Query 017086
Match_columns 377
No_of_seqs 148 out of 1492
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:42:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017086hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.3E-81 4.4E-86 603.9 22.8 369 6-377 4-422 (427)
2 3qb0_A Actin-related protein 4 100.0 2.1E-79 7E-84 593.4 27.0 366 3-377 19-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 3.1E-77 1.1E-81 568.9 31.0 374 4-377 2-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 2.1E-76 7.3E-81 566.0 15.8 372 3-374 2-388 (394)
5 4fo0_A Actin-related protein 8 100.0 1.1E-72 3.7E-77 569.0 22.4 370 7-377 15-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 4.6E-71 1.6E-75 534.3 27.8 370 5-376 3-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 1.3E-59 4.3E-64 457.7 25.3 362 5-377 38-652 (655)
8 1jce_A ROD shape-determining p 100.0 1.6E-36 5.6E-41 285.4 18.1 307 8-355 4-330 (344)
9 2v7y_A Chaperone protein DNAK; 99.9 9.4E-27 3.2E-31 229.4 6.6 297 8-351 3-350 (509)
10 1dkg_D Molecular chaperone DNA 99.9 8E-25 2.7E-29 208.6 11.3 304 8-351 3-381 (383)
11 3h1q_A Ethanolamine utilizatio 99.9 3.2E-24 1.1E-28 194.8 14.4 244 7-349 28-272 (272)
12 3qfu_A 78 kDa glucose-regulate 99.9 1.4E-24 4.7E-29 207.7 10.3 299 7-351 18-392 (394)
13 3i33_A Heat shock-related 70 k 99.9 4.4E-23 1.5E-27 197.9 9.7 302 6-351 22-400 (404)
14 2kho_A Heat shock protein 70; 99.8 3.1E-21 1.1E-25 193.4 13.0 297 8-351 3-381 (605)
15 1yuw_A Heat shock cognate 71 k 99.8 7.7E-21 2.6E-25 188.8 15.3 216 102-351 139-379 (554)
16 3d2f_A Heat shock protein homo 99.8 8E-21 2.7E-25 192.0 10.7 214 102-351 138-382 (675)
17 4gni_A Putative heat shock pro 99.8 1.1E-20 3.8E-25 181.5 8.4 238 82-352 129-401 (409)
18 4b9q_A Chaperone protein DNAK; 99.8 1.7E-19 5.9E-24 180.8 8.4 301 8-351 3-381 (605)
19 2ych_A Competence protein PILM 99.7 1E-17 3.5E-22 159.0 13.2 172 118-320 153-331 (377)
20 2fsj_A Hypothetical protein TA 99.7 2.4E-18 8.2E-23 161.1 5.4 177 9-197 23-239 (346)
21 4a2a_A Cell division protein F 99.7 3.4E-16 1.1E-20 149.8 13.7 200 115-352 167-394 (419)
22 2zgy_A Plasmid segregation pro 99.6 5.4E-15 1.9E-19 137.0 8.1 288 9-350 2-320 (320)
23 4apw_A ALP12; actin-like prote 99.5 1.2E-14 4.2E-19 134.9 2.6 288 3-351 3-324 (329)
24 3js6_A Uncharacterized PARM pr 99.4 7.4E-14 2.5E-18 130.7 4.7 185 8-198 5-232 (355)
25 2d0o_A DIOL dehydratase-reacti 98.9 1.9E-09 6.3E-14 102.8 7.3 180 138-348 390-601 (610)
26 1nbw_A Glycerol dehydratase re 98.9 2.3E-09 8E-14 102.5 7.4 181 138-348 392-603 (607)
27 4ehu_A Activator of 2-hydroxyi 98.5 5E-08 1.7E-12 88.0 4.2 52 292-351 203-254 (276)
28 1hux_A Activator of (R)-2-hydr 97.5 0.00015 5E-09 64.9 7.1 47 297-351 210-256 (270)
29 1t6c_A Exopolyphosphatase; alp 96.6 0.0022 7.5E-08 58.4 5.4 75 114-191 95-177 (315)
30 2ews_A Pantothenate kinase; PA 96.3 0.02 6.7E-07 51.2 9.9 51 295-350 236-287 (287)
31 2gup_A ROK family protein; sug 96.2 0.011 3.6E-07 53.2 7.5 51 121-174 87-142 (292)
32 3cer_A Possible exopolyphospha 96.0 0.0021 7.2E-08 59.3 2.0 75 116-191 102-191 (343)
33 3mdq_A Exopolyphosphatase; str 95.9 0.0025 8.6E-08 58.1 1.7 73 116-191 89-170 (315)
34 1u6z_A Exopolyphosphatase; alp 95.7 0.0091 3.1E-07 58.2 4.9 74 115-191 95-176 (513)
35 3vgl_A Glucokinase; ROK family 95.6 0.088 3E-06 47.8 10.9 46 127-174 94-146 (321)
36 3hi0_A Putative exopolyphospha 95.4 0.044 1.5E-06 53.3 8.5 73 115-190 99-178 (508)
37 4db3_A Glcnac kinase, N-acetyl 95.2 0.14 4.7E-06 46.7 10.9 53 298-350 272-325 (327)
38 3r8e_A Hypothetical sugar kina 95.2 0.093 3.2E-06 47.7 9.6 46 127-174 115-168 (321)
39 2i7n_A Pantothenate kinase 1; 94.8 0.058 2E-06 49.6 7.1 73 275-349 284-358 (360)
40 2qm1_A Glucokinase; alpha-beta 93.9 0.1 3.6E-06 47.3 6.8 46 127-174 106-158 (326)
41 3cet_A Conserved archaeal prot 93.0 0.054 1.9E-06 49.0 3.1 25 150-174 127-151 (334)
42 3djc_A Type III pantothenate k 92.2 0.54 1.8E-05 41.4 8.5 18 9-26 4-21 (266)
43 2h3g_X Biosynthetic protein; p 90.6 1.2 4.1E-05 39.1 9.1 18 9-26 2-19 (268)
44 3bex_A Type III pantothenate k 89.4 0.69 2.4E-05 40.2 6.5 19 9-27 5-23 (249)
45 3zx3_A Ectonucleoside triphosp 87.8 1.3 4.4E-05 42.0 7.5 89 82-171 89-202 (452)
46 1zbs_A Hypothetical protein PG 84.3 3.4 0.00012 36.5 8.3 69 104-173 62-132 (291)
47 1zc6_A Probable N-acetylglucos 81.4 8.4 0.00029 34.1 9.8 89 81-173 53-145 (305)
48 2e2o_A Hexokinase; acetate and 73.2 14 0.00049 32.4 8.7 55 104-160 62-117 (299)
49 2f9w_A Pantothenate kinase; CO 69.6 17 0.0006 31.7 8.2 17 9-25 25-41 (271)
50 3aap_A Ectonucleoside triphosp 69.2 3.4 0.00012 37.8 3.7 36 150-185 140-177 (353)
51 2ch5_A NAGK protein; transfera 68.2 16 0.00056 32.8 8.1 90 81-171 49-142 (347)
52 2aa4_A Mannac kinase, putative 66.0 12 0.0004 32.8 6.5 51 298-349 236-286 (289)
53 2ap1_A Putative regulator prot 65.8 7.8 0.00027 34.7 5.4 46 127-174 118-170 (327)
54 2yhw_A Bifunctional UDP-N-acet 62.1 5.9 0.0002 35.8 3.8 45 128-174 130-181 (343)
55 4htl_A Beta-glucoside kinase; 60.5 25 0.00086 30.9 7.7 52 298-351 240-291 (297)
56 3vov_A Glucokinase, hexokinase 59.6 25 0.00087 31.0 7.5 54 298-351 240-295 (302)
57 3mcp_A Glucokinase; structural 59.3 31 0.0011 31.5 8.2 133 1-176 3-173 (366)
58 4htl_A Beta-glucoside kinase; 56.8 6.8 0.00023 34.7 3.2 46 127-174 95-147 (297)
59 1zxo_A Conserved hypothetical 55.4 5.5 0.00019 35.2 2.3 68 105-173 61-130 (291)
60 2aa4_A Mannac kinase, putative 48.6 6 0.00021 34.7 1.4 48 124-174 91-145 (289)
61 2yhx_A Hexokinase B; transfera 43.8 15 0.00053 34.7 3.5 51 298-351 386-442 (457)
62 2hoe_A N-acetylglucosamine kin 42.5 13 0.00046 34.0 2.8 46 127-174 186-236 (380)
63 3vov_A Glucokinase, hexokinase 40.8 10 0.00035 33.6 1.7 47 127-175 96-149 (302)
64 3epq_A Putative fructokinase; 37.7 21 0.0007 31.6 3.2 47 127-175 95-148 (302)
65 3djc_A Type III pantothenate k 34.9 61 0.0021 28.1 5.7 49 152-200 4-53 (266)
66 3htv_A D-allose kinase, alloki 34.5 24 0.00083 31.3 3.1 61 298-358 242-306 (310)
67 3eno_A Putative O-sialoglycopr 34.4 20 0.00067 32.4 2.5 27 296-322 250-276 (334)
68 2itm_A Xylulose kinase, xylulo 31.4 23 0.0008 33.6 2.6 48 296-351 387-434 (484)
69 2ivn_A O-sialoglycoprotein end 31.0 20 0.0007 32.2 2.0 35 296-335 245-279 (330)
70 3qbx_A Anhydro-N-acetylmuramic 30.5 13 0.00045 34.0 0.6 23 297-319 285-307 (371)
71 1bdg_A Hexokinase; phosphotran 29.9 31 0.0011 32.6 3.1 50 299-351 396-446 (451)
72 1cza_N Hexokinase type I; stru 28.5 19 0.00066 37.4 1.6 51 297-351 408-459 (917)
73 3cqy_A Anhydro-N-acetylmuramic 27.5 15 0.00052 33.6 0.5 23 297-319 291-313 (370)
74 2ch5_A NAGK protein; transfera 27.2 33 0.0011 30.7 2.8 50 298-350 268-323 (347)
75 1saz_A Probable butyrate kinas 27.2 33 0.0011 31.4 2.8 51 297-351 297-348 (381)
76 3cj1_A Ectonucleoside triphosp 27.2 34 0.0011 32.4 2.8 22 150-171 190-211 (456)
77 2zf5_O Glycerol kinase; hypert 26.3 53 0.0018 31.2 4.1 47 296-351 394-440 (497)
78 3vgl_A Glucokinase; ROK family 25.0 1.3E+02 0.0044 26.5 6.3 54 298-351 255-312 (321)
79 2ap1_A Putative regulator prot 23.8 16 0.00056 32.5 -0.0 52 298-349 272-324 (327)
80 2dpn_A Glycerol kinase; thermu 23.6 64 0.0022 30.6 4.1 46 297-351 400-445 (495)
81 2e2o_A Hexokinase; acetate and 23.3 23 0.00079 31.0 0.9 46 298-351 242-287 (299)
82 2q2r_A Glucokinase 1, putative 21.3 23 0.0008 32.2 0.5 46 128-174 126-205 (373)
83 3hm8_A Hexokinase-3; glucose, 20.6 70 0.0024 30.0 3.5 41 307-351 396-436 (445)
84 2yhx_A Hexokinase B; transfera 20.1 65 0.0022 30.4 3.3 39 133-172 43-84 (457)
85 2e1z_A Propionate kinase; TDCD 20.0 41 0.0014 31.2 1.8 27 1-27 12-38 (415)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-81 Score=603.85 Aligned_cols=369 Identities=37% Similarity=0.678 Sum_probs=321.6
Q ss_pred CCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCC----------------------CccccCCCcceeeccchhcc
Q 017086 6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT----------------------GVMVGMGQKDAYVGDEAQSK 63 (377)
Q Consensus 6 ~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~----------------------~~~~~~~~~~~~vg~~~~~~ 63 (377)
+.++||||+||+++|+||||++.|+++|||+++++++. ..+.+..+.+.+||+++...
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 67899999999999999999999999999999998753 11224455688999999877
Q ss_pred cC-cceeeccccCCccCCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccc
Q 017086 64 RG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 142 (377)
Q Consensus 64 ~~-~~~~~~p~~~g~i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~ 142 (377)
+. ...+++|+++|.|.|||+++++|+|+|.+.|++++.++|+++++|+++++..|+++++++||.+++++++++.+++|
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 64 67899999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred cccccC--------CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHH
Q 017086 143 SLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDM 214 (377)
Q Consensus 143 a~~~~g--------~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i 214 (377)
|+|++| .++|+|||+|++.|+|+||++|+++.++.+++++||++++++|.++|+++++. ..+.+.++++
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~I 240 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERI 240 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHH
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHH
Confidence 999998 68999999999999999999999999999999999999999999999887765 3466889999
Q ss_pred HHhccceecCHHHHHHHhccCCCcceEEEc--CCCc--EEeeCCccccccccCCCCccCCCc-CCChHHHHHHHHhcCCH
Q 017086 215 KEKLAYIALDYEQELETAKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDV 289 (377)
Q Consensus 215 k~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--p~~~--~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~ 289 (377)
|+++|||+.|++++++.........+.|.+ |||. .+.++.+||++||+||+|++++.+ ..+|+++|.++|.+||+
T Consensus 241 Ke~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~ 320 (427)
T 3dwl_A 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPI 320 (427)
T ss_dssp HHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCH
T ss_pred HHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCH
Confidence 999999999998888765443333556777 8887 788999999999999999999988 48999999999999999
Q ss_pred HHHHHhhcCcccccCCcCCcChHHHHHHHHHhhC--------------CCCceEEEECCCCCccccchhhhhhhcccccc
Q 017086 290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355 (377)
Q Consensus 290 ~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~ 355 (377)
|+|+.|++|||||||+|++|||.+||++||+.+. |...+++|..+++|.+++|+||||+|++++|+
T Consensus 321 dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~ 400 (427)
T 3dwl_A 321 DVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFG 400 (427)
T ss_dssp HHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTHH
T ss_pred HHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccchh
Confidence 9999999999999999999999999999999886 45668999999999999999999999999999
Q ss_pred cccccHHHHhhcCCcccccccC
Q 017086 356 QMWIAKAEYDESGPSIVHRKCF 377 (377)
Q Consensus 356 ~~~itr~~y~e~G~~~~~~k~~ 377 (377)
++||||+||+|+|+++++|+++
T Consensus 401 ~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 401 SYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHSEEHHHHHHSCGGGGSCCCC
T ss_pred heeEEHHHHhhhChHhheeccc
Confidence 9999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-79 Score=593.37 Aligned_cols=366 Identities=31% Similarity=0.569 Sum_probs=331.4
Q ss_pred CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccc-hhcccCcceeeccccCCccCCH
Q 017086 3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVSNW 81 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~d~ 81 (377)
.+++..+||||+||.+||+||+|++.|++++||+++++++.. ++..+||++ +...++...+++|+++|.|.||
T Consensus 19 ggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw 92 (498)
T 3qb0_A 19 GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW 92 (498)
T ss_dssp CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred CCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence 467889999999999999999999999999999999987542 456789997 5555777899999999999999
Q ss_pred HHHHHHHHHhcccccccCCCCC-cEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCC
Q 017086 82 DDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160 (377)
Q Consensus 82 ~~~~~~~~~~~~~~L~~~~~~~-~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~ 160 (377)
|+++.+|+|+|.+.|++.+.++ |+++++|++++...|+++++++||.+++++++++++++||+|++|.++|+|||+|++
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 9999999999988899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc------------------CCCccch------h-HHHHHHHHH
Q 017086 161 VSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER------------------GYSFTTT------A-EREIVRDMK 215 (377)
Q Consensus 161 ~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~ik 215 (377)
.|+|+||++|.++.+++.++++||++++++|.++|+++ ++.+... . +.++++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999864 3333221 2 345899999
Q ss_pred HhccceecC--HHHHHHHhccCCCcceEEEcCCCcEEeeCCc-cccccccCCCCccCCC---------------------
Q 017086 216 EKLAYIALD--YEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGM--------------------- 271 (377)
Q Consensus 216 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~-~~~~~E~lf~p~~~~~--------------------- 271 (377)
+++|+|+.+ ++++.... .....+.|++|||+.|.++.| ||++||.||+|++++.
T Consensus 253 E~~c~Va~~~~~~~~~~~~--~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKTEL--SSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHHHH--HTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhhhc--cCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999987 55443222 234578999999999999999 9999999999987643
Q ss_pred -----------------------------------------------------------cCCChHHHHHHHHhcCCHHHH
Q 017086 272 -----------------------------------------------------------EAAGIHETTYNSIMKCDVDIR 292 (377)
Q Consensus 272 -----------------------------------------------------------~~~~l~~~I~~~i~~~~~~~~ 292 (377)
+..||+++|.++|++||.|.|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 567999999999999999999
Q ss_pred HHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC---CCCccccchhhhhhhcccccccccccHHHHhhcCC
Q 017086 293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369 (377)
Q Consensus 293 ~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~ 369 (377)
+.|++||||+||+|++|||.+||++||+.+.| ..+++|.++ ++|.+++|+||||+|++.+|+++||||+||+|+|+
T Consensus 411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~ 489 (498)
T 3qb0_A 411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV 489 (498)
T ss_dssp HHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred HHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence 99999999999999999999999999999999 789999988 78999999999999999999999999999999999
Q ss_pred -cccccccC
Q 017086 370 -SIVHRKCF 377 (377)
Q Consensus 370 -~~~~~k~~ 377 (377)
.||+|||.
T Consensus 490 ~~iv~~kc~ 498 (498)
T 3qb0_A 490 ERLLNDRFR 498 (498)
T ss_dssp HHHHHHTTC
T ss_pred HhhccccCc
Confidence 99999994
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=3.1e-77 Score=568.92 Aligned_cols=374 Identities=87% Similarity=1.392 Sum_probs=342.5
Q ss_pred CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHH
Q 017086 4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~ 83 (377)
+++.++||||+||+++|+||++++.|++++||+++++++...+.+.+..+++||+++...++...+++|+++|.+.||+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 46789999999999999999999999999999999988776555555677899999988888889999999999999999
Q ss_pred HHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceE
Q 017086 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 163 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~ 163 (377)
++.+|+|+|.+.|+.+++++++++++|+.++..+|+++++++||.+++++++++++|+||+|++|.++++|||+|+++|+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 99999999988899988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEE
Q 017086 164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE 243 (377)
Q Consensus 164 i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
|+||++|.++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++.++++...........|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 99999999998888899999999999999999988888876667889999999999999998887766554445678999
Q ss_pred cCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhC
Q 017086 244 LPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA 323 (377)
Q Consensus 244 ~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~ 323 (377)
+|||+.+.++.+||.++|.||+|++++.+..+|.++|.++|.+||.++|+.+++|||||||+|++|||.+||++||..+.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017086 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377 (377)
Q Consensus 324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
|...++++..+++|.+++|+||+++|++..|++.||||+||+|+|+++++||||
T Consensus 322 p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 988889999999999999999999999999999999999999999999999997
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.1e-76 Score=566.01 Aligned_cols=372 Identities=47% Similarity=0.887 Sum_probs=164.8
Q ss_pred CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc-c-cCCCcceeeccchhcccCcceeeccccCCccCC
Q 017086 3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~-~-~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d 80 (377)
.+.+.++||||+||+++|+||++++.|++++||+++++++...+ . +....++++|+++...++...+++|+++|.+.|
T Consensus 2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d 81 (394)
T 1k8k_B 2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN 81 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence 35577899999999999999999999999999999988765432 1 223467889999988877788999999999999
Q ss_pred HHHHHHHHHHhc-ccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCC
Q 017086 81 WDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159 (377)
Q Consensus 81 ~~~~~~~~~~~~-~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~ 159 (377)
|+.++.+|+|+| ++.|+.+++++++++++|+.++...|+++++++||.+++++++++++|+||+|++|.++++|||+|+
T Consensus 82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~ 161 (394)
T 1k8k_B 82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD 161 (394)
T ss_dssp ------------------------------------------------------------------------CCEEEECS
T ss_pred HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence 999999999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcc
Q 017086 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239 (377)
Q Consensus 160 ~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 239 (377)
++|+|+||++|.++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++..+++.........
T Consensus 162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 99999999999999988899999999999999999999888887666789999999999999999877765544344456
Q ss_pred eEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHH
Q 017086 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 240 ~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL 319 (377)
..|.+|||+.+.++.+||.++|+||+|++++.+..+|+++|.++|.+||.+.|+.+++|||||||+|++|||.+||++||
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhC-----------CCCceEEEECCCCCccccchhhhhhhcccccc-cccccHHHHhhcCCccccc
Q 017086 320 TALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWIAKAEYDESGPSIVHR 374 (377)
Q Consensus 320 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~~y~e~G~~~~~~ 374 (377)
..+. |...+++|..+++|.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9987 77778999999999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-72 Score=568.97 Aligned_cols=370 Identities=21% Similarity=0.387 Sum_probs=294.0
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc----------------------------------------
Q 017086 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---------------------------------------- 46 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~---------------------------------------- 46 (377)
+++||||+||.++|+|||||+.|+. +|++++++......
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 4589999999999999999999974 69999987532110
Q ss_pred ---------------------------------ccCCCcceeeccchhc--ccCcceeeccccCC-----------ccCC
Q 017086 47 ---------------------------------VGMGQKDAYVGDEAQS--KRGILTLKYPIEHG-----------IVSN 80 (377)
Q Consensus 47 ---------------------------------~~~~~~~~~vg~~~~~--~~~~~~~~~p~~~g-----------~i~d 80 (377)
......+++||++|+. ..+.+.+++|+++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0112356899999975 35678999999999 4679
Q ss_pred HHHHHHHHHHhcccccccCCCC---CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeC
Q 017086 81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDi 157 (377)
|+++|.+|+|+|.+.|++.+++ ||+||++|+++++..|+++++++||.|++++++++++++||+|++|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999998899998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCcc-----chhHHHHHHHHHHhccceecCHHHHHH--
Q 017086 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT-----TTAEREIVRDMKEKLAYIALDYEQELE-- 230 (377)
Q Consensus 158 G~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~~~-- 230 (377)
|++.|+|+||+||+++.++..++++||++++++|.++|+.+++.+. ...+++.++++|+++|+++.++..+..
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 9999999999999999999999999999999999999999887654 345788999999999999876421100
Q ss_pred ----------------------H-----h------------------------------------------ccCCCcceE
Q 017086 231 ----------------------T-----A------------------------------------------KTSSAVEKS 241 (377)
Q Consensus 231 ----------------------~-----~------------------------------------------~~~~~~~~~ 241 (377)
. + .........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 0 0 000112346
Q ss_pred EEcCCCcEEeeCCccccccccCCCCccC--------------------------------CCcCCChHHHHHHHHhcCC-
Q 017086 242 YELPDGQVITIGAERFRCPEVLFQPSMI--------------------------------GMEAAGIHETTYNSIMKCD- 288 (377)
Q Consensus 242 ~~~p~~~~i~i~~~~~~~~E~lf~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~- 288 (377)
+..|+|..+.++.+++.++|.||.|+.. +.+..+|+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 7789999999999999999999998642 1235689999999999997
Q ss_pred HHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCc-----eEEEECCC---CCccccchhhhhhhccccccccccc
Q 017086 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSM-----KIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIA 360 (377)
Q Consensus 289 ~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~-----~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it 360 (377)
.|.|+.|++|||||||+|++|||.+||++||+.++|... +++|+.+| ||.+++|+||||+|++++|+++|||
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt 573 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY 573 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence 699999999999999999999999999999999998643 58999887 8999999999999999999999999
Q ss_pred HHHHhhcCCcccccccC
Q 017086 361 KAEYDESGPSIVHRKCF 377 (377)
Q Consensus 361 r~~y~e~G~~~~~~k~~ 377 (377)
|+||+|+|+++|++||.
T Consensus 574 k~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 574 QREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHTTHHHHHHCS
T ss_pred HHHHHhhCcHHHhhcCC
Confidence 99999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4.6e-71 Score=534.32 Aligned_cols=370 Identities=39% Similarity=0.686 Sum_probs=332.0
Q ss_pred CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc--------cccCCCcceeeccchhcccCcceeeccccCC
Q 017086 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76 (377)
Q Consensus 5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g 76 (377)
.+.++||||+||+++|+||++++.|++++||+++++++... +.+....+++||+++...++ ..+++|+++|
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G 81 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG 81 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence 46689999999999999999999999999999998876421 22223346899999987764 7899999999
Q ss_pred ccCCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccc---------c
Q 017086 77 IVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA---------S 147 (377)
Q Consensus 77 ~i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~ 147 (377)
.+.||+.++.+|+|+|.+.|+++++++++++++|+.++..+|+.+.+++||.+|+++++++++|+||+|+ .
T Consensus 82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 9999999999999999778998888999999999999999999999999999999999999999999998 5
Q ss_pred CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHH
Q 017086 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQ 227 (377)
Q Consensus 148 g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~ 227 (377)
+. +++|||+|+++|+|+||++|.++.++...+++||++++++|.++|.+++..+....+.+.++++|+++|++..++.+
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 56 89999999999999999999999888899999999999999999998888776666788999999999999998877
Q ss_pred HHHHhccC-CCcceEEEcCCCc-----EEeeCCccccccccCCCCccCCCcC-CChHHHHHHHHhcCCHHHHHHhhcCcc
Q 017086 228 ELETAKTS-SAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGMEA-AGIHETTYNSIMKCDVDIRKDLYGNIV 300 (377)
Q Consensus 228 ~~~~~~~~-~~~~~~~~~p~~~-----~i~i~~~~~~~~E~lf~p~~~~~~~-~~l~~~I~~~i~~~~~~~~~~l~~nIi 300 (377)
++++.... ......|.+||+. .+.++.+||.++|+||+|++.+.+. .+|.++|.++|.+||.+.|+.+++|||
T Consensus 241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv 320 (418)
T 1k8k_A 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV 320 (418)
T ss_dssp HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence 76544321 1234689999998 8999999999999999999887764 799999999999999999999999999
Q ss_pred cccCCcCCcChHHHHHHHHHhhC----------------CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHH
Q 017086 301 LSGGSTMFPGIADRMSKEITALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364 (377)
Q Consensus 301 l~GG~s~i~gl~~rl~~eL~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y 364 (377)
||||+|++|||.+||++||.... |...++++..+++|.+++|+|||++|++++|++.||||+||
T Consensus 321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey 400 (418)
T 1k8k_A 321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDY 400 (418)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHH
T ss_pred EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHH
Confidence 99999999999999999999875 56677999999999999999999999999999999999999
Q ss_pred hhcCCccccccc
Q 017086 365 DESGPSIVHRKC 376 (377)
Q Consensus 365 ~e~G~~~~~~k~ 376 (377)
+|+|+++++|||
T Consensus 401 ~e~G~~~~~~~~ 412 (418)
T 1k8k_A 401 EEIGPSICRHNP 412 (418)
T ss_dssp HHHCGGGGGCCC
T ss_pred hhhCHHHHhhhc
Confidence 999999999976
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=1.3e-59 Score=457.66 Aligned_cols=362 Identities=22% Similarity=0.413 Sum_probs=303.0
Q ss_pred CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCC---------Cc------------------------------
Q 017086 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT---------GV------------------------------ 45 (377)
Q Consensus 5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~---------~~------------------------------ 45 (377)
+..++|||++||.++|+|+|.|..|. .+|++++++... +.
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 45788999999999999999999998 669999865311 00
Q ss_pred ---------------------c----------ccCC-Ccceeeccchhcc-cCcceeeccccCCccC----C-------H
Q 017086 46 ---------------------M----------VGMG-QKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N-------W 81 (377)
Q Consensus 46 ---------------------~----------~~~~-~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~----d-------~ 81 (377)
. .|.+ ..+++||++|..+ ++.+.+++|+++|.+. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 0 0001 2477899999874 6778999999999998 8 9
Q ss_pred HHHHHHHHHhccc-ccccCCC---CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccC-CceEEEEe
Q 017086 82 DDMEKIWHHTFYN-ELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-RTTGIVLD 156 (377)
Q Consensus 82 ~~~~~~~~~~~~~-~L~~~~~---~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVVD 156 (377)
++++.+|+|+|.+ .|++.++ ++|+++++|+++++..|+++++++||.|++++++++.+++||+|++| .++|||||
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVD 276 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVN 276 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEc
Confidence 9999999999973 8999886 89999999999999999999999999999999999999999999999 69999999
Q ss_pred CCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCC-----CccchhHHHHHHHHHHhccce-ecCHHHHHH
Q 017086 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY-----SFTTTAEREIVRDMKEKLAYI-ALDYEQELE 230 (377)
Q Consensus 157 iG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v-~~~~~~~~~ 230 (377)
+|++.|+|+||++|+++.+++.++++||++++++|.++|.++|+ ++....+.+++++||+++||| ..|..
T Consensus 277 iG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~---- 352 (655)
T 4am6_A 277 IGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA---- 352 (655)
T ss_dssp ECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC----
T ss_pred CCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh----
Confidence 99999999999999999999999999999999999999999987 557778899999999999999 44431
Q ss_pred HhccCCCcceEE--EcCCC----cEEeeCCccccccccCCCCccCC----------------------------------
Q 017086 231 TAKTSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSMIG---------------------------------- 270 (377)
Q Consensus 231 ~~~~~~~~~~~~--~~p~~----~~i~i~~~~~~~~E~lf~p~~~~---------------------------------- 270 (377)
.....| ..|++ ..+.++.|||++||+||.|++++
T Consensus 353 ------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~ 426 (655)
T 4am6_A 353 ------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLS 426 (655)
T ss_dssp ------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHH
T ss_pred ------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchh
Confidence 112222 33554 36889999999999999997531
Q ss_pred ---------------------------------------------CcCCChHHHHHHHHhc-C---CHHHHHHhhcCccc
Q 017086 271 ---------------------------------------------MEAAGIHETTYNSIMK-C---DVDIRKDLYGNIVL 301 (377)
Q Consensus 271 ---------------------------------------------~~~~~l~~~I~~~i~~-~---~~~~~~~l~~nIil 301 (377)
....+|..+|.++|.. | +....+++++||+|
T Consensus 427 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nili 506 (655)
T 4am6_A 427 QFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILI 506 (655)
T ss_dssp HHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEE
T ss_pred HHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEE
Confidence 0024889999999973 2 44445599999999
Q ss_pred ccCCcCCcChHHHHHHHHHhhCC---------------------------------------------------------
Q 017086 302 SGGSTMFPGIADRMSKEITALAP--------------------------------------------------------- 324 (377)
Q Consensus 302 ~GG~s~i~gl~~rl~~eL~~~~~--------------------------------------------------------- 324 (377)
|||+|+||||...|.+.+.-.-|
T Consensus 507 vGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 586 (655)
T 4am6_A 507 VGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQH 586 (655)
T ss_dssp ESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHH
T ss_pred EcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhh
Confidence 99999999998777666543211
Q ss_pred ----------CCceEEEECCCCC---ccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017086 325 ----------SSMKIKVVAPPER---KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377 (377)
Q Consensus 325 ----------~~~~v~v~~~~~~---~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
.-.+|+|..+|.+ .+.+|+|||++|+++.|+++||||+||+|+|+++|++||+
T Consensus 587 ~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 587 QNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred hhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 0124889998854 8999999999999999999999999999999999999984
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.6e-36 Score=285.36 Aligned_cols=307 Identities=15% Similarity=0.212 Sum_probs=238.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhccc----CcceeeccccCCccCCHHH
Q 017086 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~d~~~ 83 (377)
.+|+||+||+++++|+.++. |.+.+||+++.+.+. +..+++|++|.... ....+.+|+++|.+.+|+.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~ 75 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV 75 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence 68999999999999998765 666789999876531 23457999987652 3445689999999999999
Q ss_pred HHHHHHHhcccccccC-CCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeC
Q 017086 84 MEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDS 157 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~-~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi 157 (377)
.+++|.+++.+..... ....++++++|+.++..+|+.+.+. ++.+|++.+.++++|+||+++++. .+.+|||+
T Consensus 76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi 154 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI 154 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence 9999999984332222 4468899999999999999998885 599999999999999999999986 68999999
Q ss_pred CCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc-CCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCC
Q 017086 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER-GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS 236 (377)
Q Consensus 158 G~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~ 236 (377)
|+++|+++++..|.++ .....++||+++++.|.+++.++ +..+ ..+.++++|++++....+...+
T Consensus 155 Gggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~-------- 220 (344)
T 1jce_A 155 GGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND-------- 220 (344)
T ss_dssp CSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH--------
T ss_pred CCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC--------
Confidence 9999999999999877 45678999999999999999754 2222 3567999999999875443211
Q ss_pred CcceEEEc-----CCCc--EEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhh-cCcccccCCcCC
Q 017086 237 AVEKSYEL-----PDGQ--VITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTMF 308 (377)
Q Consensus 237 ~~~~~~~~-----p~~~--~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~-~nIil~GG~s~i 308 (377)
...+.+ .+|. .+.++.+++. .+|+|.+ ..+.+.|.++|.+++.+.+..++ ++|+||||+|++
T Consensus 221 --~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~ 290 (344)
T 1jce_A 221 --ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLL 290 (344)
T ss_dssp --HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCS
T ss_pred --cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccc
Confidence 112222 2554 3455544443 2444421 23788889999999988888888 799999999999
Q ss_pred cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc-ccccc
Q 017086 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQ 355 (377)
Q Consensus 309 ~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~-l~~~~ 355 (377)
|||.++|++++.. ++..+++|.+++|.||++++. ++.|+
T Consensus 291 p~l~~~l~~~~~~--------~v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 291 RGLDTLLQKETGI--------SVIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp BTHHHHHHHHHSS--------CEEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred hHHHHHHHHHHCC--------CccccCChHHHHHHHHHHHHhChHHHH
Confidence 9999999999931 234467889999999999998 45553
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.93 E-value=9.4e-27 Score=229.39 Aligned_cols=297 Identities=16% Similarity=0.213 Sum_probs=202.1
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEecCCCCccccCCCcceeeccchhccc--C---cceeec---
Q 017086 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--G---ILTLKY--- 71 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~---~~~~~~--- 71 (377)
.+|+||+||+++++|++.+..|.++ +||+++.. +...++|++|.... + ...+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5899999999999999987767655 67777762 23467898876541 1 112222
Q ss_pred -ccc---CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccc
Q 017086 72 -PIE---HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 143 (377)
Q Consensus 72 -p~~---~g~i~d~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a 143 (377)
|++ +|...+. +....+++++.. +.++ .....+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||
T Consensus 73 ~p~~~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a~-~~AGl~~~~li~Ep~AA 149 (509)
T 2v7y_A 73 TDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDAG-RIAGLEVERIINEPTAA 149 (509)
T ss_dssp SCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHH
T ss_pred CCcEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEecCHHHH
Confidence 565 5642222 223344444321 1122 33468999999999999999988875 88999999999999999
Q ss_pred ccccCC-----ceEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHc-----CCCccchh----
Q 017086 144 LYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA---- 206 (377)
Q Consensus 144 ~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~---- 206 (377)
+++++. .+.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++.++ +.++....
T Consensus 150 Alay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~ 229 (509)
T 2v7y_A 150 ALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQ 229 (509)
T ss_dssp HHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHH
T ss_pred HHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 999886 4799999999999999876 3532 22223456899999999999988653 44443211
Q ss_pred -HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC------CC---cEEeeCCccccccccCCCCccCCCcCCCh
Q 017086 207 -EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSMIGMEAAGI 276 (377)
Q Consensus 207 -~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------~~---~~i~i~~~~~~~~E~lf~p~~~~~~~~~l 276 (377)
-.+.++++|+.++... ...+.+| +| ..+.++.+.+. -+|+|-+ ..+
T Consensus 230 ~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~fe---~l~~~~~-----~~i 285 (509)
T 2v7y_A 230 RLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKFE---ELSAHLV-----ERT 285 (509)
T ss_dssp HHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHHH---HHTHHHH-----HTT
T ss_pred HHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHHH---HHHHHHH-----HHH
Confidence 1356788888877531 1122222 23 12344443332 3333311 226
Q ss_pred HHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 277 ~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++|..+. +....+++|+|+||+|++|++.++|++.+.. ++..+.+|+.++|.||+++|..
T Consensus 286 ~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 286 MGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 777777777654 2345678999999999999999999998842 2345678999999999999864
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.91 E-value=8e-25 Score=208.58 Aligned_cols=304 Identities=15% Similarity=0.159 Sum_probs=196.8
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEecCCCCccccCCCcceeeccchhccc--Ccce----e----
Q 017086 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILT----L---- 69 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~----~---- 69 (377)
..|.||+||+++.+++..+..|.++ +||+++...+ ...++|.++.... +... +
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l 73 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence 4799999999999998865444433 5777665332 2244665543220 0000 0
Q ss_pred --------------ecccc-------------CCc-cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017086 70 --------------KYPIE-------------HGI-VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 70 --------------~~p~~-------------~g~-i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~ 118 (377)
.+|++ .|. +...+....+++++.. ..++ .....+++++|..++..+|
T Consensus 74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (383)
T ss_dssp TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence 02322 232 2223444555555531 1222 2346799999999999999
Q ss_pred HHHHhhccccCCCCeEEeeecccccccccCCc------eEEEEeCCCCceEEEEeeCC------ccc-ccceEEecccHH
Q 017086 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YAL-PHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~i~~v~~g------~~~-~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|+||+++++.. +.+|||+|+++|+++.+..+ ... .......++||.
T Consensus 152 ~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 230 (383)
T 1dkg_D 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (383)
T ss_dssp HHHHHHH-HHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred HHHHHHH-HHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence 9988875 889999999999999999988653 78999999999999988754 221 112345699999
Q ss_pred HHHHHHHHHHHHc-----CCCccch-----hHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCC-c--EEee
Q 017086 186 DLTDALMKILTER-----GYSFTTT-----AEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG-Q--VITI 252 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~-~--~i~i 252 (377)
++++.|.+++.++ +.++... ...+.++++|++++..... .-..+..+..++| . .+.+
T Consensus 231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~i 300 (383)
T 1dkg_D 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT----------DVNLPYITADATGPKHMNIKV 300 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce----------EEEEecccccCCCCeeEEEEE
Confidence 9999999988654 4443321 1145688888888753200 0000111223344 2 2344
Q ss_pred CCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEE
Q 017086 253 GAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~ 332 (377)
+.+.+. .+|+|.+ ..+.+.|.++|.++.. .+..+++|+||||+|++|++.++|++++.. ++.
T Consensus 301 t~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~ 362 (383)
T 1dkg_D 301 TRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR 362 (383)
T ss_dssp EHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCB
T ss_pred eHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCC
Confidence 444432 3344411 2267777778877652 345568999999999999999999999842 344
Q ss_pred CCCCCccccchhhhhhhcc
Q 017086 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|.+++|.||+++|..
T Consensus 363 ~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 363 KDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp CSSCTTTHHHHHHHHHTTT
T ss_pred CCcChHHHHHHHHHHHHHh
Confidence 5678999999999999875
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=3.2e-24 Score=194.85 Aligned_cols=244 Identities=16% Similarity=0.149 Sum_probs=179.8
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHHHH
Q 017086 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK 86 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~~ 86 (377)
.-.++||+||.++|+.+..++. . .++ .+ .....|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~-~-----~l~-----------------~~---------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG-I-----PVA-----------------GA---------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC-C-----EEE-----------------EE---------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC-c-----EEE-----------------EE---------eecccccCCCEEEcHHHHHH
Confidence 4579999999999998853221 1 111 11 11236889999999999999
Q ss_pred HHHHhccccccc-CCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceEEE
Q 017086 87 IWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165 (377)
Q Consensus 87 ~~~~~~~~~L~~-~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~ 165 (377)
+|++++...... ......++++.|..+....++. ++.+++.+|++...+..++.|++++++..+++|||+|+++|+++
T Consensus 76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~-~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~ 154 (272)
T 3h1q_A 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAEA-CGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTH-HHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHH-HHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence 999997543333 2234567788887776666655 55567999999999999999999999999999999999999999
Q ss_pred EeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC
Q 017086 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 245 (377)
Q Consensus 166 ~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p 245 (377)
++.+|.++ .....++||.++++.+.+.+. .+.+.++++|++++.- ++....
T Consensus 155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~~-----~~~~~~------------- 205 (272)
T 3h1q_A 155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSRH-----REIMRV------------- 205 (272)
T ss_dssp EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTTH-----HHHHHH-------------
T ss_pred EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCCH-----HHHHHH-------------
Confidence 99999887 446789999999999998883 1356788999887621 111100
Q ss_pred CCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCC
Q 017086 246 DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS 325 (377)
Q Consensus 246 ~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~ 325 (377)
.+.+++ .+.+.|.+.+.+++ ..++|+|+||+|++|||.++|++++.
T Consensus 206 --------------~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~----- 251 (272)
T 3h1q_A 206 --------------VRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLG----- 251 (272)
T ss_dssp --------------HHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHS-----
T ss_pred --------------HHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhC-----
Confidence 011111 15666667776665 24699999999999999999999983
Q ss_pred CceEEEECCCCCccccchhhhhhh
Q 017086 326 SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 326 ~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.++..+++|+++.|.||+++|
T Consensus 252 ---~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 252 ---KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp ---SCCBCCSSGGGHHHHHHHTTC
T ss_pred ---CCccccCChHHHHHHHHHhcC
Confidence 234456789999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.91 E-value=1.4e-24 Score=207.70 Aligned_cols=299 Identities=16% Similarity=0.159 Sum_probs=187.6
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEecCCCCccccCCCcceeeccchhcc--cCcceeeccccCC
Q 017086 7 IQPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RGILTLKYPIEHG 76 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~~~~~~~p~~~g 76 (377)
..+|.||+||+++++++..+..|.++ +||+++.. ....++|+++... .......+.+++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~k~~ 87 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFT----------DDERLIGDAAKNQVAANPQNTIFDIKRL 87 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEEC----------SSCEEESHHHHHTGGGCGGGEECCGGGT
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEe----------CCcEEecHHHHHhhHhCcccCHHHHHHH
Confidence 46799999999999999977665533 25555543 2345678776542 1111222222221
Q ss_pred c---------------------------------------cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCC
Q 017086 77 I---------------------------------------VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNP 114 (377)
Q Consensus 77 ~---------------------------------------i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~ 114 (377)
. +...+....+++++.. ..++ .....+++++|..++
T Consensus 88 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 88 IGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFN 165 (394)
T ss_dssp TTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCC
T ss_pred hCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCC
Confidence 1 1112333444444421 1222 334689999999999
Q ss_pred HHhHHHHHhhccccCCCCeEEeeecccccccccCCc------eEEEEeCCCCceEEEEeeCCccc---ccceEEecccHH
Q 017086 115 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEGYAL---PHAILRLDLAGR 185 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~i~~v~~g~~~---~~~~~~~~~GG~ 185 (377)
..+|+.+.+.+ +.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+..+... .......++||.
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~ 244 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGE 244 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChH
Confidence 99999888877 889999999999999999988653 56999999999999887533222 112334799999
Q ss_pred HHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEc---CCCcEEe-
Q 017086 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQVIT- 251 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p~~~~i~- 251 (377)
++++.|.+++.++ +.+..... -.+.++++|+.++.. ....+.+ .++..+.
T Consensus 245 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~~~~~~~ 308 (394)
T 3qfu_A 245 DFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQ----------------MSTRIEIDSFVDGIDLSE 308 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTC----------------SEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccC----------------CcEEEEEEeccCCceeEE
Confidence 9999999888532 22221110 023455555554421 1112222 1333322
Q ss_pred -eCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEE
Q 017086 252 -IGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK 330 (377)
Q Consensus 252 -i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~ 330 (377)
++.+.+ |-++.|. ...+.+.|.++|.++..+ ...+++|+||||+|++|++.++|++.+.. .+
T Consensus 309 ~i~r~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~ 371 (394)
T 3qfu_A 309 TLTRAKF---EELNLDL-----FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDG-------KK 371 (394)
T ss_dssp EEEHHHH---HHHHHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTT-------CC
T ss_pred EEEHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCC-------CC
Confidence 232222 1222220 112566667777665433 45668999999999999999999988732 23
Q ss_pred EECCCCCccccchhhhhhhcc
Q 017086 331 VVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 331 v~~~~~~~~~~w~Gasi~a~l 351 (377)
+..+.+|+.++|.||+++|.+
T Consensus 372 v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 372 ASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CBCCSCTTTHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHh
Confidence 455678999999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.88 E-value=4.4e-23 Score=197.90 Aligned_cols=302 Identities=17% Similarity=0.174 Sum_probs=186.4
Q ss_pred CCCcEEEeCCCCceEEeeeCCCCCCC--------CCCceeEecCCCCccccCCCcceeeccchhcc--cCcceeeccccC
Q 017086 6 DIQPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RGILTLKYPIEH 75 (377)
Q Consensus 6 ~~~~vviD~Gs~~~k~G~~~~~~P~~--------~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~~~~~~~p~~~ 75 (377)
.+.+|.||+||+++++++..+..|.. .+||+++.. ....++|.+|... .......+++++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~Kr 91 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT----------DTERLIGDAAKNQVAMNPTNTIFDAKR 91 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEEC----------SSCEEETHHHHHTTTTCSTTEECCGGG
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEEC----------CCCEEecHHHHHhhHhChhhhHHHHHH
Confidence 45689999999999999987655442 234544432 2356788877543 111222222222
Q ss_pred Cc---------------------------------------cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCC
Q 017086 76 GI---------------------------------------VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLN 113 (377)
Q Consensus 76 g~---------------------------------------i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~ 113 (377)
.. +...+....+++++.. ..++ .....+++++|..+
T Consensus 92 ~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~--~~~~~~vitvPa~~ 169 (404)
T 3i33_A 92 LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG--GKVHSAVITVPAYF 169 (404)
T ss_dssp TTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEEEECTTC
T ss_pred HhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhc--cCCCcEEEEECCCC
Confidence 11 1112333444444421 1222 23467999999999
Q ss_pred CHHhHHHHHhhccccCCCCeEEeeecccccccccCC---------ceEEEEeCCCCceEEEEee--CCcc-cccceEEec
Q 017086 114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLD 181 (377)
Q Consensus 114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~---------~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~ 181 (377)
+..+|+.+.+.+ +.+|++.+.++++|.||+++++. .+.+|+|+|+++|+++.+. +|.. +.......+
T Consensus 170 ~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~ 248 (404)
T 3i33_A 170 NDSQRQATKDAG-TITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 248 (404)
T ss_dssp CHHHHHHHHHHH-HHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred CHHHHHHHHHHH-HHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCC
Confidence 999999887774 88999999999999999998864 3459999999999999875 3322 222234579
Q ss_pred ccHHHHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEc---CCCc
Q 017086 182 LAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQ 248 (377)
Q Consensus 182 ~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p~~~ 248 (377)
+||.++++.+.+++.++ +..+.... -...+++.|+.++.. ....+.+ .++.
T Consensus 249 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~g~ 312 (404)
T 3i33_A 249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQASIEIDSLYEGV 312 (404)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SEEEEEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cceEEEEeeccCCc
Confidence 99999999999888432 22222110 023455566555421 1112222 1333
Q ss_pred EEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCce
Q 017086 249 VITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK 328 (377)
Q Consensus 249 ~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~ 328 (377)
.+.+.-.|..+ |-++.|- ...+.+.|.++|..+.. ....++.|+||||+|++|++.++|++.+...
T Consensus 313 ~~~~~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~------ 378 (404)
T 3i33_A 313 DFYTSITRARF-EELNADL-----FRGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK------ 378 (404)
T ss_dssp EEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC------
T ss_pred eeEEEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHHHcCCC------
Confidence 33222122222 2233330 11255666666665432 2345688999999999999999999887322
Q ss_pred EEEECCCCCccccchhhhhhhcc
Q 017086 329 IKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 329 v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++..+.+|+.+++.||+++|..
T Consensus 379 -~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 379 -ELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp -CCBCSSCTTTHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHHHHHH
Confidence 3445678999999999999875
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.85 E-value=3.1e-21 Score=193.41 Aligned_cols=297 Identities=17% Similarity=0.204 Sum_probs=190.3
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCC--------CCCceeEecCCCCccccCCCcceeeccchhcc-----c-Ccceee---
Q 017086 8 QPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK-----R-GILTLK--- 70 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~--------~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~-----~-~~~~~~--- 70 (377)
..|.||+||+++.+++..+..|.+ .+||+++...+ ...++|.+|... . ..+.++
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~t~~~~Kr~i 73 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTT---------SCEEESHHHHTTTTTCGGGEEECGGGTT
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECC---------CcEEECHHHHHHhhhCCCCEeehhhHhh
Confidence 489999999999999886544432 25666665322 234566655332 0 000000
Q ss_pred ---------------cccc-------------CCccCC-HHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017086 71 ---------------YPIE-------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 71 ---------------~p~~-------------~g~i~d-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~ 118 (377)
+|++ .|.... .+....+++++.. ..++ ..-..+++++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHC--SCCCEEEEEECTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEEECCCCCHHHH
Confidence 1322 232222 2334445555431 2233 2345799999999999999
Q ss_pred HHHHhhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEEeeC------Ccc-cccceEEecccHH
Q 017086 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYE------GYA-LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~v~~------g~~-~~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+.. |.. +.......++||.
T Consensus 152 ~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~ 230 (605)
T 2kho_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGG
T ss_pred HHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHH
Confidence 9988776 88999999999999999998864 35799999999999998863 432 1122334689999
Q ss_pred HHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC------CC-c
Q 017086 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-Q 248 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------~~-~ 248 (377)
++++.|.+++.++ +.++.... -...++++|+.++... ...+.+| +| .
T Consensus 231 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~ 294 (605)
T 2kho_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYITADATGPK 294 (605)
T ss_dssp GTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEecccccCCCCce
Confidence 9999999888653 44432211 1345777777776421 1122221 23 1
Q ss_pred E--EeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCC
Q 017086 249 V--ITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS 325 (377)
Q Consensus 249 ~--i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~ 325 (377)
. +.++.+.|. +.+.+|.. +.+.|.++|..+.. ....++.|+||||+|++|++.+++++.+..
T Consensus 295 ~~~~~itr~~fe~l~~~~~~~---------i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~---- 359 (605)
T 2kho_A 295 HMNIKVTRAKLESLVEDLVNR---------SIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK---- 359 (605)
T ss_dssp EEEEEEEHHHHHTTCCSTTGG---------GTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS----
T ss_pred EEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC----
Confidence 1 233333332 22333332 77788888877642 234568999999999999999999988832
Q ss_pred CceEEEECCCCCccccchhhhhhhcc
Q 017086 326 SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 326 ~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+..+.+|+.+++.||+++|..
T Consensus 360 ----~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 360 ----EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp ----CCBCSSCTTTHHHHHHHHHHTT
T ss_pred ----CcCcCCCcchHHHHHHHHHHHH
Confidence 2345678899999999999874
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.85 E-value=7.7e-21 Score=188.78 Aligned_cols=216 Identities=17% Similarity=0.211 Sum_probs=147.8
Q ss_pred CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-------ceEEEEeCCCCceEEEEee--CCcc
Q 017086 102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA 172 (377)
Q Consensus 102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~i~~v~--~g~~ 172 (377)
-..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||+++++. .+.+|+|+|+++++++.+. +|..
T Consensus 139 v~~~VitVPa~f~~~qr~a~~~A~-~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 139 VTNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 357999999999999999988765 88999999999999999998863 4689999999999999887 6643
Q ss_pred -cccceEEecccHHHHHHHHHHHHHH-----cCCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceE
Q 017086 173 -LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS 241 (377)
Q Consensus 173 -~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~ 241 (377)
+.......++||.++++.|.+++.. .+.++.... -...++++|+.++... ...
T Consensus 218 ~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~ 281 (554)
T 1yuw_A 218 EVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QAS 281 (554)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEE
Confidence 2223445799999999999988853 233332211 1245677777766421 122
Q ss_pred EEcC---CCcEE--eeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHH
Q 017086 242 YELP---DGQVI--TIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS 316 (377)
Q Consensus 242 ~~~p---~~~~i--~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~ 316 (377)
+.++ +|..+ .++.+.+ |-++.|- ...+.+.|.+++..+. +.+..++.|+||||+|++|++.++|+
T Consensus 282 i~i~~~~~g~~~~~~ltr~~~---e~l~~~~-----~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~ 351 (554)
T 1yuw_A 282 IEIDSLYEGIDFYTSITRARF---EELNADL-----FRGTLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQ 351 (554)
T ss_dssp EEETTCSSSCCEEEEEEHHHH---HHHTHHH-----HHHTTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred EEEeeccCCceEEEEEEHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHH
Confidence 3332 23222 2222222 1222220 0114556666666542 22345689999999999999999998
Q ss_pred HHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 317 KEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 317 ~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.+... ++..+.+|..+++.||+++|..
T Consensus 352 ~~f~~~-------~v~~~~np~~aVA~Gaa~~a~~ 379 (554)
T 1yuw_A 352 DFFNGK-------ELNKSINPDEAVAYGAAVQAAI 379 (554)
T ss_dssp HHTTTC-------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHcCCC-------ccccCCCchhHHHHHHHHHHHH
Confidence 877432 3345678999999999999863
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.83 E-value=8e-21 Score=192.02 Aligned_cols=214 Identities=10% Similarity=0.166 Sum_probs=147.5
Q ss_pred CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC------------ceEEEEeCCCCceEEEEee-
Q 017086 102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY- 168 (377)
Q Consensus 102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~i~~v~- 168 (377)
-..+++++|..++..+|+.+.+.+ +.+|++.+.++++|+||++++|. .+.+|+|+|+++++|+.+.
T Consensus 138 v~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~ 216 (675)
T 3d2f_A 138 ITDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAF 216 (675)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEe
Confidence 357999999999999999988876 88999999999999999987642 4689999999999999886
Q ss_pred -CCcc-cccceEEecccHHHHHHHHHHHHHH-----cCCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCC
Q 017086 169 -EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSS 236 (377)
Q Consensus 169 -~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~ 236 (377)
+|.. +.......++||.++++.|.+++.. .+.++.... -...++++|+.++...
T Consensus 217 ~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~-------------- 282 (675)
T 3d2f_A 217 KKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT-------------- 282 (675)
T ss_dssp ETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS--------------
T ss_pred cCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC--------------
Confidence 6654 2223335799999999999998853 233332110 1345677777665321
Q ss_pred CcceEEEcC---CCc--EEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcC
Q 017086 237 AVEKSYELP---DGQ--VITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPG 310 (377)
Q Consensus 237 ~~~~~~~~p---~~~--~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~g 310 (377)
...+.++ ++. .+.++.+.|. +.+.++.. +.+.|.++|..... ...-++.|+||||+|++|+
T Consensus 283 --~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~---------i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~ 349 (675)
T 3d2f_A 283 --NAPFSVESVMNDVDVSSQLSREELEELVKPLLER---------VTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPT 349 (675)
T ss_dssp --EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT---------TTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHH
T ss_pred --ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHhCC--ChhhCcEEEEECCCccChH
Confidence 1122222 122 2233333321 22223322 66667777765421 1234689999999999999
Q ss_pred hHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 311 IADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 311 l~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.++|++.+.. .+..+.+|..++..||+++|..
T Consensus 350 v~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 350 LKQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence 99999988831 3445678999999999999863
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.82 E-value=1.1e-20 Score=181.47 Aligned_cols=238 Identities=13% Similarity=0.148 Sum_probs=150.4
Q ss_pred HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCc--------
Q 017086 82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-------- 150 (377)
Q Consensus 82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~-------- 150 (377)
+....+++++.. ..++ .....+++++|..++..+|+.+.+.+ +.+|+..+.++++|.||+++++..
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~ 205 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDK 205 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence 344555555532 2232 34467999999999999999887776 889999999999999999998754
Q ss_pred eEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHc-----C--CCccchh-----HHHHHHHHH
Q 017086 151 TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----G--YSFTTTA-----EREIVRDMK 215 (377)
Q Consensus 151 ~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~--~~~~~~~-----~~~~~~~ik 215 (377)
+.+|+|+|+++|+++.+. +|.. +.......++||.++++.|.+++..+ + .+..... -...++.+|
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 285 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK 285 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence 589999999999999863 3321 11122347999999999999888643 1 1111100 012455666
Q ss_pred HhccceecCHHHHHHHhccCCCcceEEEc---CCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHH
Q 017086 216 EKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIR 292 (377)
Q Consensus 216 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~ 292 (377)
+.++.. ....+.+ .++....+.-.|..+ |-+++|- ...+.+.|.+.|.+.. ..
T Consensus 286 ~~ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~-----~~~i~~~i~~~l~~~~--~~ 341 (409)
T 4gni_A 286 RALSRS----------------TNASFSVESLIDGLDFASTINRLRY-ETIARTV-----FEGFNRLVESAVKKAG--LD 341 (409)
T ss_dssp HHHHHS----------------SEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHHHHHHHHHHHHTT--CC
T ss_pred HhCCCC----------------CceEEEeecccCCcceEEEeeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CC
Confidence 554421 0111222 123322222122222 2233331 1114555555555442 22
Q ss_pred HHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEE------ECCCCCccccchhhhhhhccc
Q 017086 293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKV------VAPPERKYSVWIGGSILASLS 352 (377)
Q Consensus 293 ~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~ 352 (377)
...++.|+||||+|++|++.++|++.+.. .++| ....+|+.++-.||+++|...
T Consensus 342 ~~~i~~V~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 342 PLDVDEVIMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHCCEEEEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 34568899999999999999999877732 2355 344689999999999998874
No 18
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.78 E-value=1.7e-19 Score=180.77 Aligned_cols=301 Identities=17% Similarity=0.197 Sum_probs=180.4
Q ss_pred CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhccc--C----cceeec--
Q 017086 8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--G----ILTLKY-- 71 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~----~~~~~~-- 71 (377)
.+|.||+||+++.+++..+..|. ..+||+++...+ ...++|.+|.... + .+.+++
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Krll 73 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GCTLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTT---------SCEEESHHHHHTTTTCGGGEECCGGGTT
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCC---------CcEEecHHHHHHHHhCCCcEehhhHHhh
Confidence 57999999999999997544332 344666655322 2355676654320 0 011111
Q ss_pred ----------------cc-----c--------CCc-cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017086 72 ----------------PI-----E--------HGI-VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 72 ----------------p~-----~--------~g~-i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~ 118 (377)
|+ . .|. +...+....+++++.. ..|+. .-..+++++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr 151 (605)
T 4b9q_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHH
T ss_pred CCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence 11 0 111 2223444555555531 23332 345799999999999999
Q ss_pred HHHHhhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEEeeCCc----c---cccceEEecccHH
Q 017086 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY----A---LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~v~~g~----~---~~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|.||++++|. .+.+|+|+|+++++++.+.-+. . +.......++||.
T Consensus 152 ~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~ 230 (605)
T 4b9q_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHH
T ss_pred HHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChH
Confidence 9877776 88999999999999999998863 4679999999999999886433 1 1112234688999
Q ss_pred HHHHHHHHHHHHc-----CCCccchhH-----HHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC--C-cE--E
Q 017086 186 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QV--I 250 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~--~-~~--i 250 (377)
++++.+.+++..+ +.+...... ...+++.|+.++.... ......+...+ | .. +
T Consensus 231 d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~------------~~i~~~~~~~~~~g~~~~~~ 298 (605)
T 4b9q_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ------------TDVNLPYITADATGPKHMNI 298 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE------------EEEEEEEEEECSSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC------------eEEEEeeeccCCCCCeeEEE
Confidence 9999999888642 333221111 3446666666553210 00011111111 1 11 2
Q ss_pred eeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceE
Q 017086 251 TIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKI 329 (377)
Q Consensus 251 ~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v 329 (377)
.++...+. +.+.++.. +.+.|.+++..... ...-++.|+||||+|++|++.+++++.+..
T Consensus 299 ~itr~~~e~l~~~~~~~---------i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg~-------- 359 (605)
T 4b9q_A 299 KVTRAKLESLVEDLVNR---------SIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK-------- 359 (605)
T ss_dssp EEEHHHHHHHHHHHHHH---------TTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------
T ss_pred EEeHHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhcc--------
Confidence 22222221 11112211 44445555554321 223457899999999999999999988832
Q ss_pred EEECCCCCccccchhhhhhhcc
Q 017086 330 KVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 330 ~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+..+.+|+.++-.||+++|..
T Consensus 360 ~~~~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 360 EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp CCCSSSCTTTHHHHHHHHHHHH
T ss_pred CcCCCcChhHHHHHhHHHHHHH
Confidence 2334568899999999999874
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.74 E-value=1e-17 Score=159.00 Aligned_cols=172 Identities=16% Similarity=0.219 Sum_probs=109.1
Q ss_pred HHHHHhhccccCCCCeEEeeecccccccccC-------CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHH
Q 017086 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA 190 (377)
Q Consensus 118 ~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~ 190 (377)
.+.+.+.+ +.+|++...+..+|+|++.+++ ..+.+|||+|+++|+++.+.+|.++ .....++||.++++.
T Consensus 153 v~~~~~~~-~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~~ 229 (377)
T 2ych_A 153 VAGVLEAL-RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTEA 229 (377)
T ss_dssp HHHHHHHH-HHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHH
T ss_pred HHHHHHHH-HHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHHH
Confidence 35555544 8899999999999999998874 2457999999999999999999887 457789999999999
Q ss_pred HHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCC
Q 017086 191 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIG 270 (377)
Q Consensus 191 l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~ 270 (377)
+.+.+ +. +.+.++++|+++++...+..++. ..+.+++ ..+.++.+. +.|++ +|
T Consensus 230 i~~~~---~~------~~~~aE~~K~~~~~~~~~~~~~~----------~~i~~~~-~~~~i~~~~--~~~~i-~~---- 282 (377)
T 2ych_A 230 IARSF---NL------DLLAAEEVKRTYGMATLPTEDEE----------LLLDFDA-ERERYSPGR--IYDAI-RP---- 282 (377)
T ss_dssp HHHHT---TC------CHHHHHHHHHHTC------------------------------------C--HHHHH-HH----
T ss_pred HHHHh---CC------CHHHHHHHHhhcccccccccccc----------ccccccc-ccccCCHHH--HHHHH-HH----
Confidence 98743 22 24679999999987643211110 0111221 112222111 11111 11
Q ss_pred CcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHH
Q 017086 271 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320 (377)
Q Consensus 271 ~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~ 320 (377)
....+.+.|.+++..++...+....++|+||||+|++||+.+++++.+.
T Consensus 283 -~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 283 -VLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp -HHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 0112555566666555444556678899999999999999999999994
No 20
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.72 E-value=2.4e-18 Score=161.10 Aligned_cols=177 Identities=15% Similarity=0.127 Sum_probs=125.6
Q ss_pred cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcccc------C--------CCcceeeccchhcccCcceeecccc
Q 017086 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG------M--------GQKDAYVGDEAQSKRGILTLKYPIE 74 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~------~--------~~~~~~vg~~~~~~~~~~~~~~p~~ 74 (377)
.+.||+|+.++|+-. ++ .-.+.+||.++.........+ . .+..+.||++|. +|++
T Consensus 23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l~ 91 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQG 91 (346)
T ss_dssp EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCSS
T ss_pred EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------cccC
Confidence 689999999999853 32 234567888876554321000 0 124556776653 8999
Q ss_pred CCccCCHHHHHHHHHHhccccc-ccCCCCCcEE--EeeCCCCCHHhHHHHHhhcccc-------------CCCCeEEeee
Q 017086 75 HGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVL--LTEAPLNPKANREKMTQIMFET-------------FNTPAMYVAI 138 (377)
Q Consensus 75 ~g~i~d~~~~~~~~~~~~~~~L-~~~~~~~~vv--l~~~~~~~~~~~~~l~~~lfe~-------------~~~~~v~~~~ 138 (377)
.+.+.+ +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +.+..+.+++
T Consensus 92 ~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~ 170 (346)
T 2fsj_A 92 DGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP 170 (346)
T ss_dssp TTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred CCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence 999988 666666666664332 1112335689 9999988888888888876442 1256799999
Q ss_pred ccccccccc--C-----C-ceEEEEeCCCCceEEEEee--CCcccccceEEecccHHHHHHHHHHHHHH
Q 017086 139 QAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EGYALPHAILRLDLAGRDLTDALMKILTE 197 (377)
Q Consensus 139 ~~~~a~~~~--g-----~-~~~lVVDiG~~~t~i~~v~--~g~~~~~~~~~~~~GG~~l~~~l~~~l~~ 197 (377)
+|++|++++ + . .+.+|||+|+++|+++.+. +|.++.......++||+++++.+.+.+++
T Consensus 171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK 239 (346)
T ss_dssp TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence 999999974 2 1 4569999999999999998 77766554678899999999999887754
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.67 E-value=3.4e-16 Score=149.82 Aligned_cols=200 Identities=11% Similarity=0.136 Sum_probs=131.4
Q ss_pred HHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHH
Q 017086 115 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~ 189 (377)
+...+.+.+.+ +..|+....++.+|+||++++.. .+.+|||+|+++|+++.+.+|.+. .....++||+++|+
T Consensus 167 ~~~v~n~~~~~-~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it~ 243 (419)
T 4a2a_A 167 LKVYEMFYNFL-QDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVIK 243 (419)
T ss_dssp HHHHHHHHHHH-HTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHHH
Confidence 44555666555 88999999999999999988765 368999999999999999999887 55678999999999
Q ss_pred HHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC--C-cEEeeCCccc-cccccCCC
Q 017086 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAERF-RCPEVLFQ 265 (377)
Q Consensus 190 ~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~--~-~~i~i~~~~~-~~~E~lf~ 265 (377)
.+...+. ...+.+|++|.+++....+. .....+.+|. + ....++...+ .+.+..++
T Consensus 244 dIa~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~ve 303 (419)
T 4a2a_A 244 DVSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR 303 (419)
T ss_dssp HHHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHHH
Confidence 9998762 14577999999987643211 0111222221 1 1122221111 11111111
Q ss_pred CccCCCcCCChHHHHHHHHhcCCH----HHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEEC-----C--
Q 017086 266 PSMIGMEAAGIHETTYNSIMKCDV----DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA-----P-- 334 (377)
Q Consensus 266 p~~~~~~~~~l~~~I~~~i~~~~~----~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~-----~-- 334 (377)
.+.+.|.+.|+.... .......+.|+||||+|++||+.+.+++.+. .++++.. |
T Consensus 304 ---------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g------~~vri~~~~~~~p~~ 368 (419)
T 4a2a_A 304 ---------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK------SPVRTGCYANSDRPS 368 (419)
T ss_dssp ---------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT------SCEEECCGGGSSSCC
T ss_pred ---------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC------CCeEEEecCCCCchh
Confidence 145555666655432 1145677889999999999999999999983 2456655 3
Q ss_pred --------CCCccccchhhhhhhccc
Q 017086 335 --------PERKYSVWIGGSILASLS 352 (377)
Q Consensus 335 --------~~~~~~~w~Gasi~a~l~ 352 (377)
.+|.|+.-.|-.+++...
T Consensus 369 ~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 369 IINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CBTCHHHHTCGGGHHHHHTTCC----
T ss_pred ccCcccccCCchHHHHHHHHHHHhhc
Confidence 367888888888877553
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.55 E-value=5.4e-15 Score=137.00 Aligned_cols=288 Identities=11% Similarity=0.090 Sum_probs=152.2
Q ss_pred cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc--------ccCCCcceeeccchhcccCcceeeccccCCccCC
Q 017086 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM--------VGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~--------~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d 80 (377)
.+.||+|++++|+.+..++.....+|+........... ...++..+.+|..+.. .......+....
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~g~~y~vg~~a~~------~~~t~~~~~~~~ 75 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPD------AVVTTNIAWQYS 75 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEEEEECCEESSCCCCSSSCCCCEEEETTEEEEECTTCBS------CCCSCCSGGGGS
T ss_pred eEEEecCCccceEEEecCCCEEEEEecCceeecccccccCCCceeEEEECCEEEEEcccccc------cccCcCCCccch
Confidence 58999999999998854443333343322111111000 0112234455544311 111222222223
Q ss_pred HHHHHHHHHHhcccccccCCCCCcEEEeeCCC-CCH-------H-hHHH---HHhhc----cccCCCCeEEeeecccccc
Q 017086 81 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL-NPK-------A-NREK---MTQIM----FETFNTPAMYVAIQAVLSL 144 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~-~~~-------~-~~~~---l~~~l----fe~~~~~~v~~~~~~~~a~ 144 (377)
...+..+. +.+.+ .+....+..+++..|.. +.. . ..+. +++.+ .+.+++..+.++++|++|+
T Consensus 76 ~~~l~~i~-~aL~~-~~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~ 153 (320)
T 2zgy_A 76 DVNVVAVH-HALLT-SGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAG 153 (320)
T ss_dssp HHHHHHHH-HHHHH-HSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHH
T ss_pred HHHHHHHH-HHHHH-cCCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHH
Confidence 33333333 23211 22222234578888855 221 1 1122 22222 3456678999999999999
Q ss_pred cccC-----CceEEEEeCCCCceEEEEeeCCcc-cccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHH-HHh
Q 017086 145 YASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDM-KEK 217 (377)
Q Consensus 145 ~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i-k~~ 217 (377)
++++ ..+.+|||||+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++.++ ....++++ |.+
T Consensus 154 ~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i----~~~~ae~~lk~~ 229 (320)
T 2zgy_A 154 YEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKG----SSYLADDIIIHR 229 (320)
T ss_dssp HHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGG----GHHHHHHHHHTT
T ss_pred HhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCCCC----CHHHHHHHHHHh
Confidence 8763 357899999999999999999876 433456779999999999999986543222 33456666 554
Q ss_pred ccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhc
Q 017086 218 LAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG 297 (377)
Q Consensus 218 ~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~ 297 (377)
.... +... .. ..|. ......+. +.+ ....+.+.|.+.+++. ...+
T Consensus 230 ~~~~---~~~~--~i----------~~~~--------~~~~~~~~-i~~-----~~~~~~~~i~~~i~~~------~~~~ 274 (320)
T 2zgy_A 230 KDNN---YLKQ--RI----------NDEN--------KISIVTEA-MNE-----ALRKLEQRVLNTLNEF------SGYT 274 (320)
T ss_dssp TCHH---HHHH--HS----------SSSC--------THHHHHHH-HHH-----HHHHHHHHHHHHHTTC------CCCC
T ss_pred hhhh---cccc--ee----------cCch--------hhHHHHHH-HHH-----HHHHHHHHHHHHHHhh------cCCC
Confidence 2100 0000 00 0000 00000000 000 0001333444444432 2347
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+||||+|.+ +.+.++ +.++.. .-++..+++|+++.-+|+.++++
T Consensus 275 ~vvl~GGga~l--l~~~l~----~~~~~~-~~~~~~~~~P~~a~A~G~~~~~~ 320 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAVK----KHTQIR-DERFFKTNNSQYDLVNGMYLIGN 320 (320)
T ss_dssp EEEEESTTHHH--HHHHHH----HTSCCC-GGGEECCSCGGGHHHHHHHHHHC
T ss_pred eEEEECChHHH--HHHHHH----HHhCCC-CCceeeCCCcHHHHHHHHHHhcC
Confidence 89999999987 554444 444321 00345577899999999998864
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.46 E-value=1.2e-14 Score=134.85 Aligned_cols=288 Identities=14% Similarity=0.123 Sum_probs=161.6
Q ss_pred CCCCCCcEEEeCCCCceEEeee--C---CCCCCCCCCceeEecCCC-------CccccCCCcceeeccchhcccCcceee
Q 017086 3 DTEDIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHT-------GVMVGMGQKDAYVGDEAQSKRGILTLK 70 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~--~---~~~P~~~~p~~~~~~~~~-------~~~~~~~~~~~~vg~~~~~~~~~~~~~ 70 (377)
.+.+.-.|.||+|-.++|+-.. + ++.-+..|||.++...+. ...+..++..++||+.+...
T Consensus 3 ~~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~------- 75 (329)
T 4apw_A 3 NITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED------- 75 (329)
T ss_dssp --CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC-------
T ss_pred CccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc-------
Confidence 3445567899999999998653 2 122335688887754432 11233456778888865321
Q ss_pred ccccCCccCCHHHHHHHHHHhcccccccC-CCCCcEEEeeCCCCCH--HhHHHHHhhcccc-------------CCCCeE
Q 017086 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPK--ANREKMTQIMFET-------------FNTPAM 134 (377)
Q Consensus 71 ~p~~~g~i~d~~~~~~~~~~~~~~~L~~~-~~~~~vvl~~~~~~~~--~~~~~l~~~lfe~-------------~~~~~v 134 (377)
-+.... +-+..+.++..++-..+... ...-.+++..|..... .+++.+.+.+-.. +.+..+
T Consensus 76 -~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v 152 (329)
T 4apw_A 76 -SSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDI 152 (329)
T ss_dssp -SGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEE
T ss_pred -cccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEE
Confidence 011112 11234444445542334322 1223466666654432 2455555554321 224578
Q ss_pred Eeeeccccccccc----CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHH-c-CCCccchhHH
Q 017086 135 YVAIQAVLSLYAS----GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-R-GYSFTTTAER 208 (377)
Q Consensus 135 ~~~~~~~~a~~~~----g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~-~-~~~~~~~~~~ 208 (377)
.+.|++..|.+.. ...+.+|||||+++|+++.+.+|.++.......++||.++++.+.+.+++ + +..+..
T Consensus 153 ~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~~---- 228 (329)
T 4apw_A 153 TIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLNNGNLITN---- 228 (329)
T ss_dssp EEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTTS----
T ss_pred EEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhccCCCCCH----
Confidence 9999999998875 23578999999999999999999988766678999999999999988754 2 222211
Q ss_pred HHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCC
Q 017086 209 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCD 288 (377)
Q Consensus 209 ~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~ 288 (377)
..++++|+. +.+.. .+....+. ...+.+.+ ..+.+.|.+.+.+.
T Consensus 229 ~~~e~i~~~-g~~~~----------------------g~~~~~~~--~~~i~~~~----------~e~~~~I~~~i~~~- 272 (329)
T 4apw_A 229 EQAESALNN-GYMKK----------------------GGEIDTES--STVIKKVK----------EKFLKDAIKLIEKR- 272 (329)
T ss_dssp BTTTTCSSS-CSSCE----------------------ECTTCCST--THHHHHHH----------HHHHHHHHHHHHHH-
T ss_pred HHHHHHHhc-CCccc----------------------CCcchhHH--HHHHHHHH----------HHHHHHHHHHHHHc-
Confidence 123333332 11000 00000000 00000000 01233334444322
Q ss_pred HHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 289 ~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
...+.+.+.|+||||+|.+ +.+.+++++ +. ++...++|.++.-.|+-.++..
T Consensus 273 -~~~~~~~~~IvltGGGA~l--~~~~l~~~~----~~----~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 273 -GFKLDQLDSLIFIGGTTQK--LKEQISKTY----PN----NSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp -TCCTTSCSEEEEESTTHHH--HHHHHHHHS----TT----CEECCSSGGGHHHHHHHHHHHH
T ss_pred -CCCHHHccEEEEECChHHH--HHHHHHHHc----CC----CCEecCCChhhHHHHHHHHHhh
Confidence 0112346889999999999 445555554 32 2445678999999999887654
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.42 E-value=7.4e-14 Score=130.75 Aligned_cols=185 Identities=13% Similarity=0.156 Sum_probs=118.2
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc---------------cccCCCcc-eeeccchhcccCcceeec
Q 017086 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLKY 71 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~---------------~~~~~~~~-~~vg~~~~~~~~~~~~~~ 71 (377)
-.|.||+|-.++|+ ..++ -.+.+||.++...+... .+..++.. ++||+.+...... ..+
T Consensus 5 ~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~~ 79 (355)
T 3js6_A 5 YVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GKD 79 (355)
T ss_dssp EEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CEE
T ss_pred EEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--ccc
Confidence 47899999999996 4443 24678998876433211 11123445 8899877543111 112
Q ss_pred cc-cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH-HHHHhhcccc-----------CCCCeEE
Q 017086 72 PI-EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR-EKMTQIMFET-----------FNTPAMY 135 (377)
Q Consensus 72 p~-~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~-~~l~~~lfe~-----------~~~~~v~ 135 (377)
.+ ......+-+ .+.++..++. ..+.....+-.+++..|......++ +.+.+.+... +.+..|.
T Consensus 80 ~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~ 158 (355)
T 3js6_A 80 TASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVK 158 (355)
T ss_dssp CCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEE
T ss_pred ccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEE
Confidence 22 233444432 2222222221 1111111123577778877666665 4677666432 2236899
Q ss_pred eeecccccccccC-----------CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc
Q 017086 136 VAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 198 (377)
Q Consensus 136 ~~~~~~~a~~~~g-----------~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 198 (377)
++++|.+|+++++ ..+.+|||||+.+|+++.+.+|.++......+++||..+++.+.+.+.++
T Consensus 159 v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 159 IVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999874 35679999999999999999998887777789999999999999998654
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.90 E-value=1.9e-09 Score=102.79 Aligned_cols=180 Identities=12% Similarity=0.113 Sum_probs=106.7
Q ss_pred ecccccccccC-----CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHH
Q 017086 138 IQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
-+|.||.+++= ....++||+|+++|+++.+.+|..+ +...+++||+++|..+..-|. ..+...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lg--------t~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELG--------LEDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHT--------CCCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence 67777776652 2468999999999999999999888 667799999999999998882 12478899
Q ss_pred HHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEee--CCc-cccccc-cCCCCcc-CCCcCCC--hHH--HHHHH
Q 017086 213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPSM-IGMEAAG--IHE--TTYNS 283 (377)
Q Consensus 213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i--~~~-~~~~~E-~lf~p~~-~~~~~~~--l~~--~I~~~ 283 (377)
+||. |+.+..+. .+ ....+...+++ ... ...++. .+..|+. ... .+. +.+ ++.+.
T Consensus 460 rIK~-YG~A~ve~-----------lf---~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEElelVR~~ 523 (610)
T 2d0o_A 460 EIKK-YPLAKVES-----------LF---HLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPL-PGDLALEKVRAIRRS 523 (610)
T ss_dssp HHHH-SCEEEECS-----------SS---EEEETTSCEEECSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHHHHHHHHH
T ss_pred Hhcc-cCceeecc-----------cc---cccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence 9999 88764331 00 00001111222 000 000111 0000010 011 111 333 33333
Q ss_pred HhcC---CHHHHH----------HhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC-----CCCccccchhh
Q 017086 284 IMKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP-----PERKYSVWIGG 345 (377)
Q Consensus 284 i~~~---~~~~~~----------~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w~Ga 345 (377)
+++. ...+|. ..+..||||||+|+++|+.+-.++.|..+ .+++-.+ ..|.|++-.|-
T Consensus 524 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y-----~VRiGrP~~~gv~gP~fAtAvGL 598 (610)
T 2d0o_A 524 AKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY-----RLVAGRGNIRGSEGPRNAVATGL 598 (610)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS-----SCEEEECCGGGTSTTSCHHHHHH
T ss_pred HhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCCcHHHHHHH
Confidence 2111 001111 11256999999999999999999888652 4555444 36788888886
Q ss_pred hhh
Q 017086 346 SIL 348 (377)
Q Consensus 346 si~ 348 (377)
.+|
T Consensus 599 lly 601 (610)
T 2d0o_A 599 ILS 601 (610)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.88 E-value=2.3e-09 Score=102.46 Aligned_cols=181 Identities=12% Similarity=0.119 Sum_probs=105.7
Q ss_pred ecccccccccC-----CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHH
Q 017086 138 IQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
.+|.||.+++= ....++||+|+++|+++.+.+|..+ +...+++||+++|..+..-|. ..+...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg--------~~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG--------LEDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT--------CSCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence 56666666552 2468999999999999999999888 667799999999999998882 22478899
Q ss_pred HHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEee--CCc-cccccc-cCCCCcc-CCC-cCCChHH--HHHHHH
Q 017086 213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPSM-IGM-EAAGIHE--TTYNSI 284 (377)
Q Consensus 213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i--~~~-~~~~~E-~lf~p~~-~~~-~~~~l~~--~I~~~i 284 (377)
++|. |+.+..+. .+ ....+...+++ ... ...++. .+..|+. ... .-.++.+ ++.+.+
T Consensus 462 rIK~-YG~A~~e~-----------lf---~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I~~R~~vEElelVR~~a 526 (607)
T 1nbw_A 462 AIKK-YPLAKVES-----------LF---SIRHENGAVEFFREALSPAVFAKVVYIKEGELVPIDNASPLEKIRLVRRQA 526 (607)
T ss_dssp HHHH-SCEEEECS-----------SS---EEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEECCSSCHHHHHHHHHHH
T ss_pred Hhcc-cCceeecc-----------cc---cccCCCCeEEEecCCCCcceeeeeecccccceeeeCCCcchHHHHHHHHHH
Confidence 9999 88764331 00 00001111222 000 000101 0000000 001 0011333 333332
Q ss_pred hcC---CHHHHH----------HhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC-----CCCccccchhhh
Q 017086 285 MKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP-----PERKYSVWIGGS 346 (377)
Q Consensus 285 ~~~---~~~~~~----------~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w~Gas 346 (377)
++. ...+|. ..+..||||||+|+++|+.+-.++.|..+ .+++-.+ ..|.|++-.|-.
T Consensus 527 k~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGLl 601 (607)
T 1nbw_A 527 KEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGLL 601 (607)
T ss_dssp HHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHHH
T ss_pred hhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHHH
Confidence 111 011111 11256999999999999999999999763 3455443 367888888865
Q ss_pred hh
Q 017086 347 IL 348 (377)
Q Consensus 347 i~ 348 (377)
+|
T Consensus 602 ly 603 (607)
T 1nbw_A 602 LA 603 (607)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.51 E-value=5e-08 Score=87.98 Aligned_cols=52 Identities=25% Similarity=0.413 Sum_probs=42.5
Q ss_pred HHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 292 RKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 292 ~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+....+.|+++||.|+.|+++++|++.+ ..++..|++|++..-.||+++|.-
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~--------g~~~~~p~~p~~~~A~GAAl~A~~ 254 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREI--------NTEIIVPDIPQLTGALGAALYAFD 254 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHH--------TSCEECCSSGGGHHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHH--------CCCeeeCCCcchHHHHHHHHHHHH
Confidence 3345578999999999999999998877 235677889999988999999853
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.54 E-value=0.00015 Score=64.87 Aligned_cols=47 Identities=17% Similarity=0.388 Sum_probs=38.9
Q ss_pred cCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 297 GNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.++-|++.+.+.+.|.. +|..++++++..-.||+++|..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 6799999999999999999988832 4555667788889999999865
No 29
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.58 E-value=0.0022 Score=58.44 Aligned_cols=75 Identities=16% Similarity=0.105 Sum_probs=53.6
Q ss_pred CHHhHHHHHhhccccCCCCeEEeeeccccccc-------ccC-CceEEEEeCCCCceEEEEeeCCcccccceEEecccHH
Q 017086 114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLY-------ASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 185 (377)
Q Consensus 114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~-------~~g-~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~ 185 (377)
...+++.+++.+.+..|++ +.++...-=|.| +.+ ..+++|||||+++|.++-+.++.+. ....+|+|+-
T Consensus 95 ~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v 171 (315)
T 1t6c_A 95 RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIV 171 (315)
T ss_dssp TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHH
T ss_pred cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHH
Confidence 3456677777777778876 344443222222 123 5679999999999999999888876 5678999998
Q ss_pred HHHHHH
Q 017086 186 DLTDAL 191 (377)
Q Consensus 186 ~l~~~l 191 (377)
.+++.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888776
No 30
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.33 E-value=0.02 Score=51.19 Aligned_cols=51 Identities=18% Similarity=0.011 Sum_probs=41.3
Q ss_pred hhcCcccccC-CcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017086 295 LYGNIVLSGG-STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 295 l~~nIil~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
-+++|+++|| .+..|++.++|.+.+.-. ..++.-++++++..-+||+++++
T Consensus 236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~~ 287 (287)
T 2ews_A 236 KTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLEK 287 (287)
T ss_dssp TCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTCC
T ss_pred CCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhCC
Confidence 3457999999 999999999999766442 34677788899999999998763
No 31
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.19 E-value=0.011 Score=53.17 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=40.0
Q ss_pred HHhhccccCCCCeEEeeeccccccccc-----CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 121 MTQIMFETFNTPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+.+ +.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|+++.
T Consensus 87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 142 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR 142 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence 55666 778887 78999999988873 5678999999976 6677778887654
No 32
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.04 E-value=0.0021 Score=59.29 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=49.1
Q ss_pred HhHHHHHhhccccCCCCeEEeee---cccccccc------c--CCceEEEEeCCCCceEEEEeeC--Cccc--ccceEEe
Q 017086 116 ANREKMTQIMFETFNTPAMYVAI---QAVLSLYA------S--GRTTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRL 180 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~------~--g~~~~lVVDiG~~~t~i~~v~~--g~~~--~~~~~~~ 180 (377)
.++..+++.+.+.+|++ +.+++ ++.++..+ . ....++|+|||+++|.++.+.+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 45566777776777765 33443 22222222 1 2356999999999999998877 4321 1256789
Q ss_pred cccHHHHHHHH
Q 017086 181 DLAGRDLTDAL 191 (377)
Q Consensus 181 ~~GG~~l~~~l 191 (377)
|+|+-.+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999888876
No 33
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.85 E-value=0.0025 Score=58.08 Aligned_cols=73 Identities=16% Similarity=0.189 Sum_probs=50.4
Q ss_pred HhHHHHHhhccccCCCCeEEeee---ccccc------ccccCCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHH
Q 017086 116 ANREKMTQIMFETFNTPAMYVAI---QAVLS------LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a------~~~~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~ 186 (377)
.++..+++.+.+..|++ +.++. ++-++ .+.....+++|+|||+++|.++.+.++.+. ....+|+|.-.
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr 165 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQR 165 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhH
Confidence 45566777776777776 33443 22221 122223579999999999999999999877 56789999877
Q ss_pred HHHHH
Q 017086 187 LTDAL 191 (377)
Q Consensus 187 l~~~l 191 (377)
+++.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 76654
No 34
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.68 E-value=0.0091 Score=58.21 Aligned_cols=74 Identities=11% Similarity=0.080 Sum_probs=51.5
Q ss_pred HHhHHHHHhhccccCCCCeEEeeecc---cccccc----cC-CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHH
Q 017086 115 KANREKMTQIMFETFNTPAMYVAIQA---VLSLYA----SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~---~~a~~~----~g-~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~ 186 (377)
..++..+++.+-+..|++ |.+++.. -+...+ .. ...++|||||+++|.++-..++.+. ....+++|.-.
T Consensus 95 A~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr 171 (513)
T 1u6z_A 95 ALNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVS 171 (513)
T ss_dssp CTTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHH
T ss_pred CcCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHH
Confidence 355677788787888876 3444422 222211 11 2379999999999999998888876 56789999988
Q ss_pred HHHHH
Q 017086 187 LTDAL 191 (377)
Q Consensus 187 l~~~l 191 (377)
+++.+
T Consensus 172 lte~f 176 (513)
T 1u6z_A 172 FAQLY 176 (513)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 35
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.57 E-value=0.088 Score=47.85 Aligned_cols=46 Identities=17% Similarity=0.160 Sum_probs=35.8
Q ss_pred ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||+++.
T Consensus 94 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 94 QRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred hhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 456777 88999999888752 4578999999976 7777788998764
No 36
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.37 E-value=0.044 Score=53.26 Aligned_cols=73 Identities=21% Similarity=0.195 Sum_probs=50.7
Q ss_pred HHhHHHHHhhccccCCCCeEEeeec---cccccc----ccCCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHH
Q 017086 115 KANREKMTQIMFETFNTPAMYVAIQ---AVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~---~~~a~~----~~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l 187 (377)
..++..+++.+.+..|++ |.+++. +-+..+ +.....++|||||+++|.++-+.+|.+. ....+|+|.-.+
T Consensus 99 A~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 175 (508)
T 3hi0_A 99 AENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRL 175 (508)
T ss_dssp STTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHH
T ss_pred CcCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEeh
Confidence 455666777776777876 334432 222222 2233578999999999999999999887 567899999777
Q ss_pred HHH
Q 017086 188 TDA 190 (377)
Q Consensus 188 ~~~ 190 (377)
++.
T Consensus 176 ~e~ 178 (508)
T 3hi0_A 176 SEQ 178 (508)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
No 37
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.20 E-value=0.14 Score=46.69 Aligned_cols=53 Identities=21% Similarity=0.233 Sum_probs=37.6
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCCC-CceEEEECCCCCccccchhhhhhhc
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAPS-SMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|||.||.+..+-|.+++++.+.+.... ...++|..+.-...+.-+||+.++-
T Consensus 272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 5888888888877888888888776532 2245666555556777889887653
No 38
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.16 E-value=0.093 Score=47.68 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=35.7
Q ss_pred ccC-CCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 127 ETF-NTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~-~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+ ++| |++.++.-+++++. +..+.++|-+|.+ +-...|.+|+++.
T Consensus 115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~ 168 (321)
T 3r8e_A 115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI 168 (321)
T ss_dssp HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence 456 776 78999998887752 4578999999976 7777788998775
No 39
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=94.82 E-value=0.058 Score=49.61 Aligned_cols=73 Identities=11% Similarity=0.025 Sum_probs=47.4
Q ss_pred ChHHHHHHHHhcCCH-HHHHHhhcCcccccC-CcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017086 275 GIHETTYNSIMKCDV-DIRKDLYGNIVLSGG-STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 275 ~l~~~I~~~i~~~~~-~~~~~l~~nIil~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
+|..+|.+.|.+... --++.-+++|+++|| .++.|++.+.|.+.|.---.. .+++.-++++++.--+||++++
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 344444444433211 113444568999999 999999999999988531111 2345556678999999998864
No 40
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=93.86 E-value=0.1 Score=47.27 Aligned_cols=46 Identities=15% Similarity=0.183 Sum_probs=35.4
Q ss_pred ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...+.+|.++.
T Consensus 106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 445677 78999999988752 4578999999987 6677788887764
No 41
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=92.97 E-value=0.054 Score=49.00 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=23.5
Q ss_pred ceEEEEeCCCCceEEEEeeCCcccc
Q 017086 150 TTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 150 ~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
.++++||||+++|+|+|+.+|+++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999975
No 42
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=92.19 E-value=0.54 Score=41.38 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=16.3
Q ss_pred cEEEeCCCCceEEeeeCC
Q 017086 9 PLVCDNGTGMVKAGFAGD 26 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~ 26 (377)
.++||+|.+++|+|+..+
T Consensus 4 lL~IDIGNT~iK~gl~d~ 21 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG 21 (266)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 699999999999999855
No 43
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=90.61 E-value=1.2 Score=39.15 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=15.6
Q ss_pred cEEEeCCCCceEEeeeCC
Q 017086 9 PLVCDNGTGMVKAGFAGD 26 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~ 26 (377)
-++||+|.+++|+|+..+
T Consensus 2 lL~IDIGNT~ik~gl~~~ 19 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE 19 (268)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECcCcEEEEEEEC
Confidence 378999999999998854
No 44
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=89.37 E-value=0.69 Score=40.25 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=16.4
Q ss_pred cEEEeCCCCceEEeeeCCC
Q 017086 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~ 27 (377)
.++||+|.+++|+|+..++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5889999999999988543
No 45
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=87.76 E-value=1.3 Score=42.05 Aligned_cols=89 Identities=11% Similarity=0.083 Sum_probs=47.8
Q ss_pred HHHHHHHHHhccccccc-CCCCCcEEEeeCCCCC------HHhHHHHHhhccccC---CC--CeEEeeecc-------cc
Q 017086 82 DDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNP------KANREKMTQIMFETF---NT--PAMYVAIQA-------VL 142 (377)
Q Consensus 82 ~~~~~~~~~~~~~~L~~-~~~~~~vvl~~~~~~~------~~~~~~l~~~lfe~~---~~--~~v~~~~~~-------~~ 142 (377)
+.++.+++.+. +.... ..+..|+.+....-+. ...++.+++.+-+.+ ++ ..+.++... ++
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 35566666653 22221 1345677766543221 123455555554443 33 456666532 22
Q ss_pred cccccC------CceEEEEeCCCCceEEEEeeCCc
Q 017086 143 SLYASG------RTTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 143 a~~~~g------~~~~lVVDiG~~~t~i~~v~~g~ 171 (377)
+.|..| ..+..++|+|+++|+|+-..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 233334 25677889999999999666553
No 46
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=84.31 E-value=3.4 Score=36.55 Aligned_cols=69 Identities=16% Similarity=0.073 Sum_probs=46.3
Q ss_pred cEEEeeCCCCCHHhHHHHHhhccccCCC-CeEEeeecccccccc-cCCceEEEEeCCCCceEEEEeeCCccc
Q 017086 104 PVLLTEAPLNPKANREKMTQIMFETFNT-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 104 ~vvl~~~~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~~~lVVDiG~~~t~i~~v~~g~~~ 173 (377)
.+-+..|-.. ......+.+.+-+.+++ ..+.+.++.-+|+++ .+..+++++=+|.+..-...+.||+..
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 4667677654 22223444555455665 368999999999987 567788888888776555556788775
No 47
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=81.42 E-value=8.4 Score=34.14 Aligned_cols=89 Identities=12% Similarity=0.175 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhcccccccCCCC---CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccccc-CCceEEEEe
Q 017086 81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-GRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVD 156 (377)
++.+...++.++ +..+.+..+ ..+-+..|-......... ++..|.. +. .|.+.++.-+++++. +..++++|-
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~-l~~~~~~-~~-pv~v~NDa~aaa~ge~~~~~~v~v~ 128 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGE-FESQAPG-FA-RLSLATDGYTTLLGAHGGQPGIIVA 128 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHH-HHHTCCC-CS-EEEEECHHHHHHHHHTTTSSEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHH-HHHhCCC-Cc-eEEEECCHHHHHHhhcCCCCeEEEE
Confidence 345555555554 323333333 236677776554333222 2222221 33 488999999988873 567888888
Q ss_pred CCCCceEEEEeeCCccc
Q 017086 157 SGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 157 iG~~~t~i~~v~~g~~~ 173 (377)
+|.+..-...+.+|...
T Consensus 129 ~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 129 LGTGSIGEALYPDGSHR 145 (305)
T ss_dssp ESSSEEEEEECTTSCEE
T ss_pred ecCCeEEEEEeCCCcEE
Confidence 88876433333488654
No 48
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=73.21 E-value=14 Score=32.42 Aligned_cols=55 Identities=24% Similarity=0.323 Sum_probs=36.9
Q ss_pred cEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccccc-CCceEEEEeCCCC
Q 017086 104 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-GRTTGIVLDSGDG 160 (377)
Q Consensus 104 ~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVDiG~~ 160 (377)
.+-+..|-..+......+.+.+-+ ++. .+.+.++.-+++++. ...+.++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~-pv~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAP-KVIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSS-EEEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCC-CEEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 567777766433333445555534 665 477889998888865 3578888999988
No 49
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=69.64 E-value=17 Score=31.69 Aligned_cols=17 Identities=24% Similarity=0.225 Sum_probs=15.2
Q ss_pred cEEEeCCCCceEEeeeC
Q 017086 9 PLVCDNGTGMVKAGFAG 25 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~ 25 (377)
-++||+|.+++|+|+..
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 48999999999999874
No 50
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=69.23 E-value=3.4 Score=37.83 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=26.1
Q ss_pred ceEEEEeCCCCceEEEEeeC--CcccccceEEecccHH
Q 017086 150 TTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLAGR 185 (377)
Q Consensus 150 ~~~lVVDiG~~~t~i~~v~~--g~~~~~~~~~~~~GG~ 185 (377)
.+.+|+|||+++|.++-... +.+.......+++||.
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 46999999999999997754 3444333467788873
No 51
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=68.23 E-value=16 Score=32.78 Aligned_cols=90 Identities=14% Similarity=0.174 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcccccccCCC--CCcEEEeeCCCCCHHhHHHHHhhccccCC--CCeEEeeecccccccccCCceEEEEe
Q 017086 81 WDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSLYASGRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~--~~~vvl~~~~~~~~~~~~~l~~~lfe~~~--~~~v~~~~~~~~a~~~~g~~~~lVVD 156 (377)
++.+...++.++ +..+.... -..+-+..|-.........+.+.+-+.++ ...|.+.++.-+++++....++++|-
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~~~~~~v~v~ 127 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 127 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhhCCCCcEEEE
Confidence 344555555554 22222222 24577778877665544455555545565 23478999999888875346778888
Q ss_pred CCCCceEEEEeeCCc
Q 017086 157 SGDGVSHTVPIYEGY 171 (377)
Q Consensus 157 iG~~~t~i~~v~~g~ 171 (377)
+|.+.-......+|.
T Consensus 128 ~GTGig~~~v~~~G~ 142 (347)
T 2ch5_A 128 SGTGSNCRLINPDGS 142 (347)
T ss_dssp ESSSEEEEEECTTSC
T ss_pred EcCCceeEEEcCCCC
Confidence 887654332223554
No 52
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=65.97 E-value=12 Score=32.75 Aligned_cols=51 Identities=16% Similarity=0.285 Sum_probs=36.2
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+.+.... ..+++..+.....+...||+.++
T Consensus 236 ~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 236 CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 5888888887788999999888775321 24455555444567788988765
No 53
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=65.77 E-value=7.8 Score=34.69 Aligned_cols=46 Identities=11% Similarity=0.034 Sum_probs=34.7
Q ss_pred ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|.++.
T Consensus 118 ~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 170 (327)
T 2ap1_A 118 ARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPIT 170 (327)
T ss_dssp HHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 446777 88999999988752 3568899999876 6677788987764
No 54
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=62.12 E-value=5.9 Score=35.83 Aligned_cols=45 Identities=20% Similarity=0.191 Sum_probs=34.1
Q ss_pred cCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 128 TFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 128 ~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|+++.
T Consensus 130 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 130 TLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 35677 78899998887753 3568999999976 6677788887764
No 55
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=60.52 E-value=25 Score=30.87 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=38.5
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|||.||.+..+.|.+++++.+...... .++|..+...+.+.-.||+.++..
T Consensus 240 ~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 240 HIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHHH
Confidence 5899999999899999999999866543 345554544567788998877643
No 56
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=59.61 E-value=25 Score=30.96 Aligned_cols=54 Identities=15% Similarity=0.108 Sum_probs=36.4
Q ss_pred CcccccCCc-CC-cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 298 NIVLSGGST-MF-PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIil~GG~s-~i-~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|||.||.+ .. +-|.+++++.+.+........+|..+.-...+.-+||+.++-.
T Consensus 240 ~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 295 (302)
T 3vov_A 240 VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYL 295 (302)
T ss_dssp EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHHH
T ss_pred EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHHH
Confidence 578888877 65 4588899999987764332333544444456778899877643
No 57
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=59.26 E-value=31 Score=31.50 Aligned_cols=133 Identities=11% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCccee-eccccCCccC
Q 017086 1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVS 79 (377)
Q Consensus 1 ~~~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~-~~p~~~g~i~ 79 (377)
|+..+..-.+.||+|.++++++... +.-... .. ..|....
T Consensus 3 ~~n~d~~~~lgiDIGgt~i~~~l~d-~G~il~-----------------------------------~~~~~~~~~~--- 43 (366)
T 3mcp_A 3 MYTNDNRIVMTLDAGGTNFVFSAIQ-GGKEIA-----------------------------------DPVVLPACAD--- 43 (366)
T ss_dssp TTTTCCCEEEEEECSSSEEEEEEEE-TTEECS-----------------------------------CCEEEECCTT---
T ss_pred cCCCCCCEEEEEEECcceEEEEEEE-CCEEEE-----------------------------------EEEEEECCCC---
Q ss_pred CHHHHHHHHHH---hcccccccCCCCCcEEEeeCCCCCH------------HhH--HHHHhhccccCCCCeEEeeecccc
Q 017086 80 NWDDMEKIWHH---TFYNELRVAPEEHPVLLTEAPLNPK------------ANR--EKMTQIMFETFNTPAMYVAIQAVL 142 (377)
Q Consensus 80 d~~~~~~~~~~---~~~~~L~~~~~~~~vvl~~~~~~~~------------~~~--~~l~~~lfe~~~~~~v~~~~~~~~ 142 (377)
+.+.+.+.+.. .+.+.+. ..-..+-+..|-.... ..+ -.+.+.+-+.+++| |.+.++.-|
T Consensus 44 ~~~~~l~~i~~~~~~i~~~~~--~~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~P-V~veNDana 120 (366)
T 3mcp_A 44 CLDKCLGNLVEGFKAIQAGLP--EAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIP-VFINNDGSL 120 (366)
T ss_dssp CHHHHHHHHHHHHHHHHTTCS--SCCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSC-EEEECHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhh--cCCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCC-EEEechhhH
Q ss_pred cccc--------------------cCCceEEEEeCCCCceEEEEeeCCcccccc
Q 017086 143 SLYA--------------------SGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176 (377)
Q Consensus 143 a~~~--------------------~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~ 176 (377)
++++ -+..+.++|-+| +.+-...|.||.++...
T Consensus 121 aAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lG-tGIG~givi~G~l~~G~ 173 (366)
T 3mcp_A 121 FAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLG-TGFGAGVVIDGELLRGD 173 (366)
T ss_dssp HHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEES-SSEEEEEEETTEECCCT
T ss_pred HHHHHHHhCCCcccccccccccccCCCCcEEEEEEC-CcceEEEEECCEEecCC
No 58
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=56.83 E-value=6.8 Score=34.66 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=34.7
Q ss_pred ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+++| |++.++.-|++++. +..+.++|-+|.+ +-...|.||+++.
T Consensus 95 ~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 147 (297)
T 4htl_A 95 AETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIFSNGELVR 147 (297)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEEECCEEEe
Confidence 456777 88999988887743 3578899999865 6666778988764
No 59
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=55.37 E-value=5.5 Score=35.16 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=42.3
Q ss_pred EEEeeCCCCCHHhHHHHHhhccccCCC-CeEEeeeccccccccc-CCceEEEEeCCCCceEEEEeeCCccc
Q 017086 105 VLLTEAPLNPKANREKMTQIMFETFNT-PAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 105 vvl~~~~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~~-g~~~~lVVDiG~~~t~i~~v~~g~~~ 173 (377)
+.+..|-.. ......+.+.+-+.++. ..+.+.++.-+++++. +..++++|=+|.+..-...+.||+..
T Consensus 61 igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 61 VYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEE
Confidence 445455433 11112344444445664 3488999999998864 67788888888776445556788764
No 60
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=48.64 E-value=6 Score=34.70 Aligned_cols=48 Identities=13% Similarity=0.026 Sum_probs=35.6
Q ss_pred hccccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017086 124 IMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 124 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
.+-+.+++| |.+.++.-+++++. +. +.++|.+|.+ +-...|.||+++.
T Consensus 91 ~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 91 TLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 333456777 78999999887753 34 8999999987 6777788988764
No 61
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=43.80 E-value=15 Score=34.72 Aligned_cols=51 Identities=12% Similarity=0.162 Sum_probs=41.0
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCCC------CceEEEECCCCCccccchhhhhhhcc
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAPS------SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~~------~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|.+-||....|+|.+++++.+..+++. ..+|.+.... -.+-+||+++|..
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~---dgsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAI---DGXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECC---CTTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECC---CchhhhHHHHHHH
Confidence 4778888888899999999999988754 3467777664 5689999999876
No 62
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=42.53 E-value=13 Score=34.03 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=34.7
Q ss_pred ccCCCCeEEeeeccccccccc---C--CceEEEEeCCCCceEEEEeeCCcccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS---G--RTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~---g--~~~~lVVDiG~~~t~i~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. | ..+.++|-+|.+ +-...|.+|.++.
T Consensus 186 ~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (380)
T 2hoe_A 186 EKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYR 236 (380)
T ss_dssp HHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECC
T ss_pred HHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEec
Confidence 446776 78999998887753 3 378999999876 6677778988764
No 63
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=40.77 E-value=10 Score=33.59 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=34.5
Q ss_pred ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCccccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~~ 175 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||+++..
T Consensus 96 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 96 EATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 456777 77999988887643 4578899999876 56666778887643
No 64
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=37.66 E-value=21 Score=31.64 Aligned_cols=47 Identities=17% Similarity=0.230 Sum_probs=35.8
Q ss_pred ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCccccc
Q 017086 127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~~ 175 (377)
+.+++| |.+.++.-|++++- +..+.+.|-+|.+ +-...|.||+++..
T Consensus 95 ~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 148 (302)
T 3epq_A 95 NEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQG 148 (302)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCS
T ss_pred HHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEccc
Confidence 456787 88999998887743 3578899999865 66777889988754
No 65
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=34.91 E-value=61 Score=28.05 Aligned_cols=49 Identities=12% Similarity=-0.054 Sum_probs=33.7
Q ss_pred EEEEeCCCCceEEEEeeCCcccccceEEe-cccHHHHHHHHHHHHHHcCC
Q 017086 152 GIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDALMKILTERGY 200 (377)
Q Consensus 152 ~lVVDiG~~~t~i~~v~~g~~~~~~~~~~-~~GG~~l~~~l~~~l~~~~~ 200 (377)
-|+||+|.+.+.+..+-++..+....... ....+.+...+..++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 48999999999999887776653322222 24566777777777776554
No 66
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=34.46 E-value=24 Score=31.26 Aligned_cols=61 Identities=16% Similarity=0.277 Sum_probs=39.3
Q ss_pred CcccccCCcCCcC-hHHHHHHHHHhhCCC---CceEEEECCCCCccccchhhhhhhccccccccc
Q 017086 298 NIVLSGGSTMFPG-IADRMSKEITALAPS---SMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 358 (377)
Q Consensus 298 nIil~GG~s~i~g-l~~rl~~eL~~~~~~---~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~ 358 (377)
.|||-||.+..+. +.++|.+.+++.+.. ...++|..+.-...+.-+||+.++.-..|.+-|
T Consensus 242 ~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 242 AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 4788888887754 467788777766521 124566655555678899999887665554433
No 67
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=34.37 E-value=20 Score=32.39 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=23.6
Q ss_pred hcCcccccCCcCCcChHHHHHHHHHhh
Q 017086 296 YGNIVLSGGSTMFPGIADRMSKEITAL 322 (377)
Q Consensus 296 ~~nIil~GG~s~i~gl~~rl~~eL~~~ 322 (377)
.++|+++||.+.-..+.++|.+.+...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999888654
No 68
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=31.40 E-value=23 Score=33.62 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=31.7
Q ss_pred hcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 296 YGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++||.|+-+-+.+.+.+-+ ..+|.+. +....++-.||+++|..
T Consensus 387 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~--~~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 387 PQSVTLIGGGARSEYWRQMLADIS------GQQLDYR--TGGDVGPALGAARLAQI 434 (484)
T ss_dssp CSCEEEESGGGCCHHHHHHHHHHH------CCCEEEE--SCTTSCHHHHHHHHHHH
T ss_pred cceEEEEeccccCHHHHHHHHHHh------CCeEEeC--CCCCcccHHHHHHHHHH
Confidence 356999999999876666665555 2244443 33334467899988765
No 69
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=31.03 E-value=20 Score=32.17 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=27.7
Q ss_pred hcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCC
Q 017086 296 YGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP 335 (377)
Q Consensus 296 ~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~ 335 (377)
.++|+++||.+.-..+.++|.+.+... .++++.+|
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~-----g~~v~~p~ 279 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR-----GIKFFVPP 279 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH-----TCEEECCC
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc-----CCEEEecC
Confidence 468999999999999999999888654 23566555
No 70
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=30.54 E-value=13 Score=34.02 Aligned_cols=23 Identities=13% Similarity=0.432 Sum_probs=20.5
Q ss_pred cCcccccCCcCCcChHHHHHHHH
Q 017086 297 GNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 297 ~nIil~GG~s~i~gl~~rl~~eL 319 (377)
+.|++|||++.-|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999999988766
No 71
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=29.92 E-value=31 Score=32.58 Aligned_cols=50 Identities=16% Similarity=0.307 Sum_probs=36.5
Q ss_pred cccccCC-cCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 299 IVLSGGS-TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 299 Iil~GG~-s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
|++-||. ..-|.|.+++++.+.+++....+|++... ..++.+||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~---~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLS---EDGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEEC---TTHHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEEC---CCccHHHHHHHHHH
Confidence 4444555 26789999999999988644456766633 56799999998875
No 72
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=28.53 E-value=19 Score=37.37 Aligned_cols=51 Identities=14% Similarity=0.300 Sum_probs=39.9
Q ss_pred cCcccccCCcCC-cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 297 GNIVLSGGSTMF-PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIil~GG~s~i-~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
..|++-||.+.- |.|.+++++.+.++.+. .++++... +-++-+||+++|..
T Consensus 408 ~~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 408 TTVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred eEEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 347777777666 99999999999998754 46777665 56789999999876
No 73
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=27.47 E-value=15 Score=33.62 Aligned_cols=23 Identities=17% Similarity=0.518 Sum_probs=20.2
Q ss_pred cCcccccCCcCCcChHHHHHHHH
Q 017086 297 GNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 297 ~nIil~GG~s~i~gl~~rl~~eL 319 (377)
..|++|||++.-|-|.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999998765
No 74
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=27.23 E-value=33 Score=30.66 Aligned_cols=50 Identities=16% Similarity=0.134 Sum_probs=31.9
Q ss_pred CcccccCCcCC-cChHHHHHHHHHhhC--CC---CceEEEECCCCCccccchhhhhhhc
Q 017086 298 NIVLSGGSTMF-PGIADRMSKEITALA--PS---SMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIil~GG~s~i-~gl~~rl~~eL~~~~--~~---~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+.. +-|.+.+++.+.... +. ...+.+... .. +.-.||+.++.
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-a~~~GAa~la~ 323 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--RH-SSALGGASLGA 323 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--SS-CTHHHHHHHHH
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--CC-ChHHHHHHHHH
Confidence 57888887753 667788888887764 21 223444333 34 78889988764
No 75
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=27.21 E-value=33 Score=31.43 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=36.4
Q ss_pred cCcccccCCcCCcC-hHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 297 GNIVLSGGSTMFPG-IADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIil~GG~s~i~g-l~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|||+||.+...- |.+++++.+.... .+.|........+.-.||+.++..
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcC
Confidence 46999999988766 8899998887664 355654443345677888877654
No 76
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=27.18 E-value=34 Score=32.37 Aligned_cols=22 Identities=14% Similarity=-0.071 Sum_probs=18.4
Q ss_pred ceEEEEeCCCCceEEEEeeCCc
Q 017086 150 TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 150 ~~~lVVDiG~~~t~i~~v~~g~ 171 (377)
.+..|+|+|+++|.|+-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4678999999999999876654
No 77
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=26.32 E-value=53 Score=31.23 Aligned_cols=47 Identities=17% Similarity=0.168 Sum_probs=32.2
Q ss_pred hcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 296 YGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.|+=+-+.+.+.+-+ ..+|.+.... -++-.||+++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~~~---e~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADIL------NRKVIRPVVK---ETTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhc------CCeEEEcCCC---cchHHHHHHHHHH
Confidence 467999999999876666655554 2245554432 3678899998864
No 78
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=24.99 E-value=1.3e+02 Score=26.47 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=36.3
Q ss_pred CcccccCCcCC-cChHHHHHHHHHhhCC-C--CceEEEECCCCCccccchhhhhhhcc
Q 017086 298 NIVLSGGSTMF-PGIADRMSKEITALAP-S--SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIil~GG~s~i-~gl~~rl~~eL~~~~~-~--~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|||.||.+.. +-|.+.+++.+.+... . ...++|..+.-...+.-.||+.++.-
T Consensus 255 ~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~~ 312 (321)
T 3vgl_A 255 AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQ 312 (321)
T ss_dssp EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHHT
T ss_pred EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHHh
Confidence 47888888776 3457888888887664 1 12456665555567788898776543
No 79
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=23.79 E-value=16 Score=32.51 Aligned_cols=52 Identities=13% Similarity=0.225 Sum_probs=30.7
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCC-CCceEEEECCCCCccccchhhhhhh
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAP-SSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~-~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+.+-..+++.+..... ....++|..+.....+.-.||+.++
T Consensus 272 ~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 272 LLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp EEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred EEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 488888887765444445555554432 1124555544444566778988775
No 80
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=23.62 E-value=64 Score=30.63 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=32.2
Q ss_pred cCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 297 GNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+.+-+ ..+|.+.... .++-.||+++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~------g~pV~~~~~~---e~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLL------GVPVAVPEVT---ETTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHh------CCeeEecCCc---ccHHHHHHHHHHh
Confidence 56999999999887776666555 2245554433 3677899998865
No 81
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=23.30 E-value=23 Score=31.01 Aligned_cols=46 Identities=24% Similarity=0.067 Sum_probs=30.0
Q ss_pred CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|+|.||.+..+-|.+++++.+.+. .+.... ...+.-.||+.++..
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~~---~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIISDL---GKRSPEIGAVILAYK 287 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEEEC---CSCCHHHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEeccC---CCCChHHHHHHHHHH
Confidence 4888888876666667777666554 233322 346678899887754
No 82
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=21.34 E-value=23 Score=32.25 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=32.1
Q ss_pred cCCCCeEEeeecccccccc----------------c--------------C----CceEEEEeCCCCceEEEEeeCCccc
Q 017086 128 TFNTPAMYVAIQAVLSLYA----------------S--------------G----RTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 128 ~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~~~lVVDiG~~~t~i~~v~~g~~~ 173 (377)
.+++..|.+.++.-+++++ . | ..+.++|-+|.+ +-...|.+|.+.
T Consensus 126 ~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gii~~g~l~ 204 (373)
T 2q2r_A 126 LFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSLIYYNPPM 204 (373)
T ss_dssp TSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEEEEECC--
T ss_pred hcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEEEecCccc
Confidence 3777458899999988877 2 3 267899999876 556667788765
Q ss_pred c
Q 017086 174 P 174 (377)
Q Consensus 174 ~ 174 (377)
.
T Consensus 205 ~ 205 (373)
T 2q2r_A 205 N 205 (373)
T ss_dssp -
T ss_pred C
Confidence 4
No 83
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=20.57 E-value=70 Score=30.05 Aligned_cols=41 Identities=12% Similarity=0.307 Sum_probs=33.9
Q ss_pred CCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017086 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 307 ~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
..|+|++++++.|+++.|. .+|++..+. -.+-+||+++|..
T Consensus 396 ~~P~f~~~l~~~l~~l~~~-~~v~~~~s~---DGSg~GAAl~AA~ 436 (445)
T 3hm8_A 396 LHPRFSSLVAATVRELAPR-CVVTFLQSE---DGSGKGAALVTAV 436 (445)
T ss_dssp HCTTHHHHHHHHHHHHCTT-EEEEEEECS---SCHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHhCCC-CcEEEEECC---CCchHHHHHHHHH
Confidence 4699999999999999885 467777664 4588999999876
No 84
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=20.14 E-value=65 Score=30.39 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=27.6
Q ss_pred eEEeeecccccccccCCc--eEEEEeCCCCceEEEEe-eCCcc
Q 017086 133 AMYVAIQAVLSLYASGRT--TGIVLDSGDGVSHTVPI-YEGYA 172 (377)
Q Consensus 133 ~v~~~~~~~~a~~~~g~~--~~lVVDiG~~~t~i~~v-~~g~~ 172 (377)
++.++|..+. .+..|.. .-+.||+|++++.+..| .+|..
T Consensus 43 ~~~mlpt~v~-~~P~G~E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 43 SIPMVPGWVL-KQVSGAQAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp SSCCEECCCC-CCCCSCCCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred CCccCccccC-CCCCCCccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 4666666653 3455654 45899999999999988 45655
No 85
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=20.04 E-value=41 Score=31.23 Aligned_cols=27 Identities=26% Similarity=0.186 Sum_probs=19.6
Q ss_pred CCCCCCCCcEEEeCCCCceEEeeeCCC
Q 017086 1 MADTEDIQPLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 1 ~~~~~~~~~vviD~Gs~~~k~G~~~~~ 27 (377)
|++....+.+||..||+++|+++...+
T Consensus 12 ~~~~~~~~ILviN~GSSS~K~~lf~~~ 38 (415)
T 2e1z_A 12 MASNEFPVVLVINCGSSSIKFSVLDVA 38 (415)
T ss_dssp -----CCEEEEEEECSSEEEEEEEETT
T ss_pred cccCCCCeEEEEECCchhheEEEEECC
Confidence 667778889999999999999998643
Done!