BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017083
(377 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 241/342 (70%), Gaps = 7/342 (2%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
F+V +Y I IG GAYG+V +A T ++VAIKKI NAFD + +A+RTLRE+K+L+
Sbjct: 50 FDVGDEY-EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK 108
Query: 97 HMEHENVIAIKDIIRPP-KKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLL 155
H +H+N+IAIKDI+RP F VY+V +LM++DLHQII S Q LT +H +YFLYQLL
Sbjct: 109 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 156 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART--TSETD---FMTEYVVTRWY 210
RGLKY+HSA V+HRDLKPSNLL+N +C+LKIGDFG+AR TS + FMTEYV TRWY
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 211 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLG 270
RAPEL+L+ EYT AID+WSVGCI GE++ R LFPGK+YVHQL+LI ++G+P A +
Sbjct: 229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288
Query: 271 FLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ ++ R Y++ LP + + T +P A+ LL +ML F+P+ RI+ ALRHP+L
Sbjct: 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
Query: 331 QSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFN 372
HD +DEP C PF F F+ + T + I+E I E F+
Sbjct: 349 AKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 241/342 (70%), Gaps = 7/342 (2%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
F+V +Y I IG GAYG+V +A T ++VAIKKI NAFD + +A+RTLRE+K+L+
Sbjct: 51 FDVGDEY-EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK 109
Query: 97 HMEHENVIAIKDIIRPP-KKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLL 155
H +H+N+IAIKDI+RP F VY+V +LM++DLHQII S Q LT +H +YFLYQLL
Sbjct: 110 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 156 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART--TSETD---FMTEYVVTRWY 210
RGLKY+HSA V+HRDLKPSNLL+N +C+LKIGDFG+AR TS + FMTEYV TRWY
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 229
Query: 211 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLG 270
RAPEL+L+ EYT AID+WSVGCI GE++ R LFPGK+YVHQL+LI ++G+P A +
Sbjct: 230 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 289
Query: 271 FLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ ++ R Y++ LP + + T +P A+ LL +ML F+P+ RI+ ALRHP+L
Sbjct: 290 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
Query: 331 QSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFN 372
HD +DEP C PF F F+ + T + I+E I E F+
Sbjct: 350 AKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFH 391
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 356 bits (914), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 241/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 69
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 70 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 128
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 309 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 22 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 79
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 80 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 138
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 259 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 319 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 16 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 73
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 74 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 132
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 313 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 34 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 91
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 92 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 150
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 331 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 69
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 70 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 128
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 309 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 19 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 76
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 77 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 135
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 316 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 20 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 77
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 78 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 136
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 257 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 316
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 317 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 11 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 68
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 69 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 127
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 248 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 307
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 308 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 75
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 355 bits (911), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 16 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 73
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 132
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 313 PYLAQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 354 bits (909), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 75
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL+++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFL 134
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 354 bits (909), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 240/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAI+KI + F++ +RTLRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRTLRE 75
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 353 bits (907), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 353 bits (905), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYXQRTLRE 75
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 352 bits (902), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 75
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 351 bits (901), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 239/346 (69%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G F+V +Y ++ IG GAYG+V +A + + VAIKKI + F++ +RTLRE
Sbjct: 34 VKGQPFDVGPRYTQ-LQYIGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRTLRE 91
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
I++L HENVI I+DI+R + DVYIV +LM+TDL+++++S QQL++DH YFL
Sbjct: 92 IQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFL 150
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLL+N +CDLKI DFGLAR T F+TE V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y++ LP K +A FP S A+DLL++ML F+PNKRITVEEAL H
Sbjct: 271 DLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D DEPV PF F E ++ ++ELI++E+ +F P
Sbjct: 331 PYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQP 376
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 350 bits (899), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 238/346 (68%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 75
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+ E V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 350 bits (899), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 238/346 (68%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 19 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLRE 76
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 77 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 135
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN +CDLKI DFGLAR T F+ E V T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 316 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 350 bits (898), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 237/346 (68%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 16 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 73
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 132
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 253 DLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 313 PYLAQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 236/346 (68%), Gaps = 7/346 (2%)
Query: 32 VYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
V G +F+V +Y + IG GAYG+VC+A ++ + VAIKKI + F++ +RTLRE
Sbjct: 34 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLRE 91
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
IK+L HEN+I I DIIR P + DVY+V LM DL++++++ Q L++DH YFL
Sbjct: 92 IKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFL 150
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS----ETDFMTEYVVT 207
YQ+LRGLKY+HSA+VLHRDLKPSNLLLN + DLKI DFGLAR T F+TEYV T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
RWYRAPE++LN YT +IDIWSVGCIL E+++ P+FPGK Y+ QL I ++GSP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
L + + AR Y+ LP K + FPN S A+DLL+KML F+P+KRI VE+AL H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 328 PYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
PYL+ +D +DEP+ PF FD E ++ ++ELI+ E+ +F P
Sbjct: 331 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 340 bits (873), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/334 (51%), Positives = 224/334 (67%), Gaps = 18/334 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G GAYG+VC+A + T E VAIKKI FD + A RTLREIK+L+H +HEN+I I +I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
RP + FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H ++V+HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 170 DLKPSNLLLNASCDLKIGDFGLART-----------TSETDFMTEYVVTRWYRAPELLLN 218
DLKPSNLL+N++CDLK+ DFGLAR T + MTEYV TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT 196
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP-DDASLGFLRSDNA 277
+Y+ A+D+WS GCIL E+ R P+FPG+DY HQL LI +IG+P D L + S A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 278 RRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
R Y++ LP FP + +DLL++MLVFDP KRIT +EAL HPYLQ+ HD N
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 338 D----EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
D EP+ P F FD + T +++LIW E
Sbjct: 317 DEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 228/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T+ D MT YV TRWYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAP 198
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 319 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 359
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV PF FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPFDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 35 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 152
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 210
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 331 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 371
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 36 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 211
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 332 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 372
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 337 bits (865), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 26 TIWEVPERY-QNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 143
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 201
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 322 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 362
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 28 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 324 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 364
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 318 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 358
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 308 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 348
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 171/334 (51%), Positives = 223/334 (66%), Gaps = 18/334 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G GAYG+VC+A + T E VAIKKI FD + A RTLREIK+L+H +HEN+I I +I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
RP + FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H ++V+HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 170 DLKPSNLLLNASCDLKIGDFGLART-----------TSETDFMTEYVVTRWYRAPELLLN 218
DLKPSNLL+N++CDLK+ DFGLAR T + MTE V TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT 196
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP-DDASLGFLRSDNA 277
+Y+ A+D+WS GCIL E+ R P+FPG+DY HQL LI +IG+P D L + S A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 278 RRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
R Y++ LP FP + +DLL++MLVFDP KRIT +EAL HPYLQ+ HD N
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 338 D----EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
D EP+ P F FD + T +++LIW E
Sbjct: 317 DEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 337 bits (865), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 170/334 (50%), Positives = 223/334 (66%), Gaps = 18/334 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G GAYG+VC+A + T E VAIKKI FD + A RTLREIK+L+H +HEN+I I +I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
RP + FN+VYI+ ELM TDLH++I S Q L+DDH QYF+YQ LR +K +H ++V+HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 170 DLKPSNLLLNASCDLKIGDFGLART-----------TSETDFMTEYVVTRWYRAPELLLN 218
DLKPSNLL+N++CDLK+ DFGLAR T + M E+V TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP-DDASLGFLRSDNA 277
+Y+ A+D+WS GCIL E+ R P+FPG+DY HQL LI +IG+P D L + S A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 278 RRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
R Y++ LP FP + +DLL++MLVFDP KRIT +EAL HPYLQ+ HD N
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 338 D----EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
D EP+ P F FD + T +++LIW E
Sbjct: 317 DEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 28 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 324 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVPPP 364
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 28 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 324 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVPPP 364
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 318 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 358
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 27 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 144
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 202
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 323 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 363
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 36 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 211
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 332 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 372
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 14 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 131
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 189
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 310 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 350
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 337 bits (863), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 35 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 152
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 210
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 331 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 371
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 337 bits (863), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 198
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 319 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 359
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 337 bits (863), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 314 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 354
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 337 bits (863), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 39 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 156
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 214
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 335 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 375
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 337 bits (863), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 314 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 354
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 21 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 317 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 357
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 15 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 132
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 190
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 311 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 351
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 318 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 358
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 314 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 354
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 13 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 188
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 309 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 349
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 21 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 317 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 357
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 13 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 188
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 309 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 349
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 308 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 348
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T+ D MT YV TRWYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAP 198
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ E D + L + E + F P P
Sbjct: 319 HDPDDEPVA-DPYDQSLESRDLLIDEWKSLTYDEVISFVPPP 359
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 335 bits (859), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI D+GLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 335 bits (859), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ +LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-AKLTDDHVQFLIYQ 129
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 308 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 348
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPTDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/341 (49%), Positives = 226/341 (66%), Gaps = 6/341 (1%)
Query: 36 LFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++LL
Sbjct: 40 IWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 96 RHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQL 154
+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ+
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQI 157
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPE 214
LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D M YV TRWYRAPE
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXGYVATRWYRAPE 215
Query: 215 LLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS 274
++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L + S
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLH 334
++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y H
Sbjct: 276 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 335
Query: 335 DLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
D +DEPV P+ FE D + L + E + F P P
Sbjct: 336 DPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 375
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 335 bits (858), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T+ D MT YV TRWYRAP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAP 198
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ E D + L + E + F P P
Sbjct: 319 HDPDDEPVA-DPYDQSSESRDLLIDEWKSLTYDEVISFVPPP 359
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 335 bits (858), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D M +V TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 334 bits (857), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D M +V TRWYRAP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 187
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 308 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 348
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 334 bits (857), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPQDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 334 bits (857), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D M +V TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 334 bits (856), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P FE D + L + E + F P P
Sbjct: 312 HDPDDEPVAD-PRDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 334 bits (856), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 334 bits (856), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI FGLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 334 bits (856), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 318 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 358
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 333 bits (855), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DF LAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 333 bits (855), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 314 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 354
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 333 bits (855), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT V TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGXVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 333 bits (855), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI D GLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 333 bits (854), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 27 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 144
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 202
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 323 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 363
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 333 bits (854), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + PIG GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 21 TIWEVPERY-QNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 317 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 357
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 333 bits (854), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI D GLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI D GLAR T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 21 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 317 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 357
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 332 bits (852), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 225/342 (65%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 36 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D M V TRWYRAP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXGXVATRWYRAP 211
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ FE D + L + E + F P P
Sbjct: 332 HDPDDEPVA-DPYDQSFESRDLLIDEWKSLTYDEVISFVPPP 372
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 331 bits (849), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 225/342 (65%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VCAA +++T VA+KK+ F +II A+RT RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + + FNDVY+V LM DL+ I++S Q+LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS-QKLTDDHVQFLIYQ 133
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N +LKI DFGL R T D MT YV TRWYRAP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD--DEMTGYVATRWYRAP 191
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D++ QL+LI L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S++AR Y++ L + K FA F + AVDLLEKMLV D +KRIT +AL H Y
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEPV P+ E D + L + E + F P P
Sbjct: 312 HDPDDEPVA-DPYDQSLESRDLLIDEWKSLTYDEVISFVPPP 352
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/342 (47%), Positives = 223/342 (65%), Gaps = 6/342 (1%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
++EV +Y + P+G GAYG VC++ + ++ ++A+KK+ F +II A+RT RE++L
Sbjct: 45 TIWEVPERY-QTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 95 LRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQ 153
L+HM+HENVI + D+ P + FNDVY+V LM DL+ I++ Q+LTDDH Q+ +YQ
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 162
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+LRGLKY+HSA ++HRDLKPSNL +N C+LKI DFGLAR T D MT YV TRWYRAP
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 220
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E++LN Y +DIWSVGCI+ E++T LFPG D+++QL+ I L G+P + + +
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
S AR Y+ LP+ K+ FA F + AVDLLEKMLV D +KRIT EAL HPY
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 334 HDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDP 375
HD +DEP P+ FE + + L + E F P
Sbjct: 341 HDPDDEPES-EPYDQSFESRQLEIEEWKRLTYEEVCSFETPP 381
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 219/328 (66%), Gaps = 5/328 (1%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+RP+G GAYG VC+A ++ R++VA+KK+ F ++I ARRT RE++LL+H++HENVI +
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D+ P + F++VY+V LM DL+ I++ Q L+D+H Q+ +YQLLRGLKY+HSA
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+ +N C+L+I DFGLAR E MT YV TRWYRAPE++LN Y
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+ E++ + LFPG DY+ QL+ I E++G+P L + S++AR Y++ LP
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 261
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRP 345
++ ++ F + A+DLL +MLV D ++R++ EAL H Y HD DEP P
Sbjct: 262 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEA-EP 320
Query: 346 FHFDFEHSSCTEDHIRELIWRESVKFNP 373
+ E T + +EL ++E + F P
Sbjct: 321 YDESVEAKERTLEEWKELTYQEVLSFKP 348
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 218/326 (66%), Gaps = 5/326 (1%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+RP+G GAYG VC+A ++ R++VA+KK+ F ++I ARRT RE++LL+H++HENVI +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D+ P + F++VY+V LM DL+ I++S Q L+D+H Q+ +YQLLRGLKY+HSA
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+ +N +L+I DFGLAR E MT YV TRWYRAPE++LN Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+ E++ + LFPG DY+ QL+ I E++G+P L + S++AR Y++ LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRP 345
++ ++ F + A+DLL +MLV D ++R++ EAL H Y HD DEP P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEA-EP 328
Query: 346 FHFDFEHSSCTEDHIRELIWRESVKF 371
+ E T + +EL ++E + F
Sbjct: 329 YDESVEAKERTLEEWKELTYQEVLSF 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 310 bits (794), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 217/326 (66%), Gaps = 5/326 (1%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+RP+G GAYG VC+A ++ R++VA+KK+ F ++I ARRT RE++LL+H++HENVI +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D+ P + F++VY+V LM DL+ I++ Q L+D+H Q+ +YQLLRGLKY+HSA
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+ +N +L+I DFGLAR E MT YV TRWYRAPE++LN Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+ E++ + LFPG DY+ QL+ I E++G+P L + S++AR Y++ LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRP 345
++ ++ F + A+DLL +MLV D ++R++ EAL H Y HD DEP P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEA-EP 328
Query: 346 FHFDFEHSSCTEDHIRELIWRESVKF 371
+ E T + +EL ++E + F
Sbjct: 329 YDESVEAKERTLEEWKELTYQEVLSF 354
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 223/348 (64%), Gaps = 6/348 (1%)
Query: 27 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR 86
+ + V +EV + Y ++P+G GAYG VC+AV+ T +VAIKK+ F + + A+
Sbjct: 11 FYRQEVTKTAWEVRAVY-RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK 69
Query: 87 RTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDD 145
R RE++LL+HM HENVI + D+ P + D F D Y+V M TDL ++++ ++L +D
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGED 128
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 205
Q+ +YQ+L+GL+Y+H+A ++HRDLKP NL +N C+LKI DFGLAR M V
Sbjct: 129 RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--MXGXV 186
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 265
VTRWYRAPE++LN YT +DIWSVGCI+ E++T + LF G D++ QL+ I ++ G+P
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEAL 325
+ L+SD A+ Y++ LP K+ FA+ N S AV+LLEKMLV D +R+T EAL
Sbjct: 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306
Query: 326 RHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
HPY +SLHD DEP + + F+ T D + + ++E + F P
Sbjct: 307 AHPYFESLHDTEDEPQVQK-YDDSFDDVDRTLDEWKRVTYKEVLSFKP 353
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 214/348 (61%), Gaps = 6/348 (1%)
Query: 27 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR 86
+ + +V +E+ YV P +G GAYG VC+A++ + E+VAIKK+ F + I A+
Sbjct: 28 FYKQDVNKTAWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK 86
Query: 87 RTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDD 145
R RE+ LL+HM+HENVI + D+ P F D Y+V M TDL +I+ + +++
Sbjct: 87 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM--GMEFSEE 144
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 205
QY +YQ+L+GLKY+HSA V+HRDLKP NL +N C+LKI DFGLAR MT YV
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYV 202
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 265
VTRWYRAPE++L+ Y +DIWSVGCI+ E++T + LF GKDY+ QL I ++ G P
Sbjct: 203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 262
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEAL 325
+ L A+ Y++ LP+ ++ F FP S A DLLEKML D +KR+T +AL
Sbjct: 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322
Query: 326 RHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
HP+ + D +E +PF EH T D ++ I++E V F+P
Sbjct: 323 THPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 214/348 (61%), Gaps = 6/348 (1%)
Query: 27 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR 86
+ + +V +E+ YV P +G GAYG VC+A++ + E+VAIKK+ F + I A+
Sbjct: 10 FYKQDVNKTAWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK 68
Query: 87 RTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDD 145
R RE+ LL+HM+HENVI + D+ P F D Y+V M TDL +I+ + +++
Sbjct: 69 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM--GLKFSEE 126
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 205
QY +YQ+L+GLKY+HSA V+HRDLKP NL +N C+LKI DFGLAR MT YV
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYV 184
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 265
VTRWYRAPE++L+ Y +DIWSVGCI+ E++T + LF GKDY+ QL I ++ G P
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 244
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEAL 325
+ L A+ Y++ LP+ ++ F FP S A DLLEKML D +KR+T +AL
Sbjct: 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 304
Query: 326 RHPYLQSLHDLNDEPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNP 373
HP+ + D +E +PF EH T D ++ I++E V F+P
Sbjct: 305 THPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 243
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 244 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 302
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 363 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 397
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKEN 243
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 244 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 302
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 363 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 397
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 28 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 87
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 145
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 204
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 205 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 263
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 264 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 323
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 324 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 358
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 325 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 30 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 206
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 207 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 265
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 266 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 325
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 326 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 360
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 215/358 (60%), Gaps = 19/358 (5%)
Query: 24 GGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNII 83
++ V + F V +Y ++PIG GA GIVCAA ++ VAIKK+ F N
Sbjct: 1 ANQFYSVEVGDSTFTVLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT 59
Query: 84 DARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQL 142
A+R RE+ L++ + H+N+I++ ++ P K + F DVY+V ELMD +L Q+I+ +L
Sbjct: 60 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MEL 117
Query: 143 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 202
+ Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LKI DFGLART + MT
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 177
Query: 203 EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 262
YVVTR+YRAPE++L Y +DIWSVGCI+GE++ + LFPG+DY+ Q + E +G
Sbjct: 178 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 263 SPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN------------KSSGAVDLLEKM 310
+P + L+ R YV P+ F FP+ K+S A DLL KM
Sbjct: 237 TPCPEFMKKLQP-TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 311 LVFDPNKRITVEEALRHPYLQSLHDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
LV DP KRI+V++AL+HPY+ +D + E P+ + + T + +ELI++E
Sbjct: 296 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 353
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 325 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 260 bits (664), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 30 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 206
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 207 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 265
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 266 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 325
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 326 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 360
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 139
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 198
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 199 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 257
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 318 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 352
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 325 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 23 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 199
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 200 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 258
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 259 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 318
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 319 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 353
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 219/364 (60%), Gaps = 50/364 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIA 105
++ +G+GAYGIV +++ T E VA+KKI +AF N DA+RT REI +L + HEN++
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ +++R D DVY+V++ M+TDLH +IR++ L H QY +YQL++ +KY+HS
Sbjct: 74 LLNVLRA---DNDRDVYLVFDYMETDLHAVIRANI-LEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLART------------------TSETD----FMTE 203
+LHRD+KPSN+LLNA C +K+ DFGL+R+ T D +T+
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS 263
YV TRWYRAPE+LL T+YT ID+WS+GCILGEI+ +P+FPG ++QL I +I
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDF 249
Query: 264 PDDASLGFLRSDNARRYVRQLP------RCRKQQFATRFPNK----------SSGAVDLL 307
P + + ++S A+ + L + K+ T++ N + A+DLL
Sbjct: 250 PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLL 309
Query: 308 EKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPR----PFHFDFEHSSCTEDHIREL 363
+K+L F+PNKRI+ +AL+HP++ H+ N+EP C P + + +HS D R L
Sbjct: 310 DKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSI---DDYRNL 366
Query: 364 IWRE 367
++ E
Sbjct: 367 VYSE 370
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 214/361 (59%), Gaps = 19/361 (5%)
Query: 25 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIID 84
++ V + F V +Y ++PIG GA GIVCAA ++ VA+KK+ F N
Sbjct: 8 NQFYSVEVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 66
Query: 85 ARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLT 143
A+R RE+ LL+ + H+N+I++ ++ P K + F DVY+V ELMD +L Q+I +L
Sbjct: 67 AKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH--MELD 124
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
+ Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LKI DFGLART MT
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 184
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS 263
YVVTR+YRAPE++L Y A +DIWSVGCI+GE++ +F G D++ Q + E +G+
Sbjct: 185 YVVTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGT 243
Query: 264 PDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN------------KSSGAVDLLEKML 311
P + L+ R YV P+ +F FP+ K+S A DLL KML
Sbjct: 244 PSAEFMAALQP-TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKML 302
Query: 312 VFDPNKRITVEEALRHPYLQSLHDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRESVK 370
V DP+KRI+V+EALRHPY+ +D + E P+ + E + +ELI++E +
Sbjct: 303 VIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMD 362
Query: 371 F 371
+
Sbjct: 363 W 363
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSAG 139
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 198
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 199 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 257
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 318 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 352
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D + E P+ + + T + +ELI++E
Sbjct: 325 YDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 359
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 23 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 82
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 199
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 200 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 258
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 259 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 318
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 319 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 353
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 34 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 93
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 151
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 210
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 211 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 269
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 270 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 329
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 330 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 364
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 204/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 25 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIID 84
++ V + F V +Y ++PIG GA GIVCAA ++ VA+KK+ F N
Sbjct: 6 SQFYSVQVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 64
Query: 85 ARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLT 143
A+R RE+ LL+ + H+N+I++ ++ P K + F DVY+V ELMD +L Q+I +L
Sbjct: 65 AKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH--MELD 122
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
+ Y LYQ+L G+K++HSA ++HRDLKPSN+++ + C LKI DFGLART S MT
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS 263
YVVTR+YRAPE++L Y +DIWSVGCI+GE++ +F G D++ Q + E +G+
Sbjct: 183 YVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGT 241
Query: 264 PDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN------------KSSGAVDLLEKML 311
P + L+ R YV P F FP+ K+S A DLL KML
Sbjct: 242 PSAEFMAALQP-TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKML 300
Query: 312 VFDPNKRITVEEALRHPYLQSLHDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
V DP+KRI+V+EALRHPY+ +D + E P+ + E + +ELI++E
Sbjct: 301 VIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKE 357
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 257 bits (657), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 204/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 203/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 204/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 206
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 207 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 265
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 266 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 326 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 360
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 205/335 (61%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + M VVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P A + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 203/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 204/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 203/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 254 bits (649), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 191/302 (63%), Gaps = 17/302 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
Query: 334 HD 335
+D
Sbjct: 325 YD 326
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 254 bits (649), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 206/344 (59%), Gaps = 18/344 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + MT VVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRESVKFNPDPT 376
+D ++ E P+ + T + +ELI++E + PT
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDLPKRPT 368
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 202/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVG I+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 203/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 31 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 90
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 148
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + M +VVTR+YRAPE++L Y
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG-YKEN 207
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 208 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 266
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 267 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 326
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 327 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 361
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 204/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + C LKI DFGLART + M VVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 189/297 (63%), Gaps = 17/297 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIVCAA ++ VAIKK+ F N A+R RE+ L++ + H+N+I++
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVY+V ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVGCI+GE++ + LFPG+DY+ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ F FP+ K+S A DLL KMLV DP KRI+V++AL+HPY+
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 201/335 (60%), Gaps = 18/335 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++PIG GA GIV AA ++ VAIKK+ F N A+R RE+ L++ + H+N+I +
Sbjct: 29 LKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 107 KDIIRPPKK-DTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ P K + F DVYIV ELMD +L Q+I+ +L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKPSN+++ + LKI DFGLART + MT YVVTR+YRAPE++L Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKEN 205
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIWSVG I+GE++ LFPG D++ Q + E +G+P + L+ R YV P
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRP 264
Query: 286 RCRKQQFATRFPN------------KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+ F FP+ K+S A DLL KMLV D +KRI+V+EAL+HPY+
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
Query: 334 HDLND-EPVCPRPFHFDFEHSSCTEDHIRELIWRE 367
+D ++ E P+ + T + +ELI++E
Sbjct: 325 YDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKE 359
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 193/343 (56%), Gaps = 59/343 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G+YG VC A + + VAIKKI F+++ID +R LREI +L + H++V+ + DI
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
+ P + F+++Y+V E+ D+D ++ R+ LT+ H + LY LL G+KYVHSA +LHR
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHR 180
Query: 170 DLKPSNLLLNASCDLKIGDFGLARTTS--------------ETDF--------------M 201
DLKP+N L+N C +K+ DFGLART E D +
Sbjct: 181 DLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240
Query: 202 TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-----------REPLFPG--- 247
T +VVTRWYRAPEL+L YT AID+WS+GCI E++ R PLFPG
Sbjct: 241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSC 300
Query: 248 -----------------KDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQ 290
+ QL +I ++G+P + + L ++A+RY+R P+
Sbjct: 301 FPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGT 360
Query: 291 QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
A RFP S+ A+ LL++MLVF+PNKRIT+ E L HP+ + +
Sbjct: 361 DLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 203/377 (53%), Gaps = 52/377 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG+YG V A + T + VAIKK+ F+++ID +R LREI +L ++ + +I + D+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
I P F+++YIV E+ D+DL ++ ++ LT++H + LY LL G ++H + ++HR
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 170 DLKPSNLLLNASCDLKIGDFGLART-TSETDF----------------------MTEYVV 206
DLKP+N LLN C +K+ DFGLART SE D +T +VV
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 207 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM-----------TREPLFPGKD------ 249
TRWYRAPEL+L YT +IDIWS GCI E++ R PLFPG
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 250 -----YVH------QLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 298
VH QL +I +IG+P + L + +Y++ P + ++P+
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS 333
Query: 299 KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEH-SSCTE 357
S ++LLE ML F+PNKRIT+++AL HPYL+ + E + F+ +E
Sbjct: 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMVLSE 393
Query: 358 DHIRELIWRESVKFNPD 374
+R + +E F+P+
Sbjct: 394 TQLRYIFLKEVQSFHPE 410
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 193/339 (56%), Gaps = 18/339 (5%)
Query: 25 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFD---- 80
G+ ++ L + S Y R I G+YG VCA V+SE VAIK++ N
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQ-RFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRT 63
Query: 81 -NIID----ARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQI 135
NI+ +R LREI+LL H H N++ ++DI ++ + +Y+V ELM TDL Q+
Sbjct: 64 VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 136 IRSDQQL--TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR 193
I DQ++ + H QYF+Y +L GL +H A V+HRDL P N+LL + D+ I DF LAR
Sbjct: 124 IH-DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 194 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 253
+ T YV RWYRAPEL++ +T +D+WS GC++ E+ R+ LF G + +Q
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
Query: 254 LRLITELIGSPDDASLGFLRSDNARRYVRQ-LPRCRKQQFATRFPNKSSGAVDLLEKMLV 312
L I E++G+P + S +AR Y+R L + + P A+DL+ KML
Sbjct: 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE 302
Query: 313 FDPNKRITVEEALRHPYLQSLHDLND--EPVCPRPFHFD 349
F+P +RI+ E+ALRHPY +SL D D E + R FHFD
Sbjct: 303 FNPQRRISTEQALRHPYFESLFDPLDLTEGLSER-FHFD 340
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 193/339 (56%), Gaps = 18/339 (5%)
Query: 25 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFD---- 80
G+ ++ L + S Y R I G+YG VCA V+SE VAIK++ N
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQ-RFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRT 63
Query: 81 -NIID----ARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQI 135
NI+ +R LREI+LL H H N++ ++DI ++ + +Y+V ELM TDL Q+
Sbjct: 64 VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 136 IRSDQQL--TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR 193
I DQ++ + H QYF+Y +L GL +H A V+HRDL P N+LL + D+ I DF LAR
Sbjct: 124 IH-DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 194 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 253
+ T YV RWYRAPEL++ +T +D+WS GC++ E+ R+ LF G + +Q
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
Query: 254 LRLITELIGSPDDASLGFLRSDNARRYVRQ-LPRCRKQQFATRFPNKSSGAVDLLEKMLV 312
L I E++G+P + S +AR Y+R L + + P A+DL+ KML
Sbjct: 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE 302
Query: 313 FDPNKRITVEEALRHPYLQSLHDLND--EPVCPRPFHFD 349
F+P +RI+ E+ALRHPY +SL D D E + R FHFD
Sbjct: 303 FNPQRRISTEQALRHPYFESLFDPLDLTEGLSER-FHFD 340
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 198/380 (52%), Gaps = 55/380 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG+YG V A + + VAIKK+ F+++ID +R LREI +L ++ + +I + D+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
I P F+++YIV E+ D+DL ++ ++ LT+ H + LY LL G K++H + ++HR
Sbjct: 96 IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHR 155
Query: 170 DLKPSNLLLNASCDLKIGDFGLART-TSETDF-------------------------MTE 203
DLKP+N LLN C +KI DFGLART S+ D +T
Sbjct: 156 DLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM-----------TREPLFPGKD--- 249
+VVTRWYRAPEL+L YT +IDIWS GCI E++ R PLFPG
Sbjct: 216 HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFP 275
Query: 250 --------YVH------QLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 295
VH QL +I +IG+P + L + +Y++ P + +
Sbjct: 276 LSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKK 335
Query: 296 FPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPRPFHFDFEH-SS 354
+ + S +DLLE ML F+ KRIT+++AL HPYL+ + N E F+
Sbjct: 336 YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKIILPFDDWMV 395
Query: 355 CTEDHIRELIWRESVKFNPD 374
+E +R + +E F+ D
Sbjct: 396 LSETQLRYIFLKEIQSFHAD 415
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 190/325 (58%), Gaps = 21/325 (6%)
Query: 31 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR 90
N++G F++ S+Y+ ++P+G G G+V +AV+++ + VAIKKI + + LR
Sbjct: 3 NIHG--FDLGSRYMD-LKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALR 57
Query: 91 EIKLLRHMEHENVIAIKDIIRPPKKD---------TFNDVYIVYELMDTDLHQIIRSDQQ 141
EIK++R ++H+N++ + +I+ P N VYIV E M+TDL ++
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP- 116
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTT----S 196
L ++H + F+YQLLRGLKY+HSA+VLHRDLKP+NL +N LKIGDFGLAR S
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176
Query: 197 ETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRL 256
++E +VT+WYR+P LLL+ YT AID+W+ GCI E++T + LF G + Q++L
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236
Query: 257 ITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPN 316
I E I + L S Y+R + P S AVD LE++L F P
Sbjct: 237 ILESIPVVHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295
Query: 317 KRITVEEALRHPYLQSLHDLNDEPV 341
R+T EEAL HPY+ DEP+
Sbjct: 296 DRLTAEEALSHPYMSIYSFPMDEPI 320
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 75 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 247
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 297
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 72 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 244
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 69 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 67 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 67 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E +D DL + + + + + +L+QLL+GL + HS
Sbjct: 71 LDVIH-----TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 71 LDVIH-----TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 69 LDVIH-----TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 71 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 71 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 70 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 69 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 70 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 159/288 (55%), Gaps = 10/288 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 72 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 244
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 67 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 70 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 69 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 69 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 159/290 (54%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + +L+QLL+GL + HS
Sbjct: 71 LDVIH-----TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 67 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 159/290 (54%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + +L+QLL+GL + HS
Sbjct: 70 LDVIH-----TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+ KI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+ KI + +REI LL+ + H N++ +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 67 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 159/290 (54%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + +L+QLL+GL + HS
Sbjct: 71 LDVIH-----TENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + +L+QLL+GL + HS
Sbjct: 67 LDVIH-----TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL C Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 159/290 (54%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR VVT WYRAPE+LL C Y+
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 75 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL Y+
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 247
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 297
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N T E VA+KKI + +REI LL+ + H N++ +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHSA 164
D+I T N +Y+V+E + DL + + + + + +L+QLL+GL + HS
Sbjct: 68 LDVIH-----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
VLHRDLKP NLL+N +K+ DFGLAR T VVT WYRAPE+LL Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+DIWS+GCI E++TR LFPG + QL I +G+PD+ + S Y
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P+ +Q F+ P LL +ML +DPNKRI+ + AL HP+ Q +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 174/300 (58%), Gaps = 31/300 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIA 105
+ +G G YG+V A +S+ R VA+K+I +A D I + +REI LL+ + H N+++
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPST-AIREISLLKELHHPNIVS 83
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHSA 164
+ D+I + T +V+E M+ DL +++ ++ L D + +LYQLLRG+ + H
Sbjct: 84 LIDVIHSERCLT-----LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
+LHRDLKP NLL+N+ LK+ DFGLAR T VVT WYRAP++L+ +Y+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY--V 281
++DIWS+GCI E++T +PLFPG QL I ++G+P N R + V
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP-----------NPREWPQV 247
Query: 282 RQLPRCRKQQF--------ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
++LP +++ F ++ P +DLL ML FDPNKRI+ +A+ HPY + L
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 174/300 (58%), Gaps = 31/300 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIA 105
+ +G G YG+V A +S+ R VA+K+I +A D I + +REI LL+ + H N+++
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPST-AIREISLLKELHHPNIVS 83
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHSA 164
+ D+I + T +V+E M+ DL +++ ++ L D + +LYQLLRG+ + H
Sbjct: 84 LIDVIHSERCLT-----LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYT 223
+LHRDLKP NLL+N+ LK+ DFGLAR T VVT WYRAP++L+ +Y+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY--V 281
++DIWS+GCI E++T +PLFPG QL I ++G+P N R + V
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP-----------NPREWPQV 247
Query: 282 RQLPRCRKQQF--------ATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
++LP +++ F ++ P +DLL ML FDPNKRI+ +A+ HPY + L
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 158/287 (55%), Gaps = 11/287 (3%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G Y V + T VA+K+I + +RE+ LL+ ++H N++ + DI
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT-AIREVSLLKDLKHANIVTLHDI 68
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH-CQYFLYQLLRGLKYVHSASVLH 168
I K T +V+E +D DL Q + + + H + FL+QLLRGL Y H VLH
Sbjct: 69 IHTEKSLT-----LVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 169 RDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTAAID 227
RDLKP NLL+N +LK+ DFGLAR S T VVT WYR P++LL T+Y+ ID
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 228 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL-GFLRSDNARRYVRQLPR 286
+W VGCI E+ T PLFPG QL I ++G+P + + G L ++ + Y P+
Sbjct: 184 MWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY--NYPK 241
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
R + + P S DLL K+L F+ RI+ E+A++HP+ SL
Sbjct: 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 172/304 (56%), Gaps = 22/304 (7%)
Query: 40 SSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT-LREIKLLRHM 98
SS + +G G Y V +N T VA+K++ D+ T +REI L++ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV--KLDSEEGTPSTAIREISLMKEL 60
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS------DQQLTDDHCQYFLY 152
+HEN++ + D+I T N + +V+E MD DL + + S + L + +YF +
Sbjct: 61 KHENIVRLYDVIH-----TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYR 211
QLL+GL + H +LHRDLKP NLL+N LK+GDFGLAR + + VVT WYR
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA---S 268
AP++L+ Y+ +IDIWS GCIL E++T +PLFPG + QL+LI +++G+P+++ S
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235
Query: 269 LGFLRSDNARRYVRQLPRCRKQ--QFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR 326
+ L N R PR +Q Q T+ P +D L +L +P+ R++ ++AL
Sbjct: 236 VTKLPKYNPNIQQRP-PRDLRQVLQPHTKEP-LDGNLMDFLHGLLQLNPDMRLSAKQALH 293
Query: 327 HPYL 330
HP+
Sbjct: 294 HPWF 297
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 157/290 (54%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG V A N ET E VA+K++ D+ LREI LL+ ++H+N++ +
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D++ KK T +V+E D DL + S + L + + FL+QLL+GL + HS +
Sbjct: 67 HDVLHSDKKLT-----LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTA 224
VLHRDLKP NLL+N + +LK+ DFGLAR + VVT WYR P++L Y+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 225 AIDIWSVGCILGEIM-TREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
+ID+WS GCI E+ PLFPG D QL+ I L+G+P + + +
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P P ++ DLL+ +L +P +RI+ EEAL+HPY
Sbjct: 242 YP--ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 10/287 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N+ E A+KKI ++ T+REI +L+ ++H N++ +
Sbjct: 7 LEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D+I K+ + +V+E +D DL +++ + L + FL QLL G+ Y H
Sbjct: 66 YDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTA 224
VLHRDLKP NLL+N +LKI DFGLAR T VVT WYRAP++L+ +Y+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
IDIWSVGCI E++ PLFPG QL I ++G+P+ S + +Y
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPN--SKNWPNVTELPKYDPNF 238
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + +DLL KML DPN+RIT ++AL H Y +
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 10/287 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N+ E A+KKI ++ T+REI +L+ ++H N++ +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D+I K+ + +V+E +D DL +++ + L + FL QLL G+ Y H
Sbjct: 66 YDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTA 224
VLHRDLKP NLL+N +LKI DFGLAR T VVT WYRAP++L+ +Y+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
IDIWSVGCI E++ PLFPG QL I ++G+P+ S + +Y
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN--SKNWPNVTELPKYDPNF 238
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + +DLL KML DPN+RIT ++AL H Y +
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 155/287 (54%), Gaps = 10/287 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG+V A N+ E A+KKI ++ T+REI +L+ ++H N++ +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D+I K+ + +V+E +D DL +++ + L + FL QLL G+ Y H
Sbjct: 66 YDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTA 224
VLHRDLKP NLL+N +LKI DFGLAR T +VT WYRAP++L+ +Y+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
IDIWSVGCI E++ PLFPG QL I ++G+P+ S + +Y
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN--SKNWPNVTELPKYDPNF 238
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + +DLL KML DPN+RIT ++AL H Y +
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 10/290 (3%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG G YG V A N ET E VA+K++ D+ LREI LL+ ++H+N++ +
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D++ KK T +V+E D DL + S + L + + FL+QLL+GL + HS +
Sbjct: 67 HDVLHSDKKLT-----LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCTEYTA 224
VLHRDLKP NLL+N + +LK+ +FGLAR + VVT WYR P++L Y+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
+ID+WS GCI E+ PLFPG D QL+ I L+G+P + + +
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
P P ++ DLL+ +L +P +RI+ EEAL+HPY
Sbjct: 242 YP--ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 168/294 (57%), Gaps = 7/294 (2%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I IG G+YG+V N +T + VAIKK + D+ + + LREI++L+ ++H N++ +
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++ R ++ +++V+E D T LH++ R + + + + +Q L+ + + H +
Sbjct: 68 LEVFRRKRR-----LHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
+HRD+KP N+L+ +K+ DFG AR T +D+ + V TRWYR+PELL+ T+Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+W++GC+ E+++ PL+PGK V QL LI + +G ++ V+
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP 242
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND 338
+ +FPN S A+ LL+ L DP +R+T E+ L HPY +++ ++ D
Sbjct: 243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 17/303 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI-----GNAFDNIIDARRTLREIKLLRHMEHENVI 104
+G G + V A + T + VAIKKI A D I R LREIKLL+ + H N+I
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNII 75
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHS 163
+ D +++ +V++ M+TDL II+ + LT H + ++ L+GL+Y+H
Sbjct: 76 GLLDAF-----GHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 164 ASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCTEY 222
+LHRDLKP+NLLL+ + LK+ DFGLA++ S VVTRWYRAPELL Y
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+W+VGCIL E++ R P PG + QL I E +G+P + + S +
Sbjct: 191 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 250
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVC 342
P F +DL++ + +F+P RIT +AL+ Y +
Sbjct: 251 SFPGIPLHHI---FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQL 307
Query: 343 PRP 345
PRP
Sbjct: 308 PRP 310
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 157/292 (53%), Gaps = 14/292 (4%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G G YG V A+++ T E VAIK+I + +RE+ LL+ ++H N+I +
Sbjct: 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
K +I + +++++E + DL + + + ++ + FLYQL+ G+ + HS
Sbjct: 99 KSVIHHNHR-----LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 167 LHRDLKPSNLLLNASCD-----LKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCT 220
LHRDLKP NLLL+ S LKIGDFGLAR T ++T WYR PE+LL
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y+ ++DIWS+ CI E++ + PLFPG + QL I E++G PDD + + + +
Sbjct: 214 HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA--LPDW 271
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ P+ R + +DLL ML DP KRI+ + AL HPY
Sbjct: 272 KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 9/300 (3%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
NL+ S + + +G G+YG+V N +T VAIKK + D+ + + +REIKL
Sbjct: 18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL 77
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQ 153
L+ + HEN++ + ++ + K+ Y+V+E +D T L + L Q +L+Q
Sbjct: 78 LKQLRHENLVNLLEVCKKKKR-----WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRA 212
++ G+ + HS +++HRD+KP N+L++ S +K+ DFG ART + + + V TRWYRA
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFL 272
PELL+ +Y A+D+W++GC++ E+ EPLFPG + QL I +G+
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252
Query: 273 RSDNARRYVRQLPRCRKQQ-FATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ VR LP ++++ R+P S +DL +K L DP+KR E L H + Q
Sbjct: 253 NKNPVFAGVR-LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 17/296 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREE-VAIKKIGNAFDNIIDARRTLREIKLLRHME---HEN 102
+ IG GAYG V A + + VA+K++ T+RE+ +LRH+E H N
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS--DQQLTDDHCQYFLYQLLRGLKY 160
V+ + D+ + D + +V+E +D DL + + + + + ++QLLRGL +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS V+HRDLKP N+L+ +S +K+ DFGLAR S +T VVT WYRAPE+LL +
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ-S 194
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y +D+WSVGCI E+ R+PLF G V QL I ++IG P + D R
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE-------EDWPRDV 247
Query: 281 V--RQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
RQ + Q +F + DLL K L F+P KRI+ AL HPY Q L
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 158/297 (53%), Gaps = 17/297 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREE-VAIKKIGNAFDNIIDARRTLREIKLLRHME---HEN 102
+ IG GAYG V A + + VA+K++ T+RE+ +LRH+E H N
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS--DQQLTDDHCQYFLYQLLRGLKY 160
V+ + D+ + D + +V+E +D DL + + + + + ++QLLRGL +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS V+HRDLKP N+L+ +S +K+ DFGLAR S +T VVT WYRAPE+LL +
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ-S 194
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y +D+WSVGCI E+ R+PLF G V QL I ++IG P + D R
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE-------EDWPRDV 247
Query: 281 V--RQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLH 334
RQ + Q +F + DLL K L F+P KRI+ AL HPY Q L
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 175/327 (53%), Gaps = 23/327 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A E+ +EVAIKK+ + D R RE++++R ++H NV+ +K
Sbjct: 48 IGNGSFGVVFQAKLVES-DEVAIKKV------LQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 110 IRPPKKDTFNDVYI--VYELMDTDLHQIIRSDQQLTDDH----CQYFLYQLLRGLKYVHS 163
D ++V++ V E + +++ R +L + ++YQLLR L Y+HS
Sbjct: 101 FYS-NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 164 ASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
+ HRD+KP NLLL+ S LK+ DFG A+ + + +R+YRAPEL+ T Y
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNY 219
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
T IDIWS GC++ E+M +PLFPG+ + QL I +++G+P +++ N
Sbjct: 220 TTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ---IKTMNPNYMEH 276
Query: 283 QLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD----LN 337
+ P+ R F+ F P A+DL+ ++L + P+ R+T EAL HP+ L +
Sbjct: 277 KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMP 336
Query: 338 DEPVCPRPFHFDFEHSSCTEDHIRELI 364
+ P F++ E S D I L+
Sbjct: 337 NGRELPPLFNWTKEELSVRPDLISRLV 363
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 17/294 (5%)
Query: 47 IRPIGRGAYGIVCAAVNSETREE-VAIKKIGNAFDNIIDARRTLREIKLLRHME---HEN 102
+ IG GAYG V A + + VA+K++ T+RE+ +LRH+E H N
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS--DQQLTDDHCQYFLYQLLRGLKY 160
V+ + D+ + D + +V+E +D DL + + + + + ++QLLRGL +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS V+HRDLKP N+L+ +S +K+ DFGLAR S +T VVT WYRAPE+LL +
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ-S 194
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y +D+WSVGCI E+ R+PLF G V QL I ++IG P + D R
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE-------EDWPRDV 247
Query: 281 V--RQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
RQ + Q +F + DLL K L F+P KRI+ AL HPY Q
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 179/338 (52%), Gaps = 48/338 (14%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
E SSK + +G G++GIVC + E+ + A+KK+ + D R RE+ +++
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMK 55
Query: 97 HMEHENVIAIKDII--------RPP-----------KKDTFND--------------VYI 123
++H N+I + D +PP K + N+ + +
Sbjct: 56 VLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115
Query: 124 VYELMDTDLHQI----IRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLN 179
+ E + LH++ IRS + + + ++YQL R + ++HS + HRD+KP NLL+N
Sbjct: 116 IMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 180 ASCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEI 238
+ + LK+ DFG A+ ++ + +R+YRAPEL+L TEYT +ID+WS+GC+ GE+
Sbjct: 176 SKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 239 MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPN 298
+ +PLF G+ + QL I +++G+P + +R + VR P + + + P
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQM--IRMNPHYTEVR-FPTLKAKDWRKILPE 292
Query: 299 KS-SGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
+ S A+DLLE++L ++P+ RI EA+ HP+ L +
Sbjct: 293 GTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 157/311 (50%), Gaps = 23/311 (7%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKI---GNAFDNIIDARRTLR 90
G L +++ P+ IG GAYG V A + + VA+K + T+R
Sbjct: 1 GPLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR 60
Query: 91 EIKLLRHME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQLTDD 145
E+ LLR +E H NV+ + D+ + D V +V+E +D DL + L +
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 205
+ + Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S +T V
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 265
VT WYRAPE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG P
Sbjct: 181 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNKRIT 320
+ D+ R V LPR R P LL +ML F+P+KRI+
Sbjct: 240 E--------DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS 290
Query: 321 VEEALRHPYLQ 331
AL+H YL
Sbjct: 291 AFRALQHSYLH 301
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 25/305 (8%)
Query: 39 VSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIK--KIGNAFDNIIDARRTLREIKLLR 96
+S+Y P+ IG GAYG V A + + VA+K ++ N + + + T+RE+ LLR
Sbjct: 2 ATSRY-EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLR 58
Query: 97 HME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQLTDDHCQYFL 151
+E H NV+ + D+ + D V +V+E +D DL + L + + +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYR 211
Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S + VVT WYR
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYR 178
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
APE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG P +
Sbjct: 179 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE----- 232
Query: 272 LRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNKRITVEEALR 326
D+ R V LPR R P LL +ML F+P+KRI+ AL+
Sbjct: 233 ---DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 327 HPYLQ 331
H YL
Sbjct: 289 HSYLH 293
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 25/305 (8%)
Query: 39 VSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIK--KIGNAFDNIIDARRTLREIKLLR 96
+S+Y P+ IG GAYG V A + + VA+K ++ N + + + T+RE+ LLR
Sbjct: 2 ATSRY-EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLR 58
Query: 97 HME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQLTDDHCQYFL 151
+E H NV+ + D+ + D V +V+E +D DL + L + + +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYR 211
Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S + VVT WYR
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYR 178
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
APE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG P +
Sbjct: 179 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE----- 232
Query: 272 LRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNKRITVEEALR 326
D+ R V LPR R P LL +ML F+P+KRI+ AL+
Sbjct: 233 ---DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 327 HPYLQ 331
H YL
Sbjct: 289 HSYLH 293
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 25/305 (8%)
Query: 39 VSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIK--KIGNAFDNIIDARRTLREIKLLR 96
+S+Y P+ IG GAYG V A + + VA+K ++ N + + + T+RE+ LLR
Sbjct: 2 ATSRY-EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLR 58
Query: 97 HME---HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQLTDDHCQYFL 151
+E H NV+ + D+ + D V +V+E +D DL + L + + +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYR 211
Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S + VVT WYR
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYR 178
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
APE+LL T Y +D+WSVGCI E+ R+PLF G QL I +LIG P +
Sbjct: 179 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE----- 232
Query: 272 LRSDNARRYVRQLPRCRKQQFATR-----FPNKSSGAVDLLEKMLVFDPNKRITVEEALR 326
D+ R V LPR R P LL +ML F+P+KRI+ AL+
Sbjct: 233 ---DDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 327 HPYLQ 331
H YL
Sbjct: 289 HSYLH 293
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 26/300 (8%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
IG G++G+V A ++ E VAIKK+ G AF N RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLR 79
Query: 108 DIIRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLK 159
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L
Sbjct: 80 YFFYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 160 YVHSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
Y+HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
T+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPN 253
Query: 279 RYVRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 163/300 (54%), Gaps = 26/300 (8%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
IG G++G+V A ++ E VAIKK+ G AF N RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLR 79
Query: 108 DIIRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLK 159
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L
Sbjct: 80 YFFYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 160 YVHSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
Y+HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
T+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPN 253
Query: 279 RYVRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 254 YTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 161 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 277
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 334
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 335 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 392
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 95 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 211
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 268
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 269 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 326
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 120 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 236
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 293
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 294 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 351
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 118 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 234
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 291
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 292 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 349
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 82 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 255
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 116 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 289
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 110 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 226
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 283
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 284 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 341
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 87 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + Y+ +R+YRAPEL+ T
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 203
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 260
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 261 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 318
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 162/300 (54%), Gaps = 26/300 (8%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
IG G++G+V A ++ E VAIKK+ G AF N RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLR 79
Query: 108 DIIRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLK 159
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L
Sbjct: 80 YFFYSSGEKKD---EVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 160 YVHSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
Y+HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
T+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPN 253
Query: 279 RYVRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 254 YTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 15/304 (4%)
Query: 41 SKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEH 100
SKY + IG+G +G V A + +T ++VA+KK+ + LREIK+L+ ++H
Sbjct: 18 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 101 ENVIAIKDIIR---PPKKDTFNDVYIVYELMDTDLHQIIRSDQ-QLTDDHCQYFLYQLLR 156
ENV+ + +I R P +Y+V++ + DL ++ + + T + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYR 211
GL Y+H +LHRD+K +N+L+ LK+ DFGLAR S+ + VVT WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
PELLL +Y ID+W GCI+ E+ TR P+ G HQL LI++L GS +
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--W 254
Query: 272 LRSDNARRYVR-QLPRCRKQQFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
DN Y + +L + +K++ R + A+DL++K+LV DP +RI ++AL H
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 329 YLQS 332
+ S
Sbjct: 315 FFWS 318
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 15/304 (4%)
Query: 41 SKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEH 100
SKY + IG+G +G V A + +T ++VA+KK+ + LREIK+L+ ++H
Sbjct: 18 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 101 ENVIAIKDIIR---PPKKDTFNDVYIVYELMDTDLHQIIRSDQ-QLTDDHCQYFLYQLLR 156
ENV+ + +I R P +Y+V++ + DL ++ + + T + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYR 211
GL Y+H +LHRD+K +N+L+ LK+ DFGLAR S+ + VVT WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
PELLL +Y ID+W GCI+ E+ TR P+ G HQL LI++L GS +
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--W 254
Query: 272 LRSDNARRYVR-QLPRCRKQQFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
DN Y + +L + +K++ R + A+DL++K+LV DP +RI ++AL H
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 329 YLQS 332
+ S
Sbjct: 315 FFWS 318
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 15/304 (4%)
Query: 41 SKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEH 100
SKY + IG+G +G V A + +T ++VA+KK+ + LREIK+L+ ++H
Sbjct: 17 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 101 ENVIAIKDIIR---PPKKDTFNDVYIVYELMDTDLHQIIRSDQ-QLTDDHCQYFLYQLLR 156
ENV+ + +I R P +Y+V++ + DL ++ + + T + + LL
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWYR 211
GL Y+H +LHRD+K +N+L+ LK+ DFGLAR S+ + VVT WYR
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 212 APELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
PELLL +Y ID+W GCI+ E+ TR P+ G HQL LI++L GS +
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV--W 253
Query: 272 LRSDNARRYVR-QLPRCRKQQFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
DN Y + +L + +K++ R + A+DL++K+LV DP +RI ++AL H
Sbjct: 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313
Query: 329 YLQS 332
+ S
Sbjct: 314 FFWS 317
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 17/305 (5%)
Query: 41 SKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEH 100
SKY + IG+G +G V A + +T ++VA+KK+ + LREIK+L+ ++H
Sbjct: 18 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 101 ENVIAIKDIIRPPKKDTFN----DVYIVYELMDTDLHQIIRSDQ-QLTDDHCQYFLYQLL 155
ENV+ + +I R K +N +Y+V++ + DL ++ + + T + + LL
Sbjct: 77 ENVVNLIEICRT-KASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 156 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART-----TSETDFMTEYVVTRWY 210
GL Y+H +LHRD+K +N+L+ LK+ DFGLAR S+ + VVT WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 211 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLG 270
R PELLL +Y ID+W GCI+ E+ TR P+ G HQL LI++L GS
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV-- 253
Query: 271 FLRSDNARRYVR-QLPRCRKQQFATRFPN--KSSGAVDLLEKMLVFDPNKRITVEEALRH 327
+ DN Y + +L + +K++ R + A+DL++K+LV DP +RI ++AL H
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 328 PYLQS 332
+ S
Sbjct: 314 DFFWS 318
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 86 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 202
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 259
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 260 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 317
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 94 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 267
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 268 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 83 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 199
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 256
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 257 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 314
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 101 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 217
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 218 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 274
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 275 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 332
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 82 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 255
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 82 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 255
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 90 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 206
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 263
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 264 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 321
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 116 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 232
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 289
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 160/296 (54%), Gaps = 18/296 (6%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 110 IRPP--KKDTFNDVYIVYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYVHS 163
KKD + +V + + ++++ R + Q L + + ++YQL R L Y+HS
Sbjct: 82 FYSSGEKKDVVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 164 ASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
+ HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T+Y
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
T++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 257
Query: 283 QLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 258 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G+V A ++ E VAIKK+ + D R RE++++R ++H N++ ++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 110 IRPP--KKDTFNDVYI--VYELMDTDLHQIIR----SDQQLTDDHCQYFLYQLLRGLKYV 161
KKD +VY+ V + + ++++ R + Q L + + ++YQL R L Y+
Sbjct: 94 FYSSGEKKD---EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 162 HSASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
HS + HRD+KP NLLL+ + LK+ DFG A+ + + +R+YRAPEL+ T
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+YT++ID+WS GC+L E++ +P+FPG V QL I +++G+P +R N
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 267
Query: 281 VRQLPRCRKQQFATRF-PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ P+ + + F P A+ L ++L + P R+T EA H + L D N
Sbjct: 268 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 155/304 (50%), Gaps = 25/304 (8%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM---EHENVI 104
R G+G +G V T VAIKK+ I D R RE+++++ + H N++
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKV------IQDPRFRNRELQIMQDLAVLHHPNIV 82
Query: 105 AIKDIIRPPKKDTFNDVY--IVYELMDTDLHQIIRS--DQQLTDDHC--QYFLYQLLRGL 158
++ + D+Y +V E + LH+ R+ +Q+ + FL+QL+R +
Sbjct: 83 QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142
Query: 159 KYVH--SASVLHRDLKPSNLLLN-ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPEL 215
+H S +V HRD+KP N+L+N A LK+ DFG A+ S ++ Y+ +R+YRAPEL
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPEL 202
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ YT A+DIWSVGCI E+M EP+F G + QL I ++G P S LR
Sbjct: 203 IFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP---SREVLRKL 259
Query: 276 NARRYVRQLPRCRKQQFATRFPNKS----SGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
N L + ++ F + S A DLL +L + P +R+ EAL HPY
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 332 SLHD 335
LHD
Sbjct: 320 ELHD 323
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 156/303 (51%), Gaps = 33/303 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEH-ENVIA 105
+R +GRG Y V A+N E+V +K + N I REIK+L ++ N+I
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK-----REIKILENLRGGPNIIT 96
Query: 106 IKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 97 LADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 165 SVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 223
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 224 AAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLG 270
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 270
Query: 271 FLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 271 DILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 331 QSL 333
++
Sbjct: 325 YTV 327
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 157/316 (49%), Gaps = 42/316 (13%)
Query: 50 IGRGAYGIV--CAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
+GRG YG V + + ++ A+K+I ++ REI LLR ++H NVI+++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM----SACREIALLRELKHPNVISLQ 84
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ---------QLTDDHCQYFLYQLLRGL 158
+ V+++++ + DL II+ + QL + LYQ+L G+
Sbjct: 85 KVFL---SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 159 KYVHSASVLHRDLKPSNLLLNASCD----LKIGDFGLARTTSET----DFMTEYVVTRWY 210
Y+H+ VLHRDLKP+N+L+ +KI D G AR + + VVT WY
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 211 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF--------PGKDYVH-QLRLITELI 261
RAPELLL YT AIDIW++GCI E++T EP+F Y H QL I ++
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261
Query: 262 GSPDDASLGFLR-----SDNARRYVRQ-LPRCRKQQFATRFPNK-SSGAVDLLEKMLVFD 314
G P D ++ S + + R C ++ + K S A LL+K+L D
Sbjct: 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMD 321
Query: 315 PNKRITVEEALRHPYL 330
P KRIT E+A++ PY
Sbjct: 322 PIKRITSEQAMQDPYF 337
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAIK I I AR EI++L+ + H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 82 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 240
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 241 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAIK I I AR EI++L+ + H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 75 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 233
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 234 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAIK I I AR EI++L+ + H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 76 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 234
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 235 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAIK I I AR EI++L+ + H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 76 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 234
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 235 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAIK I I AR EI++L+ + H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 76 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 234
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 235 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAI+ I I AR EI++L+ + H
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 201 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 314
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 359
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 360 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 44/296 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT------LREIKLLRHMEHE 101
+ +G GA G V A +T ++VAI+ I I AR EI++L+ + H
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+I IK+ D YIV ELM+ +L + +++L + C+ + YQ+L ++Y
Sbjct: 215 CIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 161 VHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LL++ C +KI DFG ++ ET M T Y APE+L+
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 328
Query: 218 NC--TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ Y A+D WS+G IL ++ P P ++ Q+ L ++ +
Sbjct: 329 SVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSLKDQI-------------TS 373
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
++ ++ + S A+DL++K+LV DP R T EEALRHP+LQ
Sbjct: 374 GKYNFIPEV-----------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+G++G V + T++E A+K I A D LRE++LL+ ++H N++ + +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 110 IRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+ + YIV EL +L I ++ ++ + Q+ G+ Y+H +++H
Sbjct: 90 LEDS-----SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 169 RDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
RDLKP N+LL + CD+KI DFGL+ + M + + T +Y APE+L Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEK 202
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
D+WS G IL +++ P F GK+ L+ +Y LP
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKN------------------EYDILKRVETGKYAFDLP 244
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ R S A DL+ KML F P+ RIT + L HP++Q
Sbjct: 245 QWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+G++G V + T++E A+K I A D LRE++LL+ ++H N++ + +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 110 IRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+ + YIV EL +L I ++ ++ + Q+ G+ Y+H +++H
Sbjct: 90 LEDS-----SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 169 RDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
RDLKP N+LL + CD+KI DFGL+ + M + + T +Y APE+L Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEK 202
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
D+WS G IL +++ P F GK+ L+ +Y LP
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKN------------------EYDILKRVETGKYAFDLP 244
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ R S A DL+ KML F P+ RIT + L HP++Q
Sbjct: 245 QWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+G++G V + T++E A+K I A D LRE++LL+ ++H N++ + +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 110 IRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+ + YIV EL +L I ++ ++ + Q+ G+ Y+H +++H
Sbjct: 90 LEDS-----SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 169 RDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
RDLKP N+LL + CD+KI DFGL+ + M + + T +Y APE+L Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEK 202
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
D+WS G IL +++ P F GK+ L+ + +Y LP
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------ETGKYAFDLP 244
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ R S A DL+ KML F P+ RIT + L HP++Q
Sbjct: 245 QWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 155/302 (51%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+VA+K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVAVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N+L++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 161/318 (50%), Gaps = 39/318 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G++G V A + + + VA+K + N R+ EI++L H+ ++
Sbjct: 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF---HRQAAEEIRILEHLRKQDKDNT 158
Query: 107 KDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHS 163
++I + TF N + + +EL+ +L+++I+ + Q + + F + +L+ L +H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 164 ASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
++H DLKP N+LL +K+ DFG + E + + +R+YRAPE++L
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILG-AR 275
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD----DAS---LGFLRS 274
Y ID+WS+GCIL E++T PL PG+D QL + EL+G P DAS F+
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSX 335
Query: 275 DNARRY-----------VRQLPRCRKQQF-----ATRFPNKSSGA-----VDLLEKMLVF 313
RY V R R+ + + + N G +D L++ L +
Sbjct: 336 KGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW 395
Query: 314 DPNKRITVEEALRHPYLQ 331
DP R+T +ALRHP+L+
Sbjct: 396 DPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 161/318 (50%), Gaps = 39/318 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G++G V A + + + VA+K + N R+ EI++L H+ ++
Sbjct: 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF---HRQAAEEIRILEHLRKQDKDNT 158
Query: 107 KDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHS 163
++I + TF N + + +EL+ +L+++I+ + Q + + F + +L+ L +H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 164 ASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
++H DLKP N+LL +K+ DFG + E + + +R+YRAPE++L
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILG-AR 275
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD----DAS---LGFLRS 274
Y ID+WS+GCIL E++T PL PG+D QL + EL+G P DAS F+
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSX 335
Query: 275 DNARRY-----------VRQLPRCRKQQF-----ATRFPNKSSGA-----VDLLEKMLVF 313
RY V R R+ + + + N G +D L++ L +
Sbjct: 336 KGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW 395
Query: 314 DPNKRITVEEALRHPYLQ 331
DP R+T +ALRHP+L+
Sbjct: 396 DPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G +G V A + + + VA+K + N R+ EI++L H+ ++
Sbjct: 102 LKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRF---HRQAAEEIRILEHLRKQDKDNT 158
Query: 107 KDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHS 163
++I + TF N + + +EL+ +L+++I+ + Q + + F + +L+ L +H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 164 ASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
++H DLKP N+LL +K+ DFG + E + + +R+YRAPE++L
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQSRFYRAPEVILG-AR 275
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD----DAS---LGFLRS 274
Y ID+WS+GCIL E++T PL PG+D QL + EL+G P DAS F+
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSX 335
Query: 275 DNARRY-----------VRQLPRCRKQQF-----ATRFPNKSSGA-----VDLLEKMLVF 313
RY V R R+ + + + N G +D L++ L +
Sbjct: 336 KGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW 395
Query: 314 DPNKRITVEEALRHPYLQ 331
DP R+T +ALRHP+L+
Sbjct: 396 DPAVRMTPGQALRHPWLR 413
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 158/296 (53%), Gaps = 25/296 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E V +K + +R ++ ++ LR N+I +
Sbjct: 43 VRKLGRGKYSEVFEAINITNNERVVVKILKPV--KKKKIKREVKILENLR--GGTNIIKL 98
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D ++ P T +V+E ++ TD Q+ Q LTD ++++Y+LL+ L Y HS
Sbjct: 99 IDTVKDPVSKT---PALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDYCHSKG 152
Query: 166 VLHRDLKPSNLLLN-ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 153 IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDY 212
Query: 225 AIDIWSVGCILGE-IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS------DNA 277
++D+WS+GC+L I REP F G+D QL I +++G+ + G+L+ +
Sbjct: 213 SLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHF 270
Query: 278 RRYVRQLPRCRKQQFATRFPNK---SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ Q R R + F N+ S A+DLL+K+L +D +R+T +EA+ HPY
Sbjct: 271 NDILGQHSRKRWENF-IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 158/296 (53%), Gaps = 25/296 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E V +K + +R ++ ++ LR N+I +
Sbjct: 48 VRKLGRGKYSEVFEAINITNNERVVVKILKPV--KKKKIKREVKILENLR--GGTNIIKL 103
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
D ++ P T +V+E ++ TD Q+ Q LTD ++++Y+LL+ L Y HS
Sbjct: 104 IDTVKDPVSKT---PALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDYCHSKG 157
Query: 166 VLHRDLKPSNLLLN-ASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 158 IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDY 217
Query: 225 AIDIWSVGCILGE-IMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS------DNA 277
++D+WS+GC+L I REP F G+D QL I +++G+ + G+L+ +
Sbjct: 218 SLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHF 275
Query: 278 RRYVRQLPRCRKQQFATRFPNK---SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ Q R R + F N+ S A+DLL+K+L +D +R+T +EA+ HPY
Sbjct: 276 NDILGQHSRKRWENF-IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 40 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 95
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 96 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 149
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 150 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 209
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 210 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 269
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 270 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323
Query: 332 SL 333
++
Sbjct: 324 TV 325
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 96
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 97 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 150
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 210
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 211 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 270
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 271 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
Query: 332 SL 333
++
Sbjct: 325 TV 326
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 96
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 97 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 150
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 210
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 211 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 270
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 271 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324
Query: 332 SL 333
++
Sbjct: 325 TV 326
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 47 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 102
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 103 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 156
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 157 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 216
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 217 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 276
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 277 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 330
Query: 332 SL 333
++
Sbjct: 331 TV 332
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 31/299 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 31/302 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V A+N E+V +K + +R ++ ++ LR N+I +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR--GGPNIITL 97
Query: 107 KDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
DI++ P T +V+E + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 98 ADIVKDPVSRT---PALVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 166 VLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
++HRD+KP N++++ L++ D+GLA V +R+++ PELL++ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 225 AIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD------------DASLGF 271
++D+WS+GC+L ++ R EP F G D QL I +++G+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ ++R+ + Q S A+D L+K+L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHLV------SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 332 SL 333
++
Sbjct: 326 TV 327
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L M N++ +
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLMGGPNIVKL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 267 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 333 L 333
+
Sbjct: 321 V 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLXGGPNIVKL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 267 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 333 L 333
+
Sbjct: 321 V 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLXGGPNIVKL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 267 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 333 L 333
+
Sbjct: 321 V 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLXGGPNIVKL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 267 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 333 L 333
+
Sbjct: 321 V 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 37 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLXGGPNIVKL 92
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 93 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 147
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 148 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 207
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 208 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 267
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 268 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
Query: 333 L 333
+
Sbjct: 322 V 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 57 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLXGGPNIVKL 112
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 113 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 167
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 168 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 227
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 228 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEAL 287
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 288 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
Query: 333 L 333
+
Sbjct: 342 V 342
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLCGGPNIVKL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 267 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 333 L 333
+
Sbjct: 321 V 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 37 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLCGGPNIVKL 92
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 93 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 147
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 148 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 207
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 208 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 267
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 268 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
Query: 333 L 333
+
Sbjct: 322 V 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 38 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLCGGPNIVKL 93
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 94 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 148
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 149 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 208
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 209 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 268
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 269 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
Query: 333 L 333
+
Sbjct: 323 V 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 29/301 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+R +GRG Y V +N E+ IK + + L N++ +
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLCGGPNIVKL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI+R T + +++E ++ +++ LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIVRDQHSKTPS---LIFEYVNNTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 167 LHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+KP N++++ L++ D+GLA V +R+++ PELL++ +Y +
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 226 IDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELIGSPD------------DASLGFL 272
+D+WS+GC+ G I +EP F G D QL I +++G+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
++R+ + Q S A+D L+K+L +D +R+T EA+ HPY Q
Sbjct: 267 VGRHSRKPWLKFMNADNQHLV------SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 333 L 333
+
Sbjct: 321 V 321
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 139/297 (46%), Gaps = 38/297 (12%)
Query: 41 SKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEH 100
S+ ++ +G GAYG V + T E AIK I + + L E+ +L+ ++H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 101 ENVIAIKDIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
N++ + D + + Y EL D +H++ + + + Q+L G+
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSGVT 150
Query: 160 YVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+H +++HRDLKP NLLL + +KI DFGL+ M E + T +Y APE+L
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
+Y D+WS+G IL ++ P F G+ LR + +
Sbjct: 211 RK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK----------------- 251
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
+Y P + N S GA DL+++ML FD +RI+ ++AL HP+++ +
Sbjct: 252 -GKYTFDSPE---------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 42/297 (14%)
Query: 39 VSSKYVPP--IR-PIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKL 94
+S +++ P IR +G G++G V A + +T+++VA+K I D R REI
Sbjct: 3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQL 154
L+ + H ++I + D+I P D+ +V E +L I +++T+D + F Q+
Sbjct: 63 LKLLRHPHIIKLYDVITTP-----TDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPE 214
+ ++Y H ++HRDLKP NLLL+ + ++KI DFGL+ ++ +F+ + Y APE
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 215 LLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRS 274
++ +D+WS G +L ++ V +L E I + +
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVML-----------VGRLPFDDEFIPN-------LFKK 219
Query: 275 DNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
N+ YV P+ S GA L+ +M+V DP +RIT++E R P+
Sbjct: 220 VNSCVYV--------------MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 43/292 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAI 106
R +G+G++G V + T +E A+K I D LRE++LL+ ++H N++ +
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 107 KDIIRPPKKDTF---NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
+ K F +VY EL D I S ++ ++ + Q+L G+ Y+H
Sbjct: 98 YEFFED--KGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHK 150
Query: 164 ASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
++HRDLKP NLLL + +++I DFGL+ + M + + T +Y APE+L
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 209
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y D+WS G IL +++ P F G + L+ +Y
Sbjct: 210 -YDEKCDVWSTGVILYILLSGCPPFNGAN------------------EYDILKKVEKGKY 250
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+LP+ +K S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 251 TFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 43/292 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAI 106
R +G+G++G V + T +E A+K I D LRE++LL+ ++H N++ +
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 107 KDIIRPPKKDTF---NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
+ K F +VY EL D I S ++ ++ + Q+L G+ Y+H
Sbjct: 116 YEFFED--KGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 164 ASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
++HRDLKP NLLL + +++I DFGL+ + M + + T +Y APE+L
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 227
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y D+WS G IL +++ P F G + L+ + + +Y
Sbjct: 228 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------------GKY 268
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+LP+ +K S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 269 TFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 43/292 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAI 106
R +G+G++G V + T +E A+K I D LRE++LL+ ++H N++ +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 107 KDIIRPPKKDTF---NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
+ K F +VY EL D I S ++ ++ + Q+L G+ Y+H
Sbjct: 92 YEFFED--KGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 164 ASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
++HRDLKP NLLL + +++I DFGL+ + M + + T +Y APE+L
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 203
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y D+WS G IL +++ P F G + L+ + + +Y
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------------GKY 244
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+LP+ +K S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 245 TFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 43/292 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAI 106
R +G+G++G V + T +E A+K I D LRE++LL+ ++H N++ +
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 107 KDIIRPPKKDTF---NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
+ K F +VY EL D I S ++ ++ + Q+L G+ Y+H
Sbjct: 115 YEFFED--KGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 164 ASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
++HRDLKP NLLL + +++I DFGL+ + M + + T +Y APE+L
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT- 226
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y D+WS G IL +++ P F G + L+ + + +Y
Sbjct: 227 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------------GKY 267
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+LP+ +K S A DL+ KML + P+ RI+ +AL H ++Q+
Sbjct: 268 TFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIA 105
++ +G G++G V A ++ T ++VA+K I D + R REI LR + H ++I
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D+I+ + +++ +V E +L I ++++ + F Q++ ++Y H
Sbjct: 73 LYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKP NLLL+ ++KI DFGL+ ++ +F+ + Y APE++
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS G IL ++ R F DD S+ L N V LP
Sbjct: 188 VDVWSCGVILYVMLCRRLPF-------------------DDESIPVLFK-NISNGVYTLP 227
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 228 KFL-----------SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIA 105
++ +G G++G V A ++ T ++VA+K I D + R REI LR + H ++I
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D+I+ + +++ +V E +L I ++++ + F Q++ ++Y H
Sbjct: 69 LYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKP NLLL+ ++KI DFGL+ ++ +F+ + Y APE++
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS G IL ++ R F DD S+ L N V LP
Sbjct: 184 VDVWSCGVILYVMLCRRLPF-------------------DDESIPVLFK-NISNGVYTLP 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 224 KFL-----------SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIA 105
++ +G G++G V A ++ T ++VA+K I D + R REI LR + H ++I
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D+I+ + +++ +V E +L I ++++ + F Q++ ++Y H
Sbjct: 78 LYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKP NLLL+ ++KI DFGL+ ++ +F+ + Y APE++
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS G IL ++ R F DD S+ L N V LP
Sbjct: 193 VDVWSCGVILYVMLCRRLPF-------------------DDESIPVLFK-NISNGVYTLP 232
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 233 KFL-----------SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR-RTLREIKLLRHMEHENVIA 105
++ +G G++G V A ++ T ++VA+K I D + R REI LR + H ++I
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D+I+ + +++ +V E +L I ++++ + F Q++ ++Y H
Sbjct: 79 LYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLKP NLLL+ ++KI DFGL+ ++ +F+ + Y APE++
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS G IL ++ R F DD S+ L N V LP
Sbjct: 194 VDVWSCGVILYVMLCRRLPF-------------------DDESIPVLFK-NISNGVYTLP 233
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ S GA L+++ML+ +P RI++ E ++ + +
Sbjct: 234 KFL-----------SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 54/330 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN--AFDNIIDARRTLREIKLLRHMEHENVIAIK 107
IG+G++G V A + +E VAIK I N AF N + E++LL M +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTEMKY 116
Query: 108 DIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHSA 164
I+ + F N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++ +
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 165 --SVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
S++H DLKP N+LL +KI DFG + + + + + +R+YR+PE+LL
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY--QXIQSRFYRSPEVLLGMP 234
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y AID+WS+GCIL E+ T EPLF G + V Q+ I E++G P L ++ AR++
Sbjct: 235 -YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKARKF 291
Query: 281 VRQLP---------RCRKQQF-------------------ATRFPNKSSGAV-------D 305
+LP + K+++ R +S V D
Sbjct: 292 FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKD 351
Query: 306 LLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
L+ +ML +DP RI AL+H + + D
Sbjct: 352 LILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 163/333 (48%), Gaps = 60/333 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN--AFDNIIDARRTLREIKLLRHMEHENVIAIK 107
IG+G++G V A + +E VAIK I N AF N + E++LL M +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTEMKY 116
Query: 108 DIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHSA 164
I+ + F N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++ +
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 165 --SVLHRDLKPSNLLLNASCD-----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
S++H DLKP N+LL C+ +KI DFG + + + + + +R+YR+PE+LL
Sbjct: 177 ELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIY--QXIQSRFYRSPEVLL 231
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNA 277
Y AID+WS+GCIL E+ T EPLF G + V Q+ I E++G P L ++ A
Sbjct: 232 GMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKA 288
Query: 278 RRYVRQLP---------RCRKQQF-------------------ATRFPNKSSGAV----- 304
R++ +LP + K+++ R +S V
Sbjct: 289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLK 348
Query: 305 --DLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
DL+ +ML +DP RI AL+H + + D
Sbjct: 349 FKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 148/327 (45%), Gaps = 50/327 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETR-EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+ +G GA+G V ++ + VA+K + N D +A R+ EI++L H+ N
Sbjct: 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS--EIQVLEHL---NTTD 72
Query: 106 IKDIIRPPKK----DTFNDVYIVYELMDTDLHQIIRSDQQLTD--DHCQYFLYQLLRGLK 159
R + + + IV+EL+ + I+ + L DH + YQ+ + +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 160 YVHSASVLHRDLKPSNLLLNAS-------------------CDLKIGDFGLARTTSETDF 200
++HS + H DLKP N+L S D+K+ DFG A T + +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEH 190
Query: 201 MTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL 260
+ V TR YRAPE++L ++ D+WS+GCIL E +FP D L ++ +
Sbjct: 191 HSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 261 IGSPDDASLGFLRS--------------DNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 306
+G + R +A RYV + + K+ F + DL
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE-FMLSQDVEHERLFDL 308
Query: 307 LEKMLVFDPNKRITVEEALRHPYLQSL 333
++KML +DP KRIT+ EAL+HP+ L
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 54/330 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN--AFDNIIDARRTLREIKLLRHMEHENVIAIK 107
IG+G++G V A + +E VAIK I N AF N + E++LL M +
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTEMKY 97
Query: 108 DIIRPPKKDTF-NDVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHSA 164
I+ + F N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++ +
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 157
Query: 165 --SVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
S++H DLKP N+LL +KI DFG + + + + + +R+YR+PE+LL
Sbjct: 158 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY--QXIQSRFYRSPEVLLGMP 215
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y AID+WS+GCIL E+ T EPLF G + V Q+ I E++G P L ++ AR++
Sbjct: 216 -YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKARKF 272
Query: 281 VRQLP---------RCRKQQF-------------------ATRFPNKSSGAV-------D 305
+LP + K+++ R +S V D
Sbjct: 273 FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKD 332
Query: 306 LLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
L+ +ML +DP RI AL+H + + D
Sbjct: 333 LILRMLDYDPKTRIQPYYALQHSFFKKTAD 362
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 43/292 (14%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGN-AFDNIIDARRTLREIKLLRHMEHENVIAI 106
R +G+G++G V + T +E A+K I D LRE++LL+ ++H N+ +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 107 KDIIRPPKKDTF---NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
+ K F +VY EL D I S ++ ++ + Q+L G+ Y H
Sbjct: 92 YEFFED--KGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 164 ASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
++HRDLKP NLLL + +++I DFGL+ + + + T +Y APE+L
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT- 203
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y D+WS G IL +++ P F G + L+ + + +Y
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------------GKY 244
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+LP+ +K S A DL+ K L + P+ RI+ +AL H ++Q+
Sbjct: 245 TFELPQWKKV---------SESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 42/294 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
+G GA+ V A T + A+K I + + + EI +LR ++HEN++A++
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPK---KALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 108 DIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI P N +Y+V +L+ +L I T+ + Q+L + Y+H +
Sbjct: 87 DIYESP-----NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 167 LHRDLKPSNLLL---NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 223
+HRDLKP NLL + + I DFGL++ + D M+ T Y APE+L Y+
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ-KPYS 200
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+D WS+G I ++ P F +N + Q
Sbjct: 201 KAVDCWSIGVIAYILLCGYPPF---------------------------YDENDSKLFEQ 233
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
+ + + + + + S A D + ++ DPNKR T E+A RHP++ LN
Sbjct: 234 ILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALN 287
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 147/327 (44%), Gaps = 50/327 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETR-EEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+ +G GA+G V ++ + VA+K + N D +A R+ EI++L H+ N
Sbjct: 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS--EIQVLEHL---NTTD 72
Query: 106 IKDIIRPPKK----DTFNDVYIVYELMDTDLHQIIRSDQQLTD--DHCQYFLYQLLRGLK 159
R + + + IV+EL+ + I+ + L DH + YQ+ + +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 160 YVHSASVLHRDLKPSNLLLNAS-------------------CDLKIGDFGLARTTSETDF 200
++HS + H DLKP N+L S D+K+ DFG A T + +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEH 190
Query: 201 MTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL 260
+ V R YRAPE++L ++ D+WS+GCIL E +FP D L ++ +
Sbjct: 191 HSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 261 IGSPDDASLGFLRS--------------DNARRYVRQLPRCRKQQFATRFPNKSSGAVDL 306
+G + R +A RYV + + K+ F + DL
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE-FMLSQDVEHERLFDL 308
Query: 307 LEKMLVFDPNKRITVEEALRHPYLQSL 333
++KML +DP KRIT+ EAL+HP+ L
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 144/285 (50%), Gaps = 37/285 (12%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V+ T E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I+ +++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++H
Sbjct: 74 IQ---EESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 169 RDLKPSNLLLNASCD---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
R+LKP NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKP 187
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIW+ G IL ++ P F +D Q RL ++ A Y P
Sbjct: 188 VDIWACGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP 229
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 230 -----EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 144/285 (50%), Gaps = 37/285 (12%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V+ T E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++H
Sbjct: 74 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 169 RDLKPSNLLLNASCD---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
R+LKP NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKP 187
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIW+ G IL ++ P F +D Q RL ++ A Y P
Sbjct: 188 VDIWACGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP 229
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 230 -----EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 144/285 (50%), Gaps = 37/285 (12%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V+ T E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++H
Sbjct: 73 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 127
Query: 169 RDLKPSNLLLNASCD---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
R+LKP NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKP 186
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIW+ G IL ++ P F +D Q RL ++ A Y P
Sbjct: 187 VDIWACGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP 228
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 229 -----EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIA 105
++ +G GAYG V + T E AIK I ++ ++ L E+ +L+ ++H N++
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 106 IKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ + + + Y+V E+ +L I Q+ ++ + Q+L G Y+H
Sbjct: 86 LYEFFEDKR-----NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 165 SVLHRDLKPSNLLLNASCD---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
+++HRDLKP NLLL + +KI DFGL+ M E + T +Y APE+L +
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK--K 198
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y D+WS G IL ++ P F G+ D +
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQ----------------TDQEI------------ 230
Query: 282 RQLPRCRKQQFATRFPN---KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
L R K +F+ P+ S A L++ ML ++P+KRI+ EEAL HP++
Sbjct: 231 --LKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 49/305 (16%)
Query: 31 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR 90
+ + FEV S+ +GRGA IV T++ A+K +D +
Sbjct: 49 DALSDFFEVESE-------LGRGATSIVYRCKQKGTQKPYALK----VLKKTVDKKIVRT 97
Query: 91 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQY 149
EI +L + H N+I +K+I P ++ +V EL+ +L I ++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETP-----TEISLVLELVTGGELFDRIVEKGYYSERDAAD 152
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVV 206
+ Q+L + Y+H ++HRDLKP NLL LKI DFGL++ M
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG 212
Query: 207 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPD 265
T Y APE+L C Y +D+WSVG I ++ EP + D
Sbjct: 213 TPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFY-------------------D 252
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEAL 325
+ F+ R++ C + + S A DL+ K++V DP KR+T +AL
Sbjct: 253 ERGDQFM--------FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304
Query: 326 RHPYL 330
+HP++
Sbjct: 305 QHPWV 309
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 144/285 (50%), Gaps = 37/285 (12%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V+ T E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++++F+ Y+V++L+ +L + I + + ++ + + Q+L + Y HS ++H
Sbjct: 97 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 151
Query: 169 RDLKPSNLLLNASCD---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
R+LKP NLLL + +K+ DFGLA ++++ + T Y +PE+L Y+
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-DPYSKP 210
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+DIW+ G IL ++ P F +D Q RL ++ A Y P
Sbjct: 211 VDIWACGVILYILLVGYPPFWDED---QHRLYAQI---------------KAGAYDYPSP 252
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++ T P S L++ ML +P KRIT ++AL+ P++
Sbjct: 253 -----EWDTVTPEAKS----LIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 45/314 (14%)
Query: 42 KYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHME 99
+Y+ IG G+ GIVC A T ++VA+KK+ D RR L E+ ++R
Sbjct: 45 EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM----DLRKQQRRELLFNEVVIMRDYH 100
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
H+NV+ + +++++V E ++ I + ++ ++ +LR L
Sbjct: 101 HDNVVDMYS-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALS 155
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLN 218
Y+H+ V+HRD+K ++LL + +K+ DFG A+ + E V T ++ APE +++
Sbjct: 156 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE-VIS 214
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
Y +DIWS+G ++ E++ EP + + + +R I + +
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLP---------------- 258
Query: 279 RYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND 338
PR + SS L+ MLV +P++R T +E L HP+L+ L
Sbjct: 259 ------PRVKD------LHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLK----LAG 302
Query: 339 EPVCPRPFHFDFEH 352
P C P + H
Sbjct: 303 PPSCIVPLMRQYRH 316
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 45/292 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIA 105
++ +G GAYG V + T E AIK I ++ ++ L E+ +L+ ++H N++
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 106 IKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ + + + Y+V E+ +L I Q+ ++ + Q+L G Y+H
Sbjct: 69 LYEFFEDKR-----NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 165 SVLHRDLKPSNLLLNASCD---LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
+++HRDLKP NLLL + +KI DFGL+ M E + T +Y APE+L +
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK--K 181
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y D+WS G IL ++ P F G+ D +
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQ----------------TDQEI------------ 213
Query: 282 RQLPRCRKQQFATRFPN---KSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
L R K +F+ P+ S A L++ ML ++P+KRI+ EEAL HP++
Sbjct: 214 --LKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 52/303 (17%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKI----GNAF--DNIIDARR-TLREIKLLRHM 98
P +GRG +V ++ T +E A+K I G +F + + + R TL+E+ +LR +
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 99 E-HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLR 156
H N+I +KD + +TF ++V++LM +L + L++ + + LL
Sbjct: 81 SGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
+ +H +++HRDLKP N+LL+ ++K+ DFG + + + E T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
Query: 217 L-----NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE---LIGSPDDAS 268
N Y +D+WS G I+ ++ P F + + LR+I GSP+
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE--- 252
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
+ + S DL+ + LV P KR T EEAL HP
Sbjct: 253 ---------------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285
Query: 329 YLQ 331
+ Q
Sbjct: 286 FFQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 52/303 (17%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKI----GNAF--DNIIDARR-TLREIKLLRHM 98
P +GRG +V ++ T +E A+K I G +F + + + R TL+E+ +LR +
Sbjct: 8 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 67
Query: 99 E-HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLR 156
H N+I +KD + +TF ++V++LM +L + L++ + + LL
Sbjct: 68 SGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 122
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
+ +H +++HRDLKP N+LL+ ++K+ DFG + + + E T Y APE++
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
Query: 217 L-----NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE---LIGSPDDAS 268
N Y +D+WS G I+ ++ P F + + LR+I GSP+
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE--- 239
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
+ + S DL+ + LV P KR T EEAL HP
Sbjct: 240 ---------------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 272
Query: 329 YLQ 331
+ Q
Sbjct: 273 FFQ 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 151/326 (46%), Gaps = 49/326 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V +E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++ F+ Y+V++L+ +L + I + + ++ + ++Q+L + ++H ++H
Sbjct: 99 I---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVH 153
Query: 169 RDLKPSNLLLNASCD---LKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
RDLKP NLLL + C +K+ DFGLA E + T Y +PE+L Y
Sbjct: 154 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK-DPYGK 212
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+DIW+ G IL ++ P F +D Q +L ++ D
Sbjct: 213 PVDIWACGVILYILLVGYPPFWDED---QHKLYQQIKAGAYD-----------------F 252
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPR 344
P ++ T P A +L+ +ML +P KRIT ++AL+HP+ VC R
Sbjct: 253 P---SPEWDTVTPE----AKNLINQMLTINPAKRITADQALKHPW-----------VCQR 294
Query: 345 PFHFDFEHSSCTEDHIRELIWRESVK 370
H T + +R+ R +K
Sbjct: 295 STVASMMHRQETVECLRKFNARRKLK 320
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAI 106
+P+G G++ I V+ ++ + A+K I + T +EI L+ E H N++ +
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKL 71
Query: 107 KDIIRPPKKDTFND---VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
++ F+D ++V EL++ +L + I+ + ++ Y + +L+ + ++H
Sbjct: 72 HEV--------FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 163 SASVLHRDLKPSNLLL---NASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLN 218
V+HRDLKP NLL N + ++KI DFG AR + + T Y APE LLN
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLN 182
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
Y + D+WS+G IL +++ + F D RS
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHD-----------------------RSLTCT 219
Query: 279 RYVRQLPRCRKQQFA---TRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
V + + +K F+ + N S A DL++ +L DPNKR+ + + +LQ
Sbjct: 220 SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279
Query: 336 LNDEPV 341
L+ P+
Sbjct: 280 LSSNPL 285
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEIXINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDW---KEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+GA+ +V V T E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++ F+ Y+V++L+ +L + I + + ++ + + Q+L + + H V+H
Sbjct: 72 I---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 126
Query: 169 RDLKPSNLLLNASCD---LKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
RDLKP NLLL + C +K+ DFGLA + + T Y +PE+L Y
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK-EAYGK 185
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+DIW+ G IL ++ P F +D Q +L ++ D
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDED---QHKLYQQIKAGAYD-----------------F 225
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
P ++ T P A +L+ +ML +P KRIT EAL+HP++
Sbjct: 226 P---SPEWDTVTPE----AKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEIXINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEIXINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDW---KEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 52/303 (17%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKI----GNAF--DNIIDARR-TLREIKLLRHM 98
P +GRG +V ++ T +E A+K I G +F + + + R TL+E+ +LR +
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 99 E-HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLR 156
H N+I +KD + +TF ++V++LM +L + L++ + + LL
Sbjct: 81 SGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
+ +H +++HRDLKP N+LL+ ++K+ DFG + + + T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 217 L-----NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE---LIGSPDDAS 268
N Y +D+WS G I+ ++ P F + + LR+I GSP+
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE--- 252
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
+ + S DL+ + LV P KR T EEAL HP
Sbjct: 253 ---------------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285
Query: 329 YLQ 331
+ Q
Sbjct: 286 FFQ 288
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 53/299 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG--------NAFDNIIDARRTLREIKLLRHME-H 100
IGRG +V V+ T E A+K + + + +A R RE +LR + H
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR--RETHILRQVAGH 159
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
++I + D ++ + +++V++LM +L + L++ + + LL +
Sbjct: 160 PHIITLID-----SYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 219
++H+ +++HRDLKP N+LL+ + +++ DFG + + + E T Y APE+L C
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL-KC 273
Query: 220 T------EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
+ Y +D+W+ G IL ++ P F + + LR+I E
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME-------------- 319
Query: 274 SDNARRYVRQLPRCRKQQFAT-RFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ QF++ + ++SS DL+ ++L DP R+T E+AL+HP+ +
Sbjct: 320 --------------GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKD 108
IG G+Y + ++ T E A+K I + R EI+ LLR+ +H N+I +KD
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKS------KRDPTEEIEILLRYGQHPNIITLKD 83
Query: 109 IIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ D VY+V ELM L +I+R + ++ L+ + + ++Y+H+ V
Sbjct: 84 VY-----DDGKYVYVVTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 167 LHRDLKPSNLL-LNASCD---LKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTE 221
+HRDLKPSN+L ++ S + ++I DFG A+ +E + T + APE +L
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLERQG 196
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y AA DIWS+G +L ++T T PDD L + ++
Sbjct: 197 YDAACDIWSLGVLLYTMLTG---------------YTPFANGPDDTPEEILARIGSGKFS 241
Query: 282 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ + S A DL+ KML DP++R+T LRHP++
Sbjct: 242 LS---------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 61
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 62 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 211
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 212 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKIGNA-FD---------NIIDARRTL-REIKL 94
+R +G GAYG V E AIK I + FD NI + EI L
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQ 153
L+ ++H N+I + D+ K Y+V E + +L + I + + + + Q
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKY-----FYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLL---NASCDLKIGDFGLARTTSETDFMTEYVVTRWY 210
+L G+ Y+H +++HRD+KP N+LL N+ ++KI DFGL+ S+ + + + T +Y
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 211 RAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLG 270
APE+L +Y D+WS G I+ ++ P F G+
Sbjct: 215 IAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQ---------------------- 250
Query: 271 FLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
N + ++++ + + + N S A +L++ ML +D NKR T EEAL ++
Sbjct: 251 -----NDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
Query: 331 Q 331
+
Sbjct: 306 K 306
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SXQEYSDW---KEKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 42/287 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
+G GA+ V A + T++ VAIK I ++ + EI +L ++H N++A+
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAK---KALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 108 DIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
DI ++ +Y++ +L+ +L I T+ ++Q+L +KY+H +
Sbjct: 83 DIY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 167 LHRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 223
+HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPYS 196
Query: 224 AAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQ 283
A+D WS+G I ++ P F +N + Q
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFEQ 229
Query: 284 LPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ + + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G GA+ V A + T++ VAIK I A + + ++ EI +L ++H N++A+ D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
I ++ +Y++ +L+ +L I T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 168 HRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPYSK 197
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
A+D WS+G I ++ P F +N + Q+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFEQI 230
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 50/324 (15%)
Query: 50 IGRGAYGIVCAAVN-SETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G G +G V ++ + + +VA+K I N AR + +K ++ + EN
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN-----K 81
Query: 109 IIRPPKKDTFN---DVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHS 163
+ D FN + I +EL+ + + ++ + Q H ++ YQL L+++H
Sbjct: 82 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141
Query: 164 ASVLHRDLKPSNLLL-----------NASCD--------LKIGDFGLARTTSETDFMTEY 204
+ H DLKP N+L + SC+ +++ DFG A T + + T
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTI 199
Query: 205 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 264
V TR YR PE++L + D+WS+GCIL E LF + L ++ +++G
Sbjct: 200 VATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258
Query: 265 DDASL------------GFLRSDNAR--RYVRQLPRCRK-QQFATRFPNKSSGAVDLLEK 309
+ G + +N+ RYV++ C+ + + + + DL+ +
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE--NCKPLKSYMLQDSLEHVQLFDLMRR 316
Query: 310 MLVFDPNKRITVEEALRHPYLQSL 333
ML FDP +RIT+ EAL HP+ L
Sbjct: 317 MLEFDPAQRITLAEALLHPFFAGL 340
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G GA+ V A + T++ VAIK I A + + ++ EI +L ++H N++A+ D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
I ++ +Y++ +L+ +L I T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 168 HRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPYSK 197
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
A+D WS+G I ++ P F +N + Q+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFEQI 230
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 126/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GAYG V AVN T E VA+K I+D +R + +EI + +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINAMLN 63
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 64 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 213
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 214 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 256
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G GA+ V A + T++ VAIK I A + + ++ EI +L ++H N++A+ D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
I ++ +Y++ +L+ +L I T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 168 HRDLKPSNLL---LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
HRDLKP NLL L+ + I DFGL++ ++ T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ-KPYSK 197
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
A+D WS+G I ++ P F +N + Q+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF---------------------------YDENDAKLFEQI 230
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ + + + + S A D + ++ DP KR T E+AL+HP++
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V +E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I Y++++L+ +L + I + + ++ + + Q+L + + H V+H
Sbjct: 90 ISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 169 RDLKPSNLLLNA---SCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
RDLKP NLLL + +K+ DFGLA E + T Y +PE+L Y
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK-DPYGK 203
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+W+ G IL ++ P F +D Q RL ++ D
Sbjct: 204 PVDLWACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------F 243
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
P ++ T P A DL+ KML +P+KRIT EAL+HP++
Sbjct: 244 P---SPEWDTVTPE----AKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 50/324 (15%)
Query: 50 IGRGAYGIVCAAVN-SETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G G +G V ++ + + +VA+K I N AR + +K ++ + EN
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN-----K 90
Query: 109 IIRPPKKDTFN---DVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHS 163
+ D FN + I +EL+ + + ++ + Q H ++ YQL L+++H
Sbjct: 91 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 150
Query: 164 ASVLHRDLKPSNLLL-----------NASCD--------LKIGDFGLARTTSETDFMTEY 204
+ H DLKP N+L + SC+ +++ DFG A T + + T
Sbjct: 151 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTI 208
Query: 205 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 264
V TR YR PE++L + D+WS+GCIL E LF + L ++ +++G
Sbjct: 209 VATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 267
Query: 265 DDASL------------GFLRSDNAR--RYVRQLPRCRK-QQFATRFPNKSSGAVDLLEK 309
+ G + +N+ RYV++ C+ + + + + DL+ +
Sbjct: 268 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE--NCKPLKSYMLQDSLEHVQLFDLMRR 325
Query: 310 MLVFDPNKRITVEEALRHPYLQSL 333
ML FDP +RIT+ EAL HP+ L
Sbjct: 326 MLEFDPAQRITLAEALLHPFFAGL 349
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 146/295 (49%), Gaps = 48/295 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNA-FDNI--IDARRTLREIKLLRHMEHENVIAI 106
IG+GA+ +V +N ET ++ A+K + A F + + RE + ++H +++
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV-- 89
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDL--HQIIRSDQQL--TDDHCQYFLYQLLRGLKYV 161
+++ D +Y+V+E MD DL + R+D ++ +++ Q+L L+Y
Sbjct: 90 -ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 162 HSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLL 217
H +++HRD+KP N+LL + S +K+GDFG+A E+ + V T + APE++
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 218 NCTEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
Y +D+W G IL +++ P + K+ RL +I
Sbjct: 207 R-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGII--------------- 245
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + PR ++ + S A DL+ +ML+ DP +RITV EAL HP+L+
Sbjct: 246 -KGKYKMNPR--------QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 50/324 (15%)
Query: 50 IGRGAYGIVCAAVN-SETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G G +G V ++ + + +VA+K I N AR + +K ++ + EN
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN-----K 113
Query: 109 IIRPPKKDTFN---DVYIVYELMDTDLHQIIRSD--QQLTDDHCQYFLYQLLRGLKYVHS 163
+ D FN + I +EL+ + + ++ + Q H ++ YQL L+++H
Sbjct: 114 FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 173
Query: 164 ASVLHRDLKPSNLLL-----------NASCD--------LKIGDFGLARTTSETDFMTEY 204
+ H DLKP N+L + SC+ +++ DFG A T + + T
Sbjct: 174 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTI 231
Query: 205 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSP 264
V TR YR PE++L + D+WS+GCIL E LF + L ++ +++G
Sbjct: 232 VATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 290
Query: 265 DDASL------------GFLRSDNAR--RYVRQLPRCRK-QQFATRFPNKSSGAVDLLEK 309
+ G + +N+ RYV++ C+ + + + + DL+ +
Sbjct: 291 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE--NCKPLKSYMLQDSLEHVQLFDLMRR 348
Query: 310 MLVFDPNKRITVEEALRHPYLQSL 333
ML FDP +RIT+ EAL HP+ L
Sbjct: 349 MLEFDPAQRITLAEALLHPFFAGL 372
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V + T +E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++ F+ Y+V++L+ +L + I + + ++ + + Q+L + + H ++H
Sbjct: 72 I---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 169 RDLKPSNLLL---NASCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
RDLKP NLLL + +K+ DFGLA + + T Y +PE+L Y
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK-DPYGK 185
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+W+ G IL ++ P F +D Q RL ++ D
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------F 225
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
P ++ T P A DL+ KML +P KRIT EAL+HP++
Sbjct: 226 P---SPEWDTVTPE----AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V + T +E A K I + D ++ RE ++ R ++H N++ + D
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I ++ F+ Y+V++L+ +L + I + + ++ + + Q+L + + H ++H
Sbjct: 72 I---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 169 RDLKPSNLLL---NASCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
RDLKP NLLL + +K+ DFGLA + + T Y +PE+L Y
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK-DPYGK 185
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+W+ G IL ++ P F +D Q RL ++ D
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------F 225
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
P ++ T P A DL+ KML +P KRIT EAL+HP++
Sbjct: 226 P---SPEWDTVTPE----AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 138/309 (44%), Gaps = 48/309 (15%)
Query: 31 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR 90
N+Y S YV IG G+Y V+ T E A+K I + R
Sbjct: 17 NLYFQSMVFSDGYVVK-ETIGVGSYSECKRCVHKATNMEYAVKVIDKS------KRDPSE 69
Query: 91 EIK-LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHC 147
EI+ LLR+ +H N+I +KD+ D VY+V ELM L +I+R + ++
Sbjct: 70 EIEILLRYGQHPNIITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQ-KFFSEREA 123
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLL-----NASCDLKIGDFGLARTT-SETDFM 201
+ L+ + + ++Y+HS V+HRDLKPSN+L N C L+I DFG A+ +E +
Sbjct: 124 SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLL 182
Query: 202 TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE+L Y DIWS+G +L ++ T
Sbjct: 183 MTPCYTANFVAPEVLKR-QGYDEGCDIWSLGILLYTMLAG---------------YTPFA 226
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
P D L + ++ + S A DL+ KML DP++R+T
Sbjct: 227 NGPSDTPEEILTRIGSGKFTLS---------GGNWNTVSETAKDLVSKMLHVDPHQRLTA 277
Query: 322 EEALRHPYL 330
++ L+HP++
Sbjct: 278 KQVLQHPWV 286
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 41/284 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+ GIVC A + + VA+KK+ D RR L E+ ++R +HENV+ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +++++V E ++ I + ++ ++ +L+ L +H+ V+
Sbjct: 215 NSYL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRD+K ++LL +K+ DFG A+ + E V T ++ APEL+ Y +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEV 328
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
DIWS+G ++ E++ EP + + + +++I DN ++ L +
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----------------RDNLPPRLKNLHK 372
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S L+++LV DP +R T E L+HP+L
Sbjct: 373 V------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+ GIVC A + + VA+KK+ D RR L E+ ++R +HENV+ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +++++V E ++ I + ++ ++ +L+ L +H+ V+
Sbjct: 138 N-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRD+K ++LL +K+ DFG A+ + E V T ++ APE L++ Y +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEV 251
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
DIWS+G ++ E++ EP + + + +++I DN ++ L +
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----------------RDNLPPRLKNLHK 295
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S L+++LV DP +R T E L+HP+L
Sbjct: 296 V------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 132/290 (45%), Gaps = 47/290 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKD 108
IG G+Y V+ T E A+K I + R EI+ LLR+ +H N+I +KD
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS------KRDPSEEIEILLRYGQHPNIITLKD 88
Query: 109 IIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ D VY+V ELM L +I+R + ++ + L+ + + ++Y+HS V
Sbjct: 89 VY-----DDGKHVYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 167 LHRDLKPSNLLL-----NASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCT 220
+HRDLKPSN+L N C L+I DFG A+ +E + T + APE+L
Sbjct: 143 VHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR-Q 200
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y DIWS+G +L ++ T P D L + ++
Sbjct: 201 GYDEGCDIWSLGILLYTMLAG---------------YTPFANGPSDTPEEILTRIGSGKF 245
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ S A DL+ KML DP++R+T ++ L+HP++
Sbjct: 246 TLS---------GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 126/286 (44%), Gaps = 52/286 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL-------REIKLLRHME 99
++ +G GA G V AVN T E VA+K I+D +R + +EI + + +
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVK--------IVDMKRAVDCPENIKKEICINKMLN 62
Query: 100 HENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
HENV+ R N Y+ E +L I D + + Q F +QL+ G+
Sbjct: 63 HENVVKFYGHRR-----EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPEL 215
Y+H + HRD+KP NLLL+ +LKI DFGLA R + + + T Y APEL
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
L + +D+WS G +L ++ E P D SD
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE--------------------LPWDQP-----SD 212
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+ + Y K+ + + S + LL K+LV +P+ RIT+
Sbjct: 213 SCQEYSDWK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITI 255
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 44/308 (14%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL-L 95
FEV + + PI +GRGAYG+V + + + +A+K+I A N + +R L ++ + +
Sbjct: 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISM 104
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDL----HQIIRSDQQLTDDHCQYFL 151
R ++ + + DV+I ELMDT L Q+I Q + +D
Sbjct: 105 RTVDCPFTVTFYGALF-----REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 152 YQLLRGLKYVHSA-SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWY 210
+++ L+++HS SV+HRD+KPSN+L+NA +K+ DFG++ ++ T + Y
Sbjct: 160 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPY 219
Query: 211 RAPELL---LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
APE + LN Y+ DIWS+G + E+ FP + + + +++ P
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPS-- 275
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
P+ +F+ F VD + L + +R T E ++H
Sbjct: 276 -----------------PQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELMQH 311
Query: 328 PYLQSLHD 335
P+ +LH+
Sbjct: 312 PFF-TLHE 318
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+ GIVC A + + VA+KK+ D RR L E+ ++R +HENV+ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +++++V E ++ I + ++ ++ +L+ L +H+ V+
Sbjct: 95 N-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRD+K ++LL +K+ DFG A+ + E V T ++ APE L++ Y +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEV 208
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
DIWS+G ++ E++ EP + + + +++I DN ++ L +
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----------------RDNLPPRLKNLHK 252
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S L+++LV DP +R T E L+HP+L
Sbjct: 253 V------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+ GIVC A + + VA+KK+ D RR L E+ ++R +HENV+ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +++++V E ++ I + ++ ++ +L+ L +H+ V+
Sbjct: 93 N-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRD+K ++LL +K+ DFG A+ + E V T ++ APE L++ Y +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEV 206
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
DIWS+G ++ E++ EP + + + +++I DN ++ L +
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----------------RDNLPPRLKNLHK 250
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S L+++LV DP +R T E L+HP+L
Sbjct: 251 V------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + TE T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 221
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 222 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 140/290 (48%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA++ I N ++ RE+++++ + H N++ +
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + ++ + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + E+ + Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 224 RVLRGKYRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 44/287 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN----AFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G +G V + T +VA+K + + D + RR ++ +KL RH ++I
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH---PHIIK 80
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ +I P +D+++V E + +L I + +L + + Q+L G+ Y H
Sbjct: 81 LYQVISTP-----SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
V+HRDLKP N+LL+A + KI DFGL+ S+ +F+ + Y APE++
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+DIWS G IL ++ +L F D+ +++
Sbjct: 196 EVDIWSSGVILYALLC--------------------------GTLPF-DDDHVPTLFKKI 228
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
C + ++ N S + LL+ ML DP KR T+++ H + +
Sbjct: 229 --CDGIFYTPQYLNPS--VISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+ GIVC A + + VA+KK+ D RR L E+ ++R +HENV+ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +++++V E ++ I + ++ ++ +L+ L +H+ V+
Sbjct: 88 N-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRD+K ++LL +K+ DFG A+ + E V T ++ APE L++ Y +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEV 201
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
DIWS+G ++ E++ EP + + + +++I DN ++ L +
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----------------RDNLPPRLKNLHK 245
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S L+++LV DP +R T E L+HP+L
Sbjct: 246 V------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 41/284 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+ GIVC A + + VA+KK+ D RR L E+ ++R +HENV+ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +++++V E ++ I + ++ ++ +L+ L +H+ V+
Sbjct: 84 N-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRD+K ++LL +K+ DFG A+ + E V T ++ APE L++ Y +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEV 197
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
DIWS+G ++ E++ EP + + + +++I DN ++ L +
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----------------RDNLPPRLKNLHK 241
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S L+++LV DP +R T E L+HP+L
Sbjct: 242 V------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 19/209 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+YG C + ++ ++ + K + + ++ +A + + E+ LLR ++H N++
Sbjct: 14 IGTGSYG-RCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 108 DIIRPPKKDTFNDVYIVYELMDT-DLHQII----RSDQQLTDDHCQYFLYQLLRGLKYVH 162
D I T +YIV E + DL +I + Q L ++ + QL LK H
Sbjct: 72 DRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 163 SAS-----VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELL 216
S VLHRDLKP+N+ L+ ++K+GDFGLAR + + DF E+V T +Y +PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE-Q 187
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLF 245
+N Y DIWS+GC+L E+ P F
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 155/328 (47%), Gaps = 44/328 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA+K I N ++ RE+++++ + H N++ +
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + ++ + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + + Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEP---VC 342
R + ++ F S+ +LL+K L+ +P+KR T+E+ ++ ++ H+ +DE V
Sbjct: 224 RVLRGKYRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE-DDELKPYVA 281
Query: 343 PRPFHFDFEHSSCTEDHIRELIWRESVK 370
P P D++ TE + RE ++
Sbjct: 282 PLP---DYKDPRRTELMVSMGYTREEIQ 306
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 139/290 (47%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA+K I N ++ RE+++++ + H N++ +
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + ++ + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + + Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 224 RVLRGKYRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 45/289 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIK-LLRHMEHENVIAIKD 108
IG G+Y + ++ T E A+K I + R EI+ LLR+ +H N+I +KD
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKS------KRDPTEEIEILLRYGQHPNIITLKD 83
Query: 109 IIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ D VY+V EL L +I+R + ++ L+ + + ++Y+H+ V
Sbjct: 84 VY-----DDGKYVYVVTELXKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 167 LHRDLKPSNLL-LNASCD---LKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTE 221
+HRDLKPSN+L ++ S + ++I DFG A+ +E + T + APE +L
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE-VLERQG 196
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y AA DIWS+G +L +T T PDD L + ++
Sbjct: 197 YDAACDIWSLGVLLYTXLTG---------------YTPFANGPDDTPEEILARIGSGKFS 241
Query: 282 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+ + S A DL+ K L DP++R+T LRHP++
Sbjct: 242 LS---------GGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 138/290 (47%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA+K I N ++ RE+++++ + H N++ +
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + ++ + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 224 RVLRGKYRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 75 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T+ T Y PE++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI-EGRMH 184
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 222
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 223 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 137/309 (44%), Gaps = 61/309 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI------------------------GNAFDNIIDA 85
IG+G+YG+V A N A+K + G
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 86 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDD 145
+ +EI +L+ ++H NV+ + +++ P +D +Y+V+EL++ + + + L++D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNED---HLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD-FMTEY 204
+++ L++G++Y+H ++HRD+KPSNLL+ +KI DFG++ +D ++
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 205 VVTRWYRAPELLLNCTEYTA--AIDIWSVGCIL-GEIMTREPLFPGKDYVHQLRLITELI 261
V T + APE L + + A+D+W++G L + + P + ++ ++ +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
PD P+ + DL+ +ML +P RI V
Sbjct: 258 EFPDQ------------------------------PDIAEDLKDLITRMLDKNPESRIVV 287
Query: 322 EEALRHPYL 330
E HP++
Sbjct: 288 PEIKLHPWV 296
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T+ T Y PE++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI-EGRMH 188
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 226
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 227 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T+ T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 221
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 222 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+GA+ +V V +E A I + D ++ RE ++ R ++H N++ + D
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 110 IRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
I Y++++L+ +L + I + + ++ + + Q+L + + H V+H
Sbjct: 79 ISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 133
Query: 169 RDLKPSNLLLNA---SCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
R+LKP NLLL + +K+ DFGLA E + T Y +PE+L Y
Sbjct: 134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK-DPYGK 192
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+W+ G IL ++ P F +D Q RL ++ D
Sbjct: 193 PVDLWACGVILYILLVGYPPFWDED---QHRLYQQIKAGAYD-----------------F 232
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
P ++ T P A DL+ KML +P+KRIT EAL+HP++
Sbjct: 233 P---SPEWDTVTPE----AKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 100 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 209
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 247
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 248 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 46/299 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + IV T +E A K I + +RR + RE+ +LR + H N+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKR--RLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + DI + DV ++ EL+ +L + + LT+D FL Q+L G+ Y+H
Sbjct: 71 ITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
S + H DLKP N++L + +K+ DFG+A + T + APE ++N
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 184
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
D+WS+G I +++ F G+ L I+ + D+
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY---------- 234
Query: 279 RYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
F N S A D + ++LV DP +R+T+ ++L H +++++ N
Sbjct: 235 -----------------FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 43/313 (13%)
Query: 42 KYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEH 100
KY IG G + V A + T E VAIK + N + D R EI+ L+++ H
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRH 67
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
+++ + ++ +T N +++V E +L I S +L+++ + Q++ +
Sbjct: 68 QHICQLYHVL-----ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVV-TRWYRAPELLL 217
YVHS HRDLKP NLL + LK+ DFGL A+ D+ + + Y APEL+
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNA 277
+ + D+WS+G +L +M GFL D+
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMC-----------------------------GFLPFDDD 213
Query: 278 RRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
R + ++ + SS + LL++ML DP KRI+++ L HP++ ++
Sbjct: 214 NVMALYKKIMRGKYDVPKWLSPSS--ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
Query: 338 DEPVCPRPF-HFD 349
E PF H D
Sbjct: 272 VEWQSKNPFIHLD 284
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T+ T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 221
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 222 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 138/290 (47%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA+K I N ++ RE+++++ + H N++ +
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 72 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + + Y APEL
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 187 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 216
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 217 RVLRGKYRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 221
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 222 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 139/290 (47%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA++ I N ++ RE+++++ + H N++ +
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + ++ + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + + Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL+K L+ +P+KR T+E+ ++ ++ H+
Sbjct: 224 RVLRGKYRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 78 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 187
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 217
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 218 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 213
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 214 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 188
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 226
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 227 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 91 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 200
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 238
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 239 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 186
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 224
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 225 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 186
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 216
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 217 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 19/209 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+YG C + ++ ++ + K + + ++ +A + + E+ LLR ++H N++
Sbjct: 14 IGTGSYG-RCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 108 DIIRPPKKDTFNDVYIVYELMDT-DLHQII----RSDQQLTDDHCQYFLYQLLRGLKYVH 162
D I T +YIV E + DL +I + Q L ++ + QL LK H
Sbjct: 72 DRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 163 SAS-----VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELL 216
S VLHRDLKP+N+ L+ ++K+GDFGLAR + +T F +V T +Y +PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE-Q 187
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLF 245
+N Y DIWS+GC+L E+ P F
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 73 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 182
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 212
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 213 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 19/209 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
IG G+YG C + ++ ++ + K + + ++ +A + + E+ LLR ++H N++
Sbjct: 14 IGTGSYG-RCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 108 DIIRPPKKDTFNDVYIVYELMDT-DLHQII----RSDQQLTDDHCQYFLYQLLRGLKYVH 162
D I T +YIV E + DL +I + Q L ++ + QL LK H
Sbjct: 72 DRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 163 SAS-----VLHRDLKPSNLLLNASCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELL 216
S VLHRDLKP+N+ L+ ++K+GDFGLAR + +T F +V T +Y +PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE-Q 187
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLF 245
+N Y DIWS+GC+L E+ P F
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL---REIKLLRHMEHENVIAI 106
+G+G YGIV A + + +AIK+I D+R + EI L +H++H+N++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHLKHKNIV-- 82
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ---YFLYQLLRGLKYVHS 163
+ ++ F +++ ++ L ++RS D+ Q ++ Q+L GLKY+H
Sbjct: 83 -QYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 164 ASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTE 221
++HRD+K N+L+N S LKI DFG ++ + + TE + T Y APE++
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 222 -YTAAIDIWSVGCILGEIMTREPLF 245
Y A DIWS+GC + E+ T +P F
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL---REIKLLRHMEHENVIAI 106
+G+G YGIV A + + +AIK+I D+R + EI L +H++H+N++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHLKHKNIV-- 68
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ---YFLYQLLRGLKYVHS 163
+ ++ F +++ ++ L ++RS D+ Q ++ Q+L GLKY+H
Sbjct: 69 -QYLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 164 ASVLHRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTE 221
++HRD+K N+L+N S LKI DFG ++ + + TE + T Y APE++
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 222 -YTAAIDIWSVGCILGEIMTREPLF 245
Y A DIWS+GC + E+ T +P F
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 45/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G+YG V A++ ET + VAIK++ D + ++EI +++ + +V+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 110 IRPPKKDTFNDVYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
K+T D++IV E + IIR ++ LT+D L L+GL+Y+H +
Sbjct: 93 YF---KNT--DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE---YVVTRWYRAPELLLNCTEYTA 224
HRD+K N+LLN K+ DFG+A TD M + + T ++ APE++ Y
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG-YNC 204
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
DIWS+G E+ +P P D +H +R I + +P
Sbjct: 205 VADIWSLGITAIEMAEGKP--PYAD-IHPMRAIFMIPTNPP------------------- 242
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
P RK + S D +++ LV P +R T + L+HP+++S
Sbjct: 243 PTFRKPELW------SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXI-EGRXH 188
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 226
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 227 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITA 267
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 75 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMI-EGRMH 184
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 222
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 223 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T EVAIK I N ++ RE+++++ + H N++ +
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y++ E ++ + + ++ + + Q++ ++Y H
Sbjct: 77 FEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + Y APEL
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 192 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 221
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL++ LV +P KR T+E+ ++ ++ + H+
Sbjct: 222 RVLRGKYRIPF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 270
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 56/295 (18%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMD--------TDLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
F+D VY +++ +L ++ + D+Q T ++ +L L
Sbjct: 79 YGY--------FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT----YITELANAL 126
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-E 184
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
+ +D+WS+G + E + +P F Y + I+ +
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------ 226
Query: 279 RYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 227 ------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 100 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + + T Y PE++ +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMI-EGRMH 209
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 247
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 248 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 54/296 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVI 104
++ IG G +G+ + T+E VA+K I G A D + REI R + H N++
Sbjct: 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ-----REIINHRSLRHPNIV 79
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
K++I P + I+ E +L++ I + + ++D ++F QLL G+ Y HS
Sbjct: 80 RFKEVILTPTH-----LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 164 ASVLHRDLKPSNLLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
+ HRDLK N LL+ S LKI DFG ++++ V T Y APE+LL E
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR-QE 193
Query: 222 YTAAI-DIWSVGCIL-----GEIMTREPLFPGKDYVHQL-RLITELIGSPDDASLGFLRS 274
Y I D+WS G L G +P P +DY + R+++ PDD
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYSIPDD-------- 244
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+R P C L+ ++ V DP RI++ E H +
Sbjct: 245 ------IRISPEC----------------CHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G+G + +++T+E A K + + R + EI + R + H++V+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 109 IIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
ND V++V EL L ++ + + LT+ +Y+L Q++ G +Y+H V
Sbjct: 109 FFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 162
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
+HRDLK NL LN ++KIGDFGLA T E D + V+ T Y APE +L+ ++
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSF 220
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+WS+GCI + T L+G P F S Y+
Sbjct: 221 EVDVWSIGCI---------------------MYTLLVGKPP-----FETSCLKETYL--- 251
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R +K +++ + + A L++KML DP R T+ E L + S
Sbjct: 252 -RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 136/290 (46%), Gaps = 37/290 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T EVAIK I N ++ RE+++++ + H N++ +
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y++ E ++ + + ++ + + Q++ ++Y H
Sbjct: 80 FEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + Y APEL
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 224
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
R + ++ F S+ +LL++ LV +P KR T+E+ ++ ++ + H+
Sbjct: 225 RVLRGKYRIPF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 46/299 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + IV T +E A K I + +RR + RE+ +LR + H N+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKR--RLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + DI + DV ++ EL+ +L + + LT+D FL Q+L G+ Y+H
Sbjct: 92 ITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
S + H DLKP N++L + +K+ DFG+A + T + APE ++N
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 205
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
D+WS+G I +++ F G+ L I+ + D+
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY---------- 255
Query: 279 RYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLN 337
F N S A D + ++LV DP +R+ + ++L H +++++ N
Sbjct: 256 -----------------FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRN 297
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A + + +A+K + A LR E+++ H+ H N++ +
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 71 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 180
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 210
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 211 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G+G + +++T+E A K + + R + EI + R + H++V+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 109 IIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
ND V++V EL L ++ + + LT+ +Y+L Q++ G +Y+H V
Sbjct: 107 FFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 160
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
+HRDLK NL LN ++KIGDFGLA T E D + V+ T Y APE +L+ ++
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSF 218
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+WS+GCI + T L+G P F S Y+
Sbjct: 219 EVDVWSIGCI---------------------MYTLLVGKPP-----FETSCLKETYL--- 249
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R +K +++ + + A L++KML DP R T+ E L + S
Sbjct: 250 -RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 295
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + + T Y PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMI-EGRMH 186
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 216
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 217 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 76 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI +FG + + + T T Y PE++ +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 185
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 223
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 224 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + + + RE+++ H+ H N++ +
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 78 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T T Y PE++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 187
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + P F Y R I+ +
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---------------------- 225
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L + ++R+T+ E L HP++++
Sbjct: 226 --------EFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 49/310 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G+GA+G V A N+ AIKKI + + + L E+ LL + H+ V+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL---STILSEVMLLASLNHQYVVRY 67
Query: 107 -------KDIIRP----PKKDTFNDVYIVYELMDTD-LHQIIRSDQ--QLTDDHCQYFLY 152
++ ++P KK T ++I E + L+ +I S+ Q D++ + F
Sbjct: 68 YAAWLERRNFVKPMTAVKKKST---LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---------------SE 197
Q+L L Y+HS ++HRDLKP N+ ++ S ++KIGDFGLA+
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 198 TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLI 257
+D +T + T Y A E+L Y ID++S+G I E++ P G + V+ L+ +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKL 241
Query: 258 TEL-IGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPN 316
+ I P D DN + +++ R PNK GA LL + +
Sbjct: 242 RSVSIEFPPDF------DDNKMKVEKKIIRL----LIDHDPNKRPGARTLLNSGWLPVKH 291
Query: 317 KRITVEEALR 326
+ ++EAL+
Sbjct: 292 QDEVIKEALK 301
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G+G + +++T+E A K + + R + EI + R + H++V+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 109 IIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
ND V++V EL L ++ + + LT+ +Y+L Q++ G +Y+H V
Sbjct: 83 FFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 136
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
+HRDLK NL LN ++KIGDFGLA T E D + V+ T Y APE +L+ ++
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSF 194
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+WS+GCI + T L+G P F S Y+
Sbjct: 195 EVDVWSIGCI---------------------MYTLLVGKPP-----FETSCLKETYL--- 225
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R +K +++ + + A L++KML DP R T+ E L + S
Sbjct: 226 -RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMI-EGRMH 186
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 224
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 225 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 53/290 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR------EIKLLRHMEHENV 103
IG G+ GIVC A + +VA+K ++D R+ R E+ ++R +H NV
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--------MMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 104 IAI-KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + K + +++++ E + I S +L ++ +L+ L Y+H
Sbjct: 105 VEMYKSYL------VGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
+ V+HRD+K ++LL +K+ DFG A+ + + V T ++ APE +++ +
Sbjct: 159 AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-VISRSL 217
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y +DIWS+G ++ E++ EP + V ++ + + SP
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPP---------------- 258
Query: 282 RQLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYL 330
P+ + +K S + D LE+MLV DP +R T +E L HP+L
Sbjct: 259 ---PKLKNS-------HKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 213
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 214 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI +FG + + + T T Y PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMI-EGRMH 186
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 224
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 225 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 49/310 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G+GA+G V A N+ AIKKI + + + L E+ LL + H+ V+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL---STILSEVMLLASLNHQYVVRY 67
Query: 107 -------KDIIRP----PKKDTFNDVYIVYELMDT-DLHQIIRSDQ--QLTDDHCQYFLY 152
++ ++P KK T ++I E + L+ +I S+ Q D++ + F
Sbjct: 68 YAAWLERRNFVKPMTAVKKKST---LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---------------SE 197
Q+L L Y+HS ++HRDLKP N+ ++ S ++KIGDFGLA+
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 198 TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLI 257
+D +T + T Y A E+L Y ID++S+G I E++ P G + V+ L+ +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKL 241
Query: 258 TEL-IGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPN 316
+ I P D DN + +++ R PNK GA LL + +
Sbjct: 242 RSVSIEFPPDF------DDNKMKVEKKIIRL----LIDHDPNKRPGARTLLNSGWLPVKH 291
Query: 317 KRITVEEALR 326
+ ++EAL+
Sbjct: 292 QDEVIKEALK 301
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 188
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G D
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFLG---------------------------D 220
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + + + F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 76 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++ +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMI-EGRMH 185
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y + I+ +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------------------- 223
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 224 --------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 52/293 (17%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 75 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLA--RTTSETDFMTEYVVTRWYRAPELLLNCT 220
S V+HRD+KP NLLL ++ +LKI DFG + +S D + T Y PE++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL---CGTLDYLPPEMI-EGR 182
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+ +D+WS+G + E + +P F Y + I+ +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------- 222
Query: 281 VRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 223 ----------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 76 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 187
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G D
Sbjct: 188 V-NYEPLGLEADMWSIGVITYILLSGASPFLG---------------------------D 219
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + + + F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 188
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G D
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFLG---------------------------D 220
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + + + F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 76 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 187
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G D
Sbjct: 188 V-NYEPLGLEADMWSIGVITYILLSGASPFLG---------------------------D 219
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + + + F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 188
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G D
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFLG---------------------------D 220
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + + + F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 213
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 214 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 35/232 (15%)
Query: 30 YNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARR-- 87
YN N F + K IGRG + V A VA+KK+ FD ++DA+
Sbjct: 28 YNTLAN-FRIEKK-------IGRGQFSEVYRAACLLDGVPVALKKV-QIFD-LMDAKARA 77
Query: 88 -TLREIKLLRHMEHENVIA-----IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--- 137
++EI LL+ + H NVI I+D N++ IV EL D DL ++I+
Sbjct: 78 DCIKEIDLLKQLNHPNVIKYYASFIED----------NELNIVLELADAGDLSRMIKHFK 127
Query: 138 SDQQLTDDHCQY-FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLART-T 195
++L + + + QL L+++HS V+HRD+KP+N+ + A+ +K+GD GL R +
Sbjct: 128 KQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187
Query: 196 SETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPG 247
S+T V T +Y +PE + Y DIWS+GC+L E+ + F G
Sbjct: 188 SKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
R +G GA+G V + E IK I N + + + EI++L+ ++H N+I I
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTI-NKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 108 DIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSD---QQLTDDHCQYFLYQLLRGLKYVH 162
++ + ++++YIV E + L +I+ + + L++ + + Q++ L Y H
Sbjct: 87 EVF-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 163 SASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 219
S V+H+DLKP N+L + +KI DFGLA + T T Y APE+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR- 200
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARR 279
+ T DIWS G ++ ++T F G +
Sbjct: 201 -DVTFKCDIWSAGVVMYFLLTGCLPFTG----------------------------TSLE 231
Query: 280 YVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
V+Q ++ +A + AVDLL++ML DP +R + + L H + +
Sbjct: 232 EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMI-EGRMH 186
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F A Y
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF------------------------------EANTYQE 216
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R + +F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 217 TYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 46/294 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + IV T +E A K I + +RR + RE+ +LR + H N+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKR--RLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + DI + DV ++ EL+ +L + + LT+D FL Q+L G+ Y+H
Sbjct: 78 ITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 132
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
S + H DLKP N++L + +K+ DFG+A + T + APE ++N
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 191
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
D+WS+G I +++ F G+ L ++ + D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETL------------TNISAVNYDFDE 239
Query: 279 RYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
Y F N S A D + ++LV DP +R+ + ++L H ++++
Sbjct: 240 EY---------------FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKA 278
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 17/216 (7%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
F+ KYV ++ IG G++G ++E + IK+I + + + + RE+ +L
Sbjct: 20 FQSMEKYVR-LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQL--TDDHCQYF 150
+M+H N++ ++ +F + +Y +MD DL + I + + + +D +
Sbjct: 79 NMKHPNIVQYRE--------SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET-DFMTEYVVTRW 209
Q+ LK+VH +LHRD+K N+ L +++GDFG+AR + T + + T +
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY 190
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 245
Y +PE+ N Y DIW++GC+L E+ T + F
Sbjct: 191 YLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAF 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE++ N D+WS+G I +++ F G L ++ +
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+D F N S+ A D + ++LV DP KR+T+
Sbjct: 234 YEFEDEY---------------------------FSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE++ N D+WS+G I +++ F G
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLG-------------- 219
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
D + + + + F N S+ A D + ++LV DP KR+T+
Sbjct: 220 -------------DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE++ N D+WS+G I +++ F G L
Sbjct: 175 KNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------- 226
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
A++ + + Y F N S+ A D + ++LV DP KR+T+
Sbjct: 227 -----ANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 44/250 (17%)
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQ 148
RE+ +L+ ++H NVI + ++ + DV ++ EL+ +L + + LT++
Sbjct: 63 REVSILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY 204
FL Q+L G+ Y+HS + H DLKP N++L +KI DFGLA + DF E+
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF 174
Query: 205 ---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
T + APE ++N D+WS+G I +++ F G L ++ +
Sbjct: 175 KNIFGTPAFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
+D F N S+ A D + ++LV DP KR+T+
Sbjct: 234 YEFEDE---------------------------YFSNTSALAKDFIRRLLVKDPKKRMTI 266
Query: 322 EEALRHPYLQ 331
+++L+HP+++
Sbjct: 267 QDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 188
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G D
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFLG---------------------------D 220
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + + + F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 52/296 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + +V T + A K I +RR + RE+ +L+ ++H NV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKR--RTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + ++ + DV ++ EL+ +L + + LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SASVLHRDLKPSNLLL----NASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAPEL 215
S + H DLKP N++L +KI DFGLA + DF E+ T + APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPEI 188
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
+ N D+WS+G I +++ F G L ++ + +D
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE-------- 239
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
F N S+ A D + ++LV DP KR+T++++L+HP+++
Sbjct: 240 -------------------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G+G + +++T+E A K + + R + EI + R + H++V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 109 IIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
ND V++V EL L ++ + + LT+ +Y+L Q++ G +Y+H V
Sbjct: 85 FFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
+HRDLK NL LN ++KIGDFGLA T E D + + T Y APE +L+ ++
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCGTPNYIAPE-VLSKKGHSF 196
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+WS+GCI + T L+G P F S Y+
Sbjct: 197 EVDVWSIGCI---------------------MYTLLVGKPP-----FETSCLKETYL--- 227
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R +K +++ + + A L++KML DP R T+ E L + S
Sbjct: 228 -RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G+G + +++T+E A K + + R + EI + R + H++V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 109 IIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
ND V++V EL L ++ + + LT+ +Y+L Q++ G +Y+H V
Sbjct: 85 FFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
+HRDLK NL LN ++KIGDFGLA T E D + + T Y APE +L+ ++
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCGTPNYIAPE-VLSKKGHSF 196
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+WS+GCI + T L+G P F S Y+
Sbjct: 197 EVDVWSIGCI---------------------MYTLLVGKPP-----FETSCLKETYL--- 227
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R +K +++ + + A L++KML DP R T+ E L + S
Sbjct: 228 -RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAIKD 108
+G+G + +++T+E A K + + R + EI + R + H++V+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 109 IIRPPKKDTFND-VYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
ND V++V EL L ++ + + LT+ +Y+L Q++ G +Y+H V
Sbjct: 89 FFED------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV 142
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
+HRDLK NL LN ++KIGDFGLA T E D + + T Y APE +L+ ++
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKTLCGTPNYIAPE-VLSKKGHSF 200
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+WS+GCI + T L+G P F S Y+
Sbjct: 201 EVDVWSIGCI---------------------MYTLLVGKPP-----FETSCLKETYL--- 231
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
R +K +++ + + A L++KML DP R T+ E L + S
Sbjct: 232 -RIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI----GNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G + IV T E A K I A + RE+ +LR + H NVI
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ D+ + DV ++ EL+ +L + + L+++ F+ Q+L G+ Y+H+
Sbjct: 80 LHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 165 SVLHRDLKPSN-LLLNASC---DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+ H DLKP N +LL+ + +K+ DFGLA + T + APE ++N
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNYE 193
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
D+WS+G I +++ F G L IT + D
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD--------------- 238
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++F F + S A D + K+LV + KR+T++EALRHP++
Sbjct: 239 ---------EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 56/295 (18%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMD--------TDLHQIIRSDQQLTDDHCQYFLYQLLRGL 158
F+D VY +++ +L ++ + D+Q T ++ +L L
Sbjct: 79 YGY--------FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT----YITELANAL 126
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
Y HS V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMI-E 184
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
+ +D+WS+G + E + +P F Y + I+ +
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------ 226
Query: 279 RYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 227 ------------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI----GNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G + IV T E A K I A + RE+ +LR + H NVI
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ D+ + DV ++ EL+ +L + + L+++ F+ Q+L G+ Y+H+
Sbjct: 80 LHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 165 SVLHRDLKPSNLLLNASC----DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+ H DLKP N++L +K+ DFGLA + T + APE ++N
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNYE 193
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
D+WS+G I +++ F G L IT + D
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD--------------- 238
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++F F + S A D + K+LV + KR+T++EALRHP++
Sbjct: 239 ---------EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI----GNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G + IV T E A K I A + RE+ +LR + H NVI
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ D+ + DV ++ EL+ +L + + L+++ F+ Q+L G+ Y+H+
Sbjct: 80 LHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 165 SVLHRDLKPSNLLLNASC----DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+ H DLKP N++L +K+ DFGLA + T + APE ++N
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNYE 193
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
D+WS+G I +++ F G L IT + D
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD--------------- 238
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++F F + S A D + K+LV + KR+T++EALRHP++
Sbjct: 239 ---------EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 124/295 (42%), Gaps = 52/295 (17%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVI 104
++ IG G +G+ + + E VA+K I G D + REI R + H N++
Sbjct: 24 VKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIV 78
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
K++I P + IV E +L + I + + ++D ++F QL+ G+ Y H+
Sbjct: 79 RFKEVILTP-----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 164 ASVLHRDLKPSNLLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
V HRDLK N LL+ S LKI DFG ++ + V T Y APE+LL E
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLK-KE 192
Query: 222 YTAAI-DIWSVGCIL-----GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
Y + D+WS G L G +P P R++ PD
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD---------- 242
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
YV P CR L+ ++ V DP KRI++ E H +
Sbjct: 243 ----YVHISPECRH----------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 42/300 (14%)
Query: 50 IGRGAYGIVCAAVNSET--REEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
+G G+YG V ++SET R V I K +EI+LLR + H+NVI +
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 108 DIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKYVHSAS 165
D++ +K +Y+V E + +++ S + CQ Y QL+ GL+Y+HS
Sbjct: 73 DVLYNEEK---QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNCTEY 222
++H+D+KP NLLL LKI G+A + D + ++ PE+ +
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTF 189
Query: 223 TA-AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
+ +DIWS G L I T L+P DN +
Sbjct: 190 SGFKVDIWSAGVTLYNITTG--LYP-------------------------FEGDNIYKLF 222
Query: 282 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 341
+ + P S DLL+ ML ++P KR ++ + +H + + H + PV
Sbjct: 223 ENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 46/294 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNA-FDNI--IDARRTLREIKLLRHMEHENVIAI 106
IG+G + +V +N ET ++ A+K + A F + + RE + ++H +++
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV-- 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDL--HQIIRSDQQL--TDDHCQYFLYQLLRGLKYV 161
+++ D +Y+V+E MD DL + R+D ++ +++ Q+L L+Y
Sbjct: 92 -ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 162 HSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLL 217
H +++HRD+KP +LL + S +K+G FG+A E+ + V T + APE++
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 208
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNA 277
Y +D+W G IL +++ F Y + RL +I
Sbjct: 209 R-EPYGKPVDVWGCGVILFILLSGCLPF----YGTKERLFEGII---------------- 247
Query: 278 RRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + PR ++ + S A DL+ +ML+ DP +RITV EAL HP+L+
Sbjct: 248 KGKYKMNPR--------QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 48/291 (16%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
RP+G+G +G V A ++ +A+K + A LR E+++ H+ H N++ +
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
S V+HRD+KP NLLL ++ +LKI DFG + + + T Y PE++ +
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMI-EGRMH 183
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+WS+G + E + +P F Y D +R R
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTY-----------------------QDTYKRISR 220
Query: 283 QLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L +P++R + E L HP++ +
Sbjct: 221 V-------EFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 52/293 (17%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
RP+G+G +G V A +++ +A+K + + + RE+++ H+ H N++ +
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLT---DDHCQYFLYQLLRGLKYVH 162
F+D VY +++ L + R Q+L+ + ++ +L L Y H
Sbjct: 78 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLA--RTTSETDFMTEYVVTRWYRAPELLLNCT 220
S V+HRD+KP NLLL ++ +LKI DFG + +S D + T Y PE++
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMI-EGR 185
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
+ +D+WS+G + E + P F Y R I+ +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-------------------- 225
Query: 281 VRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F FP+ + GA DL+ ++L + ++R+T+ E L HP++++
Sbjct: 226 ----------EFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI----GNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G + IV T E A K I A + RE+ +LR + H NVI
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ D+ + DV ++ EL+ +L + + L+++ F+ Q+L G+ Y+H+
Sbjct: 80 LHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 165 SVLHRDLKPSN-LLLNASC---DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+ H DLKP N +LL+ + +K+ DFGLA + T + APE ++N
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNYE 193
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
D+WS+G I +++ F G L IT + D
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD--------------- 238
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++F F S A D + K+LV + KR+T++EALRHP++
Sbjct: 239 ---------EEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI----GNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G + IV T E A K I A + RE+ +LR + H NVI
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ D+ + DV ++ EL+ +L + + L+++ F+ Q+L G+ Y+H+
Sbjct: 80 LHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 165 SVLHRDLKPSNLLLNASC----DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+ H DLKP N++L +K+ DFGLA + T + APE ++N
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNYE 193
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
D+WS+G I +++ F G L IT + D
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD--------------- 238
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++F F S A D + K+LV + KR+T++EALRHP++
Sbjct: 239 ---------EEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 48/295 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNA-FDNI--IDARRTLREIKLLRHMEHENVIAI 106
IG+G + +V +N ET ++ A+K + A F + + RE + ++H +++
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV-- 89
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDL--HQIIRSDQQL--TDDHCQYFLYQLLRGLKYV 161
+++ D +Y+V+E MD DL + R+D ++ +++ Q+L L+Y
Sbjct: 90 -ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 162 HSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLL 217
H +++HRD+KP +LL + S +K+G FG+A E+ + V T + APE++
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 218 NCTEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
Y +D+W G IL +++ P + K+ RL +I
Sbjct: 207 R-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGII--------------- 245
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ + PR ++ + S A DL+ +ML+ DP +RITV EAL HP+L+
Sbjct: 246 -KGKYKMNPR--------QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 50/291 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG++G V AV TR A KKI F + D R +EI++++ ++H N+I + +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 110 IRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+ D+Y+V EL +L + + + + + +L + Y H +V H
Sbjct: 75 F-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 169 RDLKPSN-LLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
RDLKP N L L S D LK+ DFGLA M V T +Y +P++L Y
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPE 187
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
D WS G ++ ++ P F +P D + +
Sbjct: 188 CDEWSAGVMMYVLLCGYPPF----------------SAPTDXEV--------------ML 217
Query: 286 RCRKQQFATRFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ R+ F FP K S A L+ ++L P +RIT +AL H + +
Sbjct: 218 KIREGTFT--FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 50/291 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG++G V AV TR A KKI F + D R +EI++++ ++H N+I + +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 110 IRPPKKDTFNDVYIVYEL-MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+ D+Y+V EL +L + + + + + +L + Y H +V H
Sbjct: 92 F-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 169 RDLKPSN-LLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
RDLKP N L L S D LK+ DFGLA M V T +Y +P++L Y
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPE 204
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
D WS G ++ ++ P F +P D + +
Sbjct: 205 CDEWSAGVMMYVLLCGYPPF----------------SAPTDXEV--------------ML 234
Query: 286 RCRKQQFATRFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ R+ F FP K S A L+ ++L P +RIT +AL H + +
Sbjct: 235 KIREGTFT--FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 138/306 (45%), Gaps = 50/306 (16%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G + V A + T +EVA+K I N ++ RE+++ + + H N++ +
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
++I +T +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
++HRDLK NLLL+A ++KI DFG + + + + + Y APEL
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+WS+G IL +++ F G++ + +LR
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN-LKELR-----------------------------E 223
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR-------------HPYLQS 332
R + ++ F S+ +LL+K L+ +P+KR T+E+ + PY++
Sbjct: 224 RVLRGKYRIPF-YXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEP 282
Query: 333 LHDLND 338
L D D
Sbjct: 283 LPDYKD 288
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 44/308 (14%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL-L 95
EV + + PI +GRGAYG+V + + + +A+K+I A N + +R L ++ + +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISM 60
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDL----HQIIRSDQQLTDDHCQYFL 151
R ++ + + DV+I ELMDT L Q+I Q + +D
Sbjct: 61 RTVDCPFTVTFYGALFRE-----GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 115
Query: 152 YQLLRGLKYVHSA-SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWY 210
+++ L+++HS SV+HRD+KPSN+L+NA +K+ DFG++ + + Y
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPY 175
Query: 211 RAPELL---LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
APE + LN Y+ DIWS+G + E+ FP + + + +++ P
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPS-- 231
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRH 327
P+ +F+ F VD + L + +R T E ++H
Sbjct: 232 -----------------PQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELMQH 267
Query: 328 PYLQSLHD 335
P+ +LH+
Sbjct: 268 PFF-TLHE 274
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 52/295 (17%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVI 104
++ IG G +G+ + ++ E VA+K I G D + REI R + H N++
Sbjct: 23 VKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIV 77
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
K++I P + IV E +L + I + + ++D ++F QL+ G+ Y H+
Sbjct: 78 RFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 164 ASVLHRDLKPSNLLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
V HRDLK N LL+ S LKI DFG ++++ V T Y APE+LL E
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK-KE 191
Query: 222 YTAAI-DIWSVGCIL-----GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
Y + D+WS G L G +P P R++ PD
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD---------- 241
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
YV P CR L+ ++ V DP KRI++ E H +
Sbjct: 242 ----YVHISPECRH----------------LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 49/310 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G+GA+G V A N+ AIKKI + + + L E+ LL + H+ V+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL---STILSEVXLLASLNHQYVVRY 67
Query: 107 -------KDIIRP----PKKDTFNDVYIVYELMDT-DLHQIIRSDQ--QLTDDHCQYFLY 152
++ ++P KK T ++I E + L+ +I S+ Q D++ + F
Sbjct: 68 YAAWLERRNFVKPXTAVKKKST---LFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---------------SE 197
Q+L L Y+HS ++HR+LKP N+ ++ S ++KIGDFGLA+
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 198 TDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLI 257
+D +T + T Y A E+L Y ID +S+G I E + P G + V+ L+ +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKL 241
Query: 258 TEL-IGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPN 316
+ I P D DN + +++ R PNK GA LL + +
Sbjct: 242 RSVSIEFPPDF------DDNKXKVEKKIIRL----LIDHDPNKRPGARTLLNSGWLPVKH 291
Query: 317 KRITVEEALR 326
+ ++EAL+
Sbjct: 292 QDEVIKEALK 301
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 48/293 (16%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG G +G+ + ++ E VA+K I + I A REI R + H N++
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERG-EKI--AANVKREIINHRSLRHPNIVRF 80
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
K++I P + IV E +L + I + + ++D ++F QL+ G+ Y H+
Sbjct: 81 KEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 166 VLHRDLKPSNLLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYT 223
V HRDLK N LL+ S LKI DFG ++++ V T Y APE+LL EY
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK-KEYD 194
Query: 224 AAI-DIWSVGCIL-----GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNA 277
+ D+WS G L G +P P R++ PD
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD------------ 242
Query: 278 RRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
YV P CR L+ ++ V DP KRI++ E H +
Sbjct: 243 --YVHISPECRH----------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 139/334 (41%), Gaps = 58/334 (17%)
Query: 18 KGVLTHGGKYVQYNVYGNLFEVSSKYVP-PIR--------------PIGRGAYGIVCAAV 62
+G + G V N +F++ +Y P P+ +G GA+G+V
Sbjct: 12 QGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVT 71
Query: 63 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 122
T A K + ++ D +EI+ + + H ++ + D + N++
Sbjct: 72 ERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV 124
Query: 123 IVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
++YE M ++ ++++D ++ Q+ +GL ++H + +H DLKP N++
Sbjct: 125 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 184
Query: 181 --SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN--CTEYTAAIDIWSVGCILG 236
S +LK+ DFGL + T + APE+ YT D+WSVG +L
Sbjct: 185 KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT---DMWSVG-VLS 240
Query: 237 EIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRF 296
I+ L ++ G DD +L R + C + F
Sbjct: 241 YIL--------------LSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 274
Query: 297 PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S D + K+L+ DPN R+T+ +AL HP+L
Sbjct: 275 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
R +G+G + + +T+E A K + + + + EI + + +++ +V+
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D F VY+V E+ L ++ + + +T+ +YF+ Q ++G++Y+H+
Sbjct: 108 HGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
V+HRDLK NL LN D+KIGDFGLA + + + + T Y APE+L ++
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK-KGHSF 221
Query: 225 AIDIWSVGCILGEIMTREPLF 245
+DIWS+GCIL ++ +P F
Sbjct: 222 EVDIWSLGCILYTLLVGKPPF 242
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 139/334 (41%), Gaps = 58/334 (17%)
Query: 18 KGVLTHGGKYVQYNVYGNLFEVSSKYVP-PIR--------------PIGRGAYGIVCAAV 62
+G + G V N +F++ +Y P P+ +G GA+G+V
Sbjct: 118 QGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVT 177
Query: 63 NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY 122
T A K + ++ D +EI+ + + H ++ + D + N++
Sbjct: 178 ERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV 230
Query: 123 IVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
++YE M ++ ++++D ++ Q+ +GL ++H + +H DLKP N++
Sbjct: 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 290
Query: 181 --SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN--CTEYTAAIDIWSVGCILG 236
S +LK+ DFGL + T + APE+ YT D+WSVG +L
Sbjct: 291 KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT---DMWSVG-VLS 346
Query: 237 EIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRF 296
I+ L ++ G DD +L R + C + F
Sbjct: 347 YIL--------------LSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 380
Query: 297 PNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
S D + K+L+ DPN R+T+ +AL HP+L
Sbjct: 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
R +G+G + + +T+E A K + + + + EI + + +++ +V+
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D F VY+V E+ L ++ + + +T+ +YF+ Q ++G++Y+H+
Sbjct: 108 HGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYT 223
V+HRDLK NL LN D+KIGDFGLA T E D + + T Y APE+L ++
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKTLCGTPNYIAPEVLCK-KGHS 220
Query: 224 AAIDIWSVGCILGEIMTREPLF 245
+DIWS+GCIL ++ +P F
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPF 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
R +G+G + + +T+E A K + + + + EI + + +++ +V+
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D F VY+V E+ L ++ + + +T+ +YF+ Q ++G++Y+H+
Sbjct: 92 HGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLA-RTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
V+HRDLK NL LN D+KIGDFGLA + + + + T Y APE+L ++
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK-KGHSF 205
Query: 225 AIDIWSVGCILGEIMTREPLF 245
+DIWS+GCIL ++ +P F
Sbjct: 206 EVDIWSLGCILYTLLVGKPPF 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
+ IG+G + V A + T EVA+K I N ++ RE+++++ + H N++ +
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 108 DIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
++I +T +Y+V E ++ + + ++ + + Q++ ++Y H +
Sbjct: 81 EVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
+HRDLK NLLL+ ++KI DFG + + + + + + Y APEL +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEV 195
Query: 227 DIWSVGCILGEIMTREPLFPGKD 249
D+WS+G IL +++ F G++
Sbjct: 196 DVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 55/331 (16%)
Query: 25 GKY--VQYNVYGNLFE-VSSKYVPP---------------IRPIGRGAYGIVCAAVNSET 66
GKY + N Y +E + KYVP + +G GA+G+V V T
Sbjct: 16 GKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKAT 75
Query: 67 REEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYE 126
K I + +D EI ++ + H +I + D +D + V I+
Sbjct: 76 GRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAF----EDKYEMVLILEF 129
Query: 127 LMDTDLH-QIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLL--LNASCD 183
L +L +I D ++++ ++ Q GLK++H S++H D+KP N++ +
Sbjct: 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS 189
Query: 184 LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREP 243
+KI DFGLA + + + T + APE++ + D+W++G + +++
Sbjct: 190 VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLS 248
Query: 244 LFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGA 303
F G+D + L+ + RC + F + S A
Sbjct: 249 PFAGEDDLETLQ---------------------------NVKRCDWEFDEDAFSSVSPEA 281
Query: 304 VDLLEKMLVFDPNKRITVEEALRHPYLQSLH 334
D ++ +L +P KR+TV +AL HP+L+ H
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIAI 106
R +G+G + + +T+E A K + + + + EI + + +++ +V+
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ D F VY+V E+ L ++ + + +T+ +YF+ Q ++G++Y+H+
Sbjct: 108 HGFF---EDDDF--VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYT 223
V+HRDLK NL LN D+KIGDFGLA T E D + + T Y APE+L ++
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKXLCGTPNYIAPEVLCK-KGHS 220
Query: 224 AAIDIWSVGCILGEIMTREPLF 245
+DIWS+GCIL ++ +P F
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPF 242
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 46/292 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL------REIKLLRHMEHENV 103
+G G + IV T E A K I +RR + RE+ +LR + H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRA--SRRGVCREEIEREVSILRQVLHPNI 77
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
I + D+ + DV ++ EL+ +L + + L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 163 SASVLHRDLKPSNLLLNASC----DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
+ + H DLKP N++L +K+ DFGLA + T + APE ++N
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVN 191
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNAR 278
D+WS+G I +++ F G L IT + D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD------------- 238
Query: 279 RYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++F F S A D + K+LV + KR+T++EALRHP++
Sbjct: 239 -----------EEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN----AFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G +G V + T +VA+K + + D + +R ++ +KL RH ++I
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH---PHIIK 75
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ +I P D ++V E + +L I ++ + + Q+L + Y H
Sbjct: 76 LYQVISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
V+HRDLKP N+LL+A + KI DFGL+ S+ +F+ + + Y APE++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+DIWS G IL ++ F D H L ++ G V +
Sbjct: 191 EVDIWSCGVILYALLCGTLPF---DDEHVPTLFKKIRGG-----------------VFYI 230
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
P + AT LL ML DP KR T+++ H + +
Sbjct: 231 PEYLNRSVAT-----------LLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 126/295 (42%), Gaps = 52/295 (17%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVI 104
++ IG G +G+ + ++ E VA+K I G D + REI R + H N++
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIV 78
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
K++I P + IV E +L + I + + ++D ++F QL+ G+ Y H+
Sbjct: 79 RFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 164 ASVLHRDLKPSNLLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
V HRDLK N LL+ S LKI FG ++++ + V T Y APE+LL E
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLK-KE 192
Query: 222 YTAAI-DIWSVGCIL-----GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
Y + D+WS G L G +P P R++ PD
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD---------- 242
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
YV P CR L+ ++ V DP KRI++ E H +
Sbjct: 243 ----YVHISPECRH----------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSE-TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN--- 102
+ +G G +G V V+ VA+K I N AR + ++ + + +N
Sbjct: 38 VSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNL 97
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTD--DHCQYFLYQLLRGLKY 160
+ + D D + I +EL+ ++ + L ++ +QL + +K+
Sbjct: 98 CVQMFDWF-----DYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKF 152
Query: 161 VHSASVLHRDLKPSNLL-LNASCDL------------------KIGDFGLARTTSETDFM 201
+H + H DLKP N+L +N+ +L ++ DFG A T + +
Sbjct: 153 LHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDHEHH 210
Query: 202 TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
+ V TR YRAPE++L ++ D+WS+GCI+ E LF D L ++ ++
Sbjct: 211 STIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERIL 269
Query: 262 GSPDD--------------ASLGFLRSDNARRYVRQLPRCRK-QQFATRFPNKSSGAVDL 306
G L + + +A RYVR+ C+ +++ T + DL
Sbjct: 270 GPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRE--NCKPLRRYLTSEAEEHHQLFDL 327
Query: 307 LEKMLVFDPNKRITVEEALRHPYLQSL 333
+E ML ++P KR+T+ EAL+HP+ L
Sbjct: 328 IESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL- 203
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 204 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 248
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 249 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 289
Query: 329 YLQSL 333
+ +S+
Sbjct: 290 FFESV 294
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 53/329 (16%)
Query: 47 IRPIGRGAYG---IVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 103
++ +G+G++G +V S+ R+ A+K + A + D RT E +L + H +
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T +Y++ + + DL + + T++ +++L +L L ++H
Sbjct: 89 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 221
S +++RDLKP N+LL+ +K+ DFGL++ + + + + T Y APE ++N
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRG 202
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRY 280
+T + D WS G ++ E++T F GKD + +I + +G P FL S A+
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ-----FL-SPEAQSL 256
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLND-- 338
+R L + R P GA P+ VEE RH + ++ D N
Sbjct: 257 LRMLFK--------RNPANRLGA----------GPD---GVEEIKRHSFFSTI-DWNKLY 294
Query: 339 --------EPVCPRP---FHFDFEHSSCT 356
+P RP F+FD E ++ T
Sbjct: 295 RREIHPPFKPATGRPEDTFYFDPEFTAKT 323
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL- 207
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 208 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 252
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 253 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 293
Query: 329 YLQSL 333
+ +S+
Sbjct: 294 FFESV 298
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 125/295 (42%), Gaps = 52/295 (17%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKI--GNAFDNIIDARRTLREIKLLRHMEHENVI 104
++ IG G +G+ + ++ E VA+K I G D + REI R + H N++
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-----REIINHRSLRHPNIV 78
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
K++I P + IV E +L + I + + ++D ++F QL+ G+ Y H+
Sbjct: 79 RFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 164 ASVLHRDLKPSNLLLNASCD--LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
V HRDLK N LL+ S LKI FG ++++ V T Y APE+LL E
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK-KE 192
Query: 222 YTAAI-DIWSVGCIL-----GEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
Y + D+WS G L G +P P R++ PD
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD---------- 242
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
YV P CR L+ ++ V DP KRI++ E H +
Sbjct: 243 ----YVHISPECRH----------------LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 44/288 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN----AFDNIIDARRTLREIKLLRHMEHENVIA 105
+G G +G V + T +VA+K + + D + +R ++ +KL RH ++I
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH---PHIIK 75
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ +I P D ++V E + +L I ++ + + Q+L + Y H
Sbjct: 76 LYQVISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
V+HRDLKP N+LL+A + KI DFGL+ S+ +F+ + Y APE++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+DIWS G IL ++ F D H L ++ G V +
Sbjct: 191 EVDIWSCGVILYALLCGTLPF---DDEHVPTLFKKIRGG-----------------VFYI 230
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
P + AT LL ML DP KR T+++ H + +
Sbjct: 231 PEYLNRSVAT-----------LLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 40/297 (13%)
Query: 39 VSSKY-VPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRH 97
V+S Y V +G G +G V + T ++A K I + D EI ++
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQ 142
Query: 98 MEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLL 155
++H N+I + D ++ ND+ +V E +D +II LT+ F+ Q+
Sbjct: 143 LDHANLIQLYDAF-----ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC 197
Query: 156 RGLKYVHSASVLHRDLKPSNLLL--NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
G++++H +LH DLKP N+L + +KI DFGLAR + + T + AP
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
E ++N + D+WSVG I +++ F G
Sbjct: 258 E-VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG-------------------------- 290
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
DN + + CR F + S A + + K+L+ + + RI+ EAL+HP+L
Sbjct: 291 -DNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 203
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 204 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 248
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 249 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 289
Query: 329 YLQSL 333
+ +S+
Sbjct: 290 FFESV 294
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 251
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 252 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292
Query: 329 YLQSL 333
+ +S+
Sbjct: 293 FFESV 297
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 204
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 249
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 250 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290
Query: 329 YLQSL 333
+ +S+
Sbjct: 291 FFESV 295
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL- 204
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 249
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 250 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290
Query: 329 YLQSL 333
+ +S+
Sbjct: 291 FFESV 295
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 204
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 249
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 250 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290
Query: 329 YLQSL 333
+ +S+
Sbjct: 291 FFESV 295
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 207
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 208 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 252
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 253 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 293
Query: 329 YLQSL 333
+ +S+
Sbjct: 294 FFESV 298
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 22 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 188
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 189 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 233
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 234 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 274
Query: 329 YLQSL 333
+ +S+
Sbjct: 275 FFESV 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 251
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 252 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292
Query: 329 YLQSL 333
+ +S+
Sbjct: 293 FFESV 297
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 66/304 (21%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 43 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 209
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSD 275
TE +A + D+W++GCI+ +++ P F R+
Sbjct: 210 --TEKSACKSSDLWALGCIIYQLVAGLPPF---------------------------RAG 240
Query: 276 NARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPY 329
N +++ + A FP A DL+EK+LV D KR+ EE HP+
Sbjct: 241 NEYLIFQKIIKLEYDFPAAFFPK----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 296
Query: 330 LQSL 333
+S+
Sbjct: 297 FESV 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 251
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 252 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292
Query: 329 YLQSL 333
+ +S+
Sbjct: 293 FFESV 297
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT---LREIKLLRHMEHENVIAI 106
+G G++ V A T E AIK + +II + RE ++ ++H + +
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ +K F Y + +L + IR + +++ +++ L+Y+H +
Sbjct: 76 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYT 223
+HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL TE +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKS 188
Query: 224 A--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
A + D+W++GCI+ +++ P F G +Y+ ++I L D ++
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF 235
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 333
P+ R DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 236 ---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 45 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 211
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 212 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 256
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 257 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 297
Query: 329 YLQSL 333
+ +S+
Sbjct: 298 FFESV 302
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT---LREIKLLRHMEHENVIAI 106
+G G++ V A T E AIK + +II + RE ++ ++H + +
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ +K F Y + +L + IR + +++ +++ L+Y+H +
Sbjct: 74 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYT 223
+HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL TE +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKS 186
Query: 224 A--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
A + D+W++GCI+ +++ P F G +Y+ ++I L D ++
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF 233
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 333
P+ R DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 234 ---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT---LREIKLLRHMEHENVIAI 106
+G G++ V A T E AIK + +II + RE ++ ++H + +
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ +K F Y + +L + IR + +++ +++ L+Y+H +
Sbjct: 73 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYT 223
+HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL TE +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKS 185
Query: 224 A--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
A + D+W++GCI+ +++ P F G +Y+ ++I L D ++
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF 232
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 333
P+ R DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 233 ---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT---LREIKLLRHMEHENVIAI 106
+G G++ V A T E AIK + +II + RE ++ ++H + +
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ +K F Y + +L + IR + +++ +++ L+Y+H +
Sbjct: 75 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLLNCTEYT 223
+HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL TE +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKS 187
Query: 224 A--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
A + D+W++GCI+ +++ P F G +Y+ ++I L D ++
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEYDFPEKF 234
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYLQSL 333
P+ R DL+EK+LV D KR+ EE HP+ +S+
Sbjct: 235 ---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 74
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 75 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +TE T +Y APE +
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE-V 188
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 231
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 232 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 281 QSTKVPQTPL 290
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 56/314 (17%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
FEV + + PI +GRGAYG+V + + + A+K+I A N + +R L ++ +
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRI-RATVNSQEQKRLLXDLDISX 87
Query: 97 HMEHENVIAIKDIIRPPKKDTF-------NDVYIVYELMDTDL----HQIIRSDQQLTDD 145
+ P TF DV+I EL DT L Q+I Q + +D
Sbjct: 88 RT-----------VDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPED 136
Query: 146 HCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY 204
+++ L+++HS SV+HRD+KPSN+L+NA +K DFG++ +
Sbjct: 137 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 205 VVTRWYRAPELL---LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI 261
+ Y APE + LN Y+ DIWS+G E+ FP + + + +++
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQVV 254
Query: 262 GSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITV 321
P P+ +F+ F VD + L + +R T
Sbjct: 255 EEPS-------------------PQLPADKFSAEF-------VDFTSQCLKKNSKERPTY 288
Query: 322 EEALRHPYLQSLHD 335
E +HP+ +LH+
Sbjct: 289 PELXQHPFF-TLHE 301
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 47 IRPIGRGAYG---IVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 103
++ +G+G++G +V S+ R+ A+K + A + D RT E +L + H +
Sbjct: 30 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 89
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T +Y++ + + DL + + T++ +++L +L L ++H
Sbjct: 90 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 221
S +++RDLKP N+LL+ +K+ DFGL++ + + + + T Y APE ++N
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRG 203
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSP 264
+T + D WS G ++ E++T F GKD + +I + +G P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 47 IRPIGRGAYG---IVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 103
++ +G+G++G +V S+ R+ A+K + A + D RT E +L + H +
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T +Y++ + + DL + + T++ +++L +L L ++H
Sbjct: 89 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 221
S +++RDLKP N+LL+ +K+ DFGL++ + + + + T Y APE ++N
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRG 202
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSP 264
+T + D WS G ++ E++T F GKD + +I + +G P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 48 RPIGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 104
R IG+G +G+V ++ R + AIK + + LRE L+R + H NV+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ-LTDDHCQYFLYQLLRGLKYVHS 163
A+ I+ PP + V + Y + DL Q IRS Q+ T F Q+ RG++Y+
Sbjct: 86 ALIGIMLPP--EGLPHVLLPY-MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 164 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT--- 220
+HRDL N +L+ S +K+ DFGLAR + EY + +R L + T
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILD----REYYSVQQHRHARLPVKWTALE 198
Query: 221 -----EYTAAIDIWSVGCILGEIMTR 241
+T D+WS G +L E++TR
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTR 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ A T E AIK I++ R ++E K+ + ++H
Sbjct: 38 LGEGSFSTTVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 204
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 249
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 250 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290
Query: 329 YLQSL 333
+ +S+
Sbjct: 291 FFESV 295
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + L + IR + +++ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGCLLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL- 206
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G +Y+ ++I L
Sbjct: 207 --TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------LEY 251
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 252 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292
Query: 329 YLQSL 333
+ +S+
Sbjct: 293 FFESV 297
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 39/284 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+GA G V A++ T +EVAI+++ + EI ++R ++ N++ D
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
+++++V E + + ++ + + + L+ L+++HS V+HR
Sbjct: 86 YL-----VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 170 DLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 228
D+K N+LL +K+ DFG A+ T E +E V T ++ APE++ Y +DI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR-KAYGPKVDI 199
Query: 229 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 288
WS+G + E++ EP + ++ + L LI G+P+
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE----------------------- 235
Query: 289 KQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ P K S D L + L D KR + +E L+H +L+
Sbjct: 236 -----LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 25/273 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA-IKD 108
IG+G++G V +++ T+E VAIK I + + + +EI +L + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 109 IIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
++ K ++I+ E + + L + + L ++L+GL Y+HS +H
Sbjct: 86 YLKSTK------LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIH 139
Query: 169 RDLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAID 227
RD+K +N+LL+ D+K+ DFG+A ++T +V T ++ APE ++ + Y D
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDFKAD 198
Query: 228 IWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL--- 284
IWS+G E+ EP P D +H +R++ LI +L S + +V
Sbjct: 199 IWSLGITAIELAKGEP--PNSD-LHPMRVLF-LIPKNSPPTLEGQHSKPFKEFVEACLNK 254
Query: 285 -PRCR-------KQQFATRFPNKSSGAVDLLEK 309
PR R K +F TR+ K+S +L+++
Sbjct: 255 DPRFRPTAKELLKHKFITRYTKKTSFLTELIDR 287
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G +G V ++ +T E+VAIK+ R L EI++++ + H NV++ +++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSAREV 81
Query: 110 IRPPKKDTFNDV-YIVYELMDT-DLHQIIRSDQQ---LTDDHCQYFLYQLLRGLKYVHSA 164
+K ND+ + E + DL + + + L + + L + L+Y+H
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 165 SVLHRDLKPSNLLLNASCDL---KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
++HRDLKP N++L KI D G A+ + + TE+V T Y APELL +
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ-KK 200
Query: 222 YTAAIDIWSVGCILGEIMTR-EPLFP 246
YT +D WS G + E +T P P
Sbjct: 201 YTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G +G V ++ +T E+VAIK+ R L EI++++ + H NV++ +++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNVVSAREV 80
Query: 110 IRPPKKDTFNDV-YIVYELMDT-DLHQIIRSDQQ---LTDDHCQYFLYQLLRGLKYVHSA 164
+K ND+ + E + DL + + + L + + L + L+Y+H
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 165 SVLHRDLKPSNLLLNASCDL---KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
++HRDLKP N++L KI D G A+ + + TE+V T Y APELL +
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ-KK 199
Query: 222 YTAAIDIWSVGCILGEIMTR-EPLFP 246
YT +D WS G + E +T P P
Sbjct: 200 YTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 21/175 (12%)
Query: 86 RRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY-IVYELMDT-DLHQIIRSDQQLT 143
+R RE+ + H+N++++ D+ D +D Y +V E ++ L + I S L+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDV------DEEDDCYYLVMEYIEGPTLSEYIESHGPLS 109
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF-MT 202
D F Q+L G+K+ H ++HRD+KP N+L++++ LKI DFG+A+ SET T
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169
Query: 203 EYVV-TRWYRAPELLLN-----CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 251
+V+ T Y +PE CT DI+S+G +L E++ EP F G+ V
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECT------DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 42 KYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLL 95
+++ IR +G G +G V C T E+VA+K + + ++I D ++ EI++L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK---EIEIL 77
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY-FLYQ 153
R++ HEN++ K I +D N + ++ E + + L + + ++ + Q + Q
Sbjct: 78 RNLYHENIVKYKGICT---EDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ 134
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV------T 207
+ +G+ Y+ S +HRDL N+L+ + +KIGDFGL + ETD V
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPV 193
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
WY APE L+ Y A+ D+WS G L E++T + D + L ++IG P
Sbjct: 194 FWY-APECLMQSKFYIAS-DVWSFGVTLHELLT----YCDSD-SSPMALFLKMIG-PTHG 245
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVE 322
+ R N + ++LP C PN L+ K F P+ R + +
Sbjct: 246 QMTVTRLVNTLKEGKRLP-CP--------PNCPDEVYQLMRKCWEFQPSNRTSFQ 291
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 42 KYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLL 95
+++ IR +G G +G V C T E+VA+K + + ++I D ++ EI++L
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK---EIEIL 65
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQY-FLYQ 153
R++ HEN++ K I +D N + ++ E + + L + + ++ + Q + Q
Sbjct: 66 RNLYHENIVKYKGIC---TEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ 122
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV------T 207
+ +G+ Y+ S +HRDL N+L+ + +KIGDFGL + ETD V
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPV 181
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDA 267
WY APE L+ Y A+ D+WS G L E++T + D + L ++IG P
Sbjct: 182 FWY-APECLMQSKFYIAS-DVWSFGVTLHELLT----YCDSD-SSPMALFLKMIG-PTHG 233
Query: 268 SLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVE 322
+ R N + ++LP C PN L+ K F P+ R + +
Sbjct: 234 QMTVTRLVNTLKEGKRLP-CP--------PNCPDEVYQLMRKCWEFQPSNRTSFQ 279
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNII---DARRTLREIKLLRHMEHENVIAI 106
+G+G++G V A +T + AIK + D ++ D T+ E ++L +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKK--DVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
K++ F +++ L DL I+S + ++ +++ GL+++HS +
Sbjct: 84 MFCTFQTKENLF---FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 140
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTEYTAA 225
++RDLK N+LL+ +KI DFG+ + D T E+ T Y APE+LL +Y +
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHS 199
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D WS G +L E++ + F G+D EL S +R DN
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQDE-------EELFHS--------IRMDNP-------- 236
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR-HPYLQSLH 334
F R+ K A DLL K+ V +P KR+ V +R HP + ++
Sbjct: 237 ------FYPRWLEKE--AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 80
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 81 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 136 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 194
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 195 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 237
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 238 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 286
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 287 QSTKVPQTPL 296
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 146/341 (42%), Gaps = 67/341 (19%)
Query: 19 GVLTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNA 78
G G ++ N + ++V+S+ +G G G V N T+E+ A+K +
Sbjct: 1 GSHVKSGLQIKKNAIIDDYKVTSQV------LGLGINGKVLQIFNKRTQEKFALKMLQ-- 52
Query: 79 FDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY-------IVYELMDT- 130
D + RE++L H I I+ D + ++Y IV E +D
Sbjct: 53 -----DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLYAGRKCLLIVMECLDGG 100
Query: 131 DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA---SCDLK 185
+L I R DQ T+ + + ++Y+HS ++ HRD+KP NLL + + LK
Sbjct: 101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
Query: 186 IGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 245
+ DFG A+ T+ + +T T +Y APE +L +Y + D+WS+G I+ ++ P F
Sbjct: 161 LTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Query: 246 PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVD 305
H L + SP + R R Q+ FPN V
Sbjct: 220 YSN---HGLAI------SPGMKT-----------------RIRMGQY--EFPNPEWSEVS 251
Query: 306 -----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 341
L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 81
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 82 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 137 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 195
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 196 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 238
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 239 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 287
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 288 QSTKVPQTPL 297
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 40/288 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIA 105
+RP+G+G +G V A + + +A+K + + + + REI++ H+ H N++
Sbjct: 19 VRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 106 IKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ + K+ +Y++ E +L++ ++ + + F+ +L L Y H
Sbjct: 79 MYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTA 224
V+HRD+KP NLL+ +LKI DFG + + + T Y PE++ T +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDE 191
Query: 225 AIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQL 284
+D+W G + E + P F + R I + L F
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------NVDLKFP------------ 232
Query: 285 PRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
P S G+ DL+ K+L + P +R+ ++ + HP++++
Sbjct: 233 ------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 82
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 83 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 138 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 196
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 197 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 239
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 240 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 288
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 289 QSTKVPQTPL 298
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 90
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 91 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 146 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 204
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 205 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 247
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 248 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 296
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 297 QSTKVPQTPL 306
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 75
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 76 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 131 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 189
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 190 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 232
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 233 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 281
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 282 QSTKVPQTPL 291
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 74
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 75 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 188
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 231
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 232 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 281 QSTKVPQTPL 290
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 76
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 77 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 190
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 233
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 234 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 283 QSTKVPQTPL 292
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 48/289 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN--AF-DNIIDARRTLREIKLLRHMEHENVIAI 106
+G GA+ V T + A+K I AF D+ ++ EI +L+ ++HEN++ +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-----NEIAVLKKIKHENIVTL 71
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+DI ++ Y+V +L+ +L I T+ + Q+L +KY+H
Sbjct: 72 EDIY-----ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 166 VLHRDLKPSNLLL---NASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
++HRDLKP NLL + + I DFGL++ + M+ T Y APE+L Y
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQ-KPY 184
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ A+D WS+G I ++ P F + I E G+
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE----------GYY---------- 224
Query: 283 QLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+F + F + S A D + +L DPN+R T E+AL HP++
Sbjct: 225 --------EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 64/303 (21%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
+ ++ D+W++GCI+ +++ P F G + + ++I L D
Sbjct: 208 EKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-------------LEYDF 253
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHPYL 330
++ P+ R DL+EK+LV D KR+ EE HP+
Sbjct: 254 PEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 331 QSL 333
+S+
Sbjct: 295 ESV 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 120
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 121 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 234
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 277
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 278 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 327 QSTKVPQTPL 336
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 68/305 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKL---------LRHMEH 100
+G G++ V A T E AIK I++ R ++E K+ + ++H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK--------ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ + + +K F Y + +L + IR + +++ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLART---TSETDFMTEYVVTRWYRAPELLL 217
+H ++HRDLKP N+LLN ++I DFG A+ S+ +V T Y +PELL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 218 NCTEYTA--AIDIWSVGCILGEIMTREPLF-PGKDYVHQLRLITELIGSPDDASLGFLRS 274
TE +A + D+W++GCI+ +++ P F G + + ++I L
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-------------LEY 251
Query: 275 DNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEA------LRHP 328
D ++ P+ R DL+EK+LV D KR+ EE HP
Sbjct: 252 DFPEKF---FPKAR----------------DLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292
Query: 329 YLQSL 333
+ +S+
Sbjct: 293 FFESV 297
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVEL--HWRASQCPHIVRI 126
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + + ++
Sbjct: 127 V-----DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 182 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 240
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D+WS+G I+ ++ P F H L + SP +
Sbjct: 241 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT-------- 283
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R+T+ E + HP++
Sbjct: 284 ---------RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 332
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 333 QSTKVPQTPL 342
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 143/334 (42%), Gaps = 62/334 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLRHMEHENVIA 105
IR +G G +G V + + ++ A+K + NI R+ + E +L+ ++++++
Sbjct: 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVV----RNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQ--QLTDDHCQYFLYQLLRGLKYVHS 163
+ K ++ + +++E + L++II + + + + ++L+ L Y+
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155
Query: 164 ASVLHRDLKPSNLLLN-------------------------ASCDLKIGDFGLARTTSET 198
S+ H DLKP N+LL+ S +K+ DFG A T ++
Sbjct: 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA--TFKS 213
Query: 199 DFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLIT 258
D+ + TR YRAPE++LN + + D+WS GC+L E+ T LF +++ L ++
Sbjct: 214 DYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272
Query: 259 ELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGA--------------- 303
+I L N +YV K + +P +S
Sbjct: 273 SIIQPIPKNMLYEATKTNGSKYV------NKDELKLAWPENASSINSIKHVKKCLPLYKI 326
Query: 304 ------VDLLEKMLVFDPNKRITVEEALRHPYLQ 331
D L +L DP R + E L+H +L+
Sbjct: 327 IKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 39/284 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+GA G V A++ T +EVAI+++ + EI ++R ++ N++ D
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
+++++V E + + ++ + + + L+ L+++HS V+HR
Sbjct: 86 YL-----VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 170 DLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 228
D+K N+LL +K+ DFG A+ T E + V T ++ APE++ Y +DI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPKVDI 199
Query: 229 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 288
WS+G + E++ EP + ++ + L LI G+P+
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE----------------------- 235
Query: 289 KQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ P K S D L + L D KR + +E L+H +L+
Sbjct: 236 -----LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 47 IRPIGRGAYG---IVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENV 103
++ +G+G++G +V ++ A+K + A + D RT E +L + H V
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T +Y++ + + DL + + T++ +++L +L GL ++H
Sbjct: 93 VKLHYAFQ-----TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCTE 221
S +++RDLKP N+LL+ +K+ DFGL++ + + + T Y APE ++N
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-VVNRQG 206
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL-IGSPDDASLGFLRSDNARRY 280
++ + D WS G ++ E++T F GKD + LI + +G P FL S A+
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ-----FL-STEAQSL 260
Query: 281 VRQLPRCRKQQFATRFPNKSSGAVDL 306
+R L K+ A R + GA ++
Sbjct: 261 LRAL---FKRNPANRLGSGPDGAEEI 283
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 40/287 (13%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
RP+G+G +G V A + + +A+K + + + + REI++ H+ H N++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ K+ +Y++ E +L++ ++ + + F+ +L L Y H
Sbjct: 80 YNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
V+HRD+KP NLL+ +LKI DFG + + + T Y PE++ T +
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEK 192
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+W G + E + P F + R I + L F
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------NVDLKFP------------- 232
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
P S G+ DL+ K+L + P +R+ ++ + HP++++
Sbjct: 233 -----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 50/295 (16%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G GA+G V A N ET A K I + + + EI +L +H N++ +
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKL 99
Query: 107 KDIIRPPKKDTFNDVYIVYEL-----MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
D N+++I+ E +D + ++ R LT+ Q Q L L Y+
Sbjct: 100 LDAFYYE-----NNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYL 151
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCT 220
H ++HRDLK N+L D+K+ DFG+ A+ T ++ T ++ APE+++ T
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 221 E----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
Y D+WS+G L E+ EP H+L N
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------N 244
Query: 277 ARRYVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
R + ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 245 PMRVLLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 40/287 (13%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
RP+G+G +G V A + + +A+K + + + + REI++ H+ H N++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 107 KDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ K+ +Y++ E +L++ ++ + + F+ +L L Y H
Sbjct: 81 YNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAA 225
V+HRD+KP NLL+ +LKI DFG + + + T Y PE++ T +
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEK 193
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D+W G + E + P F + R I + L F
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-------NVDLKFP------------- 233
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
P S G+ DL+ K+L + P +R+ ++ + HP++++
Sbjct: 234 -----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 269
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 50/295 (16%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G GA+G V A N ET A K I + + + EI +L +H N++ +
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKL 99
Query: 107 KDIIRPPKKDTFNDVYIVYEL-----MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
D N+++I+ E +D + ++ R LT+ Q Q L L Y+
Sbjct: 100 LDAFYYE-----NNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYL 151
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCT 220
H ++HRDLK N+L D+K+ DFG+ A+ T ++ T ++ APE+++ T
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 221 E----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
Y D+WS+G L E+ EP H+L N
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------N 244
Query: 277 ARRYVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
R + ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 245 PMRVLLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 50/295 (16%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I +G GA+G V A N ET A K I + + + EI +L +H N++ +
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKL 99
Query: 107 KDIIRPPKKDTFNDVYIVYEL-----MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
D N+++I+ E +D + ++ R LT+ Q Q L L Y+
Sbjct: 100 LDAFYYE-----NNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYL 151
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCT 220
H ++HRDLK N+L D+K+ DFG+ A+ T ++ T ++ APE+++ T
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 221 E----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
Y D+WS+G L E+ EP H+L N
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPH------HEL---------------------N 244
Query: 277 ARRYVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
R + ++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 245 PMRVLLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDA-RRTLREIKLLRHMEHENVIA 105
+R IG G++G V A + E VAIKK+ + + + ++E++ L+ + H N I
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 106 IKDI-IRPPKKDTFNDVYIVYEL---MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ +R + ++V E +DL ++ + + L + + L+GL Y+
Sbjct: 119 YRGCYLRE------HTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYL 170
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
HS +++HRD+K N+LL+ +K+GDFG A + + +V T ++ APE++L E
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMDE 227
Query: 222 --YTAAIDIWSVGCILGEIMTREP 243
Y +D+WS+G E+ R+P
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKP 251
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 39/284 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+GA G V A++ T +EVAI+++ + EI ++R ++ N++ D
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
+++++V E + + ++ + + + L+ L+++HS V+HR
Sbjct: 86 YL-----VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 170 DLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 228
D+K N+LL +K+ DFG A+ T E + V T ++ APE++ Y +DI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 199
Query: 229 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 288
WS+G + E++ EP + ++ + L LI G+P+
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE----------------------- 235
Query: 289 KQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ P K S D L + L D KR + +E L+H +L+
Sbjct: 236 -----LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 42 KYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARR-TLREIKLLRHMEH 100
K +R IG G++G V A + E VAIKK+ + + + ++E++ L+ + H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 101 ENVIAIKDI-IRPPKKDTFNDVYIVYEL---MDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
N I + +R + ++V E +DL ++ + + L + + L+
Sbjct: 75 PNTIQYRGCYLRE------HTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQ 126
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
GL Y+HS +++HRD+K N+LL+ +K+GDFG A + + +V T ++ APE++
Sbjct: 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVI 183
Query: 217 LNCTE--YTAAIDIWSVGCILGEIMTREP 243
L E Y +D+WS+G E+ R+P
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKI-GNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G++ V A + T EVAIK I A +R E+K+ ++H +++ + +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 109 IIRPPKKDTFNDVYIVYELM-DTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASV 166
N VY+V E+ + ++++ +++ + +++ ++F++Q++ G+ Y+HS +
Sbjct: 79 YFEDS-----NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRAPELLLNCTEYTA 224
LHRDL SNLLL + ++KI DFGLA T + Y + T Y +PE+ + +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLA-TQLKMPHEKHYTLCGTPNYISPEIATR-SAHGL 191
Query: 225 AIDIWSVGCILGEIMTREPLF 245
D+WS+GC+ ++ P F
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPF 212
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNII---DARRTLREIKLLRHMEHENVIAI 106
+G+G++G V A +T + AIK + D ++ D T+ E ++L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKK--DVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
K++ F +++ L DL I+S + ++ +++ GL+++HS +
Sbjct: 83 MFCTFQTKENLF---FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCTEYTAA 225
++RDLK N+LL+ +KI DFG+ + D T + T Y APE+LL +Y +
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHS 198
Query: 226 IDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLP 285
+D WS G +L E++ + F G+D EL S +R DN
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDE-------EELFHS--------IRMDNP-------- 235
Query: 286 RCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALR-HPYLQSLH 334
F R+ K A DLL K+ V +P KR+ V +R HP + ++
Sbjct: 236 ------FYPRWLEKE--AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLRHMEHENVIA 105
+R IG+G++G VC ++T++ A+K + + R +E+++++ +EH ++
Sbjct: 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 106 IKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ + + D+++V +L+ DL ++ + ++ + F+ +L+ L Y+ +
Sbjct: 80 LWYSFQDEE-----DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN--CTEY 222
++HRD+KP N+LL+ + I DF +A +T T+ Y APE+ + Y
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 223 TAAIDIWSVGCILGEIM 239
+ A+D WS+G E++
Sbjct: 195 SFAVDWWSLGVTAYELL 211
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 54/303 (17%)
Query: 43 YVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR------ 96
Y+ + +GRG + +V ++ T +E A K + L EI +L
Sbjct: 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89
Query: 97 -----HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFL 151
H +EN I I+ ++ L +L +++ +++ +
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGGE------IFSLCLPELAEMV------SENDVIRLI 137
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLARTTSETDFMTEYVVTR 208
Q+L G+ Y+H +++H DLKP N+LL++ D+KI DFG++R + E + T
Sbjct: 138 KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 268
Y APE+L N T A D+W++G I ++T F G+D
Sbjct: 198 EYLAPEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFVGED------------------- 237
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
N Y+ + + F + S A D ++ +LV +P KR T E L H
Sbjct: 238 -------NQETYLN-ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289
Query: 329 YLQ 331
+LQ
Sbjct: 290 WLQ 292
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 39/284 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+GA G V A++ T +EVAI+++ + EI ++R ++ N++ D
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
+++++V E + + ++ + + + L+ L+++HS V+HR
Sbjct: 87 YL-----VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 170 DLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 228
D+K N+LL +K+ DFG A+ T E + V T ++ APE++ Y +DI
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPKVDI 200
Query: 229 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 288
WS+G + E++ EP + ++ + L LI G+P+
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE----------------------- 236
Query: 289 KQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ P K S D L + L D KR + +E ++H +L+
Sbjct: 237 -----LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA---- 105
IG GA +V AA + +E+VAIK+I N L+EI+ + H N+++
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 106 --IKDIIRPPKKDTFNDVYIVYELM------DTDLHQIIRSDQQ---LTDDHCQYFLYQL 154
+KD ++++V +L+ D H + + + + L + L ++
Sbjct: 77 FVVKD-----------ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE------YVVTR 208
L GL+Y+H +HRD+K N+LL ++I DFG++ + +T +V T
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 268
+ APE++ Y DIWS G E+ T P Y L+ L P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDPPSLE 243
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
G + ++Y + + ++ L DP KR T E LRH
Sbjct: 244 TGVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAAELLRHK 284
Query: 329 YLQ 331
+ Q
Sbjct: 285 FFQ 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA---- 105
IG GA +V AA + +E+VAIK+I N L+EI+ + H N+++
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 106 --IKDIIRPPKKDTFNDVYIVYELM------DTDLHQIIRSDQQ---LTDDHCQYFLYQL 154
+KD ++++V +L+ D H + + + + L + L ++
Sbjct: 82 FVVKD-----------ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE------YVVTR 208
L GL+Y+H +HRD+K N+LL ++I DFG++ + +T +V T
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 268
+ APE++ Y DIWS G E+ T P Y L+ L P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDPPSLE 248
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
G + ++Y + + ++ L DP KR T E LRH
Sbjct: 249 TGVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAAELLRHK 289
Query: 329 YLQ 331
+ Q
Sbjct: 290 FFQ 292
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ IG G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFND---VYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y+V E M D+ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +K+ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ IG G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFND---VYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y+V E M D+ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +K+ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 47 IRPIGRGAYGIVC---AAVNSETREEVAIKKIGNAF--DNIIDARRTLREIKLLRHMEHE 101
+R +G+G YG V + T + A+K + A N D T E +L ++H
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
++ D+I + T +Y++ E L +L + + +D ++L ++ L +
Sbjct: 82 FIV---DLIYAFQ--TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNC 219
+H +++RDLKP N++LN +K+ DFGL + + +T + T Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR- 195
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKD 249
+ + A+D WS+G ++ +++T P F G++
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 47 IRPIGRGAYGIVC---AAVNSETREEVAIKKIGNAF--DNIIDARRTLREIKLLRHMEHE 101
+R +G+G YG V + T + A+K + A N D T E +L ++H
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
++ D+I + T +Y++ E L +L + + +D ++L ++ L +
Sbjct: 82 FIV---DLIYAFQ--TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNC 219
+H +++RDLKP N++LN +K+ DFGL + + +T + T Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR- 195
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKD 249
+ + A+D WS+G ++ +++T P F G++
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT-LREIKLLRHMEHENVIAIKD 108
+G+G +G + ET E + +K++ FD + +RT L+E+K++R +EH NV+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIR-FDE--ETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 109 IIRPPKKDTFNDVYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
++ K+ F YI L II+S D Q F + G+ Y+HS +++
Sbjct: 75 VLYKDKRLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLA-------------RTTSETDFMTEYVVTR--WYRA 212
HRDL N L+ + ++ + DFGLA R+ + D Y V ++ A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMTR 241
PE ++N Y +D++S G +L EI+ R
Sbjct: 191 PE-MINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA-VNSETREE--VAIKKIGNAFDNIIDARRTLREIKL 94
E+ YV IG G +G VC + + ++E VAIK + + R L E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 70
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD-LHQIIR-SDQQLTDDHCQYFLY 152
+ EH N+I ++ ++ V I+ E M+ L +R +D Q T L
Sbjct: 71 MGQFEHPNIIRLEGVV-----TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 125
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR-------TTSETDFMTEYV 205
+ G++Y+ S +HRDL N+L+N++ K+ DFGL+R +ET + +
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW APE + ++T+A D WS G ++ E+M+
Sbjct: 186 PIRWT-APEAIA-FRKFTSASDAWSYGIVMWEVMS 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 39/284 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+GA G V A++ T +EVAI+++ + EI ++R ++ N++ D
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLD- 85
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
+++++V E + + ++ + + + L+ L+++HS V+HR
Sbjct: 86 ----SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 170 DLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDI 228
++K N+LL +K+ DFG A+ T E + V T ++ APE++ Y +DI
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 200
Query: 229 WSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCR 288
WS+G + E++ EP + ++ + L LI G+P+
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE----------------------- 236
Query: 289 KQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ P K S D L + L D KR + +E ++H +L+
Sbjct: 237 -----LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIID---------ARRT 88
E S KY + P+G GA+G V AV+ E +EV +K I + +++ + T
Sbjct: 21 EYSQKY-STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKK--EKVLEDCWIEDPKLGKVT 77
Query: 89 LREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQ 148
L EI +L +EH N+I + DI + F + + DL I +L +
Sbjct: 78 L-EIAILSRVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 208
Y QL+ + Y+ ++HRD+K N+++ +K+ DFG A + T
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTI 193
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 245
Y APE+L+ +++WS+G L ++ E F
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 56/328 (17%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
G+L + K + +GRGA+G+VC A ++VAIK+I ++ + + + E++
Sbjct: 1 GSLHMIDYKEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELR 54
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQL---TDDHCQY 149
L + H N++ + N V +V E + L+ ++ + L T H
Sbjct: 55 QLSRVNHPNIVKLYGA-------CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 150 FLYQLLRGLKYVHS---ASVLHRDLKPSNLLLNASCD-LKIGDFGLARTTSETDFMTEYV 205
+ Q +G+ Y+HS +++HRDLKP NLLL A LKI DFG A MT
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNK 165
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPD 265
+ + APE+ + Y+ D++S G IL E++TR F + IG P
Sbjct: 166 GSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPA 211
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEAL 325
+ + + ++ LP+ P +S L+ + DP++R ++EE +
Sbjct: 212 FRIMWAVHNGTRPPLIKNLPK----------PIES-----LMTRCWSKDPSQRPSMEEIV 256
Query: 326 RHPYLQSLHDLNDEPVCPRPFHFDFEHS 353
+ H + P P + +HS
Sbjct: 257 K----IMTHLMRYFPGADEPLQYPCQHS 280
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKD 108
+G GA+ V +N T +E A+K I +I R RE+++L + H NV+ + +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQGHRNVLELIE 78
Query: 109 IIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
++D F Y+V+E M + I + + + + L ++H+ +
Sbjct: 79 FFE--EEDRF---YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 168 HRDLKPSNLLL---NASCDLKIGDFGLARTTS--------ETDFMTEYVVTRWYRAPELL 216
HRDLKP N+L N +KI DFGL T + + Y APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 217 LNCTE----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFL 272
+E Y D+WS+G IL +++ P F G+ GS G+
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR------------CGS----DCGWD 237
Query: 273 RSDNARRYVRQLPRCRKQQFAT------RFPNK-----SSGAVDLLEKMLVFDPNKRITV 321
R + P C+ F + FP+K S A DL+ K+LV D +R++
Sbjct: 238 RGEAC-------PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290
Query: 322 EEALRHPYLQSLHDLNDEPV 341
+ L+HP++Q N P
Sbjct: 291 AQVLQHPWVQGCAPENTLPT 310
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA-VNSETREE--VAIKKIGNAFDNIIDARRTLREIKL 94
E+ YV IG G +G VC + + ++E VAIK + + R L E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 68
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD-LHQIIR-SDQQLTDDHCQYFLY 152
+ EH N+I ++ ++ V I+ E M+ L +R +D Q T L
Sbjct: 69 MGQFEHPNIIRLEGVV-----TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 123
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSE-------TDFMTEYV 205
+ G++Y+ S +HRDL N+L+N++ K+ DFGL+R E T + +
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW APE + ++T+A D WS G ++ E+M+
Sbjct: 184 PIRW-TAPEAIA-FRKFTSASDAWSYGIVMWEVMS 216
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 69/339 (20%)
Query: 22 THGGKYVQYNVYGNL--FEVSSK-YVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNA 78
+ GGK + + N+ FE S K V + +G G+ G V + + R VA+K++
Sbjct: 10 SRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLID 68
Query: 79 FDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIR 137
F +I L EIKLL + H NVI D F +YI EL + +L ++
Sbjct: 69 FCDI-----ALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELCNLNLQDLVE 118
Query: 138 SDQQLTDDHCQY--------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLK---- 185
S + ++D++ + L Q+ G+ ++HS ++HRDLKP N+L++ S
Sbjct: 119 S-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ 177
Query: 186 ---------IGDFGLART--TSETDF---MTEYVVTRWYRAPELLLNCTE--YTAAIDIW 229
I DFGL + + + F + T +RAPELL T+ T +IDI+
Sbjct: 178 TGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
Query: 230 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 289
S+GC+ I+++ G Y + +I + SL ++ + R + +
Sbjct: 238 SMGCVFYYILSKGKHPFGDKYSRESNIIRGIF------SLDEMKCLHDRSLIAE------ 285
Query: 290 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
A DL+ +M+ DP KR T + LRHP
Sbjct: 286 -------------ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 56/312 (17%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+GRGA+G+VC A ++VAIK+I ++ + + + E++ L + H N++ +
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 110 IRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQL---TDDHCQYFLYQLLRGLKYVHS-- 163
N V +V E + L+ ++ + L T H + Q +G+ Y+HS
Sbjct: 70 -------CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 164 -ASVLHRDLKPSNLLLNASCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTE 221
+++HRDLKP NLLL A LKI DFG A MT + + APE+ +
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG-SN 179
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y+ D++S G IL E++TR F + IG P + + + +
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPAFRIMWAVHNGTRPPLI 226
Query: 282 RQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 341
+ LP+ P +S L+ + DP++R ++EE ++ H + P
Sbjct: 227 KNLPK----------PIES-----LMTRCWSKDPSQRPSMEEIVK----IMTHLMRYFPG 267
Query: 342 CPRPFHFDFEHS 353
P + +HS
Sbjct: 268 ADEPLQYPCQHS 279
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG+G++G V +++ T++ VAIK I + + + +EI +L + V
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHR 169
K ++I+ E + + + L ++L+GL Y+HS +HR
Sbjct: 90 YLKGSK-----LWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 170 DLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAAIDI 228
D+K +N+LL+ D+K+ DFG+A ++T +V T ++ APE ++ + Y + DI
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIQQSAYDSKADI 203
Query: 229 WSVGCILGEIMTREPLFPGKDYVHQLRLI 257
WS+G E+ EP P D +H +R++
Sbjct: 204 WSLGITAIELAKGEP--PNSD-MHPMRVL 229
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 69/339 (20%)
Query: 22 THGGKYVQYNVYGNL--FEVSSK-YVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNA 78
+ GGK + + N+ FE S K V + +G G+ G V + + R VA+K++
Sbjct: 10 SRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLID 68
Query: 79 FDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIR 137
F +I L EIKLL + H NVI D F +YI EL + +L ++
Sbjct: 69 FCDI-----ALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELCNLNLQDLVE 118
Query: 138 SDQQLTDDHCQY--------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLK---- 185
S + ++D++ + L Q+ G+ ++HS ++HRDLKP N+L++ S
Sbjct: 119 S-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ 177
Query: 186 ---------IGDFGLART--TSETDF---MTEYVVTRWYRAPELLLNCTE--YTAAIDIW 229
I DFGL + + + F + T +RAPELL T+ T +IDI+
Sbjct: 178 TGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
Query: 230 SVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRK 289
S+GC+ I+++ G Y + +I + SL ++ + R + +
Sbjct: 238 SMGCVFYYILSKGKHPFGDKYSRESNIIRGIF------SLDEMKCLHDRSLIAE------ 285
Query: 290 QQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
A DL+ +M+ DP KR T + LRHP
Sbjct: 286 -------------ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 48/306 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKD 108
+G GAY V AV+ + +E A+K I + R RE++ L + ++N++ +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH--SRSRVFREVETLYQCQGNKNIL---E 75
Query: 109 IIRPPKKDTFNDVYIVYE-LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+I + DT Y+V+E L + I+ + + + + L ++H+ +
Sbjct: 76 LIEFFEDDT--RFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIA 133
Query: 168 HRDLKPSNLLLNAS--------CDLKIGDFGLARTTSETDFMTEYVVT----RWYRAPEL 215
HRDLKP N+L + CD +G G+ S T T + T Y APE+
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGS-GMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 216 LL----NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGF 271
+ T Y D+WS+G +L +++ P F G A G+
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH----------------CGADCGW 236
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNK-----SSGAVDLLEKMLVFDPNKRITVEEALR 326
R + R +L Q+ FP+K SS A DL+ K+LV D +R++ + L+
Sbjct: 237 DRGEVCRVCQNKLFE-SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 327 HPYLQS 332
HP++Q
Sbjct: 296 HPWVQG 301
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE-NVIA 105
IR +G G++G V + ET A+K I+D ++ ++ L+ +EH N
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK----LKQIEHTLNEKR 94
Query: 106 IKDIIRPPK--------KDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
I+ + P KD N +Y+V E ++ +R + ++ H +++ Q++
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSN-LYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
+Y+HS +++RDLKP NLL++ +K+ DFG A+ + T Y APE++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEII 211
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLF 245
L Y A+D W++G ++ E+ P F
Sbjct: 212 L-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 129/310 (41%), Gaps = 61/310 (19%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G G V N T+E+ A+K + D + RE++L H I I
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQ-------DCPKARREVEL--HWRASQCPHIVRI 120
Query: 110 IRPPKKDTFNDVY-------IVYELMDT-DLHQII--RSDQQLTDDHCQYFLYQLLRGLK 159
+ D + ++Y IV E +D +L I R DQ T+ + ++
Sbjct: 121 V-----DVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 160 YVHSASVLHRDLKPSNLLLNA---SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL 216
Y+HS ++ HRD+KP NLL + + LK+ DFG A+ T+ + +T T +Y APE +
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-V 234
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDN 276
L +Y + D WS+G I ++ P F H L + SP +
Sbjct: 235 LGPEKYDKSCDXWSLGVIXYILLCGYPPFYSN---HGLAI------SPGXKT-------- 277
Query: 277 ARRYVRQLPRCRKQQFATRFPNKSSGAVD-----LLEKMLVFDPNKRITVEEALRHPYLQ 331
R R Q+ FPN V L+ +L +P +R T+ E HP++
Sbjct: 278 ---------RIRXGQY--EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIX 326
Query: 332 SLHDLNDEPV 341
+ P+
Sbjct: 327 QSTKVPQTPL 336
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ IG G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +K+ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGLAR E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 48 RPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ +G G +G V A N T+ V K G+ + L E +++ ++H+ ++ +
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKL 75
Query: 107 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQY--FLYQLLRGLKYVHS 163
++ T +YI+ E M L ++SD+ + F Q+ G+ ++
Sbjct: 76 HAVV------TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 164 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLLNCT 220
+ +HRDL+ +N+L++AS KI DFGLAR + ++ +W APE +N
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE-AINFG 187
Query: 221 EYTAAIDIWSVGCILGEIMT--REPLFPG 247
+T D+WS G +L EI+T R P +PG
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIP-YPG 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 33/214 (15%)
Query: 48 RPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ +G G +G V A N T+ V K G+ + L E +++ ++H+ ++ +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKL 248
Query: 107 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGL 158
++ T +YI+ E M L ++SD+ +L D F Q+ G+
Sbjct: 249 HAVV------TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGM 297
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPEL 215
++ + +HRDL+ +N+L++AS KI DFGLAR + ++ +W APE
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE- 355
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
+N +T D+WS G +L EI+T R P +PG
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIP-YPG 388
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 42 KYVPPIRPIGRGAYGIVCA----AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRH 97
+Y+ IR +G G +G V N T E VA+K + + + REI++LR
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ-REIEILRT 67
Query: 98 MEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHC----QYFLY- 152
+ HE+++ K + + V +V E + + S + HC Q L+
Sbjct: 68 LYHEHIVKYKGCCEDQGEKS---VQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFA 118
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ G+ Y+H+ +HR L N+LL+ +KIGDFGLA+ E EY R
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDG 175
Query: 209 -----WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L C Y A+ D+WS G L E++T
Sbjct: 176 DSPVFWY-APECLKECKFYYAS-DVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 41 SKYVPPIRPIGRGAYGIVCA----AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+Y+ IR +G G +G V N T E VA+K + + + REI++LR
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ-REIEILR 65
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHC----QYFLY 152
+ HE+++ K + + V +V E + + S + HC Q L+
Sbjct: 66 TLYHEHIVKYKGCCEDQGEKS---VQLVMEYVP------LGSLRDYLPRHCVGLAQLLLF 116
Query: 153 --QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR-- 208
Q+ G+ Y+H+ +HR L N+LL+ +KIGDFGLA+ E EY R
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVRED 173
Query: 209 ------WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L C Y A+ D+WS G L E++T
Sbjct: 174 GDSPVFWY-APECLKECKFYYAS-DVWSFGVTLYELLT 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG+G++G V +++ T++ VAIK I + + + +EI +L + V
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
KDT ++I+ E + + L + L ++L+GL Y+HS
Sbjct: 86 YGSYL---KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+K +N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y +
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSK 199
Query: 226 IDIWSVGCILGEIMTREP 243
DIWS+G E+ EP
Sbjct: 200 ADIWSLGITAIELARGEP 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARR-TLREIKLLRHMEHENVIAI 106
R +G+G +G VCA T + A KK+ L E ++L + V+++
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
KD V + D H + ++ ++ GL+ +H +
Sbjct: 250 AYAYE--TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
++RDLKP N+LL+ ++I D GLA E + V T Y APE++ N YT +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN-ERYTFSP 366
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
D W++GC+L E++ + SP ++ + R V+++P
Sbjct: 367 DWWALGCLLYEMIAGQ--------------------SPFQQRKKKIKREEVERLVKEVP- 405
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRI-----TVEEALRHPYLQSLH 334
++++ RF S A L ++L DP +R+ + E HP + L+
Sbjct: 406 ---EEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 35/241 (14%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI- 104
PI+ +GRG +G+V A N AIK+I + + + +RE+K L +EH ++
Sbjct: 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 105 --------AIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH----CQYFLY 152
+ ++P + +YI +L + + + + ++ C +
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVY--LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD------------- 199
Q+ ++++HS ++HRDLKPSN+ +K+GDFGL + +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 200 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 259
T V T+ Y +PE ++ Y+ +DI+S+G IL E+ L+P + ++R +T+
Sbjct: 186 RHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLTD 239
Query: 260 L 260
+
Sbjct: 240 V 240
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 112 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL R E + T + RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 224
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 109
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 110 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 222
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 223 RKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 48 RPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 104
+ +G G +G VC+ + S+ VAIK + + R L E ++ +H N+I
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNII 80
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVH 162
++ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 81 RLEGVVTKSKP-----VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLL 217
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA 194
Query: 218 NCTEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 195 -YRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+G G +G VC+ + S+ VAIK + + R L E ++ +H N+I +
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 99
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 100 EGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLLNC 219
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA-Y 212
Query: 220 TEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 213 RKFTSASDVWSYGIVLWEVMS 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG+G++G V +++ T++ VAIK I + + + +EI +L + V
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
KDT ++I+ E + + L + L ++L+GL Y+HS
Sbjct: 91 YGSYL---KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+K +N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y +
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSK 204
Query: 226 IDIWSVGCILGEIMTREP 243
DIWS+G E+ EP
Sbjct: 205 ADIWSLGITAIELARGEP 222
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG+G++G V +++ T++ VAIK I + + + +EI +L + V
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
KDT ++I+ E + + L + L ++L+GL Y+HS
Sbjct: 71 YGSYL---KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+K +N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSK 184
Query: 226 IDIWSVGCILGEIMTREP 243
DIWS+G E+ EP
Sbjct: 185 ADIWSLGITAIELARGEP 202
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 50 IGRGAYGIVCAA-VNSETREE--VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IG G +G VC+ + + E VAIK + + + R L E ++ +H NVI +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVIHL 99
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K T V I+ E M+ L +R +D Q T L + G+KY+
Sbjct: 100 EGVV---TKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLAR----TTSE---TDFMTEYVVTRWYRAPELLL 217
+ +HRDL N+L+N++ K+ DFGL+R TS+ T + + RW APE +
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AI 212
Query: 218 NCTEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G ++ E+M+
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 48 RPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 104
+ +G G +G VC+ + S+ VAIK + + R L E ++ +H N+I
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNII 80
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVH 162
++ ++ K V IV E M+ L +R D Q T L + G+KY+
Sbjct: 81 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRWYRAPELLL 217
+HRDL N+L+N++ K+ DFGL+R E + T + RW +PE +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIA 194
Query: 218 NCTEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G +L E+M+
Sbjct: 195 -YRKFTSASDVWSYGIVLWEVMS 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ IG+G++G V +++ T++ VAIK I + + + +EI +L + V
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
KDT ++I+ E + + L + L ++L+GL Y+HS
Sbjct: 71 YGSYL---KDT--KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM-TEYVVTRWYRAPELLLNCTEYTAA 225
+HRD+K +N+LL+ ++K+ DFG+A ++T +V T ++ APE ++ + Y +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSK 184
Query: 226 IDIWSVGCILGEIMTREP 243
DIWS+G E+ EP
Sbjct: 185 ADIWSLGITAIELARGEP 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 51/290 (17%)
Query: 53 GAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRP 112
G +G V A N ET A K I + + + EI +L +H N++ + D
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 113 PKKDTFNDVYIVYEL-----MDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
N+++I+ E +D + ++ R LT+ Q Q L L Y+H ++
Sbjct: 79 E-----NNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKII 130
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCTE---- 221
HRDLK N+L D+K+ DFG++ + T ++ T ++ APE+++ T
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 222 YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYV 281
Y D+WS+G L E+ EP H+L N R +
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPPH------HEL---------------------NPMRVL 223
Query: 282 RQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
++ + A P++ SS D L+K L + + R T + L+HP++
Sbjct: 224 LKIAKSEPPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARR-TLREIKLLRHMEHENVIAI 106
R +G+G +G VCA T + A KK+ L E ++L + V+++
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
KD V + D H + ++ ++ GL+ +H +
Sbjct: 250 AYAYE--TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
++RDLKP N+LL+ ++I D GLA E + V T Y APE++ N YT +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN-ERYTFSP 366
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
D W++GC+L E++ + SP ++ + R V+++P
Sbjct: 367 DWWALGCLLYEMIAGQ--------------------SPFQQRKKKIKREEVERLVKEVP- 405
Query: 287 CRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRI-----TVEEALRHPYLQSLH 334
++++ RF S A L ++L DP +R+ + E HP + L+
Sbjct: 406 ---EEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKEIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFGLA+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 54/298 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA---- 105
+G G YG V + +T + AIK + D + +EI +L+ H IA
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 106 --IKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
IK PP D + +++V E TDL + + + L ++ Y ++LRGL
Sbjct: 89 AFIKK--NPPGMD--DQLWLVMEFCGAGSVTDLIKNTKGNT-LKEEWIAYICREILRGLS 143
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET-DFMTEYVVTRWYRAPELLLN 218
++H V+HRD+K N+LL + ++K+ DFG++ T ++ T ++ APE++
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA- 202
Query: 219 CTE-----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLR 273
C E Y D+WS+G E+ P P D +H +R + + +P
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAP--PLCD-MHPMRALFLIPRNP--------- 250
Query: 274 SDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
PR + ++++ +F + +E LV + ++R E+ ++HP+++
Sbjct: 251 ----------APRLKSKKWSKKFQS-------FIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 135/320 (42%), Gaps = 58/320 (18%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKD 108
+G GA+ V +N T +E A+K I +I R RE+++L + H NV+ + +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQGHRNVLELIE 78
Query: 109 IIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
++D F Y+V+E M + I + + + + L ++H+ +
Sbjct: 79 FFE--EEDRF---YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 168 HRDLKPSNLLL---NASCDLKIGDFGLARTTS--------ETDFMTEYVVTRWYRAPELL 216
HRDLKP N+L N +KI DF L T + + Y APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 217 LNCTE----YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFL 272
+E Y D+WS+G IL +++ P F G+ GS G+
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR------------CGS----DCGWD 237
Query: 273 RSDNARRYVRQLPRCRKQQFAT------RFPNK-----SSGAVDLLEKMLVFDPNKRITV 321
R + P C+ F + FP+K S A DL+ K+LV D +R++
Sbjct: 238 RGEAC-------PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290
Query: 322 EEALRHPYLQSLHDLNDEPV 341
+ L+HP++Q N P
Sbjct: 291 AQVLQHPWVQGCAPENTLPT 310
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL----REIKLLRHMEHENVIA 105
IG G +G V A +EVA+K + D D +T+ +E KL ++H N+IA
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHDPDE--DISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 106 IKDI-IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA 164
++ + ++ P ++ +V E + S +++ D + Q+ RG+ Y+H
Sbjct: 71 LRGVCLKEP------NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124
Query: 165 SV---LHRDLKPSNLLLNASCD--------LKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
++ +HRDLK SN+L+ + LKI DFGLAR T M+ W AP
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWM-AP 183
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKD 249
E ++ + ++ D+WS G +L E++T E F G D
Sbjct: 184 E-VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 37/211 (17%)
Query: 48 RPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
+ +G G +G V A N T+ V K G+ + L E +++ ++H+ ++ +
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKL 242
Query: 107 KDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQ-------QLTDDHCQYFLYQLLRGL 158
++ T +YI+ E M L ++SD+ +L D F Q+ G+
Sbjct: 243 HAVV------TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGM 291
Query: 159 KYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
++ + +HRDL+ +N+L++AS KI DFGLAR ++ +W APE +N
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAK-------FPIKW-TAPE-AIN 342
Query: 219 CTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
+T D+WS G +L EI+T R P +PG
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIP-YPG 372
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 36/224 (16%)
Query: 48 RPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTL-REIKLLRHMEHE 101
R +G GA+G V A + + VA+K + +A DN AR+ RE +LL +++HE
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN---ARKDFHREAELLTNLQHE 75
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSD-------------QQLTDDHC 147
+++ + + + +V+E M DL++ +R+ +LT
Sbjct: 76 HIVKFYGVCVEG-----DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT----E 203
+ Q+ G+ Y+ S +HRDL N L+ + +KIGDFG++R TD+
Sbjct: 131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 245
+ RW PE ++ ++T D+WS+G +L EI T ++P +
Sbjct: 191 MLPIRWM-PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 117
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 234
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 89
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 149
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 206
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 139/352 (39%), Gaps = 81/352 (23%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNI--IDARRTLR 90
G+L E+ KY IG+G+YG+V A+ ++TR AIK + N I D R
Sbjct: 19 GSLLELQKKYHLK-GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 91 EIKLLRHMEHENVIAIKDIIRPP-----------------KKDTFNDVYIVYELMDTDLH 133
E++L++ + H N+ + ++ K + F D MD
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 134 QII---RSDQQLTDDHCQYF----------------LYQLLRGLKYVHSASVLHRDLKPS 174
QI +++ + F + Q+ L Y+H+ + HRD+KP
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 175 NLLL--NASCDLKIGDFGLAR-----TTSETDFMTEYVVTRWYRAPELLLNCTE-YTAAI 226
N L N S ++K+ DFGL++ E MT T ++ APE+L E Y
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 227 DIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPR 286
D WS G +L ++ FPG V+ I++++
Sbjct: 258 DAWSAGVLLHLLLMGAVPFPG---VNDADTISQVL------------------------- 289
Query: 287 CRKQQFATRFPNK---SSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHD 335
++ PN S A DLL +L + ++R AL+HP++ D
Sbjct: 290 --NKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 48 RPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 104
R IG G +G VC+ + + VAIK + + R L E ++ +H NV+
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK-QRRDFLCEASIMGQFDHPNVV 107
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDTD-LHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVH 162
++ ++ K V IV E M+ L +R D Q T L + G++Y+
Sbjct: 108 HLEGVVTRGKP-----VMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELL 216
+HRDL N+L+N++ K+ DFGL+R E D Y T RW APE
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDPEAVYTTTGGKIPVRW-TAPE-A 219
Query: 217 LNCTEYTAAIDIWSVGCILGEIMT 240
+ ++T+A D+WS G ++ E+M+
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 70/312 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKD 108
+G G+ G V + + R VA+K++ F +I L EIKLL + H NVI
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRY-- 74
Query: 109 IIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQY--------FLYQLLRGLKY 160
D F +YI EL + +L ++ S + ++D++ + L Q+ G+ +
Sbjct: 75 -YCSETTDRF--LYIALELCNLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 161 VHSASVLHRDLKPSNLLLNASCDLK-------------IGDFGLART--TSETDFMTEY- 204
+HS ++HRDLKP N+L++ S I DFGL + + ++ F T
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 205 --VVTRWYRAPELLLNCTE------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRL 256
T +RAPELL T +IDI+S+GC+ I+++ G Y + +
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 257 ITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPN 316
I + SL ++ + R + + A DL+ +M+ DP
Sbjct: 251 IRGIF------SLDEMKCLHDRSLIAE-------------------ATDLISQMIDHDPL 285
Query: 317 KRITVEEALRHP 328
KR T + LRHP
Sbjct: 286 KRPTAMKVLRHP 297
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 130/301 (43%), Gaps = 51/301 (16%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVI 104
P +G GA G + + R+ VA+K+I + D RE++LLR EH NVI
Sbjct: 28 PKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFAD-----REVQLLRESDEHPNVI 81
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMDTDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVHS 163
K F YI EL L + + + D L Q GL ++HS
Sbjct: 82 RY---FCTEKDRQFQ--YIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS 136
Query: 164 ASVLHRDLKPSNLLL---NASCDLK--IGDFGLAR--TTSETDFMTEYVV--TRWYRAPE 214
+++HRDLKP N+L+ NA +K I DFGL + F V T + APE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 215 LLL-NCTEY-TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFL 272
+L +C E T +DI+S GC+ +++ GK Q + L+G+ SL L
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---LLGA---CSLDCL 250
Query: 273 RSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+ + A +L+EKM+ DP KR + + L+HP+ S
Sbjct: 251 HPEKHEDVI---------------------ARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289
Query: 333 L 333
L
Sbjct: 290 L 290
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKEIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +++ DFGLA+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
E+ + + R IG G +G VC+ + + VAIK + + R L E +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK-QRRDFLGEASI 76
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQL 154
+ +H N+I ++ ++ K Y+ +DT L ++D Q T L +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK---KNDGQFTVIQLVGMLRGI 133
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVTRW 209
G+KY+ +HRDL N+L+N++ K+ DFGL+R E + T + RW
Sbjct: 134 SAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
APE + ++T+A D+WS G ++ E+++
Sbjct: 194 -TAPEAIA-FRKFTSASDVWSYGIVMWEVVS 222
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 122 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N+L++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 181 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 210
Query: 237 EIMTREPLFPGKDYV 251
E++T EP F G V
Sbjct: 211 EVLTGEPPFTGDSPV 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 32 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 82
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL--CGTPEYLAPEIILS-K 199
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 20/215 (9%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ +R +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 66
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLY 152
+L+ ++H+N++ K + + ++ ++ E + L + ++ ++ D H + Y
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGR---RNLKLIMEFLPYGSLREYLQKHKERID-HIKLLQY 122
Query: 153 --QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR-- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 209 ---WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 183 PIFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
E+ + + + IG G +G VC+ V + VAIK + + + R L E +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 83
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLY 152
+ +H N+I ++ ++ K V I+ E M+ L +R +D + T L
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKP-----VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 138
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVT 207
+ G+KY+ S +HRDL N+L+N++ K+ DFG++R E + T +
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 199 RW-TAPEAIAY-RKFTSASDVWSYGIVMWEVMS 229
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +K+ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 117
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL--CGTPEYLAPEIILS-K 234
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--AGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 89
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 149
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 206
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 67 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-N 180
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 273 RSDNARR 279
+ D +R
Sbjct: 241 KKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 67 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-N 180
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 273 RSDNARR 279
+ D +R
Sbjct: 241 KKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 67 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-N 180
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 273 RSDNARR 279
+ D +R
Sbjct: 241 KKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 70 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-N 183
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 243
Query: 273 RSDNARR 279
+ D +R
Sbjct: 244 KKDPKQR 250
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLR 90
N+ + +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R R
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFER 78
Query: 91 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
EI++L+ ++H+N++ K + + I+ L L ++ ++ D H +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLL 135
Query: 151 LY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 208
Y Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 209 -----WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 196 ESPIFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 72 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-N 185
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 245
Query: 273 RSDNARR 279
+ D +R
Sbjct: 246 KKDPKQR 252
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLR 90
N+ + +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R R
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFER 78
Query: 91 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
EI++L+ ++H+N++ K + + I+ L L ++ ++ D H +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLL 135
Query: 151 LY--QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR 208
Y Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 209 -----WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 196 ESPIFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 67 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-N 180
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 273 RSDNARR 279
+ D +R
Sbjct: 241 KKDPKQR 247
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--XGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+E+ + + ++ +G G +G V N+ T+ V K G + + L E L+
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLM 61
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQ-------QLTDDHC 147
+ ++H+ ++ + ++ + +YI+ E M L ++SD+ +L D
Sbjct: 62 KTLQHDKLVRLYAVVTKEEP-----IYIITEFMAKGSLLDFLKSDEGGKVLLPKLID--- 113
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT 207
F Q+ G+ Y+ + +HRDL+ +N+L++ S KI DFGLAR + ++
Sbjct: 114 --FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 171
Query: 208 ---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+W APE +N +T ++WS G +L EI+T + +PG+
Sbjct: 172 FPIKW-TAPE-AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 52/326 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-----HE 101
+R +G G + V A + VA+K + + + EIKLL+ + E
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 102 NVIAIKDIIRPPKKDTFND-------VYIVYELMDTDLHQIIRSDQQ--LTDDHCQYFLY 152
+ + I++ D FN V +V+E++ +L +I+ + + + +
Sbjct: 81 DSMGANHILK--LLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 153 QLLRGLKYVHS-ASVLHRDLKPSNLLLNAS------CDLKIGDFGLARTTSETDFMTEYV 205
QLL GL Y+H ++H D+KP N+L+ +KI D G A E T +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSI 196
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP---GKDYVHQLRLITELIG 262
TR YR+PE+LL + DIWS C++ E++T + LF G Y I ++I
Sbjct: 197 QTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 263 SPDDASLGFLRSD-------NARRYVRQLPRCR----------KQQFATRFPNKSSGAVD 305
+ LR+ N+R +R + + + K +F+ +++ D
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK---DEAKEISD 312
Query: 306 LLEKMLVFDPNKRITVEEALRHPYLQ 331
L ML DP KR + HP+L+
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 122 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 181 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 210
Query: 237 EIMTREPLFPGKDYV 251
E++T EP F G V
Sbjct: 211 EVLTGEPPFTGDSPV 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 30/227 (13%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +E+ + + ++ +G G +G V N+ T+ V K G + + L E
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEAN 60
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQ-------QLTDD 145
L++ ++H+ ++ + ++ + +YI+ E M L ++SD+ +L D
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEP-----IYIITEYMAKGSLLDFLKSDEGGKVLLPKLID- 114
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 205
F Q+ G+ Y+ + +HRDL+ +N+L++ S KI DFGLAR + ++
Sbjct: 115 ----FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 170
Query: 206 VT---RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+W APE +N +T D+WS G +L EI+T + +PG+
Sbjct: 171 AKFPIKW-TAPE-AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGR 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 122 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 181 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 210
Query: 237 EIMTREPLFPGKDYV 251
E++T EP F G V
Sbjct: 211 EVLTGEPPFTGDSPV 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 122 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 181 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 210
Query: 237 EIMTREPLFPGKDYV 251
E++T EP F G V
Sbjct: 211 EVLTGEPPFTGDSPV 225
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 52/326 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-----HE 101
+R +G G + V A + VA+K + + + EIKLL+ + E
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 102 NVIAIKDIIRPPKKDTFND-------VYIVYELMDTDLHQIIRSDQQ--LTDDHCQYFLY 152
+ + I++ D FN V +V+E++ +L +I+ + + + +
Sbjct: 81 DSMGANHILK--LLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 153 QLLRGLKYVHS-ASVLHRDLKPSNLLLNAS------CDLKIGDFGLARTTSETDFMTEYV 205
QLL GL Y+H ++H D+KP N+L+ +KI D G A E T +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSI 196
Query: 206 VTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFP---GKDYVHQLRLITELIG 262
TR YR+PE+LL + DIWS C++ E++T + LF G Y I ++I
Sbjct: 197 QTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 263 SPDDASLGFLRSD-------NARRYVRQLPRCR----------KQQFATRFPNKSSGAVD 305
+ LR+ N+R +R + + + K +F+ +++ D
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK---DEAKEISD 312
Query: 306 LLEKMLVFDPNKRITVEEALRHPYLQ 331
L ML DP KR + HP+L+
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + ET A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ T+ E ++L++ H
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ T++ +++ +++ L+Y+
Sbjct: 67 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCT 220
HS V++RD+K NL+L+ +KI DFGL + S+ M + T Y APE+L +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-N 180
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GFL 272
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ SP+ SL G L
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 273 RSDNARR 279
+ D +R
Sbjct: 241 KKDPKQR 247
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 214
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 83
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 143
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 200
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 122 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 181 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
+ +K+ DFG+AR +++ T V+ T Y +PE + A D++S+GC+L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLY 210
Query: 237 EIMTREPLFPG 247
E++T EP F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 151/362 (41%), Gaps = 82/362 (22%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-----HE 101
IR +G G + V + + + ++ VA+K + +A A +R +K +R+ + E
Sbjct: 26 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNRE 85
Query: 102 NVIAIKDIIRPPKKDTFNDVYI--VYELMDTDLHQ-IIRSDQQLTDDHC-QYFLYQLLRG 157
V+ + D K N +I V+E++ L + II+S+ Q C + + Q+L+G
Sbjct: 86 MVVQLLDDF---KISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG 142
Query: 158 LKYVHS-ASVLHRDLKPSNLLLNAS----------------------------------- 181
L Y+H+ ++H D+KP N+LL+ +
Sbjct: 143 LDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAG 202
Query: 182 --------------CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAID 227
+KI D G A + TE + TR YR+ E+L+ + Y D
Sbjct: 203 NFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIG-SGYNTPAD 259
Query: 228 IWSVGCILGEIMTREPLF---PGKDYVH---QLRLITELIGS-------PDDASLGFLRS 274
IWS C+ E+ T + LF G++Y + LI EL+G S F
Sbjct: 260 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK 319
Query: 275 DNARRYVRQL-PRCRKQQFATRFP---NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+++ +L P + ++ +++G D L ML P KR T E LRHP+L
Sbjct: 320 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 379
Query: 331 QS 332
S
Sbjct: 380 NS 381
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 122 YIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA 180
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 181 SCDLKIGDFGLARTTSETD---FMTEYVV-TRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
+ +K+ DFG+AR +++ T V+ T Y +PE A D++S+GC+L
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLY 227
Query: 237 EIMTREPLFPGKDYV 251
E++T EP F G V
Sbjct: 228 EVLTGEPPFTGDSPV 242
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 92 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 206
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 95 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 209
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 89 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 203
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
E+ + + + IG G +G VC+ V + VAIK + + + R L E +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 68
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLY 152
+ +H N+I ++ ++ K V I+ E M+ L +R +D + T L
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKP-----VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVT 207
+ G+KY+ S +HRDL N+L+N++ K+ DFG++R E + T +
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 184 RW-TAPEAIAY-RKFTSASDVWSYGIVMWEVMS 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 115 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 229
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 211
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKL 94
E+ + + + IG G +G VC+ V + VAIK + + + R L E +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 62
Query: 95 LRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLY 152
+ +H N+I ++ ++ K V I+ E M+ L +R +D + T L
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKP-----VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 117
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTS---ETDFMTE--YVVT 207
+ G+KY+ S +HRDL N+L+N++ K+ DFG++R E + T +
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW APE + ++T+A D+WS G ++ E+M+
Sbjct: 178 RW-TAPEAIAY-RKFTSASDVWSYGIVMWEVMS 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 44/292 (15%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G GA+G V A N ET A K I + + + EI++L +H ++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
K ++I+ E I D+ LT+ Q Q+L L ++HS ++
Sbjct: 77 YYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELL----LNCTEY 222
HRDLK N+L+ D+++ DFG+ A+ ++ T ++ APE++ + T Y
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
DIWS+G L E+ EP H+L N R +
Sbjct: 192 DYKADIWSLGITLIEMAQIEPPH------HEL---------------------NPMRVLL 224
Query: 283 QLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHPYLQSL 333
++ + T P+K S D L+ L +P R + + L HP++ S+
Sbjct: 225 KIAKSDPPTLLT--PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 274
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 96 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 210
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 151/362 (41%), Gaps = 82/362 (22%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-----HE 101
IR +G G + V + + + ++ VA+K + +A A +R +K +R+ + E
Sbjct: 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNRE 101
Query: 102 NVIAIKDIIRPPKKDTFNDVYI--VYELMDTDLHQ-IIRSDQQLTDDHC-QYFLYQLLRG 157
V+ + D K N +I V+E++ L + II+S+ Q C + + Q+L+G
Sbjct: 102 MVVQLLDDF---KISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG 158
Query: 158 LKYVHS-ASVLHRDLKPSNLLLNAS----------------------------------- 181
L Y+H+ ++H D+KP N+LL+ +
Sbjct: 159 LDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAG 218
Query: 182 --------------CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAID 227
+KI D G A + TE + TR YR+ E+L+ + Y D
Sbjct: 219 NFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIG-SGYNTPAD 275
Query: 228 IWSVGCILGEIMTREPLF---PGKDYVH---QLRLITELIGS-------PDDASLGFLRS 274
IWS C+ E+ T + LF G++Y + LI EL+G S F
Sbjct: 276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK 335
Query: 275 DNARRYVRQL-PRCRKQQFATRFP---NKSSGAVDLLEKMLVFDPNKRITVEEALRHPYL 330
+++ +L P + ++ +++G D L ML P KR T E LRHP+L
Sbjct: 336 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395
Query: 331 QS 332
S
Sbjct: 396 NS 397
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 211
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 116 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 230
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 94 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + ++ + + T +W L
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 208
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 24/217 (11%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 120
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + E+ +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD---KEFFKVKEPG 177
Query: 209 -----WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 178 ESPIFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G GA+G V A N ET A K I + + + EI++L +H ++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
K ++I+ E I D+ LT+ Q Q+L L ++HS ++
Sbjct: 85 YYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 168 HRDLKPSNLLLNASCDLKIGDFGL-ARTTSETDFMTEYVVTRWYRAPELL----LNCTEY 222
HRDLK N+L+ D+++ DFG+ A+ ++ T ++ APE++ + T Y
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 223 TAAIDIWSVGCILGEIMTREP 243
DIWS+G L E+ EP
Sbjct: 200 DYKADIWSLGITLIEMAQIEP 220
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 117
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 177
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 234
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 50 IGRGAYGIVCAA-VNSETREE--VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IG G +G VC+ + + E VAIK + + + R L E ++ +H NVI +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVIHL 73
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR-SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ ++ K T V I+ E M+ L +R +D Q T L + G+KY+
Sbjct: 74 EGVV---TKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLAR----TTSE---TDFMTEYVVTRWYRAPELLL 217
+ +HR L N+L+N++ K+ DFGL+R TS+ T + + RW APE +
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AI 186
Query: 218 NCTEYTAAIDIWSVGCILGEIMT 240
++T+A D+WS G ++ E+M+
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 91
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 151
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 208
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 150/360 (41%), Gaps = 80/360 (22%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE----- 101
IR +G G + V + + + VA+K + +A A L EIKLL+ +
Sbjct: 36 IRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETA---LDEIKLLKCVRESDPSDP 92
Query: 102 NVIAIKDIIRPPKKDTFNDVYI--VYELMDTDLHQ-IIRSDQQLTDDHC-QYFLYQLLRG 157
N + +I K N +++ V+E++ L + II+S+ Q C + + Q+L+G
Sbjct: 93 NKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQG 152
Query: 158 LKYVHS-ASVLHRDLKPSNLLL--------------------------------NASCDL 184
L Y+HS ++H D+KP N+L+ + DL
Sbjct: 153 LDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADL 212
Query: 185 ---------------KIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIW 229
KI D G A + TE + TR YR+ E+L+ Y+ DIW
Sbjct: 213 LVNPLDPRNADKIRVKIADLGNACWVHK--HFTEDIQTRQYRSIEVLIGAG-YSTPADIW 269
Query: 230 SVGCILGEIMTREPLF---PGKDYVH---QLRLITELIGS-PDDASLGFLRSD---NARR 279
S C+ E+ T + LF G+DY + I EL+GS P +L S N R
Sbjct: 270 STACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRG 329
Query: 280 YVRQLPRCRKQQF------ATRFPNKSSGA-VDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+R + + + +P++ + D L ML P KR + E LRHP+L S
Sbjct: 330 ELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 389
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ +++ ++ +LRGL Y+ ++HRD+KPSN+
Sbjct: 87 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 146
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y APE L T Y+ DIWS+G L
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMAPE-RLQGTHYSVQSDIWSMGLSLV 204
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 205 ELAVGRYPIPP 215
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILS-K 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN---- 102
+R +G G++G V + A+K ++ +R L+ +EH N
Sbjct: 11 LRTLGTGSFGRVHLIRSRHNGRYYAMK--------VLKKEIVVR----LKQVEHTNDERL 58
Query: 103 ---VIAIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLL 155
++ IIR TF D ++ +MD +L ++R Q+ + +++ ++
Sbjct: 59 MLSIVTHPFIIR--MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 156 RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPEL 215
L+Y+HS +++RDLKP N+LL+ + +KI DFG A+ + + T Y APE
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL--CGTPDYIAPE- 173
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMT 240
+++ Y +ID WS G ++ E++
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLA 198
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 24/217 (11%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 64
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 121
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HR+L N+L+ +KIGDFGL + + EY +
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQD---KEYYKVKEPG 178
Query: 209 -----WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 179 ESPIFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 70/312 (22%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKD 108
+G G+ G V + + R VA+K++ F +I L EIKLL + H NVI
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRY-- 74
Query: 109 IIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQY--------FLYQLLRGLKY 160
D F +YI EL + +L ++ S + ++D++ + L Q+ G+ +
Sbjct: 75 -YCSETTDRF--LYIALELCNLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 161 VHSASVLHRDLKPSNLLLNASCDLK-------------IGDFGLART--TSETDF---MT 202
+HS ++HRDLKP N+L++ S I DFGL + + + F +
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 203 EYVVTRWYRAPELLLNCTE------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRL 256
T +RAPELL T +IDI+S+GC+ I+++ G Y + +
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 257 ITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPN 316
I + SL ++ + R + + A DL+ +M+ DP
Sbjct: 251 IRGIF------SLDEMKCLHDRSLIAE-------------------ATDLISQMIDHDPL 285
Query: 317 KRITVEEALRHP 328
KR T + LRHP
Sbjct: 286 KRPTAMKVLRHP 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 211
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 102 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 216
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 156 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 270
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ ++ P F
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 98 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 212
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 211
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 28/274 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 63
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQL 154
H N++ P+ + IV + + H + S+ + Q
Sbjct: 64 KTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYR 211
RG+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ + +
Sbjct: 118 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 212 APEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----SPD 265
APE+ + + Y+ D+++ G +L E+MT + + + Q I E++G SPD
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGRGSLSPD 234
Query: 266 DASLGFLRSDNARRYVRQLPRCRKQQFATR--FP 297
L +RS+ +R R + C K++ R FP
Sbjct: 235 ---LSKVRSNCPKRMKRLMAECLKKKRDERPSFP 265
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 30/275 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQL 154
H N++ P+ + IV + + H + S+ + Q
Sbjct: 76 KTRHVNILLFMGYSTAPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVVTRWY 210
RG+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F W
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 211 RAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----SP 264
APE+ + + Y+ D+++ G +L E+MT + + + Q I E++G SP
Sbjct: 190 -APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGRGSLSP 245
Query: 265 DDASLGFLRSDNARRYVRQLPRCRKQQFATR--FP 297
D L +RS+ +R R + C K++ R FP
Sbjct: 246 D---LSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 30/275 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQL 154
H N++ P+ + IV + + H + S+ + Q
Sbjct: 76 KTRHVNILLFMGYSTKPQ------LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVVTRWY 210
RG+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F W
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 211 RAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG----SP 264
APE+ + + Y+ D+++ G +L E+MT + + + Q I E++G SP
Sbjct: 190 -APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGRGSLSP 245
Query: 265 DDASLGFLRSDNARRYVRQLPRCRKQQFATR--FP 297
D L +RS+ +R R + C K++ R FP
Sbjct: 246 D---LSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 98 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES--LQT 212
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 95 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + +F + + T +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 209
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 50 IGRGAYGIVCAAV---NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IGRG +G V N + A+K + N +I + + L E +++ H NV+++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSAS 165
I + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 96 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNC 219
+HRDL N +L+ +K+ DFGLAR + + + + T +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES--LQT 210
Query: 220 TEYTAAIDIWSVGCILGEIMTR-EPLFP 246
++T D+WS G +L E+MTR P +P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 68
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 125
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 186 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 69
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 126
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 187 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 94
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 151
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 212 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 67
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 124
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 185 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 66
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 123
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 184 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 70
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 127
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 188 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 219
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 39/227 (17%)
Query: 48 RPIGRGAYGIVCAAVN---SETREE--VAIKKIGNAFDNIIDARRTL-REIKLLRHMEHE 101
R +G GA+G V A S T+++ VA+K + D + AR+ RE +LL +++HE
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK---DPTLAARKDFQREAELLTNLQHE 77
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRS---------DQQLTDDHCQYFL 151
+++ + + + +V+E M DL++ +R+ D Q + L
Sbjct: 78 HIVKFYGVC-----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 152 YQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-- 202
Q+L G+ Y+ S +HRDL N L+ A+ +KIGDFG++R TD+
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 203 --EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 245
+ RW PE ++ ++T D+WS G IL EI T ++P F
Sbjct: 193 GHTMLPIRWM-PPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 120
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 181 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+G++G V A T E AIK I+ +++ + M + V+A+ D
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIK--------ILKKDVVIQDDDVECTMVEKRVLALLD- 77
Query: 110 IRPPKK-------DTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+PP T + +Y V E ++ DL I+ + + ++ ++ GL ++
Sbjct: 78 -KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT-EYVVTRWYRAPELLLNCT 220
H +++RDLK N++L++ +KI DFG+ + T E+ T Y APE++
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAY-Q 195
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 259
Y ++D W+ G +L E++ +P F G+D + I E
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 137 RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLAR 193
R DQ T+ + + ++++HS ++ HRD+KP NLL + LK+ DFG A+
Sbjct: 120 RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
Query: 194 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 253
T++ T T +Y APE +L +Y + D+WS+G I+ ++ P F
Sbjct: 180 ETTQNALQTP-CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF-------- 229
Query: 254 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK-----SSGAVDLLE 308
++ G S +R R R Q+ FPN S A L+
Sbjct: 230 ------------YSNTGQAISPGMKR------RIRLGQYG--FPNPEWSEVSEDAKQLIR 269
Query: 309 KMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPR-PFH 347
+L DP +R+T+ + + HP+ +N V P+ P H
Sbjct: 270 LLLKTDPTERLTITQFMNHPW------INQSMVVPQTPLH 303
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 137 RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS---CDLKIGDFGLAR 193
R DQ T+ + + ++++HS ++ HRD+KP NLL + LK+ DFG A+
Sbjct: 101 RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
Query: 194 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 253
T++ T T +Y APE +L +Y + D+WS+G I+ ++ P F
Sbjct: 161 ETTQNALQTP-CYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF-------- 210
Query: 254 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNK-----SSGAVDLLE 308
++ G S +R R R Q+ FPN S A L+
Sbjct: 211 ------------YSNTGQAISPGMKR------RIRLGQYG--FPNPEWSEVSEDAKQLIR 250
Query: 309 KMLVFDPNKRITVEEALRHPYLQSLHDLNDEPVCPR-PFH 347
+L DP +R+T+ + + HP+ +N V P+ P H
Sbjct: 251 LLLKTDPTERLTITQFMNHPW------INQSMVVPQTPLH 284
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NL+++ +++ DFG A+ + T Y APE+++
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIII-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 62
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 119
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 180 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 61
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 118
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 179 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L ++ ++ D H + Y
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERID-HIKLLQYT 120
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 181 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 96 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 155
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 156 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 213
Query: 237 EI-MTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATR 295
E+ + R P+ G + L+ ++ P P+ F+
Sbjct: 214 EMAVGRYPIGSGSGSMAIFELLDYIVNEPP-------------------PKLPSGVFSLE 254
Query: 296 FPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
F D + K L+ +P +R +++ + H +++
Sbjct: 255 FQ-------DFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 18 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 72
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 73 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++ +W
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
APE +N +T D+WS G +L EI+T + +PG
Sbjct: 187 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 38 EVSSKYVPPIRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+ +++ ++ +G+G +G V C + T E VA+KK+ ++ + + R REI+
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 66
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+L+ ++H+N++ K + + I+ L L +++ + D H + Y
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERID-HIKLLQYT 123
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--- 208
Q+ +G++Y+ + +HRDL N+L+ +KIGDFGL + + +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 209 --WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L ++++ A D+WS G +L E+ T
Sbjct: 184 IFWY-APESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 50 IGRGAYGIVCAAV--NSETREEV--AIKKIGNAFDNIIDARRT--LREIKLLRHMEHENV 103
IG G +G V + S ++EV AIK + + + +R L E ++ H N+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNI 108
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTD-LHQIIR-SDQQLTDDHCQYFLYQLLRGLKYV 161
I ++ +I + + I+ E M+ L + +R D + + L + G+KY+
Sbjct: 109 IRLEGVI-----SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPEL 215
+ + +HRDL N+L+N++ K+ DFGL+R E D Y + RW APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRW-TAPE- 220
Query: 216 LLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++T+A D+WS G ++ E+MT
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T Y AP ++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEYLAPAIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRGAYG V V+ + + +A+K+I + D + + ++R + ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHC-QYFLYQL----LRGLKYV-HS 163
+ D +I ELM T + + + DD + L ++ ++ L ++ +
Sbjct: 90 LF-----REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 164 ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELL---LNCT 220
++HRD+KPSN+LL+ S ++K+ DFG++ ++ T R Y APE + +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELI-GSPDDASLGFLRSDNARR 279
Y D+WS+G L E+ T FP + +T+++ G P
Sbjct: 205 GYDVRSDVWSLGITLYELATGR--FPYPKWNSVFDQLTQVVKGDPP-------------- 248
Query: 280 YVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDE 339
QL +++F+ F ++ + L D +KR +E L+HP++ + E
Sbjct: 249 ---QLSNSEEREFSPSF-------INFVNLCLTKDESKRPKYKELLKHPFILMYEERAVE 298
Query: 340 PVC 342
C
Sbjct: 299 VAC 301
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 68
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 69 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++ +W
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
APE +N +T D+WS G +L EI+T + +PG
Sbjct: 183 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 3 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 57
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 58 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 111
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV---TRW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++ +W
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
APE +N +T D+WS G +L EI+T + +PG
Sbjct: 172 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 13 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 67
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 68 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++ +W
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
APE +N +T D+WS G +L EI+T + +PG
Sbjct: 182 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I + + +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNIITL---LGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 62
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 63 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV---TRW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + ++ +W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
APE +N +T D+WS G +L EI+T + +PG
Sbjct: 177 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEAL 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 64 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++A+ +K+GDFGL+R ++ + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ------------LTDDHCQ 148
NV+ + P + ++ E +L +RS + LT +H
Sbjct: 92 NVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE---Y 204
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 148 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 205 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ +W APE + + YT D+WS G +L EI +
Sbjct: 208 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 241
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 42 KYVPPIRPIGRGAYGIVCA----AVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLR 96
+Y+ IR +G G +G V N T E VA+K + D R + EI +LR
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILR 71
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
+ HE++I K + + +V E + + + F Q+
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICE 128
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR-------- 208
G+ Y+HS +HR+L N+LL+ +KIGDFGLA+ E EY R
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVF 185
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L Y A+ D+WS G L E++T
Sbjct: 186 WY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEAL 443
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 444 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++A+ +K+GDFGL+R ++ + + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 558 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS----------------DQQLTD 144
+N+I +++ +D V + Y +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQDGPLYVIVAYA-SKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 145 DHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY 204
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 205 VVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I+ +G G++G V + E+ A+K I+D ++ ++ +K + H +E I
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 105 AIKDIIRPPKKDTFNDVYIVYELMD----TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
A+ + +F D +Y +M+ ++ +R + ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
+HS +++RDLKP NLL++ +++ DFG A+ + T APE++L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--CGTPEALAPEIIL-SK 213
Query: 221 EYTAAIDIWSVGCILGEIMTREPLF 245
Y A+D W++G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + ++I DFGLAR + D+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I ++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNII---HLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG+G++G V A + A+K + ++ + + K +H+ E + +
Sbjct: 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVL---------QKKAILKKKEEKHIMSERNVLL 93
Query: 107 KDIIRPP------KKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
K++ P T + +Y V + ++ +L ++ ++ + +++ ++ L
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLN 218
Y+HS ++++RDLKP N+LL++ + + DFGL + E + T + T Y APE +L+
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLH 212
Query: 219 CTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ--------LRLITELIGSPDDASLG 270
Y +D W +G +L E++ P F ++ L+L + S G
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEG 272
Query: 271 FLRSDNARR 279
L+ D +R
Sbjct: 273 LLQKDRTKR 281
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 24/261 (9%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTL 89
G + V+ ++ +G+G +G V T A+K + +I A+ TL
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTL 57
Query: 90 REIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQ 148
E ++L++ H + A+K + T + + V E + +L + ++ ++D +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDRAR 112
Query: 149 YFLYQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVV 206
++ +++ L Y+HS +V++RDLK NL+L+ +KI DFGL + + M +
Sbjct: 113 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG 172
Query: 207 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL---- 260
T Y APE+L + +Y A+D W +G ++ E+M F +D+ + +L L+ E+
Sbjct: 173 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 231
Query: 261 IGSPDDASL--GFLRSDNARR 279
P+ SL G L+ D +R
Sbjct: 232 TLGPEAKSLLSGLLKKDPKQR 252
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREI 92
G +EV + + + +G G +G V N T+ V K G+ + L E
Sbjct: 1 GPEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEA 55
Query: 93 KLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQY 149
L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 56 NLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 206
Q+ G+ ++ + +HR+L+ +N+L++ + KI DFGLAR + ++
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 207 TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+W APE +N +T D+WS G +L EI+T + +PG
Sbjct: 170 IKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 42 KYVPPIRPIGRGAYGIVCA----AVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLR 96
+Y+ IR +G G +G V N T E VA+K + D R + EI +LR
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILR 71
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
+ HE++I K + + +V E + + + F Q+
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICE 128
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR-------- 208
G+ Y+H+ +HR+L N+LL+ +KIGDFGLA+ E EY R
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVF 185
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
WY APE L Y A+ D+WS G L E++T
Sbjct: 186 WY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 68
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 69 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 183 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI-- 104
I IG G +G V A + + I+++ ++N + RE+K L ++H N++
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRV--KYNN----EKAEREVKALAKLDHVNIVHY 70
Query: 105 ------------AIKDIIRPPKKDTFND----------VYIVYELMDTD-LHQII--RSD 139
D + D N ++I E D L Q I R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 140 QQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD 199
++L Q+ +G+ Y+HS ++HRDLKPSN+ L + +KIGDFGL +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 200 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
T T Y +PE ++ +Y +D++++G IL E++
Sbjct: 191 KRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 16 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 70
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 71 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 185 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ------------LTDDHCQ 148
NV+ + P + ++ E +L +RS + LT +H
Sbjct: 92 NVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE---Y 204
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 148 CYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 205 VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ +W APE + + YT D+WS G +L EI +
Sbjct: 208 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 241
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
I IG G +G V A + + IK++ ++N + RE+K L ++H N++
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRV--KYNN----EKAEREVKALAKLDHVNIVHY 69
Query: 107 KDIIRP----PKKDTFND-------VYIVYELMDTD-LHQII--RSDQQLTDDHCQYFLY 152
P+ + N ++I E D L Q I R ++L
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRA 212
Q+ +G+ Y+HS +++RDLKPSN+ L + +KIGDFGL + T Y +
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMS 189
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIM 239
PE ++ +Y +D++++G IL E++
Sbjct: 190 PE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 17 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 71
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 72 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 186 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 222
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 62
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 63 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 177 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G G +G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 90 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 205 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G G +G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 88 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 203 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 241
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 24/248 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ TL E ++L++ H
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ ++D +++ +++ L Y+
Sbjct: 72 LTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 162 HS-ASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNC 219
HS +V++RDLK NL+L+ +KI DFGL + + M + T Y APE+L +
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED- 185
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GF 271
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ P+ SL G
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 245
Query: 272 LRSDNARR 279
L+ D +R
Sbjct: 246 LKKDPKQR 253
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G G +G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 93 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 208 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 246
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 24/248 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ TL E ++L++ H
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ ++D +++ +++ L Y+
Sbjct: 70 LTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 162 HS-ASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNC 219
HS +V++RDLK NL+L+ +KI DFGL + + M + T Y APE+L +
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED- 183
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GF 271
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ P+ SL G
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 243
Query: 272 LRSDNARR 279
L+ D +R
Sbjct: 244 LKKDPKQR 251
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 10 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 64
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 65 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 179 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G GA+G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRS----------------DQQLTD 144
+N+I +++ +D V + Y +L + +R+ ++Q+T
Sbjct: 101 KNII---NLLGACTQDGPLYVIVGYA-SKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 145 DHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY 204
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 205 VVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHM-EHEN 102
+ +G GA+G V A +E A+ K+ + + + + E+K++ H+ +HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIR----------------SDQQLTDDH 146
++ + Y Y DL +R ++QL+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCY----GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 147 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEY 204
+F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D M + Y
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNY 222
Query: 205 VV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+V +W APE + +C YT D+WS G +L EI +
Sbjct: 223 IVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 48 RPIGRGAYGIVCAA----VNSETREEVAIKKIGNAFDNII--DARRTLREIKLLRHM-EH 100
+P+G G +G V A ++ + +E + D+ D + E+++++ + +H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQLT 143
+N+I +++ +D +Y++ E +L + +R+ ++Q+T
Sbjct: 147 KNII---NLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
YQL RG++Y+ S +HRDL N+L+ + +KI DFGLAR + D+ +
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE L + YT D+WS G ++ EI T
Sbjct: 262 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFT 300
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 62
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 63 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV---TRW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 177 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLL 95
+EV + + + +G G +G V N T+ V K G+ + L E L+
Sbjct: 9 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAEANLM 63
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQYFLY 152
+ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 64 KQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RW 209
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + + +W
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
APE +N +T D+WS G +L EI+T + +PG
Sbjct: 178 -TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEAL 443
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 444 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 558 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 50 IGRGAYGIVCAA-VNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAI 106
+G G +G+V VN+ T VA+KK+ D + + +EIK++ +HEN++ +
Sbjct: 39 MGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT----DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+D+ +VY M D + L+ G+ ++H
Sbjct: 96 LGF-----SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNC 219
+HRD+K +N+LL+ + KI DFGLAR + ++T + V T Y APE L
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG- 209
Query: 220 TEYTAAIDIWSVGCILGEIMTREP 243
E T DI+S G +L EI+T P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIK-------KIGNAFDNIIDARRTLREIKLLRHMEH 100
R IGRG +G V ++T + A+K K+ ++ R L L+ +
Sbjct: 194 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML---SLVSTGDC 250
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
++ + P K +F + +LM+ DLH + ++ +++ +++ GL+
Sbjct: 251 PFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 219
++H+ V++RDLKP+N+LL+ ++I D GLA S+ V T Y APE+L
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 220 TEYTAAIDIWSVGCILGEIM 239
Y ++ D +S+GC+L +++
Sbjct: 365 VAYDSSADWFSLGCMLFKLL 384
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIK-------KIGNAFDNIIDARRTLREIKLLRHMEH 100
R IGRG +G V ++T + A+K K+ ++ R L L+ +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML---SLVSTGDC 251
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
++ + P K +F + +LM+ DLH + ++ +++ +++ GL+
Sbjct: 252 PFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 219
++H+ V++RDLKP+N+LL+ ++I D GLA S+ V T Y APE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 220 TEYTAAIDIWSVGCILGEIM 239
Y ++ D +S+GC+L +++
Sbjct: 366 VAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIK-------KIGNAFDNIIDARRTLREIKLLRHMEH 100
R IGRG +G V ++T + A+K K+ ++ R L L+ +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML---SLVSTGDC 251
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
++ + P K +F + +LM+ DLH + ++ +++ +++ GL+
Sbjct: 252 PFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 219
++H+ V++RDLKP+N+LL+ ++I D GLA S+ V T Y APE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 220 TEYTAAIDIWSVGCILGEIM 239
Y ++ D +S+GC+L +++
Sbjct: 366 VAYDSSADWFSLGCMLFKLL 385
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIK-------KIGNAFDNIIDARRTLREIKLLRHMEH 100
R IGRG +G V ++T + A+K K+ ++ R L L+ +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML---SLVSTGDC 251
Query: 101 ENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
++ + P K +F + +LM+ DLH + ++ +++ +++ GL+
Sbjct: 252 PFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 160 YVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNC 219
++H+ V++RDLKP+N+LL+ ++I D GLA S+ V T Y APE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 220 TEYTAAIDIWSVGCILGEIM 239
Y ++ D +S+GC+L +++
Sbjct: 366 VAYDSSADWFSLGCMLFKLL 385
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHM-EHEN 102
+ +G GA+G V A +E A+ K+ + + + + E+K++ H+ +HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 103 VIAIKDIIRPPKKDTFNDVYIVY-----------ELMDTDLHQIIRSDQQLTDDHCQYFL 151
++ + Y Y +++TD I + T D +F
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD-LLHFS 170
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVV--- 206
Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D M + Y+V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVKGN 225
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + +C YT D+WS G +L EI +
Sbjct: 226 ARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 54/238 (22%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASC-DLKIGDFGLARTTSETDF-MTEYVV- 206
++ L + LK +H ++HRD+KPSN L N + DFGLA+ T +T + ++V
Sbjct: 122 YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 207 ---------------------------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
T +RAPE+L C T AID+WS G I ++
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 240 T-REPLFPGKDYVHQLRLITELIGSPD--DASLGFLRSDNARRYV-----RQL-PRCRKQ 290
+ R P + D + L I + GS + A+ F +S + V R+L R R
Sbjct: 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGM 301
Query: 291 QFAT-RFPNKSSGAVDLLE--------------KMLVFDPNKRITVEEALRHPYLQSL 333
+T + + G LE K+L +P RIT EEAL HP+ + +
Sbjct: 302 DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 42 KYVPPIRPIGRGAYGIVCA----AVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLLR 96
+Y+ IR +G G +G V N T E VA+K + D R + EI +LR
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA--DAGPQHRSGWKQEIDILR 88
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
+ HE++I K + +V E + + + F Q+
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICE 145
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR-------W 209
G+ Y+H+ +HRDL N+LL+ +KIGDFGLA+ E Y V W
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH--EXYRVREDGDSPVFW 203
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
Y APE L Y A+ D+WS G L E++T
Sbjct: 204 Y-APECLKEYKFYYAS-DVWSFGVTLYELLT 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 32/266 (12%)
Query: 25 GKYVQYNVY-GNLFEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNA 78
G + +VY + +EV+ + + R +G+G++G+V V E VAIK + A
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 79 FDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIR 137
++ + L E +++ +V+ + ++ + ++ ELM DL +R
Sbjct: 61 -ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLR 114
Query: 138 SDQQLTDDH----------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 187
S + +++ ++ G+ Y+++ +HRDL N ++ +KIG
Sbjct: 115 SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 174
Query: 188 DFGLARTTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-RE 242
DFG+ R ETD+ + + RW +PE L + +T D+WS G +L EI T E
Sbjct: 175 DFGMTRDIYETDYYRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAE 232
Query: 243 PLFPGKDYVHQLRLITE--LIGSPDD 266
+ G LR + E L+ PD+
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 11 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 69
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 185 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 242
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 243 FVMEGGLLDKPDN 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 65
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 181 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 239 FVMEGGLLDKPDN 251
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEAL 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 64 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 24/248 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ TL E ++L++ H
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ ++D +++ +++ L Y+
Sbjct: 213 LTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 162 HS-ASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNC 219
HS +V++RDLK NL+L+ +KI DFGL + + M + T Y APE+L +
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED- 326
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GF 271
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ P+ SL G
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 386
Query: 272 LRSDNARR 279
L+ D +R
Sbjct: 387 LKKDPKQR 394
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEAL 66
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 67 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 181 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 78
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 194 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 252 FVMEGGLLDKPDN 264
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 93
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ--------------LTDDH 146
NV+ + P + ++ E +L +RS + LT +H
Sbjct: 94 NVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 147 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV 206
+ +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 150 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 207 TRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE + + YT D+WS G +L EI +
Sbjct: 210 ARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 42 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 100
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 216 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 273
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 274 FVMEGGLLDKPDN 286
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEAL 65
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 66 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 119
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 180 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEAL 60
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 61 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 175 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 330 VV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 378
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 379 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 437
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 438 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEAL 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 64 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 24/248 (9%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHEN 102
++ +G+G +G V T A+K + +I A+ TL E ++L++ H
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ A+K + T + + V E + +L + ++ ++D +++ +++ L Y+
Sbjct: 210 LTALKYSFQ-----THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 162 HS-ASVLHRDLKPSNLLLNASCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNC 219
HS +V++RDLK NL+L+ +KI DFGL + + M + T Y APE+L +
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED- 323
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDY--VHQLRLITEL----IGSPDDASL--GF 271
+Y A+D W +G ++ E+M F +D+ + +L L+ E+ P+ SL G
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL 383
Query: 272 LRSDNARR 279
L+ D +R
Sbjct: 384 LKKDPKQR 391
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHM-EHEN 102
+ +G GA+G V A +E A+ K+ + + + + E+K++ H+ +HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 103 VIAIKDIIRPPKKDTFNDVYIVY-----------ELMDTDLHQIIRSDQQLTDDHCQYFL 151
++ + Y Y +++TD I ++ L+ +F
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI-ANSTLSTRDLLHFS 170
Query: 152 YQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVV--- 206
Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D M + Y+V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVKGN 225
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + +C YT D+WS G +L EI +
Sbjct: 226 ARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 187 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 245 FVMEGGLLDKPDN 257
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEAL 91
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 92 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 145
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 206 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 46/260 (17%)
Query: 91 EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQ--LTDDHCQ 148
E++++ +++E + + II +++VYI+YE M+ D I++ D+ + D +
Sbjct: 93 ELQIITDIKNEYCLTCEGIIT-----NYDEVYIIYEYMEND--SILKFDEYFFVLDKNYT 145
Query: 149 YFL---------YQLLRGLKYVHS-ASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 198
F+ +L Y+H+ ++ HRD+KPSN+L++ + +K+ DFG E+
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG------ES 199
Query: 199 DFMTEYVV-----TRWYRAPELLLNCTEYTAA-IDIWSVGCILGEIMTREPLFPGKDYVH 252
++M + + T + PE N + Y A +DIWS+G L + F K +
Sbjct: 200 EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259
Query: 253 QL--RLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKM 310
+L + T+ I P D R + +K + F S+ +D L+
Sbjct: 260 ELFNNIRTKNIEYPLD-----------RNHFLYPLTNKKSTCSNNFL--SNEDIDFLKLF 306
Query: 311 LVFDPNKRITVEEALRHPYL 330
L +P +RIT E+AL+H +L
Sbjct: 307 LRKNPAERITSEDALKHEWL 326
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 146
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMT 202
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 203 E---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + +W APE + + YT D+WS G +L EI +
Sbjct: 207 KGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 50 IGRGAYGIVCAA-VNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAI 106
+G G +G+V VN+ T VA+KK+ D + + +EIK++ +HEN++ +
Sbjct: 39 MGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT----DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+D+ +VY M D + L+ G+ ++H
Sbjct: 96 LGF-----SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNC 219
+HRD+K +N+LL+ + KI DFGLAR + ++T V T Y APE L
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG- 209
Query: 220 TEYTAAIDIWSVGCILGEIMTREP 243
E T DI+S G +L EI+T P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 187 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 245 FVMEGGLLDKPDN 257
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 137
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMT 202
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 203 E---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + +W APE + + YT D+WS G +L EI +
Sbjct: 198 KGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 128
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 183
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMT 202
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 203 E---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + +W APE + + YT D+WS G +L EI +
Sbjct: 244 KGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 70
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 186 YRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M+ L ++ + QL D Q + G+ Y
Sbjct: 78 VV------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ-----IASGMAY 126
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 127 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 185
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 186 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 137
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMT 202
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 203 E---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + +W APE + + YT D+WS G +L EI +
Sbjct: 198 KGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 46/290 (15%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDAR----RTLREIKLLRHMEHENV 103
RP+G+G +G V A ++ VA+K + F + I+ + REI++ H+ H N+
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVL---FKSQIEKEGVEHQLRREIEIQAHLHHPNI 85
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + ++ +Y++ E +L++ ++ + + +L L Y H
Sbjct: 86 LRLYNYFYDRRR-----IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
V+HRD+KP NLLL +LKI DFG + T T Y PE++ +
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTLDYLPPEMI-EGRMH 198
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+D+W +G + E++ P F + R I ++
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV---------------------- 236
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQS 332
+F P +GA DL+ K+L +P++R+ + + HP++++
Sbjct: 237 ------DLKFPASVP---TGAQDLISKLLRHNPSERLPLAQVSAHPWVRA 277
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEAL 68
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 69 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 122
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + + +
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 183 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR + K GN + L+E ++++ + HE ++ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-----MSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 248 VV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 296
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGL R + ++ +W APE L
Sbjct: 297 VERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW-TAPEAAL 355
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 356 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 32/266 (12%)
Query: 25 GKYVQYNVY-GNLFEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNA 78
G + +VY + +EV+ + + R +G+G++G+V V E VAIK + A
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 79 FDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIR 137
++ + L E +++ +V+ + ++ + ++ ELM DL +R
Sbjct: 61 -ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLR 114
Query: 138 SDQQLTDDH----------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIG 187
S + +++ ++ G+ Y+++ +HRDL N ++ +KIG
Sbjct: 115 SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 174
Query: 188 DFGLARTTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-RE 242
DFG+ R ETD + + RW +PE L + +T D+WS G +L EI T E
Sbjct: 175 DFGMTRDIXETDXXRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAE 232
Query: 243 PLFPGKDYVHQLRLITE--LIGSPDD 266
+ G LR + E L+ PD+
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 23/224 (10%)
Query: 33 YGNLFEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLRE 91
+ + +EV + + + +G G G V N T+ V K G+ + L E
Sbjct: 4 WEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAF-----LAE 58
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIR--SDQQLTDDHCQ 148
L++ ++H+ ++ + ++ T +YI+ E M+ L ++ S +LT +
Sbjct: 59 ANLMKQLQHQRLVRLYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 149 YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT- 207
Q+ G+ ++ + +HRDL+ +N+L++ + KI DFGLAR + +
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF 172
Query: 208 --RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFPG 247
+W APE +N +T D+WS G +L EI+T R P +PG
Sbjct: 173 PIKW-TAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 10 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 68
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + ++
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 184 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 241
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 242 FVMEGGLLDKPDN 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE---EVAIKKIGNAFDNIIDARRTLREIK 93
+E+ + + R IG G +G V + VAIK N + + + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEAL 63
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY- 152
+R +H +++ + +I T N V+I+ EL + ++ + D LY
Sbjct: 64 TMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 153 -QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTR 208
QL L Y+ S +HRD+ N+L++++ +K+GDFGL+R ++ + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
W APE +N +T+A D+W G + EI+
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHM-EHEN 102
+ +G GA+G V A +E A+ K+ + + + + E+K++ H+ +HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH------CQYFLYQLLR 156
++ + Y Y + L + +D D +F Q+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVV-------T 207
G+ ++ S + +HRD+ N+LL KIGDFGLAR D M + Y+V
Sbjct: 172 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPV 226
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + +C YT D+WS G +L EI +
Sbjct: 227 KW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 257
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 72 VV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 120
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 121 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 179
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 180 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 78
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 194 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 252 FVMEGGLLDKPDN 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 70 VV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 118
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 119 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 177
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 178 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLREI 92
EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNEA 70
Query: 93 KLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ--- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 125
Query: 149 -------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD+
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 202 TE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 186 RKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 226
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 70
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 186 XRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHM-EHEN 102
+ +G GA+G V A +E A+ K+ + + + + E+K++ H+ +HEN
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH------CQYFLYQLLR 156
++ + Y Y + L + +D D +F Q+ +
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVV-------T 207
G+ ++ S + +HRD+ N+LL KIGDFGLAR D M + Y+V
Sbjct: 164 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPV 218
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + +C YT D+WS G +L EI +
Sbjct: 219 KW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 249
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M+ L ++ + QL D Q + G+ Y
Sbjct: 78 VV------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ-----IASGMAY 126
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 127 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW-TAPEAAL 185
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 186 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 70
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 185
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 186 XRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 247 VV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 295
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 354
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 355 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 247 VV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 295
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 354
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 355 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDTD-LHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 139 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 198
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 256
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 257 EMAVGRYPIPP 267
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 9 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 67
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 68 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX 182
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 183 XRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 224
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 91
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 92 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 38/242 (15%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 132
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 133 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLI 257
+ R + APE L + YT D+WS G +L EI T +PG +L+
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 306
Query: 258 TE 259
E
Sbjct: 307 KE 308
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 91
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 92 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 5 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 63
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ETD
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 179 XRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 237 FVMEGGLLDKPDN 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 84
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 85 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 240
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDTD-LHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 80 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 139
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ + + E+V TR Y +PE L T Y+ DIWS+G L
Sbjct: 140 LVNSRGEIKLCDFGVSGQLID-EMANEFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 197
Query: 237 EI 238
E+
Sbjct: 198 EM 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 74 VV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 122
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 123 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 181
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 182 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 80
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 81 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 83
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 84 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 239
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 91
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 92 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 247
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 104 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 221
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 222 EMAVGRYPIPP 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 76
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 77 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D+
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 247 VV------SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 295
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 354
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 355 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 146
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE + + YT D+WS G +L EI +
Sbjct: 207 KGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 93
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ----------------LTD 144
NV+ + P + ++ E +L +RS + LT
Sbjct: 94 NVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 145 DHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTE 203
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D++ +
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 204 ---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ +W APE + + YT D+WS G +L EI +
Sbjct: 210 GDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 137
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE + + YT D+WS G +L EI +
Sbjct: 198 KGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 137
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE + + YT D+WS G +L EI +
Sbjct: 198 KGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 236
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMD--TDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
I + D P D+F ++ E M+ DL I L ++ + F +Q+L +++
Sbjct: 76 IRLLDWFERP--DSF---VLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 162 HSASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCT 220
H+ VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE +
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHR 189
Query: 221 EYTAAIDIWSVGCIL 235
+ + +WS+G +L
Sbjct: 190 YHGRSAAVWSLGILL 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 129/280 (46%), Gaps = 38/280 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAF---DNIIDARRTLREIKLLRHMEHENV 103
+R IGRG+Y V +T A+K + D ID +T + + + H +
Sbjct: 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFL 72
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T + ++ V E ++ DL ++ ++L ++H +++ ++ L Y+H
Sbjct: 73 VGLHSCFQ-----TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTE 221
+++RDLK N+LL++ +K+ D+G+ + D + + T Y APE +L +
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGED 186
Query: 222 YTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y ++D W++G ++ E+M R P +++GS D+ N Y
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPF--------------DIVGSSDNP------DQNTEDY 226
Query: 281 VRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRI 319
+ Q+ ++ R P S A +L+ L DP +R+
Sbjct: 227 LFQVILEKQ----IRIPRSLSVKAASVLKSFLNKDPKERL 262
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVC-----AAVNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EV+ + + R +G+G++G+V V E VAIK + A ++ + L E
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNE 65
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDH---- 146
+++ +V+ + ++ + ++ ELM DL +RS + +++
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQP-----TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 147 ------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N + +KIGDFG+ R ETD+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLR 255
+ + RW +PE L + +T D+WS G +L EI T E + G LR
Sbjct: 181 YRKGGKGLLPVRWM-SPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 256 LITE--LIGSPDD 266
+ E L+ PD+
Sbjct: 239 FVMEGGLLDKPDN 251
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL +N+L+ + K+ DFGLAR + ++ +W APE L
Sbjct: 130 VERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 102 NVIAIKDIIRPPKKD--------TFNDV----------YIVYELMDTDLHQIIRSDQQLT 143
NV+ + P F ++ ++ Y++ DL++ LT
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LT 146
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE 203
+H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 204 YVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE + + YT D+WS G +L EI +
Sbjct: 207 KGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 129/280 (46%), Gaps = 38/280 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAF---DNIIDARRTLREIKLLRHMEHENV 103
+R IGRG+Y V +T A+K + D ID +T + + + H +
Sbjct: 10 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFL 68
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T + ++ V E ++ DL ++ ++L ++H +++ ++ L Y+H
Sbjct: 69 VGLHSCFQ-----TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTE 221
+++RDLK N+LL++ +K+ D+G+ + D + + T Y APE +L +
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGED 182
Query: 222 YTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y ++D W++G ++ E+M R P +++GS D+ N Y
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPF--------------DIVGSSDNP------DQNTEDY 222
Query: 281 VRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRI 319
+ Q+ ++ R P S A +L+ L DP +R+
Sbjct: 223 LFQVILEKQ----IRIPRSLSVKAASVLKSFLNKDPKERL 258
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHE- 101
+P+GRGA+G V A + T VA+K + + + R + E+K+L H+ H
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 92
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQ---------------LTDD 145
NV+ + P + ++ E +L +RS + LT +
Sbjct: 93 NVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 146 HCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYV 205
H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 206 VTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
R + APE + + YT D+WS G +L EI +
Sbjct: 209 DARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFS 245
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 76/284 (26%)
Query: 46 PIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIA 105
PI+ +GRG +G+V A N AIK+I + + + +RE+K L +EH ++
Sbjct: 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLEHPGIVR 68
Query: 106 IKD--IIRPPKK--DTFNDVYIVYELMDTDLH----------QIIRSDQ--------QLT 143
+ + PP+K + +++++ E D L +I R D QL
Sbjct: 69 YFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQ 128
Query: 144 DDHCQYFLY----------------------------------QLLRGLKYVHSASVLHR 169
+ +LY Q+ ++++HS ++HR
Sbjct: 129 PSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHR 188
Query: 170 DLKPSNLLLNASCDLKIGDFGLARTTSETDF-------MTEY------VVTRWYRAPELL 216
DLKPSN+ +K+GDFGL + + M Y V T+ Y +PE
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE-Q 247
Query: 217 LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITEL 260
++ Y+ +DI+S+G IL E+ L+ + ++R+IT++
Sbjct: 248 IHGNNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRIITDV 286
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 70
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HR+L N ++ +KIGDFG+ R ETD+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 186 YRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 13 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 71
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HR+L N ++ +KIGDFG+ R ETD+
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 186
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 187 YRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 228
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 119 NDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSA-SVLHRDLKPSNL 176
++ I E MD L Q+++ ++ + +++GL Y+ ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 177 LLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILG 236
L+N+ ++K+ DFG++ ++ +V TR Y +PE L T Y+ DIWS+G L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLV 194
Query: 237 EI-MTREPLFP 246
E+ + R P+ P
Sbjct: 195 EMAVGRYPIPP 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 110 --IRPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
+ PP YIV E M +L +R + +++T Y Q+ ++Y+
Sbjct: 97 CTLEPP-------FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L T
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNT- 207
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 50 IGRGAYGIVCAA-VNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAI 106
+G G +G+V VN+ T VA+KK+ D + + +EIK++ +HEN++ +
Sbjct: 33 MGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT----DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+D+ +VY M D + L+ G+ ++H
Sbjct: 90 LGF-----SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNC 219
+HRD+K +N+LL+ + KI DFGLAR + ++ V T Y APE L
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG- 203
Query: 220 TEYTAAIDIWSVGCILGEIMTREP 243
E T DI+S G +L EI+T P
Sbjct: 204 -EITPKSDIYSFGVVLLEIITGLP 226
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+G++G V + T E A+K I+ +++ + M + V+A+
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVK--------ILKKDVVIQDDDVECTMVEKRVLALPG- 78
Query: 110 IRPPKK-------DTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+PP T + +Y V E ++ DL I+ + + H ++ ++ GL ++
Sbjct: 79 -KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCT 220
S +++RDLK N++L++ +KI DFG+ + T+ + T Y APE++
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA-YQ 196
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 259
Y ++D W+ G +L E++ + F G+D + I E
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 130/280 (46%), Gaps = 38/280 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAF---DNIIDARRTLREIKLLRHMEHENV 103
+R IGRG+Y V +T A+K + D ID +T + + + H +
Sbjct: 25 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFL 83
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T + ++ V E ++ DL ++ ++L ++H +++ ++ L Y+H
Sbjct: 84 VGLHSCFQ-----TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTE 221
+++RDLK N+LL++ +K+ D+G+ + D + + T Y APE +L +
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGED 197
Query: 222 YTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y ++D W++G ++ E+M R P +++GS D+ N Y
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPF--------------DIVGSSDNP------DQNTEDY 237
Query: 281 VRQLPRCRKQQFATRFP-NKSSGAVDLLEKMLVFDPNKRI 319
+ Q+ ++ R P + S A +L+ L DP +R+
Sbjct: 238 LFQVILEKQ----IRIPRSMSVKAASVLKSFLNKDPKERL 273
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G+G++G V + T E A+K I+ +++ + M + V+A+
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVK--------ILKKDVVIQDDDVECTMVEKRVLALPG- 399
Query: 110 IRPPKK-------DTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+PP T + +Y V E ++ DL I+ + + H ++ ++ GL ++
Sbjct: 400 -KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCT 220
S +++RDLK N++L++ +KI DFG+ + T+ + T Y APE++
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY-Q 517
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 259
Y ++D W+ G +L E++ + F G+D + I E
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 24 GGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNII 83
G Q Y + + ++ K + ++ IG+G +G V + +VA+K I N
Sbjct: 3 GSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDA 56
Query: 84 DARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ- 141
A+ L E ++ + H N++ + +I K +YIV E M L +RS +
Sbjct: 57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 142 -LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
L D F + ++Y+ + +HRDL N+L++ K+ DFGL + S T
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 171
Query: 201 MTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTRE----PLFPGKDYV 251
T + +W APE L +++ D+WS G +L EI + P P KD V
Sbjct: 172 DTGKLPVKW-TAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 17 VKGVLTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIG 76
+K + G Q Y + + ++ K + ++ IG+G +G V + +VA+K I
Sbjct: 168 IKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCI- 224
Query: 77 NAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQI 135
N A+ L E ++ + H N++ + +I K +YIV E M L
Sbjct: 225 ---KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLYIVTEYMAKGSLVDY 277
Query: 136 IRSDQQ--LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR 193
+RS + L D F + ++Y+ + +HRDL N+L++ K+ DFGL +
Sbjct: 278 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
Query: 194 TTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTRE----PLFPGKD 249
S T T + +W APE L +++ D+WS G +L EI + P P KD
Sbjct: 338 EASSTQ-DTGKLPVKW-TAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 394
Query: 250 YV 251
V
Sbjct: 395 VV 396
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + +YIV E M L ++ + QL D Q+ G+ Y
Sbjct: 81 VV------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD-----MAAQIASGMAY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + + +W APE L
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL 188
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 105 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 220
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 257
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q SS L+ L P+ R T EE HP++Q +
Sbjct: 258 Q--------------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 48 RPIGRGAYGIVCAA---------VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM 98
+P+G GA+G V A N T+ V + K ++ D + +K++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-- 91
Query: 99 EHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRS----------------DQQ 141
+H+N+I +++ +D +Y++ E +L + +++ ++Q
Sbjct: 92 KHKNII---NLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM 201
L+ YQ+ RG++Y+ S +HRDL N+L+ +KI DFGLAR D
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 202 TEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ R + APE L + YT D+WS G +L EI T
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFT 247
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 104 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 219
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 256
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q SS L+ L P+ R T EE HP++Q +
Sbjct: 257 Q--------------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
G+ + ++ K + ++ IG+G +G V + +VA+K I N A+ L E
Sbjct: 4 GSGWALNMKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDATAQAFLAEAS 57
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ--LTDDHCQYF 150
++ + H N++ + +I K +YIV E M L +RS + L D F
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 113
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWY 210
+ ++Y+ + +HRDL N+L++ K+ DFGL + S T T + +W
Sbjct: 114 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKW- 171
Query: 211 RAPELLLNCTEYTAAIDIWSVGCILGEIMTRE----PLFPGKDYV 251
APE L ++ D+WS G +L EI + P P KD V
Sbjct: 172 TAPEALREAA-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 104 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 219
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 256
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q SS L+ L P+ R T EE HP++Q +
Sbjct: 257 Q--------------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 105 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 220
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 257
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q SS L+ L P+ R T EE HP++Q +
Sbjct: 258 Q--------------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 72 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 129 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 187
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 224
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q SS L+ L P+ R T EE HP++Q +
Sbjct: 225 Q--------------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG +G V + VA+K + A+ L+E ++L+ H N++ + +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 110 IRPPKKDTFNDVYIVYELMDT-DLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +YIV EL+ D +R++ +L + G++Y+ S +
Sbjct: 181 CTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE----YVVTRWYRAPELLLNCTEYT 223
HRDL N L+ LKI DFG++R ++ + V +W APE LN Y+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPE-ALNYGRYS 293
Query: 224 AAIDIWSVGCILGEIMT 240
+ D+WS G +L E +
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IG G G VC V + VAIK + + R L E ++ +H N+I +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-QRRDFLSEASIMGQFDHPNIIRL 115
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ ++ + Y+ +DT L D Q T L + G++Y+
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCT 220
+HRDL N+L++++ K+ DFGL+R E D Y T RW APE + T
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIRW-TAPEAIAFRT 230
Query: 221 EYTAAIDIWSVGCILGEIMT 240
+++A D+WS G ++ E++
Sbjct: 231 -FSSASDVWSFGVVMWEVLA 249
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 35 NLFEVSSKYVPPIRPIGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIK 93
+++E+ + + I+ +G G +G V N T+ VAIK + + L E +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLK---PGTMSPESFLEEAQ 56
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ--QLTDDHCQYF 150
+++ ++H+ ++ + ++ + +YIV E M+ L ++ + L +
Sbjct: 57 IMKKLKHDKLVQLYAVV------SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT--- 207
Q+ G+ Y+ + +HRDL+ +N+L+ KI DFGLAR + +
Sbjct: 111 AAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 208 RWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGKD 249
+W APE L +T D+WS G +L E++T+ + +PG +
Sbjct: 171 KW-TAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 211
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 136/300 (45%), Gaps = 45/300 (15%)
Query: 38 EVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIG-NAFDNIIDARRTLREIKLLR 96
E+ KY+ +GRG +GIV V + +++ K + D ++ +EI +L
Sbjct: 2 ELYEKYMIA-EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL----VKKEISILN 56
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQ-QLTDDHCQYFLYQL 154
H N++ + + ++ ++ +++E + D+ + I + +L + +++Q+
Sbjct: 57 IARHRNILHLHESF-----ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQV 111
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNA--SCDLKIGDFGLARTTSETDFMTEYVVTRWYRA 212
L+++HS ++ H D++P N++ S +KI +FG AR D Y A
Sbjct: 112 CEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYA 171
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMTR-EPLFPGKDYVHQLRLITELIGSPDDASLGF 271
PE+ + TA D+WS+G ++ +++ P + ++I + +A F
Sbjct: 172 PEVHQHDVVSTAT-DMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYTF 222
Query: 272 LRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQ 331
+ A F S A+D ++++LV + R+T EAL+HP+L+
Sbjct: 223 --DEEA------------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTLRE 91
+EVS + + +R +G+G++G+V + E VA+K + N ++ + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFLNE 70
Query: 92 IKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQ-- 148
+++ +V+ + ++ + +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQP-----TLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 149 --------YFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDF 200
++ G+ Y+++ +HRDL N ++ +KIGDFG+ R ET +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
Query: 201 MTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + RW APE L + +T + D+WS G +L EI +
Sbjct: 186 YRKGGKGLLPVRWM-APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 76
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 77 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 132
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPLFP--GKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 193 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 76
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 77 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 132
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPL--FPGKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 193 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 38/280 (13%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAF---DNIIDARRTLREIKLLRHMEHENV 103
+R IGRG+Y V +T A++ + D ID +T + + + H +
Sbjct: 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFL 115
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + T + ++ V E ++ DL ++ ++L ++H +++ ++ L Y+H
Sbjct: 116 VGLHSCFQ-----TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDFMTEYVVTRWYRAPELLLNCTE 221
+++RDLK N+LL++ +K+ D+G+ + D + + T Y APE +L +
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE-ILRGED 229
Query: 222 YTAAIDIWSVGCILGEIMT-REPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRY 280
Y ++D W++G ++ E+M R P +++GS D+ N Y
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPF--------------DIVGSSDNP------DQNTEDY 269
Query: 281 VRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRI 319
+ Q+ ++ R P S A +L+ L DP +R+
Sbjct: 270 LFQVILEKQ----IRIPRSLSVKAASVLKSFLNKDPKERL 305
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 42/286 (14%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDA-RRTLREIKLLRHMEHENVIA 105
R +GRG +G V A T + A KK+ + + E K+L + +++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ +T D+ +V +M+ ++ + + + ++ Q++ GL++
Sbjct: 250 LAYAF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNC 219
+H ++++RDLKP N+LL+ +++I D GLA T+ Y T + APELLL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG- 363
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARR 279
EY ++D +++G L E++ A+ G R+ +
Sbjct: 364 EEYDFSVDYFALGVTLYEMI---------------------------AARGPFRARGEKV 396
Query: 280 YVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 324
++L + R + A +P+K S + D E +L DP KR+ +
Sbjct: 397 ENKELKQ-RVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G+YG V + E A+K+ + F D R L E+ HE V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVG-----SHEKVGQHPCC 119
Query: 110 IRPPKK-DTFNDVYIVYELMDTDLHQIIRS-DQQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+R + + +Y+ EL L Q + L + +L L L ++HS ++
Sbjct: 120 VRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAID 227
H D+KP+N+ L K+GDFGL Y APELL Y A D
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG--SYGTAAD 237
Query: 228 IWSVGCILGEIMTREPLFPGKDYVHQLR 255
++S+G + E+ L G + QLR
Sbjct: 238 VFSLGLTILEVACNMELPHGGEGWQQLR 265
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 42/286 (14%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDA-RRTLREIKLLRHMEHENVIA 105
R +GRG +G V A T + A KK+ + + E K+L + +++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ +T D+ +V +M+ ++ + + + ++ Q++ GL++
Sbjct: 250 LAYAF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNC 219
+H ++++RDLKP N+LL+ +++I D GLA T+ Y T + APELLL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG- 363
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARR 279
EY ++D +++G L E++ A+ G R+ +
Sbjct: 364 EEYDFSVDYFALGVTLYEMI---------------------------AARGPFRARGEKV 396
Query: 280 YVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 324
++L + R + A +P+K S + D E +L DP KR+ +
Sbjct: 397 ENKEL-KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 70
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 71 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 126
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPL--FPGKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 187 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 70
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 71 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 126
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPL--FPGKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 187 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 42/286 (14%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDA-RRTLREIKLLRHMEHENVIA 105
R +GRG +G V A T + A KK+ + + E K+L + +++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ +T D+ +V +M+ ++ + + + ++ Q++ GL++
Sbjct: 250 LAYAF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNC 219
+H ++++RDLKP N+LL+ +++I D GLA T+ Y T + APELLL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG- 363
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARR 279
EY ++D +++G L E++ A+ G R+ +
Sbjct: 364 EEYDFSVDYFALGVTLYEMI---------------------------AARGPFRARGEKV 396
Query: 280 YVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 324
++L + R + A +P+K S + D E +L DP KR+ +
Sbjct: 397 ENKEL-KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 42/286 (14%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDA-RRTLREIKLLRHMEHENVIA 105
R +GRG +G V A T + A KK+ + + E K+L + +++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 106 IKDIIRPPKKDTFNDVYIVYELMDTD-----LHQIIRSDQQLTDDHCQYFLYQLLRGLKY 160
+ +T D+ +V +M+ ++ + + + ++ Q++ GL++
Sbjct: 250 LAYAF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNC 219
+H ++++RDLKP N+LL+ +++I D GLA T+ Y T + APELLL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG- 363
Query: 220 TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARR 279
EY ++D +++G L E++ A+ G R+ +
Sbjct: 364 EEYDFSVDYFALGVTLYEMI---------------------------AARGPFRARGEKV 396
Query: 280 YVRQLPRCRKQQFATRFPNK-SSGAVDLLEKMLVFDPNKRITVEEA 324
++L + R + A +P+K S + D E +L DP KR+ +
Sbjct: 397 ENKEL-KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 66
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 67 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 122
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPL--FPGKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 66
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 67 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 122
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPL--FPGKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 47 IRPIGRGAYGIVCAA---VNSETREEVAIKKIG-------NAFDNIIDARRTLREIKLLR 96
+ +G G++G+V S VA+K + A D+ I RE+ +
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------REVNAMH 66
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLR 156
++H N+I + ++ P ++ + L+D ++ + + Q+
Sbjct: 67 SLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLSRYAVQVAE 122
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD---FMTEY-VVTRWYRA 212
G+ Y+ S +HRDL NLLL +KIGDFGL R + D M E+ V + A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT--REPL--FPGKDYVHQLRLITELIGSPDD 266
PE L T ++ A D W G L E+ T +EP G +H++ E + P+D
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 47 IRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 102
I +G+G +G V C + T VA+K++ ++ + R REI++L+ + +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDF 73
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKY 160
++ + + P + + +V E + + + + D + LY Q+ +G++Y
Sbjct: 74 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRA 212
+ S +HRDL N+L+ + +KI DFGLA+ +Y V R WY A
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY-A 186
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT 240
PE L + ++ D+WS G +L E+ T
Sbjct: 187 PESLSD-NIFSRQSDVWSFGVVLYELFT 213
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 76 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPE-SLAYNK 186
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G V A +VA+K + + LRE+ +++ + H N++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS--VL 167
+ P + Y+ + LH+ + +QL + Y + +G+ Y+H+ + ++
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-TRWYRAPELLLNCTEYTAAI 226
HRDLK NLL++ +K+ DFGL+R + ++ T + APE+L + +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS- 220
Query: 227 DIWSVGCILGEIMT 240
D++S G IL E+ T
Sbjct: 221 DVYSFGVILWELAT 234
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 47 IRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 102
I +G+G +G V C + T VA+K++ ++ + R REI++L+ + +
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDF 72
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKY 160
++ + + P + + +V E + + + + D + LY Q+ +G++Y
Sbjct: 73 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRA 212
+ S +HRDL N+L+ + +KI DFGLA+ +Y V R WY A
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY-A 185
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT 240
PE L + ++ D+WS G +L E+ T
Sbjct: 186 PESLSD-NIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 47 IRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 102
I +G+G +G V C + T VA+K++ ++ + R REI++L+ + +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDF 85
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKY 160
++ + + P + + +V E + + + + D + LY Q+ +G++Y
Sbjct: 86 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRA 212
+ S +HRDL N+L+ + +KI DFGLA+ +Y V R WY A
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY-A 198
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT 240
PE L + ++ D+WS G +L E+ T
Sbjct: 199 PESLSD-NIFSRQSDVWSFGVVLYELFT 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 76 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE-SLAYNK 186
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 135/341 (39%), Gaps = 88/341 (25%)
Query: 19 GVLTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNA 78
G G ++ N + ++V+S+ +G G G V N T+E+ A+K +
Sbjct: 1 GPHVKSGLQIKKNAIIDDYKVTSQV------LGLGINGKVLQIFNKRTQEKFALKMLQ-- 52
Query: 79 FDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVY-------IVYELMDT- 130
D + RE++L H I I+ D + ++Y IV E +D
Sbjct: 53 -----DCPKARREVEL--HWRASQCPHIVRIV-----DVYENLYAGRKCLLIVMECLDGG 100
Query: 131 DLHQII--RSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNA---SCDLK 185
+L I R DQ T+ + + ++Y+HS ++ HRD+KP NLL + + LK
Sbjct: 101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
Query: 186 IGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLF 245
+ DFG A+ T+ +Y + D+WS+G I+ ++ P F
Sbjct: 161 LTDFGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198
Query: 246 PGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVD 305
H L + SP + R R Q+ FPN V
Sbjct: 199 YSN---HGLAI------SPGMKT-----------------RIRMGQY--EFPNPEWSEVS 230
Query: 306 -----LLEKMLVFDPNKRITVEEALRHPYLQSLHDLNDEPV 341
L+ +L +P +R+T+ E + HP++ + P+
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IG G++G V A +VA+K + + LRE+ +++ + H N++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS--VL 167
+ P + Y+ + LH+ + +QL + Y + +G+ Y+H+ + ++
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV-TRWYRAPELLLNCTEYTAAI 226
HR+LK NLL++ +K+ DFGL+R + T ++ T + APE+L + +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS- 220
Query: 227 DIWSVGCILGEIMT 240
D++S G IL E+ T
Sbjct: 221 DVYSFGVILWELAT 234
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 78 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 188
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 111 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 167
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 168 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 226
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 227 GRSAAVWSLGILL 239
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 77 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 133
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 192
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 193 GRSAAVWSLGILL 205
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 48 RPIGRGAYGIVCAAVNSETREE---VAIK--KIGNAFDNIIDARRTLREIKLLRHMEHEN 102
R +G G +G V V + + E VA+K K DN + + E ++++++H +
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN---KEKFMSEAVIMKNLDHPH 70
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
++ + II ++Y EL H + R+ L + Q+ + + Y+
Sbjct: 71 IVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV---TRWYRAPELLLNC 219
S + +HRD+ N+L+ + +K+GDFGL+R + D+ V +W +PE +N
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW-MSPE-SINF 184
Query: 220 TEYTAAIDIWSVGCILGEIMT--REPLF 245
+T A D+W + EI++ ++P F
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 83 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 193
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 99 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 155
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 156 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 214
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 215 GRSAAVWSLGILL 227
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 78 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 188
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 188
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 48 RPIGRGAYGIVCAAVNSETREE---VAIK--KIGNAFDNIIDARRTLREIKLLRHMEHEN 102
R +G G +G V V + + E VA+K K DN + + E ++++++H +
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN---KEKFMSEAVIMKNLDHPH 86
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
++ + II ++Y EL H + R+ L + Q+ + + Y+
Sbjct: 87 IVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV---TRWYRAPELLLNC 219
S + +HRD+ N+L+ + +K+GDFGL+R + D+ V +W +PE +N
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW-MSPE-SINF 200
Query: 220 TEYTAAIDIWSVGCILGEIMT--REPLF 245
+T A D+W + EI++ ++P F
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 48 RPIGRGAYGIVCAAVNSETREE---VAIK--KIGNAFDNIIDARRTLREIKLLRHMEHEN 102
R +G G +G V V + + E VA+K K DN + + E ++++++H +
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN---KEKFMSEAVIMKNLDHPH 74
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
++ + II ++Y EL H + R+ L + Q+ + + Y+
Sbjct: 75 IVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV---TRWYRAPELLLNC 219
S + +HRD+ N+L+ + +K+GDFGL+R + D+ V +W +PE +N
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW-MSPE-SINF 188
Query: 220 TEYTAAIDIWSVGCILGEIMT--REPLF 245
+T A D+W + EI++ ++P F
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 188
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 91 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 147
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 148 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 206
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 207 GRSAAVWSLGILL 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 77 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 133
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 192
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 193 GRSAAVWSLGILL 205
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 92 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 148
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 207
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 208 GRSAAVWSLGILL 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 83 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY-NK 193
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 92 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 148
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 207
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 208 GRSAAVWSLGILL 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 157/335 (46%), Gaps = 54/335 (16%)
Query: 31 NVYGNLFEVSSKYVPPIRPIGRGAYG---IVCAAVNSETREEVAIKKIGNAFDNIIDARR 87
N+ G+ +V + ++ +G GAYG +V +T + A+K + A I+ +
Sbjct: 43 NLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA--TIVQKAK 100
Query: 88 TLR----EIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQL 142
T E ++L H+ + + T ++++ + ++ +L + ++
Sbjct: 101 TTEHTRTERQVLEHIRQSPFL----VTLHYAFQTETKLHLILDYINGGELFTHLSQRERF 156
Query: 143 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDF 200
T+ Q ++ +++ L+++H +++RD+K N+LL+++ + + DFGL++ ET+
Sbjct: 157 TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 216
Query: 201 MTEYVVTRWYRAPELLLNC-TEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITE 259
++ T Y AP+++ + + A+D WS+G ++ E++T F
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT------------- 263
Query: 260 LIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSG-AVDLLEKMLVFDPNKR 318
+ G + +++ +RR ++ P +P + S A DL++++L+ DP KR
Sbjct: 264 VDGEKNS------QAEISRRILKSEP---------PYPQEMSALAKDLIQRLLMKDPKKR 308
Query: 319 IT-----VEEALRHPYLQSLH--DLNDEPVCPRPF 346
+ +E H + Q ++ DL + V P PF
Sbjct: 309 LGCGPRDADEIKEHLFFQKINWDDLAAKKV-PAPF 342
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 105 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 220
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 257
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q Q L+ L P+ R T EE HP++Q +
Sbjct: 258 QRVSXECQH--------------LIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 91 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 147
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 148 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 206
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 207 GRSAAVWSLGILL 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 124 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 180
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 181 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 239
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 240 GRSAAVWSLGILL 252
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 104 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 219
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 256
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q Q L+ L P+ R T EE HP++Q +
Sbjct: 257 QRVSXECQH--------------LIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 105 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 161
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 162 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 220
Query: 223 TAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVR 282
+ +WS+G +L +++ + F + E+IG + + R
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIG--------------GQVFFR 257
Query: 283 QLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNKRITVEEALRHPYLQSL 333
Q Q L+ L P+ R T EE HP++Q +
Sbjct: 258 QRVSXECQH--------------LIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 83 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 193
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 92 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 148
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 149 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 207
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 208 GRSAAVWSLGILL 220
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 76 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 132
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 133 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 191
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 192 GRSAAVWSLGILL 204
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 119 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 175
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 176 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 234
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 235 GRSAAVWSLGILL 247
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 119 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 175
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 176 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 234
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 235 GRSAAVWSLGILL 247
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 77 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 133
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 134 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 192
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 193 GRSAAVWSLGILL 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 79 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE-SLAYNK 189
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG +G V + VA+K + A+ L+E ++L+ H N++ + +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 110 IRPPKKDTFNDVYIVYELMDT-DLHQIIRSD-QQLTDDHCQYFLYQLLRGLKYVHSASVL 167
+ +YIV EL+ D +R++ +L + G++Y+ S +
Sbjct: 181 CTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 168 HRDLKPSNLLLNASCDLKIGDFGLARTTSE----TDFMTEYVVTRWYRAPELLLNCTEYT 223
HRDL N L+ LKI DFG++R ++ V +W APE LN Y+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPE-ALNYGRYS 293
Query: 224 AAIDIWSVGCILGEIMT 240
+ D+WS G +L E +
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 82 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 192
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 83 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 193
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+ ++ K + ++ IG+G +G V + +VA+K I N A+ L E ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDATAQAFLAEASVMT 54
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQ--LTDDHCQYFLYQ 153
+ H N++ + +I K +YIV E M L +RS + L D F
Sbjct: 55 QLRHSNLVQLLGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 154 LLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 213
+ ++Y+ + +HRDL N+L++ K+ DFGL + S T + V + AP
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--WTAP 168
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMTRE----PLFPGKDYV 251
E L +++ D+WS G +L EI + P P KD V
Sbjct: 169 EALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 104 IRLLDWFERP--DSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCHN 160
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 161 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 219
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 220 GRSAAVWSLGILL 232
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 80 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 190
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 80 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 190
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 227
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY-NK 188
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 217
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 188
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 91 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 201
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 230
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 83 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE-SLAYNK 193
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 75 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 131
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 132 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 190
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 191 GRSAAVWSLGILL 203
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 72 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 129 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 187
Query: 223 TAAIDIWSVGCILGEIM 239
+ +WS+G +L +++
Sbjct: 188 GRSAAVWSLGILLYDMV 204
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHMEH--ENV 103
+G G +G V + + VAIK + + + + + R E+ LL+ + V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHS 163
I + D P D+F + E + DL I L ++ + F +Q+L +++ H+
Sbjct: 72 IRLLDWFERP--DSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 164 ASVLHRDLKPSNLLLNAS-CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEY 222
VLHRD+K N+L++ + +LK+ DFG +T + T++ TR Y PE + +
Sbjct: 129 XGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYH 187
Query: 223 TAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 188 GRSAAVWSLGILL 200
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 52/232 (22%)
Query: 48 RPIGRGAYGIVCAAV-----NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHE 101
+ +G GA+G V A + +VA+K + D+ + + E+K++ + HE
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS-EREALMSELKMMTQLGSHE 109
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSD-QQLTDDHCQY---------- 149
N++ + +Y+++E DL +RS ++ ++D +Y
Sbjct: 110 NIVNLLGACTLS-----GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 150 ------------FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSE 197
F YQ+ +G++++ S +HRDL N+L+ +KI DFGLAR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR---- 220
Query: 198 TDFMTE--YVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
D M++ YVV +W APE L YT D+WS G +L EI +
Sbjct: 221 -DIMSDSNYVVRGNARLPVKW-MAPESLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL----REIKLLRHMEHEN 102
++ IGRGA+G V V + ++V K+ + F+ I + R+I M N
Sbjct: 80 VKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI-----MAFAN 133
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + D + +Y+V E M + S+ + + +++ +++ L +H
Sbjct: 134 SPWVVQLFCAFQDDKY--LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCT 220
S ++HRD+KP N+LL+ LK+ DFG ET + V T Y +PE+L +
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 221 E---YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGS---PDDASL 269
Y D WSVG L E++ + F V I + S P+DA +
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEI 306
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIG---------NAFDNIIDARR 87
+E+ + + IG G++G V + +VA+K + AF N + R
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 88 TLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHC 147
R + +L M + + + + + + +Y +++T I +L D
Sbjct: 60 KTRHVNILLFMGYSTAPQLAIVTQWCEGSS---LYHHLHIIETKFEMI-----KLID--- 108
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY--- 204
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++
Sbjct: 109 --IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 205 VVTRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG 262
+ + APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG 223
Query: 263 ----SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 224 RGYLSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 274
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNII---DARRTLREIKLLR-HMEHEN 102
IR +G+G++G V A ET + A+K + D I+ D T+ E ++L H
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKK--DVILQDDDVECTMTEKRILSLARNHPF 85
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ + + P + ++ V E ++ DL I+ ++ + +++ +++ L ++
Sbjct: 86 LTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTE-YVVTRWYRAPELLLNCT 220
H +++RDLK N+LL+ K+ DFG+ + T + T Y APE+L
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 221 EYTAAIDIWSVGCILGEIMTREPLFPGKD 249
Y A+D W++G +L E++ F ++
Sbjct: 201 -YGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 285 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HR+L N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNK 395
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 432
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 65 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 114
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVT 207
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 115 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 208 RWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG--- 262
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGY 231
Query: 263 -SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 232 LSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 279
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G +G V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q+++ Y Q+ ++Y+
Sbjct: 76 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE-SLAYNK 186
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 61
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 62 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 111
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVT 207
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 112 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 208 RWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG--- 262
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGY 228
Query: 263 -SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 229 LSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 276
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 51 GRGAYGIVCAA-VNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVIAIK 107
G G +G+V VN+ T VA+KK+ D + + +EIK+ +HEN++ +
Sbjct: 31 GEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 108 DIIRPPKKDTFNDVYIVY------ELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+D+ +VY L+D L + + C+ G+ ++
Sbjct: 88 GF-----SSDGDDLCLVYVYXPNGSLLDR-LSCLDGTPPLSWHXRCK-IAQGAANGINFL 140
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLN 218
H +HRD+K +N+LL+ + KI DFGLAR + ++ + V T Y APE L
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG 200
Query: 219 CTEYTAAIDIWSVGCILGEIMTREP 243
E T DI+S G +L EI+T P
Sbjct: 201 --EITPKSDIYSFGVVLLEIITGLP 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 60 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 109
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVT 207
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 110 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 208 RWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG--- 262
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGY 226
Query: 263 -SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 227 LSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 274
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
IGRG++ V +++ET EVA ++ + + +R E + L+ ++H N++ D
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 110 IRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS--VL 167
K V + L ++ + + + Q+L+GL+++H+ + ++
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 168 HRDLKPSNLLLNA-SCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAI 226
HRDLK N+ + + +KIGD GLA T F + T + APE +Y ++
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXYEE--KYDESV 210
Query: 227 DIWSVGCILGEIMTRE 242
D+++ G E T E
Sbjct: 211 DVYAFGXCXLEXATSE 226
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 324 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HR+L N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNK 434
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 463
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 33 YGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREI 92
YG+ +E+ K + ++ +G G +G+V + +VAIK I + + + E
Sbjct: 16 YGS-WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEA 70
Query: 93 KLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QL 142
K++ ++ HE ++ + + + ++I+ E M ++ ++ Q ++
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 143 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETD 199
D C+ ++Y+ S LHRDL N L+N +K+ DFGL+R ET
Sbjct: 126 CKDVCE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS 177
Query: 200 FMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ RW PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 178 SVGSKFPVRW-SPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 60 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 109
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVV 206
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 110 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 207 TRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG-- 262
W APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 170 ILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRG 225
Query: 263 --SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 226 YLSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 274
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 282 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 334
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HR+L N L+ + +K+ DFGL+R + D T + ++ + APE L +
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YNK 392
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKD 249
++ D+W+ G +L EI T P +PG D
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMSP-YPGID 421
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 79
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 80 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 129
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVV 206
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 130 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 207 TRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG-- 262
W APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 190 ILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRG 245
Query: 263 --SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 246 YLSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 294
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 65 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 114
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVT 207
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 115 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 208 RWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG--- 262
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGY 231
Query: 263 -SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 232 LSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 279
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 86
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 87 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 136
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVT 207
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 137 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 208 RWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG--- 262
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGY 253
Query: 263 -SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 254 LSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 301
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 50 IGRGAYGIVCAAV-NSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKD 108
+G+G +G V N TR VAIK + + L+E ++++ + HE ++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 109 IIRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQ-------QLTDDHCQYFLYQLLRGLKY 160
++ + + IV E M L ++ + QL D Q+ G+ Y
Sbjct: 71 VV------SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 119
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT---RWYRAPELLL 217
V + +HRDL+ +N+L+ + K+ DFGLAR + + +W APE L
Sbjct: 120 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL 178
Query: 218 NCTEYTAAIDIWSVGCILGEIMTREPL-FPG 247
+T D+WS G +L E+ T+ + +PG
Sbjct: 179 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 50 IGRGAYGIVCAA---VNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
IG G G VC V + VAIK + + R L E ++ +H N+I +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-QRRDFLSEASIMGQFDHPNIIRL 115
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASV 166
+ ++ + Y+ +DT L D Q T L + G++Y+
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 167 LHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT------RWYRAPELLLNCT 220
+HRDL N+L++++ K+ DFGL+R E D T RW APE + T
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVL-EDDPDAAXTTTGGKIPIRWT-APEAIAFRT 230
Query: 221 EYTAAIDIWSVGCILGEIMT 240
+++A D+WS G ++ E++
Sbjct: 231 -FSSASDVWSFGVVMWEVLA 249
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 88 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 137
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVT 207
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA S ++ +
Sbjct: 138 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 208 RWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG--- 262
+ APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRGY 254
Query: 263 -SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 255 LSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 302
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ + + IG G++G V + +VA+K + + E+ +LR
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 97 HMEHENVIAIKDIIRPPKKDTF------NDVYIVYELMDTDLHQIIRSDQQLTDDHCQYF 150
H N++ P+ + +Y +++T I +L D
Sbjct: 88 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-----KLID-----I 137
Query: 151 LYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLA----RTTSETDFMTEYVV 206
Q +G+ Y+H+ S++HRDLK +N+ L+ +KIGDFGLA R + F
Sbjct: 138 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 207 TRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIG-- 262
W APE+ + + Y+ D+++ G +L E+MT + + + Q I ++G
Sbjct: 198 ILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGRG 253
Query: 263 --SPDDASLGFLRSDNARRYVRQLPRCRKQQFATR--FPNKSSGAVDLLEKML 311
SPD L +RS+ + R + C K++ R FP + +++LL + L
Sbjct: 254 YLSPD---LSKVRSNCPKAMKRLMAECLKKKRDERPLFP-QILASIELLARSL 302
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL----REIKLLRHMEHEN 102
++ IGRGA+G V + TR+ A+K + + F+ I + R+I M N
Sbjct: 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERDI-----MAFAN 127
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + D + +Y+V E M + S+ + + +++ +++ L +H
Sbjct: 128 SPWVVQLFYAFQDDRY--LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCT 220
S +HRD+KP N+LL+ S LK+ DFG ++ + V T Y +PE+L +
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 221 E---YTAAIDIWSVGCILGEIMTREPLF 245
Y D WSVG L E++ + F
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 103/220 (46%), Gaps = 32/220 (14%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIK 93
G +E+ K + ++ +G G +G+V + +VAIK I + + + E K
Sbjct: 1 GGSWEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAK 56
Query: 94 LLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLT 143
++ ++ HE ++ + + + ++I+ E M ++ ++ Q ++
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 144 DDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT- 202
D C+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 112 KDVCE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 203 --EYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 164 RGSKFPVRW-SPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 201
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL----REIKLLRHMEHEN 102
++ IGRGA+G V + TR+ A+K + + F+ I + R+I M N
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERDI-----MAFAN 132
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + D + +Y+V E M + S+ + + +++ +++ L +H
Sbjct: 133 SPWVVQLFYAFQDDRY--LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCT 220
S +HRD+KP N+LL+ S LK+ DFG ++ + V T Y +PE+L +
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 221 E---YTAAIDIWSVGCILGEIMTREPLF 245
Y D WSVG L E++ + F
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL----REIKLLRHMEHEN 102
++ IGRGA+G V + TR+ A+K + + F+ I + R+I M N
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERDI-----MAFAN 132
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+ + + D + +Y+V E M + S+ + + +++ +++ L +H
Sbjct: 133 SPWVVQLFYAFQDDRY--LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM--TEYVVTRWYRAPELLLNCT 220
S +HRD+KP N+LL+ S LK+ DFG ++ + V T Y +PE+L +
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 221 E---YTAAIDIWSVGCILGEIMTREPLF 245
Y D WSVG L E++ + F
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 136/320 (42%), Gaps = 61/320 (19%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IGRGA+G EVA+ K+ NA + + A + L + ++L+ E
Sbjct: 79 LKVIGRGAFG------------EVAVVKLKNA--DKVFAMKILNKWEMLKRAETACFREE 124
Query: 107 KDIIRPPKKD-------TFNDVYIVYELMD----TDLHQII-RSDQQLTDDHCQYFLYQL 154
+D++ F D +Y +MD DL ++ + + +L ++ +++L ++
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 155 LRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--TRWYRA 212
+ + VH +HRD+KP N+L++ + +++ DFG E + V T Y +
Sbjct: 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 213 PELLLNCT----EYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDAS 268
PE+L Y D WS+G + E++ E F + V
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------------- 289
Query: 269 LGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKMLVFDPNK--RITVEEALR 326
Y + + + QF T+ + S A DL+ +++ ++ + +E+ +
Sbjct: 290 -----------YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338
Query: 327 HPYLQSLHDLNDEPVCPRPF 346
HP+ + D ++ C P+
Sbjct: 339 HPFFSGI-DWDNIRNCEAPY 357
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+GRG++G V + +T + A+KK+ ++ R E+ + ++ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 153
Query: 110 IRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+R V I EL++ L Q+++ L +D Y+L Q L GL+Y+HS +LH
Sbjct: 154 VR-----EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 169 RDLKPSNLLLN------ASCDLK----IGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
D+K N+LL+ A CD + GL ++ D++ T + APE++L
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG---TETHMAPEVVLG 265
Query: 219 CTEYTAAIDIWSVGCIL 235
A +D+WS C++
Sbjct: 266 -RSCDAKVDVWSSCCMM 281
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 79 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T ++ + APE L +
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE-SLAYNK 189
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 226
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+G G YG V V + VA+K + ++ ++ L+E +++ ++H N++ + +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 110 I--RPPKKDTFNDVYIVYELMD-TDLHQIIR--SDQQLTDDHCQYFLYQLLRGLKYVHSA 164
PP YI+ E M +L +R + Q++ Y Q+ ++Y+
Sbjct: 80 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
+ +HRDL N L+ + +K+ DFGL+R + D T ++ + APE L +
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE-SLAYNK 190
Query: 222 YTAAIDIWSVGCILGEIMT--REPLFPGKDYVHQLRLI 257
++ D+W+ G +L EI T P +PG D L+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+GRG++G V + +T + A+KK+ ++ R E+ + ++ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 134
Query: 110 IRPPKKDTFNDVYIVYELMDT-DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+R V I EL++ L Q+++ L +D Y+L Q L GL+Y+HS +LH
Sbjct: 135 VR-----EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 169 RDLKPSNLLLNA-SCDLKIGDFGLARTTSE----TDFMT-EYV-VTRWYRAPELLLNCTE 221
D+K N+LL++ + DFG A D +T +Y+ T + APE++L
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG-RS 248
Query: 222 YTAAIDIWSVGCIL 235
A +D+WS C++
Sbjct: 249 CDAKVDVWSSCCMM 262
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%), Gaps = 33/221 (14%)
Query: 33 YGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREI 92
YG+ +E+ K + ++ +G G +G+V + +VAIK I + + + E
Sbjct: 7 YGS-WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEA 61
Query: 93 KLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QL 142
K++ ++ HE ++ + + + ++I+ E M ++ ++ Q ++
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEM 116
Query: 143 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 202
D C+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 117 CKDVCE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 168
Query: 203 EY---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 169 SVGSKFPVRW-SPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 108/220 (49%), Gaps = 30/220 (13%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLR-EIKLL 95
+E+ + V IG G++G V + +VA+K I D + + R E+ +L
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKG---KWHGDVAVK-ILKVVDPTPEQFQAFRNEVAVL 86
Query: 96 RHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQQLTDDHCQYFLYQL 154
R H N++ + T +++ IV + + + L++ L ++ ++QL
Sbjct: 87 RKTRHVNILLFMGYM------TKDNLAIVTQWCEGSSLYK------HLHVQETKFQMFQL 134
Query: 155 L-------RGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSE---TDFMTEY 204
+ +G+ Y+H+ +++HRD+K +N+ L+ +KIGDFGLA S + + +
Sbjct: 135 IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQP 194
Query: 205 VVTRWYRAPEL--LLNCTEYTAAIDIWSVGCILGEIMTRE 242
+ + APE+ + + ++ D++S G +L E+MT E
Sbjct: 195 TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 33 YGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREI 92
YG+ +E+ K + ++ +G G +G+V + +VAIK I + + + E
Sbjct: 16 YGS-WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEA 70
Query: 93 KLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QL 142
K++ ++ HE ++ + + + ++I+ E M ++ ++ Q ++
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 143 TDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT 202
D C+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 126 CKDVCE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177
Query: 203 EY---VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW +P +L +++++ DIW+ G ++ EI +
Sbjct: 178 SVGSKFPVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ K + ++ +G G +G+V + +VAIK I + + + E K++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 58
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDH 146
++ HE ++ + + + ++I+ E M ++ ++ Q ++ D
Sbjct: 59 NLSHEKLVQLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 113
Query: 147 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY-- 204
C+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 114 CE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 165
Query: 205 -VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 166 KFPVRW-SPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 37 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR 96
+E+ K + ++ +G G +G+V + +VAIK I + + + E K++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 59
Query: 97 HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDH 146
++ HE ++ + + + ++I+ E M ++ ++ Q ++ D
Sbjct: 60 NLSHEKLVQLYGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 147 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY-- 204
C+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 115 CE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 166
Query: 205 -VVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
RW PE+L+ +++++ DIW+ G ++ EI +
Sbjct: 167 KFPVRW-SPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 48/230 (20%)
Query: 48 RPIGRGAYGIVCAAVNSETREEVAIKKIG----NAFDNIIDARRTLREIKLLRHM-EHEN 102
+ +G GA+G V A +E A+ K+ + + + + E+K++ H+ +HEN
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIR--------------SDQQLTDDH-- 146
++ + Y Y DL +R D + D
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCY----GDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 147 -------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD 199
+F Q+ +G+ ++ S + +HRD+ N+LL KIGDFGLAR D
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----D 207
Query: 200 FM--TEYVV-------TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
M + Y+V +W APE + +C YT D+WS G +L EI +
Sbjct: 208 IMNDSNYIVKGNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 255
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 139 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 198
++ LT F +Q+ +G++Y+ S++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 199 DFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
D + + +W L + YT D+WS G +L EI+T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 206
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 224
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + NC YT D+WS G L E+ +
Sbjct: 225 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 260
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 39/263 (14%)
Query: 34 GNLFEVSSKYVPPIRPIGRGAYGIV-----CAAVNSETREEVAIKKIGNAFDNIIDARRT 88
G L E+S V + +G +G V E + VAIK + + + + R
Sbjct: 1 GKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL--REE 58
Query: 89 LREIKLLR-HMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQII-----RSDQQL 142
R +LR ++H NV+ + ++ KD + Y DLH+ + SD
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVV---TKDQPLSMIFSY-CSHGDLHEFLVMRSPHSDVGS 114
Query: 143 TDDH-----------CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
TDD + + Q+ G++Y+ S V+H+DL N+L+ ++KI D GL
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 192 ARTTSETDFM----TEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR--EPL- 244
R D+ + RW APE ++ +++ DIWS G +L E+ + +P
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWM-APEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
Query: 245 -FPGKDYVHQLRLITELIGSPDD 266
+ +D V +R +++ PDD
Sbjct: 233 GYSNQDVVEMIR-NRQVLPCPDD 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 206
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 222
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + NC YT D+WS G L E+ +
Sbjct: 223 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 258
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+GRG++G V + +T + A+KK+ ++ R + E+ + ++ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 134
Query: 110 IRP-PKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+R P + F ++ L L Q+I+ L +D Y+L Q L GL+Y+H+ +LH
Sbjct: 135 VREGPWVNIFMEL-----LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 169 RDLKPSNLLLN------ASCD----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
D+K N+LL+ A CD L + GL ++ D++ T + APE+++
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMG 246
Query: 219 CTEYTAAIDIWSVGCIL 235
A +DIWS C++
Sbjct: 247 -KPCDAKVDIWSSCCMM 262
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 206
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 229
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + NC YT D+WS G L E+ +
Sbjct: 230 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 265
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 50 IGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENV 103
+G GA+G V A + + + VA+K + A ++ AR+ RE +LL ++H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHI 76
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRS---DQQLTDD------------HC 147
+ + + + +V+E M DL++ +RS D +L
Sbjct: 77 VRFFGVCTEGRP-----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TE 203
Q+ G+ Y+ +HRDL N L+ +KIGDFG++R TD+
Sbjct: 132 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 245
+ RW PE +L ++T D+WS G +L EI T ++P +
Sbjct: 192 MLPIRWM-PPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 50 IGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENV 103
+G GA+G V A + + + VA+K + A ++ AR+ RE +LL ++H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHI 105
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRS---DQQLTDD------------HC 147
+ + + + +V+E M DL++ +RS D +L
Sbjct: 106 VRFFGVCTEGRP-----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TE 203
Q+ G+ Y+ +HRDL N L+ +KIGDFG++R TD+
Sbjct: 161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 245
+ RW PE +L ++T D+WS G +L EI T ++P +
Sbjct: 221 MLPIRWM-PPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+GRG++G V + +T + A+KK+ ++ R + E+ + ++ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 118
Query: 110 IR-PPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+R P + F ++ L L Q+I+ L +D Y+L Q L GL+Y+H+ +LH
Sbjct: 119 VREGPWVNIFMEL-----LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 169 RDLKPSNLLLN------ASCD----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
D+K N+LL+ A CD L + GL ++ D++ T + APE+++
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMG 230
Query: 219 CTEYTAAIDIWSVGCIL 235
A +DIWS C++
Sbjct: 231 -KPCDAKVDIWSSCCMM 246
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 47 IRPIGRGAYGIV--CA--AVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHEN 102
I +G+G +G V C + T VA+K++ ++ + R REI++L+ + +
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD--QQRDFQREIQILKALHSDF 69
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLY--QLLRGLKY 160
++ + + P + ++ +V E + + + + D + LY Q+ +G++Y
Sbjct: 70 IVKYRGVSYGPGRP---ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 161 VHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTR--------WYRA 212
+ S +HRDL N+L+ + +KI DFGLA+ + V R WY A
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDXXVVREPGQSPIFWY-A 182
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMT 240
PE L + ++ D+WS G +L E+ T
Sbjct: 183 PESLSD-NIFSRQSDVWSFGVVLYELFT 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 50 IGRGAYGIVCAA-----VNSETREEVAIKKIGNAFDNIIDARRTL-REIKLLRHMEHENV 103
+G GA+G V A + + + VA+K + A ++ AR+ RE +LL ++H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHI 82
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRS---DQQLTDD------------HC 147
+ + + + +V+E M DL++ +RS D +L
Sbjct: 83 VRFFGVCTEGRP-----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 148 QYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TE 203
Q+ G+ Y+ +HRDL N L+ +KIGDFG++R TD+
Sbjct: 138 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 204 YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT--REPLF 245
+ RW PE +L ++T D+WS G +L EI T ++P +
Sbjct: 198 MLPIRWM-PPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 206
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGN 206
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + NC YT D+WS G L E+ +
Sbjct: 207 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVV--- 206
F YQ+ +G+ ++ S + +HRDL N+LL KI DFGLAR + YVV
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND---SNYVVKGN 229
Query: 207 ----TRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+W APE + NC YT D+WS G L E+ +
Sbjct: 230 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFS 265
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDI 109
+GRG++G V + +T + A+KK+ ++ R + E+ + ++ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 132
Query: 110 IR-PPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLH 168
+R P + F ++ L L Q+I+ L +D Y+L Q L GL+Y+H+ +LH
Sbjct: 133 VREGPWVNIFMEL-----LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 169 RDLKPSNLLLN------ASCD----LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLN 218
D+K N+LL+ A CD L + GL ++ D++ T + APE+++
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---TETHMAPEVVMG 244
Query: 219 CTEYTAAIDIWSVGCIL 235
A +DIWS C++
Sbjct: 245 -KPCDAKVDIWSSCCMM 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 48 RPIGRGAYGIVCAAVNSE---TREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVI 104
R +G+G +G V A + + +VA+K + D LRE ++ +H +V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 105 AIKDI-IRPPKKDTFNDVYIVYELMD-TDLHQIIRSDQ------QLTDDHCQYFLYQLLR 156
+ + +R K ++ M DLH + + + L F+ +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVT----RWYRA 212
G++Y+ S + +HRDL N +L + + DFGL+R D+ + + +W
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 213 PELLLNCTEYTAAIDIWSVGCILGEIMTR 241
L N YT D+W+ G + EIMTR
Sbjct: 209 ESLADNL--YTVHSDVWAFGVTMWEIMTR 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVI 104
I+ IGRGA+G V A V + E + KI N ++ + A E +L + + + +
Sbjct: 79 IKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 137
Query: 105 AIKDIIRPPKKDTFNDVYIVYEL-MDTDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVH 162
A+ + N +Y+V + + DL ++ + + +L +D ++++ +++ + +H
Sbjct: 138 ALHYAFQDE-----NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFG--LARTTSETDFMTEYVVTRWYRAPELLL--- 217
+HRD+KP N+LL+ + +++ DFG L T + V T Y +PE+L
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 218 -NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 251
+Y D WS+G + E++ E F + V
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL--REIKLLRHMEHENVI 104
I+ IGRGA+G V A V + E + KI N ++ + A E +L + + + +
Sbjct: 95 IKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 153
Query: 105 AIKDIIRPPKKDTFNDVYIVYEL-MDTDLHQII-RSDQQLTDDHCQYFLYQLLRGLKYVH 162
A+ + N +Y+V + + DL ++ + + +L +D ++++ +++ + +H
Sbjct: 154 ALHYAFQDE-----NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFG--LARTTSETDFMTEYVVTRWYRAPELLL--- 217
+HRD+KP N+LL+ + +++ DFG L T + V T Y +PE+L
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 218 -NCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 251
+Y D WS+G + E++ E F + V
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 50 IGRGAYGIVCAAVNSETREE--VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
+G G +G V V +++ VAIK + + D +RE +++ +++ ++ +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLI 76
Query: 108 DIIRPPKKDTFNDVYIVYELMDTD-LHQ-IIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ + + +V E+ LH+ ++ +++ + L+Q+ G+KY+ +
Sbjct: 77 GVCQA------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD-FMTEYVVTRW---YRAPELLLNCTE 221
+HRDL N+LL KI DFGL++ D + T +W + APE +N +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRK 189
Query: 222 YTAAIDIWSVGCILGEIMT 240
+++ D+WS G + E ++
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 139 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 198
++ LT F +Q+ +G++Y+ ++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 199 DFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
D + + +W L + YT D+WS G +L EI+T
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 133/319 (41%), Gaps = 56/319 (17%)
Query: 31 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRT 88
N+Y V + ++ IG G V +N E ++ AIK + A + +D+ R
Sbjct: 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN 75
Query: 89 LREIKLLRHMEH--ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH 146
EI L ++ + +I + D + T +Y+V E + DL+ ++ + +
Sbjct: 76 --EIAYLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE 128
Query: 147 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTE 203
+ + +L + +H ++H DLKP+N L+ LK+ DFG+A + +
Sbjct: 129 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 187
Query: 204 YVVTRWYRAPELLLNCTE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 253
V T Y PE + + + + D+WS+GCIL + + P + ++Q
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQ 245
Query: 254 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLV 312
+ + +I P+ FP+ + D+L+ L
Sbjct: 246 ISKLHAII-DPN--------------------------HEIEFPDIPEKDLQDVLKCCLK 278
Query: 313 FDPNKRITVEEALRHPYLQ 331
DP +RI++ E L HPY+Q
Sbjct: 279 RDPKQRISIPELLAHPYVQ 297
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 139 DQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSET 198
++ LT F +Q+ +G++Y+ ++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 199 DFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
D + + +W L + YT D+WS G +L EI+T
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 50 IGRGAYGIVCAAVNSETREE--VAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIK 107
+G G +G V V +++ VAIK + + D +RE +++ +++ ++ +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLI 402
Query: 108 DIIRPPKKDTFNDVYIVYELMDTD-LHQ-IIRSDQQLTDDHCQYFLYQLLRGLKYVHSAS 165
+ + + +V E+ LH+ ++ +++ + L+Q+ G+KY+ +
Sbjct: 403 GVCQA------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 166 VLHRDLKPSNLLLNASCDLKIGDFGLARTTSETD-FMTEYVVTRW---YRAPELLLNCTE 221
+HR+L N+LL KI DFGL++ D + T +W + APE +N +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRK 515
Query: 222 YTAAIDIWSVGCILGEIMT 240
+++ D+WS G + E ++
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ +G G +G+V + +VAIK I + + + E K++ ++ HE ++ +
Sbjct: 9 LKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 107 KDIIRPPKKDTFNDVYIVYELMDT--------DLHQIIRSDQ--QLTDDHCQYFLYQLLR 156
+ + ++I+ E M ++ ++ Q ++ D C+
Sbjct: 65 YGVCTKQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE-------- 111
Query: 157 GLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEY---VVTRWYRAP 213
++Y+ S LHRDL N L+N +K+ DFGL+R + ++ + RW P
Sbjct: 112 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPP 170
Query: 214 ELLLNCTEYTAAIDIWSVGCILGEIMT 240
E+L+ +++++ DIW+ G ++ EI +
Sbjct: 171 EVLMY-SKFSSKSDIWAFGVLMWEIYS 196
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 131/319 (41%), Gaps = 56/319 (17%)
Query: 31 NVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRT 88
N+Y V + ++ IG G V +N E ++ AIK + A + +D+ R
Sbjct: 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN 75
Query: 89 LREIKLLRHMEH--ENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDH 146
EI L ++ + +I + D + T +Y+V E + DL+ ++ + +
Sbjct: 76 --EIAYLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE 128
Query: 147 CQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMT---E 203
+ + +L + +H ++H DLKP+N L+ LK+ DFG+A
Sbjct: 129 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDS 187
Query: 204 YVVTRWYRAPELLLNCTE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ 253
V T Y PE + + + + D+WS+GCIL + + P + ++Q
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQ 245
Query: 254 LRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLV 312
+ + +I P+ FP+ + D+L+ L
Sbjct: 246 ISKLHAII-DPN--------------------------HEIEFPDIPEKDLQDVLKCCLK 278
Query: 313 FDPNKRITVEEALRHPYLQ 331
DP +RI++ E L HPY+Q
Sbjct: 279 RDPKQRISIPELLAHPYVQ 297
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 34/242 (14%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLR-HMEHENVIAIKD 108
G+ G + E + VAIK + + + + R R +LR ++H NV+ +
Sbjct: 39 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL--REEFRHEAMLRARLQHPNVVCLLG 96
Query: 109 IIRPPKKDTFNDVYIVYELMDTDLHQII-----RSDQQLTDDH-----------CQYFLY 152
++ KD + Y DLH+ + SD TDD + +
Sbjct: 97 VV---TKDQPLSMIFSY-CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 153 QLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFM----TEYVVTR 208
Q+ G++Y+ S V+H+DL N+L+ ++KI D GL R D+ + R
Sbjct: 153 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 212
Query: 209 WYRAPELLLNCTEYTAAIDIWSVGCILGEIMTR--EPL--FPGKDYVHQLRLITELIGSP 264
W APE ++ +++ DIWS G +L E+ + +P + +D V +R +++ P
Sbjct: 213 WM-APEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-NRQVLPCP 269
Query: 265 DD 266
DD
Sbjct: 270 DD 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 50 IGRGAYGIVCAAVNSETREEVAIKKIGN----AFDNIIDARRTLREIKLLRHME----HE 101
+G+G +G V A R +VAIK I + + D+ E+ LL + H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 102 NVIAIKDIIRPPKKDTFNDVYIVYE--LMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLK 159
VI + D +T +V E L DL I L + + F Q++ ++
Sbjct: 99 GVIRLLDWF-----ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 160 YVHSASVLHRDLKPSNLL--LNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLL 217
+ HS V+HRD+K N+L L C K+ DFG + + T++ TR Y PE +
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGC-AKLIDFGSGALLHDEPY-TDFDGTRVYSPPEWIS 211
Query: 218 NCTEYTAAIDIWSVGCIL 235
+ +WS+G +L
Sbjct: 212 RHQYHALPATVWSLGILL 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 26/241 (10%)
Query: 19 GVLTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNA 78
G L Q + G E+ + R + G + V A + + E A+K++ +
Sbjct: 5 GSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN 64
Query: 79 FDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFN---DVYIVYELMDTDLHQ 134
+ R ++E+ ++ + H N++ K+++ + ++ EL L +
Sbjct: 65 EEE--KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122
Query: 135 IIR---SDQQLTDDHCQYFLYQLLRGLKYVHSAS--VLHRDLKPSNLLLNASCDLKIGDF 189
++ S L+ D YQ R ++++H ++HRDLK NLLL+ +K+ DF
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182
Query: 190 GLARTTS---------ETDFMTEYVVTR----WYRAPELLLNCTEYTAA--IDIWSVGCI 234
G A T S + + E +TR YR PE++ + + DIW++GCI
Sbjct: 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242
Query: 235 L 235
L
Sbjct: 243 L 243
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 200
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 201 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 255 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 200
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 201 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 257 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 200
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 201 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 250 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 142 LTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTT-SETDF 200
LT +H + +Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR + D+
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 201 MTE---YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
+ + + +W APE + + YT D+WS G +L EI +
Sbjct: 248 VRKGDARLPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFS 288
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 127/323 (39%), Gaps = 56/323 (17%)
Query: 31 NVY--GNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRT 88
N+Y G++ + +K+ I+ +G G + V A+K+I D
Sbjct: 16 NLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEA 73
Query: 89 LREIKLLRHMEHENVIAIKDII---RPPKKDTFNDV-YIVYELMDTDLHQIIRSDQQLTD 144
RE + R H N++ + R K + + + + + ++ ++ LT+
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 145 DHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL-------ARTTSE 197
D + L + RGL+ +H+ HRDLKP+N+LL + D G + +
Sbjct: 134 DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ 193
Query: 198 TDFMTEYVVTRW---YRAPELL---LNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYV 251
+ ++ R YRAPEL +C D+WS+GC+L +M E
Sbjct: 194 ALTLQDWAAQRCTISYRAPELFSVQSHCV-IDERTDVWSLGCVLYAMMFGE--------- 243
Query: 252 HQLRLITELIGSPDDASLGFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAVDLLEKML 311
P D + F + D+ V + Q + P SS LL M+
Sbjct: 244 -----------GPYD--MVFQKGDSVALAV------QNQLSIPQSPRHSSALWQLLNSMM 284
Query: 312 VFDPNKR------ITVEEALRHP 328
DP++R ++ EAL+ P
Sbjct: 285 TVDPHQRPHIPLLLSQLEALQPP 307
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + + D L
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSE-QDELDFL 96
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 146
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 207 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 265 SNQEVLEFVT 274
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAI 106
++ IG G +G+V +++VAIK I + + + E +++ + H ++ +
Sbjct: 12 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 107 KDIIRPPKKDTFNDVYIVYELMDTD-LHQIIRSDQQL-TDDHCQYFLYQLLRGLKYVHSA 164
+ + +V+E M+ L +R+ + L + + G+ Y+ A
Sbjct: 68 YGVCLEQAP-----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 165 SVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW---YRAPELLLNCTE 221
SV+HRDL N L+ + +K+ DFG+ R + + T T++ + +PE + + +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPE-VFSFSR 180
Query: 222 YTAAIDIWSVGCILGEIMT 240
Y++ D+WS G ++ E+ +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 56/303 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEH--EN 102
++ IG G V +N E ++ AIK + A + +D+ R EI L ++ +
Sbjct: 14 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQHSDK 70
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+I + D + T +Y+V E + DL+ ++ + + + + +L + +H
Sbjct: 71 IIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNC 219
++H DLKP+N L+ LK+ DFG+A + + V T Y PE + +
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 220 TE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL 269
+ + D+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---- 237
Query: 270 GFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHP 328
FP+ + D+L+ L DP +RI++ E L HP
Sbjct: 238 ----------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275
Query: 329 YLQ 331
Y+Q
Sbjct: 276 YVQ 278
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 56/303 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEH--EN 102
++ IG G V +N E ++ AIK + A + +D+ R EI L ++ +
Sbjct: 13 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQHSDK 69
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+I + D + T +Y+V E + DL+ ++ + + + + +L + +H
Sbjct: 70 IIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNC 219
++H DLKP+N L+ LK+ DFG+A + + V T Y PE + +
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 220 TE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL 269
+ + D+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---- 236
Query: 270 GFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHP 328
FP+ + D+L+ L DP +RI++ E L HP
Sbjct: 237 ----------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 274
Query: 329 YLQ 331
Y+Q
Sbjct: 275 YVQ 277
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 456 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 515
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 516 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 131 DLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNAS-CDLKIGDF 189
DL I L ++ + F +Q+L +++ H+ VLHRD+K N+L++ + +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 190 GLARTTSETDFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIM 239
G +T + T++ TR Y PE + + + +WS+G +L +++
Sbjct: 203 GSGALLKDTVY-TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 457 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 516
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 517 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 56/303 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEH--EN 102
++ IG G V +N E ++ AIK + A + +D+ R EI L ++ +
Sbjct: 17 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQHSDK 73
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+I + D + T +Y+V E + DL+ ++ + + + + +L + +H
Sbjct: 74 IIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLARTT---SETDFMTEYVVTRWYRAPELLLNC 219
++H DLKP+N L+ LK+ DFG+A + + V T Y PE + +
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 220 TE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL 269
+ + D+WS+GCIL + + P + ++Q+ + +I P+
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPN---- 240
Query: 270 GFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHP 328
FP+ + D+L+ L DP +RI++ E L HP
Sbjct: 241 ----------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 278
Query: 329 YLQ 331
Y+Q
Sbjct: 279 YVQ 281
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 112 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 171
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 172 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIK---KIGNAFDNIIDARRTLREIKLLRHMEHENV 103
++ +G GA+G V + E V I KI N + E ++ M+H ++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ + + P + +V +LM L + + + Q+ +G+ Y+
Sbjct: 80 VRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMTE--YVVTRWYRAPELLL 217
++HRDL N+L+ + +KI DFGLAR E ++ + + +W + L
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW-----MAL 188
Query: 218 NCTEY---TAAIDIWSVGCILGEIMTREPLFPGKDY 250
C Y T D+WS G + E+MT F GK Y
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT----FGGKPY 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIK---KIGNAFDNIIDARRTLREIKLLRHMEHENV 103
++ +G GA+G V + E V I KI N + E ++ M+H ++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 104 IAIKDIIRPPKKDTFNDVYIVYELMDTD--LHQIIRSDQQLTDDHCQYFLYQLLRGLKYV 161
+ + + P + +V +LM L + + + Q+ +G+ Y+
Sbjct: 103 VRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 162 HSASVLHRDLKPSNLLLNASCDLKIGDFGLAR--TTSETDFMTE--YVVTRWYRAPELLL 217
++HRDL N+L+ + +KI DFGLAR E ++ + + +W + L
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW-----MAL 211
Query: 218 NCTEY---TAAIDIWSVGCILGEIMTREPLFPGKDY 250
C Y T D+WS G + E+MT F GK Y
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT----FGGKPY 243
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 56/303 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEH--EN 102
++ IG G V +N E ++ AIK + A + +D+ R EI L ++ +
Sbjct: 61 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQHSDK 117
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+I + D + T +Y+V E + DL+ ++ + + + + +L + +H
Sbjct: 118 IIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNC 219
++H DLKP+N L+ LK+ DFG+A + + + V T Y PE + +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 220 TE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL 269
+ + D+WS+GCIL + + P + ++Q+ + +I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDP------ 283
Query: 270 GFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHP 328
FP+ + D+L+ L DP +RI++ E L HP
Sbjct: 284 ---------------------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322
Query: 329 YLQ 331
Y+Q
Sbjct: 323 YVQ 325
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 104 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 163
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 164 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 56/303 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEH--EN 102
++ IG G V +N E ++ AIK + A + +D+ R EI L ++ +
Sbjct: 61 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQHSDK 117
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+I + D + T +Y+V E + DL+ ++ + + + + +L + +H
Sbjct: 118 IIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLA---RTTSETDFMTEYVVTRWYRAPELLLNC 219
++H DLKP+N L+ LK+ DFG+A + + + V T Y PE + +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 220 TE----------YTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL 269
+ + D+WS+GCIL + + F + ++Q+ + +I P+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPN---- 284
Query: 270 GFLRSDNARRYVRQLPRCRKQQFATRFPN-KSSGAVDLLEKMLVFDPNKRITVEEALRHP 328
FP+ D+L+ L DP +RI++ E L HP
Sbjct: 285 ----------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322
Query: 329 YLQ 331
Y+Q
Sbjct: 323 YVQ 325
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 158 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 154 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 132 LHQIIRSDQQLTDDHCQYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGL 191
L++ ++ ++ + D + ++Q+ G+KY+ ++ +HRDL N+LL KI DFGL
Sbjct: 92 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 151
Query: 192 ARTT-SETDFMTEYVVTRW---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT 240
++ ++ ++ +W + APE +N ++++ D+WS G ++ E +
Sbjct: 152 SKALRADENYYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 150 FLYQLLRGLKYVHSASVLHRDLKPSNLLLNASCDLKIGDFGLARTTSETDFMTEYVVTRW 209
+ +Q+ RG++++ S +HRDL N+LL+ + +KI DFGLAR + TR
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 210 ---YRAPELLLNCTEYTAAIDIWSVGCILGEIMT-REPLFPG----KDYVHQLR 255
+ APE + + Y+ D+WS G +L EI + +PG +D+ +LR
Sbjct: 264 PLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 96
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ + H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 97 MEALIISKLNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 146
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 207 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 265 SNQEVLEFVT 274
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 82
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ + H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 83 MEALIISKLNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 132
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 193 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 251 SNQEVLEFVT 260
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 47 IRPIGRGAYGIVCAAVNSETREEVAIKKIG--NAFDNIIDARRTLREIKLLRHMEH--EN 102
++ IG G V +N E ++ AIK + A + +D+ R EI L ++ +
Sbjct: 61 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQHSDK 117
Query: 103 VIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIIRSDQQLTDDHCQYFLYQLLRGLKYVH 162
+I + D + T +Y+V E + DL+ ++ + + + + +L + +H
Sbjct: 118 IIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 163 SASVLHRDLKPSNLLLNASCDLKIGDFGLAR-----TTS--------ETDFMTEYVVTRW 209
++H DLKP+N L+ LK+ DFG+A TTS ++M +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 210 YRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASL 269
+ E + ++ + D+WS+GCIL + + F + ++Q+ + +I P+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPN---- 284
Query: 270 GFLRSDNARRYVRQLPRCRKQQFATRFPNKSSGAV-DLLEKMLVFDPNKRITVEEALRHP 328
FP+ + D+L+ L DP +RI++ E L HP
Sbjct: 285 ----------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322
Query: 329 YLQ 331
Y+Q
Sbjct: 323 YVQ 325
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 73
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 74 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 123
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 184 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 241
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 242 SNQEVLEFVT 251
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 98
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 99 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 148
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 209 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 266
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 267 SNQEVLEFVT 276
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 96
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILMELMAGGDLKSFLRETRPRP 146
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 207 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 265 SNQEVLEFVT 274
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 82
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 132
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 193 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 251 SNQEVLEFVT 260
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 88
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 89 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 138
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 139 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 199 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 256
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 257 SNQEVLEFVT 266
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 81
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILMELMAGGDLKSFLRETRPRP 131
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 192 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 250 SNQEVLEFVT 259
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 108
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 109 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 158
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 159 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 219 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 276
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 277 SNQEVLEFVT 286
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 35 NLFEVSSKYVPPIRPIGRGAY-----GIVCAAVNSETREEVAIKKIGNAFDNIIDARRTL 89
+L EV K + IR +G GA+ G V N + +VA+K + D L
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFL 81
Query: 90 REIKLLRHMEHENV-----IAIKDIIRPPKKDTFNDVYIVYELM-DTDLHQIIRSDQQLT 143
E ++ H+N+ ++++ + R +I+ ELM DL +R +
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPR----------FILLELMAGGDLKSFLRETRPRP 131
Query: 144 DDHCQYFLYQLLR-------GLKYVHSASVLHRDLKPSNLLLNASCD---LKIGDFGLAR 193
+ LL G +Y+ +HRD+ N LL KIGDFG+AR
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
Query: 194 TTSETDFMTE----YVVTRWYRAPELLLNCTEYTAAIDIWSVGCILGEIMTREPL-FPGK 248
+ + + +W PE + +T+ D WS G +L EI + + +P K
Sbjct: 192 DIYRASYYRKGGCAMLPVKWM-PPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
Query: 249 DYVHQLRLIT 258
L +T
Sbjct: 250 SNQEVLEFVT 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,327,996
Number of Sequences: 62578
Number of extensions: 470834
Number of successful extensions: 4170
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 938
Number of HSP's gapped (non-prelim): 1331
length of query: 377
length of database: 14,973,337
effective HSP length: 100
effective length of query: 277
effective length of database: 8,715,537
effective search space: 2414203749
effective search space used: 2414203749
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)