BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017082
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1EBV7|BASS2_ARATH Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis
thaliana GN=BASS2 PE=2 SV=1
Length = 409
Score = 532 bits (1370), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/331 (80%), Positives = 297/331 (89%), Gaps = 8/331 (2%)
Query: 36 QAHLDLRGGLSAIDHGKSLAIE-SKPQNHIVALAAPYSIIQNSRCSQVLCKAAANVSGDV 94
Q HLD +S + G SL I+ SKP + + AL A S +V+CKAAA VSGD+
Sbjct: 31 QTHLDFPKLVSVSNSGISLRIQNSKPISPVFALEATSS-------RRVVCKAAAGVSGDL 83
Query: 95 PSKSPGGMSQYEQIIEILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMG 154
P +P +SQYE+IIE+LTTLFP+WVILGT++GI+KPS VTWLETDLFT+GLGFLMLSMG
Sbjct: 84 PESTPKELSQYEKIIELLTTLFPLWVILGTLVGIFKPSLVTWLETDLFTLGLGFLMLSMG 143
Query: 155 LTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQ 214
LTLTFEDFRRCLRNPWTVG+GFLAQY+IKP+LGF+IAMTLKLSAPLATGLILVSCCPGGQ
Sbjct: 144 LTLTFEDFRRCLRNPWTVGVGFLAQYMIKPILGFLIAMTLKLSAPLATGLILVSCCPGGQ 203
Query: 215 ASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLV 274
ASNVATYISKGNVALSVLMTTCSTIGAI+MTPLLTKLLAGQLVPVDAAGLA+STFQVVLV
Sbjct: 204 ASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLV 263
Query: 275 PTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIGQVSAVLKTQGAQLIFPVALL 334
PT++GVLANEFFPKFTSKII+VTPLIGVILTTLLCASPIGQV+ VLKTQGAQLI PVALL
Sbjct: 264 PTIIGVLANEFFPKFTSKIITVTPLIGVILTTLLCASPIGQVADVLKTQGAQLILPVALL 323
Query: 335 HAAAFALGYWLSKISFGESTSRTISIECGMQ 365
HAAAFA+GYW+SK SFGESTSRTISIECGMQ
Sbjct: 324 HAAAFAIGYWISKFSFGESTSRTISIECGMQ 354
>sp|Q5VRB2|BASS2_ORYSJ Probable sodium/metabolite cotransporter BASS2, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS2 PE=2 SV=1
Length = 419
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/289 (86%), Positives = 270/289 (93%), Gaps = 1/289 (0%)
Query: 78 RCSQVLCKAAANVSGDVPSKSPGGMSQYEQIIEILTTLFPVWVILGTIIGIYKPSAVTWL 137
R Q+LCKA AN+S ++P P +QYE+I+E+LTTLFPVWVILGTIIGIYKPS VTWL
Sbjct: 76 RSCQLLCKAEANISSNLPESIPSEANQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTWL 135
Query: 138 ETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLS 197
ETDLFT+GLGFLMLSMGLTLTFEDFRRC+RNPWTVG+GFLAQYLIKPMLGF IAMTLKLS
Sbjct: 136 ETDLFTVGLGFLMLSMGLTLTFEDFRRCMRNPWTVGVGFLAQYLIKPMLGFAIAMTLKLS 195
Query: 198 APLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLV 257
APLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLV
Sbjct: 196 APLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLV 255
Query: 258 PVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIGQVS 317
PVDAAGLAISTFQVVL+PT+VGVLA+E+FPKFT +IIS+TPLIGV+LTTLLCASPIGQVS
Sbjct: 256 PVDAAGLAISTFQVVLLPTIVGVLAHEYFPKFTERIISITPLIGVLLTTLLCASPIGQVS 315
Query: 318 AVLKTQGAQLIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
VLK QG QLI PVALLH AAFALGYWLSK+ SFGESTSRTISIECGMQ
Sbjct: 316 EVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQ 364
>sp|Q93YR2|BASS1_ARATH Probable sodium/metabolite cotransporter BASS1, chloroplastic
OS=Arabidopsis thaliana GN=BASS1 PE=2 SV=1
Length = 401
Score = 228 bits (581), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 168/277 (60%), Gaps = 2/277 (0%)
Query: 91 SGDVPSKSPGGMSQYEQII-EILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFL 149
S D+P++ ++ + + E ++T FP+WV LG ++G+ +PS W+ + +GL
Sbjct: 75 SNDLPTEKKKSFGEWVEFVGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIVGLTIT 134
Query: 150 MLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSC 209
ML MG+TLT +D R L P + GFL QY + P+ F ++ L L A GLILV C
Sbjct: 135 MLGMGMTLTLDDLRGALSMPKELFAGFLLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGC 194
Query: 210 CPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTF 269
CPGG ASN+ TYI++GNVALSVLMT ST+ A++MTPLLT LA Q + VDA GL +ST
Sbjct: 195 CPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTL 254
Query: 270 QVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIGQVSAVLKTQGAQLIF 329
QVVL+P + G N++F K + V P I V +LC IGQ ++ + G Q++
Sbjct: 255 QVVLLPVLAGAFLNQYFKKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVL 314
Query: 330 PVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
LLH + F GY S+I ++SRTISIE GMQ
Sbjct: 315 ASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQ 351
>sp|Q7XVB3|BASS1_ORYSJ Probable sodium/metabolite cotransporter BASS1, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS1 PE=2 SV=2
Length = 406
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 172/295 (58%), Gaps = 16/295 (5%)
Query: 84 CKAAANVSGDVPSKSPGGMSQ------------YEQIIEILTTLFPVWVILGTIIGIYKP 131
C AAA+ PSK PGG S Q+ E+L+ FPVWV + +++P
Sbjct: 65 CHAAAD---PAPSKIPGGGSGALEAGVVGWRDLLLQVGEVLSLGFPVWVASACAVALWRP 121
Query: 132 SAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIA 191
A W+ +G+ F ML MG+TLT +D + L P + GFL QY + P+ GF+I+
Sbjct: 122 PAFLWVSPMAQIVGISFTMLGMGMTLTLDDLKTALLMPKELASGFLLQYSVMPLSGFLIS 181
Query: 192 MTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKL 251
L L + A GLILVSCCPGG ASN+ TY+++GNVALSVLMT ST A +TPLLT
Sbjct: 182 KLLNLPSYYAAGLILVSCCPGGTASNIVTYLARGNVALSVLMTAASTFAAAFLTPLLTSK 241
Query: 252 LAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCAS 311
LAGQ V VD GL +ST QVVL P ++G L N++ + + P I V +LC +
Sbjct: 242 LAGQYVAVDPMGLFVSTSQVVLAPVLLGALLNQYCNGLVQLVSPLMPFIAVATVAVLCGN 301
Query: 312 PIGQVSAVLKTQGAQLIFPVALLHAAAFALGYWLSK-ISFGESTSRTISIECGMQ 365
I Q ++ + + G Q++ V LHA+ F GY LS+ I S+SRTISIE GMQ
Sbjct: 302 AIAQNASAILSSGLQVVMSVCWLHASGFFFGYVLSRTIGIDISSSRTISIEVGMQ 356
>sp|Q8RXE8|BASS3_ARATH Probable sodium/metabolite cotransporter BASS3, chloroplastic
OS=Arabidopsis thaliana GN=BASS3 PE=2 SV=1
Length = 431
Score = 184 bits (468), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 153/260 (58%), Gaps = 4/260 (1%)
Query: 110 EILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNP 169
+ + L P V L + + P + TW+ DL+ LG +MLS+G+ L+ +DF + P
Sbjct: 109 QFWSALLPFVVALTAVAALSYPPSFTWVSKDLYAPALGGIMLSIGIQLSVDDFALAFKRP 168
Query: 170 WTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVAL 229
+ +GF+AQY++KP+LG ++A + G IL C G Q S+ A+ +SK +VA+
Sbjct: 169 VPLSVGFVAQYVLKPLLGVLVANAFGMPRTFYAGFILTCCVAGAQLSSYASSLSKADVAM 228
Query: 230 SVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKF 289
S+L+T+ +TI +++ TPLL+ LL G +VPVDA ++ S QVVLVP +G++ N +
Sbjct: 229 SILLTSSTTIASVIFTPLLSGLLIGSVVPVDAVAMSKSILQVVLVPITLGLVLNTYAKPV 288
Query: 290 TSKIISVTPLIGVILTTLLCASPIG-QVSAVLKTQGAQLIFPVALLHAAAFALGYWLSKI 348
+ + V P + ++ T+L SP+ S +L +G LI P+ HA AFALGYW SKI
Sbjct: 289 VTLLQPVMPFVAMVCTSLCIGSPLSINRSQILSAEGLGLIVPIVTFHAVAFALGYWFSKI 348
Query: 349 ---SFGESTSRTISIECGMQ 365
E SRTIS+ GMQ
Sbjct: 349 PGLRQEEEVSRTISLCTGMQ 368
>sp|Q6K739|BASS3_ORYSJ Probable sodium/metabolite cotransporter BASS3, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS3 PE=2 SV=1
Length = 423
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
Query: 110 EILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNP 169
+ L+ L P+ V + + P+ +W+ + + LG +MLS+G+ L+ +DF + P
Sbjct: 102 QALSALLPLVVAATAVAALGNPATFSWVSKEYYAPALGGIMLSIGIKLSIDDFALAFKRP 161
Query: 170 WTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVAL 229
+ IG++AQY++KP++G +IA + + G +L C G Q S+ A+++SKG+VAL
Sbjct: 162 VPLTIGYMAQYIVKPLMGVLIARAFGMPSAFFAGFVLTCCVSGAQLSSYASFLSKGDVAL 221
Query: 230 SVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKF 289
S+L+T+CSTI ++V+TP+LT LL G +VPVD +A S QVVLVP +G+L N +
Sbjct: 222 SILLTSCSTISSVVVTPVLTGLLIGSVVPVDGIAMAKSILQVVLVPVTLGLLLNTYAKAV 281
Query: 290 TSKIISVTPLIGVILTTLLCASPIG-QVSAVLKTQGAQLIFPVALLHAAAFALGYWLSKI 348
+ I V P + ++ T+L SP+ S +L ++G L+ P+ H AAF +GYW+SK+
Sbjct: 282 VNVIQPVMPFVAMLCTSLCIGSPLAINRSKILSSEGFLLLLPIVTFHIAAFIVGYWISKL 341
Query: 349 SF---GESTSRTISIECGMQ 365
E RTIS+ GMQ
Sbjct: 342 PMLRQEEPVCRTISVCTGMQ 361
>sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter YocS OS=Bacillus
subtilis (strain 168) GN=yocS PE=3 SV=1
Length = 321
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 151/253 (59%), Gaps = 6/253 (2%)
Query: 116 FPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIG 175
F +WVI+ ++G PS TW+ + + TI LG +M MGLTL +DF+ +R PW V IG
Sbjct: 15 FGIWVIVFAVLGFSFPSLFTWISSYI-TIFLGIIMFGMGLTLQADDFKELVRKPWQVIIG 73
Query: 176 FLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTT 235
+AQY I P++ F +A L L A +A G+ILV CCPGG ASNV T+++KGN ALSV +TT
Sbjct: 74 VIAQYTIMPLVAFGLAFGLHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTALSVAVTT 133
Query: 236 CSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIIS 295
ST+ A V+TPLL L A + +PV L IS Q VL P + G++ FF K +K +
Sbjct: 134 ISTLLAPVVTPLLIMLFAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVH 193
Query: 296 VTPLIGVI-LTTLLCASPIGQVSAVLKTQGAQLIFPVALLHAA-AFALGYWLSK-ISFGE 352
PL+ VI + ++ A G +L Q LIF V +LH + LG+ +K +
Sbjct: 194 ALPLVSVIGIVAIVSAVVSGNRENLL--QSGLLIFSVVILHNGIGYLLGFLCAKLLKMDY 251
Query: 353 STSRTISIECGMQ 365
+ + I+IE GMQ
Sbjct: 252 PSQKAIAIEVGMQ 264
>sp|Q8VYY4|BASS6_ARATH Probable sodium/metabolite cotransporter BASS6, chloroplastic
OS=Arabidopsis thaliana GN=BASS6 PE=2 SV=1
Length = 409
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 166/296 (56%), Gaps = 16/296 (5%)
Query: 86 AAANVS--GDVPSKSPGGMSQYEQIIEIL---TTLFPVWVILGTIIGIYKPSAVTWLETD 140
A+ N S G P P + + I++ + ++ P V+ TI+ + P + TW +
Sbjct: 66 ASDNFSEMGLDPGADPFKVIEKPSIVDRMKKANSILPHVVLASTILALIYPPSFTWFTSR 125
Query: 141 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMT----LKL 196
F LGFLM ++G+ +DF + P + +G++ QYL+KP+LGF+ + +L
Sbjct: 126 YFVPALGFLMFAVGINSNEKDFLEAFKRPKAILLGYVGQYLVKPVLGFIFGLAAVSLFQL 185
Query: 197 SAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIVMTPLLTKLLAGQ 255
P+ G++LVSC G Q SN AT+++ +A LS++MT+ ST A+++TP+L+ LL G+
Sbjct: 186 PTPIGAGIMLVSCVSGAQLSNYATFLTDPALAPLSIVMTSLSTATAVLVTPMLSLLLIGK 245
Query: 256 LVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIG- 314
+PVD G+ S QVV+ P G+L N+ FPK ++ I P++ V+ T +P+
Sbjct: 246 KLPVDVKGMISSILQVVIAPIAAGLLLNKLFPKVSNAIRPFLPILSVLDTACCVGAPLAL 305
Query: 315 QVSAVLKTQGAQLIFPVALLHAAAFALGYWLSKISF-----GESTSRTISIECGMQ 365
+++V+ GA ++ V + H +AF GY+L+ F ++ RT+S E GMQ
Sbjct: 306 NINSVMSPFGATILLLVTMFHLSAFLAGYFLTGSVFRNAPDAKAMQRTLSYETGMQ 361
>sp|F4JPW1|BASS5_ARATH Probable sodium/metabolite cotransporter BASS5, chloroplastic
OS=Arabidopsis thaliana GN=BASS5 PE=2 SV=1
Length = 407
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 160/287 (55%), Gaps = 17/287 (5%)
Query: 96 SKSPGGMSQYEQIIEILTTL------FPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFL 149
S+S ++++ I+ TL P ++L TI+ + P + TW + F GLGF+
Sbjct: 76 SESDSNELYHKKVSSIMETLKQAYSFIPHGILLSTILALVYPPSFTWFKPRYFVPGLGFM 135
Query: 150 MLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGF---VIAMTL-KLSAPLATGLI 205
M ++G+ DF L+ P + G++ QYLIKP+LG+ VIA++L L + G++
Sbjct: 136 MFAVGINSNERDFLEALKRPDAIFAGYIGQYLIKPLLGYIFGVIAVSLFNLPTSIGAGIM 195
Query: 206 LVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGL 264
LVSC G Q SN T+++ ++A LS++MT+ ST A+++TP+L+ LL G+ +PVD G+
Sbjct: 196 LVSCVSGAQLSNYTTFLTDPSLAALSIVMTSISTATAVLVTPMLSLLLIGKKLPVDVFGM 255
Query: 265 AISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIG-QVSAVLKTQ 323
S QVV+ P G+L N FP+ ++ I P + VI + +P+ + ++L
Sbjct: 256 ISSILQVVITPIAAGLLLNRLFPRLSNAIKPFLPALTVIDMSCCIGAPLALNIDSILSPF 315
Query: 324 GAQLIFPVALLHAAAFALGYWLSKISFGESTS-----RTISIECGMQ 365
GA ++F V H AF GY+ + F ++ RTIS E GMQ
Sbjct: 316 GATILFLVITFHLLAFVAGYFFTGFFFSKAPDVKALQRTISYETGMQ 362
>sp|Q650U0|BASS5_ORYSJ Probable sodium/metabolite cotransporter BASS5, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS5 PE=2 SV=1
Length = 401
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 150/270 (55%), Gaps = 11/270 (4%)
Query: 107 QIIEILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCL 166
+I++ T+ P V+ TI+ + P + TW T + LGFLM ++G+ + +DF +
Sbjct: 86 KILKSANTIIPHVVLGSTILALVYPPSFTWFTTRYYAPALGFLMFAVGVNSSVKDFIEAI 145
Query: 167 RNPWTVGIGFLAQYLIKPMLGFV---IAMTL-KLSAPLATGLILVSCCPGGQASNVATYI 222
+ P + G++ Q++IKP LGF+ +A+T+ L L G++LVSC G Q SN AT++
Sbjct: 146 QRPDAIAAGYVGQFIIKPFLGFLFGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFL 205
Query: 223 SKGNVA-LSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVVGVL 281
+ ++A LS++MT+ ST A+ +TP L+ L G+ +PVD G+ S Q+V+ P G+L
Sbjct: 206 TDPHMAPLSIVMTSLSTATAVFVTPTLSYFLIGKKLPVDVKGMMSSIVQIVVAPIAAGLL 265
Query: 282 ANEFFPKFTSKIISVTPLIGVILTTLLCASPIG-QVSAVLKTQGAQLIFPVALLHAAAFA 340
N + P+ S I P + V +T L SP+ + AVL G + + H ++F
Sbjct: 266 LNRYLPRLCSAIQPFLPPLSVFVTALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFI 325
Query: 341 LGYWLSKISFGESTS-----RTISIECGMQ 365
GY L+ F ES RT+S E GMQ
Sbjct: 326 AGYHLAGTWFRESADVKALQRTVSFETGMQ 355
>sp|B8BDK4|BASS5_ORYSI Probable sodium/metabolite cotransporter BASS5, chloroplastic
OS=Oryza sativa subsp. indica GN=BASS5 PE=3 SV=1
Length = 401
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 150/270 (55%), Gaps = 11/270 (4%)
Query: 107 QIIEILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCL 166
+I++ T+ P V+ TI+ + P + TW T + LGFLM ++G+ + +DF +
Sbjct: 86 KILKSANTIIPHVVLGSTILALVYPPSFTWFTTRYYAPALGFLMFAVGVNSSVKDFIEAI 145
Query: 167 RNPWTVGIGFLAQYLIKPMLGFV---IAMTL-KLSAPLATGLILVSCCPGGQASNVATYI 222
+ P + G++ Q++IKP LGF+ +A+T+ L L G++LVSC G Q SN AT++
Sbjct: 146 QRPDAIAAGYVGQFIIKPFLGFLFGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFL 205
Query: 223 SKGNVA-LSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVVGVL 281
+ ++A LS++MT+ ST A+ +TP L+ L G+ +PVD G+ S Q+V+ P G+L
Sbjct: 206 TDPHMAPLSIVMTSLSTATAVFVTPTLSYFLIGKKLPVDVKGMMSSIVQIVVAPIAAGLL 265
Query: 282 ANEFFPKFTSKIISVTPLIGVILTTLLCASPIG-QVSAVLKTQGAQLIFPVALLHAAAFA 340
N + P+ S I P + V +T L SP+ + AVL G + + H ++F
Sbjct: 266 LNRYLPRLCSAIQPFLPPLSVFVTALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFI 325
Query: 341 LGYWLSKISFGESTS-----RTISIECGMQ 365
GY L+ F ES RT+S E GMQ
Sbjct: 326 AGYHLAGTWFRESADVKALQRTVSFETGMQ 355
>sp|Q28727|NTCP2_RABIT Ileal sodium/bile acid cotransporter OS=Oryctolagus cuniculus
GN=SLC10A2 PE=2 SV=1
Length = 347
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 24/241 (9%)
Query: 139 TDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSA 198
+ + TI L +M SMG + + F +R PW + IGFL Q+ I P+ GFV+A+ +
Sbjct: 36 STVLTILLALVMFSMGCNVEIKKFLGHIRRPWGIFIGFLCQFGIMPLTGFVLAVAFGIMP 95
Query: 199 PLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAG 254
A ++++ CCPGG ASN+ Y G++ LSV MTTCST+ A+ M PL TK+
Sbjct: 96 IQAVVVLIMGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLYVYTKMWVD 155
Query: 255 Q---LVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCAS 311
++P D G ++ ++VP +G+ N +P+ I+ V + G +L L
Sbjct: 156 SGTIVIPYDNIG---TSLVALVVPVSIGMFVNHKWPQKAKIILKVGSIAGAVLIVL---- 208
Query: 312 PIGQVSAVLKTQGAQLIFPV-----ALLHAAAFALGYWLSKISFGES--TSRTISIECGM 364
I V +L Q A +I P + A ++LG++L++I+ G+ RT+++E GM
Sbjct: 209 -IAVVGGILY-QSAWIIEPKLWIIGTIFPMAGYSLGFFLARIA-GQPWYRCRTVALETGM 265
Query: 365 Q 365
Q
Sbjct: 266 Q 266
>sp|Q12908|NTCP2_HUMAN Ileal sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A2
PE=1 SV=2
Length = 348
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 126/240 (52%), Gaps = 22/240 (9%)
Query: 139 TDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSA 198
+ + TI L +M SMG + + F ++ PW + +GFL Q+ I P+ GF++++ +
Sbjct: 35 STVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILP 94
Query: 199 PLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAG 254
A ++++ CCPGG ASN+ Y G++ LSV MTTCST+ A+ M PL TK+
Sbjct: 95 LQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVD 154
Query: 255 Q---LVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCAS 311
++P D G ++ + ++VP +G+ N +P+ I+ + + G IL L
Sbjct: 155 SGSIVIPYDNIGTSLVS---LVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVL---- 207
Query: 312 PIGQVSAVLKTQGAQLIFPV-----ALLHAAAFALGYWLSKIS-FGESTSRTISIECGMQ 365
I V +L Q A +I P + A ++LG+ L++I+ RT++ E GMQ
Sbjct: 208 -IAVVGGILY-QSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQ 265
>sp|Q60414|NTCP2_CRIGR Ileal sodium/bile acid cotransporter OS=Cricetulus griseus
GN=SLC10A2 PE=2 SV=1
Length = 348
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 24/241 (9%)
Query: 139 TDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSA 198
+ + TI L +M SMG + F LR PW + +GFL Q+ I P+ GFV+++ +
Sbjct: 35 STVLTILLALVMFSMGCNVELHKFLGHLRRPWGIVVGFLCQFGIMPLTGFVLSVAFGILP 94
Query: 199 PLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAG 254
A +++ CCPGG ASN+ Y G++ LSV MTTCST+ A+ M PL TK+
Sbjct: 95 VQAVVVLIQGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLFIYTKMWVD 154
Query: 255 Q---LVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCAS 311
++P D+ G ++ +++P +G+ N +P+ I+ + + G IL L
Sbjct: 155 SGTIVIPYDSIG---TSLVALVIPVSIGMYVNHKWPQKAKIILKIGSIAGAILIVL---- 207
Query: 312 PIGQVSAVLKTQGAQLIFPV-----ALLHAAAFALGYWLSKISFGES--TSRTISIECGM 364
I V +L Q A I P + A + LG++L++I+ G+ RT+++E G+
Sbjct: 208 -IAVVGGILY-QSAWTIEPKLWIIGTIYPIAGYGLGFFLARIA-GQPWYRCRTVALETGL 264
Query: 365 Q 365
Q
Sbjct: 265 Q 265
>sp|P70172|NTCP2_MOUSE Ileal sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a2
PE=2 SV=2
Length = 348
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 24/239 (10%)
Query: 141 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPL 200
+ TI L +M SMG + F ++ PW + +GFL Q+ I P+ GF++++ +
Sbjct: 37 VLTILLAMVMFSMGCNVEVHKFLGHIKRPWGIFVGFLCQFGIMPLTGFILSVASGILPVQ 96
Query: 201 ATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAGQ- 255
A ++++ CCPGG SN+ Y G++ LSV MTTCST+ A+ M PL TK+
Sbjct: 97 AVVVLIMGCCPGGTGSNILAYWIDGDMDLSVSMTTCSTLLALGMMPLCLFVYTKMWVDSG 156
Query: 256 --LVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPI 313
++P D+ G+++ +++P G+ N +P+ I+ + + GVIL L I
Sbjct: 157 TIVIPYDSIGISLVA---LVIPVSFGMFVNHKWPQKAKIILKIGSITGVILIVL-----I 208
Query: 314 GQVSAVLKTQGAQLIFPV-----ALLHAAAFALGYWLSKISFGES--TSRTISIECGMQ 365
+ +L Q A +I P + A ++LG++L++++ G+ RT+++E GMQ
Sbjct: 209 AVIGGILY-QSAWIIEPKLWIIGTIFPIAGYSLGFFLARLA-GQPWYRCRTVALETGMQ 265
>sp|Q62633|NTCP2_RAT Ileal sodium/bile acid cotransporter OS=Rattus norvegicus
GN=Slc10a2 PE=2 SV=1
Length = 348
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 24/239 (10%)
Query: 141 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPL 200
+ TI L +M SMG + F ++ PW + +GFL Q+ I P+ GF++++ +
Sbjct: 37 VLTILLAMVMFSMGCNVEINKFLGHIKRPWGIFVGFLCQFGIMPLTGFILSVASGILPVQ 96
Query: 201 ATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAGQ- 255
A ++++ CCPGG SN+ Y G++ LSV MTTCST+ A+ M PL TK+
Sbjct: 97 AVVVLIMGCCPGGTGSNILAYWIDGDMDLSVSMTTCSTLLALGMMPLCLFIYTKMWVDSG 156
Query: 256 --LVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPI 313
++P D+ G+++ +++P +G+ N +P+ I+ + + G IL L I
Sbjct: 157 TIVIPYDSIGISLVA---LVIPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVL-----I 208
Query: 314 GQVSAVLKTQGAQLIFPV-----ALLHAAAFALGYWLSKISFGES--TSRTISIECGMQ 365
V +L Q A +I P + A ++LG++L++++ G+ RT+++E GMQ
Sbjct: 209 AVVGGILY-QSAWIIEPKLWIIGTIFPIAGYSLGFFLARLA-GQPWYRCRTVALETGMQ 265
>sp|Q14973|NTCP_HUMAN Sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A1 PE=2 SV=1
Length = 349
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 23/235 (9%)
Query: 146 LGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLI 205
L F+MLS+G T+ F + L P + I +AQY I P+ FV+ +L A ++
Sbjct: 35 LFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAIL 94
Query: 206 LVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVD----- 260
+ C PGG SNV + KG++ LS++MTTCST A+ M PLL + + + D
Sbjct: 95 VCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKV 154
Query: 261 -AAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIGQVSAV 319
G+ IS +VL+P +G++ P++ +I G ++ LLC+ + +SA+
Sbjct: 155 PYKGIVIS-LVLVLIPCTIGIVLKSKRPQYMRYVIK-----GGMIIILLCSVAVTVLSAI 208
Query: 320 LKTQGAQLIFPV--------ALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
G ++F + +L+ F LGY LS + RT+S+E G Q
Sbjct: 209 --NVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQ 261
>sp|Q9CXB2|SOAT_MOUSE Solute carrier family 10 member 6 OS=Mus musculus GN=Slc10a6 PE=2
SV=1
Length = 373
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 24/263 (9%)
Query: 126 IGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPM 185
+G+ + + L T L + +G +M S G ++ + LR PW + +G L+Q+ + P+
Sbjct: 22 VGMEGHANLKLLFTVLSAVMVGLVMFSFGCSVESQKLWLHLRRPWGIAVGLLSQFGLMPL 81
Query: 186 LGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMT 245
+++A+ L A ++++ CPGG SNV T+ G++ LS+ MTTCST+ A+ M
Sbjct: 82 TAYLLAIGFGLKPFQAIAVLMMGSCPGGTISNVLTFWVDGDMDLSISMTTCSTVAALGMM 141
Query: 246 PL----LTK---LLAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTP 298
PL T+ L ++P + G+ + + ++VP GV N +PK + I+ V
Sbjct: 142 PLCLYIYTRSWTLTQNLVIPYQSIGITLVS---LVVPVASGVYVNYRWPKQATVILKVGA 198
Query: 299 LIGVILTTLLCASPIGQVSAVLKTQGAQL-----IFPVALLHAAAFALGYWLSKISFGES 353
++G +L LL + G V A L IFP+ + H F L + L+ S+
Sbjct: 199 ILGGML--LLVVAVTGMVLAKGWNTDVTLLVISCIFPL-VGHVTGFLLAF-LTHQSW--Q 252
Query: 354 TSRTISIECG---MQVCICFVSI 373
RTISIE G +Q+CI + +
Sbjct: 253 RCRTISIETGAQNIQLCIAMLQL 275
>sp|A6QP84|SOAT_BOVIN Solute carrier family 10 member 6 OS=Bos taurus GN=SLC10A6 PE=2
SV=2
Length = 377
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 146 LGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLI 205
+G LM S+G ++ + +R PW + +G L Q+ + P++ +++ ++ L A ++
Sbjct: 42 IGLLMFSLGCSVEVQKLWGHIRRPWGIAVGMLCQFGLMPLIAYLLIISFSLKPLQAIAVL 101
Query: 206 LVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKL--LAGQL-----VP 258
++ CCPGG SN+ T+ G++ LS+ MTTCST+ A+ M PL L L+ L +P
Sbjct: 102 IMGCCPGGTVSNIFTFWVDGDMDLSISMTTCSTMAALGMMPLCLYLYTLSWNLEQNLTIP 161
Query: 259 VDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCASPIGQV-- 316
G+ T +++P G+ N +PK + I+ + + G +L L + G V
Sbjct: 162 YQNIGI---TLVCLIIPVAFGIYVNYRWPKQSKIILKIGAIAGGLL--FLVVTGAGMVLM 216
Query: 317 ----SAVLKTQGAQLIFPVALLHAAAFALGYWLSKISFGESTSRTISIECGMQ-VCICF 370
S+ + IFP+ + HA F L L+ S+ RTIS+E G Q V +CF
Sbjct: 217 KEFWSSDIILLMISFIFPL-IGHATGFLLAL-LTHQSW--QRCRTISLETGTQNVQMCF 271
>sp|Q3KNW5|SOAT_HUMAN Solute carrier family 10 member 6 OS=Homo sapiens GN=SLC10A6 PE=1
SV=2
Length = 377
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 143 TIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLAT 202
T+ +G LM S+G ++ +R PW + +G L Q+ + P +++A++ L A
Sbjct: 39 TVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAI 98
Query: 203 GLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL------ 256
++++ CCPGG SN+ T+ G++ LS+ MTTCST+ A+ M PL L
Sbjct: 99 AVLIMGCCPGGTISNIFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNL 158
Query: 257 -VPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKII 294
+P G+ T + +P GV N +PK SKII
Sbjct: 159 TIPYQNIGI---TLVCLTIPVAFGVYVNYRWPK-QSKII 193
>sp|Q70EX6|SOAT_RAT Solute carrier family 10 member 6 OS=Rattus norvegicus GN=Slc10a6
PE=2 SV=1
Length = 370
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 32/254 (12%)
Query: 139 TDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSA 198
T L + +G +M S G ++ LR PW + +G L Q+ + P+ +++A+ L
Sbjct: 35 TVLSAVMVGLVMFSFGCSVESRKLWLHLRRPWGIAVGLLCQFGLMPLTAYLLAIGFGLKP 94
Query: 199 PLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL-- 256
A ++++ CPGG SNV T+ G++ LS+ MTTCST+ A+ M PL +
Sbjct: 95 FQAIAVLIMGSCPGGTVSNVLTFWVDGDMDLSISMTTCSTVAALGMMPLCLYVYTRSWTL 154
Query: 257 -----VPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCAS 311
+P + G+ + + ++VP G+ N +PK + I+ V +G +L ++
Sbjct: 155 PQSLTIPYQSIGITLVS---LVVPVASGIYVNYRWPKQATFILKVGAAVGGMLLLVVA-- 209
Query: 312 PIGQVSAVLKTQGAQL---------IFPVALLHAAAFALGYWLSKISFGESTSRTISIEC 362
V+ V+ +G + IFP+ + H F L + L+ S+ RTISIE
Sbjct: 210 ----VTGVVLAKGWNIDVTLLVISCIFPL-VGHVMGFLLAF-LTHQSW--QRCRTISIET 261
Query: 363 G---MQVCICFVSI 373
G +Q+CI + +
Sbjct: 262 GAQNIQLCIAMMQL 275
>sp|P26435|NTCP_RAT Sodium/bile acid cotransporter OS=Rattus norvegicus GN=Slc10a1 PE=2
SV=1
Length = 362
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 9/220 (4%)
Query: 154 GLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGG 213
G T+ F + L P V + +AQ+ I P+ F++ LS A +++ C PGG
Sbjct: 43 GCTMEFSKIKAHLWKPKGVIVALVAQFGIMPLAAFLLGKIFHLSNIEALAILICGCSPGG 102
Query: 214 QASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVD------AAGLAIS 267
SN+ T KG++ LS++MTTCS+ A+ M PLL + + + D G+ IS
Sbjct: 103 NLSNLFTLAMKGDMNLSIVMTTCSSFSALGMMPLLLYVYSKGIYDGDLKDKVPYKGIMIS 162
Query: 268 TFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTLLCA-SPIGQVSAVLKTQGAQ 326
+VL+P +G++ P + I+ +I +L+ + A S I ++++
Sbjct: 163 -LVIVLIPCTIGIVLKSKRPHYVPYILKGGMIITFLLSVAVTALSVINVGNSIMFVMTPH 221
Query: 327 LIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
L+ +L+ + F +GY LS + S RTIS+E G Q
Sbjct: 222 LLATSSLMPFSGFLMGYILSALFQLNPSCRRTISMETGFQ 261
>sp|O08705|NTCP_MOUSE Sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a1 PE=2 SV=1
Length = 362
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 152 SMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCP 211
S+G T+ F + P V I +AQY I P+ F++ L++ A +++ C P
Sbjct: 41 SLGCTMEFSKIKAHFWKPKGVIIAIVAQYGIMPLSAFLLGKVFHLTSIEALAILICGCSP 100
Query: 212 GGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVD------AAGLA 265
GG SN+ T KG++ LS++MTTCS+ A+ M PLL + + + D G+
Sbjct: 101 GGNLSNLFTLAMKGDMNLSIVMTTCSSFTALGMMPLLLYIYSKGIYDGDLKDKVPYKGIM 160
Query: 266 ISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILT---TLLCASPIGQVSAVLKT 322
+S +VL+P +G+ P + ++ +I L+ T+L +G ++++
Sbjct: 161 LS-LVMVLIPCAIGIFLKSKRPHYVPYVLKAGMIITFSLSVAVTVLSVINVG--NSIMFV 217
Query: 323 QGAQLIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
L+ +L+ F +GY LS + S RTIS+E G Q
Sbjct: 218 MTPHLLATSSLMPFTGFLMGYILSALFRLNPSCRRTISMETGFQ 261
>sp|P09131|P3_HUMAN P3 protein OS=Homo sapiens GN=SLC10A3 PE=2 SV=1
Length = 477
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 152 SMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCP 211
S G + E + +++P + +G L Q+L+ P+ F++A L LA GLI+ P
Sbjct: 206 SFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIITCSSP 265
Query: 212 GGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAIS---- 267
GG S + + + G+V L++ MT ST+ A PL + + + L + + IS
Sbjct: 266 GGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILG 325
Query: 268 TFQVVLVPTVVGVLANEFFPKFTSKIISV 296
T + +P VGVL PKF+ ++ V
Sbjct: 326 TLLFIAIPIAVGVLIKSKLPKFSQLLLQV 354
>sp|Q0V8N6|P3_BOVIN P3 protein OS=Bos taurus GN=SLC10A3 PE=2 SV=1
Length = 477
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 152 SMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCP 211
S G + E + L+NP + +G L Q+L+ P F++A L LA GLI+ P
Sbjct: 206 SFGCKVELEVLKGLLQNPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLIITCSSP 265
Query: 212 GGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL-------VPVDAAGL 264
GG S + + + G+V L++ MT ST+ A PL + + + L VPV
Sbjct: 266 GGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAIYSRLLSIHETLHVPVSK--- 322
Query: 265 AISTFQVVLVPTVVGVLANEFFPKFTSKIISV 296
+ T + +P GV+ PKF+ ++ V
Sbjct: 323 ILGTLLFIAIPIAAGVVIKSKLPKFSQLLLHV 354
>sp|P21129|P3_MOUSE P3 protein OS=Mus musculus GN=Slc10a3 PE=2 SV=2
Length = 473
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 152 SMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCP 211
S G + E + L++P + +G L Q+L+ P F++A L LA GLI+ P
Sbjct: 202 SFGCKVELEVLKELLQSPQPMLLGLLGQFLVMPFYAFLMAKVFMLPKALALGLIITCSSP 261
Query: 212 GGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAIS---- 267
GG S + + + G+V L++ MT ST+ A PL + + + L + + IS
Sbjct: 262 GGGGSYLFSLLLGGDVTLAISMTFISTVAATGFLPLSSAIYSYLLSIHETLHVPISKILG 321
Query: 268 TFQVVLVPTVVGVLANEFFPKFTSKIISV 296
T + +P GV+ PKF+ ++ V
Sbjct: 322 TLLFIAIPIAAGVVIKSKLPKFSELLLQV 350
>sp|Q5PT55|NTCP5_HUMAN Sodium/bile acid cotransporter 5 OS=Homo sapiens GN=SLC10A5 PE=1
SV=1
Length = 438
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 25/228 (10%)
Query: 152 SMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCP 211
+ G + + F+ + P V +G + Q+ + P GF+++ + L A G+++ CP
Sbjct: 157 AFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCP 216
Query: 212 GGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL-------VPVDAAGL 264
GG + + G+ L++LMT ST+ A++M P+ + + + L +PV
Sbjct: 217 GGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGTFHIPVSK--- 273
Query: 265 AISTFQVVLVPTVVGVLANEFFPK---FTSKIIS----VTPLIGVILTTLLCASPIGQVS 317
+ST +LVP +G++ P+ F +II + +G+ LT +G V
Sbjct: 274 IVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTF-----TVGLV- 327
Query: 318 AVLKTQGAQLIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGM 364
LKT ++I L+ A GY +K+ + +T++IE GM
Sbjct: 328 -FLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGM 374
>sp|Q3UEZ8|NTCP4_MOUSE Sodium/bile acid cotransporter 4 OS=Mus musculus GN=Slc10a4 PE=2
SV=1
Length = 437
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 17/228 (7%)
Query: 150 MLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSC 209
ML +G T+ F +R P + L Q+ P+L F++A+ KL A ++L C
Sbjct: 117 MLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLPLLAFLLALIFKLDEVAAVAVLLCGC 176
Query: 210 CPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAG--------QLVPVDA 261
CPGG SN+ + + G++ LS++MT ST+ A+V+ PL + + QL+P+ A
Sbjct: 177 CPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSRAWINTPLVQLLPLGA 236
Query: 262 AGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISV---TPLIGVILTTLLCASPIGQVSA 318
L + + L+P +GV + + I+ V + L+ +++ ++ + +G
Sbjct: 237 VTLTLCS---TLIPIGLGVFIRYKYNRVADYIVKVSLWSLLVTLVVLFIMTGTMLGP--E 291
Query: 319 VLKTQGAQLIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
+L + A + + A +A GY L+ + + RT+ +E G Q
Sbjct: 292 LLASIPATVYVVAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQ 339
>sp|Q4JLT5|NTCP5_RAT Sodium/bile acid cotransporter 5 OS=Rattus norvegicus GN=Slc10a5
PE=2 SV=1
Length = 434
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 167 RNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGN 226
+ P + +G + Q+ + P GF+++ L LS A G ++ CPGG + + +G+
Sbjct: 170 KRPLPILLGAVTQFFLMPFCGFLLSQILGLSKAQAFGFVMTCTCPGGGGGYLFALLLEGD 229
Query: 227 VALSVLMTTCSTIGAIVMTPLLTKL------LAGQL-VPVDAAGLAISTFQVVLVPTVVG 279
V L++LM ST A++M P+ + L LAG VPV +ST +L P +G
Sbjct: 230 VTLAILMACTSTSLALIMMPVNSYLYSCLLGLAGVFHVPVLK---IVSTLLFILTPVSIG 286
Query: 280 VLANEFFPKFTSKIISVT-PL-IGVILTTLLCASPIGQVSAVLKTQGAQLIFPVALLHAA 337
++ PK + V PL + ++L + A +G V L+ ++ L+
Sbjct: 287 IVIKHRMPKKAVCLERVVQPLSLTLMLVGVYLAFRMGLV--FLRMANLEVFLLGLLVPVL 344
Query: 338 AFALGYWLSKISFGE-STSRTISIECGM 364
F+ GY +K+ +T++IE GM
Sbjct: 345 GFSFGYSFAKVYLLPLPVCKTVAIESGM 372
>sp|Q5PT56|NTCP4_RAT Sodium/bile acid cotransporter 4 OS=Rattus norvegicus GN=Slc10a4
PE=2 SV=1
Length = 437
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 17/228 (7%)
Query: 150 MLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSC 209
ML +G T+ F +R P + L Q+ P+L F++A+ KL A ++L C
Sbjct: 117 MLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLPLLAFLLALAFKLDEVAAVAVLLCGC 176
Query: 210 CPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAG--------QLVPVDA 261
CPGG SN+ + + G++ LS++MT ST+ A+V+ PL + + QL+P+ A
Sbjct: 177 CPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSRAWINTPLVQLLPLGA 236
Query: 262 AGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISV---TPLIGVILTTLLCASPIGQVSA 318
L + + L+P +GV + + I+ V + L+ +++ ++ + +G
Sbjct: 237 VTLTLCS---TLIPIGLGVFIRYKYNRVADYIVKVSLCSLLVTLVVLFIMTGTMLGP--E 291
Query: 319 VLKTQGAQLIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
+L + A + + A +A GY L+ + + RT+ +E G Q
Sbjct: 292 LLASIPAAVYVVAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQ 339
>sp|Q5PT54|NTCP5_MOUSE Sodium/bile acid cotransporter 5 OS=Mus musculus GN=Slc10a5 PE=1
SV=1
Length = 434
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 24/243 (9%)
Query: 138 ETDLFTIGLGFLMLS---MGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTL 194
++ +F + L ++L+ G + F+ + + P + +G + Q+ + P GF+++ L
Sbjct: 138 DSSIFLLVLSMILLNKCAFGCKIEFQVLQTVWKRPLPILLGVVIQFFLMPFCGFLLSQIL 197
Query: 195 KLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKL--- 251
L A G ++ CPGG + + +G+V L++LMT ST A++M P+ +
Sbjct: 198 GLPKAQAFGFVMTCTCPGGGGGYLFALLLEGDVTLAILMTCTSTSLALIMMPVNSYFYSR 257
Query: 252 ---LAGQL-VPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISVTPLIGVILTTL 307
LAG VPV +ST +L+P GV+ K +K I + ++ + TL
Sbjct: 258 LLGLAGAFHVPVLK---IVSTLLFILMPMSTGVIIKH---KMPAKAICLERVVRPLSLTL 311
Query: 308 L-----CASPIGQVSAVLKTQGAQLIFPVALLHAAAFALGYWLSKISFGE-STSRTISIE 361
+ A +G V L+ ++ L+ A GY L+K+ +T+++E
Sbjct: 312 MFVGIYLAFRMGLV--FLRMANLEVFLLGLLVPALGLLFGYSLAKVYLLPLPVCKTVALE 369
Query: 362 CGM 364
GM
Sbjct: 370 TGM 372
>sp|Q96EP9|NTCP4_HUMAN Sodium/bile acid cotransporter 4 OS=Homo sapiens GN=SLC10A4 PE=2
SV=2
Length = 437
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 17/228 (7%)
Query: 150 MLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSC 209
ML +G T+ F +R P + L Q+ + P+L F++A+ KL A ++L C
Sbjct: 117 MLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLCGC 176
Query: 210 CPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAG--------QLVPVDA 261
CPGG SN+ + + G++ LS++MT ST+ A+V+ PL + + QL+P+
Sbjct: 177 CPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPLGT 236
Query: 262 AGLAISTFQVVLVPTVVGVLANEFFPKFTSKIISV---TPLIGVILTTLLCASPIGQVSA 318
L + + L+P +GV + + I+ V + L+ +++ ++ + +G
Sbjct: 237 VTLTLCS---TLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGP--E 291
Query: 319 VLKTQGAQLIFPVALLHAAAFALGYWLSKI-SFGESTSRTISIECGMQ 365
+L + A + + A +A GY L+ + + RT+ +E G Q
Sbjct: 292 LLASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQ 339
>sp|P55190|YBAS_BACSU Uncharacterized protein YbaS OS=Bacillus subtilis (strain 168)
GN=ybaS PE=4 SV=3
Length = 306
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 146 LGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLSAPLA-TGL 204
F+ + L+ F+ R L +P + + ++ P+ + + PL TGL
Sbjct: 30 FAFITFAGSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITGL 89
Query: 205 ILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGL 264
L P G S + + KGNV L++ + T+ + ++ PL LLAG V +D G+
Sbjct: 90 TLAVVIPTGITSLIWAAMYKGNVGLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGM 149
Query: 265 AISTFQVVLVPTVVGVLANE 284
+V++P+ +G+L N+
Sbjct: 150 MKGLIVMVVIPSFLGMLFNQ 169
>sp|Q58H57|CBS_MACFA Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3
Length = 551
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 166 LRNPWTVGIGFLAQYLI---KPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYI 222
L + W + GFL + + KP + L LSAPL T L VSC +
Sbjct: 386 LSDRWMLQKGFLKEEDLMEKKPWWWHLRVQELSLSAPL-TVLPTVSC-----EHTIEILR 439
Query: 223 SKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAIST-FQVVLVPTVVGVL 281
KG V+ +G + + +L+ LLAG++ P D G I T F+ + + +G L
Sbjct: 440 EKGFDQAPVVDEAGVILGMVTLGNMLSSLLAGKVQPSDQVGKVIYTQFKQIRLTDTLGRL 499
Query: 282 AN 283
++
Sbjct: 500 SH 501
>sp|Q6ESG1|BASS4_ORYSJ Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS4 PE=3 SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 146 LGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLI-KPMLGFVIAMTLKLSAPLATGL 204
G ++S GLTL ++ L W G+ LA L+ P L I TGL
Sbjct: 129 FGIFLIS-GLTLRTKELGAAL-EAWPAGLFGLASILLFTPFLAQFIMQIKFFPHEFITGL 186
Query: 205 ILVSCCPGGQASNVA-TYISKGNVALSVLMTTCSTIGAIVMTPL-LTKLLA-GQLVPVDA 261
+ C P +S V T + GN AL++ MT S + I++ PL L K + G V +
Sbjct: 187 AMFCCMPTTLSSGVTLTQLVGGNTALALAMTAISNLLGIMIVPLSLAKYIGVGAGVSLPT 246
Query: 262 AGLAISTFQVVLVPTVVGVLANE 284
L S +L+P ++G +A E
Sbjct: 247 EKLFKSLVTTLLIPIILGKVARE 269
>sp|B8AJ09|BASS4_ORYSI Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Oryza sativa subsp. indica GN=BASS4 PE=3 SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 146 LGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLI-KPMLGFVIAMTLKLSAPLATGL 204
G ++S GLTL ++ L W G+ LA L+ P L I TGL
Sbjct: 129 FGIFLIS-GLTLRTKELGAAL-EAWPAGLFGLASILLFTPFLAQFIMQIKFFPHEFITGL 186
Query: 205 ILVSCCPGGQASNVA-TYISKGNVALSVLMTTCSTIGAIVMTPL-LTKLLA-GQLVPVDA 261
+ C P +S V T + GN AL++ MT S + I++ PL L K + G V +
Sbjct: 187 AMFCCMPTTLSSGVTLTQLVGGNTALALAMTAISNLLGIMIVPLSLAKYIGVGAGVSLPT 246
Query: 262 AGLAISTFQVVLVPTVVGVLANE 284
L S +L+P ++G +A E
Sbjct: 247 EKLFKSLVTTLLIPIILGKVARE 269
>sp|P32232|CBS_RAT Cystathionine beta-synthase OS=Rattus norvegicus GN=Cbs PE=1 SV=3
Length = 561
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 166 LRNPWTVGIGFLAQYL--IKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYIS 223
L + W + GF+ + L +P + L LSAPL T L V+C +A
Sbjct: 383 LSDKWMLQKGFMKEELSVKRPWWWHLRVQELSLSAPL-TVLPTVTC-----EHTIAILRE 436
Query: 224 KGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAA-GLAISTFQVVLVPTVVGVLA 282
KG V+ + + +G + + +L+ LLAG++ P D + F+ + + +G+L+
Sbjct: 437 KGFDQAPVVNESGAILGMVTLGNMLSSLLAGKVRPSDEVCKVLYKQFKPIHLTDTLGMLS 496
Query: 283 N 283
+
Sbjct: 497 H 497
>sp|Q91WT9|CBS_MOUSE Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3
Length = 561
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 166 LRNPWTVGIGFLAQYL--IKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYIS 223
L + W + GF+ + L +P + L LSAPL T L V+C +A
Sbjct: 383 LSDKWMLQKGFMKEELSVKRPWWWRLRVQELSLSAPL-TVLPTVTC-----EDTIAILRE 436
Query: 224 KGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAA-GLAISTFQVVLVPTVVGVLA 282
KG V+ + + +G + + +L+ LLAG++ P D + F+ + + +G L+
Sbjct: 437 KGFDQAPVVNESGAILGMVTLGNMLSSLLAGKVRPSDEVCKVLYKQFKPIHLTDTLGTLS 496
Query: 283 N 283
+
Sbjct: 497 H 497
>sp|Q7VXM6|RLMD_BORPE 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=rlmD PE=3 SV=1
Length = 466
Score = 35.0 bits (79), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 170 WTVGIGFLAQYLIKPML--GFVIAMTLKLSAP--LATGLILVSCCPGGQASNVATYISKG 225
W G+G+ + LI P +A L L AP ++ VSC PG A + A + +G
Sbjct: 350 WLRGLGYFDRMLIDPPREGAQAVAQALSLLAPGERPRRIVYVSCSPGTLARDAAIMVHEG 409
Query: 226 NVALS 230
AL
Sbjct: 410 GYALR 414
>sp|Q641Z1|LIN54_RAT Protein lin-54 homolog OS=Rattus norvegicus GN=Lin54 PE=2 SV=2
Length = 749
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 167 RNPWTVGIGFLAQYLI--KPMLGF-VIAMTLKLSAPLATGLILVSCCPGGQASNVATYIS 223
+ P T G + LI KP+ V T + S P+ TG +L PG + + IS
Sbjct: 231 KKPRTPTSGPVITKLIFAKPINSKAVTGQTTQASPPVVTGRVLSQSAPGTPSKTIT--IS 288
Query: 224 KGNVALSVLMTTCSTIGAIVMTPLLT--KLLAGQLVPVDAAGLAISTFQVVL 273
+ V S L +T T I ++PL + K + + + G++ S F+ ++
Sbjct: 289 ESGVIGSTLNSTTQTPNKIAISPLKSPNKTVKSAVQTITVGGMSTSQFKTII 340
>sp|Q6DHK8|NTCP7_DANRE Sodium/bile acid cotransporter 7 OS=Danio rerio GN=slc10a7 PE=2
SV=1
Length = 336
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 138 ETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGIGFLAQYLIKPMLGFVIAMTLKLS 197
E + + + + + GL+L E+ L + V + F Q I + LK+
Sbjct: 39 EITITYVAVSVIFFNSGLSLKTEELASALMH---VKLHFFVQTFTLVFFPIAIWLLLKVL 95
Query: 198 AP------LATGLILVSCCPGGQASNVA-TYISKGNVALSVLMTTCSTIGAIVMTPLLTK 250
A L GL V+C P +S V T GN A ++ + + IV+TPLL
Sbjct: 96 ALTAINEWLLRGLQTVACMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPLLLL 155
Query: 251 LLAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEF 285
+ G V + F V+VP +VG + F
Sbjct: 156 VFLGSSSSVPFTSIFSQLFMTVVVPLIVGQVCRRF 190
>sp|Q571G4|LIN54_MOUSE Protein lin-54 homolog OS=Mus musculus GN=Lin54 PE=2 SV=2
Length = 749
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 167 RNPWTVGIGFLAQYLI--KPMLGF-VIAMTLKLSAPLATGLILVSCCPGGQASNVATYIS 223
+ P T G + LI KP+ V T + S P+ TG +L PG + + IS
Sbjct: 231 KKPRTPTSGPVITKLIFAKPINSKAVTGQTTQASPPVVTGRVLSQSTPGTPSKTIT--IS 288
Query: 224 KGNVALSVLMTTCSTIGAIVMTPLLT--KLLAGQLVPVDAAGLAISTFQVVL 273
+ V S L +T T I ++PL + K + + + G++ S F+ ++
Sbjct: 289 ESGVIGSTLNSTTQTPNKIAISPLKSPNKTVKSAVQTITVGGMSTSQFKTII 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,356,909
Number of Sequences: 539616
Number of extensions: 4761236
Number of successful extensions: 15753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 15665
Number of HSP's gapped (non-prelim): 180
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)