVLHHLSTESRR--KKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~~--~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+....++.+... . ..+++++.++|||||.+++...
T Consensus 157 ~d~~~~~~~~~~-l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAET-LFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGG-GSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchh-hhHHHHHHHHHHhcCCCcEEEEECC
Confidence 965433222211 2 6899999999999999998754
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.06 E-value=1.9e-10 Score=107.90 Aligned_cols=101 Identities=19% Similarity=0.166 Sum_probs=74.3
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCC-CCCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVN-LPYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~-~~~~~~~fD~V~ 184 (377)
+++.+|||||||+|.++. ..+..+|+++|+++.+++.|+++ +++++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999753 24567999999999999998864 36788888866 334468899999
Q ss_pred eccchhhcCChH-HHHHHHHHHHHccccCcEEEEEEcC
Q 017080 185 SIAVLHHLSTES-RRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 185 ~~~~l~h~~~~~-~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+....+..+... ....+++++.++|||||++++....
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 965433222100 0257899999999999999997643
No 223
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.06 E-value=2.9e-10 Score=110.20 Aligned_cols=109 Identities=9% Similarity=0.077 Sum_probs=76.9
Q ss_pred HHHhCC-CCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----C--CeEEEeeCCCCC-CCCCceeEEE
Q 017080 115 TFLNSL-PSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----G--HEVLVADAVNLP-YRSDFGDAAI 184 (377)
Q Consensus 115 ~~l~~~-~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~--~~~~~~d~~~~~-~~~~~fD~V~ 184 (377)
.++..+ .+|.+|||+|||+|.++.. ..++.|+++|+|+.+++.++++ + .++.++|+.++. ...+.||+|+
T Consensus 206 ~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 206 RLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp HHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEE
T ss_pred HHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEE
Confidence 344443 4589999999999997632 3466799999999999999887 3 357788887642 2234499999
Q ss_pred eccchhhcCC------hHHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 185 SIAVLHHLST------ESRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 185 ~~~~l~h~~~------~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
+.-....-.. ......+++.+.++|||||.+++.+....
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 8643211000 01156899999999999999997765543
No 224
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.05 E-value=4.8e-10 Score=108.17 Aligned_cols=94 Identities=13% Similarity=-0.015 Sum_probs=75.9
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCC-CCC-CCCceeEEEecc
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVN-LPY-RSDFGDAAISIA 187 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~-~~~-~~~~fD~V~~~~ 187 (377)
.++.+|||+| |+|.++. ..+..+|+|+|+|+.+++.|+++ +++++.+|+.+ +|. .+++||+|++..
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3578999999 9999753 25567999999999999999886 47899999988 663 457899999987
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEE-EEEE
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLV-LITV 219 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l-~i~~ 219 (377)
.+++. . ...+++++.++|||||.+ ++..
T Consensus 250 p~~~~-~---~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 250 PETLE-A---IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CSSHH-H---HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCchH-H---HHHHHHHHHHHcccCCeEEEEEE
Confidence 66543 2 478999999999999954 4444
No 225
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.05 E-value=1.7e-10 Score=106.57 Aligned_cols=100 Identities=15% Similarity=0.086 Sum_probs=75.3
Q ss_pred CCCCEEEEECCccCccccc---C-CCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCC-CCCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLGL---N-PDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVN-LPYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~-~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~-~~~~~~~fD~V~ 184 (377)
+.+.+|||||||+|.++.. . +..+|+++|+++.+++.|+++ +++++.+|+.. ++..+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4568999999999997542 3 457999999999999999874 36788999876 333467899999
Q ss_pred eccchhhcCChH-HHHHHHHHHHHccccCcEEEEEEc
Q 017080 185 SIAVLHHLSTES-RRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~-~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+....++.+... ....+++++.++|||||++++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 965433221100 015799999999999999998753
No 226
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.04 E-value=1.2e-10 Score=110.04 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=75.0
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCCC-CCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVNL-PYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~~-~~~~~~fD~V~ 184 (377)
+++.+|||||||+|.++. ..+..+|+++|+|+.+++.|+++ +++++.+|+.+. +..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 456899999999999753 23568999999999999999875 367888887653 33367899999
Q ss_pred eccchhhcCChHHH--HHHHHHHHHccccCcEEEEEEcC
Q 017080 185 SIAVLHHLSTESRR--KKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 185 ~~~~l~h~~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+...- ++...... ..+++++.++|||||++++...+
T Consensus 195 ~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 86532 11110001 68999999999999999997543
No 227
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.04 E-value=4e-10 Score=104.66 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=72.6
Q ss_pred CCCEEEEECCccCccc----ccCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCce---eEEEec
Q 017080 122 SGSLVLDAGCGNGKYL----GLNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFG---DAAISI 186 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~----~~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~f---D~V~~~ 186 (377)
++.+|||+|||+|.++ .. ++.+|+|+|+|+.+++.|+++ +++++++|+.+. + .++| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~-~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-F-KEKFASIEMILSN 199 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-G-GGGTTTCCEEEEC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-c-ccccCCCCEEEEc
Confidence 5679999999999964 34 788999999999999999886 278999999873 2 2578 999997
Q ss_pred ------------cchhhcCCh-----HHHHHHHHHHH-HccccCcEEEEEE
Q 017080 187 ------------AVLHHLSTE-----SRRKKAIEELV-RVVKKGSLVLITV 219 (377)
Q Consensus 187 ------------~~l~h~~~~-----~~~~~~l~~~~-r~LkpgG~l~i~~ 219 (377)
.+. |-+.. .+...+++++. +.|+|||++++..
T Consensus 200 PPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 222 22210 00237899999 9999999999864
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.04 E-value=2.6e-10 Score=106.50 Aligned_cols=100 Identities=14% Similarity=0.118 Sum_probs=72.8
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCC-CCCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVN-LPYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~-~~~~~~~fD~V~ 184 (377)
+.+.+|||||||+|.++. ..+..+|+++|+|+.+++.|+++ +++++.+|+.. ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999753 23567999999999999998864 36788888766 344467899999
Q ss_pred eccchhhcCChHH--HHHHHHHHHHccccCcEEEEEEc
Q 017080 185 SIAVLHHLSTESR--RKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~--~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+...-+++..... ...+++++.++|||||++++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 8543221211000 26899999999999999999753
No 229
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.03 E-value=4.1e-10 Score=111.89 Aligned_cols=102 Identities=13% Similarity=0.164 Sum_probs=78.2
Q ss_pred CCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCC-CCCceeEEEec--
Q 017080 122 SGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPY-RSDFGDAAISI-- 186 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~-~~~~fD~V~~~-- 186 (377)
++.+|||+|||+|..+. . .+...|+++|+|+.+++.++++ ++.+.++|+..++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 88999999999998642 2 3457999999999999998876 46788889887653 46789999982
Q ss_pred ----cchhhcCCh-------------HHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 187 ----AVLHHLSTE-------------SRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 187 ----~~l~h~~~~-------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
+++.+.++. .....+|+++.++|||||+|++++.+..
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 344433321 0124789999999999999999886543
No 230
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.03 E-value=1.9e-10 Score=108.30 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=71.3
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCC-CCCCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVN-LPYRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~-~~~~~~~fD~V~ 184 (377)
+++.+|||||||+|.++. ..+..+|+++|+|+.+++.|+++ +++++.+|+.. ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 456799999999999653 24568999999999999999875 25678888765 233467899999
Q ss_pred eccchhhcCChHHH--HHHHHHHHHccccCcEEEEEE
Q 017080 185 SIAVLHHLSTESRR--KKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~--~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+... .++...... ..+++++.++|+|||++++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8654 333221111 689999999999999999875
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.03 E-value=6.8e-11 Score=109.89 Aligned_cols=94 Identities=24% Similarity=0.309 Sum_probs=67.9
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++.+|+.+++++ +||+|+++..
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlp 102 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLP 102 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECC
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecC
Confidence 356788999999999998643 2356999999999999998875 468899999887654 7999999644
Q ss_pred hhhcCChHHHHHHH--------------HHH--HHccccCcEEE
Q 017080 189 LHHLSTESRRKKAI--------------EEL--VRVVKKGSLVL 216 (377)
Q Consensus 189 l~h~~~~~~~~~~l--------------~~~--~r~LkpgG~l~ 216 (377)
.+...+ . ...++ +|+ +++|+|||.++
T Consensus 103 y~~~~~-~-~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 103 YQISSP-F-VFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp GGGHHH-H-HHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cccchH-H-HHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 332221 0 11222 233 36899999863
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.02 E-value=2.4e-10 Score=104.85 Aligned_cols=88 Identities=8% Similarity=-0.104 Sum_probs=71.5
Q ss_pred CCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc-----------CCeEEEeeCCCCCCCCCceeEEEec
Q 017080 121 PSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR-----------GHEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
+.+.+|||||||+|.++. ..+ .+|+++|+++.+++.|+++ +++++.+|+..+. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 456799999999998653 235 8999999999999988754 3677888887754 789999986
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
..+ +..+++++.++|||||++++...
T Consensus 147 -----~~d---p~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 147 -----QEP---DIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -----SCC---CHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CCC---hHHHHHHHHHhcCCCcEEEEEcC
Confidence 345 45699999999999999998743
No 233
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.02 E-value=2.1e-09 Score=94.38 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=72.5
Q ss_pred CCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEEeccchh
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~ 190 (377)
..++.+|||+|||+|.++.. ....+|+|+|+|+.+++.++++ +++++.+|+.+++ ++||+|++.-.++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 34678999999999997532 3334899999999999999987 4788999998864 4899999998887
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+..... ...+++++.+++ || +++..
T Consensus 124 ~~~~~~-~~~~l~~~~~~l--~~-~~~~~ 148 (207)
T 1wy7_A 124 SQRKHA-DRPFLLKAFEIS--DV-VYSIH 148 (207)
T ss_dssp SSSTTT-THHHHHHHHHHC--SE-EEEEE
T ss_pred cccCCc-hHHHHHHHHHhc--Cc-EEEEE
Confidence 765322 467899999998 54 44443
No 234
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.01 E-value=3.2e-10 Score=111.79 Aligned_cols=107 Identities=12% Similarity=0.147 Sum_probs=79.7
Q ss_pred HhCCCCCCEEEEECCccCcccc----cC-CCceEEEEeCCHHHHHHHHHc----C--CeEEEeeCCCCC-CCCCceeEEE
Q 017080 117 LNSLPSGSLVLDAGCGNGKYLG----LN-PDCFFVGCDISPSLIKICVDR----G--HEVLVADAVNLP-YRSDFGDAAI 184 (377)
Q Consensus 117 l~~~~~~~~vLDiGcG~G~~~~----~~-~~~~v~gvD~s~~~~~~a~~~----~--~~~~~~d~~~~~-~~~~~fD~V~ 184 (377)
+....++.+|||+|||+|..+. .. ....|+++|+|+.+++.++++ + +.+..+|+..++ ..+++||+|+
T Consensus 96 ~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 96 LLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEE
T ss_pred hcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEE
Confidence 3456788999999999998542 23 447999999999999999886 3 667778877765 3468899999
Q ss_pred e------ccchhhcCCh-------------HHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 185 S------IAVLHHLSTE-------------SRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 185 ~------~~~l~h~~~~-------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
+ .+++.+-++. .....+|+++.++|||||+|++++-+..
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 5 2334333331 0026899999999999999999876544
No 235
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.01 E-value=1.7e-10 Score=111.76 Aligned_cols=106 Identities=15% Similarity=0.110 Sum_probs=80.6
Q ss_pred HHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCC----CCCc
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPY----RSDF 179 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~----~~~~ 179 (377)
....+..+ ++.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ +++++++|+.++.. .+++
T Consensus 201 ~~~~~~~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~ 279 (382)
T 1wxx_A 201 NRLYMERF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGER 279 (382)
T ss_dssp HHHHGGGC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred HHHHHHhc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCC
Confidence 34455566 788999999999997532 1256999999999999999886 37899999877431 2578
Q ss_pred eeEEEeccc---------hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 180 GDAAISIAV---------LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 180 fD~V~~~~~---------l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
||+|++.-. ..+..+ ...++.++.++|+|||.+++++...
T Consensus 280 fD~Ii~dpP~~~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 280 FDLVVLDPPAFAKGKKDVERAYRA---YKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEEEEECCCCSCCSTTSHHHHHHH---HHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred eeEEEECCCCCCCChhHHHHHHHH---HHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999998432 122222 6789999999999999999987653
No 236
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.00 E-value=2.1e-10 Score=106.35 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=72.6
Q ss_pred CCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc-----------------CCeEEEeeCCCC-CCCCCc
Q 017080 121 PSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR-----------------GHEVLVADAVNL-PYRSDF 179 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~-----------------~~~~~~~d~~~~-~~~~~~ 179 (377)
+++.+|||||||+|.++. ..+..+|+++|+++.+++.|+++ +++++.+|+.+. +. +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 456899999999998653 23567999999999999998864 256778887552 22 678
Q ss_pred eeEEEeccchhhcCChHH-HHHHHHHHHHccccCcEEEEEEc
Q 017080 180 GDAAISIAVLHHLSTESR-RKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 180 fD~V~~~~~l~h~~~~~~-~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
||+|++....+.-+.... ...+++++.++|+|||++++...
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999998655322111100 16789999999999999998753
No 237
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.99 E-value=3e-10 Score=110.42 Aligned_cols=98 Identities=17% Similarity=0.113 Sum_probs=76.4
Q ss_pred CCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCC----CCCceeEEEec
Q 017080 122 SGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPY----RSDFGDAAISI 186 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~----~~~~fD~V~~~ 186 (377)
++.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ +++++.+|+.++.. ..++||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 788999999999997532 3334999999999999999876 46789999876421 25789999994
Q ss_pred cc---------hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 187 AV---------LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 187 ~~---------l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
-. .++..+ ...++.++.++|+|||.+++++.+.
T Consensus 297 pP~~~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRA---YFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHH---HHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHH---HHHHHHHHHHhcCCCcEEEEEECCC
Confidence 32 222233 6789999999999999999887654
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.98 E-value=3.8e-10 Score=117.26 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=81.0
Q ss_pred HHHHHHHhCCCCCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc---------CCeEEEeeCCC-CCCCC
Q 017080 111 PKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR---------GHEVLVADAVN-LPYRS 177 (377)
Q Consensus 111 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~~d~~~-~~~~~ 177 (377)
+....++..+.+|.+|||+|||+|.++-. ..++ +|+++|+|+.+++.++++ +++++++|+.+ ++...
T Consensus 528 r~~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~ 607 (703)
T 3v97_A 528 RIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN 607 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCC
T ss_pred HHHHHHHHHhcCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcC
Confidence 33334444445789999999999997532 2344 699999999999999986 26789999887 34446
Q ss_pred CceeEEEecc-----------chhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 178 DFGDAAISIA-----------VLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 178 ~~fD~V~~~~-----------~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++||+|++.- ++.+..+ ...++.++.++|+|||.+++++-
T Consensus 608 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~---~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKRMEDAFDVQRD---HLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CCEEEEEECCCSBC-------CCBHHHH---HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCccEEEECCccccCCccchhHHHHHHH---HHHHHHHHHHhcCCCcEEEEEEC
Confidence 7899999854 2333333 77899999999999999998764
No 239
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.98 E-value=2.7e-10 Score=110.35 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=75.2
Q ss_pred CCCCEEEEECCccCccccc--CCCc-eEEEEeCCHHHHHHHHHc---------CCeEEEeeCCCC-C-C--CCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLGL--NPDC-FFVGCDISPSLIKICVDR---------GHEVLVADAVNL-P-Y--RSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~--~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~~d~~~~-~-~--~~~~fD~V~ 184 (377)
.++.+|||+|||+|.++.. ..++ +|+|+|+|+.+++.|+++ +++++++|+.+. + . ..++||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 6788999999999997532 2244 899999999999999876 357899998763 2 1 245899999
Q ss_pred eccch-----hhcCCh-HHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 185 SIAVL-----HHLSTE-SRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 185 ~~~~l-----~h~~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+.-.. .++.+. .....+++++.++|+|||.++++....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 84322 233331 115568888999999999999987543
No 240
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.97 E-value=9.4e-10 Score=101.44 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=76.3
Q ss_pred hCCCCCCEEEEECCccCcccc---cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEec
Q 017080 118 NSLPSGSLVLDAGCGNGKYLG---LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
..+.+|.+|||+|||+|.++- ....++|+++|+||.+++.++++ .+.++.+|+.+++ +.+.||.|++.
T Consensus 121 ~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~ 199 (278)
T 3k6r_A 121 KVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMG 199 (278)
T ss_dssp HHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEEC
T ss_pred HhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEEC
Confidence 346789999999999999863 24446999999999999999887 3678899998875 36789999976
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.. +. ...+|..+.++|||||++.+....
T Consensus 200 ~p----~~---~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 200 YV----VR---THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CC----SS---GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CC----Cc---HHHHHHHHHHHcCCCCEEEEEeee
Confidence 32 22 346788888999999998877654
No 241
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.97 E-value=1.2e-09 Score=105.25 Aligned_cols=98 Identities=21% Similarity=0.109 Sum_probs=74.5
Q ss_pred CCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEecc
Q 017080 120 LPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 187 (377)
..++.+|||+|||+|.++. ..+..+|+|+|+|+.|++.|+++ ++++.++|+.++++++++||+|+++-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 5678899999999999753 24445999999999999999986 47899999999988889999999975
Q ss_pred chhhcC----Ch-HHHHHHHHHHHHccccCcEEEEEE
Q 017080 188 VLHHLS----TE-SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 188 ~l~h~~----~~-~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.++.-. .. +....+++++.++| ||.+++..
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 543211 11 11367889999988 55555554
No 242
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.96 E-value=1.3e-09 Score=103.84 Aligned_cols=101 Identities=22% Similarity=0.221 Sum_probs=79.9
Q ss_pred CCCCCEEEEECCccCccccc----CC-----CceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCCCCCCceeEEE
Q 017080 120 LPSGSLVLDAGCGNGKYLGL----NP-----DCFFVGCDISPSLIKICVDR------GHEVLVADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~----~~-----~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~V~ 184 (377)
..++.+|||+|||+|.++.. .+ ...++|+|+++.+++.|+.+ ++.+..+|.... .+.++||+|+
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii 206 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVI 206 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEE
Confidence 34567999999999997531 22 27899999999999999886 478889998763 3467899999
Q ss_pred eccchhhcCChHHH---------------HHHHHHHHHccccCcEEEEEEcC
Q 017080 185 SIAVLHHLSTESRR---------------KKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 185 ~~~~l~h~~~~~~~---------------~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++-.+++++..+.. ..+++++.+.|||||++++..+.
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 99888777653311 26899999999999999998754
No 243
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.96 E-value=6e-10 Score=108.34 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=75.9
Q ss_pred CCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc----C-----CeEEEeeCCCCCC----CCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR----G-----HEVLVADAVNLPY----RSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~----~-----~~~~~~d~~~~~~----~~~~fD~V~ 184 (377)
.++.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ + ++++.+|+.++.. ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 5788999999999997532 2245999999999999998875 3 4688899876421 146899999
Q ss_pred eccc---------hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 185 SIAV---------LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 185 ~~~~---------l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+.-. ..+... ...++.++.+.|+|||++++++...
T Consensus 299 ~dpP~~~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRG---YKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTH---HHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHH---HHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9632 222233 7789999999999999999987543
No 244
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.92 E-value=9.2e-10 Score=108.38 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=78.7
Q ss_pred HHhCCCCCCEEEEECCccCccc----cc-CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC-CCCCceeE
Q 017080 116 FLNSLPSGSLVLDAGCGNGKYL----GL-NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP-YRSDFGDA 182 (377)
Q Consensus 116 ~l~~~~~~~~vLDiGcG~G~~~----~~-~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~-~~~~~fD~ 182 (377)
.+....++.+|||+|||+|..+ .. .....|+++|+|+.+++.++++ ++.+..+|+..++ ..+++||+
T Consensus 99 ~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~ 178 (456)
T 3m4x_A 99 TAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDR 178 (456)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEE
T ss_pred HHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCE
Confidence 3345678899999999999853 22 3457999999999999998876 4667778887754 34688999
Q ss_pred EEecc------chhhcCCh-------------HHHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 183 AISIA------VLHHLSTE-------------SRRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 183 V~~~~------~l~h~~~~-------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
|++.. ++.+-++. .....+|.++.++|||||.|+.++-+..
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 99843 22221110 0023789999999999999999876654
No 245
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.91 E-value=2.4e-09 Score=101.75 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=76.1
Q ss_pred hCCCCCCEEEEECCccCcccc-cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccc
Q 017080 118 NSLPSGSLVLDAGCGNGKYLG-LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~-~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 188 (377)
..+.++.+|||+|||+|.++. .....+|+|+|+|+.+++.++++ +++++.+|+.++. ++||+|++.-.
T Consensus 191 ~~~~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 191 KKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp HHCCTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred HhcCCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc
Confidence 345678999999999999742 23456999999999999999886 3788999998865 88999998532
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
-. ...++..+.++|+|||.+++..+..
T Consensus 268 ~~-------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 268 KF-------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp TT-------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred Hh-------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 11 2378999999999999999987654
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.84 E-value=7.2e-09 Score=96.82 Aligned_cols=70 Identities=23% Similarity=0.291 Sum_probs=53.2
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++.+|+..+++ ++||+|+++...
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n~py 116 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTANIPY 116 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEECCG
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEcCCc
Confidence 456788999999999998643 3467999999999999998875 47889999988765 489999997554
Q ss_pred h
Q 017080 190 H 190 (377)
Q Consensus 190 ~ 190 (377)
+
T Consensus 117 ~ 117 (299)
T 2h1r_A 117 K 117 (299)
T ss_dssp G
T ss_pred c
Confidence 4
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.83 E-value=2.4e-11 Score=110.39 Aligned_cols=98 Identities=9% Similarity=0.135 Sum_probs=72.4
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCC-CceeEEEecc---
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRS-DFGDAAISIA--- 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~-~~fD~V~~~~--- 187 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++.+|+.++++++ ++| .|+++-
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYH 104 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSS
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCcc
Confidence 356788999999999998643 2347999999999999888765 4788999999988764 688 566642
Q ss_pred --------chhhcCChHHHHHHH----HHHHHccccCcEEEEEEc
Q 017080 188 --------VLHHLSTESRRKKAI----EELVRVVKKGSLVLITVW 220 (377)
Q Consensus 188 --------~l~h~~~~~~~~~~l----~~~~r~LkpgG~l~i~~~ 220 (377)
++.|... ...++ +.+.|+|+|||.+.+...
T Consensus 105 ~~~~~~~~~~~~~~~---~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 105 LSTQIIKKVVFESRA---SDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp SCHHHHHHHHHHCCC---EEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred ccHHHHHHHHhCCCC---CeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 2333333 33455 778999999998777543
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.81 E-value=1.3e-09 Score=98.77 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=52.4
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCC-CceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRS-DFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~-~~fD~V~~~ 186 (377)
+.++.+|||||||+|.++.. ..+.+|+|+|+|+.+++.++++ +++++.+|+.++++++ ..| .|+++
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEE
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEe
Confidence 45678999999999997643 2347999999999999999886 5789999999988764 455 34443
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.78 E-value=1.3e-08 Score=99.61 Aligned_cols=92 Identities=21% Similarity=0.182 Sum_probs=69.8
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----C--CeEEEeeCCCCCCCCCceeEEEeccchhh
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----G--HEVLVADAVNLPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~--~~~~~~d~~~~~~~~~~fD~V~~~~~l~h 191 (377)
+.++.+|||+|||+|.++.. ..+.+|+|+|+|+.+++.|+++ + ++|+.+|+.++.. .+||+|++.-.-..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAG 365 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTC
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccc
Confidence 46788999999999997532 2356999999999999999876 3 6899999988642 28999999543221
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+ ...+++.+. .|+|||.++++.
T Consensus 366 ~-----~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 L-----HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp S-----CHHHHHHHH-HHCCSEEEEEES
T ss_pred h-----HHHHHHHHH-hcCCCcEEEEEC
Confidence 1 124555554 599999999875
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.73 E-value=1.2e-08 Score=99.68 Aligned_cols=99 Identities=23% Similarity=0.334 Sum_probs=74.5
Q ss_pred CCCCEEEEECCccCccccc-----CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhh----
Q 017080 121 PSGSLVLDAGCGNGKYLGL-----NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHH---- 191 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~-----~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h---- 191 (377)
.++.+|||+|||+|.++.. .+..+++|+|+++.+++.| .+++++++|+..++ +.++||+|+++-....
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccc
Confidence 3467999999999997632 2678999999999999877 45889999998864 3578999999522211
Q ss_pred ------cCChH----------------HHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 192 ------LSTES----------------RRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 192 ------~~~~~----------------~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
+.++. ....+++.+.++|+|||.+.+..+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 22211 02267999999999999999988653
No 251
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.69 E-value=3.6e-08 Score=94.51 Aligned_cols=151 Identities=17% Similarity=0.120 Sum_probs=92.8
Q ss_pred CCEEEEECCccCcccc------------c-------CCCceEEEEeCCHHHHHHHHHc-------------------CCe
Q 017080 123 GSLVLDAGCGNGKYLG------------L-------NPDCFFVGCDISPSLIKICVDR-------------------GHE 164 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~------------~-------~~~~~v~gvD~s~~~~~~a~~~-------------------~~~ 164 (377)
+.+|+|+|||+|..+. . .|..+|...|+..+.....-+. +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5799999999998421 1 2678999999877654222111 112
Q ss_pred EEEeeCC---CCCCCCCceeEEEeccchhhcCChH-----------------------------------HHHHHHHHHH
Q 017080 165 VLVADAV---NLPYRSDFGDAAISIAVLHHLSTES-----------------------------------RRKKAIEELV 206 (377)
Q Consensus 165 ~~~~d~~---~~~~~~~~fD~V~~~~~l~h~~~~~-----------------------------------~~~~~l~~~~ 206 (377)
|..+... .-.+|+++||+|+++.+|||+.+.. ++..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332 3358899999999999999997321 3666899999
Q ss_pred HccccCcEEEEEEcCCCccc----hhhhhcc-ccchHHHHhhhhCCC-------CCCcCCCCCCCcccHHhHhh-cCCCc
Q 017080 207 RVVKKGSLVLITVWAVEQED----KSLVTKW-TPLTQKYVEEWIGPG-------SPRVRSPSARTLESIPETED-NGSEE 273 (377)
Q Consensus 207 r~LkpgG~l~i~~~~~~~~~----~~~~~~~-~~~~~~~~~~w~~~~-------~~~~~~~~~~~~~~l~~~l~-~aGF~ 273 (377)
+.|+|||.+++......... ......| ..+... +....... .....+..+.+.+++++.++ +.||.
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~a-l~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDA-WDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHH-HHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHH-HHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcE
Confidence 99999999999987654321 0000111 111111 11111100 00122344577899999998 59997
Q ss_pred c
Q 017080 274 Q 274 (377)
Q Consensus 274 ~ 274 (377)
+
T Consensus 292 I 292 (374)
T 3b5i_A 292 I 292 (374)
T ss_dssp E
T ss_pred E
Confidence 7
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.68 E-value=5.4e-08 Score=95.59 Aligned_cols=93 Identities=14% Similarity=0.214 Sum_probs=69.2
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCC----CCCCCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVN----LPYRSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~----~~~~~~~fD~V~~~ 186 (377)
+.++.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ ++.|+.+|+.+ +++++++||+|++.
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 45678999999999997632 3367999999999999999876 47899999987 33556789999985
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
-.-.- ...+++.+.+ ++|++.++++.
T Consensus 364 PPr~g------~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 364 PARAG------AAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CCTTC------CHHHHHHHHH-HCCSEEEEEES
T ss_pred CCCcc------HHHHHHHHHh-cCCCeEEEEEC
Confidence 32211 1234554443 78999888874
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.66 E-value=2.4e-08 Score=92.93 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=60.4
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCCCceeEEEeccchh
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~ 190 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+++.+++.++++ +++++.+|+..+++++.+||.|+++...+
T Consensus 47 ~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 47 NLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEECCGG
T ss_pred CCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEeCccc
Confidence 456788999999999998643 2367999999999999998875 68999999999888888899999875543
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.66 E-value=1.9e-08 Score=95.40 Aligned_cols=100 Identities=18% Similarity=0.124 Sum_probs=71.0
Q ss_pred CCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc---------------CCeEEEeeCCCCCC----CCC
Q 017080 121 PSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR---------------GHEVLVADAVNLPY----RSD 178 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~---------------~~~~~~~d~~~~~~----~~~ 178 (377)
+.+.+||+||||+|.++.. .+..+|++||+++.+++.|+++ +++++.+|+..+.- ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3568999999999997642 3447999999999999999976 25677888776421 357
Q ss_pred ceeEEEeccch-hh--cCChHHHHHHHHHH----HHccccCcEEEEEEc
Q 017080 179 FGDAAISIAVL-HH--LSTESRRKKAIEEL----VRVVKKGSLVLITVW 220 (377)
Q Consensus 179 ~fD~V~~~~~l-~h--~~~~~~~~~~l~~~----~r~LkpgG~l~i~~~ 220 (377)
+||+|++...- .. .+..-.-..+++.+ .++|+|||++++..-
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 89999986432 11 11000024566665 999999999988753
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.64 E-value=2.7e-08 Score=98.14 Aligned_cols=101 Identities=17% Similarity=0.266 Sum_probs=77.3
Q ss_pred CCCCCEEEEECCccCccccc---C--------------CCceEEEEeCCHHHHHHHHHc---------CCeEEEeeCCCC
Q 017080 120 LPSGSLVLDAGCGNGKYLGL---N--------------PDCFFVGCDISPSLIKICVDR---------GHEVLVADAVNL 173 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~---~--------------~~~~v~gvD~s~~~~~~a~~~---------~~~~~~~d~~~~ 173 (377)
..++.+|||.|||+|.++.. . +...++|+|+++.+++.|+.+ +..+.++|....
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 45677999999999997521 1 346899999999999999875 346889998876
Q ss_pred CCCCCceeEEEeccchhhcCChH--------------HHHHHHHHHHHccccCcEEEEEEcC
Q 017080 174 PYRSDFGDAAISIAVLHHLSTES--------------RRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 174 ~~~~~~fD~V~~~~~l~h~~~~~--------------~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+. .++||+|+++-.+.+..... ....+++++.++|||||++.+..+.
T Consensus 249 ~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 249 EP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 54 34899999987665533210 0247899999999999999988754
No 256
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.64 E-value=1.6e-07 Score=88.05 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=73.3
Q ss_pred HhCCCCCCEEEEECCccCcccc----c-CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCCC---Ccee
Q 017080 117 LNSLPSGSLVLDAGCGNGKYLG----L-NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYRS---DFGD 181 (377)
Q Consensus 117 l~~~~~~~~vLDiGcG~G~~~~----~-~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~---~~fD 181 (377)
+..+.+|.+|||+|||+|..+. . .+...|+++|+++.+++.++++ ++.++.+|+..++... ++||
T Consensus 97 ~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 97 LLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred HhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCC
Confidence 3456788999999999998542 2 4567999999999999998876 4688899988765322 5799
Q ss_pred EEEec------cchhhcCCh-----------H----HHHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 182 AAISI------AVLHHLSTE-----------S----RRKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 182 ~V~~~------~~l~h~~~~-----------~----~~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
.|++. +++..-++. . ...++|..+.++|+ ||+++.++-+..
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 99972 233221110 0 01356788888887 999888875543
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.61 E-value=9.8e-08 Score=92.23 Aligned_cols=102 Identities=23% Similarity=0.221 Sum_probs=77.3
Q ss_pred CCCCCCEEEEECCccCccccc--------CCC----------------------------------ceEEEEeCCHHHHH
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--------NPD----------------------------------CFFVGCDISPSLIK 156 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--------~~~----------------------------------~~v~gvD~s~~~~~ 156 (377)
...++.+|||++||+|.++.. .|+ ..|+|+|+++.+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 446778999999999986421 222 57999999999999
Q ss_pred HHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccchh-hcCChHHHHHHHHHHHHcccc--CcEEEEEEcC
Q 017080 157 ICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAVLH-HLSTESRRKKAIEELVRVVKK--GSLVLITVWA 221 (377)
Q Consensus 157 ~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~-h~~~~~~~~~~l~~~~r~Lkp--gG~l~i~~~~ 221 (377)
.|+.+ .+++.++|+.+++. .++||+|+++-... .+.+.+....+.+++.++||+ ||.+++.+..
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHHHcCCCCceEEEECChhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 99987 36899999999865 45899999975543 233223367788888888876 8888888754
No 258
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.60 E-value=1.6e-07 Score=90.52 Aligned_cols=103 Identities=13% Similarity=0.133 Sum_probs=79.0
Q ss_pred hCCCCCCEEEEECCccCcccc--------cCCC----------------------------------ceEEEEeCCHHHH
Q 017080 118 NSLPSGSLVLDAGCGNGKYLG--------LNPD----------------------------------CFFVGCDISPSLI 155 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~--------~~~~----------------------------------~~v~gvD~s~~~~ 155 (377)
....++..|||.+||+|.++. ..|| ..|+|+|+|+.|+
T Consensus 190 ~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al 269 (384)
T 3ldg_A 190 SNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMV 269 (384)
T ss_dssp TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHH
Confidence 345678899999999999641 1222 4699999999999
Q ss_pred HHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccchh-hcCChHHHHHHHHHHHHcccc--CcEEEEEEcC
Q 017080 156 KICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAVLH-HLSTESRRKKAIEELVRVVKK--GSLVLITVWA 221 (377)
Q Consensus 156 ~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~-h~~~~~~~~~~l~~~~r~Lkp--gG~l~i~~~~ 221 (377)
+.|+++ .+++.++|+.+++.+ ++||+|+++-..+ -+.+.+....+++++.+.||+ ||.+++.+..
T Consensus 270 ~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 270 EIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 999987 268999999998754 5899999984432 244444477888888888876 9999888764
No 259
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.60 E-value=9.8e-08 Score=92.45 Aligned_cols=103 Identities=18% Similarity=0.177 Sum_probs=76.4
Q ss_pred hCCCCCCEEEEECCccCcccc--------cCCC----------------------------------ceEEEEeCCHHHH
Q 017080 118 NSLPSGSLVLDAGCGNGKYLG--------LNPD----------------------------------CFFVGCDISPSLI 155 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~~~~--------~~~~----------------------------------~~v~gvD~s~~~~ 155 (377)
....++..|||.+||+|.++. ..|| ..|+|+|+|+.|+
T Consensus 197 ~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al 276 (393)
T 3k0b_A 197 TSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLI 276 (393)
T ss_dssp SCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHH
Confidence 345678899999999999741 1222 4699999999999
Q ss_pred HHHHHc--------CCeEEEeeCCCCCCCCCceeEEEeccchh-hcCChHHHHHHHHHHHHcccc--CcEEEEEEcC
Q 017080 156 KICVDR--------GHEVLVADAVNLPYRSDFGDAAISIAVLH-HLSTESRRKKAIEELVRVVKK--GSLVLITVWA 221 (377)
Q Consensus 156 ~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~l~-h~~~~~~~~~~l~~~~r~Lkp--gG~l~i~~~~ 221 (377)
+.|+.+ .+++.++|+.+++.+ ++||+|+++-... .+.+.+....+.+++.+.||+ ||.+++.+..
T Consensus 277 ~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 277 EIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 999987 378999999998754 5899999984332 122222356677777777776 9998888754
No 260
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.58 E-value=2e-08 Score=91.14 Aligned_cols=104 Identities=12% Similarity=0.072 Sum_probs=70.5
Q ss_pred CCCCCCEEEEECCccCccccc---C-CCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---N-PDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~-~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.+.++.+|||+|||+|.|+.. . +...++|+|++-.+....... ++..+..+++...+++++||+|+|..+.
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCcc
Confidence 467888999999999999763 2 334788888874431111110 3445566665556778899999998755
Q ss_pred h---hcCChHHHHHHHHHHHHccccC-cEEEEEEcCC
Q 017080 190 H---HLSTESRRKKAIEELVRVVKKG-SLVLITVWAV 222 (377)
Q Consensus 190 ~---h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~~~ 222 (377)
+ +..|..+-..+|+.+.++|+|| |.+++-.+.+
T Consensus 151 nsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 151 SSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 4 1122211224578889999999 9999988874
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.57 E-value=1.3e-07 Score=86.13 Aligned_cols=68 Identities=12% Similarity=0.141 Sum_probs=54.9
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCC----CceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRS----DFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~----~~fD~V~~~~ 187 (377)
.+.++.+|||||||+|.++.. ..+.+|+|+|+++.|++.++++ +++++++|+.++++++ ++|| |+++-
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEEEC
T ss_pred CCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEecC
Confidence 456788999999999998643 3457999999999999999876 5889999999987643 5688 55543
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.51 E-value=9.9e-07 Score=83.91 Aligned_cols=153 Identities=12% Similarity=0.017 Sum_probs=98.2
Q ss_pred CCCCEEEEECCccCcccc--------------------cCCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCC
Q 017080 121 PSGSLVLDAGCGNGKYLG--------------------LNPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVN 172 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~--------------------~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~ 172 (377)
+...+|+|+||++|..+- ..|..+|+..|+..+.....-+. +..|+.+....
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 334689999999998431 13567999999988877666544 22455554444
Q ss_pred ---CCCCCCceeEEEeccchhhcCCh------------------------------HHHHHHHHHHHHccccCcEEEEEE
Q 017080 173 ---LPYRSDFGDAAISIAVLHHLSTE------------------------------SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 173 ---~~~~~~~fD~V~~~~~l~h~~~~------------------------------~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
-.+|++++|+|+++.+|||+.+. .++..+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 46889999999999999998651 134566999999999999999998
Q ss_pred cCCCccchhhhhccccchHHHHhhhh---CC-C------CCCcCCCCCCCcccHHhHhhcCCC-cc
Q 017080 220 WAVEQEDKSLVTKWTPLTQKYVEEWI---GP-G------SPRVRSPSARTLESIPETEDNGSE-EQ 274 (377)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~w~---~~-~------~~~~~~~~~~~~~~l~~~l~~aGF-~~ 274 (377)
......... ......+.......|. .. . .....+..+.+.+++++.+++.|. .+
T Consensus 210 ~gr~~~~~~-~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i 274 (359)
T 1m6e_X 210 LGRRSEDRA-STECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLI 274 (359)
T ss_dssp EECSSSSSS-STTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCC
T ss_pred ecCCCCCcc-ccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceE
Confidence 765433110 0000001111111121 10 0 012234557788999999999855 55
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.49 E-value=1.5e-07 Score=86.39 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=58.3
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc----CCeEEEeeCCCCCCCCC-ceeEEEeccchhh
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR----GHEVLVADAVNLPYRSD-FGDAAISIAVLHH 191 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~-~fD~V~~~~~l~h 191 (377)
.+.++ +|||||||+|.++.. ..+.+|+|+|+++.|++.++++ +++++.+|+..+++++. .+|.|+++-.. +
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy-~ 121 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANLPY-H 121 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEECS-S
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEecCcc-c
Confidence 45677 999999999998643 3457999999999999999886 58899999999887643 68888876543 3
Q ss_pred cCC
Q 017080 192 LST 194 (377)
Q Consensus 192 ~~~ 194 (377)
+..
T Consensus 122 iss 124 (271)
T 3fut_A 122 IAT 124 (271)
T ss_dssp CCH
T ss_pred ccH
Confidence 443
No 264
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.45 E-value=4.2e-07 Score=87.17 Aligned_cols=150 Identities=19% Similarity=0.088 Sum_probs=93.2
Q ss_pred CCEEEEECCccCccc------------cc---------CCCceEEEEeCC-----------HHHHHHHHHc-----CCeE
Q 017080 123 GSLVLDAGCGNGKYL------------GL---------NPDCFFVGCDIS-----------PSLIKICVDR-----GHEV 165 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~------------~~---------~~~~~v~gvD~s-----------~~~~~~a~~~-----~~~~ 165 (377)
..+|+|+||++|..+ .. .|..+|+..|+. +.+.+..++. +..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 579999999999742 11 256799999998 5555544332 2356
Q ss_pred EEeeCCC---CCCCCCceeEEEeccchhhcCChH------------------------------------HHHHHHHHHH
Q 017080 166 LVADAVN---LPYRSDFGDAAISIAVLHHLSTES------------------------------------RRKKAIEELV 206 (377)
Q Consensus 166 ~~~d~~~---~~~~~~~fD~V~~~~~l~h~~~~~------------------------------------~~~~~l~~~~ 206 (377)
+.+.... -.||++++|+|+++.+|||+.+.. ++..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665544 358899999999999999987631 1122367779
Q ss_pred HccccCcEEEEEEcCCCcc--c-h---hhhhccccchHH-HHhhhhCCCCCCcCCCCCCCcccHHhHhhcC-CCcc
Q 017080 207 RVVKKGSLVLITVWAVEQE--D-K---SLVTKWTPLTQK-YVEEWIGPGSPRVRSPSARTLESIPETEDNG-SEEQ 274 (377)
Q Consensus 207 r~LkpgG~l~i~~~~~~~~--~-~---~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~a-GF~~ 274 (377)
+.|+|||++++........ . . .+...|...... ....- .......+..+.+.+++++.++++ ||.+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~e--k~dsf~~P~y~ps~~E~~~~le~~g~F~i 286 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEE--KLDSFNVPIYAPSTEEVKRIVEEEGSFEI 286 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHH--HHHTCCCSBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchh--hhcccCCcccCCCHHHHHHHHHHcCCceE
Confidence 9999999999998775443 1 0 111112111000 00000 000122234567889999999997 5766
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.40 E-value=5.6e-07 Score=81.64 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=59.0
Q ss_pred CCCCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc---CCeEEEeeCCCCCCCCCceeEEEeccchhhc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR---GHEVLVADAVNLPYRSDFGDAAISIAVLHHL 192 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~---~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~ 192 (377)
.+.++.+|||||||+|.++.. .+..+|+|+|+++.+++.++++ +++++.+|+..+++++..-+.++..+.-.++
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEECCTTT
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEEEEECchhc
Confidence 345788999999999997642 3347999999999999999876 5789999999988664221333333333344
Q ss_pred CChHHHHHHHHHHHHc
Q 017080 193 STESRRKKAIEELVRV 208 (377)
Q Consensus 193 ~~~~~~~~~l~~~~r~ 208 (377)
.. .++.++.+.
T Consensus 108 ~~-----~il~~ll~~ 118 (249)
T 3ftd_A 108 AS-----LIIENTVYN 118 (249)
T ss_dssp HH-----HHHHHHHHT
T ss_pred cH-----HHHHHHHhc
Confidence 32 445555443
No 266
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.38 E-value=1.8e-07 Score=85.33 Aligned_cols=73 Identities=14% Similarity=0.079 Sum_probs=55.8
Q ss_pred CCCCCCEEEEECCccCccccc--CCCceEEEEeCCH-------HHHHHHHHc-------C-CeEEEeeCCCC-C-CCC--
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISP-------SLIKICVDR-------G-HEVLVADAVNL-P-YRS-- 177 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~-------~~~~~a~~~-------~-~~~~~~d~~~~-~-~~~-- 177 (377)
.+.++.+|||+|||+|.++.. ..+++|+|+|+|+ .+++.|+++ + ++++.+|+.++ + +++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 345678999999999997532 2467999999999 999888764 3 88999999874 3 444
Q ss_pred CceeEEEeccchhh
Q 017080 178 DFGDAAISIAVLHH 191 (377)
Q Consensus 178 ~~fD~V~~~~~l~h 191 (377)
++||+|++.-++.|
T Consensus 160 ~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 160 GKPDIVYLDPMYPE 173 (258)
T ss_dssp CCCSEEEECCCC--
T ss_pred CCccEEEECCCCCC
Confidence 78999999766555
No 267
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.37 E-value=1.5e-07 Score=90.47 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=65.6
Q ss_pred CCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC--CCC--------------
Q 017080 123 GSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP--YRS-------------- 177 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~-------------- 177 (377)
+.+|||+|||+|.++.. ....+|+|+|+|+.+++.|+++ +++|+.+|+.++. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 57899999999997532 2345999999999999999876 4688999987642 222
Q ss_pred CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 178 DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 178 ~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.+||+|++.-. ...+..++.+.|+|+|.+++...+
T Consensus 294 ~~fD~Vv~dPP---------r~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 294 YQCETIFVDPP---------RSGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp CCEEEEEECCC---------TTCCCHHHHHHHTTSSEEEEEESC
T ss_pred CCCCEEEECcC---------ccccHHHHHHHHhCCCEEEEEECC
Confidence 37999987421 112455677777888888877654
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.36 E-value=2e-07 Score=89.79 Aligned_cols=91 Identities=18% Similarity=0.071 Sum_probs=69.3
Q ss_pred CCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc---C-------------------CeEEEeeCCCCC-
Q 017080 122 SGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR---G-------------------HEVLVADAVNLP- 174 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~---~-------------------~~~~~~d~~~~~- 174 (377)
++.+|||+|||+|.++- ..+..+|+++|+++.+++.++++ + ++++.+|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 57899999999999642 24567899999999999998875 2 567778876642
Q ss_pred CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 175 YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 175 ~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...++||+|++.- . .. ...++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lDP-~---~~---~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---GS---PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S---SC---CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C---CC---HHHHHHHHHHhcCCCCEEEEEe
Confidence 1145799999642 1 12 3578999999999999888875
No 269
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.31 E-value=2.3e-06 Score=78.99 Aligned_cols=97 Identities=21% Similarity=0.203 Sum_probs=75.6
Q ss_pred CCCCEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHHc------------CCeEEEeeCCCC-CCCCCceeEE
Q 017080 121 PSGSLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVDR------------GHEVLVADAVNL-PYRSDFGDAA 183 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~~-~~~~~~fD~V 183 (377)
+...+||=||.|.|..++. .+..+|+.||+++..++.+++. +++++.+|+..+ .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4567999999999997653 3456999999999999999864 478899999874 3456789999
Q ss_pred Eeccc-----hhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 184 ISIAV-----LHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 184 ~~~~~-----l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+.-.. -.++-. ..+++.+++.|+|||+++.....
T Consensus 162 i~D~~dp~~~~~~L~t----~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFT----SAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCSSC----CHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcC----HHHHHHHHHHhCCCCEEEEecCC
Confidence 97532 122333 47999999999999999987543
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.28 E-value=4.3e-07 Score=87.63 Aligned_cols=92 Identities=18% Similarity=-0.003 Sum_probs=70.9
Q ss_pred CCCCEEEEECCccCcccc----cCCC-ceEEEEeCCHHHHHHHHHc-------C--CeEEEeeCCCCC--CCCCceeEEE
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPD-CFFVGCDISPSLIKICVDR-------G--HEVLVADAVNLP--YRSDFGDAAI 184 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~-~~v~gvD~s~~~~~~a~~~-------~--~~~~~~d~~~~~--~~~~~fD~V~ 184 (377)
.++.+|||++||+|.++- ..++ .+|+++|+++.+++.++++ + +.++.+|+..+. ...++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 467899999999998642 2345 5899999999999999987 2 677888876531 1246799999
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+.- ... +..++..+.+.|+|||+++++.
T Consensus 131 lDP----~g~---~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----FGT---PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----SSC---CHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----CcC---HHHHHHHHHHHhCCCCEEEEEe
Confidence 864 112 3468999999999999888876
No 271
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.28 E-value=1.4e-06 Score=82.73 Aligned_cols=94 Identities=13% Similarity=0.087 Sum_probs=68.3
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
+.+|++|||+||++|.|+.. ..++.|++||+.+-........++.++++|+..+..+.++||+|+|-.+..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~------- 281 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK------- 281 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC-------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC-------
Confidence 57899999999999999753 567899999987643333333379999999998877778999999977653
Q ss_pred HHHHHHHHHHccccC---cEEEEEEc
Q 017080 198 RKKAIEELVRVVKKG---SLVLITVW 220 (377)
Q Consensus 198 ~~~~l~~~~r~Lkpg---G~l~i~~~ 220 (377)
+...+..+.+.|..| +.++..-.
T Consensus 282 p~~~~~l~~~wl~~~~~~~aI~~lKL 307 (375)
T 4auk_A 282 PAKVAALMAQWLVNGWCRETIFNLKL 307 (375)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEC
T ss_pred hHHhHHHHHHHHhccccceEEEEEEe
Confidence 455555555555544 55444433
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.27 E-value=4.4e-07 Score=91.50 Aligned_cols=102 Identities=9% Similarity=0.149 Sum_probs=75.7
Q ss_pred CCCCCEEEEECCccCccccc--------C--------------CCceEEEEeCCHHHHHHHHHc----C--------CeE
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--------N--------------PDCFFVGCDISPSLIKICVDR----G--------HEV 165 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--------~--------------~~~~v~gvD~s~~~~~~a~~~----~--------~~~ 165 (377)
..++.+|||.|||+|.++.. . ....++|+|+++.+++.|+.+ + ..+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 45678999999999997521 1 124799999999999999876 2 567
Q ss_pred EEeeCCCCC-CCCCceeEEEeccchhhcCC-----------hHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 166 LVADAVNLP-YRSDFGDAAISIAVLHHLST-----------ESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 166 ~~~d~~~~~-~~~~~fD~V~~~~~l~h~~~-----------~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
..+|....+ ...++||+|+++-.+..... ......++.++.+.|||||++.+..+.
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 888876643 34578999999755443221 111247999999999999999998764
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.24 E-value=8.3e-07 Score=81.87 Aligned_cols=59 Identities=20% Similarity=0.266 Sum_probs=48.0
Q ss_pred CCCCCCEEEEECCccCccccc-----CC-CceEEEEeCCHHHHHHHHHc---CCeEEEeeCCCCCCCC
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL-----NP-DCFFVGCDISPSLIKICVDR---GHEVLVADAVNLPYRS 177 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~-----~~-~~~v~gvD~s~~~~~~a~~~---~~~~~~~d~~~~~~~~ 177 (377)
.+.++.+|||||||+|.++.. .. +.+|+|+|+|+.|++.++++ +++++++|+..+++++
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 456788999999999998642 11 24599999999999999875 6899999999987643
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.24 E-value=8.7e-07 Score=82.57 Aligned_cols=77 Identities=17% Similarity=0.302 Sum_probs=59.1
Q ss_pred hHHHHHHHhCCCCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCC--CC-
Q 017080 110 WPKVATFLNSLPSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLP--YR- 176 (377)
Q Consensus 110 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~--~~- 176 (377)
...+...+. +.++.+|||+|||+|.++. ..++.+|+|+|+|+.+++.|+++ ++.++++|+.+++ +.
T Consensus 15 l~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 15 VREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 344445543 4678899999999999753 35678999999999999999876 4789999998764 22
Q ss_pred --CCceeEEEecc
Q 017080 177 --SDFGDAAISIA 187 (377)
Q Consensus 177 --~~~fD~V~~~~ 187 (377)
.++||.|++..
T Consensus 94 ~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 94 LGIEKVDGILMDL 106 (301)
T ss_dssp TTCSCEEEEEEEC
T ss_pred cCCCCCCEEEEcC
Confidence 15899998754
No 275
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.22 E-value=8e-07 Score=90.44 Aligned_cols=93 Identities=13% Similarity=0.083 Sum_probs=68.6
Q ss_pred CCEEEEECCccCcccc----c----C---------CCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCCCC--
Q 017080 123 GSLVLDAGCGNGKYLG----L----N---------PDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLPYR-- 176 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~----~----~---------~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~-- 176 (377)
+..|||||||+|.+.. . . ...+|++||-|+.+....+.. .|+++.+|++++.++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 4689999999999731 1 1 234999999999766444332 489999999998664
Q ss_pred ---CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEE
Q 017080 177 ---SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 177 ---~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
.++.|+||+-.+-..+ +.|.....|..+.+.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl-~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFG-DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTB-GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEecccccc-chhccHHHHHHHHHhCCCCcEEE
Confidence 5789999997653333 33335678888899999999754
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.22 E-value=3.4e-06 Score=87.53 Aligned_cols=103 Identities=20% Similarity=0.199 Sum_probs=72.1
Q ss_pred CCCCCCEEEEECCccCcccc--------cCC--------------------------------------CceEEEEeCCH
Q 017080 119 SLPSGSLVLDAGCGNGKYLG--------LNP--------------------------------------DCFFVGCDISP 152 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~--------~~~--------------------------------------~~~v~gvD~s~ 152 (377)
...++..|||.+||+|.++. ..| ...++|+|+++
T Consensus 187 ~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~ 266 (703)
T 3v97_A 187 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 266 (703)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH
T ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH
Confidence 44577899999999999741 112 25799999999
Q ss_pred HHHHHHHHc----C----CeEEEeeCCCCC--CCCCceeEEEeccchhh-cCChHHHHHHHHHHH---HccccCcEEEEE
Q 017080 153 SLIKICVDR----G----HEVLVADAVNLP--YRSDFGDAAISIAVLHH-LSTESRRKKAIEELV---RVVKKGSLVLIT 218 (377)
Q Consensus 153 ~~~~~a~~~----~----~~~~~~d~~~~~--~~~~~fD~V~~~~~l~h-~~~~~~~~~~l~~~~---r~LkpgG~l~i~ 218 (377)
.+++.|+.+ + ++|.++|+.++. ..+++||+|+++=-... +.+......+.+.+. +.+.|||.+++.
T Consensus 267 ~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 267 RVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 999999987 2 689999998874 33448999999843321 222222444555444 445589999998
Q ss_pred EcC
Q 017080 219 VWA 221 (377)
Q Consensus 219 ~~~ 221 (377)
+..
T Consensus 347 t~~ 349 (703)
T 3v97_A 347 SAS 349 (703)
T ss_dssp ESC
T ss_pred eCC
Confidence 754
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.21 E-value=5e-07 Score=82.11 Aligned_cols=70 Identities=9% Similarity=0.059 Sum_probs=53.3
Q ss_pred CCCCCCEEEEECCccCcccccCCCce--EEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCCC-----CceeEEEec
Q 017080 119 SLPSGSLVLDAGCGNGKYLGLNPDCF--FVGCDISPSLIKICVDR-----GHEVLVADAVNLPYRS-----DFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~~~~~~--v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~-----~~fD~V~~~ 186 (377)
.+.++.+|||||||+|.++....+.+ |+|+|+++.|++.++++ +++++.+|+..+++++ +..|.|+++
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred CCCCcCEEEEECCCCcHHHHhhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEEC
Confidence 35678899999999999865322346 99999999999999886 5789999999887543 234566665
Q ss_pred cc
Q 017080 187 AV 188 (377)
Q Consensus 187 ~~ 188 (377)
-.
T Consensus 98 lP 99 (252)
T 1qyr_A 98 LP 99 (252)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.19 E-value=3.1e-07 Score=83.41 Aligned_cols=103 Identities=13% Similarity=0.084 Sum_probs=68.6
Q ss_pred CCCCCCEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHH-----cCCeEEEeeCCCCCCCCCceeEEEeccch
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVD-----RGHEVLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~-----~~~~~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
.+.++.+|||+|||+|.|++. .+...|+|+|++..+...+.. .++..+..++....++.+++|+|+|-.+.
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGE 166 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCcc
Confidence 467888999999999999753 344589999998664322221 02233333333233557899999998765
Q ss_pred hhcCC----hHHHHHHHHHHHHccccC--cEEEEEEcCC
Q 017080 190 HHLST----ESRRKKAIEELVRVVKKG--SLVLITVWAV 222 (377)
Q Consensus 190 ~h~~~----~~~~~~~l~~~~r~Lkpg--G~l~i~~~~~ 222 (377)
. ... ..+...+|.-+.++|+|| |.+++-.+..
T Consensus 167 n-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 167 S-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred C-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 5 222 111224577778999999 9999998873
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.18 E-value=1.7e-06 Score=87.94 Aligned_cols=91 Identities=11% Similarity=0.193 Sum_probs=66.4
Q ss_pred CCEEEEECCccCcccc------c--CCCceEEEEeCCHHHHHHHHHc--------CCeEEEeeCCCCCCCCCceeEEEec
Q 017080 123 GSLVLDAGCGNGKYLG------L--NPDCFFVGCDISPSLIKICVDR--------GHEVLVADAVNLPYRSDFGDAAISI 186 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~------~--~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~V~~~ 186 (377)
+..|||||||+|.+.. . ....+|++||-|+.+. .+++. .|+++.+|++++.+| +++|+||+-
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 4589999999998731 1 2334899999998543 34432 489999999998765 679999996
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
.+=..+-.+. ...+|....|.|||||.++
T Consensus 436 wMG~fLl~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccC-CHHHHHHHHHhcCCCcEEc
Confidence 5544443333 4578888899999999753
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.06 E-value=5.2e-06 Score=83.61 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=69.9
Q ss_pred CEEEEECCccCccccc----C---------------CCceEEEEeCCHHHHHHHHHc----CC--eE--EEeeCCCCC-C
Q 017080 124 SLVLDAGCGNGKYLGL----N---------------PDCFFVGCDISPSLIKICVDR----GH--EV--LVADAVNLP-Y 175 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~~----~---------------~~~~v~gvD~s~~~~~~a~~~----~~--~~--~~~d~~~~~-~ 175 (377)
.+|||.+||+|.++.. . ....++|+|+++.++..|+.+ ++ .+ .++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 3999999999987521 0 146899999999999999876 32 23 666765543 4
Q ss_pred CCCceeEEEeccchhh-------------------------cCCh-HHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 176 RSDFGDAAISIAVLHH-------------------------LSTE-SRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 176 ~~~~fD~V~~~~~l~h-------------------------~~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
++.+||+|+++=.+.. ++.. ..-..+++.+.+.|||||++.+..+.
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 5678999999643321 1110 00136899999999999999998765
No 281
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.04 E-value=4.7e-05 Score=76.51 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=74.7
Q ss_pred CCCCEEEEECCccCccccc-------CCCceEEEEeCCHHHHHHHHHc----CC-----eEEEeeCCCC--C-CCCCcee
Q 017080 121 PSGSLVLDAGCGNGKYLGL-------NPDCFFVGCDISPSLIKICVDR----GH-----EVLVADAVNL--P-YRSDFGD 181 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~-------~~~~~v~gvD~s~~~~~~a~~~----~~-----~~~~~d~~~~--~-~~~~~fD 181 (377)
.++.+|||.+||+|.++.. .....++|+|+++.+...|+.+ ++ .+..+|.... | .....||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 3677999999999997632 2356999999999999999875 33 5788888765 4 4567899
Q ss_pred EEEeccchhh-------------------cCCh-HHHHHHHHHHHHccc-cCcEEEEEEcCC
Q 017080 182 AAISIAVLHH-------------------LSTE-SRRKKAIEELVRVVK-KGSLVLITVWAV 222 (377)
Q Consensus 182 ~V~~~~~l~h-------------------~~~~-~~~~~~l~~~~r~Lk-pgG~l~i~~~~~ 222 (377)
+|+++=.+.. ++.. ..-..+++.+.+.|+ |||++.+..+..
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 9998622210 1100 001358999999999 999999887653
No 282
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.01 E-value=4.6e-06 Score=68.28 Aligned_cols=89 Identities=18% Similarity=0.148 Sum_probs=62.3
Q ss_pred CCCCCEEEEECCccCc-cccc---CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCC-CceeEEEeccchhhcCC
Q 017080 120 LPSGSLVLDAGCGNGK-YLGL---NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRS-DFGDAAISIAVLHHLST 194 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~-~~~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~-~~fD~V~~~~~l~h~~~ 194 (377)
..++.+|||||||.|. .+.. ..+.+|+++|+++..++ +++.|+.+..... +.||+|.+...=
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~--------~v~dDiF~P~~~~Y~~~DLIYsirPP----- 99 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG--------IVRDDITSPRMEIYRGAALIYSIRPP----- 99 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT--------EECCCSSSCCHHHHTTEEEEEEESCC-----
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc--------eEEccCCCCcccccCCcCEEEEcCCC-----
Confidence 3456799999999994 5432 47889999999998755 8899998843211 489999886531
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEcCCCc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVWAVEQ 224 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~ 224 (377)
.| +...+.++++.+ |.-++|.....+.
T Consensus 100 ~E-l~~~i~~lA~~v--~adliI~pL~~E~ 126 (153)
T 2k4m_A 100 AE-IHSSLMRVADAV--GARLIIKPLTGED 126 (153)
T ss_dssp TT-THHHHHHHHHHH--TCEEEEECBTTBC
T ss_pred HH-HHHHHHHHHHHc--CCCEEEEcCCCCc
Confidence 12 556666666654 5677777665543
No 283
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.98 E-value=3.2e-05 Score=67.47 Aligned_cols=91 Identities=10% Similarity=0.089 Sum_probs=65.4
Q ss_pred CCCCEEEEECCccCc-ccccCCCceEEEEeCCHHHHHHHHHc----C------CeEEEeeCCCC---------------C
Q 017080 121 PSGSLVLDAGCGNGK-YLGLNPDCFFVGCDISPSLIKICVDR----G------HEVLVADAVNL---------------P 174 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~-~~~~~~~~~v~gvD~s~~~~~~a~~~----~------~~~~~~d~~~~---------------~ 174 (377)
.+..+|||+|||... ++...++.+|+.+|.++...+.|+++ + ++++.+|+... +
T Consensus 29 ~~a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 29 EEAEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp HHCSEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred hCCCEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 356799999997433 22233478999999999999998864 3 56788886542 1
Q ss_pred --------C-CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 175 --------Y-RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 175 --------~-~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. ..++||+|+.-+-. ....+..+.+.|+|||+|++-+
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~k--------~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGRF--------RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSSS--------HHHHHHHHHHHCSSCEEEEETT
T ss_pred HHhhhhhccccCCCCCEEEEeCCC--------chhHHHHHHHhcCCCeEEEEeC
Confidence 1 13789999997631 3466677789999999986643
No 284
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.98 E-value=2.2e-06 Score=82.96 Aligned_cols=67 Identities=13% Similarity=0.052 Sum_probs=53.0
Q ss_pred CCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc------C---CeEEEeeCCCC-CC-CCCceeEEEec
Q 017080 120 LPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR------G---HEVLVADAVNL-PY-RSDFGDAAISI 186 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~------~---~~~~~~d~~~~-~~-~~~~fD~V~~~ 186 (377)
+.+|.+|||+|||+|..+.. ..+.+|+|+|+|+.+++.|+.+ + ++++++|+.+. +. ++++||+|++.
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 34589999999999997432 3467999999999999999876 2 67899999874 32 24689999993
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.98 E-value=4.4e-06 Score=76.36 Aligned_cols=110 Identities=15% Similarity=0.084 Sum_probs=69.2
Q ss_pred HHHHHHHhCCCCCCEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHH-----cCCeEEEeeCCCCCCCCCcee
Q 017080 111 PKVATFLNSLPSGSLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVD-----RGHEVLVADAVNLPYRSDFGD 181 (377)
Q Consensus 111 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~-----~~~~~~~~d~~~~~~~~~~fD 181 (377)
.++.+. ..+.++.+|||+||++|.|+.. .+-..|+|+|++..+...... .++.....++....+..+.+|
T Consensus 71 ~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~D 149 (300)
T 3eld_A 71 RWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSD 149 (300)
T ss_dssp HHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCS
T ss_pred HHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcC
Confidence 344444 5567899999999999998753 233478999997543211100 012222222222334567899
Q ss_pred EEEeccchhhcCC----hHHHHHHHHHHHHccccC-cEEEEEEcCC
Q 017080 182 AAISIAVLHHLST----ESRRKKAIEELVRVVKKG-SLVLITVWAV 222 (377)
Q Consensus 182 ~V~~~~~l~h~~~----~~~~~~~l~~~~r~Lkpg-G~l~i~~~~~ 222 (377)
+|+|..+-. ... ..+-..+|.-+.++|+|| |.+++-.+..
T Consensus 150 lVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~ 194 (300)
T 3eld_A 150 TLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAP 194 (300)
T ss_dssp EEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESST
T ss_pred EEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 999976554 222 111234577778999999 9999998873
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.91 E-value=2.4e-06 Score=77.80 Aligned_cols=96 Identities=13% Similarity=0.151 Sum_probs=61.9
Q ss_pred CCCCEEEEECCccCccc----cc-------CCC-----ceEEEEeCCH---HHHH-----------HHHHc---------
Q 017080 121 PSGSLVLDAGCGNGKYL----GL-------NPD-----CFFVGCDISP---SLIK-----------ICVDR--------- 161 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~----~~-------~~~-----~~v~gvD~s~---~~~~-----------~a~~~--------- 161 (377)
.++.+|||||+|+|..+ .. .|. .+++++|..| .++. .+++.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34579999999999943 11 453 5899999876 4433 22221
Q ss_pred ------------CCeEEEeeCCC-CCC-CC---CceeEEEeccc-hhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 162 ------------GHEVLVADAVN-LPY-RS---DFGDAAISIAV-LHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 162 ------------~~~~~~~d~~~-~~~-~~---~~fD~V~~~~~-l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
+++++.+|+.+ ++. ++ ..||+|+.-.. -...++-- -..+++.++++|||||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw-~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMW-TQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGC-CHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhc-CHHHHHHHHHHcCCCcEEEE
Confidence 24567888766 442 22 27999998531 11111100 15799999999999999774
No 287
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.89 E-value=4.2e-06 Score=76.16 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=59.6
Q ss_pred CCCCC--CEEEEECCccCccccc--CCCceEEEEeCCHHH-------HHHHHH---------cCCeEEEeeCCC-CCCCC
Q 017080 119 SLPSG--SLVLDAGCGNGKYLGL--NPDCFFVGCDISPSL-------IKICVD---------RGHEVLVADAVN-LPYRS 177 (377)
Q Consensus 119 ~~~~~--~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~-------~~~a~~---------~~~~~~~~d~~~-~~~~~ 177 (377)
.+.++ .+|||+|||+|..+-. ..+++|+++|+++.+ ++.++. .+++++.+|+.+ ++...
T Consensus 83 ~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 83 GIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp TCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred cccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 35566 8999999999996421 236789999999976 333321 237889999877 33223
Q ss_pred CceeEEEeccchhhcCChHHHHHHHHHHHHccccCc
Q 017080 178 DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGS 213 (377)
Q Consensus 178 ~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG 213 (377)
++||+|++.-++.+-.. .+++++..++|++.+
T Consensus 163 ~~fDvV~lDP~y~~~~~----saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPMFPHKQK----SALVKKEMRVFQSLV 194 (258)
T ss_dssp SCCSEEEECCCCCCCCC---------HHHHHHHHHS
T ss_pred ccCCEEEEcCCCCCccc----chHHHHHHHHHHHhh
Confidence 47999999877765322 256666667776654
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.83 E-value=4.2e-05 Score=79.11 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=69.6
Q ss_pred CCCCEEEEECCccCcccc----cCC---CceEEEEeCCHHHHHHH--HHc--------C---CeEEEeeCCCC-CCCCCc
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNP---DCFFVGCDISPSLIKIC--VDR--------G---HEVLVADAVNL-PYRSDF 179 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~---~~~v~gvD~s~~~~~~a--~~~--------~---~~~~~~d~~~~-~~~~~~ 179 (377)
+++.+|||.|||+|.++. ..+ ...++|+|+++.+++.| +.+ + ..+...|+... +...+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 457899999999999752 222 35899999999999998 432 1 23444455443 234578
Q ss_pred eeEEEeccchhh-cCChH-------------------------HHHHHHHHHHHccccCcEEEEEEcCC
Q 017080 180 GDAAISIAVLHH-LSTES-------------------------RRKKAIEELVRVVKKGSLVLITVWAV 222 (377)
Q Consensus 180 fD~V~~~~~l~h-~~~~~-------------------------~~~~~l~~~~r~LkpgG~l~i~~~~~ 222 (377)
||+|+++=-... ..... -...+++.+.+.|+|||++.+..+..
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 999999644311 11100 02457889999999999999988653
No 289
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.77 E-value=5.7e-06 Score=74.02 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=61.1
Q ss_pred CCCCCCEEEEECCccCccccc---CCCc-eEEEEeCCHH--HHHHHHH-cCCeEE---Ee-eCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDC-FFVGCDISPS--LIKICVD-RGHEVL---VA-DAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~-~v~gvD~s~~--~~~~a~~-~~~~~~---~~-d~~~~~~~~~~fD~V~~~~ 187 (377)
-++|+.+|||+||+.|.|+.. ..+. .|.|.++... +...... .++.|+ ++ |+.+++ ..++|+|+|-.
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDM 147 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCDI 147 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEECC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeCC
Confidence 578999999999999998754 2112 3344443332 1111000 234333 36 887743 56899999966
Q ss_pred chh---hcCChHHHHHHHHHHHHccccCc-EEEEEEcCC
Q 017080 188 VLH---HLSTESRRKKAIEELVRVVKKGS-LVLITVWAV 222 (377)
Q Consensus 188 ~l~---h~~~~~~~~~~l~~~~r~LkpgG-~l~i~~~~~ 222 (377)
.=. ...|..+-..+|.-+.++|+||| .+++-.+..
T Consensus 148 APnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 148 GESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 332 11111111236767779999999 999988773
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.74 E-value=4.1e-05 Score=72.85 Aligned_cols=113 Identities=17% Similarity=0.118 Sum_probs=77.3
Q ss_pred HHHHHhCCCCCCEEEEECCccCc----ccccCCCceEEEEeCCHHHHHHHHHc-------------CCeEEEeeCCCCC-
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGK----YLGLNPDCFFVGCDISPSLIKICVDR-------------GHEVLVADAVNLP- 174 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~----~~~~~~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~~d~~~~~- 174 (377)
+...+....+|.+|||+.+|.|. ++.......|+++|+|+.-++..+++ ++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 34445567889999999999997 23345556899999999988776654 2455666766653
Q ss_pred CCCCceeEEEeccc--------hhhcCC------hH-------HHHHHHHHHHHccccCcEEEEEEcCCCcc
Q 017080 175 YRSDFGDAAISIAV--------LHHLST------ES-------RRKKAIEELVRVVKKGSLVLITVWAVEQE 225 (377)
Q Consensus 175 ~~~~~fD~V~~~~~--------l~h~~~------~~-------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 225 (377)
...+.||.|++-.- +..-++ .+ ...++|....+.|||||+|+-++-+....
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 34678999997321 111010 01 12478889999999999999988665433
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.71 E-value=3.3e-05 Score=73.56 Aligned_cols=99 Identities=19% Similarity=0.113 Sum_probs=70.2
Q ss_pred CCCCEEEEECCccCccccc---CCCceEEEEeCCHHHHHHHHHc---------------CCeEEEeeCCCCC----CCCC
Q 017080 121 PSGSLVLDAGCGNGKYLGL---NPDCFFVGCDISPSLIKICVDR---------------GHEVLVADAVNLP----YRSD 178 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~---~~~~~v~gvD~s~~~~~~a~~~---------------~~~~~~~d~~~~~----~~~~ 178 (377)
.++.+||=||.|.|..++. ++..+|+.|||++..++.+++. +++++.+|+..+- -..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3568999999999997653 5667999999999999999975 2456677765421 1246
Q ss_pred ceeEEEeccchh-------hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 179 FGDAAISIAVLH-------HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 179 ~fD~V~~~~~l~-------h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+||+|+.-..-. ......--..+++.+++.|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 899999853211 11111112578899999999999988763
No 292
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.56 E-value=3.2e-05 Score=90.49 Aligned_cols=137 Identities=13% Similarity=0.127 Sum_probs=61.6
Q ss_pred CCCCEEEEECCccCccccc-------CC--CceEEEEeCCHHHHHHHHHc----CCeEEEeeCCCC-CCCCCceeEEEec
Q 017080 121 PSGSLVLDAGCGNGKYLGL-------NP--DCFFVGCDISPSLIKICVDR----GHEVLVADAVNL-PYRSDFGDAAISI 186 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~~-------~~--~~~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~-~~~~~~fD~V~~~ 186 (377)
.+..+|||||.|+|..+.. .+ ..+++..|+|+...+.++++ .+.....|..+. ++...+||+|++.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc
Confidence 3567999999999986432 11 24789999998877666554 122211233332 3345679999999
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhH
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPET 266 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~ 266 (377)
.++|..++ ....|++++++|||||.+++.+..... +. .....|+... ........+.++|.++
T Consensus 1319 ~vl~~t~~---~~~~l~~~~~lL~p~G~l~~~e~~~~~--------~~----g~~~~~~~~~--~r~~~~~~~~~~w~~~ 1381 (2512)
T 2vz8_A 1319 CALATLGD---PAVAVGNMAATLKEGGFLLLHTLLAGH--------PL----GEMVGFLTSP--EQGGRHLLSQDQWESL 1381 (2512)
T ss_dssp CC-----------------------CCEEEEEEC----------------------------------------CTTTTS
T ss_pred cccccccc---HHHHHHHHHHhcCCCcEEEEEeccccc--------cc----cccccccccc--cccCCcccCHHHHHHH
Confidence 99988887 789999999999999999887643210 00 0011121110 0011234667788889
Q ss_pred hhcCCCcc
Q 017080 267 EDNGSEEQ 274 (377)
Q Consensus 267 l~~aGF~~ 274 (377)
|..+||..
T Consensus 1382 l~~~gf~~ 1389 (2512)
T 2vz8_A 1382 FAGASLHL 1389 (2512)
T ss_dssp STTTTEEE
T ss_pred HHhCCCce
Confidence 99999966
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.53 E-value=8.5e-05 Score=67.62 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=70.3
Q ss_pred CCCCCCEEEEECCccCccccc---CCCc-eEEEEeCCHHHHH------HHHHcCCeEEEe-eCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDC-FFVGCDISPSLIK------ICVDRGHEVLVA-DAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~-~v~gvD~s~~~~~------~a~~~~~~~~~~-d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||+||++|.|+.+ ..++ .|+|+|+...-.+ .-.-+.+.+... |+..++ ..++|+|+|-.
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~--~~~~D~ivcDi 168 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRP--SECCDTLLCDI 168 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSC--CCCCSEEEECC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCC--CCCCCEEEEEC
Confidence 467888999999999998752 4444 7999999776111 111123667766 776665 36699999976
Q ss_pred chhhcCChH----HHHHHHHHHHHccccC-cEEEEEEcCCC
Q 017080 188 VLHHLSTES----RRKKAIEELVRVVKKG-SLVLITVWAVE 223 (377)
Q Consensus 188 ~l~h~~~~~----~~~~~l~~~~r~Lkpg-G~l~i~~~~~~ 223 (377)
. +.-++.. +-..+|.-+.++|++| |-++|-++.+.
T Consensus 169 g-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 169 G-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred c-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 6 5555522 1234677778899999 89998887764
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.28 E-value=0.00023 Score=65.31 Aligned_cols=95 Identities=14% Similarity=-0.006 Sum_probs=67.0
Q ss_pred CCCCEEEEECCccCcccc----c-----CCCceEEEEeCCHH--------------------------HHHHHHHc----
Q 017080 121 PSGSLVLDAGCGNGKYLG----L-----NPDCFFVGCDISPS--------------------------LIKICVDR---- 161 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~-----~~~~~v~gvD~s~~--------------------------~~~~a~~~---- 161 (377)
..+.+|||+|+.+|..+. . .++.+|+++|.... .++.++++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 345699999999998431 1 15789999996421 23344433
Q ss_pred -----CCeEEEeeCCC-CC-CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 162 -----GHEVLVADAVN-LP-YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 162 -----~~~~~~~d~~~-~~-~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+++++.+|+.+ ++ +++++||+|+.-.-.+ .. ....|..+...|+|||++++-++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~---~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ES---TWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HH---HHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--cc---HHHHHHHHHhhcCCCEEEEEcCC
Confidence 47789999876 44 4467899999876421 11 45789999999999999888665
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.25 E-value=0.00021 Score=63.08 Aligned_cols=102 Identities=16% Similarity=0.120 Sum_probs=69.1
Q ss_pred CCCCCCEEEEECCccCccccc---CCCc-eEEEEeCCHHHHHH---HHH---cCCeEEEe-eCCCCCCCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGNGKYLGL---NPDC-FFVGCDISPSLIKI---CVD---RGHEVLVA-DAVNLPYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~G~~~~~---~~~~-~v~gvD~s~~~~~~---a~~---~~~~~~~~-d~~~~~~~~~~fD~V~~~~ 187 (377)
.+.++.+|||+||++|.|+.+ ..++ .|+|+|+...-.+. .+. +.++|..+ |+..++ ..++|+|+|-.
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDI 152 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDI 152 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEec
Confidence 467889999999999998752 3343 89999997653211 000 24788888 876654 36799999965
Q ss_pred chhhcCCh----HHHHHHHHHHHHccccCcEEEEEEcCCCc
Q 017080 188 VLHHLSTE----SRRKKAIEELVRVVKKGSLVLITVWAVEQ 224 (377)
Q Consensus 188 ~l~h~~~~----~~~~~~l~~~~r~LkpgG~l~i~~~~~~~ 224 (377)
.= .-++. ++-..+|.-+.++|++ |-+++-++.+..
T Consensus 153 ge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 153 GE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred CC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 43 22221 1123467777899998 788888876654
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.20 E-value=0.0018 Score=64.89 Aligned_cols=134 Identities=18% Similarity=0.265 Sum_probs=85.6
Q ss_pred HHHHHHHHHhhCcccc-----cccccchHHHHHHHh---CCCCCCEEEEECCccCccccc--------C---------CC
Q 017080 88 KKYVHRVYDAIAPHFS-----STRFAKWPKVATFLN---SLPSGSLVLDAGCGNGKYLGL--------N---------PD 142 (377)
Q Consensus 88 ~~~~~~~y~~~a~~y~-----~~~~~~~~~~~~~l~---~~~~~~~vLDiGcG~G~~~~~--------~---------~~ 142 (377)
.+....+|...-..|. ...+...+.+..++. ...++.+|+|-+||+|.|+.. . ..
T Consensus 175 ~d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~ 254 (530)
T 3ufb_A 175 MHTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQE 254 (530)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhh
Confidence 3445555654444332 123444455544443 345678999999999997521 1 13
Q ss_pred ceEEEEeCCHHHHHHHHHc----C---CeEEEeeCCCCCC----CCCceeEEEeccchhh-------------cCChHHH
Q 017080 143 CFFVGCDISPSLIKICVDR----G---HEVLVADAVNLPY----RSDFGDAAISIAVLHH-------------LSTESRR 198 (377)
Q Consensus 143 ~~v~gvD~s~~~~~~a~~~----~---~~~~~~d~~~~~~----~~~~fD~V~~~~~l~h-------------~~~~~~~ 198 (377)
..++|+|+++.+...|+-+ + ..+..+|....+. ....||+|+++=.+.- .+..+.-
T Consensus 255 ~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~ 334 (530)
T 3ufb_A 255 SSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETA 334 (530)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHH
T ss_pred hhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhH
Confidence 4799999999999999875 2 4566777665442 2357999999654421 1111112
Q ss_pred HHHHHHHHHccc-------cCcEEEEEEcC
Q 017080 199 KKAIEELVRVVK-------KGSLVLITVWA 221 (377)
Q Consensus 199 ~~~l~~~~r~Lk-------pgG~l~i~~~~ 221 (377)
..+++.+.+.|| |||++.+..+.
T Consensus 335 ~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 335 MLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp HHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred HHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 467888888887 79999998764
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.11 E-value=0.00075 Score=61.54 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=54.5
Q ss_pred hHHHHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHH---cCCeEEEeeCCCCC-----CCCCc
Q 017080 110 WPKVATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVD---RGHEVLVADAVNLP-----YRSDF 179 (377)
Q Consensus 110 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~---~~~~~~~~d~~~~~-----~~~~~ 179 (377)
..++...+. +.++..+||.+||.|..+.. ..+.+|+|+|.++.+++.+++ .++.++.+++.+++ ...++
T Consensus 11 l~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~ 89 (285)
T 1wg8_A 11 YQEALDLLA-VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVER 89 (285)
T ss_dssp HHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSC
T ss_pred HHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCC
Confidence 445555554 56788999999999997642 127799999999999999886 24667777776653 12246
Q ss_pred eeEEEec
Q 017080 180 GDAAISI 186 (377)
Q Consensus 180 fD~V~~~ 186 (377)
+|.|++.
T Consensus 90 vDgIL~D 96 (285)
T 1wg8_A 90 VDGILAD 96 (285)
T ss_dssp EEEEEEE
T ss_pred cCEEEeC
Confidence 7777763
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.02 E-value=0.00061 Score=62.01 Aligned_cols=108 Identities=17% Similarity=0.228 Sum_probs=71.5
Q ss_pred HHHHHHHh----CCCCCCEEEEECC------ccCccc-c-cCCC-ceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCC
Q 017080 111 PKVATFLN----SLPSGSLVLDAGC------GNGKYL-G-LNPD-CFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRS 177 (377)
Q Consensus 111 ~~~~~~l~----~~~~~~~vLDiGc------G~G~~~-~-~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~ 177 (377)
.++.+++. .++.+++|||+|+ -+|.+. + ..|. +.|+++|+.+-.. .. -.++++|...... .
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s----da-~~~IqGD~~~~~~-~ 167 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS----DA-DSTLIGDCATVHT-A 167 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC----SS-SEEEESCGGGEEE-S
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc----CC-CeEEEcccccccc-C
Confidence 34555654 3578999999996 555542 2 3665 6999999977431 11 2458899765432 5
Q ss_pred CceeEEEeccc---hhhcC-----ChHHHHHHHHHHHHccccCcEEEEEEcCCCc
Q 017080 178 DFGDAAISIAV---LHHLS-----TESRRKKAIEELVRVVKKGSLVLITVWAVEQ 224 (377)
Q Consensus 178 ~~fD~V~~~~~---l~h~~-----~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~ 224 (377)
++||+|++-.. -.+.. ...-.+.++.-+.++|+|||.|++-.+-...
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 78999999542 22211 1112566777788899999999999876543
No 299
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.98 E-value=0.0048 Score=58.04 Aligned_cols=145 Identities=11% Similarity=0.089 Sum_probs=90.7
Q ss_pred CCCCEEEEECCccCcccc----cCCCceEEEEeCCHHHHHHHHHc----------------------------CCeEEEe
Q 017080 121 PSGSLVLDAGCGNGKYLG----LNPDCFFVGCDISPSLIKICVDR----------------------------GHEVLVA 168 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~----~~~~~~v~gvD~s~~~~~~a~~~----------------------------~~~~~~~ 168 (377)
.+...|+.+|||.....- ..++..++-||. |..++.-++. +..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 355799999999987542 246788999998 6655443321 3567778
Q ss_pred eCCCCC--------C-CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHH
Q 017080 169 DAVNLP--------Y-RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQK 239 (377)
Q Consensus 169 d~~~~~--------~-~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 239 (377)
|+.+.. . ..+...++++-+++.+++.++ ..++|+.+.+.. |+|.+++.+............. ....
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~-~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~---~m~~ 249 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNE-SQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGA---IMQS 249 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH-HHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHH---HHHH
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH-HHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHH---HHHH
Confidence 887631 1 234568999999999998765 788999998877 7788776654433110000000 0011
Q ss_pred HHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCc
Q 017080 240 YVEEWIGPGSPRVRSPSARTLESIPETEDNGSEE 273 (377)
Q Consensus 240 ~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~ 273 (377)
.+..+.. .+......+.++++..+.|.++||.
T Consensus 250 ~l~~~rg--~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 250 NLKESRN--LEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHC--CCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HhhcccC--CcccccccCCCHHHHHHHHHHCCCC
Confidence 1122111 1222223567888999999999994
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.48 E-value=0.003 Score=58.32 Aligned_cols=41 Identities=24% Similarity=0.324 Sum_probs=35.6
Q ss_pred CCCCEEEEECCccCcccc--cCCCceEEEEeCCHHHHHHHHHc
Q 017080 121 PSGSLVLDAGCGNGKYLG--LNPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~--~~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
.++..|||++||+|..+. ...+.+++|+|+++.+++.|+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Confidence 578899999999999753 35677999999999999999887
No 301
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.66 E-value=0.012 Score=54.24 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=56.2
Q ss_pred CCEEEEECCccCccc--------ccCCCc--eEEEEeCCH------------HHHHHHHHc---------CCeEEEeeCC
Q 017080 123 GSLVLDAGCGNGKYL--------GLNPDC--FFVGCDISP------------SLIKICVDR---------GHEVLVADAV 171 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~--------~~~~~~--~v~gvD~s~------------~~~~~a~~~---------~~~~~~~d~~ 171 (377)
.-+|||+|-|||... +..|.. +++.+|..+ ...+..... .+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 358999999999842 114554 567776421 111111111 2356677876
Q ss_pred C-CC-CCCCceeEEEeccchhhcCChHHH-HHHHHHHHHccccCcEEE
Q 017080 172 N-LP-YRSDFGDAAISIAVLHHLSTESRR-KKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 172 ~-~~-~~~~~fD~V~~~~~l~h~~~~~~~-~~~l~~~~r~LkpgG~l~ 216 (377)
. ++ +.+..||+|+.-.. .--.+++.| ..+++.++++++|||.+.
T Consensus 177 ~~l~~l~~~~~Da~flDgF-sP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAF-SPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHGGGCCSCCEEEEEECCS-CTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHHhhhcccceeEEEeCCC-CcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 5 33 44558999998652 212221111 589999999999999765
No 302
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.58 E-value=0.026 Score=54.14 Aligned_cols=96 Identities=23% Similarity=0.251 Sum_probs=67.4
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC---------CCCceeEE
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLPY---------RSDFGDAA 183 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~---------~~~~fD~V 183 (377)
..+.+|.+||-+|+|. |.++. ...++ +|+++|.|+..++.+++.+..+ .|..+..+ ....+|+|
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET--IDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence 4678899999999976 66542 23466 8999999999999998877753 34332211 12369999
Q ss_pred Eeccchh---------hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 184 ISIAVLH---------HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 184 ~~~~~l~---------h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+-.-.-. |++ +...++++.+.|+|||++++.-
T Consensus 259 id~~g~~~~~~~~~~~~~~----~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTET----PNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EECSCTTCBCSGGGTTSBC----TTHHHHHHHHHEEEEEEEECCS
T ss_pred EECCCCccccccccccccc----cHHHHHHHHHHHhcCCEEEEec
Confidence 8765432 121 2357889999999999987653
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.57 E-value=0.21 Score=46.25 Aligned_cols=142 Identities=9% Similarity=0.023 Sum_probs=88.1
Q ss_pred CEEEEECCccCccc-cc-CC-CceEEEEeCCHHHHHHHHHc----------CCeEEEeeCCCCC---------CCCCcee
Q 017080 124 SLVLDAGCGNGKYL-GL-NP-DCFFVGCDISPSLIKICVDR----------GHEVLVADAVNLP---------YRSDFGD 181 (377)
Q Consensus 124 ~~vLDiGcG~G~~~-~~-~~-~~~v~gvD~s~~~~~~a~~~----------~~~~~~~d~~~~~---------~~~~~fD 181 (377)
..|+++|||-=... +. .+ +..++-+| -|..++..++. +..++.+|+.+ . +..+.-=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 57999999975533 22 23 47999999 48777665543 34577788876 2 1123345
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhhhccccchHHHHhhhhCCCC-----CCcCCCC
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLVTKWTPLTQKYVEEWIGPGS-----PRVRSPS 256 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~-----~~~~~~~ 256 (377)
++++-++++|+++++ ...+++.+...+.||+.+++........... .. ........+.... +......
T Consensus 182 ~~i~Egvl~Yl~~~~-~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~--~~----~~~~~~~~~~~~g~~~~~~l~~~~~ 254 (310)
T 2uyo_A 182 AWLAEGLLMYLPATA-QDGLFTEIGGLSAVGSRIAVETSPLHGDEWR--EQ----MQLRFRRVSDALGFEQAVDVQELIY 254 (310)
T ss_dssp EEEECSCGGGSCHHH-HHHHHHHHHHTCCTTCEEEEECCCTTCSHHH--HH----HHHHHHHHHC-----------CCTT
T ss_pred EEEEechHhhCCHHH-HHHHHHHHHHhCCCCeEEEEEecCCCCcchh--HH----HHHHHHHHHHHcCCcCCCCcccccc
Confidence 788889999999865 8899999999999999988876543221000 00 1111101122111 1112223
Q ss_pred CCC-cccHHhHhhcCCCcc
Q 017080 257 ART-LESIPETEDNGSEEQ 274 (377)
Q Consensus 257 ~~~-~~~l~~~l~~aGF~~ 274 (377)
..+ .+++.++|.+.||+.
T Consensus 255 ~~~~~~~~~~~f~~~G~~~ 273 (310)
T 2uyo_A 255 HDENRAVVADWLNRHGWRA 273 (310)
T ss_dssp CCTTCCCHHHHHTTTTEEE
T ss_pred CCCChHHHHHHHHHCcCcc
Confidence 346 789999999999944
No 304
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.33 E-value=0.039 Score=52.85 Aligned_cols=97 Identities=18% Similarity=0.182 Sum_probs=68.4
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC---------CCCCceeEE
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP---------YRSDFGDAA 183 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~---------~~~~~fD~V 183 (377)
..+.+|.+||-+|+|. |.++. ...++ .|+++|.++..++.+++.+...+ |..+.. .....+|+|
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~~~t~g~g~Dvv 258 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLGEPEVDCA 258 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHHHHhCCCCCCEE
Confidence 4678899999999876 66542 24566 79999999999999998887633 332211 112369999
Q ss_pred Eeccchh---------hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 184 ISIAVLH---------HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 184 ~~~~~l~---------h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+-.-.-. |.++ +...+++..+.|++||.+++.-
T Consensus 259 id~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 259 VDAVGFEARGHGHEGAKHEA---PATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EECCCTTCBCSSTTGGGSBC---TTHHHHHHHHHEEEEEEEEECS
T ss_pred EECCCCcccccccccccccc---hHHHHHHHHHHHhcCCEEEEec
Confidence 8765421 2333 4568899999999999987653
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.87 E-value=0.02 Score=53.35 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=39.9
Q ss_pred cchHHHHHHHhCCCCCCEEEEECCccCccc----cc-CCCceEEEEeCCHHHHHHHH
Q 017080 108 AKWPKVATFLNSLPSGSLVLDAGCGNGKYL----GL-NPDCFFVGCDISPSLIKICV 159 (377)
Q Consensus 108 ~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~----~~-~~~~~v~gvD~s~~~~~~a~ 159 (377)
....+++..+. +.+|..++|..||.|..+ .. .+..+|+|+|.++.+++.++
T Consensus 44 VLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 44 VLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred ccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 34456666664 567889999999999854 22 57789999999999999884
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.57 E-value=0.079 Score=45.17 Aligned_cols=90 Identities=17% Similarity=0.068 Sum_probs=61.5
Q ss_pred CCCCCCEEEEECC--ccCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGC--GNGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGc--G~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.++.+||.+|+ |.|..+. ...+++|+++|.++...+.+++.+.... .|..+.. ...+.+|+++.
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~ 113 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLN 113 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-eeCCcHHHHHHHHHHhCCCCCeEEEE
Confidence 4678899999995 3455432 1456799999999998888876655433 3443321 11246999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
... . ..++.+.+.|+|||++++..
T Consensus 114 ~~g-----~-----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 114 SLA-----G-----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CCC-----T-----HHHHHHHHTEEEEEEEEECS
T ss_pred CCc-----h-----HHHHHHHHHhccCCEEEEEc
Confidence 542 2 35788899999999987753
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.48 E-value=0.056 Score=51.17 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=64.3
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-------CCCCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP-------YRSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-------~~~~~fD~V~~~ 186 (377)
.+.++.+||-+|+|. |.++. ...++ .|+++|.++..++.+++.+..... |..+.. ...+.+|+|+..
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~~~~~gg~D~vid~ 265 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI-NSKTQDPVAAIKEITDGGVNFALES 265 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe-cCCccCHHHHHHHhcCCCCcEEEEC
Confidence 567899999999876 66542 23466 799999999999999887765433 222211 112379998865
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.. . ...++.+.+.|+|||.+++.-
T Consensus 266 ~g-----~----~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 266 TG-----S----PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp SC-----C----HHHHHHHHHTEEEEEEEEECC
T ss_pred CC-----C----HHHHHHHHHHHhcCCEEEEeC
Confidence 32 2 356888999999999988764
No 308
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.01 E-value=0.045 Score=51.38 Aligned_cols=90 Identities=13% Similarity=0.080 Sum_probs=65.0
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
.+.+|.+||-+|+|. |.++. ...+++|+++|.++...+.+++.+......+...+ ...+|+|+-... .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~D~vid~~g-----~ 244 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQC---KEELDFIISTIP-----T 244 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGC---CSCEEEEEECCC-----S
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHH---hcCCCEEEECCC-----c
Confidence 578899999999875 65432 24678999999999999999988766554332222 227999986432 2
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
...+....+.|+|||.+++.-.
T Consensus 245 ----~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 245 ----HYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ----CCCHHHHHTTEEEEEEEEECCC
T ss_pred ----HHHHHHHHHHHhcCCEEEEECC
Confidence 1257778899999999888643
No 309
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.81 E-value=0.054 Score=48.76 Aligned_cols=41 Identities=24% Similarity=0.321 Sum_probs=35.5
Q ss_pred CCCCEEEEECCccCcccc--cCCCceEEEEeCCHHHHHHHHHc
Q 017080 121 PSGSLVLDAGCGNGKYLG--LNPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~--~~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
.++..|||..||+|..+. ...+.+++|+|+++..++.++++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Confidence 678899999999999753 35678999999999999999876
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.76 E-value=0.16 Score=48.12 Aligned_cols=92 Identities=18% Similarity=0.157 Sum_probs=65.7
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----------CCCCceeE
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP----------YRSDFGDA 182 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----------~~~~~fD~ 182 (377)
..+.+|.+||=+|+|. |.++. ...++ .|+++|.++...+.+++.+..... |..+.. ...+.+|+
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV-DPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE-CTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE-CCCCcCHHHHHHhhhhccCCCCCE
Confidence 4578899999999875 55432 25666 999999999999999988765433 221110 22347999
Q ss_pred EEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 183 AISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 183 V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
|+-.. .. ...++.+.+.|+|||.+++.-
T Consensus 257 vid~~-----G~----~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 257 VIECA-----GV----AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEECS-----CC----HHHHHHHHHHEEEEEEEEECS
T ss_pred EEECC-----CC----HHHHHHHHHHhccCCEEEEEe
Confidence 98753 22 357888999999999988764
No 311
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.51 E-value=0.24 Score=46.32 Aligned_cols=92 Identities=20% Similarity=0.269 Sum_probs=64.1
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCC---CCC------CC---CCcee
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAV---NLP------YR---SDFGD 181 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~---~~~------~~---~~~fD 181 (377)
..+.+|.+||-+|+|. |.++. ...+++|+++|.++...+.+++.+..... |.. ++. .. .+.+|
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTL-VVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE-ECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEE-cCcccccHHHHHHHHhccccCCCCC
Confidence 3577899999999875 55432 24677899999999999999887765332 332 110 11 24689
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+|+.... . ...++...+.|+|||.+++.-
T Consensus 243 ~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 243 VTIDCSG-----N----EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp EEEECSC-----C----HHHHHHHHHHSCTTCEEEECS
T ss_pred EEEECCC-----C----HHHHHHHHHHHhcCCEEEEEe
Confidence 9886532 2 246788889999999988754
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.42 E-value=0.13 Score=47.95 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=64.9
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC------CCCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPY------RSDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~------~~~~fD~V~~~~~ 188 (377)
.+.+|.+||-+|+|. |.++. ...+++|+++|.++...+.+++.+..... |..+..+ ..+.+|+|+....
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~~~g~~d~vid~~g 241 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAV-NARDTDPAAWLQKEIGGAHGVLVTAV 241 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEE-eCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence 567899999999875 65432 24678999999999999999988765443 3322111 1136888876532
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. ...++.+.+.|+|||.+++.-
T Consensus 242 -----~----~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 242 -----S----PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp -----C----HHHHHHHHHHEEEEEEEEECS
T ss_pred -----C----HHHHHHHHHHhccCCEEEEeC
Confidence 2 357888999999999988764
No 313
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.12 E-value=0.085 Score=49.77 Aligned_cols=52 Identities=19% Similarity=0.087 Sum_probs=42.3
Q ss_pred CCCEEEEECCccCccccc----CCCceEEEEeCCHHHHHHHHHc----CCeEEEeeCCCC
Q 017080 122 SGSLVLDAGCGNGKYLGL----NPDCFFVGCDISPSLIKICVDR----GHEVLVADAVNL 173 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~----~~~~~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~ 173 (377)
++..|||||.|.|.++.. ....+|+++++++.++...++. +++++.+|+..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 358999999999998754 2345899999999998887763 688999999654
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.04 E-value=0.11 Score=48.87 Aligned_cols=92 Identities=14% Similarity=0.187 Sum_probs=64.0
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCC-----CC-----CCCCCceeE
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAV-----NL-----PYRSDFGDA 182 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~-----~~-----~~~~~~fD~ 182 (377)
..+.+|.+||-+|+|. |.++. ...++ +|+++|.++...+.+++.+..... |.. ++ ....+.+|+
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL-QISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE-ECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE-cCcccccchHHHHHHHHhCCCCCE
Confidence 3578899999999875 65532 24567 899999999999999987765332 322 10 000146899
Q ss_pred EEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 183 AISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 183 V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
|+-.. .. ...+....+.|+|||.+++.-
T Consensus 246 vid~~-----g~----~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 246 TIECT-----GA----EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp EEECS-----CC----HHHHHHHHHHSCTTCEEEECS
T ss_pred EEECC-----CC----hHHHHHHHHHhcCCCEEEEEe
Confidence 88643 22 346788899999999988754
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.98 E-value=0.21 Score=46.84 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=65.5
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEE
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAI 184 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~ 184 (377)
..+.+|.+||=+|+|. |.++. ...++ +|+++|.++..++.+++.+..... |..+.. .....+|+|+
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~v~~~t~g~g~D~v~ 240 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDII-NYKNGDIVEQILKATDGKGVDKVV 240 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEE-CGGGSCHHHHHHHHTTTCCEEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEE-cCCCcCHHHHHHHHcCCCCCCEEE
Confidence 4578899999999876 55432 35677 899999999999999988765433 222111 1234699998
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
-... . ...+..+.+.|+|||.+++.-.
T Consensus 241 d~~g-----~----~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 241 IAGG-----D----VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp ECSS-----C----TTHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC-----C----hHHHHHHHHHHhcCCEEEEecc
Confidence 6432 2 2467888999999999887643
No 316
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.96 E-value=0.27 Score=39.42 Aligned_cols=90 Identities=18% Similarity=0.186 Sum_probs=63.0
Q ss_pred CEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----CCCCceeEEEeccchhhcCCh
Q 017080 124 SLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.+|+=+|+|. |..+. . ..+..|+++|.++..++.+++.++.++.+|..+.. ..-..+|+|++. ++++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~-----~~~~ 82 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILT-----IPNG 82 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEEC-----CSCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEE-----CCCh
Confidence 5799999987 65432 1 46789999999999999998888999999987632 123467888764 3443
Q ss_pred HHHHHHHHHHHHccccCcEEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+ -...+-...+.+.|+..++...
T Consensus 83 ~-~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 83 Y-EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp H-HHHHHHHHHHHHCSSSEEEEEE
T ss_pred H-HHHHHHHHHHHHCCCCeEEEEE
Confidence 2 2233445667778888766544
No 317
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.88 E-value=0.28 Score=45.63 Aligned_cols=91 Identities=18% Similarity=0.217 Sum_probs=63.6
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCC------CCceeEEEeccc
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYR------SDFGDAAISIAV 188 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~------~~~fD~V~~~~~ 188 (377)
.+.++.+||-+|+|. |..+. ...+++|+++|.++..++.+++.+.... .|..+..+. .+.+|+|+....
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 577899999999964 54432 2457899999999999999988766543 243321110 046899887532
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. ...++.+.+.|++||.+++.-
T Consensus 240 -----~----~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 240 -----S----KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp -----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred -----C----HHHHHHHHHHhhcCCEEEEec
Confidence 2 256788889999999987754
No 318
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.81 E-value=0.059 Score=49.78 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=59.6
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
.+.+|.+||=+|+|. |.++. ...+++|++++ |+...+.+++.+......|.+.+ .+.+|+|+-.-. .
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v---~~g~Dvv~d~~g-----~ 209 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQV---TQKYFAIFDAVN-----S 209 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGC---CSCEEEEECC--------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHh---CCCccEEEECCC-----c
Confidence 467899999999964 65432 24577999999 99999999888766554332222 567999886432 1
Q ss_pred hHHHHHHHHHHHHccccCcEEEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
..+....+.|+|||.++..
T Consensus 210 -----~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 -----QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ---------TTGGGEEEEEEEEEE
T ss_pred -----hhHHHHHHHhcCCCEEEEE
Confidence 1235678999999998877
No 319
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.56 E-value=0.17 Score=47.21 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=65.6
Q ss_pred CCCCCCEEEEECCcc-Ccccc----cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC------CCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG----LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP------YRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~----~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~------~~~~~fD~V~~~~ 187 (377)
.+.++.+||-+|+|. |.++. ...+.+|+++|.++...+.+++.+.......-.++. .....+|+|+-.-
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECC
Confidence 567899999999876 55432 234779999999999999999887655432211110 0123689988743
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
.. ...++.+.+.|+|||.+++.-.
T Consensus 248 -----G~----~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 248 -----GA----QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp -----CC----HHHHHHHHHHEEEEEEEEECSC
T ss_pred -----CC----HHHHHHHHHHHhcCCEEEEECC
Confidence 23 3578889999999999887643
No 320
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.36 E-value=0.19 Score=46.54 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCC-CC-------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVN-LP-------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~-~~-------~~~~~fD~V~~ 185 (377)
.+.++.+||-.|++ .|..+. ...+++|+++|.++..++.+++.+.... .|..+ .. ...+.+|+++.
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~ 220 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFD 220 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEE-EecCCHHHHHHHHHHHhCCCCeEEEE
Confidence 46788999999983 455432 2467899999999999888866655433 34433 11 11257999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...- ..++...+.|+|||.+++.-
T Consensus 221 ~~g~----------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 221 NVGG----------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp SSCH----------HHHHHHHTTEEEEEEEEECC
T ss_pred CCCh----------HHHHHHHHHHhcCCEEEEEe
Confidence 6431 24778889999999987753
No 321
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.34 E-value=0.13 Score=48.47 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=64.2
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~~ 186 (377)
.+.+|.+||-+|+|. |.++. ...+++|+++|.++..++.+++.+...... -.... .....+|+|+..
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEEC
Confidence 567899999999876 55432 256789999999999999998887654432 21111 113379999875
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
.. . ..+....+.|+|||.+++.-.
T Consensus 265 ~g-----~-----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 265 AG-----G-----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TT-----S-----SCHHHHHHHEEEEEEEEEECC
T ss_pred CC-----h-----HHHHHHHHHhhcCCEEEEEec
Confidence 43 1 246677889999999888754
No 322
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.00 E-value=0.35 Score=45.53 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=62.1
Q ss_pred CCCEEEEEC-Ccc-Ccccc---c-CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC-----CCCCCceeEEEeccchh
Q 017080 122 SGSLVLDAG-CGN-GKYLG---L-NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL-----PYRSDFGDAAISIAVLH 190 (377)
Q Consensus 122 ~~~~vLDiG-cG~-G~~~~---~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~-----~~~~~~fD~V~~~~~l~ 190 (377)
+|.+||=+| +|. |.++. . ..+++|+++|.++..++.+++.+.......-.++ ....+.+|+|+....
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g-- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH-- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCC--
Confidence 788999998 554 66542 2 3678999999999999999888765443221111 122457999887432
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
-...+..+.+.|+|||.+++.
T Consensus 249 -------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 -------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -------HHHHHHHHHHHSCTTCEEEEC
T ss_pred -------chhhHHHHHHHhcCCCEEEEE
Confidence 235788899999999998876
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.94 E-value=0.14 Score=48.47 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC----CCCCCceeEEEeccchh
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL----PYRSDFGDAAISIAVLH 190 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~----~~~~~~fD~V~~~~~l~ 190 (377)
.+.+|.+||-+|+|. |.++. ...+++|+++|.|+..++.+++.+..... |..+. .. .+.+|+|+....-
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~-~~g~Dvvid~~g~- 267 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVV-NSRNADEMAAH-LKSFDFILNTVAA- 267 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEE-ETTCHHHHHTT-TTCEEEEEECCSS-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEe-ccccHHHHHHh-hcCCCEEEECCCC-
Confidence 577899999999975 55432 24678899999999999999887655432 22210 11 1579999865321
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...++...+.|+|+|.+++.-
T Consensus 268 --------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 268 --------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp --------CCCHHHHHTTEEEEEEEEECC
T ss_pred --------HHHHHHHHHHhccCCEEEEec
Confidence 124667789999999987753
No 324
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.68 E-value=2.7 Score=39.07 Aligned_cols=149 Identities=14% Similarity=0.120 Sum_probs=89.6
Q ss_pred HHHhCCCCCCEEEEECCccCccc-cc----CCCceEEEEeCCHHHHHHHH-----------------------------H
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYL-GL----NPDCFFVGCDISPSLIKICV-----------------------------D 160 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~-~~----~~~~~v~gvD~s~~~~~~a~-----------------------------~ 160 (377)
.++..-++...|+-+|||.=... +. .++..++=||.-..+-...+ .
T Consensus 83 ~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s 162 (334)
T 3iei_A 83 AFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDS 162 (334)
T ss_dssp HHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEEC
T ss_pred HHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCC
Confidence 34443334679999999985432 21 24678999998443322111 0
Q ss_pred cCCeEEEeeCCCC----------CCCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchhhh
Q 017080 161 RGHEVLVADAVNL----------PYRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKSLV 230 (377)
Q Consensus 161 ~~~~~~~~d~~~~----------~~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~ 230 (377)
.+..++.+|+.+. .+..+.-=++++-+++.+++.++ ..++|+.+.+... +|.+++.+...... .
T Consensus 163 ~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~-~~~ll~~ia~~f~-~~~~i~yE~i~p~d--~-- 236 (334)
T 3iei_A 163 KRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQ-SANLLKWAANSFE-RAMFINYEQVNMGD--R-- 236 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH-HHHHHHHHHHHCS-SEEEEEEEECCTTS--H--
T ss_pred CceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHH-HHHHHHHHHHhCC-CceEEEEeccCCCC--H--
Confidence 1345677888662 13334456888889999998755 7889998888774 56666666543221 1
Q ss_pred hccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 231 TKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 231 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
....+.........+......+.++++..+.+.++||..
T Consensus 237 -----fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~ 275 (334)
T 3iei_A 237 -----FGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWET 275 (334)
T ss_dssp -----HHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSE
T ss_pred -----HHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCc
Confidence 112222222222223233345678888999999999965
No 325
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.31 E-value=0.49 Score=39.55 Aligned_cols=91 Identities=13% Similarity=0.090 Sum_probs=61.3
Q ss_pred CCEEEEECCcc-Ccccc-c--CC-CceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----C-CCCceeEEEeccchhhc
Q 017080 123 GSLVLDAGCGN-GKYLG-L--NP-DCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----Y-RSDFGDAAISIAVLHHL 192 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~-~--~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~-~~~~fD~V~~~~~l~h~ 192 (377)
+.+|+=+|+|. |..+. . .. +.+|+++|.++..++.+++.++.++.+|..+.. . .-..+|+|+...
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~----- 113 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM----- 113 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC-----
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC-----
Confidence 56899999987 65432 1 34 789999999999998888888888888876521 1 234679888742
Q ss_pred CChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 193 STESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 193 ~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
++.+ ....+-.+.+.+.|++.++...
T Consensus 114 ~~~~-~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 114 PHHQ-GNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SSHH-HHHHHHHHHHHTTCCSEEEEEE
T ss_pred CChH-HHHHHHHHHHHHCCCCEEEEEE
Confidence 3322 2333444566667777777654
No 326
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.03 E-value=0.2 Score=46.88 Aligned_cols=91 Identities=20% Similarity=0.193 Sum_probs=63.3
Q ss_pred CCCCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCC-CCC-------CCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVN-LPY-------RSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~-~~~-------~~~~fD~V~~ 185 (377)
.+.++.+||-+|++ .|..+. ...+++|+++|.++...+.+++.+.... .|..+ ..+ ..+.+|+|+.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~ 244 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVF-IDFTKEKDIVGAVLKATDGGAHGVIN 244 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEE-EETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceE-EecCccHhHHHHHHHHhCCCCCEEEE
Confidence 46789999999983 455432 2457899999999988888887765533 25432 110 1126899887
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
... . ...++.+.+.|++||++++..
T Consensus 245 ~~g-----~----~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 245 VSV-----S----EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp CSS-----C----HHHHHHHTTSEEEEEEEEECC
T ss_pred CCC-----c----HHHHHHHHHHHhcCCEEEEEe
Confidence 643 2 357888999999999987754
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.00 E-value=0.34 Score=45.77 Aligned_cols=91 Identities=13% Similarity=0.151 Sum_probs=63.3
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCC----CC-----CCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVN----LP-----YRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~----~~-----~~~~~fD~V~ 184 (377)
.+.+|.+||-+|+|. |.++. ...++ +|+++|.++..++.+++.+..... |..+ +. ...+.+|+|+
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~~~~g~D~vi 267 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV-NPNDHSEPISQVLSKMTNGGVDFSL 267 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEE-CGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEE-eccccchhHHHHHHHHhCCCCCEEE
Confidence 567899999999865 55432 24567 899999999999999887765432 3221 10 1123689988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccC-cEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKG-SLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~ 219 (377)
.... . ...++.+.+.|+|| |.+++.-
T Consensus 268 d~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 268 ECVG-----N----VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp ECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred ECCC-----C----HHHHHHHHHHhhcCCcEEEEEc
Confidence 6432 2 35678899999999 9987754
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.96 E-value=0.27 Score=46.40 Aligned_cols=91 Identities=12% Similarity=0.121 Sum_probs=63.5
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCC----C-----CCCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVN----L-----PYRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~----~-----~~~~~~fD~V~ 184 (377)
.+.+|.+||-+|+|. |.++. ...++ +|+++|.++...+.+++.+..... |..+ + ....+.+|+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL-NPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEE-ecccccchHHHHHHHHhCCCCCEEE
Confidence 567899999999875 55432 24566 899999999999999887765432 2221 1 01124789988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccC-cEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKG-SLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~ 219 (377)
-.- .. ...++...+.|+|+ |.+++.-
T Consensus 267 d~~-----g~----~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 267 ECA-----GR----IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp ECS-----CC----HHHHHHHHHTBCTTTCEEEECC
T ss_pred ECC-----CC----HHHHHHHHHHHhcCCCEEEEEc
Confidence 643 22 35678899999999 9987754
No 329
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.95 E-value=0.27 Score=45.96 Aligned_cols=92 Identities=16% Similarity=0.219 Sum_probs=63.6
Q ss_pred hCCCCCCEEEEECCccC--cccc---cCC-CceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-------CCC-CceeEE
Q 017080 118 NSLPSGSLVLDAGCGNG--KYLG---LNP-DCFFVGCDISPSLIKICVDRGHEVLVADAVNLP-------YRS-DFGDAA 183 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G--~~~~---~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-------~~~-~~fD~V 183 (377)
..+.++.+||-+|+|.| ..+. ... +++|+++|.++...+.+++.+..... |..+.. ... +.+|+|
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVI-NASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEe-cCCCccHHHHHHHHhcCCCceEE
Confidence 45778999999999854 4321 134 78999999999999888776654332 333211 112 579998
Q ss_pred EeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 184 ISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+.... . ...++.+.+.|+|+|.+++.-
T Consensus 245 i~~~g-----~----~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 245 IDLNN-----S----EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EESCC-----C----HHHHTTGGGGEEEEEEEEECC
T ss_pred EECCC-----C----HHHHHHHHHHHhcCCEEEEEC
Confidence 87543 2 246778889999999987754
No 330
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.74 E-value=0.44 Score=44.45 Aligned_cols=88 Identities=11% Similarity=0.131 Sum_probs=60.5
Q ss_pred CCCEEEEEC-Ccc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC-----CCCCCceeEEEeccchhh
Q 017080 122 SGSLVLDAG-CGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL-----PYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 122 ~~~~vLDiG-cG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~-----~~~~~~fD~V~~~~~l~h 191 (377)
+|.+||=+| +|. |.++. ...+++|+++|.++..++.+++.+.......-.++ ....+.+|+|+....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g--- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFN--- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSC---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCC---
Confidence 789999994 544 55432 25678999999999999999887665443221111 012346999887422
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
-...+..+.+.|+|+|.++..
T Consensus 227 ------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 227 ------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ------HHHHHHHHHHHEEEEEEEEES
T ss_pred ------chHHHHHHHHHhccCCEEEEE
Confidence 245678889999999998654
No 331
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.73 E-value=0.58 Score=43.84 Aligned_cols=89 Identities=12% Similarity=0.031 Sum_probs=63.1
Q ss_pred CCCC------CEEEEECCcc-Cccc----c-cCCCce-EEEEeCCHH---HHHHHHHcCCeEEEeeCCCCCCC-----CC
Q 017080 120 LPSG------SLVLDAGCGN-GKYL----G-LNPDCF-FVGCDISPS---LIKICVDRGHEVLVADAVNLPYR-----SD 178 (377)
Q Consensus 120 ~~~~------~~vLDiGcG~-G~~~----~-~~~~~~-v~gvD~s~~---~~~~a~~~~~~~~~~d~~~~~~~-----~~ 178 (377)
+.+| .+||-+|+|. |.++ . ...+++ |+++|.++. ..+.+++.+.... |..+..+. .+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~g 241 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYE 241 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSC
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCC
Confidence 4577 8999999865 5554 1 345676 999999998 8899988877655 54432211 23
Q ss_pred ceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 179 FGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 179 ~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+|+|+-.. .. ...++.+.+.|+|||.+++.-
T Consensus 242 g~Dvvid~~-----g~----~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 242 QMDFIYEAT-----GF----PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CEEEEEECS-----CC----HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECC-----CC----hHHHHHHHHHHhcCCEEEEEe
Confidence 689987643 22 246788899999999988764
No 332
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.71 E-value=0.36 Score=45.56 Aligned_cols=91 Identities=13% Similarity=0.164 Sum_probs=63.2
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCC----CC-----CCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVN----LP-----YRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~----~~-----~~~~~fD~V~ 184 (377)
.+.+|.+||-+|+|. |.++. ...++ +|+++|.++...+.+++.+..... |..+ +. ...+.+|+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-NPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEe-cccccchhHHHHHHHHhCCCCcEEE
Confidence 567899999999875 55432 24567 899999999999999887765432 2221 10 1124689988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccC-cEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKG-SLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~ 219 (377)
... .. ...++...+.|++| |.+++.-
T Consensus 267 d~~-----g~----~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 267 EVI-----GR----LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp ECS-----CC----HHHHHHHHHHBCTTTCEEEECS
T ss_pred ECC-----CC----HHHHHHHHHHhhcCCcEEEEec
Confidence 653 22 35678889999999 9987753
No 333
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.69 E-value=0.29 Score=45.66 Aligned_cols=90 Identities=11% Similarity=0.025 Sum_probs=62.0
Q ss_pred CCCCCCEEEEECC--ccCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGC--GNGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGc--G~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.++.+||-+|+ |.|..+. ...+++|+++|.++..++.+++.+.... .|..+.. .....+|+|+.
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~ 241 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTGGKGADKVVD 241 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEE
Confidence 4678899999998 3455432 2457899999999999998887665433 3443321 11247999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
... . ..++.+.+.|+++|.+++..
T Consensus 242 ~~g-~---------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 242 HTG-A---------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp SSC-S---------SSHHHHHHHEEEEEEEEESS
T ss_pred CCC-H---------HHHHHHHHhhccCCEEEEEe
Confidence 654 1 24667788999999887653
No 334
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.66 E-value=0.15 Score=47.57 Aligned_cols=90 Identities=14% Similarity=0.192 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCcc-Ccccc---c--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCC---C--CCC-CCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---L--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVN---L--PYR-SDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~---~--~~~-~~~fD~V~~~ 186 (377)
.+ +|.+||-+|+|. |.++. . +|+++|+++|.|+...+.+++.+..... |..+ + ... ...+|+|+..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~g~g~D~vid~ 245 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS-EMKDAESLINKLTDGLGASIAIDL 245 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEE-CHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEe-ccccchHHHHHhhcCCCccEEEEC
Confidence 56 899999999964 55431 1 3488999999999999999887654432 1111 0 011 2369999875
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.. . ...++.+.+.|+|||.+++.-
T Consensus 246 ~g-----~----~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 246 VG-----T----EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp SC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred CC-----C----hHHHHHHHHHhhcCCEEEEeC
Confidence 32 2 246788899999999987754
No 335
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.64 E-value=0.32 Score=45.69 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=62.1
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC-C----CCCCceeEEEeccc
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL-P----YRSDFGDAAISIAV 188 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~-~----~~~~~fD~V~~~~~ 188 (377)
..+.+|.+||-+|+|. |.++. ...+++|+++|.|+..++.+++.+..... |..+. . .. +.+|+|+....
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEE-cCcCchHHHHHhh-cCCCEEEECCC
Confidence 3577899999999865 55432 24577899999999999998887655432 22211 1 11 47999987643
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
-. . ...++.+.+.|+|||.+++.-
T Consensus 253 ~~--~-----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 253 SL--T-----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CS--T-----TCCTTTGGGGEEEEEEEEECC
T ss_pred CC--c-----HHHHHHHHHHhcCCCEEEEec
Confidence 20 0 123455778999999987653
No 336
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.47 E-value=0.39 Score=45.35 Aligned_cols=92 Identities=14% Similarity=0.077 Sum_probs=63.7
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCC----CC-----CCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVN----LP-----YRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~----~~-----~~~~~fD~V~ 184 (377)
.+.+|.+||-+|+|. |.++. ...++ +|+++|.++...+.+++.+..... |..+ +. ...+.+|+|+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-NPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE-CGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEE-ccccccchHHHHHHHHhCCCccEEE
Confidence 567899999999875 55432 24567 899999999999999887765433 2221 10 1123689988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccC-cEEEEEEc
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKG-SLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 220 (377)
-.- .. ...++.+.+.|++| |.+++.-.
T Consensus 271 d~~-----G~----~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 271 DCA-----GT----AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ESS-----CC----HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECC-----CC----HHHHHHHHHHhhcCCCEEEEECC
Confidence 643 22 35688899999999 99887543
No 337
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=90.29 E-value=0.26 Score=46.71 Aligned_cols=92 Identities=17% Similarity=0.197 Sum_probs=64.6
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCC--CCC-------CCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAV--NLP-------YRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~--~~~-------~~~~~fD~V~ 184 (377)
.+.+|.+||=+|+|. |.++. ...++ +|+++|.++..++.+++.+..... |.. +.. ...+.+|+|+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~i~~~~~gg~D~vi 268 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFV-NPKDHDKPIQEVIVDLTDGGVDYSF 268 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEE-CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEE-ccccCchhHHHHHHHhcCCCCCEEE
Confidence 567899999999875 55432 24566 899999999999999988765433 222 111 1234799988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccC-cEEEEEEc
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKG-SLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 220 (377)
-.. .. ...+....+.|+|| |.+++.-.
T Consensus 269 d~~-----g~----~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 269 ECI-----GN----VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp ECS-----CC----HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECC-----CC----HHHHHHHHHHhhccCCEEEEEcc
Confidence 753 22 35788899999997 99887643
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.27 E-value=0.94 Score=43.20 Aligned_cols=93 Identities=12% Similarity=0.063 Sum_probs=60.9
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.+|.+||=+|+|. |.++. ...++ +|+++|.++.-++.+++.+..... |..+.. .....+|+|+-
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~i~~~t~g~g~D~vid 288 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVI-DPTKENFVEAVLDYTNGLGAKLFLE 288 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE-CTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE-cCCCCCHHHHHHHHhCCCCCCEEEE
Confidence 467899999999865 55432 24577 999999999999999988765443 222211 11236999886
Q ss_pred ccchhhcCChHHHHHHHHHHH----HccccCcEEEEEEc
Q 017080 186 IAVLHHLSTESRRKKAIEELV----RVVKKGSLVLITVW 220 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~----r~LkpgG~l~i~~~ 220 (377)
.- .. ....+..+. +.+++||.+++.-.
T Consensus 289 ~~-----g~---~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 289 AT-----GV---PQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CS-----SC---HHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CC-----CC---cHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 43 22 222344444 44599999888643
No 339
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.15 E-value=0.45 Score=44.07 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.+|.+||-+|++ .|..+. ...+++|+++|.++..++.+++.+..... |..+.. .....+|+|+.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~-~~~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLI-NASKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEE-eCCCchHHHHHHHHhCCCCceEEEE
Confidence 56789999999943 355432 25678999999999999999887655432 322211 11346999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...- ..++.+.+.|+|||.+++.-
T Consensus 224 ~~g~----------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 224 SVGK----------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CCGG----------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCh----------HHHHHHHHHhccCCEEEEEc
Confidence 6432 24667788999999988764
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.03 E-value=0.35 Score=45.61 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=63.1
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCC----C-----CCCCCceeEEE
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVN----L-----PYRSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~----~-----~~~~~~fD~V~ 184 (377)
.+.+|.+||-+|+|. |.++. ...++ +|+++|.|+...+.+++.+..... |..+ + ....+.+|+|+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~v~~~~~~g~D~vi 265 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI-NPQDFSKPIQEVLIEMTDGGVDYSF 265 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe-ccccccccHHHHHHHHhCCCCCEEE
Confidence 567899999999875 55432 24566 899999999999999887765432 2221 1 01124689988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccC-cEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKG-SLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~Lkpg-G~l~i~~ 219 (377)
.... . ...++.+.+.|+|+ |.+++.-
T Consensus 266 d~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 266 ECIG-----N----VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp ECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred ECCC-----c----HHHHHHHHHhhccCCcEEEEEe
Confidence 6532 2 35678899999999 9987754
No 341
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.98 E-value=0.37 Score=45.36 Aligned_cols=85 Identities=9% Similarity=-0.000 Sum_probs=59.6
Q ss_pred CCEEEEECCcc-Ccccc---cCCCceEEEEeCCH---HHHHHHHHcCCeEEEeeCCCCCCC------CCceeEEEeccch
Q 017080 123 GSLVLDAGCGN-GKYLG---LNPDCFFVGCDISP---SLIKICVDRGHEVLVADAVNLPYR------SDFGDAAISIAVL 189 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~---~~~~~a~~~~~~~~~~d~~~~~~~------~~~fD~V~~~~~l 189 (377)
|.+||-+|+|. |.++. ...+++|+++|.++ ...+.+++.+...+ | .+ .+. .+.+|+|+.....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECCCC
Confidence 89999999854 44432 24567999999998 77888887777655 4 43 221 1469999875432
Q ss_pred hhcCChHHHHHHH-HHHHHccccCcEEEEEEc
Q 017080 190 HHLSTESRRKKAI-EELVRVVKKGSLVLITVW 220 (377)
Q Consensus 190 ~h~~~~~~~~~~l-~~~~r~LkpgG~l~i~~~ 220 (377)
...+ +.+.+.|+|+|.+++...
T Consensus 257 ---------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 257 ---------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp ---------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred ---------hHHHHHHHHHHHhcCCEEEEEec
Confidence 1245 888999999999877643
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.97 E-value=0.49 Score=44.32 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.++.+||-.|++ .|..+. ...+++|+++|.++..++.+++.+.... .|..+.. .....+|+|+.
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~ 245 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIE 245 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEE-EeCCCchHHHHHHHHcCCCCcEEEEE
Confidence 56789999999973 355432 2467899999999999988887765533 2433321 11236999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...- ..+....+.|+|||.+++.-
T Consensus 246 ~~G~----------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 246 MLAN----------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp SCHH----------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCh----------HHHHHHHHhccCCCEEEEEe
Confidence 6431 24677889999999987764
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.86 E-value=0.43 Score=44.22 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=63.0
Q ss_pred hCCCCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHH-HHcCCeEEEeeCCCCC-------CCCCceeEEE
Q 017080 118 NSLPSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKIC-VDRGHEVLVADAVNLP-------YRSDFGDAAI 184 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a-~~~~~~~~~~d~~~~~-------~~~~~fD~V~ 184 (377)
..+.+|.+||-+|++ .|..+. ...+++|+++|.++...+.+ ++.+..... |..+.. ...+.+|+|+
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAI-DYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEE-ETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEE-ECCCHHHHHHHHHhcCCCceEEE
Confidence 357789999999983 355432 25678999999999999988 665654332 333211 1134699988
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
....- ..+..+.+.|+|||.+++.-
T Consensus 224 ~~~g~----------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 224 DNVGG----------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp ESSCH----------HHHHHHHTTEEEEEEEEECC
T ss_pred ECCCc----------chHHHHHHHHhhCCEEEEEe
Confidence 75431 36788889999999988764
No 344
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=89.77 E-value=0.12 Score=47.49 Aligned_cols=58 Identities=19% Similarity=0.249 Sum_probs=39.4
Q ss_pred CeEEEeeCCC-CC-CCCCceeEEEeccchhhcCC-------------h----HHHHHHHHHHHHccccCcEEEEEEc
Q 017080 163 HEVLVADAVN-LP-YRSDFGDAAISIAVLHHLST-------------E----SRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 163 ~~~~~~d~~~-~~-~~~~~fD~V~~~~~l~h~~~-------------~----~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++++++|+.+ +. +++++||+|++.=-.....+ . .....+++++.++|||||.+++...
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 5678888876 32 56789999999633221100 0 0135678899999999999988764
No 345
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.62 E-value=0.36 Score=44.93 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=61.7
Q ss_pred CCCCCCEEEEECCcc--Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGN--GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~--G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.+|.+||-+|+|. |..+. ...+++|+++|.++..++.+++.+..... |..+.. .....+|+|+.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~-~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVI-DTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEE-eCCcccHHHHHHHHhCCCCCcEEEE
Confidence 567899999999985 44432 24578999999999999999887665433 332211 12347999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
...-. .+.+..+.|+|||.+++.-.
T Consensus 220 ~~g~~----------~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 220 SIGGP----------DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SSCHH----------HHHHHHHTEEEEEEEEECCC
T ss_pred CCCCh----------hHHHHHHHhcCCCEEEEEee
Confidence 54321 22334589999999887643
No 346
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=89.61 E-value=0.45 Score=44.19 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=61.9
Q ss_pred CCCCCCEEEEECC--ccCcccc---cCCCceEEEEeCCHHHHHHHH-HcCCeEEEeeCCCC-CC-------CCCceeEEE
Q 017080 119 SLPSGSLVLDAGC--GNGKYLG---LNPDCFFVGCDISPSLIKICV-DRGHEVLVADAVNL-PY-------RSDFGDAAI 184 (377)
Q Consensus 119 ~~~~~~~vLDiGc--G~G~~~~---~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~d~~~~-~~-------~~~~fD~V~ 184 (377)
.+.+|.+||-+|+ |.|..+. ...+++|+++|.++..++.++ +.+.... .|..+. .+ ..+.+|+|+
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi 230 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRCFPNGIDIYF 230 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHHhCCCCcEEE
Confidence 4678999999997 3465432 246789999999999999887 4555433 244321 11 124699998
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.... - ..++...+.|+|||.+++.-
T Consensus 231 ~~~g---------~-~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 231 ENVG---------G-KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp ESSC---------H-HHHHHHHTTEEEEEEEEECC
T ss_pred ECCC---------H-HHHHHHHHHHhcCCEEEEEc
Confidence 7542 1 36788889999999988753
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.32 E-value=0.37 Score=44.53 Aligned_cols=91 Identities=13% Similarity=0.006 Sum_probs=62.9
Q ss_pred CCCCCCEEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.+|.+||-+|+ | .|..+. ...+++|+++|.++..++.+++.+..... |..+.. .....+|+|+.
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETI-DYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCCCceEEEE
Confidence 4678999999993 3 365432 24577999999999999999887654332 332211 12347999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
...- ..+....+.|+|||.+++.-.
T Consensus 216 ~~g~----------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 216 GVGQ----------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp SSCG----------GGHHHHHTTEEEEEEEEECCC
T ss_pred CCCh----------HHHHHHHHHhcCCCEEEEEec
Confidence 5432 246678899999999888643
No 348
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=89.08 E-value=1.5 Score=40.63 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=62.9
Q ss_pred hCCCCCCEEEEECCccCc-cc----ccCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEE
Q 017080 118 NSLPSGSLVLDAGCGNGK-YL----GLNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAI 184 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~G~-~~----~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~ 184 (377)
..+.+|.+||=+|+|.+. ++ ....+.+|+++|.++.-++.+++.+..... |..+.. .....+|.++
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i-~~~~~~~~~~v~~~t~g~g~d~~~ 237 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTI-NSGDVNPVDEIKKITGGLGVQSAI 237 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEE-EC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEE-eCCCCCHHHHhhhhcCCCCceEEE
Confidence 356789999999998743 22 235678999999999999999888655433 222211 1123466665
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.... . ...+....+.|+++|.+++.-
T Consensus 238 ~~~~-----~----~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 238 VCAV-----A----RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp ECCS-----C----HHHHHHHHHTEEEEEEEEECC
T ss_pred Eecc-----C----cchhheeheeecCCceEEEEe
Confidence 5322 2 467888899999999988764
No 349
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.90 E-value=0.39 Score=45.49 Aligned_cols=90 Identities=14% Similarity=0.138 Sum_probs=62.3
Q ss_pred CCCCCEEEEECCcc-Ccccc---cCCC-ceEEEEeCCHHHHHHHHHcCCeEEEeeCC---C--C-----C-CCCCceeEE
Q 017080 120 LPSGSLVLDAGCGN-GKYLG---LNPD-CFFVGCDISPSLIKICVDRGHEVLVADAV---N--L-----P-YRSDFGDAA 183 (377)
Q Consensus 120 ~~~~~~vLDiGcG~-G~~~~---~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~d~~---~--~-----~-~~~~~fD~V 183 (377)
+.+|.+||-+|+|. |.++. ...+ .+|+++|.|+..++.+++.+..... |.. + + . .....+|+|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL-NRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEE-eccccCcchHHHHHHHHhCCCCCcEE
Confidence 67899999999765 55432 2457 5999999999999999987765432 222 1 0 0 112369999
Q ss_pred EeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 184 ISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+-... . ...++...+.|+|||.+++.-
T Consensus 272 id~~g-----~----~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 272 LEATG-----D----SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp EECSS-----C----TTHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-----C----HHHHHHHHHHHhcCCEEEEEe
Confidence 86532 1 246778889999999987764
No 350
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.76 E-value=0.68 Score=43.13 Aligned_cols=90 Identities=17% Similarity=0.133 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+ +|.+||-+|+|. |.++. ...++ +|+++|.++..++.+++.+..... |..+.. .....+|+|+.
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI-NPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEE-CTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE-CCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 46 889999999964 55432 24577 999999999999999887665332 332211 11236999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
... . ...++.+.+.|+++|.++..-
T Consensus 243 ~~g-----~----~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 243 FSG-----A----PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp CSC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred CCC-----C----HHHHHHHHHHHhcCCEEEEEc
Confidence 532 2 356788899999999987754
No 351
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.67 E-value=1.5 Score=34.69 Aligned_cols=90 Identities=18% Similarity=0.162 Sum_probs=59.2
Q ss_pred CCEEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----CCCCceeEEEeccchhhcCC
Q 017080 123 GSLVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~~ 194 (377)
..+|+=+|+|. |..+ .. ..+.+|+++|.++..++.+++.+..++.+|..+.. ..-..+|+|+... ++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~-----~~ 80 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITG-----SD 80 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECC-----SC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEec-----CC
Confidence 45799999976 5432 21 45789999999999999888888899999987632 1234678887643 23
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+ ....+....+.+. ...++...
T Consensus 81 ~~-~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 81 DE-FNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp HH-HHHHHHHHHHHHC-CCCEEEEE
T ss_pred HH-HHHHHHHHHHHhC-CceEEEEE
Confidence 22 3344445555555 45554443
No 352
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.46 E-value=1 Score=42.27 Aligned_cols=91 Identities=14% Similarity=0.161 Sum_probs=62.7
Q ss_pred hCCCCCCEEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-------CCCCceeEEEe
Q 017080 118 NSLPSGSLVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP-------YRSDFGDAAIS 185 (377)
Q Consensus 118 ~~~~~~~~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-------~~~~~fD~V~~ 185 (377)
..+.+|.+||-+|+ | .|..+. ...+++|+++|.++..++.+++.+..... |..+.. ...+.+|+|+.
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPI-NYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEE-ecCChhHHHHHHHhcCCCCCEEEE
Confidence 35778999999993 3 365432 24578999999999999998887655432 322211 11246899987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
... . ..++.+.+.|+++|.+++.-
T Consensus 238 ~~g-----~-----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 238 SVG-----G-----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CSC-----T-----HHHHHHHHHEEEEEEEEECC
T ss_pred CCC-----H-----HHHHHHHHHHhcCCEEEEEe
Confidence 543 2 36778889999999987754
No 353
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.43 E-value=0.8 Score=44.05 Aligned_cols=92 Identities=21% Similarity=0.260 Sum_probs=67.2
Q ss_pred CCEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----CCCCceeEEEeccchhhcCC
Q 017080 123 GSLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~~ 194 (377)
+.+|+=+|+|. |..+. . ..+..|+++|.++..++.+++.++.++.+|+.+.. ..-...|+|++. +++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~-----~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA-----IDD 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC-----CSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC-----CCC
Confidence 45799999987 55432 1 46789999999999999999889999999998742 223567887774 334
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++ ....+....+.+.|...++....
T Consensus 79 ~~-~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 79 PQ-TNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HH-HHHHHHHHHHHHCTTCEEEEEES
T ss_pred hH-HHHHHHHHHHHhCCCCeEEEEEC
Confidence 33 45666777788889877777543
No 354
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.31 E-value=0.91 Score=42.48 Aligned_cols=94 Identities=19% Similarity=0.182 Sum_probs=63.0
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCce-EEEEeCCHHHHHHHHHcCCeEEEeeCC-----CCC------CCCCcee
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDCF-FVGCDISPSLIKICVDRGHEVLVADAV-----NLP------YRSDFGD 181 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~d~~-----~~~------~~~~~fD 181 (377)
..+.+|.+||=+|+|. |.++. ...+++ |+++|.|+.-.+.+++..-..+..... ++. .....+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCC
Confidence 3578899999999865 55432 256775 999999999999988762122211111 110 1234689
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+|+-.. .. ...+..+.+.|+|||.+++.-.
T Consensus 255 vvid~~-----g~----~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 255 VALECT-----GV----ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EEEECS-----CC----HHHHHHHHHHSCTTCEEEECCC
T ss_pred EEEECC-----CC----hHHHHHHHHHhcCCCEEEEEcc
Confidence 988753 22 3578889999999999887643
No 355
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=88.28 E-value=0.7 Score=43.85 Aligned_cols=69 Identities=14% Similarity=-0.025 Sum_probs=51.6
Q ss_pred CEEEEECCccCcccc--cCCCc-eEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCC--------CCCceeEEEeccchh
Q 017080 124 SLVLDAGCGNGKYLG--LNPDC-FFVGCDISPSLIKICVDR--GHEVLVADAVNLPY--------RSDFGDAAISIAVLH 190 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~--~~~~~-~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~--------~~~~fD~V~~~~~l~ 190 (377)
.++||+-||.|.+.. ...|. .+.++|+++.+++..+.+ +..++.+|+.++.. ....+|+|+..--..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 589999999999753 13345 466999999999988877 56788899987631 346799999865544
Q ss_pred hc
Q 017080 191 HL 192 (377)
Q Consensus 191 h~ 192 (377)
.+
T Consensus 83 ~f 84 (376)
T 3g7u_A 83 GF 84 (376)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.20 E-value=0.73 Score=42.43 Aligned_cols=90 Identities=8% Similarity=-0.019 Sum_probs=61.6
Q ss_pred CCCCCCEEEEECC--ccCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGC--GNGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGc--G~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.++.+||-.|+ |.|..+. ...+++|+++|.++...+.+++.+.... .|..+.. .....+|+++.
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~D~vi~ 215 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYD 215 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EECCCccHHHHHHHHhCCCCceEEEE
Confidence 5678999999994 3355432 2456799999999998888887665433 2433211 11246999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
... . ..++.+.+.|++||.+++.-
T Consensus 216 ~~g-----~-----~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 216 SVG-----R-----DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CSC-----G-----GGHHHHHHTEEEEEEEEECC
T ss_pred CCc-----h-----HHHHHHHHHhcCCCEEEEEe
Confidence 654 1 34677889999999987754
No 357
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.74 E-value=0.26 Score=44.82 Aligned_cols=107 Identities=10% Similarity=-0.020 Sum_probs=73.0
Q ss_pred HHHHHhCCCCCCEEEEECCccCccccc--CCCceEEEEeCCHHHHHHHHHc-----CCeEEEeeCCC-CC---CCCCcee
Q 017080 113 VATFLNSLPSGSLVLDAGCGNGKYLGL--NPDCFFVGCDISPSLIKICVDR-----GHEVLVADAVN-LP---YRSDFGD 181 (377)
Q Consensus 113 ~~~~l~~~~~~~~vLDiGcG~G~~~~~--~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~-~~---~~~~~fD 181 (377)
+...+..+. +..+||+=+|+|.+... .++.+++.+|.++...+..+++ +++++..|... +. -+..+||
T Consensus 83 yf~~l~~~n-~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fd 161 (283)
T 2oo3_A 83 YISVIKQIN-LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRG 161 (283)
T ss_dssp HHHHHHHHS-SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCE
T ss_pred HHHHHHHhc-CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCcc
Confidence 334443333 45799999999997632 4557999999999999988887 46777777644 21 2345799
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHH--ccccCcEEEEEEcCCC
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVR--VVKKGSLVLITVWAVE 223 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r--~LkpgG~l~i~~~~~~ 223 (377)
+|++-=..+.-.+ ..++++.+.+ .+.|+|++++-.+...
T Consensus 162 LVfiDPPYe~k~~---~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 162 LIFIDPSYERKEE---YKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp EEEECCCCCSTTH---HHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred EEEECCCCCCCcH---HHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 9999654442222 5667766665 4568999888766543
No 358
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.60 E-value=0.87 Score=42.35 Aligned_cols=89 Identities=16% Similarity=0.075 Sum_probs=61.4
Q ss_pred CCCCCCEEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC------CCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP------YRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~------~~~~~fD~V~~~~ 187 (377)
.+.+|.+||-+|+ | .|.++. ...+++|+++ .++..++.+++.+...+ .+-.++. .....+|+|+...
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i-~~~~~~~~~~~~~~~~~g~D~vid~~ 224 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPI-DASREPEDYAAEHTAGQGFDLVYDTL 224 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEE-ETTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEe-ccCCCHHHHHHHHhcCCCceEEEECC
Confidence 4678999999994 3 365432 2567899999 89999999988877762 2211111 1124699988753
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. . ..+....+.|+|+|.+++..
T Consensus 225 g-----~-----~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 225 G-----G-----PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp C-----T-----HHHHHHHHHEEEEEEEEESC
T ss_pred C-----c-----HHHHHHHHHHhcCCeEEEEc
Confidence 2 2 36778888999999988753
No 359
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=86.88 E-value=0.54 Score=43.80 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=61.7
Q ss_pred CCCCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC------CCCCceeEEEecc
Q 017080 119 SLPSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP------YRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~------~~~~~fD~V~~~~ 187 (377)
.+.+|.+||-+|++ .|..+. ...+++|++++.++...+.+++.+.......-.++. .....+|+|+...
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 46789999999973 355432 256789999999999999988876554332112211 1123699998754
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.- ..+..+.+.|++||.+++.-
T Consensus 236 g~----------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 236 GG----------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp C------------CHHHHHHTEEEEEEEEEC-
T ss_pred ch----------hHHHHHHHhhcCCCEEEEEE
Confidence 32 24677889999999988764
No 360
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=86.85 E-value=1.2 Score=43.33 Aligned_cols=90 Identities=24% Similarity=0.295 Sum_probs=63.2
Q ss_pred CCCCCCEEEEECC-cc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC------------------
Q 017080 119 SLPSGSLVLDAGC-GN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPY------------------ 175 (377)
Q Consensus 119 ~~~~~~~vLDiGc-G~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~------------------ 175 (377)
.+.+|.+||=+|+ |. |.++. ...++++++++.++.-++.+++.+..... |..+..+
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi-~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAII-DRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEE-ETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEE-ecCcCcccccccccccchHHHHHHH
Confidence 5678999999997 43 55432 25688999999999999999887765433 2222111
Q ss_pred -------CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 176 -------RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 176 -------~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
....+|+|+-... - ..+....+.|+|||.+++.-
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G---------~-~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG---------R-ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC---------H-HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHhCCCCCcEEEEcCC---------c-hhHHHHHHHhhCCcEEEEEe
Confidence 1247999887432 1 46778889999999988754
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.44 E-value=1 Score=42.14 Aligned_cols=90 Identities=10% Similarity=-0.061 Sum_probs=61.1
Q ss_pred CCCCCCEEEEECC--ccCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGC--GNGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGc--G~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.++.+||-.|+ |.|..+. ...+++|+++|.++..++.+++.+.... .|..+.. .....+|+++.
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~ 237 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAG-FNYKKEDFSEATLKFTKGAGVNLILD 237 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCChHHHHHHHHHhcCCCceEEEE
Confidence 4678899999995 3455432 2467899999999999988877665433 2433211 11246999887
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...- ..+....+.|++||.+++.-
T Consensus 238 ~~G~----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 238 CIGG----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SSCG----------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCc----------hHHHHHHHhccCCCEEEEEe
Confidence 6532 13566788999999987764
No 362
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.16 E-value=1.3 Score=40.89 Aligned_cols=90 Identities=9% Similarity=0.034 Sum_probs=61.3
Q ss_pred CCCCCCEEEEECC--ccCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEEe
Q 017080 119 SLPSGSLVLDAGC--GNGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAIS 185 (377)
Q Consensus 119 ~~~~~~~vLDiGc--G~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~~ 185 (377)
.+.++.+||-.|+ |.|..+. ...+++|+++|.++..++.+++.+.... .|..+.. .....+|+|+.
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~i~~~~~~~~~d~vi~ 220 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHT-INYSTQDFAEVVREITGGKGVDVVYD 220 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EECCCHHHHHHHHHHhCCCCCeEEEE
Confidence 4678899999996 3455432 2457899999999988888877665433 2443321 11246999987
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
...- ..++.+.+.|+|||.+++.-
T Consensus 221 ~~g~----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 221 SIGK----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CSCT----------TTHHHHHHTEEEEEEEEECC
T ss_pred CCcH----------HHHHHHHHhhccCCEEEEEe
Confidence 6432 24677889999999987764
No 363
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.12 E-value=3.4 Score=32.12 Aligned_cols=88 Identities=18% Similarity=0.166 Sum_probs=55.9
Q ss_pred CCEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCC----CCCCceeEEEeccchhhcC
Q 017080 123 GSLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLP----YRSDFGDAAISIAVLHHLS 193 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~ 193 (377)
+++|+=+|+|. |..+. . ..+.+|+.+|.++..++...+. ++.++.+|..+.. ..-..+|+|+..- +
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~-----~ 78 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT-----G 78 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC-----S
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee-----C
Confidence 46899999876 54322 1 3567999999999888776654 6777777765421 1124679888763 3
Q ss_pred ChHHHHHHHHHHHHccccCcEEEE
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
+.+ ....+.++.+.++++ .+++
T Consensus 79 ~~~-~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 79 KEE-VNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CHH-HHHHHHHHHHHTTCC-CEEE
T ss_pred Cch-HHHHHHHHHHHcCCC-EEEE
Confidence 322 344556666777775 4444
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.12 E-value=1.3 Score=41.36 Aligned_cols=91 Identities=14% Similarity=0.064 Sum_probs=62.2
Q ss_pred CCCCCCEEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC-------CCCceeEEEec
Q 017080 119 SLPSGSLVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPY-------RSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~-------~~~~fD~V~~~ 186 (377)
.+.++.+||-+|+ | .|..+. ...+++|+++|.++..++.+++.+..... |..+..+ ..+.+|+|+..
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~~~~~~~g~Dvvid~ 242 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGI-NYRSEDFAAVIKAETGQGVDIILDM 242 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE-eCCchHHHHHHHHHhCCCceEEEEC
Confidence 4678999999954 3 355432 25678999999999999999887655432 3322111 13469999876
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
..- ..+....+.|+|||.+++...
T Consensus 243 ~g~----------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 243 IGA----------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp CCG----------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCH----------HHHHHHHHHhccCCEEEEEEe
Confidence 432 246677889999999887643
No 365
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=84.84 E-value=0.99 Score=41.42 Aligned_cols=84 Identities=14% Similarity=0.117 Sum_probs=58.5
Q ss_pred EEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC----CCCCCceeEEEeccchhhcCCh
Q 017080 125 LVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL----PYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 125 ~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~----~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
+||=+|+ | .|.++. ...+++|++++.|+...+.+++.+..... |..+. ....+.+|+|+-.- ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~d~v~d~~-----g~- 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRIL-SRDEFAESRPLEKQLWAGAIDTV-----GD- 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEE-EGGGSSCCCSSCCCCEEEEEESS-----CH-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE-ecCCHHHHHhhcCCCccEEEECC-----Cc-
Confidence 4999997 3 366542 25678999999999999999887655433 22221 12345799877642 22
Q ss_pred HHHHHHHHHHHHccccCcEEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
..+....+.|+|+|.+++.-
T Consensus 222 ----~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 222 ----KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ----HHHHHHHHTEEEEEEEEECC
T ss_pred ----HHHHHHHHHHhcCCEEEEEe
Confidence 37888999999999988764
No 366
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.69 E-value=1.2 Score=36.17 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=57.0
Q ss_pred CCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHH-HcCCeEEEeeCCCCC----CCCCceeEEEeccchhh
Q 017080 121 PSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICV-DRGHEVLVADAVNLP----YRSDFGDAAISIAVLHH 191 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h 191 (377)
.++.+|+=+|+|. |..+. ...+.+|+++|.++..++.++ ..+..++.+|..+.. ..-..+|+|+..-
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~---- 92 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT---- 92 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS----
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe----
Confidence 4678999999987 65432 145679999999998777665 456667777764421 1124578888753
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
++.. ....+..+.+.+.|...++..
T Consensus 93 -~~~~-~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 93 -NDDS-TNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp -SCHH-HHHHHHHHHHHTSCCSEEEEE
T ss_pred -CCcH-HHHHHHHHHHHHCCCCeEEEE
Confidence 3322 344455555555555555444
No 367
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=83.59 E-value=1.1 Score=43.04 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=33.7
Q ss_pred CCCCCEEEEECCccCcccc-----cCC-CceEEEEeCCHHHHHHHHHc
Q 017080 120 LPSGSLVLDAGCGNGKYLG-----LNP-DCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~-----~~~-~~~v~gvD~s~~~~~~a~~~ 161 (377)
++++..|+|||++.|.++. ..+ ..+|+++|++|...+..+++
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n 271 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNV 271 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHH
Confidence 4788999999999999642 233 37999999999988777654
No 368
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.47 E-value=1.8 Score=42.65 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=58.4
Q ss_pred CCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 120 LPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 120 ~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
..+|.+|+=+|+|. |..+. ...+++|+++|+++...+.+.+.+..+ .+..+. -...|+|+..-.-.++-+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~--~~l~e~---l~~aDvVi~atgt~~~i~- 344 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV--VTVEEA---IGDADIVVTATGNKDIIM- 344 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE--CCHHHH---GGGCSEEEECSSSSCSBC-
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE--ecHHHH---HhCCCEEEECCCCHHHHH-
Confidence 56789999999987 65432 245679999999999888888777653 232221 135799988643222221
Q ss_pred HHHHHHHHHHHHccccCcEEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+..+.+||||+++..-
T Consensus 345 -------~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 345 -------LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp -------HHHHHHSCTTCEEEECS
T ss_pred -------HHHHHhcCCCcEEEEeC
Confidence 24667789999876653
No 369
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=83.42 E-value=1.2 Score=45.69 Aligned_cols=95 Identities=13% Similarity=0.217 Sum_probs=57.8
Q ss_pred CCCEEEEECCccCccc----cc-------CCC-----ceEEEEeC---CHHHHHHHHHc---------------------
Q 017080 122 SGSLVLDAGCGNGKYL----GL-------NPD-----CFFVGCDI---SPSLIKICVDR--------------------- 161 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~----~~-------~~~-----~~v~gvD~---s~~~~~~a~~~--------------------- 161 (377)
+.-+|+|+|.|+|... .. .|. .+++.++. +...+..+-+.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4469999999999842 11 122 47999998 55555543211
Q ss_pred -----------CCeEEEeeCCC-CC-CC---CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEE
Q 017080 162 -----------GHEVLVADAVN-LP-YR---SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 162 -----------~~~~~~~d~~~-~~-~~---~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
.+++..+|+.+ ++ +. .+.+|.++.-..-.....+.=-..++..+.++++|||.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 13455666654 22 21 4689999886532221110001588999999999999754
No 370
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.37 E-value=0.55 Score=42.81 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=59.3
Q ss_pred CCCCCEEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCC-CCCCC--CceeEEEeccchhh
Q 017080 120 LPSGSLVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVN-LPYRS--DFGDAAISIAVLHH 191 (377)
Q Consensus 120 ~~~~~~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~-~~~~~--~~fD~V~~~~~l~h 191 (377)
+.+|.+||-+|+ | .|..+. ...+++|+++|.++...+.+++.+..... |..+ ..+.+ +.+|+|+. ..-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~-~~~~~~~~~~~~~~~d~vid-~g~-- 198 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAWGGLDLVLE-VRG-- 198 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHTTSEEEEEE-CSC--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEE-ECCcchhHHHHhcCceEEEE-CCH--
Confidence 678999999998 3 365432 24677999999999988888877655432 3221 11000 56899987 321
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
..++...+.|+|+|.++..-
T Consensus 199 --------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 199 --------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp --------TTHHHHHTTEEEEEEEEEC-
T ss_pred --------HHHHHHHHhhccCCEEEEEe
Confidence 24677889999999987653
No 371
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.37 E-value=2.2 Score=39.05 Aligned_cols=89 Identities=15% Similarity=0.081 Sum_probs=59.0
Q ss_pred hCCCCCCEEEEEC-Ccc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-C--CCCceeEEEeccch
Q 017080 118 NSLPSGSLVLDAG-CGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP-Y--RSDFGDAAISIAVL 189 (377)
Q Consensus 118 ~~~~~~~~vLDiG-cG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-~--~~~~fD~V~~~~~l 189 (377)
..+.+|.+||=+| +|. |.++. ...+++|++++ ++...+.+++.+..... |..+.. + .-..+|+|+-.-.
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~g~D~v~d~~g- 224 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCI-NYHEEDFLLAISTPVDAVIDLVG- 224 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEE-ETTTSCHHHHCCSCEEEEEESSC-
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEE-eCCCcchhhhhccCCCEEEECCC-
Confidence 4678899999997 554 66542 25678999998 55558888887765432 332211 1 1146899887432
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
. ..+....+.|+|||.++..
T Consensus 225 ----~-----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 225 ----G-----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp ----H-----HHHHHHGGGEEEEEEEEEC
T ss_pred ----c-----HHHHHHHHhccCCCEEEEe
Confidence 1 2237889999999998875
No 372
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=82.67 E-value=0.68 Score=42.69 Aligned_cols=90 Identities=13% Similarity=0.112 Sum_probs=59.2
Q ss_pred CCCCCC-EEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC------CCCCCceeEEEec
Q 017080 119 SLPSGS-LVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL------PYRSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~-~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~------~~~~~~fD~V~~~ 186 (377)
.+.++. +||-+|+ | .|.++. ...+++|++++.++..++.+++.+..... |..+. ....+.+|+|+-.
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE-ECC---------CCSCCEEEEEEC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEE-ecCCcHHHHHHHhcCCcccEEEEC
Confidence 456775 8999997 3 365432 24578999999999888888877654332 22111 1223468998765
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.. . ..+....+.|++||.+++.-
T Consensus 224 ~g-----~-----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 224 VG-----G-----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp ST-----T-----TTHHHHHHTEEEEEEEEECS
T ss_pred Cc-----H-----HHHHHHHHhhccCCEEEEEe
Confidence 32 1 24667788999999987753
No 373
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=82.54 E-value=0.48 Score=44.10 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=59.4
Q ss_pred CCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC-------CCCceeEEEec
Q 017080 119 SLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLPY-------RSDFGDAAISI 186 (377)
Q Consensus 119 ~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~-------~~~~fD~V~~~ 186 (377)
.+ +|.+||-+|+|. |.++. ...++ +|+++|.++..++.+++. .... .|..+..+ ..+.+|+|+..
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v-~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRL-VNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEE-ECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhc-cCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 56 889999999854 55432 24577 899999999888777654 3222 23322111 12468998865
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.. . ...++...+.|+|+|.+++.-
T Consensus 239 ~g-----~----~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 239 SG-----N----EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred CC-----C----HHHHHHHHHHHhcCCEEEEEe
Confidence 32 2 356788899999999987754
No 374
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=82.47 E-value=1.3 Score=39.65 Aligned_cols=94 Identities=20% Similarity=0.232 Sum_probs=63.5
Q ss_pred CCEEEEECCccCccc----c-------cCCCceEEEEe-----CCH----------------------HHHHHH---HH-
Q 017080 123 GSLVLDAGCGNGKYL----G-------LNPDCFFVGCD-----ISP----------------------SLIKIC---VD- 160 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~----~-------~~~~~~v~gvD-----~s~----------------------~~~~~a---~~- 160 (377)
+..|+|+|+-.|..+ . ..+..+|+|+| +.+ ..++.. .+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 458999999999832 1 13567999999 432 112111 11
Q ss_pred --------cCCeEEEeeCCC-CC-----CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcC
Q 017080 161 --------RGHEVLVADAVN-LP-----YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 161 --------~~~~~~~~d~~~-~~-----~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
.++.++.+++.+ +| .+..+||+|+.-.-. -.. ....+..+...|+|||++++-++.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~---t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEP---TKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHH---HHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cch---HHHHHHHHHHHhCCCcEEEEcCCC
Confidence 257889998876 32 245679999997642 111 457899999999999999988764
No 375
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.22 E-value=2.4 Score=38.52 Aligned_cols=86 Identities=20% Similarity=0.242 Sum_probs=56.1
Q ss_pred CCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHH
Q 017080 123 GSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRR 198 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~ 198 (377)
..+|.=||+|. |... . ...+.+|+++|.++..++...+.+......+..+. -...|+|+.. +++....
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~---~~~aDvvi~~-----vp~~~~~ 78 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREF---AGVVDALVIL-----VVNAAQV 78 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTT---TTTCSEEEEC-----CSSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHH---HhcCCEEEEE-----CCCHHHH
Confidence 35899999987 5532 2 14567999999999998888877665433444332 2345888875 4553224
Q ss_pred HHHH---HHHHHccccCcEEE
Q 017080 199 KKAI---EELVRVVKKGSLVL 216 (377)
Q Consensus 199 ~~~l---~~~~r~LkpgG~l~ 216 (377)
..++ +++...++||..++
T Consensus 79 ~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 79 RQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp HHHHC--CCCGGGSCTTCEEE
T ss_pred HHHHhChhhHHhhCCCCCEEE
Confidence 4555 56667788876554
No 376
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=82.18 E-value=0.54 Score=43.58 Aligned_cols=58 Identities=5% Similarity=0.043 Sum_probs=39.2
Q ss_pred CeEEEeeCCC-CC-CCCCceeEEEeccchhhc-----CC------hHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 163 HEVLVADAVN-LP-YRSDFGDAAISIAVLHHL-----ST------ESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 163 ~~~~~~d~~~-~~-~~~~~fD~V~~~~~l~h~-----~~------~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
..++.+|... +. +++++||+|++.=-.... .+ .......|+++.++|||||.+++..-
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 4567777754 33 567889999986322111 00 01167889999999999999999764
No 377
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.14 E-value=1.7 Score=40.91 Aligned_cols=90 Identities=14% Similarity=0.025 Sum_probs=58.9
Q ss_pred CCCCCEEEEEC-Ccc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC-----CCCceeEEEeccch
Q 017080 120 LPSGSLVLDAG-CGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPY-----RSDFGDAAISIAVL 189 (377)
Q Consensus 120 ~~~~~~vLDiG-cG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~-----~~~~fD~V~~~~~l 189 (377)
+.+|.+||=+| +|. |.++. ...+++|++++ ++...+.+++.+..... |..+..+ ..+.+|+|+....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~~~~g~D~vid~~g- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVI-DYKSGSVEEQLKSLKPFDFILDNVG- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEE-ETTSSCHHHHHHTSCCBSEEEESSC-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEE-ECCchHHHHHHhhcCCCCEEEECCC-
Confidence 67889999999 343 66532 24578999999 77778888777655433 3322111 1146899886532
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. ....+....+.|++||.++..-
T Consensus 258 ----~---~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 258 ----G---STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ----T---THHHHGGGGBCSSSCCEEEESC
T ss_pred ----C---hhhhhHHHHHhhcCCcEEEEeC
Confidence 2 2245677788999999987753
No 378
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=81.84 E-value=0.55 Score=43.94 Aligned_cols=69 Identities=10% Similarity=0.028 Sum_probs=49.2
Q ss_pred CEEEEECCccCccccc--CCC---ceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCC---CCCCceeEEEeccchhhc
Q 017080 124 SLVLDAGCGNGKYLGL--NPD---CFFVGCDISPSLIKICVDR--GHEVLVADAVNLP---YRSDFGDAAISIAVLHHL 192 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~~--~~~---~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~---~~~~~fD~V~~~~~l~h~ 192 (377)
.+|||+-||.|.+... ..+ ..|.++|+++.+++..+.+ +..++.+|+.++. ++...+|+|+..--...+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 5899999999997521 223 3689999999999999888 4567888998864 112268999987654433
No 379
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=81.76 E-value=7 Score=35.88 Aligned_cols=93 Identities=13% Similarity=0.114 Sum_probs=62.9
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC--------CCCCceeEEE
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLP--------YRSDFGDAAI 184 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~~~~fD~V~ 184 (377)
..+.++.+||=.|+|. |.++. ...++ .++++|.++.-++.+++.+..... |..+.. .....+|+|+
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i-~~~~~~~~~~~~~~~~~~g~d~v~ 234 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTF-NSSEMSAPQMQSVLRELRFNQLIL 234 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHGGGCSSEEEE
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEE-eCCCCCHHHHHHhhcccCCccccc
Confidence 3567899999999976 33321 23444 678999999999999998765443 222211 1124578876
Q ss_pred eccchhhcCChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 185 SIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 185 ~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
... .. ...++...+.|+|||.+++.-.
T Consensus 235 d~~-----G~----~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 235 ETA-----GV----PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp ECS-----CS----HHHHHHHHHHCCTTCEEEECCC
T ss_pred ccc-----cc----cchhhhhhheecCCeEEEEEec
Confidence 643 22 3678888899999999887644
No 380
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=81.75 E-value=1.1 Score=41.31 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=60.1
Q ss_pred CCCCCC-EEEEECC-c-cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEe--eC--CCC-CCCCCceeEEEecc
Q 017080 119 SLPSGS-LVLDAGC-G-NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVA--DA--VNL-PYRSDFGDAAISIA 187 (377)
Q Consensus 119 ~~~~~~-~vLDiGc-G-~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--d~--~~~-~~~~~~fD~V~~~~ 187 (377)
.+.++. +||-+|+ | .|.++. ...+++|++++.++..++.+++.+...... +. ... ....+.+|+|+...
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~ 225 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV 225 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECC
Confidence 456775 8999997 3 365432 245678999999988888888776543321 11 111 12234689987653
Q ss_pred chhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 188 VLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 188 ~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. . ..+....+.|+|||.+++.-
T Consensus 226 g-----~-----~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 226 G-----G-----KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp C-----T-----HHHHHHHTTEEEEEEEEECC
T ss_pred c-----H-----HHHHHHHHhhcCCCEEEEEe
Confidence 2 2 35778889999999988764
No 381
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=80.87 E-value=4.3 Score=37.68 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=62.1
Q ss_pred hCCCCC--CEEEEECCcc--Ccccc---cCCCc-eEEEEeCCHHHHHHHHH-cCCeEEEeeCCCCC-------CCCCcee
Q 017080 118 NSLPSG--SLVLDAGCGN--GKYLG---LNPDC-FFVGCDISPSLIKICVD-RGHEVLVADAVNLP-------YRSDFGD 181 (377)
Q Consensus 118 ~~~~~~--~~vLDiGcG~--G~~~~---~~~~~-~v~gvD~s~~~~~~a~~-~~~~~~~~d~~~~~-------~~~~~fD 181 (377)
..+.++ .+||-.|++. |..+. ...++ +|+++|.++..++.+++ .+.... .|..+.. ...+.+|
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA-INYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEE-EETTTSCHHHHHHHHCTTCEE
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceE-EecCchHHHHHHHHhcCCCCC
Confidence 356788 9999999833 55432 24677 99999999988888876 455432 3443211 1122689
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+++.... ...++...+.|++||.+++.-
T Consensus 233 ~vi~~~G----------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 233 VYFDNVG----------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEESCC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEECCC----------HHHHHHHHHHhccCcEEEEEC
Confidence 9887643 145788889999999988753
No 382
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=80.71 E-value=0.21 Score=47.43 Aligned_cols=93 Identities=17% Similarity=0.106 Sum_probs=57.9
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeC--C-------------------CCCCC
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADA--V-------------------NLPYR 176 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~--~-------------------~~~~~ 176 (377)
++.+|+=+|+|. |..+. ...|++|+++|.++..++.+.+.+.++...+. . .+.-.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 567999999997 55432 24577999999999988888877766653221 0 00001
Q ss_pred CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 177 SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
-...|+|+..-.+..-+. +.-+-+++.+.+|||++++-
T Consensus 263 l~~aDIVI~tv~iPg~~a---p~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPA---PRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HTTCSEEEECCCCTTSCC---CCCBCHHHHHTSCTTCEEEE
T ss_pred HhcCCEEEECCCCCCccc---ceeecHHHHhcCCCCcEEEE
Confidence 156799997532221111 22234678888999875443
No 383
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=79.74 E-value=6.9 Score=34.58 Aligned_cols=69 Identities=14% Similarity=0.098 Sum_probs=49.5
Q ss_pred CEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
++||=.|+|. |..+ . ...+.+|++++.++.........+++++.+|+.++. -..+|+|+.........+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~~~ 78 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPDSGGD 78 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCBTTBC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcccccc
Confidence 5899999632 3322 1 145789999999988776666678999999998866 456899888766544333
No 384
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=79.53 E-value=1.2 Score=41.30 Aligned_cols=42 Identities=14% Similarity=0.130 Sum_probs=36.3
Q ss_pred CCCCCEEEEECCccCcccc--cCCCceEEEEeCCHHHHHHHHHc
Q 017080 120 LPSGSLVLDAGCGNGKYLG--LNPDCFFVGCDISPSLIKICVDR 161 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~--~~~~~~v~gvD~s~~~~~~a~~~ 161 (377)
..+|..|||.-||+|..+. ...+.+.+|+|+++...+.++++
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGG
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHH
Confidence 3678899999999999653 35678999999999999999887
No 385
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=79.20 E-value=2.8 Score=40.38 Aligned_cols=91 Identities=19% Similarity=0.162 Sum_probs=61.8
Q ss_pred hCCCCCCEEEEECC-cc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC-----------------
Q 017080 118 NSLPSGSLVLDAGC-GN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPY----------------- 175 (377)
Q Consensus 118 ~~~~~~~~vLDiGc-G~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~----------------- 175 (377)
..+.+|.+||=.|+ |. |.++. ...++++++++.++..++.+++.+..... |..+..+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVI-NRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEE-EHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE-ecccccccccccccccccchhhhH
Confidence 35678999999997 33 55432 25678999999999999999887654332 1111000
Q ss_pred --------CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 176 --------RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 176 --------~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
....+|+|+....- ..++...+.|++||.+++.-
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G~----------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTGR----------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSCH----------HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHhCCCceEEEECCCc----------hHHHHHHHHHhcCCEEEEEe
Confidence 13468998875331 35677888999999988764
No 386
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.72 E-value=5.1 Score=36.70 Aligned_cols=85 Identities=19% Similarity=0.167 Sum_probs=56.1
Q ss_pred CEEEEECCcc-Ccc-ccc--CCCc--eEEEEeCCHHHHHHHHHcCCe-EEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 124 SLVLDAGCGN-GKY-LGL--NPDC--FFVGCDISPSLIKICVDRGHE-VLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 124 ~~vLDiGcG~-G~~-~~~--~~~~--~v~gvD~s~~~~~~a~~~~~~-~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
.+|.=||+|. |.. +.. ..+. +|+++|.++..++.+.+.++. -...|..++ .-...|+|+..--.. .
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp~~-----~ 106 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSPVR-----T 106 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSCGG-----G
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCCHH-----H
Confidence 6899999987 553 221 3344 999999999999888877652 222333320 123469988764332 2
Q ss_pred HHHHHHHHHHHccccCcEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~ 216 (377)
...+++++...++||..++
T Consensus 107 -~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 107 -FREIAKKLSYILSEDATVT 125 (314)
T ss_dssp -HHHHHHHHHHHSCTTCEEE
T ss_pred -HHHHHHHHhhccCCCcEEE
Confidence 5678899999999886543
No 387
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=78.38 E-value=0.34 Score=46.39 Aligned_cols=93 Identities=16% Similarity=0.218 Sum_probs=57.7
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCC------CCC-CC--------------
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAV------NLP-YR-------------- 176 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~------~~~-~~-------------- 176 (377)
++.+|+=+|+|. |..+. ...|++|+++|.++..++.+.+.+.++...+.. ... +.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 467999999997 55432 256789999999999988888776665433211 000 00
Q ss_pred ----CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 177 ----SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 177 ----~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
-...|+|+....+.--+. +.-+-+++.+.+|||.+++-
T Consensus 269 l~e~l~~aDVVI~tvlipg~~a---p~Lvt~emv~~Mk~GsVIVD 310 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRPA---PRLVTREMLDSMKPGSVVVD 310 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSCC---CCCBCHHHHTTSCTTCEEEE
T ss_pred HHHHhcCCCEEEECCcCCCCCC---CEEecHHHHhcCCCCCEEEE
Confidence 035699987532221111 22234678888999876544
No 388
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=78.15 E-value=0.57 Score=43.90 Aligned_cols=91 Identities=18% Similarity=0.102 Sum_probs=58.4
Q ss_pred CCC-CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHH-HcCCeEEEeeCCC---CCCCCCceeEEEeccch
Q 017080 119 SLP-SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICV-DRGHEVLVADAVN---LPYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~-~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~d~~~---~~~~~~~fD~V~~~~~l 189 (377)
.+. +|.+||=+|+|. |.++. ...+++|+++|.++...+.++ +.+..... |..+ +.-..+.+|+|+-.-.-
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV-IGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEE-ETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceee-ccccHHHHHHhcCCCCEEEECCCC
Confidence 456 889999999865 55432 245679999999999888887 44543222 2221 00002368998865321
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. ..++...+.|+|||.+++.-
T Consensus 255 ~---------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 255 H---------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp C---------CCSHHHHTTEEEEEEEEECS
T ss_pred h---------HHHHHHHHHhccCCEEEEeC
Confidence 1 23556778999999987753
No 389
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=78.12 E-value=10 Score=35.74 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=64.3
Q ss_pred CCCEEEEECCccCccc-ccCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHH
Q 017080 122 SGSLVLDAGCGNGKYL-GLNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKK 200 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~ 200 (377)
.+.+||.++-+-|.+. ...+..+++.+.-|.........+++.... ...+..+...||+|+...-=+ ......+.
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~d~v~~~~Pk~--k~~~~~~~ 120 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQARL--ALPWEAAAGAYDLVVLALPAG--RGTAYVQA 120 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCEE--CCGGGSCTTCEEEEEEECCGG--GCHHHHHH
T ss_pred hCCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCccc--cCCccCCcCCCCEEEEECCcc--hhHHHHHH
Confidence 3469999999999754 335568888887787777777777665422 112223357899988753211 12112578
Q ss_pred HHHHHHHccccCcEEEEEE
Q 017080 201 AIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 201 ~l~~~~r~LkpgG~l~i~~ 219 (377)
.|.++.+.|+|||.|++.-
T Consensus 121 ~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 121 SLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCCEEEEEE
Confidence 8999999999999998875
No 390
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.50 E-value=2.9 Score=37.72 Aligned_cols=93 Identities=14% Similarity=0.027 Sum_probs=57.6
Q ss_pred HHHhCCCCCCEEEEECCccCcccccCCCceEEEEeCCHHHHHHHHHcCCeEE-EeeCCCCCCCCCceeEEEeccc----h
Q 017080 115 TFLNSLPSGSLVLDAGCGNGKYLGLNPDCFFVGCDISPSLIKICVDRGHEVL-VADAVNLPYRSDFGDAAISIAV----L 189 (377)
Q Consensus 115 ~~l~~~~~~~~vLDiGcG~G~~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~d~~~~~~~~~~fD~V~~~~~----l 189 (377)
.++.++ +|.+||=| +. --..|+.+|.-+++.+. ..+. ..|+...+. .+.+|+|++... -
T Consensus 157 ~~~~k~-~g~~vl~v--~~---~~~~p~k~v~wi~Pi~G---------At~~~~lDfg~p~~-~~k~DvV~SDMApn~sG 220 (320)
T 2hwk_A 157 SFVSKL-KGRTVLVV--GE---KLSVPGKMVDWLSDRPE---------ATFRARLDLGIPGD-VPKYDIIFVNVRTPYKY 220 (320)
T ss_dssp HHHHTS-SCSEEEEE--ES---CCCCTTSEEEEEESSTT---------CSEECCGGGCSCTT-SCCEEEEEEECCCCCCS
T ss_pred HHHhhC-CCcEEEEE--ec---ccccCCceeEeeccCCC---------ceeecccccCCccc-cCcCCEEEEcCCCCCCC
Confidence 344443 45667766 21 11257778888887553 5555 667666432 377999999653 3
Q ss_pred hh-c--CChHH-HHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 190 HH-L--STESR-RKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 190 ~h-~--~~~~~-~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
|| - .|-.. ..-+++...++|+|||.+++-.|...
T Consensus 221 h~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 221 HHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred ccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 33 1 11111 23366778899999999999998765
No 391
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.74 E-value=5.9 Score=35.18 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=52.4
Q ss_pred EEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHHcCCe-EEEeeCCCCCCCCCceeEEEeccchhhcCChHHHH
Q 017080 125 LVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVDRGHE-VLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRK 199 (377)
Q Consensus 125 ~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~ 199 (377)
+|.=||+|. |... .. ..+.+|+++|.++..++.+.+.++. ....|..+. ...|+|+..---. . ..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~D~vi~av~~~-----~-~~ 71 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL----QTAKIIFLCTPIQ-----L-IL 71 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG----TTCSEEEECSCHH-----H-HH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh----CCCCEEEEECCHH-----H-HH
Confidence 678899987 5532 21 3456999999999988877765543 122232222 4579988864322 1 56
Q ss_pred HHHHHHHHccccCcEE
Q 017080 200 KAIEELVRVVKKGSLV 215 (377)
Q Consensus 200 ~~l~~~~r~LkpgG~l 215 (377)
.+++++...++||..+
T Consensus 72 ~~~~~l~~~~~~~~~v 87 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIV 87 (279)
T ss_dssp HHHHHHGGGSCTTCEE
T ss_pred HHHHHHHhhCCCCCEE
Confidence 7888888888887654
No 392
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=75.89 E-value=2 Score=39.90 Aligned_cols=68 Identities=10% Similarity=-0.088 Sum_probs=46.5
Q ss_pred CCEEEEECCccCcccc--cCCCc-eEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCC-CCceeEEEeccchh
Q 017080 123 GSLVLDAGCGNGKYLG--LNPDC-FFVGCDISPSLIKICVDRGHEVLVADAVNLPYR-SDFGDAAISIAVLH 190 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~--~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~-~~~fD~V~~~~~l~ 190 (377)
+.++||+.||.|.+.. ...|. .+.++|+++..++..+.+--....+|+.++... -..+|+|+..--..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECCCCC
Confidence 4699999999998753 23455 577899999999888877111126777765311 13589999864433
No 393
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=75.63 E-value=1.5 Score=41.07 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=58.3
Q ss_pred CCC-CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHH-HcCCeEEEeeCCCC---CCCCCceeEEEeccch
Q 017080 119 SLP-SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICV-DRGHEVLVADAVNL---PYRSDFGDAAISIAVL 189 (377)
Q Consensus 119 ~~~-~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~d~~~~---~~~~~~fD~V~~~~~l 189 (377)
.+. +|.+||=+|+|. |.++. ...+++|+++|.++...+.+. +.+.... .|..+. .-..+.+|+|+.....
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhhCCCCEEEECCCc
Confidence 455 889999999865 55432 246789999999999888877 4454432 233221 0001468999875432
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
. ..++...+.|+++|.++..-
T Consensus 262 ~---------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 262 V---------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp C---------CCSHHHHHHEEEEEEEEECC
T ss_pred H---------HHHHHHHHHHhcCCEEEEEc
Confidence 1 13455678899999987754
No 394
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=75.41 E-value=2.4 Score=39.29 Aligned_cols=70 Identities=16% Similarity=0.022 Sum_probs=49.3
Q ss_pred CCEEEEECCccCcccc--cCCC--c-eE-EEEeCCHHHHHHHHHc-CCeEEEeeCCCCC---CCCCceeEEEeccchhhc
Q 017080 123 GSLVLDAGCGNGKYLG--LNPD--C-FF-VGCDISPSLIKICVDR-GHEVLVADAVNLP---YRSDFGDAAISIAVLHHL 192 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~--~~~~--~-~v-~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~---~~~~~fD~V~~~~~l~h~ 192 (377)
..+++|+-||.|.+.. ...| . .+ .++|+++.+.+..+.+ .-.++.+|+.++. ++...+|+++...-...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 4589999999999752 1223 3 45 6999999999888877 3336678888764 223368999986554444
No 395
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.39 E-value=16 Score=37.20 Aligned_cols=144 Identities=15% Similarity=0.097 Sum_probs=83.6
Q ss_pred CCCEEEEECCccCccc-cc---CC--------CceEEEEeCCHHHHHHHHH-----------------------------
Q 017080 122 SGSLVLDAGCGNGKYL-GL---NP--------DCFFVGCDISPSLIKICVD----------------------------- 160 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~-~~---~~--------~~~v~gvD~s~~~~~~a~~----------------------------- 160 (377)
+...|+-+|||.=... +. .+ +..++=+|....+....+.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 4568999999985422 21 23 5678888875544322211
Q ss_pred -cCCeEEEeeCCCCC----------C-CCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEEcCCCccchh
Q 017080 161 -RGHEVLVADAVNLP----------Y-RSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITVWAVEQEDKS 228 (377)
Q Consensus 161 -~~~~~~~~d~~~~~----------~-~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~ 228 (377)
.+..++..|+.+.. + ..+.--++++-.++.+++.++ ..++|+.+.+. |+|.+++.+........+
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~-~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPER-SDSIIEATSKM--ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHH-HHHHHHHHHTS--SSEEEEEEEECCTTCTTS
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHH-HHHHHHHHhhC--CCceEEEEEeecCCCCCC
Confidence 02456777887631 2 334455788888999998765 78899888864 677777765432211111
Q ss_pred hhhccccchHHHHhhhhCCCCCCcCCCCCCCcccHHhHhhcCCCcc
Q 017080 229 LVTKWTPLTQKYVEEWIGPGSPRVRSPSARTLESIPETEDNGSEEQ 274 (377)
Q Consensus 229 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~ 274 (377)
... ..+...+.....+......+.++++..+.|.+.||..
T Consensus 264 ~f~------~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~ 303 (695)
T 2zwa_A 264 PFS------KQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAY 303 (695)
T ss_dssp HHH------HHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCE
T ss_pred hHH------HHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCC
Confidence 111 1112222211122222345667889999999999964
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=75.19 E-value=0.6 Score=44.38 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=33.2
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEE
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVL 166 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 166 (377)
++.+|+=+|+|. |..+. ...+++|+.+|.++...+.++..+..+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFI 219 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEE
Confidence 578999999987 55432 2456789999999887777776665543
No 397
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=74.54 E-value=0.49 Score=45.33 Aligned_cols=94 Identities=19% Similarity=0.174 Sum_probs=55.2
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCC-----------------------CCC
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAV-----------------------NLP 174 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~-----------------------~~~ 174 (377)
++.+|+=+|+|. |..+. ...|++|+++|.++...+.++..+..+...|.. .+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~ 250 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFA 250 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHH
Confidence 478999999987 55432 245679999999998888776666655422211 010
Q ss_pred CCCCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 175 YRSDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 175 ~~~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
-.-...|+|+..-.+.--+. +.-+-+++.+.+||||+++-.
T Consensus 251 e~~~~aDvVI~~~~~pg~~a---p~li~~~~l~~mk~g~vIVdv 291 (401)
T 1x13_A 251 AQAKEVDIIVTTALIPGKPA---PKLITREMVDSMKAGSVIVDL 291 (401)
T ss_dssp HHHHHCSEEEECCCCTTSCC---CCCBCHHHHHTSCTTCEEEET
T ss_pred HHhCCCCEEEECCccCCCCC---CeeeCHHHHhcCCCCcEEEEE
Confidence 00124799987632211111 111224567788999976554
No 398
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=74.42 E-value=0.64 Score=44.13 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=55.0
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHc-CCeEEEe--eCCCCCCCCCceeEEEeccchhhcCC
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDR-GHEVLVA--DAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~--d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
++.+|+=+|+|. |..+. ...+++|+++|.++..++.+.+. +..+... +..++...-...|+|+..-.......
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t 246 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA 246 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 468999999976 55332 24567999999999988777663 3332111 11111100135799987432221111
Q ss_pred hHHHHHHHHHHHHccccCcEEEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+.-+.+++.+.+||||.++..
T Consensus 247 ---~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 247 ---PKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp ---CCCBCHHHHTTSCTTCEEEEG
T ss_pred ---cceecHHHHhcCCCCcEEEEE
Confidence 112345677889999986544
No 399
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=73.86 E-value=10 Score=33.92 Aligned_cols=88 Identities=16% Similarity=0.145 Sum_probs=54.7
Q ss_pred CEEEEECCcc-Cccccc---CCCceEEEEeCCHHHHHHHHHcCCeEEEe------eCC--CC-CCCC--CceeEEEeccc
Q 017080 124 SLVLDAGCGN-GKYLGL---NPDCFFVGCDISPSLIKICVDRGHEVLVA------DAV--NL-PYRS--DFGDAAISIAV 188 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~------d~~--~~-~~~~--~~fD~V~~~~~ 188 (377)
++|.=||+|. |..... ..+.+|+.+|.++..++...+.++..... .+. .. .... ...|+|+..--
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 4799999987 553321 34679999999998888777665443210 000 10 0111 26798888643
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
-. . ...+++++...++|+..++.
T Consensus 84 ~~-----~-~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 84 AQ-----Q-LDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp HH-----H-HHHHHHHHGGGCCTTCEEEE
T ss_pred cc-----c-HHHHHHHHHHhcCCCCEEEE
Confidence 22 1 56788888888988765443
No 400
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=73.60 E-value=1.7 Score=34.81 Aligned_cols=41 Identities=12% Similarity=0.036 Sum_probs=31.4
Q ss_pred CCCCCceeEEEeccchh-h-cCChHHHHHHHHHHHHccccCcEEEE
Q 017080 174 PYRSDFGDAAISIAVLH-H-LSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 174 ~~~~~~fD~V~~~~~l~-h-~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
.++.++||.|+...--. . ..- +..++..+.+.|||||.|.-
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l---~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKF---PKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCC---CHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhc---CHHHHHHHHHHhCCCCEEEe
Confidence 46689999998765333 2 222 47999999999999999876
No 401
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=72.53 E-value=5.6 Score=37.73 Aligned_cols=71 Identities=14% Similarity=0.190 Sum_probs=45.6
Q ss_pred CCCCEEEEECCccCcccc-------cC----CCceEEEEeCCHHHHHHHHHc--CC-eEEE-eeCCCCCCCCCceeEEEe
Q 017080 121 PSGSLVLDAGCGNGKYLG-------LN----PDCFFVGCDISPSLIKICVDR--GH-EVLV-ADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~-------~~----~~~~v~gvD~s~~~~~~a~~~--~~-~~~~-~d~~~~~~~~~~fD~V~~ 185 (377)
+.+-+|+|+|.|+|.++. .. ...+++.||+|+...+.-+++ +. ++.. .++.++| ++ .=+|++
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~~l~~lp--~~-~~~viA 155 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVP--EG-PAVILA 155 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSC--CS-SEEEEE
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeCChhhcC--CC-CeEEEe
Confidence 334589999999999742 12 235899999999988766554 11 2222 2233444 22 357778
Q ss_pred ccchhhcCC
Q 017080 186 IAVLHHLST 194 (377)
Q Consensus 186 ~~~l~h~~~ 194 (377)
+.++..+|-
T Consensus 156 NE~fDAlPv 164 (387)
T 1zkd_A 156 NEYFDVLPI 164 (387)
T ss_dssp ESSGGGSCC
T ss_pred ccccccCce
Confidence 888877764
No 402
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=72.42 E-value=8.5 Score=34.18 Aligned_cols=85 Identities=20% Similarity=0.195 Sum_probs=53.4
Q ss_pred CEEEEECCcc-Cccc-cc--CCCc--eEEEEeCCHHHHHHHHHcCCeE-EEeeCCCCCCCCC-ceeEEEeccchhhcCCh
Q 017080 124 SLVLDAGCGN-GKYL-GL--NPDC--FFVGCDISPSLIKICVDRGHEV-LVADAVNLPYRSD-FGDAAISIAVLHHLSTE 195 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~~--~~~~--~v~gvD~s~~~~~~a~~~~~~~-~~~d~~~~~~~~~-~fD~V~~~~~l~h~~~~ 195 (377)
++|.=||+|. |... .. ..+. +|+++|.++..++.+.+.++.. ...|..+. -. ..|+|+..- +..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~aDvVilav-----p~~ 73 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV---EDFSPDFVMLSS-----PVR 73 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGG---GGTCCSEEEECS-----CHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHH---hcCCCCEEEEcC-----CHH
Confidence 3688899987 5532 11 2334 8999999999888887765531 12232221 12 569888753 322
Q ss_pred HHHHHHHHHHHHccccCcEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i 217 (377)
. ...++.++...++|+..++.
T Consensus 74 ~-~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 74 T-FREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp H-HHHHHHHHHHHSCTTCEEEE
T ss_pred H-HHHHHHHHHhhCCCCcEEEE
Confidence 2 45778888888998875443
No 403
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=72.08 E-value=4.1 Score=41.52 Aligned_cols=94 Identities=12% Similarity=0.174 Sum_probs=58.0
Q ss_pred CCEEEEECCccCccc----cc-------CCC-----ceEEEEeC---CHHHHHHHHHc----------------------
Q 017080 123 GSLVLDAGCGNGKYL----GL-------NPD-----CFFVGCDI---SPSLIKICVDR---------------------- 161 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~----~~-------~~~-----~~v~gvD~---s~~~~~~a~~~---------------------- 161 (377)
.-+|||+|-|+|... .. .|. .++++++. +++.+..+-..
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 359999999999842 11 122 37999998 77777633321
Q ss_pred ----------CCeEEEeeCCC-CC-CC---CCceeEEEeccchhhcCChHH-HHHHHHHHHHccccCcEEEE
Q 017080 162 ----------GHEVLVADAVN-LP-YR---SDFGDAAISIAVLHHLSTESR-RKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 162 ----------~~~~~~~d~~~-~~-~~---~~~fD~V~~~~~l~h~~~~~~-~~~~l~~~~r~LkpgG~l~i 217 (377)
.+++..+|+.+ ++ +. ...||+++.-..-... +++. -..+++.++++++|||.+.-
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 02244555543 22 11 4679999885532221 1111 15789999999999998654
No 404
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=71.96 E-value=6.8 Score=31.30 Aligned_cols=91 Identities=9% Similarity=-0.015 Sum_probs=56.9
Q ss_pred CCEEEEECCcc-Cccc-cc--CCCceEEEEeCC-HHHHHHHH---HcCCeEEEeeCCCCC----CCCCceeEEEeccchh
Q 017080 123 GSLVLDAGCGN-GKYL-GL--NPDCFFVGCDIS-PSLIKICV---DRGHEVLVADAVNLP----YRSDFGDAAISIAVLH 190 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s-~~~~~~a~---~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~ 190 (377)
..+|+=+|+|. |..+ .. ..+.+|+.+|.+ +...+... +.++.++.+|..+.. ..-...|+|++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~--- 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS--- 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS---
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec---
Confidence 35788888875 4432 11 457899999997 44333332 337899999987632 1134678887753
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
++++ ....+..+.+.+.|...++...
T Consensus 80 --~~d~-~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 80 --DNDA-DNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp --SCHH-HHHHHHHHHHHHTSSSCEEEEC
T ss_pred --CChH-HHHHHHHHHHHHCCCCEEEEEE
Confidence 3333 4566677777777777766643
No 405
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=71.57 E-value=4.9 Score=37.41 Aligned_cols=90 Identities=16% Similarity=0.142 Sum_probs=59.2
Q ss_pred hCCCCCCEEEEECCcc-Ccccc---cCC-CceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC------CCCCC-ceeEEEe
Q 017080 118 NSLPSGSLVLDAGCGN-GKYLG---LNP-DCFFVGCDISPSLIKICVDRGHEVLVADAVNL------PYRSD-FGDAAIS 185 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~-G~~~~---~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~------~~~~~-~fD~V~~ 185 (377)
..+.+|.+||=+|+|. |.++. ... +++|+++|.|+.-++.+++.+..... |..+. ....+ .+|+|+-
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~v~~~~~g~g~Dvvid 260 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVV-DARRDPVKQVMELTRGRGVNVAMD 260 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEE-ETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEE-eccchHHHHHHHHhCCCCCcEEEE
Confidence 4678899999999964 44331 133 78999999999999999887765432 22221 01123 6999986
Q ss_pred ccchhhcCChHHHHH--HHHHHHHccccCcEEEEEE
Q 017080 186 IAVLHHLSTESRRKK--AIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~--~l~~~~r~LkpgG~l~i~~ 219 (377)
.-. . .. .+....+. +||.+++.-
T Consensus 261 ~~G-----~----~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 261 FVG-----S----QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp SSC-----C----HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCC-----C----chHHHHHHHhhc--CCCEEEEEe
Confidence 532 2 12 55666666 899887754
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=71.01 E-value=10 Score=32.69 Aligned_cols=91 Identities=13% Similarity=0.060 Sum_probs=60.7
Q ss_pred CCCEEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----CCCCceeEEEeccchhhcC
Q 017080 122 SGSLVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLS 193 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~ 193 (377)
...+|+=+|+|. |..+ .. ..+. |+++|.++..++.++ .++.++.+|+.+.. ..-...|.|++. .+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~-----~~ 80 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVD-----LE 80 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEEC-----CS
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEc-----CC
Confidence 346899999976 5432 21 3456 999999999888777 77899999987632 113467888875 23
Q ss_pred ChHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
+++ ....+....+.+.|+..++....
T Consensus 81 ~d~-~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 81 SDS-ETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp CHH-HHHHHHHHHHHHCSSSEEEEECS
T ss_pred CcH-HHHHHHHHHHHHCCCCeEEEEEC
Confidence 433 44556667777888767666543
No 407
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=70.41 E-value=0.89 Score=42.79 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcC---CeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 123 GSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRG---HEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
+.+||=+|+|. |..+. ...+++|+++|.++...+.+.+.+ +.....+..++.-.-..+|+|+..-.....+.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~- 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA- 245 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC-
Confidence 47999999975 44332 245679999999998887776542 22221111111100125799987654433211
Q ss_pred HHHHHHHHHHHHccccCcEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+.-+.++..+.++|||.++..
T Consensus 246 --~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 246 --PILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp --CCCBCHHHHTTSCTTCEEEET
T ss_pred --CeecCHHHHhhCCCCCEEEEE
Confidence 111244566788999976654
No 408
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=70.09 E-value=9.5 Score=32.49 Aligned_cols=88 Identities=14% Similarity=0.028 Sum_probs=57.9
Q ss_pred EEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHH-cCCeEEEeeCCCCC----CCCCceeEEEeccchhhcCCh
Q 017080 125 LVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVD-RGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 125 ~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~~~ 195 (377)
+|+=+|+|. |..+ .. ..+..|+.+|.++..++...+ .+..++.+|..+.. ..-...|+|++. ++++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~-----~~~d 76 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL-----TPRD 76 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC-----CSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe-----cCCc
Confidence 577788876 4432 21 457899999999998877544 47889999987632 112467888875 3343
Q ss_pred HHHHHHHHHHHHccccCcEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+ ....+..+.+.+.|...++..
T Consensus 77 ~-~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 77 E-VNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp H-HHHHHHHHHHHTSCCCEEEEC
T ss_pred H-HHHHHHHHHHHHcCCCeEEEE
Confidence 3 455666666766666665543
No 409
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=69.98 E-value=8.3 Score=35.99 Aligned_cols=88 Identities=14% Similarity=0.075 Sum_probs=59.2
Q ss_pred CCCCEEEEECCc--cCcccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-------CCCCceeEEEeccc
Q 017080 121 PSGSLVLDAGCG--NGKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP-------YRSDFGDAAISIAV 188 (377)
Q Consensus 121 ~~~~~vLDiGcG--~G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-------~~~~~fD~V~~~~~ 188 (377)
.+|.+||=+|++ .|.++. ...+++|+++. |+.-.+.+++.+..... |..+.. ...+.+|+|+-.-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi-~~~~~~~~~~v~~~t~g~~d~v~d~~- 239 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVF-DYRAPNLAQTIRTYTKNNLRYALDCI- 239 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEE-ETTSTTHHHHHHHHTTTCCCEEEESS-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEE-ECCCchHHHHHHHHccCCccEEEECC-
Confidence 678999999984 466542 25678999885 88888999888765332 322211 1134589988643
Q ss_pred hhhcCChHHHHHHHHHHHHcc-ccCcEEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVV-KKGSLVLITV 219 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~L-kpgG~l~i~~ 219 (377)
.. ...+..+.+.| ++||++++.-
T Consensus 240 ----g~----~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 240 ----TN----VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ----CS----HHHHHHHHHHSCTTCEEEEESS
T ss_pred ----Cc----hHHHHHHHHHhhcCCCEEEEEe
Confidence 22 35677788888 6999987753
No 410
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=69.87 E-value=4.8 Score=36.65 Aligned_cols=67 Identities=16% Similarity=0.077 Sum_probs=48.9
Q ss_pred CCCCEEEEECCccCcccc--cCCCce---EEEEeCCHHHHHHHHHc--CCeEEEeeCCCCCC---C-CCceeEEEecc
Q 017080 121 PSGSLVLDAGCGNGKYLG--LNPDCF---FVGCDISPSLIKICVDR--GHEVLVADAVNLPY---R-SDFGDAAISIA 187 (377)
Q Consensus 121 ~~~~~vLDiGcG~G~~~~--~~~~~~---v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~~---~-~~~fD~V~~~~ 187 (377)
..+.++||+-||.|.+.. ...|.+ |.++|+++...+..+.+ +..+..+|+.++.. + .+.+|+++...
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 455699999999998642 234443 58999999998877766 45678899988641 1 14689999854
No 411
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=69.87 E-value=6.5 Score=35.00 Aligned_cols=81 Identities=12% Similarity=0.011 Sum_probs=51.0
Q ss_pred EEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHH
Q 017080 125 LVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKK 200 (377)
Q Consensus 125 ~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~ 200 (377)
+|.=||+|. |... . .. +.+|+.+|.++...+...+.++... +..+. -...|+|+.. +++......
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~---~~~~D~vi~~-----v~~~~~~~~ 71 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--VPLER---VAEARVIFTC-----LPTTREVYE 71 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--CCGGG---GGGCSEEEEC-----CSSHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--CHHHH---HhCCCEEEEe-----CCChHHHHH
Confidence 577889987 5532 1 14 7899999999988777666554432 11111 1357988875 444322455
Q ss_pred HHHHHHHccccCcEEE
Q 017080 201 AIEELVRVVKKGSLVL 216 (377)
Q Consensus 201 ~l~~~~r~LkpgG~l~ 216 (377)
+++++...+++|..++
T Consensus 72 v~~~l~~~l~~~~~vv 87 (289)
T 2cvz_A 72 VAEALYPYLREGTYWV 87 (289)
T ss_dssp HHHHHTTTCCTTEEEE
T ss_pred HHHHHHhhCCCCCEEE
Confidence 7778888888876544
No 412
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=69.61 E-value=8.8 Score=34.29 Aligned_cols=81 Identities=20% Similarity=0.251 Sum_probs=52.2
Q ss_pred CEEEEECC-cc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHH
Q 017080 124 SLVLDAGC-GN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRR 198 (377)
Q Consensus 124 ~~vLDiGc-G~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~ 198 (377)
.+|.=||+ |. |... . ...+.+|+++|.++...+.+.+.++.. .+..+ .-...|+|+..- +... .
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~--~~~~~---~~~~aDvVi~av-----~~~~-~ 80 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL--TDGDG---WIDEADVVVLAL-----PDNI-I 80 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC--CCSSG---GGGTCSEEEECS-----CHHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc--CCHHH---HhcCCCEEEEcC-----CchH-H
Confidence 48999999 87 5532 2 134579999999998887776655432 12111 123579988754 3322 4
Q ss_pred HHHHHHHHHccccCcEE
Q 017080 199 KKAIEELVRVVKKGSLV 215 (377)
Q Consensus 199 ~~~l~~~~r~LkpgG~l 215 (377)
..+++++...++||..+
T Consensus 81 ~~v~~~l~~~l~~~~iv 97 (286)
T 3c24_A 81 EKVAEDIVPRVRPGTIV 97 (286)
T ss_dssp HHHHHHHGGGSCTTCEE
T ss_pred HHHHHHHHHhCCCCCEE
Confidence 67788888888887543
No 413
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=69.07 E-value=0.94 Score=42.74 Aligned_cols=93 Identities=15% Similarity=0.213 Sum_probs=54.0
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCC---CCCCCCceeEEEeccchhhcC
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDR-GHEVLVADAVN---LPYRSDFGDAAISIAVLHHLS 193 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~---~~~~~~~fD~V~~~~~l~h~~ 193 (377)
++.+|+=+|+|. |..+. ...+++|+++|.++..++.+.+. +..+ ..|..+ +.-.-..+|+|+.........
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~-~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~ 243 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRV-ITLTATEANIKKSVQHADLLIGAVLVPGAK 243 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSE-EEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceE-EEecCCHHHHHHHHhCCCEEEECCCCCccc
Confidence 357999999975 54332 25677999999999888777653 4432 222221 110013579988755433211
Q ss_pred ChHHHHHHHHHHHHccccCcEEEEE
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
. +.-+.+++.+.+||||.++..
T Consensus 244 ~---~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 244 A---PKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp -----CCSCHHHHTTSCTTCEEEEC
T ss_pred c---chhHHHHHHHhhcCCCEEEEE
Confidence 1 112356677888999986654
No 414
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=68.99 E-value=5.1 Score=36.20 Aligned_cols=84 Identities=15% Similarity=0.165 Sum_probs=55.6
Q ss_pred CEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHH
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRK 199 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~ 199 (377)
.+|.=||+|. |... . ...+.+|+++|.++..++.+.+.++.+. .+..+. -. .|+|+.. +++.....
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~---~~-aDvvi~~-----vp~~~~~~ 85 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLA-DSVADV---AA-ADLIHIT-----VLDDAQVR 85 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEEC-SSHHHH---TT-SSEEEEC-----CSSHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEc-CCHHHH---Hh-CCEEEEE-----CCChHHHH
Confidence 5799999987 5532 2 2456799999999998887777665431 122221 12 6888774 55543356
Q ss_pred HHHHHHHHccccCcEEEE
Q 017080 200 KAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 200 ~~l~~~~r~LkpgG~l~i 217 (377)
.+++++...++||..++-
T Consensus 86 ~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 86 EVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp HHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHhcCCCCEEEE
Confidence 788889999988765443
No 415
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=68.38 E-value=8.6 Score=36.95 Aligned_cols=86 Identities=17% Similarity=0.142 Sum_probs=53.9
Q ss_pred CCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 120 LPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 120 ~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.-.|.+|+=+|+|. |.... ...|++|+++|+++.....+...+..+ .++.+. -...|+|+....-.|+-+
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v--~~Leea---l~~ADIVi~atgt~~lI~- 290 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL--VKLNEV---IRQVDIVITCTGNKNVVT- 290 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE--CCHHHH---TTTCSEEEECSSCSCSBC-
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe--ccHHHH---HhcCCEEEECCCCcccCC-
Confidence 45789999999998 65432 245789999999997665565555432 233321 134698888432233333
Q ss_pred HHHHHHHHHHHHccccCcEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.+..+.+|||++++-.
T Consensus 291 -------~e~l~~MK~gailINv 306 (435)
T 3gvp_A 291 -------REHLDRMKNSCIVCNM 306 (435)
T ss_dssp -------HHHHHHSCTTEEEEEC
T ss_pred -------HHHHHhcCCCcEEEEe
Confidence 2456778998765444
No 416
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=67.73 E-value=2.3 Score=39.21 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=35.6
Q ss_pred CCCCCEEEEECCccCcccc--cCCCceEEEEeCCH---HHHHHHHHc
Q 017080 120 LPSGSLVLDAGCGNGKYLG--LNPDCFFVGCDISP---SLIKICVDR 161 (377)
Q Consensus 120 ~~~~~~vLDiGcG~G~~~~--~~~~~~v~gvD~s~---~~~~~a~~~ 161 (377)
..+|..|||.-||+|..+. ...+.+.+|+|+++ ..++.++++
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~R 286 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTF 286 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHH
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHH
Confidence 3678899999999999653 34577999999999 999999887
No 417
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=67.56 E-value=3.4 Score=38.34 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=47.9
Q ss_pred CEEEEECCccCccccc--CCC---ceEEEEeCCHHHHHHHHHc--CCeEEEeeCCCCC---CCCCceeEEEeccch
Q 017080 124 SLVLDAGCGNGKYLGL--NPD---CFFVGCDISPSLIKICVDR--GHEVLVADAVNLP---YRSDFGDAAISIAVL 189 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~~--~~~---~~v~gvD~s~~~~~~a~~~--~~~~~~~d~~~~~---~~~~~fD~V~~~~~l 189 (377)
.+++|+-||.|.+..- ..+ -.|.++|+++...+.-+.+ +..++.+|+.++. ++...+|+++...-.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCC
Confidence 4899999999987531 223 3577999999999888877 4567788888764 223468999875443
No 418
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=66.40 E-value=19 Score=31.95 Aligned_cols=84 Identities=23% Similarity=0.249 Sum_probs=53.5
Q ss_pred CEEEEECCcc-Cccc-c----cCCCceEEEEeCCHHHHHHHHHcCCe-EEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 124 SLVLDAGCGN-GKYL-G----LNPDCFFVGCDISPSLIKICVDRGHE-VLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~----~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
.+|.=||+|. |... . ...+.+|+++|.++..++.+.+.++. ....|..+. -...|+|+..---. .
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~aDvVilavp~~-----~ 78 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVF---AALADVIILAVPIK-----K 78 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTT---GGGCSEEEECSCHH-----H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHh---hcCCCEEEEcCCHH-----H
Confidence 5799999998 5532 1 13367999999999988877666542 122233221 23569888864322 2
Q ss_pred HHHHHHHHHHHc-cccCcEEE
Q 017080 197 RRKKAIEELVRV-VKKGSLVL 216 (377)
Q Consensus 197 ~~~~~l~~~~r~-LkpgG~l~ 216 (377)
...+++++... ++||..++
T Consensus 79 -~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 79 -TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp -HHHHHHHHHTSCCCTTCEEE
T ss_pred -HHHHHHHHHhcCCCCCCEEE
Confidence 45678888888 88875444
No 419
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=65.77 E-value=6.7 Score=35.40 Aligned_cols=87 Identities=14% Similarity=0.062 Sum_probs=53.3
Q ss_pred CCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-++++|+=||+|. |.... ...+++|+++|.++...+.+.+.++... +..++...-...|+|+..-..+ +-+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~~p~~-~i~-- 227 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF--HISKAAQELRDVDVCINTIPAL-VVT-- 227 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE--EGGGHHHHTTTCSEEEECCSSC-CBC--
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec--ChhhHHHHhcCCCEEEECCChH-HhC--
Confidence 3678999999987 55332 1456799999999987666655565543 2222211124579998876553 333
Q ss_pred HHHHHHHHHHHccccCcEEEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
. +....+|||+.++-.
T Consensus 228 -~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 228 -A-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp -H-----HHHHHSCTTCEEEEC
T ss_pred -H-----HHHHhcCCCCEEEEe
Confidence 1 234567898865543
No 420
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=65.43 E-value=2.1 Score=38.11 Aligned_cols=56 Identities=7% Similarity=0.079 Sum_probs=34.0
Q ss_pred eEEEeeCCCC--CCCCCceeEEEeccchhh-------cCCh----HHHHHHHHHHHHccccCcEEEEEE
Q 017080 164 EVLVADAVNL--PYRSDFGDAAISIAVLHH-------LSTE----SRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 164 ~~~~~d~~~~--~~~~~~fD~V~~~~~l~h-------~~~~----~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
+++.+|+... .+++++||+|++.=-..- +.+. +.....|.++.++|+|||.+++..
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4566665431 134677888887422110 0010 014678888999999999998874
No 421
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=64.72 E-value=9.2 Score=29.59 Aligned_cols=90 Identities=10% Similarity=0.030 Sum_probs=54.0
Q ss_pred CCEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----CCCCceeEEEeccchhhcCC
Q 017080 123 GSLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~~ 194 (377)
+.+|+=+|+|. |..+. . ..+.+|+.+|.++..++.+++.+..++.+|..+.. ..-+.+|+|+....-.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~---- 81 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN---- 81 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC----
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc----
Confidence 45799999865 44322 1 34678999999988777665556677777765421 1134689888753221
Q ss_pred hHHHHHHHHHHHHccccCcEEEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.+ ....+....+.+.|. .++..
T Consensus 82 ~~-~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 82 IQ-ASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp HH-HHHHHHHHHHHTTCS-EEEEE
T ss_pred hH-HHHHHHHHHHHcCCC-eEEEE
Confidence 01 233455555566665 54443
No 422
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=64.52 E-value=9.9 Score=36.75 Aligned_cols=86 Identities=16% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 120 LPSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 120 ~~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.-.|++|+=+|+|. |.... ...|++|+++|+++.....+...+..+. +++++ -...|+|+..-.-.|+-+
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv--~LeEl---L~~ADIVv~atgt~~lI~- 317 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV--TLDDA---ASTADIVVTTTGNKDVIT- 317 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC--CHHHH---GGGCSEEEECCSSSSSBC-
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec--cHHHH---HhhCCEEEECCCCccccC-
Confidence 45789999999997 66432 2567899999999976555555555432 33322 134698887432233333
Q ss_pred HHHHHHHHHHHHccccCcEEEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
++....+|||++|+-.
T Consensus 318 -------~e~l~~MK~GAILINv 333 (464)
T 3n58_A 318 -------IDHMRKMKDMCIVGNI 333 (464)
T ss_dssp -------HHHHHHSCTTEEEEEC
T ss_pred -------HHHHhcCCCCeEEEEc
Confidence 3466778998776543
No 423
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=64.09 E-value=7.3 Score=35.27 Aligned_cols=87 Identities=15% Similarity=0.054 Sum_probs=53.6
Q ss_pred CCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-++++|+=||+|. |.... ...+++|+++|.++...+.+.+.++.... ..++...-...|+|+..-..+ +-+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~--~~~l~~~l~~aDvVi~~~p~~-~i~-- 229 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH--TDELKEHVKDIDICINTIPSM-ILN-- 229 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE--GGGHHHHSTTCSEEEECCSSC-CBC--
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc--hhhHHHHhhCCCEEEECCChh-hhC--
Confidence 3578999999987 55322 14567999999999776655555554331 222211124579999876664 333
Q ss_pred HHHHHHHHHHHccccCcEEEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
. +....+|||+.++-.
T Consensus 230 -~-----~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 230 -Q-----TVLSSMTPKTLILDL 245 (300)
T ss_dssp -H-----HHHTTSCTTCEEEEC
T ss_pred -H-----HHHHhCCCCCEEEEE
Confidence 1 234678998765443
No 424
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=63.36 E-value=8.4 Score=34.68 Aligned_cols=84 Identities=21% Similarity=0.244 Sum_probs=53.1
Q ss_pred CEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHH
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRK 199 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~ 199 (377)
.+|.=||+|. |... . ...+.+|+++|.++..++...+.++... .+..+. -...|+|+.. +++.....
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~~~~~---~~~aDvvi~~-----vp~~~~~~ 74 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA-RSARDA---VQGADVVISM-----LPASQHVE 74 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-SSHHHH---HTTCSEEEEC-----CSCHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEc-CCHHHH---HhCCCeEEEE-----CCCHHHHH
Confidence 5788899997 5532 2 1456799999999999888877765432 111111 1245888774 44433345
Q ss_pred HHHH---HHHHccccCcEEE
Q 017080 200 KAIE---ELVRVVKKGSLVL 216 (377)
Q Consensus 200 ~~l~---~~~r~LkpgG~l~ 216 (377)
.++. ++...++||..++
T Consensus 75 ~v~~~~~~~~~~l~~~~~vi 94 (302)
T 2h78_A 75 GLYLDDDGLLAHIAPGTLVL 94 (302)
T ss_dssp HHHHSSSCGGGSSCSSCEEE
T ss_pred HHHcCchhHHhcCCCCcEEE
Confidence 6666 6777888876543
No 425
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=63.11 E-value=4.6 Score=37.88 Aligned_cols=88 Identities=8% Similarity=0.020 Sum_probs=54.9
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
...+|.=||+|. |.... ...+.+|+++|.++..++.+.+.++... .+..++--.....|+|+..-.-. .
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~-~s~~e~~~~a~~~DvVi~~vp~~---~--- 93 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGA-RSIEEFCAKLVKPRVVWLMVPAA---V--- 93 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCC-SSHHHHHHHSCSSCEEEECSCGG---G---
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEe-CCHHHHHhcCCCCCEEEEeCCHH---H---
Confidence 346899999987 55322 1456899999999998888776654321 11111100012348888754322 1
Q ss_pred HHHHHHHHHHccccCcEEE
Q 017080 198 RKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 198 ~~~~l~~~~r~LkpgG~l~ 216 (377)
...++.++...|+||..++
T Consensus 94 v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 94 VDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp HHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 6678889999998876543
No 426
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=62.85 E-value=25 Score=32.05 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=62.1
Q ss_pred CCEEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC----CCCCceeEEEeccchhhcCC
Q 017080 123 GSLVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP----YRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~~ 194 (377)
..+|+=+|+|. |... +. ..+. |+.+|.++..++ +++.++.++.+|+.+.. ..-...|.|++.. ++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~-----~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL-----ES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC-----SS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC-----Cc
Confidence 45899999876 4432 22 3466 999999999999 88788999999987632 2235678888752 34
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
++ .........+.+.|...++....
T Consensus 188 d~-~n~~~~~~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 188 DS-ETIHCILGIRKIDESVRIIAEAE 212 (336)
T ss_dssp HH-HHHHHHHHHHTTCTTSEEEEECS
T ss_pred cH-HHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 45556667778888777666543
No 427
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=62.33 E-value=17 Score=33.04 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=51.7
Q ss_pred CEEEEECCcc-Cccc-c--cCCC-ceEEEEeCCH-------HHHHHHHHcCCeEEEe-eCCCCCCCCCceeEEEeccchh
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPD-CFFVGCDISP-------SLIKICVDRGHEVLVA-DAVNLPYRSDFGDAAISIAVLH 190 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~-~~v~gvD~s~-------~~~~~a~~~~~~~~~~-d~~~~~~~~~~fD~V~~~~~l~ 190 (377)
.+|.=||+|. |.-+ . ...+ .+|+++|.++ ...+.+.+.++ .. +..+. -...|+|+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~s~~e~---~~~aDvVi~a---- 94 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EPLDDVAG---IACADVVLSL---- 94 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEESSGGG---GGGCSEEEEC----
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CCCCHHHH---HhcCCEEEEe----
Confidence 5899999987 5532 2 1456 7999999998 45555555565 22 33322 1345888875
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
+++.. ....++++...|+||..++
T Consensus 95 -vp~~~-~~~~~~~i~~~l~~~~ivv 118 (317)
T 4ezb_A 95 -VVGAA-TKAVAASAAPHLSDEAVFI 118 (317)
T ss_dssp -CCGGG-HHHHHHHHGGGCCTTCEEE
T ss_pred -cCCHH-HHHHHHHHHhhcCCCCEEE
Confidence 34433 3456688888898876544
No 428
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=62.08 E-value=7.9 Score=35.76 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=52.7
Q ss_pred hCCCCCCEEEEECCcc--Cccc----ccCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCC-----CCCCCceeEEEec
Q 017080 118 NSLPSGSLVLDAGCGN--GKYL----GLNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNL-----PYRSDFGDAAISI 186 (377)
Q Consensus 118 ~~~~~~~~vLDiGcG~--G~~~----~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~-----~~~~~~fD~V~~~ 186 (377)
..+.+|.+||=.|++. |.++ ....+..|++++ ++...+.++ .+......+-.++ ....+.+|+|+-.
T Consensus 138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~ 215 (349)
T 4a27_A 138 ANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNADYVQEVKRISAEGVDIVLDC 215 (349)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTSCHHHHHHHHCTTCEEEEEEE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCccHHHHHHHhcCCCceEEEEC
Confidence 3567899999999832 5543 223357899998 666666666 5444333221111 0123579998874
Q ss_pred cchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 187 AVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 187 ~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
-. . ..+....+.|+|||++++.-
T Consensus 216 ~g-----~-----~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 216 LC-----G-----DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CC-----------------CTTEEEEEEEEEEC
T ss_pred CC-----c-----hhHHHHHHHhhcCCEEEEEC
Confidence 32 2 12367889999999998764
No 429
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=60.29 E-value=19 Score=30.66 Aligned_cols=70 Identities=21% Similarity=0.124 Sum_probs=48.3
Q ss_pred CCCEEEEECCcc--Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCC-eEEEeeCCC-CCCCCCceeEEEeccchhh
Q 017080 122 SGSLVLDAGCGN--GKYL-G--LNPDCFFVGCDISPSLIKICVDRGH-EVLVADAVN-LPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 122 ~~~~vLDiGcG~--G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~d~~~-~~~~~~~fD~V~~~~~l~h 191 (377)
.+++||=.|+.. |..+ . ...+.+|++++.++...+.....++ .++.+|+.+ +.-.-+..|+|+.......
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCC
Confidence 467999998744 3322 2 1457899999999987777666678 999999962 2211246899988776543
No 430
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=59.27 E-value=12 Score=34.24 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=47.3
Q ss_pred CEEEEECCccCcccc--cCCCc-eEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCC-CCceeEEEeccc
Q 017080 124 SLVLDAGCGNGKYLG--LNPDC-FFVGCDISPSLIKICVDR-GHEVLVADAVNLPYR-SDFGDAAISIAV 188 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~--~~~~~-~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~-~~~fD~V~~~~~ 188 (377)
++|||+=||.|.+.. ...|. -+.++|+++.+.+.-+.+ .-.++.+|+.++... -...|+++...-
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCC
Confidence 479999999998742 13345 456899999999887776 567788999886421 245899887543
No 431
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=58.86 E-value=10 Score=34.56 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=54.5
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
...+|.=||+|. |.... ...+.+|+++|.++...+...+.++.+. .+..+. -...|+|+.. +++...
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-~~~~e~---~~~aDvVi~~-----vp~~~~ 100 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-EQARAA---ARDADIVVSM-----LENGAV 100 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-SSHHHH---HTTCSEEEEC-----CSSHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-CCHHHH---HhcCCEEEEE-----CCCHHH
Confidence 346899999997 55322 1456799999999998888777665432 122111 1235888774 454332
Q ss_pred HHHHHH--HHHHccccCcEEEE
Q 017080 198 RKKAIE--ELVRVVKKGSLVLI 217 (377)
Q Consensus 198 ~~~~l~--~~~r~LkpgG~l~i 217 (377)
...++. .+...++||..++-
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~ 122 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLD 122 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEE
T ss_pred HHHHHcchhHHhhCCCCCEEEe
Confidence 455555 66677888765443
No 432
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=58.76 E-value=13 Score=32.50 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=62.2
Q ss_pred CCCEEEEECCccCcc---cc--cCCCceEEEEeCCHHHHHHHHHc---CCeEEEeeCCCCCC----------CCCceeEE
Q 017080 122 SGSLVLDAGCGNGKY---LG--LNPDCFFVGCDISPSLIKICVDR---GHEVLVADAVNLPY----------RSDFGDAA 183 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~---~~--~~~~~~v~gvD~s~~~~~~a~~~---~~~~~~~d~~~~~~----------~~~~fD~V 183 (377)
.++++|=.|++.|.- +. ...+++|+.+|.++..++...+. ++.++.+|+.+..- .-+..|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467899999887762 22 15678999999998877655443 57788889876420 01478998
Q ss_pred EeccchhhcC-----ChHHHH-----------HHHHHHHHccccCcEEEEE
Q 017080 184 ISIAVLHHLS-----TESRRK-----------KAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 184 ~~~~~l~h~~-----~~~~~~-----------~~l~~~~r~LkpgG~l~i~ 218 (377)
+.+..+.... +.+++. .+.+.+...++++|.++..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 8876543321 222232 2345566667778877665
No 433
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=58.47 E-value=14 Score=32.47 Aligned_cols=85 Identities=11% Similarity=0.138 Sum_probs=52.6
Q ss_pred CCEEEEECCcc-Cccc-cc--CCCce-EEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 123 GSLVLDAGCGN-GKYL-GL--NPDCF-FVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~~--~~~~~-v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
+.+|.=||+|. |... .. ..+.+ |+.+|.++...+...+. ++.. ..|..+. -...|+|+..- ++..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~---~~~~Dvvi~av-----~~~~ 80 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-TTDLAEV---NPYAKLYIVSL-----KDSA 80 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-ESCGGGS---CSCCSEEEECC-----CHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-eCCHHHH---hcCCCEEEEec-----CHHH
Confidence 35799999986 5532 11 23455 89999999988776665 5543 2233222 13469888853 3322
Q ss_pred HHHHHHHHHHHccccCcEEEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
...+++++...+++|.. ++.
T Consensus 81 -~~~v~~~l~~~~~~~~i-vv~ 100 (266)
T 3d1l_A 81 -FAELLQGIVEGKREEAL-MVH 100 (266)
T ss_dssp -HHHHHHHHHTTCCTTCE-EEE
T ss_pred -HHHHHHHHHhhcCCCcE-EEE
Confidence 45677788777877654 444
No 434
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=58.36 E-value=12 Score=35.92 Aligned_cols=38 Identities=21% Similarity=0.178 Sum_probs=27.7
Q ss_pred CCEEEEECCccCcccc-------c-C-CCceEEEEeCCHHHHHHHHH
Q 017080 123 GSLVLDAGCGNGKYLG-------L-N-PDCFFVGCDISPSLIKICVD 160 (377)
Q Consensus 123 ~~~vLDiGcG~G~~~~-------~-~-~~~~v~gvD~s~~~~~~a~~ 160 (377)
.-+|+|+|.|+|.++. . . ...+++.||+|+.+.+.-++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~ 184 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRE 184 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHH
Confidence 3699999999999642 1 1 12389999999987655443
No 435
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=57.87 E-value=22 Score=32.33 Aligned_cols=90 Identities=19% Similarity=0.163 Sum_probs=55.5
Q ss_pred CCCEEEEECCcc-Cccccc---CCCceEEEEeCCHHHHHHHHHcCCeEEEee--------CCCCCCCCCceeEEEeccch
Q 017080 122 SGSLVLDAGCGN-GKYLGL---NPDCFFVGCDISPSLIKICVDRGHEVLVAD--------AVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d--------~~~~~~~~~~fD~V~~~~~l 189 (377)
...+|.=||+|. |..... ..+.+|+.+ ..+..++..++.++.....+ +...+-.-..+|+|+..---
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilavk~ 96 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCVKS 96 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEECCCG
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEEccc
Confidence 346899999997 654321 356789999 88888888877654332100 00001112468988875322
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
. . ...+++++...++|+..++..
T Consensus 97 ~-----~-~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 97 T-----D-TQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp G-----G-HHHHHHHHTTTSCTTCEEEEE
T ss_pred c-----c-HHHHHHHHHHhcCCCCEEEEe
Confidence 2 2 578899999999988665444
No 436
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=57.47 E-value=6.8 Score=36.17 Aligned_cols=85 Identities=8% Similarity=0.004 Sum_probs=54.3
Q ss_pred CEEEEE-CCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCC--------CCceeEEEeccchh
Q 017080 124 SLVLDA-GCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYR--------SDFGDAAISIAVLH 190 (377)
Q Consensus 124 ~~vLDi-GcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~--------~~~fD~V~~~~~l~ 190 (377)
.+||=. |+|. |.++. ...+++|+++|.++..++.+++.+..... |..+..+. ...+|+|+-...-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~v~~~~~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVL-NEKAPDFEATLREVMKAEQPRIFLDAVTG- 243 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEE-ETTSTTHHHHHHHHHHHHCCCEEEESSCH-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEE-ECCcHHHHHHHHHHhcCCCCcEEEECCCC-
Confidence 566654 3332 44432 24577999999999999999887655433 33222111 1368998875432
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
..+..+.+.|+|||.+++.-
T Consensus 244 ---------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 244 ---------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp ---------HHHHHHHHHSCTTCEEEECC
T ss_pred ---------hhHHHHHhhhcCCCEEEEEe
Confidence 23467789999999988764
No 437
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=57.26 E-value=8.9 Score=34.32 Aligned_cols=83 Identities=23% Similarity=0.292 Sum_probs=51.3
Q ss_pred CEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHH
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRK 199 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~ 199 (377)
.+|.=||+|. |... . ...+.+|+++|.++...+...+.++... .+..+. -...|+|+.. +++.....
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~---~~~~D~vi~~-----v~~~~~~~ 76 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA-STAKAI---AEQCDVIITM-----LPNSPHVK 76 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-SSHHHH---HHHCSEEEEC-----CSSHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeec-CCHHHH---HhCCCEEEEE-----CCCHHHHH
Confidence 4799999987 5432 1 1346789999999998887777655421 111110 1246888775 44322244
Q ss_pred HHH---HHHHHccccCcEE
Q 017080 200 KAI---EELVRVVKKGSLV 215 (377)
Q Consensus 200 ~~l---~~~~r~LkpgG~l 215 (377)
.++ +++...++||..+
T Consensus 77 ~~~~~~~~l~~~l~~~~~v 95 (299)
T 1vpd_A 77 EVALGENGIIEGAKPGTVL 95 (299)
T ss_dssp HHHHSTTCHHHHCCTTCEE
T ss_pred HHHhCcchHhhcCCCCCEE
Confidence 556 5677888888754
No 438
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=56.68 E-value=14 Score=35.44 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=53.1
Q ss_pred CCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-.|.+|.=+|.|. |.-.. ...|++|+++|+++.....+...+..+. ++.++ -...|+|+....-.++-+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~--sL~ea---l~~ADVVilt~gt~~iI~-- 281 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL--LVEDV---VEEAHIFVTTTGNDDIIT-- 281 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--CHHHH---TTTCSEEEECSSCSCSBC--
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec--CHHHH---HhhCCEEEECCCCcCccC--
Confidence 4688999999988 65332 2457899999999987766666665432 33322 234698887443333333
Q ss_pred HHHHHHHHHHHccccCcEEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i 217 (377)
.+..+.+|||.+++-
T Consensus 282 ------~e~l~~MK~gAIVIN 296 (436)
T 3h9u_A 282 ------SEHFPRMRDDAIVCN 296 (436)
T ss_dssp ------TTTGGGCCTTEEEEE
T ss_pred ------HHHHhhcCCCcEEEE
Confidence 135667888865443
No 439
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=56.32 E-value=20 Score=33.04 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=52.4
Q ss_pred hCCCCCCEEEEECC-c-cCcccc---cCCCceEEEE-eCCH---HHHHHHHHcCCeEEEee----CCCCC-CCC--Ccee
Q 017080 118 NSLPSGSLVLDAGC-G-NGKYLG---LNPDCFFVGC-DISP---SLIKICVDRGHEVLVAD----AVNLP-YRS--DFGD 181 (377)
Q Consensus 118 ~~~~~~~~vLDiGc-G-~G~~~~---~~~~~~v~gv-D~s~---~~~~~a~~~~~~~~~~d----~~~~~-~~~--~~fD 181 (377)
..+.+|.+||=+|+ | .|.++. ...+++++++ +.++ ...+.+++.+....... ...+. ... +.+|
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~D 242 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPR 242 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCS
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCce
Confidence 35778999999997 3 366532 2456666554 4443 24567777665543221 11111 111 2489
Q ss_pred EEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 182 AAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 182 ~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+|+-.-. . .. +.+..+.|+|||.+++.
T Consensus 243 vvid~~g-----~----~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 243 LALNCVG-----G----KS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp EEEESSC-----H----HH-HHHHHTTSCTTCEEEEC
T ss_pred EEEECCC-----c----HH-HHHHHHhhCCCCEEEEE
Confidence 8876432 2 12 24578999999998775
No 440
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=55.47 E-value=7 Score=35.96 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=34.9
Q ss_pred eEE-EeeCCC-C-CCCCCceeEEEeccchhh----c---CC-hHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 164 EVL-VADAVN-L-PYRSDFGDAAISIAVLHH----L---ST-ESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 164 ~~~-~~d~~~-~-~~~~~~fD~V~~~~~l~h----~---~~-~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
.++ .+|... + .+++++||+|++.=-..- . .+ .+.....|.++.++|+|||.+++..-
T Consensus 40 ~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 40 HVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 345 666644 1 244678888887422110 0 01 01156788899999999999998754
No 441
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=54.57 E-value=25 Score=31.91 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=52.6
Q ss_pred CEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHcCCeEEE---eeC--------CCCCCCCCceeEEEeccc
Q 017080 124 SLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDRGHEVLV---ADA--------VNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~d~--------~~~~~~~~~fD~V~~~~~ 188 (377)
++|+=||+|. |.... . ..+.+|+.++.++ .+..++.++.+.. ++. .+.......+|+|+..--
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 4789999997 55432 1 3467999999987 2555555443321 000 011111236899988654
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
-..+. .+++.+...++|+..++..
T Consensus 81 ~~~~~------~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 81 VVEGA------DRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp CCTTC------CHHHHHTTSCCTTCEEEEE
T ss_pred CCChH------HHHHHHHhhcCCCCEEEEe
Confidence 44443 4678888899988765544
No 442
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=53.55 E-value=9.8 Score=30.00 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=47.6
Q ss_pred CCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHH-HHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 123 GSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKI-CVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~-a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
+.+|+=||+|. |... . ...+.+|+.+|.++...+. +.+.+..... ..++.-.-...|+|+..-...+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~Divi~at~~~~~~---- 94 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVL--INDIDSLIKNNDVIITATSSKTPI---- 94 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEE--CSCHHHHHHTCSEEEECSCCSSCS----
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEe--ecCHHHHhcCCCEEEEeCCCCCcE----
Confidence 78999999986 5432 2 1356779999999987755 4444544332 222110013579988865443211
Q ss_pred HHHHHHHHHHccccCcEEEE
Q 017080 198 RKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 198 ~~~~l~~~~r~LkpgG~l~i 217 (377)
+. ...|+||+.++-
T Consensus 95 ----~~--~~~l~~g~~vid 108 (144)
T 3oj0_A 95 ----VE--ERSLMPGKLFID 108 (144)
T ss_dssp ----BC--GGGCCTTCEEEE
T ss_pred ----ee--HHHcCCCCEEEE
Confidence 11 245778765543
No 443
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=53.31 E-value=46 Score=31.03 Aligned_cols=93 Identities=12% Similarity=-0.047 Sum_probs=54.4
Q ss_pred CCCEEEEECCccCcccccCCCceEEEEeCCHHHHHHHHHc----CCe---EEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 122 SGSLVLDAGCGNGKYLGLNPDCFFVGCDISPSLIKICVDR----GHE---VLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~~~~~~~~v~gvD~s~~~~~~a~~~----~~~---~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
.+.+||.|+-+.|.++-......++.+.=|-......+.+ ++. +...+..+ -..+.||+|+.... +.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~lp----k~ 111 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA--DYPQQPGVVLIKVP----KT 111 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS--CCCSSCSEEEEECC----SC
T ss_pred CCCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc--ccccCCCEEEEEcC----CC
Confidence 4568999999999865322223445553344433333332 221 22222222 22467899888532 22
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEEc
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITVW 220 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~~ 220 (377)
.......|..+...|+||+.+++..-
T Consensus 112 ~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 112 LALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp HHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 22367888999999999999977654
No 444
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=52.34 E-value=7.8 Score=34.67 Aligned_cols=84 Identities=13% Similarity=0.147 Sum_probs=52.8
Q ss_pred CEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHH
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRK 199 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~ 199 (377)
++|.=||+|. |... . ...+.+|++.|.++...+...+.++... .+..+. -...|+|+.. +++.....
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~---~~~aDvvi~~-----vp~~~~~~ 72 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-ATPCEV---VESCPVTFAM-----LADPAAAE 72 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-SSHHHH---HHHCSEEEEC-----CSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-CCHHHH---HhcCCEEEEE-----cCCHHHHH
Confidence 4788899987 5532 2 1456799999999998888777655432 111111 1235888764 45433355
Q ss_pred HHH---HHHHHccccCcEEE
Q 017080 200 KAI---EELVRVVKKGSLVL 216 (377)
Q Consensus 200 ~~l---~~~~r~LkpgG~l~ 216 (377)
.++ +++...++||..++
T Consensus 73 ~v~~~~~~l~~~l~~~~~vi 92 (287)
T 3pef_A 73 EVCFGKHGVLEGIGEGRGYV 92 (287)
T ss_dssp HHHHSTTCHHHHCCTTCEEE
T ss_pred HHHcCcchHhhcCCCCCEEE
Confidence 666 77778888876543
No 445
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=51.84 E-value=16 Score=33.49 Aligned_cols=89 Identities=15% Similarity=0.148 Sum_probs=53.5
Q ss_pred CEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHc-CCeEEEe----------eCCCCCCCCCceeEEEeccc
Q 017080 124 SLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDR-GHEVLVA----------DAVNLPYRSDFGDAAISIAV 188 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~----------d~~~~~~~~~~fD~V~~~~~ 188 (377)
.+|.=||+|. |.... . ..+.+|+++|.++..++..++. ++.+... ...++...-..+|+|+..--
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 5899999987 55322 1 3567899999999888777665 3221100 00011000135798887543
Q ss_pred hhhcCChHHHHHHHHHHHHccccCcEEEEE
Q 017080 189 LHHLSTESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 189 l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
-. . ...+++++...+++|..++..
T Consensus 85 ~~-----~-~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AI-----H-HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp GG-----G-HHHHHHHHGGGCCTTCEEEES
T ss_pred ch-----H-HHHHHHHHHHhCCCCCEEEEc
Confidence 22 2 357788888889987654443
No 446
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=51.16 E-value=2.7 Score=38.54 Aligned_cols=86 Identities=19% Similarity=0.163 Sum_probs=50.4
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
.|++|.=||+|. |.-. . ...+.+|+++|.++.. +.+.+.++... +..++ -...|+|+..-.+.- .
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~--~l~el---l~~aDvV~l~~p~~~--~--- 209 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV--DLETL---LKESDVVTIHVPLVE--S--- 209 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC--CHHHH---HHHCSEEEECCCCST--T---
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc--CHHHH---HhhCCEEEEecCCCh--H---
Confidence 578999999987 6532 2 1457899999998866 44555555432 32221 124688887543211 0
Q ss_pred HHHHH-HHHHHccccCcEEEEE
Q 017080 198 RKKAI-EELVRVVKKGSLVLIT 218 (377)
Q Consensus 198 ~~~~l-~~~~r~LkpgG~l~i~ 218 (377)
...++ .+....+|||+.++-.
T Consensus 210 t~~li~~~~l~~mk~ga~lin~ 231 (307)
T 1wwk_A 210 TYHLINEERLKLMKKTAILINT 231 (307)
T ss_dssp TTTCBCHHHHHHSCTTCEEEEC
T ss_pred HhhhcCHHHHhcCCCCeEEEEC
Confidence 11222 3455678998765443
No 447
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=50.87 E-value=15 Score=27.19 Aligned_cols=66 Identities=18% Similarity=0.092 Sum_probs=44.8
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCC-ceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-C--CCCceeEEEecc
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPD-CFFVGCDISPSLIKICVDRGHEVLVADAVNLP-Y--RSDFGDAAISIA 187 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-~--~~~~fD~V~~~~ 187 (377)
.+.+|+=+|+|. |..+ . ...+ .+|+++|.++..++.....++.+...|..+.. + .-..+|+|+...
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 346899999964 4432 1 1345 79999999999888777667888888876521 0 013578888765
No 448
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=50.02 E-value=49 Score=32.24 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=52.5
Q ss_pred CCCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-.|++|+=+|+|. |... . ...|++|+.+|+++.....+...+.. ..+..+. ....|+|+....-.++-+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d--v~~lee~---~~~aDvVi~atG~~~vl~-- 335 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ--VLTLEDV---VSEADIFVTTTGNKDIIM-- 335 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE--ECCGGGT---TTTCSEEEECSSCSCSBC--
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc--cCCHHHH---HHhcCEEEeCCCChhhhh--
Confidence 4688999999982 2222 1 24678999999999877777666543 2233332 345798876543333322
Q ss_pred HHHHHHHHHHHccccCcEEEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
.+..+.+|+|+.++-.
T Consensus 336 ------~e~l~~mk~gaiVvNa 351 (488)
T 3ond_A 336 ------LDHMKKMKNNAIVCNI 351 (488)
T ss_dssp ------HHHHTTSCTTEEEEES
T ss_pred ------HHHHHhcCCCeEEEEc
Confidence 2246678998865543
No 449
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=49.40 E-value=5.7 Score=36.85 Aligned_cols=86 Identities=16% Similarity=0.074 Sum_probs=51.0
Q ss_pred CCCCEEEEECCcc-Ccc-cc--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKY-LG--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~-~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-.|++|.=||.|. |.- +. ...+.+|++.|+++.. +.+...++.. .++.++ -...|+|+..-.+..-
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~--~~l~el---l~~aDvV~l~~P~t~~---- 232 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ--LPLEEI---WPLCDFITVHTPLLPS---- 232 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE--CCHHHH---GGGCSEEEECCCCCTT----
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee--CCHHHH---HhcCCEEEEecCCCHH----
Confidence 3578999999987 653 22 2567899999998754 3444555543 232221 1346998885433210
Q ss_pred HHHHHH-HHHHHccccCcEEEE
Q 017080 197 RRKKAI-EELVRVVKKGSLVLI 217 (377)
Q Consensus 197 ~~~~~l-~~~~r~LkpgG~l~i 217 (377)
...++ ++....+|||++++-
T Consensus 233 -t~~li~~~~l~~mk~gailIN 253 (335)
T 2g76_A 233 -TTGLLNDNTFAQCKKGVRVVN 253 (335)
T ss_dssp -TTTSBCHHHHTTSCTTEEEEE
T ss_pred -HHHhhCHHHHhhCCCCcEEEE
Confidence 11223 456778999875443
No 450
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=49.11 E-value=15 Score=35.47 Aligned_cols=90 Identities=12% Similarity=0.086 Sum_probs=60.2
Q ss_pred CCEEEEECCcc-Cccccc---CCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCC----CCCCceeEEEeccchhhcC
Q 017080 123 GSLVLDAGCGN-GKYLGL---NPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLP----YRSDFGDAAISIAVLHHLS 193 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~~---~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~----~~~~~fD~V~~~~~l~h~~ 193 (377)
.++|+=+|||. |..+.. ..+.+|+.+|.++..++.+.+. ++..+.+|+.+.. -.-+..|++++. ..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~-----t~ 77 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV-----TN 77 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC-----CS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE-----cC
Confidence 57899999998 765432 4677999999999999887765 8899999998742 112567888763 22
Q ss_pred ChHHHHHHHHHHHHccccCcEEEEE
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i~ 218 (377)
+++ ..-+...+++.+.|.-.++..
T Consensus 78 ~De-~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 78 TDE-TNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp CHH-HHHHHHHHHHHHHCCSSEEEE
T ss_pred ChH-HHHHHHHHHHHhcCCccceeE
Confidence 322 344555556666444444433
No 451
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=48.32 E-value=9.6 Score=34.60 Aligned_cols=86 Identities=16% Similarity=0.086 Sum_probs=52.7
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
...+|.=||+|. |... . ...+.+|++.|.++..++...+.++.+. .+..+. -...|+|+.. +++...
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-~~~~~~---~~~aDvvi~~-----vp~~~~ 90 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVC-ESPAEV---IKKCKYTIAM-----LSDPCA 90 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-SSHHHH---HHHCSEEEEC-----CSSHHH
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEc-CCHHHH---HHhCCEEEEE-----cCCHHH
Confidence 346899999997 5532 2 1456799999999998887776665431 111110 1235888774 444322
Q ss_pred HHHHH---HHHHHccccCcEEE
Q 017080 198 RKKAI---EELVRVVKKGSLVL 216 (377)
Q Consensus 198 ~~~~l---~~~~r~LkpgG~l~ 216 (377)
...++ +.+...+++|..++
T Consensus 91 ~~~v~~~~~~l~~~l~~g~~vv 112 (310)
T 3doj_A 91 ALSVVFDKGGVLEQICEGKGYI 112 (310)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEE
T ss_pred HHHHHhCchhhhhccCCCCEEE
Confidence 44555 56667778775543
No 452
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=47.67 E-value=13 Score=39.59 Aligned_cols=95 Identities=25% Similarity=0.261 Sum_probs=63.8
Q ss_pred CCCCEEEEECCcc-Cccccc-CCCceEEEEeCCHHHHHHHHH-cCCeEEEeeCCCCC-CCCCceeEEEeccchhhc----
Q 017080 121 PSGSLVLDAGCGN-GKYLGL-NPDCFFVGCDISPSLIKICVD-RGHEVLVADAVNLP-YRSDFGDAAISIAVLHHL---- 192 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~~-~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~d~~~~~-~~~~~fD~V~~~~~l~h~---- 192 (377)
..+.++||+|+|. -+.+.. -+...|+.+|+=|-.-..+.= -.-.|++.|..... .-...+|.|.|...|..-
T Consensus 820 ~~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A~a 899 (1289)
T 1ej6_A 820 YDGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAAGK 899 (1289)
T ss_dssp CTTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHHHH
T ss_pred cccceEEEccCCCcceeeeecCCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhhhcc
Confidence 4678999999998 445555 455699999975432110000 03568888887643 334678999999988753
Q ss_pred -CChHHHHHHHHHHHHccccCcE--EEEE
Q 017080 193 -STESRRKKAIEELVRVVKKGSL--VLIT 218 (377)
Q Consensus 193 -~~~~~~~~~l~~~~r~LkpgG~--l~i~ 218 (377)
.+ ..+.++++.+.+++.|. +++.
T Consensus 900 ~~t---l~~~~~q~l~~~~~~~~~~l~lQ 925 (1289)
T 1ej6_A 900 SMT---FDAAFQQLIKVLSKSTANVVLVQ 925 (1289)
T ss_dssp TCC---HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCc---HHHHHHHHHHHHHhcCccEEEEE
Confidence 23 77889999888877764 4444
No 453
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=47.63 E-value=10 Score=35.00 Aligned_cols=83 Identities=19% Similarity=0.159 Sum_probs=52.3
Q ss_pred CCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHH-HHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 123 GSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSL-IKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~-~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
+.+|.=||+|. |... . ...+.+|++.|.++.. .+.+.+.++... +..+. -...|+|+..- ++..
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~--~~~e~---~~~aDvVilav-----p~~~- 84 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--DVKTA---VAAADVVMILT-----PDEF- 84 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--CHHHH---HHTCSEEEECS-----CHHH-
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc--cHHHH---HhcCCEEEEeC-----CcHH-
Confidence 45799999998 5532 2 1345689999998754 677777676543 33221 12468888753 3322
Q ss_pred HHHHHH-HHHHccccCcEEE
Q 017080 198 RKKAIE-ELVRVVKKGSLVL 216 (377)
Q Consensus 198 ~~~~l~-~~~r~LkpgG~l~ 216 (377)
...++. ++...|+||..++
T Consensus 85 ~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 85 QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHHHHHHHTGGGCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCCEEE
Confidence 356776 7878888886555
No 454
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=46.90 E-value=74 Score=30.57 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=53.6
Q ss_pred CCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHc-----------C---------C-eEEEeeCCCCCCCC
Q 017080 123 GSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDR-----------G---------H-EVLVADAVNLPYRS 177 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~-----------~---------~-~~~~~d~~~~~~~~ 177 (377)
-.+|.=||+|+ |.-. . ...+.+|+++|.++..++.+.+. + . .-+..|.+. -
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~----~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE----L 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGG----G
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHH----H
Confidence 35899999998 5532 2 25678999999999887766541 0 0 112223221 2
Q ss_pred CceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 178 DFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 178 ~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
...|+|+..-. .+.+-...+++++...++|+.+++.
T Consensus 113 ~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 STVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 34688887542 1211135788889999988866543
No 455
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=46.67 E-value=18 Score=33.31 Aligned_cols=91 Identities=13% Similarity=0.170 Sum_probs=54.3
Q ss_pred CCCCC-CEEEEECC-cc-Ccccc---cCCCceEEEEeCCHHH----HHHHHHcCCeEEEeeC----CCCC-----C---C
Q 017080 119 SLPSG-SLVLDAGC-GN-GKYLG---LNPDCFFVGCDISPSL----IKICVDRGHEVLVADA----VNLP-----Y---R 176 (377)
Q Consensus 119 ~~~~~-~~vLDiGc-G~-G~~~~---~~~~~~v~gvD~s~~~----~~~a~~~~~~~~~~d~----~~~~-----~---~ 176 (377)
.+.+| .+||=+|+ |. |.++. ...+++++++.-++.. .+.+++.+.......- .++. . .
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhcc
Confidence 56788 99999997 33 65432 2457788888654432 4566665654332111 1110 0 1
Q ss_pred CCceeEEEeccchhhcCChHHHHHHHHHHHHccccCcEEEEEE
Q 017080 177 SDFGDAAISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 177 ~~~fD~V~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.+.+|+|+-.-. . .... ...+.|++||.+++.-
T Consensus 243 ~~g~Dvvid~~G-----~----~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 243 GGEAKLALNCVG-----G----KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp TCCEEEEEESSC-----H----HHHH-HHHHTSCTTCEEEECC
T ss_pred CCCceEEEECCC-----c----hhHH-HHHHHhccCCEEEEec
Confidence 346899886532 1 2233 6779999999988754
No 456
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=46.17 E-value=29 Score=30.99 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=64.1
Q ss_pred CCCEEEEECCccCccc---c--cCCCceEEEEeCCHHHHHHHHHc---CCeEEEeeCCCCC----------CCCCceeEE
Q 017080 122 SGSLVLDAGCGNGKYL---G--LNPDCFFVGCDISPSLIKICVDR---GHEVLVADAVNLP----------YRSDFGDAA 183 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~~---~--~~~~~~v~gvD~s~~~~~~a~~~---~~~~~~~d~~~~~----------~~~~~fD~V 183 (377)
.|+.+|=-|++.|.-. . ...|++|+.+|.+++.++.+.+. ++.++.+|+.+.. -.-+..|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999888732 2 26788999999999888765543 4677888887632 012678998
Q ss_pred EeccchhhcC-----ChHHHH-----------HHHHHHHHccccCcEEEEE
Q 017080 184 ISIAVLHHLS-----TESRRK-----------KAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 184 ~~~~~l~h~~-----~~~~~~-----------~~l~~~~r~LkpgG~l~i~ 218 (377)
+.+..+.... +.+++. .+.+.+...++.+|.++..
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 8876543321 122233 3345566677778876655
No 457
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=44.79 E-value=34 Score=32.92 Aligned_cols=91 Identities=11% Similarity=-0.032 Sum_probs=52.3
Q ss_pred CEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCe------------------E-EEeeCCCCCCCCCce
Q 017080 124 SLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHE------------------V-LVADAVNLPYRSDFG 180 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~------------------~-~~~d~~~~~~~~~~f 180 (377)
++|.=||+|. |..+. ...+.+|+++|+++..++...+.... + ...|..+. -...
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea---~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQA---VPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHH---GGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHH---HhcC
Confidence 4788899987 55322 14567999999999988776653111 1 11111110 1245
Q ss_pred eEEEeccchh----hcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 181 DAAISIAVLH----HLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 181 D~V~~~~~l~----h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
|+|+..-.-. .-+|-.....+++.+...|++|-.++.
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~ 120 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVT 120 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEE
Confidence 8777643211 011111267888899999988755443
No 458
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=43.64 E-value=38 Score=30.07 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=52.0
Q ss_pred CEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHc-------------C------------CeEEEeeCCCCC
Q 017080 124 SLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDR-------------G------------HEVLVADAVNLP 174 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~-------------~------------~~~~~~d~~~~~ 174 (377)
.+|.=||+|+ |.-. . ...+.+|+.+|.++..++.+.+. + +.+ ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~- 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA- 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH-
Confidence 4788899987 5432 2 14578999999999988776643 1 121 2222111
Q ss_pred CCCCceeEEEeccchhhcCCh-HHHHHHHHHHHHccccCcEE
Q 017080 175 YRSDFGDAAISIAVLHHLSTE-SRRKKAIEELVRVVKKGSLV 215 (377)
Q Consensus 175 ~~~~~fD~V~~~~~l~h~~~~-~~~~~~l~~~~r~LkpgG~l 215 (377)
-...|+|+.. ++.. +....+++++...++|+..+
T Consensus 83 --~~~aDlVi~a-----v~~~~~~~~~v~~~l~~~~~~~~il 117 (283)
T 4e12_A 83 --VKDADLVIEA-----VPESLDLKRDIYTKLGELAPAKTIF 117 (283)
T ss_dssp --TTTCSEEEEC-----CCSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred --hccCCEEEEe-----ccCcHHHHHHHHHHHHhhCCCCcEE
Confidence 1346888775 3332 12567889999999987654
No 459
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=43.46 E-value=27 Score=34.13 Aligned_cols=83 Identities=17% Similarity=0.197 Sum_probs=51.1
Q ss_pred CCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-.|++|.=||.|. |.-.. ...+++|+++|+++.....+...+..+ .++.++ -...|+|+..-.-.++-+
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~--~~l~el---l~~aDiVi~~~~t~~lI~-- 347 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV--VTMEYA---ADKADIFVTATGNYHVIN-- 347 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE--CCHHHH---TTTCSEEEECSSSSCSBC--
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe--CCHHHH---HhcCCEEEECCCcccccC--
Confidence 4678999999887 55332 256789999999997643444434443 233222 234699988743233333
Q ss_pred HHHHHHHHHHHccccCcEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~ 216 (377)
++....+|||.+|+
T Consensus 348 ------~~~l~~MK~gAilI 361 (494)
T 3d64_A 348 ------HDHMKAMRHNAIVC 361 (494)
T ss_dssp ------HHHHHHCCTTEEEE
T ss_pred ------HHHHhhCCCCcEEE
Confidence 34566789976544
No 460
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=42.75 E-value=20 Score=31.95 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=53.4
Q ss_pred CEEEEECCcc-Cccc-c----c-CCCceEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 124 SLVLDAGCGN-GKYL-G----L-NPDCFFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~----~-~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.+|.=||||+ |... . . .+..+|+.+|.++..++...+. ++.... |..+. -...|+|+..- +..
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~-~~~~~---~~~aDvVilav-----~p~ 74 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQ-DNRQG---ALNADVVVLAV-----KPH 74 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEES-CHHHH---HSSCSEEEECS-----CGG
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeC-ChHHH---HhcCCeEEEEe-----CHH
Confidence 5788899997 5422 1 1 1223899999999988887765 665421 21111 12458888764 222
Q ss_pred HHHHHHHHHHHHc-cccCcEEEEEEc
Q 017080 196 SRRKKAIEELVRV-VKKGSLVLITVW 220 (377)
Q Consensus 196 ~~~~~~l~~~~r~-LkpgG~l~i~~~ 220 (377)
. ...+++++... ++++ .++++.-
T Consensus 75 ~-~~~vl~~l~~~~l~~~-~iiiS~~ 98 (280)
T 3tri_A 75 Q-IKMVCEELKDILSETK-ILVISLA 98 (280)
T ss_dssp G-HHHHHHHHHHHHHTTT-CEEEECC
T ss_pred H-HHHHHHHHHhhccCCC-eEEEEec
Confidence 2 67888888887 7765 4555543
No 461
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=42.63 E-value=47 Score=29.04 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=59.2
Q ss_pred CCCEEEEECCccCcc---cc--cCCCceEEEEeCC------------HHHHHHHHH----c--CCeEEEeeCCCCC----
Q 017080 122 SGSLVLDAGCGNGKY---LG--LNPDCFFVGCDIS------------PSLIKICVD----R--GHEVLVADAVNLP---- 174 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~---~~--~~~~~~v~gvD~s------------~~~~~~a~~----~--~~~~~~~d~~~~~---- 174 (377)
.+++||=.|++.|.- +. ...+++|+.+|.+ ...++.... . .+.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 467899999987762 22 1567899999987 444433322 1 4677888887632
Q ss_pred -CC-----CCceeEEEeccchhhc---CChHHHH-----------HHHHHHHHccccCcEEEEE
Q 017080 175 -YR-----SDFGDAAISIAVLHHL---STESRRK-----------KAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 175 -~~-----~~~fD~V~~~~~l~h~---~~~~~~~-----------~~l~~~~r~LkpgG~l~i~ 218 (377)
+. -+..|+++.+..+... .+.+++. .+++.+...++++|.++..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 00 1478998887655332 1222233 3445666777778887665
No 462
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=42.45 E-value=18 Score=35.20 Aligned_cols=84 Identities=23% Similarity=0.172 Sum_probs=52.3
Q ss_pred CCCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-.|++|.=||.|. |.-.. ...+++|+++|+++.....+...++.+ .++.++ -...|+|+..-.-.++-+
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~--~~l~el---l~~aDiVi~~~~t~~lI~-- 327 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV--VTLDEI---VDKGDFFITCTGNVDVIK-- 327 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE--CCHHHH---TTTCSEEEECCSSSSSBC--
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe--cCHHHH---HhcCCEEEECCChhhhcC--
Confidence 4678999999887 55322 134789999999998654454445533 233221 234699988743333333
Q ss_pred HHHHHHHHHHHccccCcEEEE
Q 017080 197 RRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG~l~i 217 (377)
++....+|||.+++-
T Consensus 328 ------~~~l~~MK~gailiN 342 (479)
T 1v8b_A 328 ------LEHLLKMKNNAVVGN 342 (479)
T ss_dssp ------HHHHTTCCTTCEEEE
T ss_pred ------HHHHhhcCCCcEEEE
Confidence 245567899876543
No 463
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=42.35 E-value=17 Score=34.45 Aligned_cols=89 Identities=19% Similarity=0.183 Sum_probs=51.7
Q ss_pred EEEEECCcc-Ccccc--cCCCceEEEEeCCHHHHHHHHHcCCeE----------------E-EeeCCCCCCCCCceeEEE
Q 017080 125 LVLDAGCGN-GKYLG--LNPDCFFVGCDISPSLIKICVDRGHEV----------------L-VADAVNLPYRSDFGDAAI 184 (377)
Q Consensus 125 ~vLDiGcG~-G~~~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------~-~~d~~~~~~~~~~fD~V~ 184 (377)
+|.=||+|. |.... ...+.+|+++|.++..++..++.+..+ . ..|..+ .-...|+|+
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~---~~~~aDvvi 78 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKA---AYKEAELVI 78 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHH---HHHHCSEEE
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHH---HhcCCCEEE
Confidence 577789887 55321 122789999999999888776654321 1 111100 012468877
Q ss_pred eccchh-----hcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 185 SIAVLH-----HLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 185 ~~~~l~-----h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
..---. ..+|-.....+++.+.. ++||..++.
T Consensus 79 iavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 79 IATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp ECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred EecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 753221 01111126788888988 888876665
No 464
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=41.70 E-value=19 Score=32.63 Aligned_cols=86 Identities=17% Similarity=0.131 Sum_probs=51.1
Q ss_pred CEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHcCCeEEEe--eCC--CC-----CCCCCceeEEEeccchh
Q 017080 124 SLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDRGHEVLVA--DAV--NL-----PYRSDFGDAAISIAVLH 190 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--d~~--~~-----~~~~~~fD~V~~~~~l~ 190 (377)
++|+=||+|. |.... . ..+.+|+.++.++ .+..++.++.+... +.. .. +.....+|+|+..---.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecCCC
Confidence 4688899997 55332 1 3457899999987 36666665443221 110 00 00124689988864333
Q ss_pred hcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 191 HLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 191 h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
. ...+++++...++|+..++.
T Consensus 81 ~------~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 81 A------NSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp G------GGGHHHHHGGGCCTTCEEEE
T ss_pred C------cHHHHHHHHhhcCCCCEEEE
Confidence 3 34678889999998875544
No 465
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=41.53 E-value=23 Score=34.58 Aligned_cols=69 Identities=7% Similarity=-0.027 Sum_probs=48.0
Q ss_pred CEEEEECCccCcccc--cCCCc-eEEEEeCCHHHHHHHHHc-----CCeEEEeeCCCCCCC-----------------CC
Q 017080 124 SLVLDAGCGNGKYLG--LNPDC-FFVGCDISPSLIKICVDR-----GHEVLVADAVNLPYR-----------------SD 178 (377)
Q Consensus 124 ~~vLDiGcG~G~~~~--~~~~~-~v~gvD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~-----------------~~ 178 (377)
.+++|+-||.|.+.. ...|. .|.++|+++...+.-+.+ +..++.+|+.++... -.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~~ 168 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIP 168 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHSC
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcCC
Confidence 589999999998753 23455 478999999998887766 245777888664311 13
Q ss_pred ceeEEEeccchhhc
Q 017080 179 FGDAAISIAVLHHL 192 (377)
Q Consensus 179 ~fD~V~~~~~l~h~ 192 (377)
.+|+++...-...+
T Consensus 169 ~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 169 EHDVLLAGFPCQPF 182 (482)
T ss_dssp CCSEEEEECCCCCC
T ss_pred CCCEEEecCCCcch
Confidence 58998875544433
No 466
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=41.09 E-value=17 Score=32.56 Aligned_cols=87 Identities=14% Similarity=0.130 Sum_probs=52.2
Q ss_pred CEEEEECCcc-Cccccc---CC-----C-ceEEEEeCCHHHHHHHHH-cCCeEEE--ee-----C--CCCCCCCCceeEE
Q 017080 124 SLVLDAGCGN-GKYLGL---NP-----D-CFFVGCDISPSLIKICVD-RGHEVLV--AD-----A--VNLPYRSDFGDAA 183 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~~---~~-----~-~~v~gvD~s~~~~~~a~~-~~~~~~~--~d-----~--~~~~~~~~~fD~V 183 (377)
++|.=||+|. |..... .. + .+|+.+|. +..++..++ .++.+.. ++ . ...+.....+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999997 654321 23 6 79999998 776776666 5544321 00 0 0000012468988
Q ss_pred EeccchhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 184 ISIAVLHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 184 ~~~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
+..- +... ...+++++...++|+..++.
T Consensus 88 il~v-----k~~~-~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 88 LFCT-----KDYD-MERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp EECC-----SSSC-HHHHHHHHGGGEEEEEEEEE
T ss_pred EEec-----Cccc-HHHHHHHHHhhcCCCCEEEE
Confidence 8853 2222 46788888888887654443
No 467
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=41.04 E-value=23 Score=32.09 Aligned_cols=85 Identities=11% Similarity=0.037 Sum_probs=51.0
Q ss_pred EEEEECCcc-Ccccc-c--CCCceEEEEeC--CHHHHHHHHHcCCe---------EEEeeCCCCCCCCCceeEEEeccch
Q 017080 125 LVLDAGCGN-GKYLG-L--NPDCFFVGCDI--SPSLIKICVDRGHE---------VLVADAVNLPYRSDFGDAAISIAVL 189 (377)
Q Consensus 125 ~vLDiGcG~-G~~~~-~--~~~~~v~gvD~--s~~~~~~a~~~~~~---------~~~~d~~~~~~~~~~fD~V~~~~~l 189 (377)
+|.=||+|. |.... . ..+.+|+.+|. ++..++...+.+.. +...+.+++...-...|+|+..---
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCCh
Confidence 678899987 55332 1 34579999999 98888777665421 1111100110001357988876432
Q ss_pred hhcCChHHHHHHHHHHHHccccCcEEE
Q 017080 190 HHLSTESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 190 ~h~~~~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
. . ...+++++.. ++||..++
T Consensus 82 ~-----~-~~~v~~~i~~-l~~~~~vv 101 (335)
T 1txg_A 82 D-----G-VLPVMSRILP-YLKDQYIV 101 (335)
T ss_dssp G-----G-HHHHHHHHTT-TCCSCEEE
T ss_pred H-----H-HHHHHHHHhc-CCCCCEEE
Confidence 2 2 5678888888 88876544
No 468
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=40.56 E-value=25 Score=31.34 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=50.7
Q ss_pred CEEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHH
Q 017080 124 SLVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRK 199 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~ 199 (377)
.+|.=||+|. |... .. ..+.+|+++|.++...+...+.++... .+..+. -...|+|+.. ++......
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~---~~~~D~vi~~-----vp~~~~~~ 75 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQAC-ENNQKV---AAASDIIFTS-----LPNAGIVE 75 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEEC-SSHHHH---HHHCSEEEEC-----CSSHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeec-CCHHHH---HhCCCEEEEE-----CCCHHHHH
Confidence 5899999987 5532 11 346789999999988877766555421 111110 1246888875 33322234
Q ss_pred HHHH---HHHHccccCcEEEEE
Q 017080 200 KAIE---ELVRVVKKGSLVLIT 218 (377)
Q Consensus 200 ~~l~---~~~r~LkpgG~l~i~ 218 (377)
.++. ++...++||.. ++.
T Consensus 76 ~v~~~~~~l~~~l~~~~~-vv~ 96 (301)
T 3cky_A 76 TVMNGPGGVLSACKAGTV-IVD 96 (301)
T ss_dssp HHHHSTTCHHHHSCTTCE-EEE
T ss_pred HHHcCcchHhhcCCCCCE-EEE
Confidence 5554 67777888764 444
No 469
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=40.54 E-value=74 Score=27.45 Aligned_cols=98 Identities=8% Similarity=0.054 Sum_probs=60.2
Q ss_pred CCCEEEEECCc--cCcc---ccc--CCCceEEEEeCCHHHHHHHHHc-------CCeEEEeeCCCCC-----CC-----C
Q 017080 122 SGSLVLDAGCG--NGKY---LGL--NPDCFFVGCDISPSLIKICVDR-------GHEVLVADAVNLP-----YR-----S 177 (377)
Q Consensus 122 ~~~~vLDiGcG--~G~~---~~~--~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~d~~~~~-----~~-----~ 177 (377)
.++++|=.|++ .|.- +.. ..+++|+.++.++...+...+. ++.++.+|+.+.. +. .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 46789999976 4452 221 4688999999887544333321 4788999998742 00 1
Q ss_pred CceeEEEeccchhh-------c--CChHHHH-----------HHHHHHHHccccCcEEEEEE
Q 017080 178 DFGDAAISIAVLHH-------L--STESRRK-----------KAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 178 ~~fD~V~~~~~l~h-------~--~~~~~~~-----------~~l~~~~r~LkpgG~l~i~~ 219 (377)
+..|+++.+..+.+ + .+.+.+. .+++.+...++++|.++...
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 46898887765432 0 1212222 25566777778888877764
No 470
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=39.27 E-value=5.7 Score=37.15 Aligned_cols=84 Identities=21% Similarity=0.266 Sum_probs=50.5
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccch----hhcC
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVL----HHLS 193 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l----~h~~ 193 (377)
.|++|.=||.|. |.-. . ...+.+|++.|.++...+.+...++... .+++++ -...|+|+..-.+ .|+-
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~el---l~~aDvV~l~~Plt~~t~~li 238 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-EDLNEM---LPKCDVIVINMPLTEKTRGMF 238 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-SCHHHH---GGGCSEEEECSCCCTTTTTCB
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-CCHHHH---HhcCCEEEECCCCCHHHHHhh
Confidence 578999999997 6532 2 2457899999998755555555555332 122221 2346998885443 2222
Q ss_pred ChHHHHHHHHHHHHccccCcEEEE
Q 017080 194 TESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 194 ~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
+ ++....+|||.+|+-
T Consensus 239 ~--------~~~l~~mk~gailIN 254 (351)
T 3jtm_A 239 N--------KELIGKLKKGVLIVN 254 (351)
T ss_dssp S--------HHHHHHSCTTEEEEE
T ss_pred c--------HHHHhcCCCCCEEEE
Confidence 2 445677888865443
No 471
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=38.63 E-value=15 Score=30.05 Aligned_cols=27 Identities=22% Similarity=0.183 Sum_probs=22.2
Q ss_pred CEEEEECCccCcc---cc-cCCCceEEEEeC
Q 017080 124 SLVLDAGCGNGKY---LG-LNPDCFFVGCDI 150 (377)
Q Consensus 124 ~~vLDiGcG~G~~---~~-~~~~~~v~gvD~ 150 (377)
.-|||+|-|+|+. ++ ..|+.+|+.+|-
T Consensus 42 GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 4699999999994 33 489999999995
No 472
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=38.22 E-value=26 Score=33.40 Aligned_cols=89 Identities=12% Similarity=0.029 Sum_probs=50.0
Q ss_pred EEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCe------------------EE-EeeCCCCCCCCCcee
Q 017080 125 LVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHE------------------VL-VADAVNLPYRSDFGD 181 (377)
Q Consensus 125 ~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~------------------~~-~~d~~~~~~~~~~fD 181 (377)
+|.=||+|. |..+. ...+.+|+++|.++..++...+.... +. ..|..+ .-...|
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~---~~~~aD 78 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKK---AVLDSD 78 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHH---HHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHH---HhccCC
Confidence 577788887 55322 13467999999999988777653211 11 111110 012358
Q ss_pred EEEeccchh----hcCChHHHHHHHHHHHHcccc---CcEEE
Q 017080 182 AAISIAVLH----HLSTESRRKKAIEELVRVVKK---GSLVL 216 (377)
Q Consensus 182 ~V~~~~~l~----h~~~~~~~~~~l~~~~r~Lkp---gG~l~ 216 (377)
+|+..-.-. ..+|-.....+++++...|++ |..++
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV 120 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVV 120 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEE
T ss_pred EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEE
Confidence 777653211 112211146778888888988 54443
No 473
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=37.83 E-value=33 Score=33.33 Aligned_cols=95 Identities=14% Similarity=0.095 Sum_probs=55.4
Q ss_pred CCCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeC----------CCCCCC------CCcee
Q 017080 122 SGSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHEVLVADA----------VNLPYR------SDFGD 181 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~----------~~~~~~------~~~fD 181 (377)
..++|.=||+|. |..+. ...+.+|+++|+++..++..++....+..-+. ..+.+. -...|
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 347899999997 65332 14567999999999988887765321111000 000000 12357
Q ss_pred EEEeccch----hhcCChHHHHHHHHHHHHccccCcEEE
Q 017080 182 AAISIAVL----HHLSTESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 182 ~V~~~~~l----~h~~~~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
+|+..-.- ..-+|-.....+++.+...|+||..++
T Consensus 87 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV 125 (478)
T 2y0c_A 87 VQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIV 125 (478)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEE
T ss_pred EEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEE
Confidence 77765321 111122336788889999999876553
No 474
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=37.32 E-value=15 Score=33.62 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=50.7
Q ss_pred CEEEEECCcc-Ccccc-c--CCCceEEEEeCCHHHHHHHHHcCCeEEEe------e--CCCCCCCCCceeEEEeccchhh
Q 017080 124 SLVLDAGCGN-GKYLG-L--NPDCFFVGCDISPSLIKICVDRGHEVLVA------D--AVNLPYRSDFGDAAISIAVLHH 191 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~-~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~------d--~~~~~~~~~~fD~V~~~~~l~h 191 (377)
++|.=||+|. |.... . ..+.+|+.+|.+ ..++..++.++..... . +...+-.-..+|+|+..-
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilav---- 78 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAV---- 78 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEEEECC----
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeC----
Confidence 5799999997 55432 1 346789999985 4566666665543210 0 000000114579888753
Q ss_pred cCChHHHHHHHHHHHHccccCcEEEE
Q 017080 192 LSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 192 ~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
+.. ....+++++...++|+..++.
T Consensus 79 -k~~-~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 79 -KAP-ALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp -CHH-HHHHHHGGGSSSCCTTCEEEE
T ss_pred -Cch-hHHHHHHHHHhhCCCCCEEEE
Confidence 221 155777777777878765544
No 475
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=37.00 E-value=4.7 Score=37.00 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=49.0
Q ss_pred CCCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 121 PSGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
-.|++|.=||+|. |.-. . ...+.+|+++|.++... .+.+.++.. .+..++ -...|+|+..-.+..-
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~--~~l~el---l~~aDvVvl~~P~~~~---- 209 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA--VSLEEL---LKNSDVISLHVTVSKD---- 209 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE--CCHHHH---HHHCSEEEECCCCCTT----
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee--cCHHHH---HhhCCEEEEeccCChH----
Confidence 3578999999987 6532 2 14578999999988654 344445543 232221 1245888875432110
Q ss_pred HHHHHH-HHHHHccccCcEEE
Q 017080 197 RRKKAI-EELVRVVKKGSLVL 216 (377)
Q Consensus 197 ~~~~~l-~~~~r~LkpgG~l~ 216 (377)
...++ ++....+|||+.++
T Consensus 210 -t~~li~~~~l~~mk~ga~lI 229 (313)
T 2ekl_A 210 -AKPIIDYPQFELMKDNVIIV 229 (313)
T ss_dssp -SCCSBCHHHHHHSCTTEEEE
T ss_pred -HHHhhCHHHHhcCCCCCEEE
Confidence 11122 34556788876543
No 476
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=36.82 E-value=9.8 Score=33.99 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=49.9
Q ss_pred EEEEECCcc-Cccc-cc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHHHHH
Q 017080 125 LVLDAGCGN-GKYL-GL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESRRKK 200 (377)
Q Consensus 125 ~vLDiGcG~-G~~~-~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~~~~ 200 (377)
+|.=||+|. |... .. ..+.+|++.|.++...+...+.++.+. .+..+. -...|+|+.. +++......
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~---~~~advvi~~-----v~~~~~~~~ 73 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQA-SSPAEV---CAACDITIAM-----LADPAAARE 73 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEEC-SCHHHH---HHHCSEEEEC-----CSSHHHHHH
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-CCHHHH---HHcCCEEEEE-----cCCHHHHHH
Confidence 577789887 5532 21 346789999999988877776655431 111111 1235887774 455322455
Q ss_pred HH---HHHHHccccCcEEE
Q 017080 201 AI---EELVRVVKKGSLVL 216 (377)
Q Consensus 201 ~l---~~~~r~LkpgG~l~ 216 (377)
++ +++...++||..++
T Consensus 74 v~~~~~~l~~~l~~g~~vv 92 (287)
T 3pdu_A 74 VCFGANGVLEGIGGGRGYI 92 (287)
T ss_dssp HHHSTTCGGGTCCTTCEEE
T ss_pred HHcCchhhhhcccCCCEEE
Confidence 56 66677788776543
No 477
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=36.44 E-value=6.4 Score=36.68 Aligned_cols=86 Identities=20% Similarity=0.221 Sum_probs=49.2
Q ss_pred CCCCEEEEECCcc-Cccc-c--c-CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 121 PSGSLVLDAGCGN-GKYL-G--L-NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~-~--~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
-.|++|.=||+|. |.-. . . ..+.+|+++|.++...+.+.+.++.+. .+..++ -...|+|+..-....
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~el---l~~aDvVil~vp~~~---- 232 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-DSLEEL---ARRSDCVSVSVPYMK---- 232 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-SSHHHH---HHHCSEEEECCCCSG----
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-CCHHHH---hccCCEEEEeCCCCh----
Confidence 3578999999987 6532 2 2 456799999998765555554455432 122111 124588887543321
Q ss_pred HHHHHHH-HHHHHccccCcEE
Q 017080 196 SRRKKAI-EELVRVVKKGSLV 215 (377)
Q Consensus 196 ~~~~~~l-~~~~r~LkpgG~l 215 (377)
....++ +++...+|||..|
T Consensus 233 -~t~~li~~~~l~~mk~gail 252 (348)
T 2w2k_A 233 -LTHHLIDEAFFAAMKPGSRI 252 (348)
T ss_dssp -GGTTCBCHHHHHHSCTTEEE
T ss_pred -HHHHHhhHHHHhcCCCCCEE
Confidence 011122 2455678887655
No 478
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=36.28 E-value=20 Score=32.37 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=21.8
Q ss_pred HHHHHHHHHHccccCcEEEEEEcC
Q 017080 198 RKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 198 ~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+..+|..+.++|+|||++.+..+.
T Consensus 212 L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCEEEEEecC
Confidence 788999999999999999998765
No 479
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=35.94 E-value=7.5 Score=35.87 Aligned_cols=85 Identities=12% Similarity=0.049 Sum_probs=48.5
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
.+++|.=||+|. |.-. . ...+.+|+++|.++...+.+.+.++.+. +..++ -...|+|+..-...--
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--~l~e~---l~~aDvVi~~vp~~~~----- 223 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV--STPEL---AAQSDFIVVACSLTPA----- 223 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC--CHHHH---HHHCSEEEECCCCCTT-----
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC--CHHHH---HhhCCEEEEeCCCChH-----
Confidence 467999999987 6532 2 1456799999987754444444444432 32221 1245888875433210
Q ss_pred HHHHH-HHHHHccccCcEEE
Q 017080 198 RKKAI-EELVRVVKKGSLVL 216 (377)
Q Consensus 198 ~~~~l-~~~~r~LkpgG~l~ 216 (377)
...++ +++...+|||..++
T Consensus 224 t~~~i~~~~~~~mk~gailI 243 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFI 243 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEE
T ss_pred HHHhhCHHHHhcCCCCcEEE
Confidence 11222 34566788887653
No 480
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=35.94 E-value=11 Score=34.87 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=49.7
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
.+++|.=||+|. |... . ...+.+|+++|.++.. +.+...++.+ .+..++ -...|+|+..-....-
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~--~~l~~~---l~~aDvVil~vp~~~~----- 217 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF--KPLEDL---LRESDFVVLAVPLTRE----- 217 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE--CCHHHH---HHHCSEEEECCCCCTT-----
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc--CCHHHH---HhhCCEEEECCCCChH-----
Confidence 567999999987 6532 2 1456799999998876 5554445533 222221 1245888875433220
Q ss_pred HHHHH-HHHHHccccCcEEE
Q 017080 198 RKKAI-EELVRVVKKGSLVL 216 (377)
Q Consensus 198 ~~~~l-~~~~r~LkpgG~l~ 216 (377)
...++ +++...+|||..++
T Consensus 218 t~~~i~~~~~~~mk~~ailI 237 (334)
T 2dbq_A 218 TYHLINEERLKLMKKTAILI 237 (334)
T ss_dssp TTTCBCHHHHHHSCTTCEEE
T ss_pred HHHhhCHHHHhcCCCCcEEE
Confidence 11223 35667789987653
No 481
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=35.66 E-value=20 Score=33.24 Aligned_cols=24 Identities=17% Similarity=0.290 Sum_probs=21.9
Q ss_pred HHHHHHHHHHccccCcEEEEEEcC
Q 017080 198 RKKAIEELVRVVKKGSLVLITVWA 221 (377)
Q Consensus 198 ~~~~l~~~~r~LkpgG~l~i~~~~ 221 (377)
+..+|..+.++|+|||++++..+.
T Consensus 253 L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 253 IEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHhCCCCEEEEEecC
Confidence 788999999999999999999875
No 482
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=35.17 E-value=23 Score=38.06 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=61.9
Q ss_pred CCEEEEECCcc-Cccccc-CCCceEEEEeCCHHHHHHHHHc-C-CeEEEeeCCCCC-CCCCceeEEEeccchhhcC--Ch
Q 017080 123 GSLVLDAGCGN-GKYLGL-NPDCFFVGCDISPSLIKICVDR-G-HEVLVADAVNLP-YRSDFGDAAISIAVLHHLS--TE 195 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~~-~~~~~v~gvD~s~~~~~~a~~~-~-~~~~~~d~~~~~-~~~~~fD~V~~~~~l~h~~--~~ 195 (377)
+..+||+|+|. -+.+.. -+...|+.+|.=|..-..+.=+ . -.|++.|..... .-...+|.+.|...|..-- ..
T Consensus 828 ~~~~lDLGTGPEcRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~vtailSLGAA~a~a~ 907 (1299)
T 3iyl_W 828 LAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAAAG 907 (1299)
T ss_dssp GCSEEEETCCSSCSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEEEETTTHHHHHHHTT
T ss_pred CCEEEEcCCCccceeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEEEEeeechhhhhhCC
Confidence 47899999998 445554 5667999999744321111101 2 468999987743 3356799999998886521 00
Q ss_pred HHHHHHHHHHHHccccCcE
Q 017080 196 SRRKKAIEELVRVVKKGSL 214 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~ 214 (377)
-...+.++++.+.+++.|.
T Consensus 908 ~tl~~~l~~~l~~~~~~~v 926 (1299)
T 3iyl_W 908 TDLIAFVQQLIPRIVAAGG 926 (1299)
T ss_dssp CCHHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHhcCc
Confidence 1178899999999888775
No 483
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=34.58 E-value=85 Score=30.43 Aligned_cols=93 Identities=16% Similarity=0.050 Sum_probs=54.9
Q ss_pred CCCCEEEEECCcc-Ccccc----cCCCc-eEEEEeCCHH----HHHHHHHcCC--------------------eE-EEee
Q 017080 121 PSGSLVLDAGCGN-GKYLG----LNPDC-FFVGCDISPS----LIKICVDRGH--------------------EV-LVAD 169 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~~----~~~~~-~v~gvD~s~~----~~~~a~~~~~--------------------~~-~~~d 169 (377)
.+-++|-=||+|. |.-+. ..+|. +|+++|+++. .++...+... .+ ...|
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd 95 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD 95 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence 4557899999998 54221 23478 9999999998 7665543211 11 1122
Q ss_pred CCCCCCCCCceeEEEeccchhhc------CChHHHHHHHHHHHHccccCcEEEE
Q 017080 170 AVNLPYRSDFGDAAISIAVLHHL------STESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 170 ~~~~~~~~~~fD~V~~~~~l~h~------~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
.+. -...|+|+..-.-..- +|-.......+.+...|+||-.++.
T Consensus 96 ~ea----~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~ 145 (478)
T 3g79_A 96 FSR----ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVL 145 (478)
T ss_dssp GGG----GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEE
T ss_pred HHH----HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEE
Confidence 111 1345888775332211 3323356778889999999875544
No 484
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=34.53 E-value=23 Score=32.79 Aligned_cols=65 Identities=20% Similarity=0.140 Sum_probs=44.1
Q ss_pred CCCEEEEECCcc-Ccccc--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCC-CC--CCceeEEEecc
Q 017080 122 SGSLVLDAGCGN-GKYLG--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLP-YR--SDFGDAAISIA 187 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~-~~--~~~fD~V~~~~ 187 (377)
..++||=+|||. |.... .....+|+..|.+...++.+++. +..+..|+.+.. +. -...|+|++..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~-~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF-ATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT-SEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc-CCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 346899999974 65432 24456899999999988887655 666777776532 11 14579988754
No 485
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=34.31 E-value=7.1 Score=37.10 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=50.1
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
.|++|.=||+|. |.-. + ...+.+|++.|.++...+.+...++... .++.++ -...|+|+..-.+.- .
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-~~l~el---l~~aDvV~l~~Plt~--~--- 260 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-ATREDM---YPVCDVVTLNCPLHP--E--- 260 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-SSHHHH---GGGCSEEEECSCCCT--T---
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-CCHHHH---HhcCCEEEEecCCch--H---
Confidence 578999999997 6532 2 2456899999998654455555455431 122221 234698888643321 0
Q ss_pred HHHHH-HHHHHccccCcEEE
Q 017080 198 RKKAI-EELVRVVKKGSLVL 216 (377)
Q Consensus 198 ~~~~l-~~~~r~LkpgG~l~ 216 (377)
-..++ ++....+|||..|+
T Consensus 261 t~~li~~~~l~~mk~gailI 280 (393)
T 2nac_A 261 TEHMINDETLKLFKRGAYIV 280 (393)
T ss_dssp TTTCBSHHHHTTSCTTEEEE
T ss_pred HHHHhhHHHHhhCCCCCEEE
Confidence 11233 35667788876543
No 486
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=34.18 E-value=32 Score=31.06 Aligned_cols=84 Identities=12% Similarity=0.090 Sum_probs=51.9
Q ss_pred CCEEEEECCcc-Cccc-cc--CCCc-eEEEEeCC--HHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 123 GSLVLDAGCGN-GKYL-GL--NPDC-FFVGCDIS--PSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~-~~--~~~~-~v~gvD~s--~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
..+|.=||+|. |... .. ..+. +|+++|.+ +...+.+.+.++... .+..+. -...|+|+.. +++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~-~~~~e~---~~~aDvVi~~-----vp~~ 94 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCK-ASVAEV---AGECDVIFSL-----VTAQ 94 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEEC-SCHHHH---HHHCSEEEEC-----SCTT
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEe-CCHHHH---HhcCCEEEEe-----cCch
Confidence 46899999987 5532 21 3456 89999996 577777776665432 111110 1245888875 3433
Q ss_pred HHHHHHHHHHHHccccCcEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~ 216 (377)
. ...+++++...+++|..++
T Consensus 95 ~-~~~~~~~l~~~l~~~~ivv 114 (312)
T 3qsg_A 95 A-ALEVAQQAGPHLCEGALYA 114 (312)
T ss_dssp T-HHHHHHHHGGGCCTTCEEE
T ss_pred h-HHHHHHhhHhhcCCCCEEE
Confidence 3 3467788889998876544
No 487
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=34.10 E-value=16 Score=31.79 Aligned_cols=85 Identities=20% Similarity=0.356 Sum_probs=49.2
Q ss_pred CEEEEECCcc-Cccc-cc--CCCc----eEEEEeCCHHHHHHHHHc-CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 124 SLVLDAGCGN-GKYL-GL--NPDC----FFVGCDISPSLIKICVDR-GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~-~~--~~~~----~v~gvD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
.+|.=||+|. |... .. ..+. +|+++|.++..++...+. ++... .|..+. -...|+|+..- +.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~-~~~~e~---~~~aDvVilav-----~~ 73 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTT-TDNNEV---AKNADILILSI-----KP 73 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEEC-SCHHHH---HHHCSEEEECS-----CT
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEe-CChHHH---HHhCCEEEEEe-----CH
Confidence 4688899997 5432 11 2333 899999999988777543 55431 111110 12468888754 22
Q ss_pred hHHHHHHHHHHHHccccCcEEEEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~i~~ 219 (377)
.. ...+++++...++||.. +++.
T Consensus 74 ~~-~~~v~~~l~~~l~~~~~-vvs~ 96 (247)
T 3gt0_A 74 DL-YASIINEIKEIIKNDAI-IVTI 96 (247)
T ss_dssp TT-HHHHC---CCSSCTTCE-EEEC
T ss_pred HH-HHHHHHHHHhhcCCCCE-EEEe
Confidence 22 66788888888888764 4443
No 488
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=34.08 E-value=12 Score=34.70 Aligned_cols=82 Identities=18% Similarity=0.114 Sum_probs=51.1
Q ss_pred CCEEEEECCcc-Ccc-ccc--CCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCC--CceeEEEeccchhhcCChH
Q 017080 123 GSLVLDAGCGN-GKY-LGL--NPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRS--DFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~-~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~--~~fD~V~~~~~l~h~~~~~ 196 (377)
..+|.=||+|. |.. +.. ..+.+|++.|.++..++.+.+.++... .|..+. ... ...|+|+..--...
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~-~~~~e~-~~~a~~~aDlVilavP~~~----- 80 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVS-ADLEAT-LQRAAAEDALIVLAVPMTA----- 80 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE-SCHHHH-HHHHHHTTCEEEECSCHHH-----
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeee-CCHHHH-HHhcccCCCEEEEeCCHHH-----
Confidence 35788999987 553 221 346799999999999988888776431 221111 000 12488888654322
Q ss_pred HHHHHHHHHHHccccCc
Q 017080 197 RRKKAIEELVRVVKKGS 213 (377)
Q Consensus 197 ~~~~~l~~~~r~LkpgG 213 (377)
...+++++... +||.
T Consensus 81 -~~~vl~~l~~~-~~~~ 95 (341)
T 3ktd_A 81 -IDSLLDAVHTH-APNN 95 (341)
T ss_dssp -HHHHHHHHHHH-CTTC
T ss_pred -HHHHHHHHHcc-CCCC
Confidence 45677777775 7764
No 489
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=33.45 E-value=64 Score=27.68 Aligned_cols=97 Identities=13% Similarity=-0.004 Sum_probs=56.6
Q ss_pred CCCEEEEECCccCcc---ccc--C-CCceEEEEeCCHHHHHHHHHc------CCeEEEeeCCCCC-----CC-----CCc
Q 017080 122 SGSLVLDAGCGNGKY---LGL--N-PDCFFVGCDISPSLIKICVDR------GHEVLVADAVNLP-----YR-----SDF 179 (377)
Q Consensus 122 ~~~~vLDiGcG~G~~---~~~--~-~~~~v~gvD~s~~~~~~a~~~------~~~~~~~d~~~~~-----~~-----~~~ 179 (377)
.+++||=.|++.|.- +.. . .+++|+.++.++...+...+. ++.++.+|+.+.. +. -+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456888777665541 121 4 678999999987655443221 4788899987632 00 137
Q ss_pred eeEEEeccchhhcC----C-hHHH-----------HHHHHHHHHccccCcEEEEE
Q 017080 180 GDAAISIAVLHHLS----T-ESRR-----------KKAIEELVRVVKKGSLVLIT 218 (377)
Q Consensus 180 fD~V~~~~~l~h~~----~-~~~~-----------~~~l~~~~r~LkpgG~l~i~ 218 (377)
+|+|+.+....... . .+++ ..+++.+.+.++++|.+++.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 89888765433211 1 1212 23445566666667776665
No 490
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=33.23 E-value=1.4e+02 Score=24.59 Aligned_cols=94 Identities=14% Similarity=0.078 Sum_probs=56.3
Q ss_pred EEEEECCcc--Cccc-c--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCC-CCCceeEEEeccchhhcCC-hHH
Q 017080 125 LVLDAGCGN--GKYL-G--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPY-RSDFGDAAISIAVLHHLST-ESR 197 (377)
Q Consensus 125 ~vLDiGcG~--G~~~-~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~-~~~~fD~V~~~~~l~h~~~-~~~ 197 (377)
+||=.|+.. |..+ . ...+.+|++++.++.........++.++.+|+.+... .-+.+|+|+......+-+. ...
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 81 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYL 81 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhhH
Confidence 577777633 3322 1 1457899999999887765544579999999987532 1145798888765532211 111
Q ss_pred HHHHHHHHHHcccc-CcEEEEE
Q 017080 198 RKKAIEELVRVVKK-GSLVLIT 218 (377)
Q Consensus 198 ~~~~l~~~~r~Lkp-gG~l~i~ 218 (377)
-......+.+.++. |+.+++.
T Consensus 82 n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 82 HLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp HHHHHHHHHHTCTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEE
Confidence 23445666666654 3454444
No 491
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=33.13 E-value=10 Score=34.73 Aligned_cols=86 Identities=13% Similarity=0.002 Sum_probs=49.0
Q ss_pred CCCCEEEEECCcc-Cccc-c--cCCCceEEEEeC-CHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 121 PSGSLVLDAGCGN-GKYL-G--LNPDCFFVGCDI-SPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 121 ~~~~~vLDiGcG~-G~~~-~--~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
-.|++|.=||+|. |.-. . ...+.+|+++|. ++.. ..+.+.++.+. .+..++ -...|+|+..-.+.. .
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~-~~l~el---l~~aDvVil~~p~~~--~- 215 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFH-DSLDSL---LSVSQFFSLNAPSTP--E- 215 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEEC-SSHHHH---HHHCSEEEECCCCCT--T-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEc-CCHHHH---HhhCCEEEEeccCch--H-
Confidence 3578999999987 6532 2 256789999999 7765 34444455421 122111 134688887543211 0
Q ss_pred HHHHHHH-HHHHHccccCcEEE
Q 017080 196 SRRKKAI-EELVRVVKKGSLVL 216 (377)
Q Consensus 196 ~~~~~~l-~~~~r~LkpgG~l~ 216 (377)
...++ ++....+|||+.++
T Consensus 216 --t~~~i~~~~l~~mk~gailI 235 (320)
T 1gdh_A 216 --TRYFFNKATIKSLPQGAIVV 235 (320)
T ss_dssp --TTTCBSHHHHTTSCTTEEEE
T ss_pred --HHhhcCHHHHhhCCCCcEEE
Confidence 11223 34567789976543
No 492
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=32.85 E-value=26 Score=34.17 Aligned_cols=88 Identities=13% Similarity=0.141 Sum_probs=53.0
Q ss_pred CEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcC---CeEE-EeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 124 SLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRG---HEVL-VADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~---~~~~-~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
++|-=||+|. |..+. ...+.+|++.|.++..++...+.+ ..+. ..+..++--.-...|+|+.. ++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~-----Vp~~ 79 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILL-----VKAG 79 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEEC-----SCSS
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEe-----cCCh
Confidence 4688899887 55322 145679999999999888776642 2221 11221110000135877774 4543
Q ss_pred HHHHHHHHHHHHccccCcEEE
Q 017080 196 SRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l~ 216 (377)
+....++.++...|+||..++
T Consensus 80 ~~v~~vl~~l~~~L~~g~iII 100 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIII 100 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEE
Confidence 335678889999998876543
No 493
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=32.82 E-value=45 Score=29.67 Aligned_cols=98 Identities=9% Similarity=-0.017 Sum_probs=58.9
Q ss_pred CCCEEEEECCcc--Cc--c-ccc--CCCceEEEEeCCHHHHHHHHH----c-CCeEEEeeCCCCC-----CC-----CCc
Q 017080 122 SGSLVLDAGCGN--GK--Y-LGL--NPDCFFVGCDISPSLIKICVD----R-GHEVLVADAVNLP-----YR-----SDF 179 (377)
Q Consensus 122 ~~~~vLDiGcG~--G~--~-~~~--~~~~~v~gvD~s~~~~~~a~~----~-~~~~~~~d~~~~~-----~~-----~~~ 179 (377)
.++++|=.|++. |. - +.. ..+++|+.+|.++...+...+ . .+.++.+|+.+.. +. -+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999853 43 2 221 568899999998754333222 1 4678889987732 00 147
Q ss_pred eeEEEeccchhhc---------CChHHHH-----------HHHHHHHHccccCcEEEEEE
Q 017080 180 GDAAISIAVLHHL---------STESRRK-----------KAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 180 fD~V~~~~~l~h~---------~~~~~~~-----------~~l~~~~r~LkpgG~l~i~~ 219 (377)
.|+++.+..+... .+.+++. .+++.+...++.+|.++...
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 8998887654321 1212222 34455666777788877764
No 494
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=32.15 E-value=53 Score=30.42 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=53.7
Q ss_pred CCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHcCCe--E----------E-EeeCCCCCCCCCceeEEEe
Q 017080 123 GSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDRGHE--V----------L-VADAVNLPYRSDFGDAAIS 185 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~~~~--~----------~-~~d~~~~~~~~~~fD~V~~ 185 (377)
.++|.=||+|. |..+. ...+.+|+.+|.++..++..++.+.. + . ..|..+ .-...|+|+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~e---a~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKA---SLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHH---HHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHH---HHhcCCEEEE
Confidence 35899999987 55332 14567999999999988777664211 1 0 111111 0134688887
Q ss_pred ccchhhcCChHHHHHHHHHHHHccccCcEEEE
Q 017080 186 IAVLHHLSTESRRKKAIEELVRVVKKGSLVLI 217 (377)
Q Consensus 186 ~~~l~h~~~~~~~~~~l~~~~r~LkpgG~l~i 217 (377)
.- +.. ....+++++...++|+-.++.
T Consensus 106 aV-----p~~-~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 106 VV-----PSF-AFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp CC-----CHH-HHHHHHHHHGGGCCTTCEEEE
T ss_pred CC-----CHH-HHHHHHHHHHHhcCCCCEEEE
Confidence 53 322 267888999999988765443
No 495
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=31.78 E-value=32 Score=33.37 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=52.9
Q ss_pred CCEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHc----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCC
Q 017080 123 GSLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDR----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLST 194 (377)
Q Consensus 123 ~~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~ 194 (377)
.++|.=||+|. |..+. ...+.+|++.|.++..++...+. ++.. ..|..+.--.-+..|+|+.. +++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~-~~s~~e~v~~l~~aDvVil~-----Vp~ 88 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVP-YYTVKEFVESLETPRRILLM-----VKA 88 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEE-CSSHHHHHHTBCSSCEEEEC-----SCS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEE-eCCHHHHHhCCCCCCEEEEE-----CCC
Confidence 35788999997 65332 14567999999999888776654 3221 11211110000136888875 444
Q ss_pred hHHHHHHHHHHHHccccCcEEE
Q 017080 195 ESRRKKAIEELVRVVKKGSLVL 216 (377)
Q Consensus 195 ~~~~~~~l~~~~r~LkpgG~l~ 216 (377)
......+++++...|+||..++
T Consensus 89 ~~~v~~vl~~l~~~l~~g~iII 110 (480)
T 2zyd_A 89 GAGTDAAIDSLKPYLDKGDIII 110 (480)
T ss_dssp SSHHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHHHHhhcCCCCEEE
Confidence 2225678888988898875433
No 496
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=31.57 E-value=29 Score=33.56 Aligned_cols=86 Identities=9% Similarity=0.048 Sum_probs=51.2
Q ss_pred CEEEEECCcc-Ccccc---cCCCceEEEEeCCHHHHHHHHHc----CCeEEEeeCCCCCCCCCceeEEEeccchhhcCCh
Q 017080 124 SLVLDAGCGN-GKYLG---LNPDCFFVGCDISPSLIKICVDR----GHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTE 195 (377)
Q Consensus 124 ~~vLDiGcG~-G~~~~---~~~~~~v~gvD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~ 195 (377)
.+|.=||+|. |..+. ...+.+|+++|.++..++...+. ++.. ..|..++--..+..|+|+.. ++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~-~~s~~e~v~~l~~aDvVila-----vp~~ 79 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVF-TKTLEEFVGSLEKPRRIMLM-----VQAG 79 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEE-CSSHHHHHHTBCSSCEEEEC-----CCTT
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEE-eCCHHHHHhhccCCCEEEEE-----ccCc
Confidence 4688899987 55322 13466899999999888776654 2221 11221110000236888875 4442
Q ss_pred HHHHHHHHHHHHccccCcEE
Q 017080 196 SRRKKAIEELVRVVKKGSLV 215 (377)
Q Consensus 196 ~~~~~~l~~~~r~LkpgG~l 215 (377)
.....+++++...|+||..+
T Consensus 80 ~~v~~vl~~l~~~l~~g~ii 99 (474)
T 2iz1_A 80 AATDATIKSLLPLLDIGDIL 99 (474)
T ss_dssp HHHHHHHHHHGGGCCTTCEE
T ss_pred hHHHHHHHHHHhhCCCCCEE
Confidence 22567788888889887643
No 497
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=30.98 E-value=8.5 Score=35.56 Aligned_cols=86 Identities=15% Similarity=0.050 Sum_probs=49.4
Q ss_pred CCCEEEEECCcc-Ccc-cc--cCCCceEEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChHH
Q 017080 122 SGSLVLDAGCGN-GKY-LG--LNPDCFFVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTESR 197 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~-~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~~ 197 (377)
.|++|.=||.|. |.- +. ..-+.+|++.|.++...+.+...++.+ .++.++ -...|+|+..-.+.- .
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~--~~l~el---l~~aDvV~l~~P~t~--~--- 213 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ--VACSEL---FASSDFILLALPLNA--D--- 213 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE--CCHHHH---HHHCSEEEECCCCST--T---
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee--CCHHHH---HhhCCEEEEcCCCCH--H---
Confidence 578999999998 653 22 255779999999874344444444322 232221 134588887543210 0
Q ss_pred HHHH-HHHHHHccccCcEEEE
Q 017080 198 RKKA-IEELVRVVKKGSLVLI 217 (377)
Q Consensus 198 ~~~~-l~~~~r~LkpgG~l~i 217 (377)
-..+ -++....+|||.+++=
T Consensus 214 t~~li~~~~l~~mk~gailIN 234 (330)
T 4e5n_A 214 TLHLVNAELLALVRPGALLVN 234 (330)
T ss_dssp TTTCBCHHHHTTSCTTEEEEE
T ss_pred HHHHhCHHHHhhCCCCcEEEE
Confidence 1112 2457788898865443
No 498
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=30.89 E-value=24 Score=31.52 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCceeEEEecc----chhhcCChHH----HHHHHHHHHHccccCcEEEEEEcCCC
Q 017080 177 SDFGDAAISIA----VLHHLSTESR----RKKAIEELVRVVKKGSLVLITVWAVE 223 (377)
Q Consensus 177 ~~~fD~V~~~~----~l~h~~~~~~----~~~~l~~~~r~LkpgG~l~i~~~~~~ 223 (377)
-+.||+|+++. -.||...=++ ..-+-....+.|+|||.+++..+...
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA 263 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA 263 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc
Confidence 38999999964 3455432121 33344566789999999999877654
No 499
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=30.89 E-value=1e+02 Score=26.46 Aligned_cols=99 Identities=9% Similarity=0.004 Sum_probs=59.3
Q ss_pred CCCCEEEEECCc--cCc--c-ccc--CCCceEEEEeCCHHHHHHHHH---c--CCeEEEeeCCCCC-----C-----CCC
Q 017080 121 PSGSLVLDAGCG--NGK--Y-LGL--NPDCFFVGCDISPSLIKICVD---R--GHEVLVADAVNLP-----Y-----RSD 178 (377)
Q Consensus 121 ~~~~~vLDiGcG--~G~--~-~~~--~~~~~v~gvD~s~~~~~~a~~---~--~~~~~~~d~~~~~-----~-----~~~ 178 (377)
.++++||=.|++ .|. . +.. ..+++|+.++.+....+...+ . .+.++.+|+.+.. + .-+
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 457899999975 554 2 221 467899999887543333222 1 4788899987732 0 114
Q ss_pred ceeEEEeccchhhc----------CChHHHH-----------HHHHHHHHccccCcEEEEEE
Q 017080 179 FGDAAISIAVLHHL----------STESRRK-----------KAIEELVRVVKKGSLVLITV 219 (377)
Q Consensus 179 ~fD~V~~~~~l~h~----------~~~~~~~-----------~~l~~~~r~LkpgG~l~i~~ 219 (377)
..|+++.+..+... .+.+++. .+++.+...++++|.+++..
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 78999887654331 1222222 34455666677778776654
No 500
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=30.17 E-value=5.8 Score=37.28 Aligned_cols=87 Identities=21% Similarity=0.184 Sum_probs=49.2
Q ss_pred CCCEEEEECCcc-Cccc-c--cCCCce-EEEEeCCHHHHHHHHHcCCeEEEeeCCCCCCCCCceeEEEeccchhhcCChH
Q 017080 122 SGSLVLDAGCGN-GKYL-G--LNPDCF-FVGCDISPSLIKICVDRGHEVLVADAVNLPYRSDFGDAAISIAVLHHLSTES 196 (377)
Q Consensus 122 ~~~~vLDiGcG~-G~~~-~--~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~V~~~~~l~h~~~~~ 196 (377)
.|++|.=||+|. |.-. . ...+.+ |++.|.++...+.+.+.++... .++.++ -...|+|+..-.+.--
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-~~l~el---l~~aDvV~l~~P~t~~---- 234 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-ENIEEL---VAQADIVTVNAPLHAG---- 234 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-SSHHHH---HHTCSEEEECCCCSTT----
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-CCHHHH---HhcCCEEEECCCCChH----
Confidence 578999999988 6532 2 245676 9999988754555554443321 122211 1245988886544210
Q ss_pred HHHHHH-HHHHHccccCcEEEE
Q 017080 197 RRKKAI-EELVRVVKKGSLVLI 217 (377)
Q Consensus 197 ~~~~~l-~~~~r~LkpgG~l~i 217 (377)
...++ ++....+|||+.++-
T Consensus 235 -t~~li~~~~l~~mk~ga~lIn 255 (364)
T 2j6i_A 235 -TKGLINKELLSKFKKGAWLVN 255 (364)
T ss_dssp -TTTCBCHHHHTTSCTTEEEEE
T ss_pred -HHHHhCHHHHhhCCCCCEEEE
Confidence 11222 345677898765433
Done!